BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048138
(182 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356537505|ref|XP_003537267.1| PREDICTED: LOW QUALITY PROTEIN: apurinic endonuclease-redox
protein-like [Glycine max]
Length = 543
Score = 338 bits (867), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 154/182 (84%), Positives = 170/182 (93%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPLSV YGLGISDHDSEGRLVTAEFD+F+L+ YVPNSGDGL+RLSYR+TEWDPSLS+Y
Sbjct: 362 IKPLSVRYGLGISDHDSEGRLVTAEFDTFYLICGYVPNSGDGLKRLSYRVTEWDPSLSNY 421
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+KELEK KPVILTGDLNCAH+EIDIYNPAGN+RSAG TDEER+SF NFLS+GFVDTFR
Sbjct: 422 LKELEKSKPVILTGDLNCAHEEIDIYNPAGNKRSAGLTDEERKSFATNFLSRGFVDTFRR 481
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH GV+GYTYWGYRHGGRK NRGWRLDYFLVS+S+ADK HDSYILPDVTGSDH PIGL++
Sbjct: 482 QHPGVIGYTYWGYRHGGRKFNRGWRLDYFLVSESIADKVHDSYILPDVTGSDHCPIGLVV 541
Query: 181 KL 182
KL
Sbjct: 542 KL 543
>gi|356498631|ref|XP_003518153.1| PREDICTED: apurinic endonuclease-redox protein-like [Glycine max]
Length = 507
Score = 338 bits (867), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 154/182 (84%), Positives = 170/182 (93%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPLSV YGLGI DHDSEGRLVTAEFD+F+L+ YVPNSGDGL+RLSYR+TEWDPSLS+Y
Sbjct: 326 IKPLSVRYGLGIPDHDSEGRLVTAEFDTFYLICGYVPNSGDGLKRLSYRVTEWDPSLSNY 385
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+KELEK KPVILTGDLNCAH+EIDIYNPAGN+RSAGFTDEER+SF NFLS+GFVDTFR
Sbjct: 386 LKELEKSKPVILTGDLNCAHEEIDIYNPAGNKRSAGFTDEERKSFAKNFLSRGFVDTFRR 445
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH GV+GYTYWGYRHGGRK NRGWRLDYFLVS+S+ADK HDSYILPDVTGSDH PIGL++
Sbjct: 446 QHPGVIGYTYWGYRHGGRKFNRGWRLDYFLVSESIADKVHDSYILPDVTGSDHCPIGLVV 505
Query: 181 KL 182
KL
Sbjct: 506 KL 507
>gi|224137778|ref|XP_002322649.1| predicted protein [Populus trichocarpa]
gi|222867279|gb|EEF04410.1| predicted protein [Populus trichocarpa]
Length = 428
Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 153/182 (84%), Positives = 171/182 (93%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPLSV YGLGI DHDSEGR+VTAEFDSF+L++ YVPNSGDGL+RLSYRIT+WDPSLS+Y
Sbjct: 247 IKPLSVCYGLGIPDHDSEGRVVTAEFDSFYLVNTYVPNSGDGLKRLSYRITQWDPSLSNY 306
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+KELEK KPVILTGDLNCAHQEIDI+NPAGN+RSAGFT+EERQSFG+NFLSKG VDTFR
Sbjct: 307 MKELEKSKPVILTGDLNCAHQEIDIFNPAGNKRSAGFTEEERQSFGSNFLSKGLVDTFRK 366
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH VVGYTYWGYRHGGRKTN+GWRLDYFLVS+S+ADK HDSYI+PDV GSDH PIGL+L
Sbjct: 367 QHPNVVGYTYWGYRHGGRKTNKGWRLDYFLVSESIADKVHDSYIVPDVNGSDHCPIGLVL 426
Query: 181 KL 182
K+
Sbjct: 427 KV 428
>gi|255578467|ref|XP_002530098.1| ap endonuclease, putative [Ricinus communis]
gi|223530409|gb|EEF32297.1| ap endonuclease, putative [Ricinus communis]
Length = 486
Score = 333 bits (855), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 149/182 (81%), Positives = 171/182 (93%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLSV+YGLGI+DHDSEGRLVTAEFDSF+LL+ YVPNSGDGL+RLSYR+++WD SLS+Y
Sbjct: 305 VKPLSVSYGLGIADHDSEGRLVTAEFDSFYLLNAYVPNSGDGLKRLSYRVSQWDLSLSNY 364
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+KELEK KPVIL GDLNCAHQEIDIYNPAGNRR+AGFTDEERQSF NFLS+GFVD+FR
Sbjct: 365 MKELEKSKPVILNGDLNCAHQEIDIYNPAGNRRNAGFTDEERQSFETNFLSRGFVDSFRK 424
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH VVGYTYWGYRHGGRKTN+GWRLDYFLVS+S++D+ HDSYI+PDVTGSDH PIGL+L
Sbjct: 425 QHPDVVGYTYWGYRHGGRKTNKGWRLDYFLVSESISDQVHDSYIVPDVTGSDHCPIGLVL 484
Query: 181 KL 182
K+
Sbjct: 485 KV 486
>gi|449437801|ref|XP_004136679.1| PREDICTED: apurinic endonuclease-redox protein-like [Cucumis
sativus]
Length = 501
Score = 328 bits (842), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 149/182 (81%), Positives = 166/182 (91%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP+SV YGLGIS+HD EGR+V EFDSFFLL+ YVPNSGDGL+RLSYRIT+WDPSLS+Y
Sbjct: 320 IKPISVRYGLGISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNY 379
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+KELEK KPVILTGDLNCAHQEID+YNPAGNR+SAGFT+EERQSF NFL KGFVDTFR
Sbjct: 380 IKELEKSKPVILTGDLNCAHQEIDLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQ 439
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+H VVGYTYWGYRHGGRKTN+GWRLDYFLVS+ +A+K HDSYILPDV GSDH PIGL+L
Sbjct: 440 KHPDVVGYTYWGYRHGGRKTNKGWRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVL 499
Query: 181 KL 182
KL
Sbjct: 500 KL 501
>gi|297739882|emb|CBI30064.3| unnamed protein product [Vitis vinifera]
Length = 542
Score = 328 bits (840), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 150/182 (82%), Positives = 168/182 (92%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPLSV YGLGISDHDSEGRL+TAEF+SF+LLS YVPNSGDGL+RLSYR+T+WD +L SY
Sbjct: 361 IKPLSVRYGLGISDHDSEGRLLTAEFESFYLLSGYVPNSGDGLKRLSYRVTQWDSALGSY 420
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+KELEK KPVILTGDLNCAHQEIDI++PAGNRRSAGFTDEERQS NFLSKGFVD+FR
Sbjct: 421 MKELEKSKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTDEERQSLEKNFLSKGFVDSFRK 480
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH GVVGYTYWGYR+G RK+N+GWRLDYFLVS+S+ADK HDSYILPD+ GSDH PIGL+L
Sbjct: 481 QHPGVVGYTYWGYRNGCRKSNKGWRLDYFLVSESIADKVHDSYILPDIGGSDHCPIGLVL 540
Query: 181 KL 182
KL
Sbjct: 541 KL 542
>gi|359482196|ref|XP_002274714.2| PREDICTED: apurinic endonuclease-redox protein-like [Vitis
vinifera]
Length = 479
Score = 328 bits (840), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 150/182 (82%), Positives = 168/182 (92%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPLSV YGLGISDHDSEGRL+TAEF+SF+LLS YVPNSGDGL+RLSYR+T+WD +L SY
Sbjct: 298 IKPLSVRYGLGISDHDSEGRLLTAEFESFYLLSGYVPNSGDGLKRLSYRVTQWDSALGSY 357
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+KELEK KPVILTGDLNCAHQEIDI++PAGNRRSAGFTDEERQS NFLSKGFVD+FR
Sbjct: 358 MKELEKSKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTDEERQSLEKNFLSKGFVDSFRK 417
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH GVVGYTYWGYR+G RK+N+GWRLDYFLVS+S+ADK HDSYILPD+ GSDH PIGL+L
Sbjct: 418 QHPGVVGYTYWGYRNGCRKSNKGWRLDYFLVSESIADKVHDSYILPDIGGSDHCPIGLVL 477
Query: 181 KL 182
KL
Sbjct: 478 KL 479
>gi|413952189|gb|AFW84838.1| hypothetical protein ZEAMMB73_201373 [Zea mays]
Length = 530
Score = 327 bits (839), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 142/182 (78%), Positives = 166/182 (91%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLS+ YGLGISDHD+EGR+VT EFD F+LL+ YVPNSGDGL+RL+YR+TEWDPSL +Y
Sbjct: 349 VKPLSIKYGLGISDHDTEGRVVTVEFDDFYLLTAYVPNSGDGLKRLTYRVTEWDPSLGNY 408
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+KELEK KPVILTGDLNCAHQEIDI++PAGNRRSAGFT+EER+SFG NFLSKGFVDTFR
Sbjct: 409 MKELEKSKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTNEERESFGTNFLSKGFVDTFRK 468
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH VV Y+YWGYRH RKTN+GWRLDYFLVS+S+ +K HDSYILPD++ SDHSP+GL+L
Sbjct: 469 QHPNVVAYSYWGYRHNARKTNKGWRLDYFLVSESITEKVHDSYILPDISASDHSPLGLVL 528
Query: 181 KL 182
KL
Sbjct: 529 KL 530
>gi|170665740|gb|ACB29409.1| apurinic endonuclease-redox protein [Arabidopsis thaliana]
Length = 538
Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 149/184 (80%), Positives = 168/184 (91%), Gaps = 2/184 (1%)
Query: 1 IKPLSVTYGLGIS--DHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLS 58
IKPLSV YG G+S DHD+EGR+VTAEFDSF+L++ YVPNSGDGL+RLSYRI EWD +LS
Sbjct: 355 IKPLSVRYGTGLSGSDHDTEGRIVTAEFDSFYLINTYVPNSGDGLKRLSYRIEEWDRTLS 414
Query: 59 SYVKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTF 118
+++KELEK KPV+LTGDLNCAH+EIDI+NPAGN+RSAGFT+EERQSFGANFL KGFVDTF
Sbjct: 415 NHIKELEKSKPVVLTGDLNCAHEEIDIFNPAGNKRSAGFTEEERQSFGANFLDKGFVDTF 474
Query: 119 RAQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
R QH GVVGYTYWGYRHGGRKTN+GWRLDYFLVSQS+A HDSYILPD+ GSDH PIGL
Sbjct: 475 RKQHPGVVGYTYWGYRHGGRKTNKGWRLDYFLVSQSIAANVHDSYILPDINGSDHCPIGL 534
Query: 179 ILKL 182
ILKL
Sbjct: 535 ILKL 538
>gi|226529129|ref|NP_001146906.1| LOC100280514 [Zea mays]
gi|195604980|gb|ACG24320.1| apurinic endonuclease-redox protein [Zea mays]
Length = 510
Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 142/182 (78%), Positives = 166/182 (91%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLS+ YGLGI DHD+EGR+VT EFD F+LL+ YVPNSGDGL+RL+YR+TEWDPSL +Y
Sbjct: 329 VKPLSIKYGLGIPDHDTEGRVVTVEFDDFYLLTAYVPNSGDGLKRLTYRVTEWDPSLGNY 388
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+KELEK KPVILTGDLNCAHQEIDI++PAGNRRSAGFT+EER+SFG NFLSKGFVDTFR
Sbjct: 389 MKELEKSKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTNEERESFGTNFLSKGFVDTFRK 448
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH VV Y+YWGYRH RKTN+GWRLDYFLVS+S+A+K HDSYILPD++ SDHSP+GL+L
Sbjct: 449 QHPNVVAYSYWGYRHNARKTNKGWRLDYFLVSESIAEKVHDSYILPDISASDHSPLGLVL 508
Query: 181 KL 182
KL
Sbjct: 509 KL 510
>gi|195604738|gb|ACG24199.1| apurinic endonuclease-redox protein [Zea mays]
Length = 505
Score = 326 bits (835), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 142/182 (78%), Positives = 166/182 (91%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLS+ YGLGI DHD+EGR+VT EFD F+LL+ YVPNSGDGL+RL+YR+TEWDPSL +Y
Sbjct: 324 VKPLSIKYGLGIPDHDTEGRVVTVEFDDFYLLTAYVPNSGDGLKRLTYRVTEWDPSLGNY 383
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+KELEK KPVILTGDLNCAHQEIDI++PAGNRRSAGFT+EER+SFG NFLSKGFVDTFR
Sbjct: 384 MKELEKSKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTNEERESFGTNFLSKGFVDTFRK 443
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH VV Y+YWGYRH RKTN+GWRLDYFLVS+S+A+K HDSYILPD++ SDHSP+GL+L
Sbjct: 444 QHPNVVAYSYWGYRHNARKTNKGWRLDYFLVSESIAEKVHDSYILPDISASDHSPLGLVL 503
Query: 181 KL 182
KL
Sbjct: 504 KL 505
>gi|449494709|ref|XP_004159624.1| PREDICTED: LOW QUALITY PROTEIN: apurinic endonuclease-redox
protein-like [Cucumis sativus]
Length = 501
Score = 325 bits (834), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 148/182 (81%), Positives = 165/182 (90%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP+SV YGLGIS+HD EGR+V EFDSF LL+ YVPNSGDGL+RLSYRIT+WDPSLS+Y
Sbjct: 320 IKPISVRYGLGISEHDGEGRVVMVEFDSFXLLNVYVPNSGDGLKRLSYRITQWDPSLSNY 379
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+KELEK KPVILTGDLNCAHQEID+YNPAGNR+SAGFT+EERQSF NFL KGFVDTFR
Sbjct: 380 IKELEKSKPVILTGDLNCAHQEIDLYNPAGNRKSAGFTNEERQSFETNFLQKGFVDTFRQ 439
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+H VVGYTYWGYRHGGRKTN+GWRLDYFLVS+ +A+K HDSYILPDV GSDH PIGL+L
Sbjct: 440 KHPDVVGYTYWGYRHGGRKTNKGWRLDYFLVSERVAEKVHDSYILPDVGGSDHCPIGLVL 499
Query: 181 KL 182
KL
Sbjct: 500 KL 501
>gi|219884049|gb|ACL52399.1| unknown [Zea mays]
Length = 493
Score = 325 bits (834), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 141/182 (77%), Positives = 166/182 (91%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLS+ YGLGISDHD+EGR+VT EFD F+LL+ YVPNSGDGL+RL+YR+TEWDPSL +Y
Sbjct: 312 VKPLSIKYGLGISDHDTEGRVVTVEFDDFYLLTAYVPNSGDGLKRLTYRVTEWDPSLGNY 371
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+KELEK KPVILTGDLNCAHQEIDI++PAG+RRSAGFT+EER+SFG NFLSKGFVDTFR
Sbjct: 372 MKELEKSKPVILTGDLNCAHQEIDIHDPAGDRRSAGFTNEERESFGTNFLSKGFVDTFRK 431
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH VV Y+YWGYRH RKTN+GWRLDYFLVS+S+ +K HDSYILPD++ SDHSP+GL+L
Sbjct: 432 QHPNVVAYSYWGYRHNARKTNKGWRLDYFLVSESITEKVHDSYILPDISASDHSPLGLVL 491
Query: 181 KL 182
KL
Sbjct: 492 KL 493
>gi|15227354|ref|NP_181677.1| apurinic endonuclease-redox protein [Arabidopsis thaliana]
gi|8488963|sp|P45951.2|ARP_ARATH RecName: Full=Apurinic endonuclease-redox protein; AltName:
Full=DNA-(apurinic or apyrimidinic site) lyase
gi|3241944|gb|AAC23731.1| DNA-(apurinic or apyrimidinic site) lyase (ARP) [Arabidopsis
thaliana]
gi|330254890|gb|AEC09984.1| apurinic endonuclease-redox protein [Arabidopsis thaliana]
Length = 536
Score = 325 bits (832), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 147/182 (80%), Positives = 165/182 (90%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPLSV YG G+S HD+EGR+VTAEFDSF+L++ YVPNSGDGL+RLSYRI EWD +LS++
Sbjct: 355 IKPLSVRYGTGLSGHDTEGRIVTAEFDSFYLINTYVPNSGDGLKRLSYRIEEWDRTLSNH 414
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+KELEK KPV+LTGDLNCAH+EIDI+NPAGN+RSAGFT EERQSFGAN L KGFVDTFR
Sbjct: 415 IKELEKSKPVVLTGDLNCAHEEIDIFNPAGNKRSAGFTIEERQSFGANLLDKGFVDTFRK 474
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH GVVGYTYWGYRHGGRKTN+GWRLDYFLVSQS+A HDSYILPD+ GSDH PIGLIL
Sbjct: 475 QHPGVVGYTYWGYRHGGRKTNKGWRLDYFLVSQSIAANVHDSYILPDINGSDHCPIGLIL 534
Query: 181 KL 182
KL
Sbjct: 535 KL 536
>gi|472869|emb|CAA54234.1| ARP protein [Arabidopsis thaliana]
Length = 527
Score = 325 bits (832), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 147/182 (80%), Positives = 165/182 (90%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPLSV YG G+S HD+EGR+VTAEFDSF+L++ YVPNSGDGL+RLSYRI EWD +LS++
Sbjct: 346 IKPLSVRYGTGLSGHDTEGRIVTAEFDSFYLINTYVPNSGDGLKRLSYRIEEWDRTLSNH 405
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+KELEK KPV+LTGDLNCAH+EIDI+NPAGN+RSAGFT EERQSFGAN L KGFVDTFR
Sbjct: 406 IKELEKSKPVVLTGDLNCAHEEIDIFNPAGNKRSAGFTIEERQSFGANLLDKGFVDTFRK 465
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH GVVGYTYWGYRHGGRKTN+GWRLDYFLVSQS+A HDSYILPD+ GSDH PIGLIL
Sbjct: 466 QHPGVVGYTYWGYRHGGRKTNKGWRLDYFLVSQSIAANVHDSYILPDINGSDHCPIGLIL 525
Query: 181 KL 182
KL
Sbjct: 526 KL 527
>gi|297824099|ref|XP_002879932.1| apurinic endonuclease-redox protein [Arabidopsis lyrata subsp.
lyrata]
gi|297325771|gb|EFH56191.1| apurinic endonuclease-redox protein [Arabidopsis lyrata subsp.
lyrata]
Length = 550
Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 148/184 (80%), Positives = 166/184 (90%), Gaps = 2/184 (1%)
Query: 1 IKPLSVTYGLGIS--DHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLS 58
IKPLSV YG G+S DHD EGR+VTAEFDSF+L++ YVPNSGDGL+RLSYRI EWD +LS
Sbjct: 367 IKPLSVRYGTGLSGSDHDMEGRIVTAEFDSFYLINTYVPNSGDGLKRLSYRIEEWDRTLS 426
Query: 59 SYVKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTF 118
+++KELEK KPV+LTGDLNCAH+EIDI+NPAGN+R+AGFT EERQSFGANFL KGFVDTF
Sbjct: 427 NHIKELEKSKPVVLTGDLNCAHEEIDIFNPAGNKRNAGFTIEERQSFGANFLDKGFVDTF 486
Query: 119 RAQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
R QH GVVGYTYWGYRHGGRKTNRGWRLDYFLVS+S+A HDSYILPD+ GSDH PIGL
Sbjct: 487 RKQHPGVVGYTYWGYRHGGRKTNRGWRLDYFLVSESIAANVHDSYILPDINGSDHCPIGL 546
Query: 179 ILKL 182
ILKL
Sbjct: 547 ILKL 550
>gi|242054695|ref|XP_002456493.1| hypothetical protein SORBIDRAFT_03g037240 [Sorghum bicolor]
gi|241928468|gb|EES01613.1| hypothetical protein SORBIDRAFT_03g037240 [Sorghum bicolor]
Length = 511
Score = 322 bits (826), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 140/182 (76%), Positives = 165/182 (90%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLS+ YGLGI DHD+EGR+VT EFD F+LL+ YVPNSGDGL+RL+YR+TEWDPSL +Y
Sbjct: 330 VKPLSIKYGLGIPDHDTEGRVVTVEFDDFYLLTAYVPNSGDGLKRLTYRVTEWDPSLGNY 389
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+KELEK KPVILTGDLNCAHQEIDI++PAGNR+SAGFT+EER+SF NFLSKGFVDTFR
Sbjct: 390 MKELEKSKPVILTGDLNCAHQEIDIHDPAGNRKSAGFTNEERESFETNFLSKGFVDTFRK 449
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH VV Y+YWGYRH RKTN+GWRLDYFLVS+S+A+K HDSYILPD++ SDHSP+GL+L
Sbjct: 450 QHPSVVAYSYWGYRHNARKTNKGWRLDYFLVSESIAEKVHDSYILPDISASDHSPLGLVL 509
Query: 181 KL 182
KL
Sbjct: 510 KL 511
>gi|357125452|ref|XP_003564408.1| PREDICTED: apurinic endonuclease-redox protein-like isoform 1
[Brachypodium distachyon]
Length = 516
Score = 321 bits (822), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 140/182 (76%), Positives = 164/182 (90%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLS+ YGLG+ DHD+EGR+VT EFD F+LL+ YVPNSGDGLRRL+YR+TEWDP L +Y
Sbjct: 335 VKPLSIKYGLGVPDHDTEGRVVTVEFDDFYLLTAYVPNSGDGLRRLTYRVTEWDPCLGNY 394
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+KELEK KPVILTGDLNCAHQEIDI++PAGNRRSAGFT EER+SF NFLSKGFVDTFR
Sbjct: 395 MKELEKSKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTKEERESFETNFLSKGFVDTFRK 454
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH VVGY+YWGYRH RKTN+GWRLDYFLVS+S+A++ HDSYILPD++ SDHSP+GL+L
Sbjct: 455 QHPDVVGYSYWGYRHNARKTNKGWRLDYFLVSESIAERVHDSYILPDISASDHSPLGLVL 514
Query: 181 KL 182
KL
Sbjct: 515 KL 516
>gi|357125454|ref|XP_003564409.1| PREDICTED: apurinic endonuclease-redox protein-like isoform 2
[Brachypodium distachyon]
Length = 493
Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 140/182 (76%), Positives = 164/182 (90%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLS+ YGLG+ DHD+EGR+VT EFD F+LL+ YVPNSGDGLRRL+YR+TEWDP L +Y
Sbjct: 312 VKPLSIKYGLGVPDHDTEGRVVTVEFDDFYLLTAYVPNSGDGLRRLTYRVTEWDPCLGNY 371
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+KELEK KPVILTGDLNCAHQEIDI++PAGNRRSAGFT EER+SF NFLSKGFVDTFR
Sbjct: 372 MKELEKSKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTKEERESFETNFLSKGFVDTFRK 431
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH VVGY+YWGYRH RKTN+GWRLDYFLVS+S+A++ HDSYILPD++ SDHSP+GL+L
Sbjct: 432 QHPDVVGYSYWGYRHNARKTNKGWRLDYFLVSESIAERVHDSYILPDISASDHSPLGLVL 491
Query: 181 KL 182
KL
Sbjct: 492 KL 493
>gi|326523229|dbj|BAJ88655.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 318 bits (816), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 141/182 (77%), Positives = 163/182 (89%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLS+ YGLG+ DHD+EGR+VT EFD F+LL+ YVPNSGDGL+RL+YR+TEWDP L +Y
Sbjct: 350 VKPLSIKYGLGVPDHDTEGRIVTVEFDDFYLLTAYVPNSGDGLKRLTYRVTEWDPCLGNY 409
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+KELEK KPVILTGDLNCAHQEIDI++PAGN RSAGFT EER+SF NFLSKGFVDTFR
Sbjct: 410 MKELEKSKPVILTGDLNCAHQEIDIHDPAGNSRSAGFTKEERKSFETNFLSKGFVDTFRK 469
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH VVGY+YWGYRH RKTNRGWRLDYFLVS+S+A++ HDSYILPDV+ SDHSP+GLIL
Sbjct: 470 QHPDVVGYSYWGYRHNCRKTNRGWRLDYFLVSESIAERIHDSYILPDVSASDHSPLGLIL 529
Query: 181 KL 182
KL
Sbjct: 530 KL 531
>gi|115440515|ref|NP_001044537.1| Os01g0801000 [Oryza sativa Japonica Group]
gi|55296319|dbj|BAD68137.1| putative DNA-(apurinic or apyrimidinic site) lyase (ARP) [Oryza
sativa Japonica Group]
gi|55297696|dbj|BAD68286.1| putative DNA-(apurinic or apyrimidinic site) lyase (ARP) [Oryza
sativa Japonica Group]
gi|113534068|dbj|BAF06451.1| Os01g0801000 [Oryza sativa Japonica Group]
gi|215715310|dbj|BAG95061.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619408|gb|EEE55540.1| hypothetical protein OsJ_03774 [Oryza sativa Japonica Group]
Length = 499
Score = 316 bits (809), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 137/182 (75%), Positives = 165/182 (90%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLS+ YGLG+ DHD+EGR+VT EF+ F+LL+ YVPNSGDGL+RL+YR+TEWDPSL +Y
Sbjct: 318 VKPLSIKYGLGVPDHDTEGRVVTVEFNDFYLLTAYVPNSGDGLKRLTYRVTEWDPSLGNY 377
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K+LEK KPVILTGDLNCAHQEIDI++PAGNRRSAGFT EER+SF NFLSKGFVDTFR
Sbjct: 378 MKDLEKSKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTIEERESFETNFLSKGFVDTFRK 437
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH VVGY+YWGYRH RKTN+GWRLDYFLVS+S+A++ HDSYI+PD++ SDHSP+GL+L
Sbjct: 438 QHPNVVGYSYWGYRHNARKTNKGWRLDYFLVSESIAERVHDSYIIPDISASDHSPLGLVL 497
Query: 181 KL 182
KL
Sbjct: 498 KL 499
>gi|218189226|gb|EEC71653.1| hypothetical protein OsI_04096 [Oryza sativa Indica Group]
Length = 499
Score = 316 bits (809), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 137/182 (75%), Positives = 165/182 (90%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLS+ YGLG+ DHD+EGR+VT EF+ F+LL+ YVPNSGDGL+RL+YR+TEWDPSL +Y
Sbjct: 318 VKPLSIKYGLGVPDHDTEGRVVTVEFNDFYLLTAYVPNSGDGLKRLTYRVTEWDPSLGNY 377
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K+LEK KPVILTGDLNCAHQEIDI++PAGNRRSAGFT EER+SF NFLSKGFVDTFR
Sbjct: 378 MKDLEKSKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTIEERESFETNFLSKGFVDTFRK 437
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH VVGY+YWGYRH RKTN+GWRLDYFLVS+S+A++ HDSYI+PD++ SDHSP+GL+L
Sbjct: 438 QHPNVVGYSYWGYRHNARKTNKGWRLDYFLVSESIAERVHDSYIIPDISASDHSPLGLVL 497
Query: 181 KL 182
KL
Sbjct: 498 KL 499
>gi|413952188|gb|AFW84837.1| hypothetical protein ZEAMMB73_201373 [Zea mays]
Length = 516
Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 131/182 (71%), Positives = 153/182 (84%), Gaps = 14/182 (7%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLS+ YGLGISDHD+EGR+VT EFD F+LL+ YVPNSGDGL+RL+YR+TEWDPSL +Y
Sbjct: 349 VKPLSIKYGLGISDHDTEGRVVTVEFDDFYLLTAYVPNSGDGLKRLTYRVTEWDPSLGNY 408
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+KELEK KPVILTGDLNCAHQEIDI++PAGNRRSAGFT+EER+SFG NFLSKGFVDTFR
Sbjct: 409 MKELEKSKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTNEERESFGTNFLSKGFVDTFRK 468
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH VV Y+YWGYRH RKTN+ +K HDSYILPD++ SDHSP+GL+L
Sbjct: 469 QHPNVVAYSYWGYRHNARKTNK--------------EKVHDSYILPDISASDHSPLGLVL 514
Query: 181 KL 182
KL
Sbjct: 515 KL 516
>gi|168036056|ref|XP_001770524.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678232|gb|EDQ64693.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 363
Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 126/182 (69%), Positives = 147/182 (80%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP+SV YGLGI +HD EGRL+T EFD+F+ + YVPNSG L RL+YR EWD +LSS+
Sbjct: 182 IKPISVQYGLGIPNHDQEGRLITCEFDTFYFVVSYVPNSGAKLERLAYRTQEWDVALSSH 241
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++ELEKKKPVILTGDLNCAH++IDI +PAGNR+SAGFTDEER+SF NFL GFVDTFR
Sbjct: 242 LRELEKKKPVILTGDLNCAHEDIDINDPAGNRKSAGFTDEERESFKTNFLDHGFVDTFRK 301
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH V YTYWGYR R N+GWRLDYFLVS SL++ HDSY +PDV GSDH PI LIL
Sbjct: 302 QHPNAVAYTYWGYRTASRPKNKGWRLDYFLVSGSLSENVHDSYTIPDVGGSDHCPIALIL 361
Query: 181 KL 182
K+
Sbjct: 362 KI 363
>gi|302783529|ref|XP_002973537.1| hypothetical protein SELMODRAFT_99746 [Selaginella moellendorffii]
gi|300158575|gb|EFJ25197.1| hypothetical protein SELMODRAFT_99746 [Selaginella moellendorffii]
Length = 306
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/181 (70%), Positives = 146/181 (80%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPLSVTYGLGIS HD EGR+VTAEFD+FFL+S YVPNSG L RL+YR TEWDP+ S+Y
Sbjct: 123 IKPLSVTYGLGISQHDGEGRVVTAEFDTFFLVSVYVPNSGQRLERLTYRTTEWDPAFSTY 182
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ ELEK+KPVI+TGDLNCAH+EIDIY+P GN+RSAGFT EER SF NF+ KG VDTFR
Sbjct: 183 LLELEKRKPVIVTGDLNCAHEEIDIYDPDGNKRSAGFTSEERTSFQTNFIDKGLVDTFRK 242
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH VG+TYW YR R N+GWRLDYFLVSQ L DSY+LP + GSDH PIGLI+
Sbjct: 243 QHPLAVGFTYWSYRSNARPQNKGWRLDYFLVSQGLVCSVADSYVLPQLDGSDHCPIGLII 302
Query: 181 K 181
+
Sbjct: 303 Q 303
>gi|302787589|ref|XP_002975564.1| hypothetical protein SELMODRAFT_103806 [Selaginella moellendorffii]
gi|300156565|gb|EFJ23193.1| hypothetical protein SELMODRAFT_103806 [Selaginella moellendorffii]
Length = 306
Score = 275 bits (704), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 126/181 (69%), Positives = 146/181 (80%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP+SVTYGLGIS HD EGR+VTAEFD+FFL+S YVPNSG L RL+YR TEWDP+ S+Y
Sbjct: 123 IKPVSVTYGLGISQHDGEGRVVTAEFDTFFLVSVYVPNSGQRLERLTYRTTEWDPAFSTY 182
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ ELEK+KPVI+TGDLNCAH+EIDIY+P GN+RSAGFT EER SF NF+ KG VDTFR
Sbjct: 183 LLELEKRKPVIVTGDLNCAHEEIDIYDPDGNKRSAGFTCEERTSFQTNFIDKGLVDTFRK 242
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH VG+TYW YR R N+GWRLDYFLVSQ L DSY+LP + GSDH PIGLI+
Sbjct: 243 QHPLAVGFTYWSYRSNARPQNKGWRLDYFLVSQGLVSNVADSYVLPQLDGSDHCPIGLII 302
Query: 181 K 181
+
Sbjct: 303 Q 303
>gi|115440517|ref|NP_001044538.1| Os01g0801100 [Oryza sativa Japonica Group]
gi|113534069|dbj|BAF06452.1| Os01g0801100 [Oryza sativa Japonica Group]
Length = 310
Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 120/182 (65%), Positives = 142/182 (78%), Gaps = 2/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KP+SV YG+GI +HD EGR++T EFD F+L++ YVPNSG LRRL+YR+ WDP S+Y
Sbjct: 131 VKPISVQYGIGIREHDHEGRVITLEFDGFYLVNAYVPNSGRFLRRLNYRVNNWDPCFSNY 190
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK LEK KPVI+ GDLNCA Q IDI+NP +SAGFT EER+SF NF SKG VDTFR
Sbjct: 191 VKILEKSKPVIVAGDLNCARQSIDIHNPPAKTKSAGFTIEERESFETNFSSKGLVDTFRK 250
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH VGYT+WG R TN+GWRLDYFL S+S+ DK HDSYILPDV+ SDHSPIGL+L
Sbjct: 251 QHPNAVGYTFWG--ENQRITNKGWRLDYFLASESITDKVHDSYILPDVSFSDHSPIGLVL 308
Query: 181 KL 182
KL
Sbjct: 309 KL 310
>gi|218189227|gb|EEC71654.1| hypothetical protein OsI_04097 [Oryza sativa Indica Group]
Length = 321
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 120/182 (65%), Positives = 142/182 (78%), Gaps = 2/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KP+SV YG+GI +HD EGR++T EFD F+L++ YVPNSG LRRL+YR+ WDP S+Y
Sbjct: 142 VKPISVQYGIGIREHDHEGRVITLEFDGFYLVNAYVPNSGRFLRRLNYRVNNWDPCFSNY 201
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK LEK KPVI+ GDLNCA Q IDI+NP +SAGFT EER+SF NF SKG VDTFR
Sbjct: 202 VKILEKSKPVIVAGDLNCARQSIDIHNPPAKTKSAGFTIEERESFETNFSSKGLVDTFRK 261
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH VGYT+WG R TN+GWRLDYFL S+S+ DK HDSYILPDV+ SDHSPIGL+L
Sbjct: 262 QHPNAVGYTFWG--ENQRITNKGWRLDYFLASESITDKVHDSYILPDVSFSDHSPIGLVL 319
Query: 181 KL 182
KL
Sbjct: 320 KL 321
>gi|55296320|dbj|BAD68138.1| putative DNA-(apurinic or apyrimidinic site) lyase (ARP) [Oryza
sativa Japonica Group]
gi|55297697|dbj|BAD68287.1| putative DNA-(apurinic or apyrimidinic site) lyase (ARP) [Oryza
sativa Japonica Group]
Length = 307
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 120/182 (65%), Positives = 142/182 (78%), Gaps = 2/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KP+SV YG+GI +HD EGR++T EFD F+L++ YVPNSG LRRL+YR+ WDP S+Y
Sbjct: 128 VKPISVQYGIGIREHDHEGRVITLEFDGFYLVNAYVPNSGRFLRRLNYRVNNWDPCFSNY 187
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK LEK KPVI+ GDLNCA Q IDI+NP +SAGFT EER+SF NF SKG VDTFR
Sbjct: 188 VKILEKSKPVIVAGDLNCARQSIDIHNPPAKTKSAGFTIEERESFETNFSSKGLVDTFRK 247
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH VGYT+WG R TN+GWRLDYFL S+S+ DK HDSYILPDV+ SDHSPIGL+L
Sbjct: 248 QHPNAVGYTFWG--ENQRITNKGWRLDYFLASESITDKVHDSYILPDVSFSDHSPIGLVL 305
Query: 181 KL 182
KL
Sbjct: 306 KL 307
>gi|212274573|ref|NP_001130149.1| uncharacterized protein LOC100191243 [Zea mays]
gi|194688404|gb|ACF78286.1| unknown [Zea mays]
Length = 323
Score = 254 bits (649), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 117/182 (64%), Positives = 139/182 (76%), Gaps = 2/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++P+SV YGLGI +HD EGRL+T EFD F+L++ YVPNSG GLRRL+YRI +WDP S +
Sbjct: 144 VQPISVQYGLGIPEHDQEGRLITLEFDDFYLVNAYVPNSGRGLRRLNYRINDWDPCFSDF 203
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K+LE KPVI+ GDLNCA Q IDI+NP +AGFT EER+SF NF KG VDTFR
Sbjct: 204 IKKLECSKPVIVAGDLNCARQSIDIHNPQAKTEAAGFTIEERESFEVNFSRKGLVDTFRK 263
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH V YT+WG R TN+GWRLDYFL S+S+ADK HDSY LPDV SDHSPIGL+L
Sbjct: 264 QHPNAVAYTFWG--ENQRITNKGWRLDYFLASESIADKVHDSYTLPDVALSDHSPIGLLL 321
Query: 181 KL 182
KL
Sbjct: 322 KL 323
>gi|195620624|gb|ACG32142.1| hypothetical protein [Zea mays]
Length = 304
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 117/182 (64%), Positives = 139/182 (76%), Gaps = 2/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++P+SV YGLGI +HD EGRL+T EFD F+L++ YVPNSG GLRRL+YRI +WDP S +
Sbjct: 125 VQPISVQYGLGIPEHDQEGRLITLEFDDFYLVNAYVPNSGRGLRRLNYRINDWDPCFSDF 184
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K+LE KPVI+ GDLNCA Q IDI+NP +AGFT EER+SF NF KG VDTFR
Sbjct: 185 IKKLECSKPVIVAGDLNCARQSIDIHNPQAKTEAAGFTIEERESFEVNFSRKGLVDTFRK 244
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH V YT+WG R TN+GWRLDYFL S+S+ADK HDSY LPDV SDHSPIGL+L
Sbjct: 245 QHPNAVAYTFWG--ENQRITNKGWRLDYFLASESIADKVHDSYTLPDVALSDHSPIGLLL 302
Query: 181 KL 182
KL
Sbjct: 303 KL 304
>gi|242054697|ref|XP_002456494.1| hypothetical protein SORBIDRAFT_03g037250 [Sorghum bicolor]
gi|241928469|gb|EES01614.1| hypothetical protein SORBIDRAFT_03g037250 [Sorghum bicolor]
Length = 325
Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 114/182 (62%), Positives = 141/182 (77%), Gaps = 2/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++P+SV YGLG+ +HD EGRL+T EFD F+L++ YVPNSG GLRRL+YR+ EWDP S +
Sbjct: 146 VQPISVQYGLGVPEHDQEGRLITLEFDDFYLVNAYVPNSGRGLRRLNYRVNEWDPCFSDF 205
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K+LE KPVI+ GDLNCA + IDI+NP +AGFT EER+SF NF S+G +DTFR
Sbjct: 206 IKKLESSKPVIVAGDLNCARESIDIHNPQAKTEAAGFTVEERESFEENFSSEGLIDTFRK 265
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH V YT+WG R TN+GWRLDYFL S+S+ADK HDSY LPDV+ SDHSPIGL+L
Sbjct: 266 QHPNAVAYTFWG--ENQRITNKGWRLDYFLASESIADKVHDSYTLPDVSLSDHSPIGLVL 323
Query: 181 KL 182
KL
Sbjct: 324 KL 325
>gi|222619409|gb|EEE55541.1| hypothetical protein OsJ_03775 [Oryza sativa Japonica Group]
Length = 360
Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 118/182 (64%), Positives = 140/182 (76%), Gaps = 2/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KP+SV YG+GI +HD EGR++T EFD F+L++ YVPNSG LRRL+YR+ WDP S+Y
Sbjct: 142 VKPISVQYGIGIREHDHEGRVITLEFDGFYLVNAYVPNSGRFLRRLNYRVNNWDPCFSNY 201
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK LEK KPVI+ GDLNCA Q IDI+NP +SAGFT EER+SF NF SKG VDTFR
Sbjct: 202 VKILEKSKPVIVAGDLNCARQSIDIHNPPAKTKSAGFTIEERESFETNFSSKGLVDTFRK 261
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH VGYT+WG R TN+GWRLDYFL S+S+ DK HDSYILPDV+ SDHSPIGL+
Sbjct: 262 QHPNAVGYTFWG--ENQRITNKGWRLDYFLASESITDKVHDSYILPDVSFSDHSPIGLVF 319
Query: 181 KL 182
L
Sbjct: 320 VL 321
>gi|326517565|dbj|BAK03701.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 116/182 (63%), Positives = 142/182 (78%), Gaps = 2/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KP+SV YG+GI++HD EGR++T EF++F+L++ YVPNSG GLRRL YR+ WDPS S +
Sbjct: 117 VKPISVQYGIGIAEHDQEGRVITLEFENFYLVNAYVPNSGRGLRRLVYRVDNWDPSFSDF 176
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
V++LE KPVI+ GDLNCA Q IDI+NPA AGFT+EER+SF NF +GFVDTFR
Sbjct: 177 VEKLESFKPVIVAGDLNCARQSIDIHNPAAKTEDAGFTEEERESFQINFDMRGFVDTFRK 236
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH VGYT+WG R N+GWRLDYFL S S+ D+ HDSYILPDVT SDHSPIGL+L
Sbjct: 237 QHPKAVGYTFWG--ENQRCNNKGWRLDYFLASGSIIDRVHDSYILPDVTSSDHSPIGLVL 294
Query: 181 KL 182
KL
Sbjct: 295 KL 296
>gi|384247332|gb|EIE20819.1| hypothetical protein COCSUDRAFT_18358, partial [Coccomyxa
subellipsoidea C-169]
Length = 246
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 142/179 (79%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSVT GLG DHD EGR++TAE+ SF++++ YVPNSG+GL+RL YR+ WD + + Y+
Sbjct: 62 KPLSVTNGLGKEDHDQEGRVITAEYPSFYVVNVYVPNSGEGLKRLEYRVGSWDVAFADYL 121
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L KKPVILTGDLNCAHQEIDI++P N +SAGFT+EER+SF A L +GF DTFR +
Sbjct: 122 AGLGAKKPVILTGDLNCAHQEIDIHDPKRNLKSAGFTEEERKSFSAQLLQRGFKDTFREK 181
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ VVGYTYW YR G R NRGWRLDYFLVS++LA++ HD + LPDV GSDH P+GL+L
Sbjct: 182 YPDVVGYTYWNYRTGARVRNRGWRLDYFLVSEALAERVHDIFHLPDVQGSDHCPVGLVL 240
>gi|357125456|ref|XP_003564410.1| PREDICTED: LOW QUALITY PROTEIN: apurinic endonuclease-redox
protein-like [Brachypodium distachyon]
Length = 298
Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 112/182 (61%), Positives = 141/182 (77%), Gaps = 2/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KP+SV YG+G +++D EGR++T EFD F+L++ YVPNSG GLRRL YR+ +WDP S Y
Sbjct: 119 VKPISVQYGIGKAENDQEGRVITLEFDYFYLVNAYVPNSGRGLRRLIYRVDDWDPCFSDY 178
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+++LE KPVI+ GDLNCA Q IDI+NP AGFT EER+SF NF +G+VDTFR
Sbjct: 179 IEKLELSKPVIVAGDLNCARQSIDIHNPPAKTEDAGFTVEERESFEINFSMRGYVDTFRK 238
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
QH VGYT+WG R+TN+GWRLDYFL S+ ++D+ HDSYILPDVT SDHSPIGL+L
Sbjct: 239 QHPNAVGYTFWG--ENQRRTNKGWRLDYFLASEHISDRVHDSYILPDVTSSDHSPIGLVL 296
Query: 181 KL 182
KL
Sbjct: 297 KL 298
>gi|307108235|gb|EFN56476.1| hypothetical protein CHLNCDRAFT_30910 [Chlorella variabilis]
Length = 371
Score = 238 bits (608), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 105/179 (58%), Positives = 134/179 (74%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PLSV+ G+G +HD EGR++TAEF +F+L++CY PNSG+GL+RL YR+ +WD S+Y+K
Sbjct: 192 PLSVSCGIGAEEHDGEGRVITAEFSAFYLVNCYTPNSGEGLKRLGYRVEKWDKDFSAYLK 251
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
LE+ KPV++TGDLN A EIDI++P N +SAGFT +ER SF AN L +GFVD FR Q+
Sbjct: 252 RLEQHKPVVVTGDLNVAPAEIDIHSPKTNLKSAGFTPQERASFAANLLGQGFVDCFRTQY 311
Query: 123 RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
V YTYWGYR R N+GWRLD+FLVSQ L HD Y LP + GSDH P+GL+LK
Sbjct: 312 PEAVAYTYWGYRFNARGNNKGWRLDHFLVSQQLHSSLHDCYHLPAIMGSDHCPLGLVLK 370
>gi|169347307|ref|ZP_02866245.1| hypothetical protein CLOSPI_00022 [Clostridium spiroforme DSM 1552]
gi|169293924|gb|EDS76057.1| exodeoxyribonuclease III [Clostridium spiroforme DSM 1552]
Length = 252
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 131/183 (71%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLS +YG+ I +HD EGR++T E++ F+L++CY PNS DGL+RL YR W+ +Y
Sbjct: 71 VKPLSYSYGINIEEHDQEGRVITLEYNKFYLVNCYTPNSQDGLKRLEYRQV-WEDDFLAY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K LE+KKPVIL GDLN AHQEID+ NP NR++AGF+DEER L+ GF+DTFR
Sbjct: 130 LKSLEEKKPVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAKM-TQLLNHGFIDTFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + G Y++W YR RK N GWR+DYF+VS L +K D+YI D+ GSDH P+GL
Sbjct: 189 LYPDLQGAYSWWSYRFNARKNNAGWRIDYFIVSDCLKEKIKDAYIFKDIMGSDHCPVGLD 248
Query: 180 LKL 182
++L
Sbjct: 249 IEL 251
>gi|297827811|ref|XP_002881788.1| hypothetical protein ARALYDRAFT_483247 [Arabidopsis lyrata subsp.
lyrata]
gi|297327627|gb|EFH58047.1| hypothetical protein ARALYDRAFT_483247 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 94/117 (80%), Positives = 109/117 (93%)
Query: 19 GRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVILTGDLNC 78
G +VTAEFDSF+L++ YVPNSGDGL+RLSYRI EWD +LS+++KELEK KPV+LTGDLNC
Sbjct: 282 GLIVTAEFDSFYLINTYVPNSGDGLKRLSYRIEEWDRTLSNHIKELEKSKPVVLTGDLNC 341
Query: 79 AHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVGYTYWGYRH 135
AH+EID++NPAGN+RSAGFT EERQSFGANFL+KGFVDTFR QH GVVGYTYWGYRH
Sbjct: 342 AHEEIDVFNPAGNKRSAGFTIEERQSFGANFLAKGFVDTFRKQHLGVVGYTYWGYRH 398
>gi|340382054|ref|XP_003389536.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like
[Amphimedon queenslandica]
Length = 372
Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 128/182 (70%), Gaps = 1/182 (0%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P++VTYG+GI HD+EGR++TAEF+ F+ ++ Y+PN+GD L+RLSYR+ EWDP Y+
Sbjct: 191 EPINVTYGIGIPKHDNEGRVITAEFEKFYFVTAYIPNAGDKLKRLSYRVGEWDPDFKKYL 250
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++ KPV+L GDLN AH+EIDI NP N+RSAGFT EER+SF + +D+FR
Sbjct: 251 KSLDENKPVVLCGDLNVAHKEIDIANPKTNQRSAGFTKEERESFSSLLEDNKLIDSFRDL 310
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y+YW YR RK N+GWRLDYFLVS+ L DS I V GSDH PI L++
Sbjct: 311 YPDKKEAYSYWSYRSNARKNNKGWRLDYFLVSERLKAAVCDSIIRSQVYGSDHCPIVLLV 370
Query: 181 KL 182
L
Sbjct: 371 AL 372
>gi|288803025|ref|ZP_06408461.1| exodeoxyribonuclease III [Prevotella melaninogenica D18]
gi|288334542|gb|EFC72981.1| exodeoxyribonuclease III [Prevotella melaninogenica D18]
Length = 249
Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 130/180 (72%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSVTYG+ I +HD EGR++T E D F+L++ Y PNS DGLRRL YR+ +W+ +Y+
Sbjct: 72 KPLSVTYGINIDEHDHEGRVITLEMDDFYLVTVYTPNSQDGLRRLDYRM-KWEDDFQAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L++KKPVI+ GD+N AHQEID+ NP NR++AGFTDEER+ LS GF+DTFR
Sbjct: 131 HKLDEKKPVIVCGDMNVAHQEIDLKNPKTNRKNAGFTDEEREKM-TQLLSNGFIDTFRTL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R+ N GWR+DYFL+S+ L D+ D+ I ++ GSDH P+ +ILK
Sbjct: 190 YPEQVTYSWWSYRFRAREKNTGWRIDYFLISERLKDRLEDAKIHTEIMGSDHCPVEIILK 249
>gi|291561139|emb|CBL39938.1| exodeoxyribonuclease III [butyrate-producing bacterium SS3/4]
Length = 284
Score = 208 bits (529), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 130/181 (71%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P++VTYGLGI +HD EGR++TAEF +++++CY PNS DGL+RL YR+ +W+ + +Y+
Sbjct: 106 EPIAVTYGLGIEEHDHEGRVITAEFPEYYVVTCYTPNSQDGLKRLDYRM-QWEDAFRAYL 164
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
KELE KKPVI GDLN AHQEID+ NP NR++AGF+DEER F L GFVDTFR
Sbjct: 165 KELETKKPVIFCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAKF-TELLEAGFVDTFRYF 223
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R N GWR+DYF VS+SL D+ D+ I +V GSDH P+ L +
Sbjct: 224 YPDQEGIYSWWSYRFSARAKNAGWRIDYFCVSESLKDRLVDAKIHTEVMGSDHCPVELDI 283
Query: 181 K 181
+
Sbjct: 284 Q 284
>gi|302345223|ref|YP_003813576.1| exodeoxyribonuclease III [Prevotella melaninogenica ATCC 25845]
gi|302150206|gb|ADK96468.1| exodeoxyribonuclease III [Prevotella melaninogenica ATCC 25845]
Length = 249
Score = 208 bits (529), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 129/180 (71%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSVTYG+ I +HD EGR++T E + F+L++ Y PNS DGLRRL YR+ +W+ +Y+
Sbjct: 72 KPLSVTYGIDIDEHDHEGRVITLEMEDFYLVTVYTPNSQDGLRRLEYRM-KWEDDFQAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L++KKPVI+ GD+N AHQEID+ NP N ++AGFTDEER+ LS GF+DTFR
Sbjct: 131 HKLDEKKPVIVCGDMNVAHQEIDLKNPKTNHKNAGFTDEEREKM-TQLLSNGFIDTFRTL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R+ N GWR+DYFL+S+ L D+ D+ I ++ GSDH P+ +ILK
Sbjct: 190 YPEQVTYSWWSYRFRAREKNTGWRIDYFLISERLKDRLEDAKIHTEIMGSDHCPVEIILK 249
>gi|384177745|ref|YP_005559130.1| exodeoxyribonuclease III [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349596969|gb|AEP93156.1| exodeoxyribonuclease III [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 252
Score = 208 bits (529), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 133/182 (73%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL V YG+G+ +HD EGR++T EF++ ++++ Y PNS GL R+ YR+ +W+ +L SY+
Sbjct: 73 EPLHVIYGIGVEEHDQEGRVITLEFENVYVMTVYTPNSRRGLERIDYRM-QWEEALLSYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
ELEKKKPVIL GDLN AHQEID+ NP NR +AGF+D+ER++F FL GFVD+FR
Sbjct: 132 LELEKKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSDQEREAF-TRFLEAGFVDSFRHV 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR G R N GWR+DYF+VS+SL ++ D+ I DV GSDH P+ LI+
Sbjct: 191 YPDLEGAYSWWSYRAGARDRNIGWRIDYFVVSESLKEQIEDASISADVMGSDHCPVELII 250
Query: 181 KL 182
+
Sbjct: 251 NI 252
>gi|16081140|ref|NP_391968.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312070|ref|ZP_03593917.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp.
subtilis str. 168]
gi|221316395|ref|ZP_03598200.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221321308|ref|ZP_03602602.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221325591|ref|ZP_03606885.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp.
subtilis str. SMY]
gi|402778258|ref|YP_006632202.1| Apurinic/apyrimidinic endonuclease [Bacillus subtilis QB928]
gi|452912770|ref|ZP_21961398.1| exodeoxyribonuclease III [Bacillus subtilis MB73/2]
gi|585113|sp|P37454.1|EXOA_BACSU RecName: Full=Exodeoxyribonuclease
gi|467372|dbj|BAA05218.1| 3'-exo-deoxyribonuclease [Bacillus subtilis]
gi|2636635|emb|CAB16125.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp.
subtilis str. 168]
gi|402483437|gb|AFQ59946.1| Apurinic/apyrimidinic endonuclease [Bacillus subtilis QB928]
gi|407962942|dbj|BAM56182.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis BEST7613]
gi|407966954|dbj|BAM60193.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis BEST7003]
gi|452117798|gb|EME08192.1| exodeoxyribonuclease III [Bacillus subtilis MB73/2]
Length = 252
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 133/182 (73%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL V YG+G+ +HD EGR++T EF++ F+++ Y PNS GL R+ YR+ +W+ +L SY+
Sbjct: 73 EPLQVIYGIGVEEHDQEGRVITLEFENVFVMTVYTPNSRRGLERIDYRM-QWEEALLSYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL++KKPVIL GDLN AHQEID+ NP NR +AGF+D+ER++F FL GFVD+FR
Sbjct: 132 LELDQKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSDQEREAF-TRFLEAGFVDSFRHV 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR G R N GWR+DYF+VS+SL ++ D+ I DV GSDH P+ LI+
Sbjct: 191 YPDLEGAYSWWSYRAGARDRNIGWRIDYFVVSESLKEQIEDASISADVMGSDHCPVELII 250
Query: 181 KL 182
+
Sbjct: 251 NI 252
>gi|321313648|ref|YP_004205935.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis BSn5]
gi|430756766|ref|YP_007207426.1| exodeoxyribonuclease [Bacillus subtilis subsp. subtilis str. BSP1]
gi|320019922|gb|ADV94908.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis BSn5]
gi|430021286|gb|AGA21892.1| Exodeoxyribonuclease [Bacillus subtilis subsp. subtilis str. BSP1]
Length = 252
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 133/182 (73%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL V YG+G+ +HD EGR++T EF++ F+++ Y PNS GL R+ YR+ +W+ +L SY+
Sbjct: 73 EPLQVIYGIGVEEHDQEGRVITLEFENVFVMTVYTPNSRRGLERIDYRM-QWEEALLSYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL++KKPVIL GDLN AHQEID+ NP NR +AGF+D+ER++F FL GFVD+FR
Sbjct: 132 LELDQKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSDQEREAF-TRFLEAGFVDSFRHV 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR G R N GWR+DYF+VS+SL ++ D+ I DV GSDH P+ LI+
Sbjct: 191 YPDLEGAYSWWSYRAGARDRNIGWRIDYFVVSESLKEQIEDASISADVMGSDHCPVELII 250
Query: 181 KL 182
+
Sbjct: 251 NI 252
>gi|295099755|emb|CBK88844.1| exodeoxyribonuclease III [Eubacterium cylindroides T2-87]
Length = 249
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/182 (53%), Positives = 134/182 (73%), Gaps = 4/182 (2%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I+PLSV YG+ I +HD+EGR++T EFDS+++++ Y PNSGDGL+RL YR+ EWD + S+Y
Sbjct: 72 IEPLSVHYGIDIPEHDTEGRVITLEFDSYYVVTVYTPNSGDGLKRLEYRM-EWDKAFSNY 130
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++ L+ KPV+LTGDLN A++EIDI NP NRR+AGFTDEER SF N L+ D++R
Sbjct: 131 IQSLD--KPVLLTGDLNVANEEIDIKNPKTNRRNAGFTDEERDSFKKNLLTI-LKDSYRT 187
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ V Y++W YR R+ N GWR+DY+LVS+ L K DS IL D+ GSDH P+ L +
Sbjct: 188 LYPDKVEYSWWSYRFKAREKNAGWRIDYWLVSEELMPKVKDSKILTDIYGSDHCPVQLEI 247
Query: 181 KL 182
+L
Sbjct: 248 EL 249
>gi|327313318|ref|YP_004328755.1| exodeoxyribonuclease III [Prevotella denticola F0289]
gi|326944960|gb|AEA20845.1| exodeoxyribonuclease III [Prevotella denticola F0289]
Length = 249
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 129/180 (71%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VTYG+GI +HD EGR++T E D F+L++ Y PNS DGLRRL YR+ +W+ +Y+
Sbjct: 72 KPLNVTYGIGIDEHDHEGRVITLEMDDFYLVTVYTPNSQDGLRRLDYRM-KWEDDFQAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L++KKPV++ GD+N AHQEID+ NP NR++AGFTDEER+ L GF+DTFR
Sbjct: 131 HKLDEKKPVVVCGDMNVAHQEIDLKNPKTNRKNAGFTDEEREKM-TQLLGNGFIDTFRTL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R+ N GWR+DYFL+S+ L D+ D+ I ++ GSDH P+ + LK
Sbjct: 190 YPEQVTYSWWSYRFRARERNTGWRIDYFLISERLRDRLEDAKIHTEIMGSDHCPVEVDLK 249
>gi|294674336|ref|YP_003574952.1| exodeoxyribonuclease III [Prevotella ruminicola 23]
gi|294473057|gb|ADE82446.1| exodeoxyribonuclease III [Prevotella ruminicola 23]
Length = 249
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 128/179 (71%), Gaps = 2/179 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PLSVTYG+GI +HD EGR++T E + F+L++CY PNS DGL+RL YR+T W+ +Y+K
Sbjct: 73 PLSVTYGIGIDEHDHEGRVITLEMEDFYLVTCYTPNSQDGLKRLDYRMT-WENDFRAYLK 131
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L+ KKPVIL GDLN AHQEID+ NP NR +AGFTD+ER+ F + L+ GF D+FR ++
Sbjct: 132 GLDAKKPVILCGDLNVAHQEIDLKNPKTNRMNAGFTDQEREQF-STLLASGFTDSFRYKY 190
Query: 123 RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
V Y++W YR R+ N GWR+DYF++S L ++ D+ I + GSDH P+ L LK
Sbjct: 191 PEQVTYSWWSYRFQARQKNAGWRIDYFVISDRLRERMDDARIHTQILGSDHCPVELTLK 249
>gi|260592674|ref|ZP_05858132.1| exodeoxyribonuclease III [Prevotella veroralis F0319]
gi|260535444|gb|EEX18061.1| exodeoxyribonuclease III [Prevotella veroralis F0319]
Length = 249
Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 127/180 (70%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSVTYG+ I +HD EGR++T E D F+L++ Y PNS D LRRL YR+ +W+ SY+
Sbjct: 72 KPLSVTYGIDIDEHDHEGRVITLEMDDFYLVTVYTPNSQDELRRLEYRM-KWEDDFQSYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L++ KPVI+ GD+N AHQEID+ NP NRR+AGFTDEERQ LS GF+DTFR
Sbjct: 131 HKLDEIKPVIVCGDMNVAHQEIDLKNPKTNRRNAGFTDEERQKM-TQLLSNGFIDTFRTL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R+ N GWR+DYFL+S+ L D+ D+ I ++ GSDH PI + LK
Sbjct: 190 YPEQVTYSWWSYRFRAREKNTGWRIDYFLISERLRDRLVDAKIHTEIMGSDHCPIEIDLK 249
>gi|429726547|ref|ZP_19261335.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 473 str. F0040]
gi|429146016|gb|EKX89089.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 473 str. F0040]
Length = 267
Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 129/182 (70%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPLSV YGLGI +HD EGR++T EF+ +LL+ Y PNS DGLRRL YR+T WD +Y
Sbjct: 88 IKPLSVRYGLGIEEHDHEGRVITLEFEDLYLLTVYTPNSQDGLRRLDYRMT-WDDDFRAY 146
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
V++L+ KPV++ GDLN AHQEID+ NP NR++AGFTDEERQ F + L GF DT+R
Sbjct: 147 VQQLDAHKPVVICGDLNVAHQEIDLKNPKTNRKNAGFTDEERQKF-SQLLEAGFTDTYRF 205
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + Y++W YR R+ N GWR+DYF+ SQSL D+ + I ++ GSDH P+ L+
Sbjct: 206 FNPDLTDSYSWWSYRFKAREKNAGWRIDYFVTSQSLNDRLVSADIHQEIFGSDHCPVELV 265
Query: 180 LK 181
+K
Sbjct: 266 IK 267
>gi|357041996|ref|ZP_09103703.1| exodeoxyribonuclease [Prevotella histicola F0411]
gi|355370010|gb|EHG17399.1| exodeoxyribonuclease [Prevotella histicola F0411]
Length = 249
Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 128/180 (71%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSV+YG+ I +HD EGR++T E D FFL++ Y PNS DGLRRL YR+ +W+ +Y+
Sbjct: 72 KPLSVSYGIDIEEHDHEGRVITLEMDDFFLVTVYTPNSQDGLRRLEYRM-KWEDDFQAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+ KKPVI+ GD+N AH+EIDI NP NRR+AGFTDEER+ L+ GF+DTFR+
Sbjct: 131 HKLDAKKPVIVCGDMNVAHEEIDIKNPKTNRRNAGFTDEEREKM-TQLLNNGFIDTFRSL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R+ N GWR+DYFL+S L D+ D+ I ++ GSDH P+ + LK
Sbjct: 190 YPEQVTYSWWSYRFRARERNTGWRIDYFLISDRLKDRLVDAKIHTEIMGSDHCPVEVDLK 249
>gi|325854960|ref|ZP_08171676.1| exodeoxyribonuclease III [Prevotella denticola CRIS 18C-A]
gi|325483938|gb|EGC86878.1| exodeoxyribonuclease III [Prevotella denticola CRIS 18C-A]
Length = 249
Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 126/180 (70%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL VTYG+G+ +HD EGR++T E D F+L++ Y PNS DGLRRL YR+ +W+ Y+
Sbjct: 72 KPLDVTYGIGMDEHDHEGRVITLEMDDFYLVTVYTPNSQDGLRRLDYRM-KWEKDFQDYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L++KKPV++ GD+N AH+EIDI NP NRR+AGFTDEER+ L GF+DTFR
Sbjct: 131 HRLDRKKPVVVCGDMNVAHEEIDIKNPKTNRRNAGFTDEEREKM-TQLLDSGFIDTFRTL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R+ N GWR+DYFL+S+ L D+ D+ I ++ GSDH P+ + LK
Sbjct: 190 YPEQVTYSWWSYRFRARERNTGWRIDYFLISERLRDRLEDAKIHTEIMGSDHCPVEVDLK 249
>gi|212694611|ref|ZP_03302739.1| hypothetical protein BACDOR_04139 [Bacteroides dorei DSM 17855]
gi|237711123|ref|ZP_04541604.1| exodeoxyribonuclease [Bacteroides sp. 9_1_42FAA]
gi|265750710|ref|ZP_06086773.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_33FAA]
gi|345515228|ref|ZP_08794734.1| exodeoxyribonuclease [Bacteroides dorei 5_1_36/D4]
gi|423228072|ref|ZP_17214478.1| exodeoxyribonuclease III (xth) [Bacteroides dorei CL02T00C15]
gi|423239233|ref|ZP_17220349.1| exodeoxyribonuclease III (xth) [Bacteroides dorei CL03T12C01]
gi|423243335|ref|ZP_17224411.1| exodeoxyribonuclease III (xth) [Bacteroides dorei CL02T12C06]
gi|212663112|gb|EEB23686.1| exodeoxyribonuclease III [Bacteroides dorei DSM 17855]
gi|229434345|gb|EEO44422.1| exodeoxyribonuclease [Bacteroides dorei 5_1_36/D4]
gi|229454967|gb|EEO60688.1| exodeoxyribonuclease [Bacteroides sp. 9_1_42FAA]
gi|263237606|gb|EEZ23056.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_33FAA]
gi|392637108|gb|EIY30983.1| exodeoxyribonuclease III (xth) [Bacteroides dorei CL02T00C15]
gi|392645342|gb|EIY39070.1| exodeoxyribonuclease III (xth) [Bacteroides dorei CL02T12C06]
gi|392647020|gb|EIY40726.1| exodeoxyribonuclease III (xth) [Bacteroides dorei CL03T12C01]
Length = 252
Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 130/185 (70%), Gaps = 7/185 (3%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLSVTYGLGI +HD EGR++T E +S++L++ Y PNS + LRRL YR+ +WD +Y
Sbjct: 72 VKPLSVTYGLGIEEHDHEGRVITLELESYYLITVYTPNSQEELRRLDYRM-KWDDDFRAY 130
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFR- 119
+K+LE+KKPVI+ GDLN AH+EID+ NP NR++AGFTDEER F L GF DTFR
Sbjct: 131 LKKLEEKKPVIVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERAKF-TTLLESGFTDTFRY 189
Query: 120 --AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIG 177
+ G+ Y++W YR R+ N GWR+DYFL S SL DK + I D+ GSDH P+
Sbjct: 190 FYPEQEGI--YSWWSYRFKAREKNAGWRIDYFLTSDSLKDKLRGAQIHTDILGSDHCPVE 247
Query: 178 LILKL 182
L ++L
Sbjct: 248 LTIEL 252
>gi|449096551|ref|YP_007429042.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis XF-1]
gi|449030466|gb|AGE65705.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis XF-1]
Length = 252
Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 132/182 (72%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL V YG+G+ +HD EGR++T EF++ F+++ Y PNS GL R+ YR+ +W+ +L SY+
Sbjct: 73 EPLQVIYGIGVEEHDQEGRVITLEFENVFVMTVYTPNSRRGLERIDYRM-QWEEALLSYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL++KKPVIL GDLN AHQEID+ NP NR +AGF+D+ER +F FL GFVD+FR
Sbjct: 132 LELDQKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSDQERGAF-TRFLEAGFVDSFRHV 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR G R N GWR+DYF+VS+SL ++ D+ I DV GSDH P+ LI+
Sbjct: 191 YPDLEGAYSWWSYRAGARDRNIGWRIDYFVVSESLKEQIEDASISADVMGSDHCPVELII 250
Query: 181 KL 182
+
Sbjct: 251 NI 252
>gi|325269387|ref|ZP_08136004.1| exodeoxyribonuclease III [Prevotella multiformis DSM 16608]
gi|324988308|gb|EGC20274.1| exodeoxyribonuclease III [Prevotella multiformis DSM 16608]
Length = 249
Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 128/180 (71%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL VTYG+G+ +HD EGR++T E D F+L++ Y PNS DGLRRL YR+ +W+ +Y+
Sbjct: 72 KPLDVTYGIGMDEHDHEGRVITLEMDDFYLVTVYTPNSQDGLRRLDYRM-KWEKDFQNYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L++KKPV++ GD+N AH+EIDI NP NRR+AGFTDEER+ L GF+DTFR+
Sbjct: 131 HWLDEKKPVVVCGDMNVAHEEIDIKNPKTNRRNAGFTDEEREKM-TQLLDSGFIDTFRSL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R+ N GWR+DYFL+S+ L D+ D+ I ++ GSDH PI + LK
Sbjct: 190 YPEQVTYSWWSYRFRARERNTGWRIDYFLISERLRDRLEDAKIHTEIMGSDHCPIEVDLK 249
>gi|350268379|ref|YP_004879686.1| exodeoxyribonuclease III [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349601266|gb|AEP89054.1| exodeoxyribonuclease III [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 252
Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 131/182 (71%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL V YG+GI +HD EGR++T EF++ F+++ Y PNS GL R+ YR+ +W+ +L SY+
Sbjct: 73 KPLHVMYGIGIEEHDQEGRVITLEFENLFVMTVYTPNSKRGLERIDYRM-QWEEALLSYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL+KKKPVIL GDLN AHQEID+ NP NR +AGF+++ER +F FL GFVD+FR
Sbjct: 132 LELDKKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSEQERGAF-TRFLEAGFVDSFRHV 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR G R N GWRLDYF+VS+ L ++ D+ I DV GSDH P+ L++
Sbjct: 191 YPDLEGAYSWWSYRAGARDRNIGWRLDYFVVSERLKEQIEDASISADVMGSDHCPVELMI 250
Query: 181 KL 182
+
Sbjct: 251 NI 252
>gi|423311909|ref|ZP_17289846.1| exodeoxyribonuclease III (xth) [Bacteroides vulgatus CL09T03C04]
gi|392689288|gb|EIY82566.1| exodeoxyribonuclease III (xth) [Bacteroides vulgatus CL09T03C04]
Length = 252
Score = 204 bits (520), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 97/185 (52%), Positives = 131/185 (70%), Gaps = 7/185 (3%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLSVTYGLGI +HD EGR++T E +SF+L++ Y PNS + LRRL YR+ +W+ +Y
Sbjct: 72 VKPLSVTYGLGIEEHDHEGRVITLELESFYLITVYTPNSQEELRRLDYRM-KWEDDFRAY 130
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFR- 119
+K+LE+KKPVI+ GDLN AH+EID+ NP NR++AGFTDEER F L GF DTFR
Sbjct: 131 LKKLEEKKPVIVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERTKF-TTLLESGFTDTFRY 189
Query: 120 --AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIG 177
+ G+ Y++W YR R+ N GWR+DYFL S SL D+ ++I D+ GSDH P+
Sbjct: 190 FYPEQEGI--YSWWSYRFKAREKNSGWRIDYFLTSDSLKDRLKGAHIYTDIFGSDHCPVE 247
Query: 178 LILKL 182
L ++L
Sbjct: 248 LTIEL 252
>gi|340352974|ref|ZP_08675807.1| exodeoxyribonuclease III [Prevotella pallens ATCC 700821]
gi|339611994|gb|EGQ16810.1| exodeoxyribonuclease III [Prevotella pallens ATCC 700821]
Length = 250
Score = 204 bits (520), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 130/181 (71%), Gaps = 2/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP++V YGL I +HD EGR++T E ++FFL++CY PNS DGL+RL YR+ +W+ +Y+
Sbjct: 72 KPINVHYGLDIDEHDHEGRVITLEMETFFLVTCYTPNSQDGLKRLDYRM-KWEDDFQAYI 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+L+KKKPV++ GDLN AH+EID+ NP NR++AGFTDEER FL+ GF+D+FR
Sbjct: 131 KQLDKKKPVVICGDLNVAHEEIDLKNPKTNRKNAGFTDEERAKM-TQFLNNGFIDSFRTL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ + Y++W YR R+ N GWR+DYFL+S L ++ D+ I +V GSDH P+ + L
Sbjct: 190 YPEQITYSWWSYRFKAREKNAGWRIDYFLLSNRLRNQLIDAKIHTEVYGSDHCPVEVELN 249
Query: 182 L 182
L
Sbjct: 250 L 250
>gi|182413315|ref|YP_001818381.1| exodeoxyribonuclease III Xth [Opitutus terrae PB90-1]
gi|177840529|gb|ACB74781.1| exodeoxyribonuclease III Xth [Opitutus terrae PB90-1]
Length = 253
Score = 204 bits (520), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 125/182 (68%), Gaps = 2/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+ PL V +G+G+ HD EGR++TAEF FFL++ Y PNS GL RL YR EWDP+ ++
Sbjct: 73 VAPLKVNFGIGLPGHDDEGRVITAEFADFFLVNVYQPNSQRGLTRLKYRTEEWDPAFLAF 132
Query: 61 VKELEKK-KPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFR 119
+K+LEKK KPV+ GDLN AHQEID+ NP NRR+AGFTDEER +F + L+ GFVDTFR
Sbjct: 133 LKKLEKKGKPVVFCGDLNVAHQEIDLTNPKTNRRNAGFTDEERANF-SKLLASGFVDTFR 191
Query: 120 AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+G YT+W R N GWR+DYF+ S+ L ++I P+V GSDH P+GL
Sbjct: 192 EFEKGPGHYTWWSQMMNCRARNIGWRVDYFVASEKLKPALKRAWISPEVMGSDHCPVGLE 251
Query: 180 LK 181
LK
Sbjct: 252 LK 253
>gi|150005146|ref|YP_001299890.1| exodeoxyribonuclease [Bacteroides vulgatus ATCC 8482]
gi|294778957|ref|ZP_06744373.1| exodeoxyribonuclease III [Bacteroides vulgatus PC510]
gi|319642656|ref|ZP_07997302.1| exodeoxyribonuclease [Bacteroides sp. 3_1_40A]
gi|345520248|ref|ZP_08799647.1| exodeoxyribonuclease [Bacteroides sp. 4_3_47FAA]
gi|149933570|gb|ABR40268.1| exodeoxyribonuclease [Bacteroides vulgatus ATCC 8482]
gi|254836074|gb|EET16383.1| exodeoxyribonuclease [Bacteroides sp. 4_3_47FAA]
gi|294447266|gb|EFG15850.1| exodeoxyribonuclease III [Bacteroides vulgatus PC510]
gi|317385744|gb|EFV66677.1| exodeoxyribonuclease [Bacteroides sp. 3_1_40A]
Length = 252
Score = 204 bits (520), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 97/185 (52%), Positives = 131/185 (70%), Gaps = 7/185 (3%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLSVTYGLGI +HD EGR++T E +SF+L++ Y PNS + LRRL YR+ +W+ +Y
Sbjct: 72 VKPLSVTYGLGIEEHDHEGRVITLELESFYLITVYTPNSQEELRRLDYRM-KWEDDFRAY 130
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFR- 119
+K+LE+KKPVI+ GDLN AH+EID+ NP NR++AGFTDEER F L GF DTFR
Sbjct: 131 LKKLEEKKPVIVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERAKF-TTLLESGFTDTFRY 189
Query: 120 --AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIG 177
+ G+ Y++W YR R+ N GWR+DYFL S SL D+ ++I D+ GSDH P+
Sbjct: 190 FYPEQEGI--YSWWSYRFKAREKNSGWRIDYFLTSDSLKDRLKGAHIYTDIFGSDHCPVE 247
Query: 178 LILKL 182
L ++L
Sbjct: 248 LTIEL 252
>gi|340349685|ref|ZP_08672691.1| exodeoxyribonuclease III [Prevotella nigrescens ATCC 33563]
gi|387133768|ref|YP_006299740.1| exodeoxyribonuclease III [Prevotella intermedia 17]
gi|445112647|ref|ZP_21377202.1| exodeoxyribonuclease III (xth) [Prevotella nigrescens F0103]
gi|339610439|gb|EGQ15291.1| exodeoxyribonuclease III [Prevotella nigrescens ATCC 33563]
gi|386376616|gb|AFJ08042.1| exodeoxyribonuclease III [Prevotella intermedia 17]
gi|444841476|gb|ELX68491.1| exodeoxyribonuclease III (xth) [Prevotella nigrescens F0103]
Length = 250
Score = 204 bits (520), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 129/181 (71%), Gaps = 2/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSV+YGLGI +HD EGR++T E + F+L++CY PN+ DGL+RL YR+ +W+ +YV
Sbjct: 72 KPLSVSYGLGIDEHDHEGRVITLEMEKFYLVTCYTPNAQDGLKRLDYRM-QWEDDFQAYV 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI+ GDLN AH+EID+ NP NR++AGF+DEER FL GF+D+FR
Sbjct: 131 KRLDEKKPVIVCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKM-TQFLGNGFIDSFRTL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R+ N GWR+DYFL+S L ++ D+ I +V GSDH P+ + L
Sbjct: 190 YPEQVTYSWWSYRFKAREKNAGWRIDYFLLSNRLREQLVDAKIHTEVYGSDHCPVEVELN 249
Query: 182 L 182
L
Sbjct: 250 L 250
>gi|428281769|ref|YP_005563504.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp. natto
BEST195]
gi|291486726|dbj|BAI87801.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp. natto
BEST195]
Length = 252
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 132/182 (72%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL V YG+G+ +HD EGR++T EF++ F+++ Y PNS GL R+ YR+ +W+ +L SY+
Sbjct: 73 EPLQVIYGIGLEEHDQEGRVITLEFENVFVITVYTPNSRRGLERIDYRM-QWEEALLSYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL++KKPVIL GDLN AHQEID+ NP NR +AGF+D+ER++F FL GFVD+FR
Sbjct: 132 LELDQKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSDQEREAF-TRFLEAGFVDSFRHV 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR G R N GWR+DYF+VS+ L ++ D+ I DV GSDH P+ LI+
Sbjct: 191 YPDLEGAYSWWSYRAGARDRNIGWRIDYFVVSERLKEQIEDASISADVMGSDHCPVELII 250
Query: 181 KL 182
+
Sbjct: 251 NI 252
>gi|373501432|ref|ZP_09591789.1| exodeoxyribonuclease [Prevotella micans F0438]
gi|371949088|gb|EHO66962.1| exodeoxyribonuclease [Prevotella micans F0438]
Length = 250
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 126/181 (69%), Gaps = 2/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSVTYG+ I +HD EGR++T E + FFL++ Y PNS DGLRRL YR+ +W+ +Y+
Sbjct: 72 KPLSVTYGMNIDEHDHEGRIITLEMEQFFLVTVYTPNSQDGLRRLDYRM-QWESDFLAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L+ +KPVI+ GD+N AH+EID+ NP NRR+AGFTDEERQ L+ GFVDTFR
Sbjct: 131 TSLDCRKPVIVCGDMNVAHEEIDLKNPQNNRRNAGFTDEERQKM-TTLLASGFVDTFRTL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
H Y++W YR R+ N GWR+DYFL+S+ L + ++ I ++ GSDH P+ L+L
Sbjct: 190 HPEEQKYSWWSYRFKAREKNVGWRIDYFLISERLVPQLVEATIHAEIMGSDHCPVELVLN 249
Query: 182 L 182
+
Sbjct: 250 I 250
>gi|299141239|ref|ZP_07034376.1| exodeoxyribonuclease III [Prevotella oris C735]
gi|298577199|gb|EFI49068.1| exodeoxyribonuclease III [Prevotella oris C735]
Length = 250
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 129/181 (71%), Gaps = 2/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P++VTYG+GI +HD EGR++T E+D+FFL++ Y PN+ DGLRRL YR+T W+ +Y+
Sbjct: 72 EPIAVTYGIGIDEHDHEGRVITLEYDNFFLVTVYTPNAQDGLRRLDYRMT-WEDDFQAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L+++KPVI+ GDLN AHQEID+ NP NRR+AGFTDEER+ LS GF DTFR
Sbjct: 131 HRLDEQKPVIVCGDLNVAHQEIDLKNPKSNRRNAGFTDEEREKM-TQLLSHGFTDTFRTL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R+ N GWR+DYFL+S L + D+ I ++ GSDH PI + L+
Sbjct: 190 YPEQVTYSWWSYRFRAREKNAGWRIDYFLISDRLRPQLKDASIHTEIFGSDHCPIEVDLE 249
Query: 182 L 182
L
Sbjct: 250 L 250
>gi|210617713|ref|ZP_03291707.1| hypothetical protein CLONEX_03931 [Clostridium nexile DSM 1787]
gi|210149155|gb|EEA80164.1| hypothetical protein CLONEX_03931 [Clostridium nexile DSM 1787]
Length = 250
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/181 (54%), Positives = 126/181 (69%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YG+GI +HD EGR++T EF+ F+ ++ Y PNS L RLSYRI +W+ +Y+
Sbjct: 72 EPLSVQYGIGIEEHDKEGRVITLEFEEFYFVTVYTPNSQSELARLSYRI-QWETDFLAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE+KKPVI GDLN A+ EID+ NP NR++AGFTDEER FG L GF+DTFR
Sbjct: 131 KGLEQKKPVIFAGDLNVAYAEIDLKNPKTNRKNAGFTDEERAKFG-EVLKAGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR R N GWR+DYF VS+SL D+ D+ IL DV GSDH PI L L
Sbjct: 190 YPEMEGIYSWWSYRFSARAKNAGWRIDYFCVSESLKDRLADAKILTDVMGSDHCPIELDL 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|449664158|ref|XP_002161039.2| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like [Hydra
magnipapillata]
Length = 352
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/183 (54%), Positives = 125/183 (68%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPL VTYGLGI +HDSEGRL+TAEF+ +++++ YVPNSG L RL YR W+ +Y
Sbjct: 172 LKPLKVTYGLGIKEHDSEGRLITAEFEKYYIITTYVPNSGQKLIRLDYRRI-WNTDYKNY 230
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
V EL+KKKPVI+ GD N AH EIDI NP N+R+AGFT+EER F A L G++DTFR
Sbjct: 231 VGELKKKKPVIMCGDFNVAHTEIDIANPNSNKRNAGFTEEERSDFTA-LLEDGYIDTFRK 289
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G YT+W Y R N+GWRLDYF+V++ + D DS I V GSDH PI L
Sbjct: 290 LNPEKTGAYTFWTYMMNARSKNKGWRLDYFIVTKDIEDDICDSVIRSSVMGSDHCPIVLN 349
Query: 180 LKL 182
L +
Sbjct: 350 LAI 352
>gi|410725723|ref|ZP_11364086.1| exodeoxyribonuclease III [Clostridium sp. Maddingley MBC34-26]
gi|410601734|gb|EKQ56234.1| exodeoxyribonuclease III [Clostridium sp. Maddingley MBC34-26]
Length = 252
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 127/182 (69%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV G+GI +HD+EGR++T EF+ F+L++ Y PNS GL RL YR+ W+ Y+
Sbjct: 73 EPLSVKIGIGIEEHDNEGRVLTLEFNDFYLVNVYTPNSKQGLERLDYRMV-WEDVFRQYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
KELEKKKPVIL GDLN AH+EID+ NP NR++AGFTDEER+ L GF+DT+R
Sbjct: 132 KELEKKKPVILCGDLNVAHKEIDLKNPKVNRKNAGFTDEEREKI-TQLLDSGFIDTYRFF 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R N GWR+DYFLVS+SL DK D+ I D+ GSDH P+ L++
Sbjct: 191 YPDKEGAYSWWSYRFNARANNAGWRIDYFLVSESLKDKLEDAKIHMDIEGSDHCPVELLI 250
Query: 181 KL 182
L
Sbjct: 251 NL 252
>gi|197303592|ref|ZP_03168630.1| hypothetical protein RUMLAC_02320 [Ruminococcus lactaris ATCC
29176]
gi|197297326|gb|EDY31888.1| exodeoxyribonuclease III [Ruminococcus lactaris ATCC 29176]
Length = 250
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/181 (54%), Positives = 127/181 (70%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLGI +HD EGR++T EF+ F+ ++ Y PNS L RL YR+ +W+ +Y+
Sbjct: 72 EPLSVSYGLGIEEHDQEGRVITCEFEDFYFVTVYTPNSQSELARLDYRM-KWEDDFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LEKKKPVI+TGDLN AH+EID+ NP NR++AGFTDEER F L GF+DTFR
Sbjct: 131 KKLEKKKPVIVTGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKF-TELLDAGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R N GWR+DYF VS+ L D+ D+ IL +V GSDH PI L L
Sbjct: 190 YPDQEGIYSWWSYRFSARAKNAGWRIDYFCVSECLKDRLADAKILTEVMGSDHCPIELDL 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|383810829|ref|ZP_09966315.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 306 str. F0472]
gi|383356543|gb|EID34041.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 306 str. F0472]
Length = 249
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 126/180 (70%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSVTYG+ I +HD EGR++T E D F+L++ Y PNS D LRRL YR+ +W+ SY+
Sbjct: 72 KPLSVTYGINIDEHDHEGRVITLEMDDFYLVTVYTPNSQDELRRLEYRM-KWEEDFQSYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L++ KPVI+ GD+N AHQEID+ NP NRR+AGFTDEER+ L+ GF+DTFR
Sbjct: 131 HKLDETKPVIVCGDMNVAHQEIDLKNPKTNRRNAGFTDEEREKM-TELLNNGFIDTFRTL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R+ N GWR+DYFL+S+ L D+ D+ I + GSDH PI + LK
Sbjct: 190 YPEQVTYSWWSYRFRAREKNTGWRIDYFLISERLRDRLIDAKIHTETMGSDHCPIEIDLK 249
>gi|386760800|ref|YP_006234017.1| ExoA protein [Bacillus sp. JS]
gi|384934083|gb|AFI30761.1| ExoA [Bacillus sp. JS]
Length = 252
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 133/182 (73%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL V YG+GI +HD EGR++T EF++ F+++ Y PNS GL R+ YR+ +W+ +L SY+
Sbjct: 73 EPLRVMYGIGIEEHDQEGRVITLEFENVFVMTIYTPNSRRGLERIDYRM-QWEEALLSYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL+KKKPVIL GDLN AHQEID+ NP NR++AGF+D+ER +F + L G+VD+FR
Sbjct: 132 LELDKKKPVILCGDLNVAHQEIDLKNPKANRKNAGFSDQERGAF-SRLLEAGYVDSFRHV 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR G R N GWR+DYF+VS+SL ++ D+ I DV GSDH P+ LI+
Sbjct: 191 YPDLEGAYSWWSYRAGARDRNIGWRIDYFVVSESLKEQIEDAGISKDVMGSDHCPVELII 250
Query: 181 KL 182
+
Sbjct: 251 NI 252
>gi|451821030|ref|YP_007457231.1| exodeoxyribonuclease ExoA [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451787009|gb|AGF57977.1| exodeoxyribonuclease ExoA [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 252
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 127/182 (69%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV G+GIS+HD+EGR++TAE+D F+L++ Y PNS L RL YR+ W+ Y+
Sbjct: 73 EPISVKKGIGISEHDNEGRVITAEYDDFYLVTVYTPNSKQALERLDYRMV-WEDVFRKYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
KELE+KKPVI+ GDLN AH+EID+ NP NRR+AGFTDEER + L GF+DT+R
Sbjct: 132 KELEEKKPVIVCGDLNVAHKEIDLKNPKANRRNAGFTDEERDKM-SELLEAGFIDTYRHF 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ V G Y++W YR R N GWR+DYFL S+SL DK + I +V GSDH P+ L++
Sbjct: 191 YPDVEGVYSWWSYRFNARANNAGWRIDYFLTSESLKDKLEAAKIHTEVMGSDHCPVELVI 250
Query: 181 KL 182
L
Sbjct: 251 NL 252
>gi|418030667|ref|ZP_12669152.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp.
subtilis str. SC-8]
gi|351471726|gb|EHA31839.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp.
subtilis str. SC-8]
Length = 252
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 131/182 (71%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL V YG+G+ +HD EGR++T EF++ F+++ Y PNS GL R+ YR+ +W+ +L SY+
Sbjct: 73 EPLQVIYGIGVEEHDQEGRVITLEFENVFVMTVYTPNSRRGLERIDYRM-QWEEALLSYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL++KKPVIL GDLN AHQEID+ NP NR +AGF+D+ER +F FL GFVD+FR
Sbjct: 132 LELDQKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSDQERGAF-TRFLEAGFVDSFRHV 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR G R N GWR+DYF+VS+ L ++ D+ I DV GSDH P+ LI+
Sbjct: 191 YPDLEGAYSWWSYRAGARDRNIGWRIDYFVVSERLKEQIEDASISADVMGSDHCPVELII 250
Query: 181 KL 182
+
Sbjct: 251 NI 252
>gi|160933576|ref|ZP_02080964.1| hypothetical protein CLOLEP_02430 [Clostridium leptum DSM 753]
gi|156867453|gb|EDO60825.1| exodeoxyribonuclease III [Clostridium leptum DSM 753]
Length = 261
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 130/181 (71%), Gaps = 2/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLGI +HD EGR++T EF +F+L + Y PNS +GL+RLSYR+ EW+ + Y+
Sbjct: 83 EPLSVSYGLGIEEHDQEGRVITLEFPAFYLTTVYTPNSQEGLKRLSYRM-EWEDAFRDYL 141
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L+ KKPV++ GD+N AHQEID+ NP NR++AGFTDEER+ F + L+ GF+D++R+
Sbjct: 142 KGLDSKKPVVVCGDMNVAHQEIDLKNPKTNRKNAGFTDEERERF-SQLLAAGFIDSYRSL 200
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ + Y++W YR RK N GWR+DYFLVS + + D+ I V GSDH P+ L L
Sbjct: 201 YPEKIEYSWWSYRFNARKNNAGWRIDYFLVSDRIGGRIQDAKIHTQVMGSDHCPVELDLD 260
Query: 182 L 182
+
Sbjct: 261 I 261
>gi|440801517|gb|ELR22535.1| exodeoxyribonuclease III, putative [Acanthamoeba castellanii str.
Neff]
Length = 317
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 127/181 (70%), Gaps = 2/181 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KP+SVTYG+GI++HD EGR++T EFD F+L++ Y+PN+G L RL YR EW+ +Y
Sbjct: 136 VKPVSVTYGIGIAEHDGEGRVITTEFDRFYLVNTYIPNAGQKLERLGYR-QEWNKDFLAY 194
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K LE+ KPV+ GDLN AH +IDI NP N+++AGFT EER+ FG L GFVDTFR
Sbjct: 195 LKNLEQTKPVVWCGDLNVAHHDIDIANPKTNQKTAGFTKEERRDFG-QLLESGFVDTFRH 253
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
Q+ + +TYW R R N GWRLDYF+VS+ + S++ P+ GSDH PIGL++
Sbjct: 254 QNPDLQQFTYWSNRFNCRAKNLGWRLDYFVVSKDFLPECDKSFVRPNALGSDHCPIGLLV 313
Query: 181 K 181
+
Sbjct: 314 R 314
>gi|282877708|ref|ZP_06286523.1| exodeoxyribonuclease III [Prevotella buccalis ATCC 35310]
gi|281300280|gb|EFA92634.1| exodeoxyribonuclease III [Prevotella buccalis ATCC 35310]
Length = 249
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 126/178 (70%), Gaps = 2/178 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL+VTYGLGI +HD EGR++T E D FFL++ YVPNS D LRRL YR+ +W+ +YV
Sbjct: 73 PLNVTYGLGIDEHDHEGRVITMEMDDFFLITVYVPNSQDELRRLDYRM-QWEDDFRAYVM 131
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
+L+ KPVI+ GDLN AH+EID+ NP NRR+AGFTDEER+ L+ GFVDTFR +
Sbjct: 132 QLDAIKPVIICGDLNVAHEEIDLKNPKTNRRNAGFTDEEREKMTI-LLNNGFVDTFRHLY 190
Query: 123 RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
V Y++W YR R+ N GWR+DYFL+S+ L ++ D+ I ++ GSDH P+ L L
Sbjct: 191 PEQVTYSWWSYRFRAREKNAGWRIDYFLISERLKERLVDAKIHTEILGSDHCPVELEL 248
>gi|300726843|ref|ZP_07060273.1| exodeoxyribonuclease III [Prevotella bryantii B14]
gi|299775956|gb|EFI72536.1| exodeoxyribonuclease III [Prevotella bryantii B14]
Length = 250
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 129/181 (71%), Gaps = 2/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VTYG+ I DH+ EGR++T E+D+FFL++ Y PNS + L+RL+YR+ W+ +Y+
Sbjct: 72 KPLNVTYGIDIDDHNHEGRVITLEYDNFFLVTVYTPNSQNELKRLNYRMI-WEKDFQTYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+K+KP+I+ GD+N AHQEIDI NP N +SAGFTDEER+ LS GF DTFR +
Sbjct: 131 HKLDKRKPIIVCGDMNVAHQEIDIKNPKTNHKSAGFTDEEREKM-TQLLSNGFTDTFRFK 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ + Y++W YR R+ N GWR+DYFLVS + +K D+ I D+ GSDH P+ L ++
Sbjct: 190 YPEQITYSWWSYRFRAREKNAGWRIDYFLVSDRIKEKVLDAKIHTDIMGSDHCPVELTIE 249
Query: 182 L 182
L
Sbjct: 250 L 250
>gi|296330017|ref|ZP_06872501.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305676741|ref|YP_003868413.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296153056|gb|EFG93921.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305414985|gb|ADM40104.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 252
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 130/182 (71%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL V YG+GI +HD EGR++T EF++ F+++ Y PNS GL R+ YR+ +W+ +L SY+
Sbjct: 73 EPLRVMYGIGIEEHDQEGRVITLEFENLFVMTVYTPNSKRGLERIDYRM-QWEEALLSYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL+KKKPVIL GDLN AHQEID+ NP NR +AGF+D+ER +F L GFVD+FR
Sbjct: 132 LELDKKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSDQERGAF-TRLLEAGFVDSFRHV 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR G R N GWRLDYF+VS+ L ++ D+ I DV GSDH P+ L++
Sbjct: 191 YPDLEGAYSWWSYRAGARDRNIGWRLDYFVVSERLEEQIEDASISADVMGSDHCPVELMI 250
Query: 181 KL 182
+
Sbjct: 251 NI 252
>gi|260909404|ref|ZP_05916112.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 472 str. F0295]
gi|260636496|gb|EEX54478.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 472 str. F0295]
Length = 249
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 125/180 (69%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VTYG+GI HD EGR++T E +FFL++ Y PNS D LRRL YR+ +W+ +Y+
Sbjct: 72 KPLNVTYGIGIDQHDHEGRVITLEMPTFFLVTVYTPNSQDELRRLDYRM-QWEDDFQAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+K+KPVI+ GD+N AHQEID+ NP NRR+AGFTDEERQ L GF DTFR +
Sbjct: 131 HDLDKRKPVIVCGDMNVAHQEIDLKNPKTNRRNAGFTDEERQKM-TQLLGAGFTDTFRWK 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ + Y++W YR R+ N GWR+DYFLVS L + D+ I D+ GSDH P+ L LK
Sbjct: 190 YPEEITYSWWSYRFKARERNTGWRIDYFLVSDRLQSEVLDAKIHTDILGSDHCPVELELK 249
>gi|443711514|gb|ELU05263.1| hypothetical protein CAPTEDRAFT_159745 [Capitella teleta]
Length = 307
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 124/182 (68%), Gaps = 2/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYG+ +HD EGR++TAEFD F+ ++ YVPN+G GL RLSYR +WDP Y+
Sbjct: 127 EPLSVTYGIDKEEHDKEGRVITAEFDKFYFVTAYVPNAGRGLPRLSYRSEKWDPDFREYL 186
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L+ KKPV++ GDLN AH+EIDI NP N++SAGFT +ERQ F + L GFVD FR
Sbjct: 187 KNLDAKKPVVMCGDLNVAHKEIDIANPKSNKKSAGFTPQERQGF-SELLEAGFVDAFREL 245
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y+YW Y R N GWRLDYF+VS+ + D DS I +V GSDH P+ L++
Sbjct: 246 YPEETKKYSYWTYMGNARGKNVGWRLDYFVVSEKIKDGICDSLIRSEVMGSDHCPVVLLM 305
Query: 181 KL 182
+
Sbjct: 306 NI 307
>gi|345884610|ref|ZP_08836014.1| exodeoxyribonuclease [Prevotella sp. C561]
gi|345042603|gb|EGW46699.1| exodeoxyribonuclease [Prevotella sp. C561]
Length = 249
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 125/180 (69%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VTYG+ I +HD EGR++T E D F+L++ Y PNS DGLRRL YR+ +W+ +Y+
Sbjct: 72 KPLNVTYGIDIDEHDHEGRVITLEMDDFYLITVYTPNSQDGLRRLDYRM-KWEEDFQAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L+ KPVI+ GD+N AHQEID+ NP N ++AGFTDEER+ LS GF+DTFR
Sbjct: 131 HRLDAIKPVIVCGDMNVAHQEIDLKNPKTNHKNAGFTDEEREKM-TQLLSNGFIDTFRTL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R+ N GWR+DYFL+S+ L D+ D+ I ++ GSDH PI + LK
Sbjct: 190 YPEKVTYSWWSYRFRAREKNTGWRIDYFLISERLKDRLEDAKIHTEIMGSDHCPIEITLK 249
>gi|303237381|ref|ZP_07323951.1| exodeoxyribonuclease III [Prevotella disiens FB035-09AN]
gi|302482768|gb|EFL45793.1| exodeoxyribonuclease III [Prevotella disiens FB035-09AN]
Length = 250
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 128/181 (70%), Gaps = 2/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYGLGI +HD EGR++T E ++F+L++CY PNS DGL+RL YR+ W+ +Y+
Sbjct: 72 QPLNVTYGLGIEEHDHEGRVITLEMENFYLVTCYTPNSQDGLKRLEYRM-RWEDDFQTYI 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI+ GDLN AH+EID+ NP NR++AGF+DEER FL KGF+D+FR
Sbjct: 131 KRLDEKKPVIVCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKM-TQFLGKGFIDSFRTL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R+ N GWR+DYFL+S L + D+ I +V GSDH P+ + L
Sbjct: 190 YPEQVTYSWWSYRFKAREKNAGWRIDYFLLSDRLRAQLVDAKIHTEVYGSDHCPVEVELN 249
Query: 182 L 182
Sbjct: 250 F 250
>gi|239624599|ref|ZP_04667630.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520985|gb|EEQ60851.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 251
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 131/181 (72%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+G+ +HD+EGR++TAEF +++++CY PNS DGL RL YR+ +W+ +Y+
Sbjct: 73 EPLSVSYGIGMEEHDTEGRVITAEFPDYYVVTCYTPNSQDGLARLDYRM-KWEDDFLAYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEKKKPV+ GDLN AH+EID+ NP NR++AGFTDEER F + LS GF+DTFR
Sbjct: 132 KGLEKKKPVVFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKF-TDLLSAGFIDTFRYF 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R N GWR+DYF VS+SL D+ + I +V GSDH P+ L++
Sbjct: 191 YPDAEGIYSWWSYRFSARAKNAGWRIDYFCVSESLKDRLVSAAIHTEVMGSDHCPVELVM 250
Query: 181 K 181
+
Sbjct: 251 E 251
>gi|153853826|ref|ZP_01995182.1| hypothetical protein DORLON_01173 [Dorea longicatena DSM 13814]
gi|149753576|gb|EDM63507.1| exodeoxyribonuclease III [Dorea longicatena DSM 13814]
Length = 250
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 127/178 (71%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLGI +HD EGR++T EF+ F+ ++ Y PNS L RL YR+ W+ + +Y+
Sbjct: 72 EPLSVSYGLGIEEHDKEGRVITLEFEDFYFITVYTPNSQSELARLDYRM-RWEDAFLAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE+KKPVI GDLN AH+EID+ NP NR++AGFTDEER F N L+ GF+DTFR
Sbjct: 131 KKLEEKKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKF-TNLLNAGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR RK N GWR+DYF VS+SL D+ D+ IL ++ GSDH P+ L
Sbjct: 190 YPDAEGIYSWWSYRFSARKKNAGWRIDYFCVSESLKDRIKDAKILTEIMGSDHCPVEL 247
>gi|282880102|ref|ZP_06288822.1| exodeoxyribonuclease III [Prevotella timonensis CRIS 5C-B1]
gi|281305975|gb|EFA98015.1| exodeoxyribonuclease III [Prevotella timonensis CRIS 5C-B1]
Length = 249
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 127/180 (70%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP+ V+YGLGI +HD EGR++T E + FFL++ YVPNS D L+RL YR+ +W+ +Y+
Sbjct: 72 KPIHVSYGLGIEEHDQEGRVITLEMEDFFLITVYVPNSQDELKRLDYRM-KWEDDFRAYI 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L++ KPVI+ GDLN AH+EID+ NP N+R+AGFTDEER L GF+DTFR
Sbjct: 131 TQLDQIKPVIICGDLNVAHEEIDLKNPKTNKRNAGFTDEERNKM-TRLLDNGFIDTFRYL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ + Y++W YR R+ N GWR+DYFL+S+ L ++ HD+ I ++ GSDH P+ L LK
Sbjct: 190 YPEQITYSWWSYRFRAREKNAGWRIDYFLISERLKERLHDAKIHTEIMGSDHCPVELELK 249
>gi|281423696|ref|ZP_06254609.1| exodeoxyribonuclease III [Prevotella oris F0302]
gi|281402248|gb|EFB33079.1| exodeoxyribonuclease III [Prevotella oris F0302]
Length = 250
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 128/181 (70%), Gaps = 2/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P++VTYG+GI +HD EGR++T E+D+FFL++ Y PN+ DGLRRL YR+T W+ +Y+
Sbjct: 72 EPIAVTYGIGIDEHDHEGRVITLEYDNFFLVTVYTPNAQDGLRRLDYRMT-WEDDFQAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L+++KPVI+ GDLN AHQEID+ NP NRR+AGFTDEER LS GF DTFR
Sbjct: 131 HRLDEQKPVIVCGDLNVAHQEIDLKNPKSNRRNAGFTDEERDKM-TQLLSHGFTDTFRTL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R+ N GWR+DYFL+S L + D+ I ++ GSDH PI + L+
Sbjct: 190 YPEQVTYSWWSYRFRAREKNAGWRIDYFLISDRLRPQLKDASIHTEIFGSDHCPIEVDLE 249
Query: 182 L 182
L
Sbjct: 250 L 250
>gi|237733965|ref|ZP_04564446.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|229383046|gb|EEO33137.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 251
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 127/182 (69%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+ +YG+GI +HD EGR+VT E++ F+L++CY PNS + L+RL YR+ W+ +Y+
Sbjct: 72 KPLNYSYGIGIEEHDHEGRVVTLEYEKFYLVNCYTPNSQNELKRLDYRM-HWEEDFLAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEK KPVIL GDLN AHQEID+ NP NR++AGF+DEER N L GF+DT+R
Sbjct: 131 KSLEKSKPVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAKM-TNLLENGFIDTYRYL 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS L + +++I D+ GSDH P+GL +
Sbjct: 190 YPDQEGVYSWWSYRFNARKNNAGWRIDYFIVSDCLKEGIKEAFICTDILGSDHCPVGLEI 249
Query: 181 KL 182
L
Sbjct: 250 DL 251
>gi|167771017|ref|ZP_02443070.1| hypothetical protein ANACOL_02371 [Anaerotruncus colihominis DSM
17241]
gi|167666687|gb|EDS10817.1| exodeoxyribonuclease III [Anaerotruncus colihominis DSM 17241]
Length = 250
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/181 (53%), Positives = 127/181 (70%), Gaps = 3/181 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+ PL+VTYG+G+++HDSEGR++T E++ F+L++CY PN+ L RL YR+ +W+ +Y
Sbjct: 71 VPPLNVTYGIGMAEHDSEGRVITVEYEPFYLVNCYTPNAQRELARLEYRM-KWEDDFRAY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ L+ KKPV+L GDLN AHQEID+ NP NRR+AGF+DEER L+ GFVDTFRA
Sbjct: 130 LMSLDAKKPVVLCGDLNVAHQEIDLKNPKTNRRNAGFSDEERAKM-TELLAGGFVDTFRA 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ V G YT+W Y R TN GWR+DYF+VS+ L HDS I DV GSDH P+ L
Sbjct: 189 LYPDVTGAYTWWSYLRRARDTNAGWRIDYFIVSERLRGAVHDSRIRADVMGSDHCPVELD 248
Query: 180 L 180
L
Sbjct: 249 L 249
>gi|47097522|ref|ZP_00235061.1| exodeoxyribonuclease [Listeria monocytogenes str. 1/2a F6854]
gi|254914076|ref|ZP_05264088.1| exodeoxyribonuclease [Listeria monocytogenes J2818]
gi|254938390|ref|ZP_05270087.1| exodeoxyribonuclease [Listeria monocytogenes F6900]
gi|386044090|ref|YP_005962895.1| exodeoxyribonuclease III [Listeria monocytogenes 10403S]
gi|386047434|ref|YP_005965766.1| exodeoxyribonuclease III [Listeria monocytogenes J0161]
gi|386050759|ref|YP_005968750.1| exodeoxyribonuclease [Listeria monocytogenes FSL R2-561]
gi|404284278|ref|YP_006685175.1| exodeoxyribonuclease [Listeria monocytogenes SLCC2372]
gi|404411083|ref|YP_006696671.1| exodeoxyribonuclease [Listeria monocytogenes SLCC5850]
gi|405758833|ref|YP_006688109.1| exodeoxyribonuclease [Listeria monocytogenes SLCC2479]
gi|47014105|gb|EAL05099.1| exodeoxyribonuclease [Listeria monocytogenes str. 1/2a F6854]
gi|258611002|gb|EEW23610.1| exodeoxyribonuclease [Listeria monocytogenes F6900]
gi|293592096|gb|EFG00431.1| exodeoxyribonuclease [Listeria monocytogenes J2818]
gi|345534425|gb|AEO03866.1| exodeoxyribonuclease III [Listeria monocytogenes J0161]
gi|345537324|gb|AEO06764.1| exodeoxyribonuclease III [Listeria monocytogenes 10403S]
gi|346424605|gb|AEO26130.1| exodeoxyribonuclease [Listeria monocytogenes FSL R2-561]
gi|404230909|emb|CBY52313.1| exodeoxyribonuclease [Listeria monocytogenes SLCC5850]
gi|404233780|emb|CBY55183.1| exodeoxyribonuclease [Listeria monocytogenes SLCC2372]
gi|404236715|emb|CBY58117.1| exodeoxyribonuclease [Listeria monocytogenes SLCC2479]
Length = 251
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/183 (52%), Positives = 130/183 (71%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++PLSV YGLGI +HD+EGR++T EF+ FF+++ Y PNS L+RL YR+T ++ ++ Y
Sbjct: 71 VEPLSVQYGLGIPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYRMT-FEDAILEY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK L+K KPV+L GDLN AH+EID+ NP NR++AGF+DEER F A FL GF+D+FR
Sbjct: 130 VKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSA-FLDAGFIDSFRY 188
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + Y++W YR R N GWR+DYF+VS+ L DK D+ I DV GSDH P+ L
Sbjct: 189 FYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVLGSDHCPVELE 248
Query: 180 LKL 182
L L
Sbjct: 249 LNL 251
>gi|429735837|ref|ZP_19269760.1| exodeoxyribonuclease III [Selenomonas sp. oral taxon 138 str.
F0429]
gi|429156761|gb|EKX99382.1| exodeoxyribonuclease III [Selenomonas sp. oral taxon 138 str.
F0429]
Length = 250
Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 96/182 (52%), Positives = 129/182 (70%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLSV+YG+GI +HD+EGR++T EF+ +L++ Y PNS +GL RL YR+ W+ + ++
Sbjct: 71 LKPLSVSYGIGIEEHDNEGRVITMEFEDVYLVTVYTPNSKNGLLRLDYRMV-WEDAFRAF 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ +L KKPV++ GDLN AH EID+ NP NRR+AGFTDEER F L+ GFVDTFRA
Sbjct: 130 LLDLRAKKPVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGKF-TELLAAGFVDTFRA 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + G YT+W Y R+TN GWR+DYFLVS+ L D+ + I DV GSDH P+ L
Sbjct: 189 LYPDLTGAYTWWSYLRHARETNAGWRIDYFLVSEELRDRIAAAEIHADVFGSDHCPVSLT 248
Query: 180 LK 181
LK
Sbjct: 249 LK 250
>gi|166030570|ref|ZP_02233399.1| hypothetical protein DORFOR_00233 [Dorea formicigenerans ATCC
27755]
gi|346308967|ref|ZP_08851071.1| exodeoxyribonuclease [Dorea formicigenerans 4_6_53AFAA]
gi|166029572|gb|EDR48329.1| exodeoxyribonuclease III [Dorea formicigenerans ATCC 27755]
gi|345901516|gb|EGX71315.1| exodeoxyribonuclease [Dorea formicigenerans 4_6_53AFAA]
Length = 250
Score = 202 bits (513), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 126/181 (69%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV+YGLGI +HD EGR++T EF+ F+ ++ Y PNS L RL YR+ +W+ +Y+
Sbjct: 72 EPISVSYGLGIEEHDQEGRVITLEFEDFYFITVYTPNSQSELARLDYRM-KWEEDFLTYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE+ KPVI GDLN AH EID+ NP NR++AGFTDEERQ F L+ GFVDTFR
Sbjct: 131 KKLEETKPVIFCGDLNVAHTEIDLKNPKTNRKNAGFTDEERQKF-TELLNAGFVDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R N GWR+DYF VS+SL D+ D+ IL D+ GSDH P+ L +
Sbjct: 190 YPEQTGIYSWWSYRFSARAKNAGWRIDYFCVSESLKDRLEDAKILTDIMGSDHCPVELDI 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|46908012|ref|YP_014401.1| exodeoxyribonuclease [Listeria monocytogenes serotype 4b str.
F2365]
gi|47094151|ref|ZP_00231871.1| exodeoxyribonuclease [Listeria monocytogenes str. 4b H7858]
gi|217964070|ref|YP_002349748.1| exodeoxyribonuclease III [Listeria monocytogenes HCC23]
gi|226224385|ref|YP_002758492.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|254826392|ref|ZP_05231393.1| exodeoxyribonuclease [Listeria monocytogenes FSL J1-194]
gi|254933631|ref|ZP_05266990.1| exodeoxyribonuclease [Listeria monocytogenes HPB2262]
gi|255521086|ref|ZP_05388323.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes FSL J1-175]
gi|300766428|ref|ZP_07076383.1| exodeoxyribonuclease [Listeria monocytogenes FSL N1-017]
gi|386008552|ref|YP_005926830.1| exodeoxyribonuclease [Listeria monocytogenes L99]
gi|386027157|ref|YP_005947933.1| putative 3'-exo-deoxyribonuclease III [Listeria monocytogenes M7]
gi|386732521|ref|YP_006206017.1| exodeoxyribonuclease III [Listeria monocytogenes 07PF0776]
gi|404281392|ref|YP_006682290.1| exodeoxyribonuclease [Listeria monocytogenes SLCC2755]
gi|404287210|ref|YP_006693796.1| exodeoxyribonuclease [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|405750132|ref|YP_006673598.1| exodeoxyribonuclease [Listeria monocytogenes ATCC 19117]
gi|405753007|ref|YP_006676472.1| exodeoxyribonuclease [Listeria monocytogenes SLCC2378]
gi|405755941|ref|YP_006679405.1| exodeoxyribonuclease [Listeria monocytogenes SLCC2540]
gi|406704564|ref|YP_006754918.1| exodeoxyribonuclease [Listeria monocytogenes L312]
gi|417315430|ref|ZP_12102109.1| exodeoxyribonuclease III [Listeria monocytogenes J1816]
gi|422809864|ref|ZP_16858275.1| Exodeoxyribonuclease III [Listeria monocytogenes FSL J1-208]
gi|424714659|ref|YP_007015374.1| Exodeoxyribonuclease [Listeria monocytogenes serotype 4b str.
LL195]
gi|424823542|ref|ZP_18248555.1| Exodeoxyribonuclease III [Listeria monocytogenes str. Scott A]
gi|46881282|gb|AAT04578.1| exodeoxyribonuclease [Listeria monocytogenes serotype 4b str.
F2365]
gi|47017476|gb|EAL08289.1| exodeoxyribonuclease [Listeria monocytogenes str. 4b H7858]
gi|217333340|gb|ACK39134.1| exodeoxyribonuclease III [Listeria monocytogenes HCC23]
gi|225876847|emb|CAS05556.1| Putative 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|293585194|gb|EFF97226.1| exodeoxyribonuclease [Listeria monocytogenes HPB2262]
gi|293595632|gb|EFG03393.1| exodeoxyribonuclease [Listeria monocytogenes FSL J1-194]
gi|300512852|gb|EFK39944.1| exodeoxyribonuclease [Listeria monocytogenes FSL N1-017]
gi|307571362|emb|CAR84541.1| exodeoxyribonuclease [Listeria monocytogenes L99]
gi|328466425|gb|EGF37573.1| exodeoxyribonuclease III [Listeria monocytogenes J1816]
gi|332312222|gb|EGJ25317.1| Exodeoxyribonuclease III [Listeria monocytogenes str. Scott A]
gi|336023738|gb|AEH92875.1| putative 3'-exo-deoxyribonuclease III [Listeria monocytogenes M7]
gi|378752065|gb|EHY62652.1| Exodeoxyribonuclease III [Listeria monocytogenes FSL J1-208]
gi|384391279|gb|AFH80349.1| exodeoxyribonuclease III [Listeria monocytogenes 07PF0776]
gi|404219332|emb|CBY70696.1| exodeoxyribonuclease [Listeria monocytogenes ATCC 19117]
gi|404222207|emb|CBY73570.1| exodeoxyribonuclease [Listeria monocytogenes SLCC2378]
gi|404225141|emb|CBY76503.1| exodeoxyribonuclease [Listeria monocytogenes SLCC2540]
gi|404228027|emb|CBY49432.1| exodeoxyribonuclease [Listeria monocytogenes SLCC2755]
gi|404246139|emb|CBY04364.1| exodeoxyribonuclease [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406361594|emb|CBY67867.1| exodeoxyribonuclease [Listeria monocytogenes L312]
gi|424013843|emb|CCO64383.1| Exodeoxyribonuclease [Listeria monocytogenes serotype 4b str.
LL195]
Length = 251
Score = 202 bits (513), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 130/183 (71%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++PLSV YGLG+ +HD+EGR++T EF+ FF+++ Y PNS L+RL YR+T ++ ++ Y
Sbjct: 71 VEPLSVQYGLGVPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYRMT-FEDAILEY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK L+K KPV+L GDLN AH+EID+ NP NR++AGF+DEER F A FL GF+D+FR
Sbjct: 130 VKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSA-FLDAGFIDSFRY 188
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + Y++W YR R N GWR+DYF+VS+ L DK D+ I DV GSDH P+ L
Sbjct: 189 FYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVLGSDHCPVELE 248
Query: 180 LKL 182
L L
Sbjct: 249 LNL 251
>gi|167756678|ref|ZP_02428805.1| hypothetical protein CLORAM_02216 [Clostridium ramosum DSM 1402]
gi|167702853|gb|EDS17432.1| exodeoxyribonuclease III [Clostridium ramosum DSM 1402]
Length = 251
Score = 202 bits (513), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 127/182 (69%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+ +YG+GI +HD EGR+VT E++ F+L++CY PNS + L+RL YR+ W+ +Y+
Sbjct: 72 KPLNYSYGIGIEEHDHEGRVVTLEYEKFYLVNCYTPNSQNELKRLDYRM-HWEDDFLAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEK KPVIL GDLN AHQEID+ NP NR++AGF+DEER N L GF+DT+R
Sbjct: 131 KSLEKSKPVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAKM-TNLLENGFIDTYRYL 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS L + +++I D+ GSDH P+GL +
Sbjct: 190 YPDQEGVYSWWSYRFNARKNNAGWRIDYFIVSDCLKEGIKEAFICTDILGSDHCPVGLEI 249
Query: 181 KL 182
L
Sbjct: 250 DL 251
>gi|357060646|ref|ZP_09121414.1| exodeoxyribonuclease [Alloprevotella rava F0323]
gi|355375951|gb|EHG23219.1| exodeoxyribonuclease [Alloprevotella rava F0323]
Length = 259
Score = 202 bits (513), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 98/180 (54%), Positives = 126/180 (70%), Gaps = 3/180 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL+VTYGLG +HD EGR++T E D+FFL++ Y PNS D LRRL YR+T W+ + Y+
Sbjct: 82 PLNVTYGLGHEEHDHEGRVITLEMDNFFLITVYTPNSQDELRRLDYRMT-WEDAFREYLL 140
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
EL KKKPVI+ GDLN AHQEID+ NP NRR+AGFTDEER+ L+ GF DTFR +
Sbjct: 141 ELNKKKPVIVCGDLNVAHQEIDLKNPKTNRRNAGFTDEEREKM-TQLLNAGFTDTFRFFN 199
Query: 123 RGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ G Y++W YR R+ N GWR+DYFLVS L DK + I ++ GSDH P+ ++LK
Sbjct: 200 PDLTGAYSWWSYRFRAREKNAGWRIDYFLVSNCLNDKLVSASIHNEIFGSDHCPVEIVLK 259
>gi|290893090|ref|ZP_06556079.1| exodeoxyribonuclease [Listeria monocytogenes FSL J2-071]
gi|404408223|ref|YP_006690938.1| exodeoxyribonuclease [Listeria monocytogenes SLCC2376]
gi|290557450|gb|EFD90975.1| exodeoxyribonuclease [Listeria monocytogenes FSL J2-071]
gi|404242372|emb|CBY63772.1| exodeoxyribonuclease [Listeria monocytogenes SLCC2376]
Length = 251
Score = 202 bits (513), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 130/183 (71%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++PLSV YGLG+ +HD+EGR++T EF+ FF+++ Y PNS L+RL YR+T ++ ++ Y
Sbjct: 71 VEPLSVQYGLGVPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYRMT-FEDAILEY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK L+K KPV+L GDLN AH+EID+ NP NR++AGF+DEER F A FL GF+D+FR
Sbjct: 130 VKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSA-FLDAGFIDSFRY 188
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + Y++W YR R N GWR+DYF+VS+ L DK D+ I DV GSDH P+ L
Sbjct: 189 FYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVLGSDHCPVELE 248
Query: 180 LKL 182
L L
Sbjct: 249 LNL 251
>gi|355673738|ref|ZP_09059213.1| exodeoxyribonuclease [Clostridium citroniae WAL-17108]
gi|354814451|gb|EHE99051.1| exodeoxyribonuclease [Clostridium citroniae WAL-17108]
Length = 251
Score = 202 bits (513), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 129/180 (71%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV YG+G+ +HD+EGR++TAEF +++++CY PNS DGL RL YR+ +W+ SY+
Sbjct: 73 EPISVAYGIGMEEHDTEGRVITAEFPEYYVVTCYTPNSQDGLARLDYRM-KWEDDFLSYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEK KPVI GDLN AH+EID+ NP NR++AGFTDEER F + LS GF+DTFR
Sbjct: 132 KGLEKNKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKF-TDLLSAGFIDTFRYF 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR R N GWR+DYF VS+SL D+ + I D+ GSDH P+ L++
Sbjct: 191 YPDMEGIYSWWSYRFSARAKNAGWRIDYFCVSESLKDRLVSASIHTDIMGSDHCPVELVV 250
>gi|401564907|ref|ZP_10805765.1| exodeoxyribonuclease III [Selenomonas sp. FOBRC6]
gi|400188269|gb|EJO22440.1| exodeoxyribonuclease III [Selenomonas sp. FOBRC6]
Length = 250
Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 129/182 (70%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLSV+YG+GI +HD+EGR++T EF+ +L++ Y PNS +GL RL YR+ W+ + ++
Sbjct: 71 LKPLSVSYGIGIEEHDNEGRVITMEFEDVYLVTVYTPNSKNGLLRLDYRMV-WEDAFRAF 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ +L KKPV++ GDLN AH EID+ NP NRR+AGFTDEER F L+ GFVDTFRA
Sbjct: 130 LLDLRAKKPVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGKF-TELLAAGFVDTFRA 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + G YT+W Y R+TN GWR+DYFLVS+ L D+ + I D+ GSDH P+ L
Sbjct: 189 LYPDLTGAYTWWSYLRHARETNAGWRIDYFLVSEELRDRIAAAEIHADIFGSDHCPVSLT 248
Query: 180 LK 181
LK
Sbjct: 249 LK 250
>gi|417317886|ref|ZP_12104489.1| exodeoxyribonuclease III [Listeria monocytogenes J1-220]
gi|328473849|gb|EGF44679.1| exodeoxyribonuclease III [Listeria monocytogenes J1-220]
Length = 225
Score = 201 bits (512), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 130/183 (71%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++PLSV YGLG+ +HD+EGR++T EF+ FF+++ Y PNS L+RL YR+T ++ ++ Y
Sbjct: 45 VEPLSVQYGLGVPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYRMT-FEDAILEY 103
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK L+K KPV+L GDLN AH+EID+ NP NR++AGF+DEER F A FL GF+D+FR
Sbjct: 104 VKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSA-FLDAGFIDSFRY 162
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + Y++W YR R N GWR+DYF+VS+ L DK D+ I DV GSDH P+ L
Sbjct: 163 FYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVLGSDHCPVELE 222
Query: 180 LKL 182
L L
Sbjct: 223 LNL 225
>gi|429766260|ref|ZP_19298534.1| exodeoxyribonuclease III [Clostridium celatum DSM 1785]
gi|429185240|gb|EKY26229.1| exodeoxyribonuclease III [Clostridium celatum DSM 1785]
Length = 250
Score = 201 bits (512), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 127/181 (70%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YGLGI +HD EGR++T EF+ FF+++ Y PNS + L RL YR+ +W+ Y+
Sbjct: 72 EPLSVRYGLGIEEHDKEGRVITLEFEDFFMITVYTPNSQNELARLDYRM-KWEDDFKKYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEK KPVI+ GDLN AH+EID+ NP NR++AGFTDEER+ + L+ GF+DTFR
Sbjct: 131 KHLEKSKPVIVCGDLNVAHKEIDLKNPTTNRKNAGFTDEEREKL-TSLLNDGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS+SL D+ + I +V GSDH P+ L +
Sbjct: 190 YPETTGVYSWWSYRFNARKNNAGWRIDYFVVSESLKDRLESAKIHTEVLGSDHCPVELTI 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|154502978|ref|ZP_02040038.1| hypothetical protein RUMGNA_00800 [Ruminococcus gnavus ATCC 29149]
gi|153796517|gb|EDN78937.1| exodeoxyribonuclease III [Ruminococcus gnavus ATCC 29149]
Length = 250
Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 96/181 (53%), Positives = 127/181 (70%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VTYG+GI +HD EGR++T EF+ F+ ++ Y PNS + L RL YR+ +W+ +Y+
Sbjct: 72 KPLNVTYGIGIEEHDQEGRVITLEFEEFYFVTVYTPNSQNELARLDYRM-KWESDFLAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE++KPVI GDLN AH+EID+ NP NR++AGFTDEER F L+ GF+DTFR
Sbjct: 131 KKLEEEKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKF-TEMLNAGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R N GWR+DYF VS+ L D+ D+ IL DV GSDH PI L L
Sbjct: 190 YPDQEGIYSWWSYRFSARAKNAGWRIDYFCVSECLKDRLADAKILTDVMGSDHCPIELDL 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|346473687|gb|AEO36688.1| hypothetical protein [Amblyomma maculatum]
Length = 350
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/183 (53%), Positives = 125/183 (68%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPL V YG+G+ HD EGR++TAEFD F+L++ YVPN+G L RL YR+ EWD +Y
Sbjct: 170 IKPLDVKYGIGMEKHDKEGRVITAEFDKFYLVAVYVPNAGKKLVRLDYRM-EWDKDFRAY 228
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+KELE KK V+L GD+N AHQEID+ NP N+++AGFT EER F A L GFVD+FR
Sbjct: 229 LKELEAKKHVVLCGDMNVAHQEIDLANPKTNKKNAGFTQEERDGFTA-LLESGFVDSFRH 287
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G YT+W Y R N GWRLDYF++S++LA DS I V GSDH P+ L+
Sbjct: 288 LYPDKKGAYTFWTYMMNARAKNVGWRLDYFILSKALASNISDSLIHSQVMGSDHCPVILL 347
Query: 180 LKL 182
L +
Sbjct: 348 LNI 350
>gi|315606307|ref|ZP_07881323.1| exodeoxyribonuclease III [Prevotella buccae ATCC 33574]
gi|315251998|gb|EFU31971.1| exodeoxyribonuclease III [Prevotella buccae ATCC 33574]
Length = 249
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 127/180 (70%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VTYGLGI +HD EGR++T E + F+L++ Y PNS D LRRL+YR+T W+ Y+
Sbjct: 72 KPLNVTYGLGIEEHDHEGRVITLEMEDFYLITVYTPNSQDELRRLNYRMT-WEDDFLKYI 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+ L+ KKPVI+ GDLN AH+EID+ NP NRR+AGFTDEER+ L+ GF D+FR +
Sbjct: 131 QGLDAKKPVIVCGDLNVAHEEIDLKNPKTNRRNAGFTDEEREKMTIT-LNSGFTDSFRYK 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R+ N GWR+DYFL+S L D+ D+ I +V GSDH P+ L LK
Sbjct: 190 YPEQVTYSWWSYRFHAREKNAGWRIDYFLISNRLRDRLVDAKIHTEVYGSDHCPVELDLK 249
>gi|404413860|ref|YP_006699447.1| exodeoxyribonuclease [Listeria monocytogenes SLCC7179]
gi|404239559|emb|CBY60960.1| exodeoxyribonuclease [Listeria monocytogenes SLCC7179]
gi|441474667|emb|CCQ24421.1| Exodeoxyribonuclease [Listeria monocytogenes N53-1]
Length = 251
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 129/183 (70%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++PLSV YGLGI +HD+EGR++T EF+ FF+++ Y PNS L+RL YR+T ++ ++ Y
Sbjct: 71 VEPLSVQYGLGIPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYRMT-FEDAILEY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK L+K KPV+L GDLN AH+EID+ NP NR++AGF+DEER F A FL GF+D+FR
Sbjct: 130 VKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSA-FLDAGFIDSFRY 188
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + Y++W YR R N GWR+DYF+VS+ L DK D+ I DV GSDH P+ L
Sbjct: 189 FYPDLTDAYSWWSYRMNARARNTGWRIDYFIVSERLKDKLVDAKIHADVLGSDHCPVELE 248
Query: 180 LKL 182
L
Sbjct: 249 LNF 251
>gi|336433570|ref|ZP_08613387.1| exodeoxyribonuclease [Lachnospiraceae bacterium 2_1_58FAA]
gi|336016006|gb|EGN45803.1| exodeoxyribonuclease [Lachnospiraceae bacterium 2_1_58FAA]
Length = 250
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/181 (53%), Positives = 126/181 (69%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL++TYG+GI +HD EGR++T EF+ F+ ++ Y PNS + L RL YR+ +W+ +Y+
Sbjct: 72 KPLNMTYGIGIEEHDQEGRVITLEFEEFYFVTVYTPNSQNELARLDYRM-KWESDFLAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE+KKPVI GDLN AH+EID+ NP NR++AGFTDEER F L GF+DTFR
Sbjct: 131 KKLEEKKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKF-TEMLDAGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R N GWR+DYF VS+ L D+ D+ IL DV GSDH PI L L
Sbjct: 190 YPDQEGIYSWWSYRFSARAKNAGWRIDYFCVSECLKDRLADAKILTDVMGSDHCPIELDL 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|182416804|ref|ZP_02948195.1| exodeoxyribonuclease III [Clostridium butyricum 5521]
gi|237669009|ref|ZP_04528993.1| exodeoxyribonuclease III [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379266|gb|EDT76765.1| exodeoxyribonuclease III [Clostridium butyricum 5521]
gi|237657357|gb|EEP54913.1| exodeoxyribonuclease III [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 254
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 127/182 (69%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP+SV GLGI +HD+EGR++T E+D FFL++ Y PNS L RL YR++ W+ +Y+
Sbjct: 75 KPISVKMGLGIEEHDNEGRVITLEYDKFFLVNVYTPNSQQKLARLEYRMS-WEDVFRNYL 133
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LEK KPVIL GDLN AH+EID+ NP+ NR++AGF+DEER + L+ GF DTFR
Sbjct: 134 KDLEKNKPVILCGDLNVAHKEIDLKNPSSNRKNAGFSDEERSKM-SELLNSGFTDTFRYF 192
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR R N GWR+DYF+VSQSL DK D+ I + GSDH P+ L +
Sbjct: 193 YPDIEGVYSWWSYRFNARANNAGWRIDYFIVSQSLNDKLEDAKIHTSIEGSDHCPVELEI 252
Query: 181 KL 182
L
Sbjct: 253 NL 254
>gi|359406465|ref|ZP_09199155.1| exodeoxyribonuclease III [Prevotella stercorea DSM 18206]
gi|357555725|gb|EHJ37349.1| exodeoxyribonuclease III [Prevotella stercorea DSM 18206]
Length = 249
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 125/178 (70%), Gaps = 2/178 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PLSVTYG+GI +HD EGR++T E + F+L++CY PNS DGLRRL YR+ +W+ Y+K
Sbjct: 73 PLSVTYGIGIDEHDHEGRVITLEMEDFYLVTCYTPNSQDGLRRLDYRM-KWEDDFLQYIK 131
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L+ KKPVI+ GDLN AH+EID+ NP NR++AGFTDEE A FL +GF+DTFR H
Sbjct: 132 GLDAKKPVIVCGDLNVAHEEIDLKNPKTNRKNAGFTDEECAKMTA-FLGEGFIDTFRTLH 190
Query: 123 RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
Y++W YR R+ N GWR+DYF+ S+ L ++ + I +V GSDH P+ LIL
Sbjct: 191 PDDPTYSWWSYRFKAREKNAGWRIDYFITSERLRERITSAAIHNEVFGSDHCPVELIL 248
>gi|145534702|ref|XP_001453095.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420795|emb|CAK85698.1| unnamed protein product [Paramecium tetraurelia]
Length = 348
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 125/182 (68%), Gaps = 1/182 (0%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KP+SV +GIS HD EGR +TAE++ F+L++CYVPN+G L RL YR EWD +Y
Sbjct: 165 VKPISVKCDIGISKHDQEGRTLTAEYERFYLVACYVPNAGQKLERLDYRTKEWDVDFQNY 224
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+++L KKKP IL GDLN +H EID+ NPAGN+++AGFT EER F N+L KG+VD+FR
Sbjct: 225 LEDLRKKKPTILCGDLNVSHHEIDLANPAGNKKTAGFTQEERDQF-TNYLQKGWVDSFRH 283
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
H V Y+Y+ R +++N+GWRLDYF++++ D S I V GSDH PI +
Sbjct: 284 LHPKEVKYSYFSARFNSKQSNKGWRLDYFIINKESTDAIIMSDINTAVEGSDHVPIECEV 343
Query: 181 KL 182
L
Sbjct: 344 DL 345
>gi|315303668|ref|ZP_07874193.1| exodeoxyribonuclease III [Listeria ivanovii FSL F6-596]
gi|313627958|gb|EFR96566.1| exodeoxyribonuclease III [Listeria ivanovii FSL F6-596]
Length = 251
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/182 (52%), Positives = 132/182 (72%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YGLGI +HD+EGR++T EF++FF+++ Y PNS L+RL YR+T ++ ++ +YV
Sbjct: 72 EPLSVQYGLGIEEHDTEGRVITLEFENFFMVTVYTPNSQAELKRLDYRMT-FEDAILAYV 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+L++ KPVIL GDLN AH+EID+ NP NR++AGF+DEER F A FL GFVD+FR
Sbjct: 131 KKLDETKPVILCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFTA-FLEAGFVDSFRYF 189
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR R N GWR+DYF+VS+ L D D+ I PDV GSDH P+ L L
Sbjct: 190 YPDLEDAYSWWSYRMNARARNTGWRIDYFVVSERLKDNLVDAKIHPDVLGSDHCPVELEL 249
Query: 181 KL 182
+
Sbjct: 250 NV 251
>gi|288927024|ref|ZP_06420917.1| exodeoxyribonuclease III [Prevotella buccae D17]
gi|288336198|gb|EFC74586.1| exodeoxyribonuclease III [Prevotella buccae D17]
Length = 249
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 126/180 (70%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VTYGLGI +HD EGR++T E + F+L++ Y PNS D LRRL YR+T W+ Y+
Sbjct: 72 KPLNVTYGLGIEEHDHEGRVITLEMEDFYLITVYTPNSQDELRRLDYRMT-WEDDFLKYI 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+ L+ KKPVI+ GDLN AH+EID+ NP NRR+AGFTDEER+ L+ GF D+FR +
Sbjct: 131 QGLDAKKPVIVCGDLNVAHEEIDLKNPKTNRRNAGFTDEEREKMTIT-LNSGFTDSFRYK 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R+ N GWR+DYFL+S L D+ D+ I +V GSDH P+ L LK
Sbjct: 190 YPEQVTYSWWSYRFHAREKNAGWRIDYFLISNRLRDRLVDAKIHTEVYGSDHCPVELDLK 249
>gi|422422487|ref|ZP_16499440.1| exodeoxyribonuclease III [Listeria seeligeri FSL S4-171]
gi|313637385|gb|EFS02862.1| exodeoxyribonuclease III [Listeria seeligeri FSL S4-171]
Length = 251
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/182 (52%), Positives = 130/182 (71%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YGLGI +HD EGR++T EFD FF+++ Y PNS L+RL YR+T ++ ++ +YV
Sbjct: 72 EPLSVQYGLGIPEHDDEGRVITLEFDKFFMVTVYTPNSQAELKRLDYRMT-FEDAILAYV 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+L++ KPV+L GDLN AH+EID+ NP NR++AGF+DEER F A FL GFVD+FR
Sbjct: 131 KKLDETKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFTA-FLEAGFVDSFRYF 189
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR R N GWR+DYF+VS+ L D D+ I PDV GSDH P+ L L
Sbjct: 190 YPDLEDAYSWWSYRMNARARNTGWRIDYFVVSERLKDNLVDAKIHPDVLGSDHCPVELEL 249
Query: 181 KL 182
+
Sbjct: 250 NI 251
>gi|116873216|ref|YP_849997.1| exodeoxyribonuclease III [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742094|emb|CAK21218.1| exodeoxyribonuclease III [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 251
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/183 (51%), Positives = 131/183 (71%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++PLSV YGLGI +HD+EGR++T EF++FF+++ Y PNS L+RL YR+T ++ ++ Y
Sbjct: 71 VEPLSVQYGLGIPEHDTEGRVITLEFEAFFMVTVYTPNSQAELKRLDYRMT-FEDAILEY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K L+K KPV+L GDLN AH+EID+ NP NR++AGF+DEER F A FL GF+D+FR
Sbjct: 130 IKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSA-FLDAGFIDSFRY 188
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + Y++W YR R N GWR+DYF+VS+ L DK D+ I +V GSDH P+ L
Sbjct: 189 FYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSKRLKDKLVDAKIHSEVLGSDHCPVELE 248
Query: 180 LKL 182
L L
Sbjct: 249 LNL 251
>gi|366166303|ref|ZP_09466058.1| exodeoxyribonuclease III [Acetivibrio cellulolyticus CD2]
Length = 251
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 133/181 (73%), Gaps = 3/181 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP++V+YG+GI +HD EGR++T EFD +++++ Y PNS GL RL YR+ +W+ SY
Sbjct: 72 IKPITVSYGIGIEEHDKEGRVITLEFDEYYVVTVYTPNSQRGLTRLHYRM-KWEDDFLSY 130
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K LE+ KPVI+ GDLN AH+EID+ NP N+++AGFT+EER F + +++ GF+DTFR
Sbjct: 131 LKSLERYKPVIVCGDLNVAHKEIDLKNPQSNKKNAGFTEEERSKFDS-YVNNGFIDTFRY 189
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ +G YT+W Y R+ N GWR+DYF+VS+ + D+ D+ + ++TGSDH P+G++
Sbjct: 190 FYPDRIGVYTWWSYMFNSRQNNAGWRIDYFIVSERIKDRLKDALVYSEITGSDHCPVGIL 249
Query: 180 L 180
L
Sbjct: 250 L 250
>gi|16803822|ref|NP_465307.1| hypothetical protein lmo1782 [Listeria monocytogenes EGD-e]
gi|16411236|emb|CAC99860.1| lmo1782 [Listeria monocytogenes EGD-e]
Length = 251
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 129/183 (70%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++PLSV YGLGI +HD+EGR++T EF+ FF+++ Y PNS L+RL YR+T ++ ++ Y
Sbjct: 71 VEPLSVQYGLGIPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYRMT-FEDAILEY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK L+ KPV+L GDLN AH+EID+ NP NR++AGF+DEER F A FL GF+D+FR
Sbjct: 130 VKNLDNTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSA-FLDAGFIDSFRY 188
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + Y++W YR R N GWR+DYF+VS+ L DK D+ I DV GSDH P+ L
Sbjct: 189 FYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVLGSDHCPVELE 248
Query: 180 LKL 182
L L
Sbjct: 249 LNL 251
>gi|254854529|ref|ZP_05243877.1| exodeoxyribonuclease [Listeria monocytogenes FSL R2-503]
gi|258607929|gb|EEW20537.1| exodeoxyribonuclease [Listeria monocytogenes FSL R2-503]
Length = 251
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/183 (51%), Positives = 129/183 (70%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++PLSV YG G+ +HD+EGR++T EF+ FF+++ Y PNS L+RL YR+T ++ ++ Y
Sbjct: 71 VEPLSVQYGFGVPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYRMT-FEDAILEY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK L+K KPV+L GDLN AH+EID+ NP NR++AGF+DEER F A FL GF+D+FR
Sbjct: 130 VKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSA-FLDAGFIDSFRY 188
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + Y++W YR R N GWR+DYF+VS+ L DK D+ I DV GSDH P+ L
Sbjct: 189 FYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVLGSDHCPVELE 248
Query: 180 LKL 182
L L
Sbjct: 249 LNL 251
>gi|402308513|ref|ZP_10827517.1| exodeoxyribonuclease III [Prevotella sp. MSX73]
gi|400374964|gb|EJP27874.1| exodeoxyribonuclease III [Prevotella sp. MSX73]
Length = 242
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 126/180 (70%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VTYGLGI +HD EGR++T E + F+L++ Y PNS D LRRL YR+T W+ Y+
Sbjct: 65 KPLNVTYGLGIEEHDHEGRVITLEMEDFYLITVYTPNSQDELRRLDYRMT-WEDDFLKYI 123
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+ L+ KKPVI+ GDLN AH+EID+ NP NRR+AGFTDEER+ L+ GF D+FR +
Sbjct: 124 QGLDAKKPVIVCGDLNVAHEEIDLKNPKTNRRNAGFTDEEREKMTIT-LNSGFTDSFRYK 182
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R+ N GWR+DYFL+S L D+ D+ I +V GSDH P+ L LK
Sbjct: 183 YPEQVTYSWWSYRFHAREKNAGWRIDYFLISNRLRDRLVDAKIHTEVYGSDHCPVELDLK 242
>gi|357054575|ref|ZP_09115657.1| exodeoxyribonuclease [Clostridium clostridioforme 2_1_49FAA]
gi|355384175|gb|EHG31244.1| exodeoxyribonuclease [Clostridium clostridioforme 2_1_49FAA]
Length = 251
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 131/181 (72%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV+YG+G+ +HD+EGR++TAEF +++++CY PNS DGL RL YR+ +W+ +Y+
Sbjct: 73 EPMSVSYGIGMEEHDTEGRVITAEFPEYYVVTCYTPNSQDGLARLDYRM-KWEDDFLAYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LEK KPV+ GDLN AH+EID+ NP NR++AGFTDEER F + L+ GFVDTFR
Sbjct: 132 KKLEKNKPVVFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKF-TDLLAAGFVDTFRYF 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR R N GWR+DYF VS+SL D+ + I V GSDH P+ L++
Sbjct: 191 YPDLEGIYSWWSYRFSARAKNAGWRIDYFCVSESLKDRLVSASIHNTVMGSDHCPVELVI 250
Query: 181 K 181
+
Sbjct: 251 E 251
>gi|16800960|ref|NP_471228.1| hypothetical protein lin1894 [Listeria innocua Clip11262]
gi|422416297|ref|ZP_16493254.1| exodeoxyribonuclease III [Listeria innocua FSL J1-023]
gi|16414395|emb|CAC97124.1| lin1894 [Listeria innocua Clip11262]
gi|313623313|gb|EFR93545.1| exodeoxyribonuclease III [Listeria innocua FSL J1-023]
Length = 251
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/183 (51%), Positives = 130/183 (71%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++PLSV YGLG+ +HD+EGR++T EF+ F++++ Y PNS L+RL YR+T ++ ++ Y
Sbjct: 71 VEPLSVQYGLGVPEHDTEGRVITLEFEDFYMVTVYTPNSQAELKRLDYRMT-FEDAILEY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK L+K KPV+L GDLN AH+EID+ NP NR++AGF+DEER F A FL GF+D+FR
Sbjct: 130 VKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSA-FLDAGFIDSFRY 188
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + Y++W YR R N GWR+DYF+VS+ L DK D+ I DV GSDH P+ L
Sbjct: 189 FYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVLGSDHCPVELE 248
Query: 180 LKL 182
L L
Sbjct: 249 LNL 251
>gi|317501545|ref|ZP_07959741.1| exodeoxyribonuclease III Xth [Lachnospiraceae bacterium 8_1_57FAA]
gi|331088593|ref|ZP_08337504.1| exodeoxyribonuclease [Lachnospiraceae bacterium 3_1_46FAA]
gi|336440482|ref|ZP_08620069.1| exodeoxyribonuclease [Lachnospiraceae bacterium 1_1_57FAA]
gi|316897056|gb|EFV19131.1| exodeoxyribonuclease III Xth [Lachnospiraceae bacterium 8_1_57FAA]
gi|330407550|gb|EGG87050.1| exodeoxyribonuclease [Lachnospiraceae bacterium 3_1_46FAA]
gi|336012927|gb|EGN42818.1| exodeoxyribonuclease [Lachnospiraceae bacterium 1_1_57FAA]
Length = 250
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYG+GI +HD EGR++T EF+ F+ ++ Y PNS + L RL YR+ W+ Y+
Sbjct: 72 EPLSVTYGIGIEEHDQEGRVITCEFEDFYFVTVYTPNSQNELARLDYRM-RWEDDFRMYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE+KKPVI+TGD+N AH+EID+ NP NR++AGFTDEER F L GF+DTFR
Sbjct: 131 KKLEEKKPVIVTGDMNVAHKEIDLKNPKTNRKNAGFTDEERGKF-TELLDAGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR R N GWR+DYF VS+SL ++ D+ IL DV GSDH PI L
Sbjct: 190 YPDREGIYSWWSYRFSARAKNAGWRIDYFCVSESLKERLKDAKILTDVMGSDHCPIEL 247
>gi|443631581|ref|ZP_21115762.1| exodeoxyribonuclease III [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|443349386|gb|ELS63442.1| exodeoxyribonuclease III [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 252
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 129/182 (70%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P V YG+GI +HD EGR++T EF++ F+++ Y PN+ GL R+ YR+ +W+ L SY+
Sbjct: 73 EPQRVMYGIGIEEHDQEGRVITLEFENMFVMTVYTPNAKRGLERIDYRM-QWEEDLLSYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL++KKPVIL GDLN AHQEID+ NP NR +AGF+D+ER +F FL GF+D+FR
Sbjct: 132 LELDQKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSDQERGAF-TRFLEAGFIDSFRHV 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR G R N GWR+DYF+VS+ L D+ D+ I DV GSDH P+ L++
Sbjct: 191 YPDLEGAYSWWSYRAGARDRNIGWRIDYFVVSERLKDQIEDASISADVMGSDHCPVELMI 250
Query: 181 KL 182
+
Sbjct: 251 NI 252
>gi|347531556|ref|YP_004838319.1| exodeoxyribonuclease [Roseburia hominis A2-183]
gi|345501704|gb|AEN96387.1| exodeoxyribonuclease [Roseburia hominis A2-183]
Length = 255
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 129/182 (70%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YG+GI HD+EGR++T EF F++++CY PNS + L RLSYR+ EW+ + SY+
Sbjct: 72 EPLSVHYGIGIPQHDTEGRVITLEFPDFYMVTCYTPNSQNELARLSYRM-EWEDAFLSYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++ KP+IL GDLN AH+EID+ NP NR++AGFTDEER A LS GF DTFR
Sbjct: 131 KGLDRNKPLILCGDLNVAHEEIDLKNPKTNRKNAGFTDEERTKMTA-LLSAGFTDTFRHF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWR+DYF+ S +L D+ D+ IL DVTGSDH P+ L +
Sbjct: 190 YPDTEGIYSWWSYRFHAREKNAGWRIDYFITSSALDDRLVDAGILTDVTGSDHCPVTLTV 249
Query: 181 KL 182
L
Sbjct: 250 DL 251
>gi|153815015|ref|ZP_01967683.1| hypothetical protein RUMTOR_01232 [Ruminococcus torques ATCC 27756]
gi|145847583|gb|EDK24501.1| exodeoxyribonuclease III [Ruminococcus torques ATCC 27756]
Length = 252
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYG+GI +HD EGR++T EF+ F+ ++ Y PNS + L RL YR+ W+ Y+
Sbjct: 74 EPLSVTYGIGIEEHDQEGRVITCEFEDFYFVTVYTPNSQNELARLDYRM-RWEDDFRMYL 132
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE+KKPVI+TGD+N AH+EID+ NP NR++AGFTDEER F L GF+DTFR
Sbjct: 133 KKLEEKKPVIVTGDMNVAHKEIDLKNPKTNRKNAGFTDEERGKF-TELLDAGFIDTFRYF 191
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR R N GWR+DYF VS+SL ++ D+ IL DV GSDH PI L
Sbjct: 192 YPDREGIYSWWSYRFSARAKNAGWRIDYFCVSESLKERLKDAKILTDVMGSDHCPIEL 249
>gi|255523264|ref|ZP_05390235.1| exodeoxyribonuclease III Xth [Clostridium carboxidivorans P7]
gi|296186225|ref|ZP_06854630.1| exodeoxyribonuclease III [Clostridium carboxidivorans P7]
gi|255513132|gb|EET89401.1| exodeoxyribonuclease III Xth [Clostridium carboxidivorans P7]
gi|296049493|gb|EFG88922.1| exodeoxyribonuclease III [Clostridium carboxidivorans P7]
Length = 252
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 125/180 (69%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLS TYG+GI +HD EGR++T EFD F++++ Y PNS D L RL YR+ +W+ Y+
Sbjct: 72 KPLSFTYGIGIEEHDKEGRVITLEFDDFYMVTVYTPNSKDQLARLEYRM-KWENDFRDYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEK KPVI+ GDLN AH+EID+ NP NR++AGFTDEER+ F FLS GF+DT+R
Sbjct: 131 KSLEKNKPVIMCGDLNVAHKEIDLKNPKTNRKNAGFTDEEREKF-TEFLSAGFIDTYRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF VS L ++ + I +V GSDH P+ L++
Sbjct: 190 NPDKEGAYSWWSYRFNARKNNAGWRIDYFCVSDCLKERLVSADIHTEVMGSDHCPVELVI 249
>gi|404371536|ref|ZP_10976840.1| exodeoxyribonuclease III (xth) [Clostridium sp. 7_2_43FAA]
gi|226912337|gb|EEH97538.1| exodeoxyribonuclease III (xth) [Clostridium sp. 7_2_43FAA]
Length = 251
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/182 (52%), Positives = 128/182 (70%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSV+YGLGI +HD EGR++T EF++F++++ Y PNS + L RL YR+ W+ + Y+
Sbjct: 72 KPLSVSYGLGIEEHDKEGRVITLEFENFYMVTVYTPNSKNELARLDYRMV-WEDAFRDYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI+ GDLN AH+EID+ NP N R+AGFT+EER F L+ GFVDTFR
Sbjct: 131 KVLDEKKPVIVCGDLNVAHKEIDLKNPKTNLRNAGFTEEERSKF-TELLNAGFVDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ VG Y++W YR R N GWR+DYFLVS S+ DK D+ I +V GSDH P+ L +
Sbjct: 190 YPDEVGAYSWWSYRFNARAKNAGWRIDYFLVSNSVKDKLEDAKIHSEVLGSDHCPVELKI 249
Query: 181 KL 182
L
Sbjct: 250 NL 251
>gi|288929660|ref|ZP_06423504.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 317 str. F0108]
gi|288329165|gb|EFC67752.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 317 str. F0108]
Length = 249
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 124/180 (68%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+V+YG+GI HD EGR++T E +FFL++ Y PNS + LRRL YR+ +W+ +Y+
Sbjct: 72 KPLNVSYGIGIDQHDHEGRVITLEMPTFFLVTVYTPNSQEELRRLDYRM-QWEDDFQAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L+K KPVI+ GD+N AHQEID+ NP NRR+AGFTDEERQ L GF DTFR +
Sbjct: 131 HNLDKCKPVIVCGDMNVAHQEIDLKNPKTNRRNAGFTDEERQKM-TQLLDAGFTDTFRWK 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R+ N GWR+DYFLVS L + D+ I D+ GSDH P+ L+LK
Sbjct: 190 YPEEVTYSWWSYRFKARERNTGWRIDYFLVSNRLQAEVLDAKIHTDILGSDHCPVELLLK 249
>gi|289435119|ref|YP_003464991.1| exodeoxyribonuclease III [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171363|emb|CBH27905.1| exodeoxyribonuclease III [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 251
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 131/182 (71%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YGLGI +HD+EGR++T EF+ FF+++ Y PNS L+RL YR+T ++ ++ +YV
Sbjct: 72 EPLSVQYGLGIEEHDTEGRVITLEFEKFFMVTVYTPNSQAELKRLDYRMT-FEDAILAYV 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+L++ KPV+L GDLN AH+EID+ NP NR++AGF+DEER F A FL GFVD+FR
Sbjct: 131 KKLDETKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFTA-FLEAGFVDSFRYF 189
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR R N GWR+DYF+VS+ L D D+ I PDV GSDH P+ L L
Sbjct: 190 YPDLEDAYSWWSYRMNARARNIGWRIDYFVVSERLKDNLVDAKIHPDVLGSDHCPVELEL 249
Query: 181 KL 182
+
Sbjct: 250 NI 251
>gi|20808602|ref|NP_623773.1| exonuclease III [Thermoanaerobacter tengcongensis MB4]
gi|20517232|gb|AAM25377.1| Exonuclease III [Thermoanaerobacter tengcongensis MB4]
Length = 258
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/181 (54%), Positives = 125/181 (69%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSV+YG+G HD EGR++T E+ FFL++ Y PNS GL RL+YR+ EW+ SY+
Sbjct: 75 KPLSVSYGIGTPHHDKEGRVITLEYKKFFLVNAYTPNSQRGLTRLNYRM-EWEEDFRSYL 133
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+ KPVIL GDLN AHQEIDI NPA NRR+AGFTDEER+ L+ GF+DTFR
Sbjct: 134 LKLDSVKPVILCGDLNVAHQEIDIKNPAANRRNAGFTDEEREKMTI-LLNSGFIDTFRYF 192
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y H R+ N GWR+DYF+VS+ L D DS I +V GSDH P+ LI+
Sbjct: 193 YPDKKDAYTWWSYMHNAREKNIGWRVDYFIVSERLKDYLIDSQIHSEVMGSDHCPVVLIV 252
Query: 181 K 181
K
Sbjct: 253 K 253
>gi|422419400|ref|ZP_16496355.1| exodeoxyribonuclease III, partial [Listeria seeligeri FSL N1-067]
gi|313632791|gb|EFR99747.1| exodeoxyribonuclease III [Listeria seeligeri FSL N1-067]
Length = 251
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 131/182 (71%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YGLGI +HD+EGR++T EF+ FF+++ Y PNS L+RL YR+T ++ ++ +YV
Sbjct: 72 EPLSVQYGLGIEEHDTEGRVITLEFEKFFMVTVYTPNSQAELKRLDYRMT-FEDAILAYV 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+L++ KPV+L GDLN AH+EID+ NP NR++AGF+DEER F A FL GFVD+FR
Sbjct: 131 KKLDETKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFTA-FLEAGFVDSFRYF 189
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR R N GWR+DYF+VS+ L D D+ I PDV GSDH P+ L L
Sbjct: 190 YPDLEDAYSWWSYRMNARARNIGWRIDYFVVSERLKDNLVDAKIHPDVLGSDHCPVELEL 249
Query: 181 KL 182
+
Sbjct: 250 NI 251
>gi|317503938|ref|ZP_07961946.1| exodeoxyribonuclease III [Prevotella salivae DSM 15606]
gi|315664964|gb|EFV04623.1| exodeoxyribonuclease III [Prevotella salivae DSM 15606]
Length = 250
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 123/177 (69%), Gaps = 2/177 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V+YG+GI +HD EGR++T E+D FFL++ Y PN+ + LRRL YR+T W+ + +Y+
Sbjct: 72 EPLAVSYGIGIDEHDHEGRVITLEYDKFFLVTVYTPNAQEELRRLDYRMT-WEDAFQAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+ KKPVI+ GD+N AHQEID+ NP NRRSAGFTDEER LS GF DTFR
Sbjct: 131 HQLDAKKPVIVCGDMNVAHQEIDLKNPKTNRRSAGFTDEERSKM-TQLLSNGFTDTFRTL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
H + Y+YW YR R+ N GWR+DYFL+S L + + I ++ GSDH P+ L
Sbjct: 190 HPEQITYSYWSYRFRAREKNAGWRIDYFLISDRLRPQLKGASIHTEIYGSDHCPVEL 246
>gi|255280445|ref|ZP_05345000.1| exodeoxyribonuclease III [Bryantella formatexigens DSM 14469]
gi|255268910|gb|EET62115.1| exodeoxyribonuclease III [Marvinbryantia formatexigens DSM 14469]
Length = 253
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/184 (50%), Positives = 132/184 (71%), Gaps = 7/184 (3%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+GI +HD EGR++T EFD+++L++ Y PNS + L RL YR+T W+ + +Y+
Sbjct: 74 EPLSVSYGIGIEEHDQEGRVITLEFDTYYLVTVYTPNSQNELARLPYRMT-WEEAFLAYL 132
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFR-- 119
K LEK KPVI GDLN AH+EID+ NP NR++AGFTDEER+ F + L GF+DT+R
Sbjct: 133 KGLEKNKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEEREKF-SQILENGFIDTYRYF 191
Query: 120 -AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ GV Y++W YR R+ N GWR+DYF VS+ L D+ D+ I ++TGSDH P+ L
Sbjct: 192 YPEQEGV--YSWWSYRFRAREKNAGWRIDYFCVSECLKDRLVDARIHTEITGSDHCPVEL 249
Query: 179 ILKL 182
+++
Sbjct: 250 QIEV 253
>gi|323483337|ref|ZP_08088727.1| hypothetical protein HMPREF9474_00476 [Clostridium symbiosum
WAL-14163]
gi|323691163|ref|ZP_08105441.1| exodeoxyribonuclease III [Clostridium symbiosum WAL-14673]
gi|355627198|ref|ZP_09049134.1| exodeoxyribonuclease [Clostridium sp. 7_3_54FAA]
gi|323403435|gb|EGA95743.1| hypothetical protein HMPREF9474_00476 [Clostridium symbiosum
WAL-14163]
gi|323504773|gb|EGB20557.1| exodeoxyribonuclease III [Clostridium symbiosum WAL-14673]
gi|354820443|gb|EHF04859.1| exodeoxyribonuclease [Clostridium sp. 7_3_54FAA]
Length = 251
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 128/181 (70%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI HD EGR++TAEF +++++CY PNS DGL RL YR+ +W+ SY+
Sbjct: 73 EPLSVTYGLGIEAHDHEGRVITAEFPDYYVITCYTPNSQDGLARLPYRM-QWEDDFLSYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE+ KPVI GDLN AH+EID+ NP NR++AGFTDEER F L GF+DT+R
Sbjct: 132 KKLEEHKPVIFCGDLNVAHREIDLKNPKSNRKNAGFTDEERGKF-TQLLESGFIDTYRHF 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWR+DYF VS++L D+ + I ++ GSDH P+ L++
Sbjct: 191 YPDQEGIYSWWSYRFKAREKNAGWRIDYFCVSKALEDRLESAMIHTEIMGSDHCPVELVI 250
Query: 181 K 181
+
Sbjct: 251 R 251
>gi|429741842|ref|ZP_19275492.1| exodeoxyribonuclease III [Porphyromonas catoniae F0037]
gi|429158090|gb|EKY00657.1| exodeoxyribonuclease III [Porphyromonas catoniae F0037]
Length = 250
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/183 (53%), Positives = 129/183 (70%), Gaps = 7/183 (3%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+GI HD+EGR++T E+ F+L++ YVPNS D LRRL YR+T W+ +Y+
Sbjct: 72 EPLSVSYGIGIDHHDTEGRVITLEYTDFYLVTVYVPNSQDDLRRLGYRMT-WEDDFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL+KKKPVI+ GDLN AHQEID+ NP NRR+AGFTDEER F L GF+DTFR
Sbjct: 131 VELDKKKPVIVCGDLNVAHQEIDLKNPKSNRRNAGFTDEERGKF-QELLDAGFIDTFRYF 189
Query: 122 H---RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
H R + Y++W YR R+ N GWR+DYF+ SQ LA + + I ++ GSDH P+ L
Sbjct: 190 HPDQRDI--YSWWSYRFKARERNSGWRIDYFVTSQRLAPQLASAKIHTEIFGSDHCPVEL 247
Query: 179 ILK 181
+LK
Sbjct: 248 VLK 250
>gi|423100921|ref|ZP_17088626.1| exodeoxyribonuclease III [Listeria innocua ATCC 33091]
gi|370792563|gb|EHN60427.1| exodeoxyribonuclease III [Listeria innocua ATCC 33091]
Length = 256
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/183 (51%), Positives = 130/183 (71%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++PLSV YGLG+ +HD+EGR++T EF+ F++++ Y PNS L+RL YR+T ++ ++ Y
Sbjct: 76 VEPLSVQYGLGVPEHDTEGRVITLEFEDFYMVTVYTPNSQAELKRLDYRMT-FEDAILEY 134
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK L+K KPV+L GDLN AH+EID+ NP NR++AGF+DEER F A FL GF+D+FR
Sbjct: 135 VKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSA-FLDAGFIDSFRY 193
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + Y++W YR R N GWR+DYF+VS+ L DK D+ I DV GSDH P+ L
Sbjct: 194 FYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVLGSDHCPVELE 253
Query: 180 LKL 182
L L
Sbjct: 254 LNL 256
>gi|365832959|ref|ZP_09374485.1| exodeoxyribonuclease III (xth) [Coprobacillus sp. 3_3_56FAA]
gi|374627690|ref|ZP_09700093.1| exodeoxyribonuclease III (xth) [Coprobacillus sp. 8_2_54BFAA]
gi|365259792|gb|EHM89775.1| exodeoxyribonuclease III (xth) [Coprobacillus sp. 3_3_56FAA]
gi|373913138|gb|EHQ44980.1| exodeoxyribonuclease III (xth) [Coprobacillus sp. 8_2_54BFAA]
Length = 251
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 127/182 (69%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+ +YG+GI +HD EGR+VT E++ F+L++CY PNS + L+RL YR+ W+ +Y+
Sbjct: 72 KPLNYSYGIGIEEHDHEGRVVTLEYEKFYLVNCYTPNSQNELKRLDYRM-HWEDDFLAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEK KPVIL GDLN A+QEID+ NP NR++AGF+DEER N L GF+DT+R
Sbjct: 131 KSLEKSKPVILCGDLNVAYQEIDLKNPKTNRKNAGFSDEERAKM-TNLLENGFIDTYRYL 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS L + +++I D+ GSDH P+GL +
Sbjct: 190 YPDQEGVYSWWSYRFNARKNNAGWRIDYFIVSDCLKEGIKEAFICTDILGSDHCPVGLEI 249
Query: 181 KL 182
L
Sbjct: 250 DL 251
>gi|422413323|ref|ZP_16490282.1| exodeoxyribonuclease III, partial [Listeria innocua FSL S4-378]
gi|313618350|gb|EFR90386.1| exodeoxyribonuclease III [Listeria innocua FSL S4-378]
Length = 253
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/183 (51%), Positives = 130/183 (71%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++PLSV YGLG+ +HD+EGR++T EF+ F++++ Y PNS L+RL YR+T ++ ++ Y
Sbjct: 73 VEPLSVQYGLGVPEHDTEGRVITLEFEDFYMVTVYTPNSQAELKRLDYRMT-FEDAILEY 131
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK L+K KPV+L GDLN AH+EID+ NP NR++AGF+DEER F A FL GF+D+FR
Sbjct: 132 VKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSA-FLDAGFIDSFRY 190
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + Y++W YR R N GWR+DYF+VS+ L DK D+ I DV GSDH P+ L
Sbjct: 191 FYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVLGSDHCPVELE 250
Query: 180 LKL 182
L L
Sbjct: 251 LNL 253
>gi|323141860|ref|ZP_08076721.1| exodeoxyribonuclease III [Phascolarctobacterium succinatutens YIT
12067]
gi|322413607|gb|EFY04465.1| exodeoxyribonuclease III [Phascolarctobacterium succinatutens YIT
12067]
Length = 236
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 125/182 (68%), Gaps = 2/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPL+VTYGLG +HD EGR++T EF SF+L++ Y PNS DGL RL YR+ W+ +Y
Sbjct: 57 VKPLAVTYGLGQEEHDKEGRVITLEFASFYLVTVYTPNSKDGLARLDYRMV-WEDVFRAY 115
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++EL+ KKPV++ GDLN A +EID+ NP NRR+AGFTDEER F + GF D+FR
Sbjct: 116 LQELDAKKPVVVCGDLNVAAEEIDLKNPKTNRRNAGFTDEERAKF-RELKAAGFTDSFRY 174
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
H V Y++W YR R+ N GWR+DYF+VS +ADK + I +V GSDH P+ + L
Sbjct: 175 LHPEEVKYSWWSYRFKAREKNAGWRIDYFVVSDRIADKLQSAEIHNEVFGSDHCPVSIEL 234
Query: 181 KL 182
+
Sbjct: 235 DV 236
>gi|257437815|ref|ZP_05613570.1| exodeoxyribonuclease III [Faecalibacterium prausnitzii A2-165]
gi|257199738|gb|EEU98022.1| exodeoxyribonuclease III [Faecalibacterium prausnitzii A2-165]
Length = 263
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 124/180 (68%), Gaps = 2/180 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL+VT G+G +HD EGR++T E+ F+L++CY PNS DGL+RL YR+T W+ + +Y+
Sbjct: 86 PLAVTTGIGREEHDHEGRVLTLEYPGFYLVNCYTPNSQDGLKRLDYRMT-WEDAFRAYLL 144
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
EL+ KKPVIL GDLN AH EIDI N NR SAGFTD+ER L+ GF DTFRA H
Sbjct: 145 ELDAKKPVILCGDLNVAHTEIDIKNAKTNRMSAGFTDQERAKM-TELLAAGFTDTFRAVH 203
Query: 123 RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
V Y++W YR R+ N GWR+DYF+VS +ADK + I +V GSDH P+ L++ L
Sbjct: 204 PDEVKYSWWSYRFHAREKNAGWRIDYFIVSNRIADKVTAAEIHNEVFGSDHCPVELVIDL 263
>gi|419718967|ref|ZP_14246261.1| exodeoxyribonuclease III [Lachnoanaerobaculum saburreum F0468]
gi|383304836|gb|EIC96227.1| exodeoxyribonuclease III [Lachnoanaerobaculum saburreum F0468]
Length = 252
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 128/182 (70%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP++VTYG+GI +HD+EGR++TAE+D F+L++CY PNS GL RL YR+T W+ + YV
Sbjct: 73 KPINVTYGIGIDEHDNEGRVITAEYDEFYLITCYTPNSQRGLTRLDYRMT-WEDAFLDYV 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+LE+KKPVI GDLN AH+EID+ NP NR++AGFTDEER LS GFVD+FR
Sbjct: 132 LKLEEKKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERAKMDI-ILSSGFVDSFRVL 190
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W Y G R N GWR+DYF+VS L D+ ++ I +V GSDH P+ L +
Sbjct: 191 YPDKTDAYSWWSYMGGARAKNVGWRIDYFIVSAKLKDRIKEAKIHSEVLGSDHCPVELDI 250
Query: 181 KL 182
++
Sbjct: 251 EI 252
>gi|373115658|ref|ZP_09529827.1| exodeoxyribonuclease III (xth) [Lachnospiraceae bacterium
7_1_58FAA]
gi|371670180|gb|EHO35266.1| exodeoxyribonuclease III (xth) [Lachnospiraceae bacterium
7_1_58FAA]
Length = 250
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 125/181 (69%), Gaps = 3/181 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++PLSVT G+G+ HD EGR++TAEFD FFL+ CY PN+ + L R+ YR+ +W+ +Y
Sbjct: 71 VEPLSVTCGIGLDAHDHEGRVITAEFDGFFLVCCYTPNAQNELARIDYRM-QWEDDFRAY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ EL+KKKPV+L GDLN AH+EID+ NP NR SAGF+D+ER LS GF DTFRA
Sbjct: 130 LMELDKKKPVVLCGDLNVAHEEIDLKNPKSNRGSAGFSDQERGKM-TELLSSGFTDTFRA 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G YT+W YR RK N GWR+DYF+VS L + D+ I +V GSDH P+ L+
Sbjct: 189 LYPDRTGAYTWWSYRFNARKNNAGWRIDYFIVSDRLLPRVRDNIIHAEVEGSDHCPVELV 248
Query: 180 L 180
L
Sbjct: 249 L 249
>gi|224024813|ref|ZP_03643179.1| hypothetical protein BACCOPRO_01544 [Bacteroides coprophilus DSM
18228]
gi|224018043|gb|EEF76047.1| hypothetical protein BACCOPRO_01544 [Bacteroides coprophilus DSM
18228]
Length = 251
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 129/183 (70%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPL+VTYGLGI HD EGR++T E D+F+L++ Y PNS DGL+RL YR+T W+ +Y
Sbjct: 71 LKPLNVTYGLGIDVHDHEGRVITLEMDNFYLVTVYTPNSQDGLKRLDYRMT-WEDDFRNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ EL+KKKPV++ GDLN AH+EID+ NP NR +AGFTD+ER+ F L GF+DTFR
Sbjct: 130 LLELDKKKPVLVCGDLNVAHKEIDLKNPKTNRMNAGFTDQEREKFQI-LLDAGFIDTFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G Y++W YR R+ N GWR+DYFL S+ LADK + I ++ GSDH P+ +
Sbjct: 189 FYPEQTGIYSWWSYRFKAREKNAGWRIDYFLASRRLADKLESAKIHTEIFGSDHCPVEVT 248
Query: 180 LKL 182
L +
Sbjct: 249 LNV 251
>gi|281422472|ref|ZP_06253471.1| exodeoxyribonuclease III [Prevotella copri DSM 18205]
gi|281403455|gb|EFB34135.1| exodeoxyribonuclease III [Prevotella copri DSM 18205]
Length = 250
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 125/179 (69%), Gaps = 2/179 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+V+YG+G+ +HD EGR++T E+D F+L++CY PNS L+RL YR+T W+ ++
Sbjct: 72 KPLNVSYGMGVEEHDHEGRIITLEYDQFYLVTCYTPNSQTELKRLDYRMT-WEDDFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L+ KKPVI+ GDLN AH+EIDI NP NRR+AGFTDEER+ L+ GF D+FR
Sbjct: 131 KSLDAKKPVIICGDLNVAHEEIDIKNPKTNRRNAGFTDEEREKMTV-LLNDGFTDSFRYL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
H V Y++W YR R+ N GWR+DYFLVS + ++ ++ I ++ GSDH P+ + L
Sbjct: 190 HPDEVTYSWWSYRFKAREKNAGWRIDYFLVSDRIKEQITEAKIHTEIMGSDHCPVEVDL 248
>gi|374295499|ref|YP_005045690.1| exodeoxyribonuclease III [Clostridium clariflavum DSM 19732]
gi|359824993|gb|AEV67766.1| exodeoxyribonuclease III [Clostridium clariflavum DSM 19732]
Length = 251
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 131/182 (71%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++P+SV+YG+GI +HD+EGR++T EFD +++++ Y PNS GL RL YR+ +W+ +Y
Sbjct: 72 VEPVSVSYGIGIEEHDNEGRVITLEFDDYYVITVYTPNSQKGLTRLDYRM-KWEDDFLAY 130
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K LE+ KPVI+ GD N AH+EID+ NP NR++AGFTDEER F N+++ GF+D+FR
Sbjct: 131 LKALERNKPVIVCGDFNVAHKEIDLKNPQSNRKNAGFTDEERSKFD-NYINNGFIDSFRY 189
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G YT+W Y R+ N GWR+DYFL+S + ++ D+ I +V GSDH P+G+I
Sbjct: 190 LYPDKTGAYTWWSYMFNARQNNAGWRIDYFLLSDCIKERLKDALIYSEVMGSDHCPVGII 249
Query: 180 LK 181
++
Sbjct: 250 IE 251
>gi|323344424|ref|ZP_08084649.1| exodeoxyribonuclease III [Prevotella oralis ATCC 33269]
gi|323094551|gb|EFZ37127.1| exodeoxyribonuclease III [Prevotella oralis ATCC 33269]
Length = 249
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 126/179 (70%), Gaps = 2/179 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL+VTYG+GI +HD EGR++T E ++FFL++ Y PNS D LRRL YR+ W+ +Y+
Sbjct: 73 PLNVTYGMGIDEHDHEGRVITLETENFFLVTVYTPNSQDELRRLEYRM-RWEDDFKAYLL 131
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L+ +KPVI+ GD+N AH+EIDI NP NRR+AGFTDEER+ L+ GF+DTFR +
Sbjct: 132 ALDARKPVIVCGDMNVAHEEIDIKNPKTNRRNAGFTDEEREKM-TELLAGGFIDTFRTLY 190
Query: 123 RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
V Y++W YR R+ N GWR+DYFL+S+ L ++ D+ I D+ GSDH PI L L+
Sbjct: 191 PEQVTYSWWSYRFRARERNTGWRIDYFLISERLKERIADAKIHTDIYGSDHCPIELDLR 249
>gi|304438523|ref|ZP_07398463.1| exodeoxyribonuclease III [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304368606|gb|EFM22291.1| exodeoxyribonuclease III [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 250
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 126/182 (69%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLSV YG+GI +HD EGR++T EF+ +L++ Y PN+ L RL YR+T W+ + ++
Sbjct: 71 VKPLSVAYGIGIPEHDHEGRVITMEFNDVYLVTVYTPNAKRALERLDYRMT-WEDAFRAF 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ +L KKPV++ GDLN AH EID+ NP NRR+AGFTDEER F L+ GFVDTFRA
Sbjct: 130 LLDLRAKKPVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGKF-TELLNAGFVDTFRA 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + G YT+W Y R+TN GWR+DYFLVS+ L D+ + I DV GSDH P+ L
Sbjct: 189 LYPDLTGAYTWWSYLRHARETNAGWRIDYFLVSEELRDRIAAAEIHADVFGSDHCPVSLT 248
Query: 180 LK 181
LK
Sbjct: 249 LK 250
>gi|392960130|ref|ZP_10325603.1| exodeoxyribonuclease III Xth [Pelosinus fermentans DSM 17108]
gi|392455642|gb|EIW32426.1| exodeoxyribonuclease III Xth [Pelosinus fermentans DSM 17108]
Length = 250
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 119/179 (66%), Gaps = 3/179 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I PLSVTYGL I +HD EGR++T EF+ FFL++ Y PNS L RL YR+ W+ +Y
Sbjct: 71 ITPLSVTYGLNIEEHDQEGRIITLEFEDFFLVNVYTPNSKRELLRLDYRM-RWEDEFRTY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ L++ KPVI+ GD+N AHQEIDI NP NRR+AGFTDEER A L GF DTFR
Sbjct: 130 LTALDQSKPVIICGDINVAHQEIDIKNPKTNRRNAGFTDEERDKMTA-LLEAGFTDTFRH 188
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ + YT+W Y R N GWR+DYFLVS +L D ++ I PDV GSDH PIGL
Sbjct: 189 IYPDKIDAYTWWSYMMNARARNIGWRIDYFLVSNTLRDAIKEATIYPDVMGSDHCPIGL 247
>gi|311070625|ref|YP_003975548.1| exodeoxyribonuclease III [Bacillus atrophaeus 1942]
gi|419820989|ref|ZP_14344593.1| exodeoxyribonuclease III [Bacillus atrophaeus C89]
gi|310871142|gb|ADP34617.1| exodeoxyribonuclease III [Bacillus atrophaeus 1942]
gi|388474900|gb|EIM11619.1| exodeoxyribonuclease III [Bacillus atrophaeus C89]
Length = 252
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 128/182 (70%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYGLGI +HD EGRL+T EF++ ++++ Y PN+ GL R+ YR+ +W+ + SY+
Sbjct: 73 EPLAVTYGLGIKEHDQEGRLITLEFENMYVITVYTPNAKRGLERIDYRM-DWEDAFLSYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L+ KKPV+L GDLN AHQEID+ NP NR++AGF+D+ER+ F + L +GF+DTFR
Sbjct: 132 KALDVKKPVVLCGDLNVAHQEIDLKNPKANRKNAGFSDQERERF-SQMLEEGFIDTFRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
H G Y++W YR R N GWRLDYF+VS+ L + + I +V GSDH P+ L +
Sbjct: 191 HPDQEGAYSWWSYRMNARAKNVGWRLDYFIVSERLKKQIRGAKICNEVMGSDHCPVELTI 250
Query: 181 KL 182
L
Sbjct: 251 DL 252
>gi|254829588|ref|ZP_05234275.1| exodeoxyribonuclease [Listeria monocytogenes FSL N3-165]
gi|284802226|ref|YP_003414091.1| hypothetical protein LM5578_1982 [Listeria monocytogenes 08-5578]
gi|284995368|ref|YP_003417136.1| hypothetical protein LM5923_1933 [Listeria monocytogenes 08-5923]
gi|386054035|ref|YP_005971593.1| exodeoxyribonuclease III [Listeria monocytogenes Finland 1998]
gi|258602005|gb|EEW15330.1| exodeoxyribonuclease [Listeria monocytogenes FSL N3-165]
gi|284057788|gb|ADB68729.1| hypothetical protein LM5578_1982 [Listeria monocytogenes 08-5578]
gi|284060835|gb|ADB71774.1| hypothetical protein LM5923_1933 [Listeria monocytogenes 08-5923]
gi|346646686|gb|AEO39311.1| exodeoxyribonuclease III [Listeria monocytogenes Finland 1998]
Length = 251
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 94/183 (51%), Positives = 128/183 (69%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++PLSV YGLGI +HD+EGR++T EF+ FF+++ Y PNS L+RL YR+T ++ ++ Y
Sbjct: 71 VEPLSVQYGLGIPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYRMT-FEDAILEY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK L+ KPV+L GDLN AH+EID+ NP NR++AGF+DEER F A FL GF+D+FR
Sbjct: 130 VKNLDNTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSA-FLDAGFIDSFRY 188
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + Y++W YR R N GWR+DYF+VS+ L DK D+ I DV GSDH P+ L
Sbjct: 189 FYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVLGSDHCPVELE 248
Query: 180 LKL 182
L
Sbjct: 249 LNF 251
>gi|283796572|ref|ZP_06345725.1| exodeoxyribonuclease III [Clostridium sp. M62/1]
gi|291075985|gb|EFE13349.1| exodeoxyribonuclease III [Clostridium sp. M62/1]
gi|295092540|emb|CBK78647.1| exodeoxyribonuclease III [Clostridium cf. saccharolyticum K10]
gi|295115277|emb|CBL36124.1| exodeoxyribonuclease III [butyrate-producing bacterium SM4/1]
Length = 251
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 130/181 (71%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV YGLGI HD EGR++TAE++ +++L+CY PNS + L RL YR+ EW+ + +Y+
Sbjct: 73 EPISVVYGLGIDAHDHEGRVITAEYEDYYVLTCYTPNSQNELARLPYRM-EWEDAFLAYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE+KKPVI GDLN AH+EID+ NP NR++AGFTDEER F A L GF+DT+R
Sbjct: 132 KKLEEKKPVIFCGDLNVAHREIDLKNPRTNRKNAGFTDEERGKFSA-LLDAGFIDTYRHF 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWR+DYF VS+SL D+ + I ++ GSDH P+ L++
Sbjct: 191 YPDTEGVYSWWSYRFKAREKNAGWRIDYFCVSESLEDRLVSASIHTEIMGSDHCPVELVI 250
Query: 181 K 181
K
Sbjct: 251 K 251
>gi|340624333|ref|YP_004742786.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis X1]
gi|339904601|gb|AEK20043.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis X1]
Length = 249
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 125/181 (69%), Gaps = 2/181 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP V+YG+G ++HD EGR++T +FD ++LL+ Y PNS GL RL YR +WD +Y
Sbjct: 71 IKPNEVSYGIGNNEHDGEGRVITLKFDEYYLLNVYTPNSQRGLTRLEYR-QKWDQDFLNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK LE KKPVI GDLN AH+EID+ NP N ++AGFT EER F N ++ GF+DTFR
Sbjct: 130 VKTLENKKPVIFCGDLNVAHKEIDLKNPKTNVKNAGFTPEERNGFD-NIVNSGFLDTFRE 188
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
++ Y++W YR R N GWR+DYF +S+SL D++I+P+V GSDH P+G+I
Sbjct: 189 FNKEPDNYSWWSYRFNARAKNIGWRIDYFCISKSLKGNLKDAFIMPEVMGSDHCPVGIIF 248
Query: 181 K 181
+
Sbjct: 249 E 249
>gi|229086305|ref|ZP_04218483.1| Exodeoxyribonuclease [Bacillus cereus Rock3-44]
gi|228697000|gb|EEL49807.1| Exodeoxyribonuclease [Bacillus cereus Rock3-44]
Length = 252
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 129/182 (70%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGRL+T EF+ F++L+ Y PN+ GL RL YR+ +W+ + SY+
Sbjct: 73 EPLSVTYGLGIEEHDQEGRLITLEFEDFYMLTLYTPNAKRGLERLDYRM-KWEEDILSYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+KKKPVI GDLN AH+EID+ NP NR++ GF+D+ER+ F L +GF+DT+R
Sbjct: 132 TKLDKKKPVIFCGDLNVAHKEIDLKNPKTNRKNPGFSDQERKRF-TQILDEGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R N GWRLDYF+VS+ L DK D+ I +V GSDH P+ L +
Sbjct: 191 YPDREGAYSWWSYRMNARAKNIGWRLDYFIVSERLKDKIVDAKINSEVMGSDHCPVELNM 250
Query: 181 KL 182
+L
Sbjct: 251 EL 252
>gi|225420139|ref|ZP_03762442.1| hypothetical protein CLOSTASPAR_06482 [Clostridium asparagiforme
DSM 15981]
gi|225041196|gb|EEG51442.1| hypothetical protein CLOSTASPAR_06482 [Clostridium asparagiforme
DSM 15981]
Length = 251
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 128/181 (70%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV YGLGI +HD EGR++ AEF +F+++CY PNS DGL RL YR+ EW+ + +Y+
Sbjct: 73 EPVSVRYGLGIEEHDMEGRVIAAEFQEYFVVTCYTPNSQDGLARLDYRM-EWENAFLAYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE++KPVI GDLN AH+EID+ NP NR++AGFTDEER F + L GF+DTFR
Sbjct: 132 KKLEEEKPVIFCGDLNVAHKEIDLKNPKSNRKNAGFTDEERGKF-TDLLGAGFIDTFRYF 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R N GWR+DYF S+SL D+ + I +V GSDH P+ L++
Sbjct: 191 YPDREGIYSWWSYRFSARAKNAGWRIDYFCASESLKDRLVSADIHTEVMGSDHCPVELVI 250
Query: 181 K 181
+
Sbjct: 251 E 251
>gi|295101467|emb|CBK99012.1| exodeoxyribonuclease III [Faecalibacterium prausnitzii L2-6]
Length = 250
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 124/180 (68%), Gaps = 2/180 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PLSVT G+GI +HD EGR++T E+ +L++CY PNS DGL+RL YR+T W+ + +Y+
Sbjct: 73 PLSVTTGIGIEEHDHEGRVLTLEYPESYLVNCYTPNSQDGLKRLDYRMT-WEDAFRAYLL 131
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
EL+ KKPVIL GDLN AHQEIDI N NR SAGFTD+ER L+ GF D+FRA H
Sbjct: 132 ELDAKKPVILCGDLNVAHQEIDIKNAKTNRMSAGFTDQERAKM-TELLAVGFTDSFRAIH 190
Query: 123 RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
V Y++W YR R+ N GWR+DYF+VS +ADK + I +V GSDH P+ L + L
Sbjct: 191 PDEVKYSWWSYRFHAREKNAGWRIDYFIVSNRIADKIKAAEIHNEVFGSDHCPVELDIDL 250
>gi|260887970|ref|ZP_05899233.1| exodeoxyribonuclease III [Selenomonas sputigena ATCC 35185]
gi|330838548|ref|YP_004413128.1| exodeoxyribonuclease III [Selenomonas sputigena ATCC 35185]
gi|260862221|gb|EEX76721.1| exodeoxyribonuclease III [Selenomonas sputigena ATCC 35185]
gi|329746312|gb|AEB99668.1| exodeoxyribonuclease III [Selenomonas sputigena ATCC 35185]
Length = 250
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 125/181 (69%), Gaps = 3/181 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I+PLSV+YGLGI +HD EGR++ EFD + ++ Y PNS GL RL+YR+T W+ + Y
Sbjct: 71 IEPLSVSYGLGIEEHDHEGRVIALEFDDLYFVTVYTPNSQRGLERLAYRMT-WEEAFRDY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ L+ KKPV++ GDLN AH EID+ NP NR++AGFTDEER+ L+ GF DTFRA
Sbjct: 130 LLALDAKKPVVVCGDLNVAHTEIDLKNPKTNRKNAGFTDEEREKM-TELLAAGFTDTFRA 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G YT+W Y R+TN GWR+DYFLVS LA K ++ I +V GSDH P+GL+
Sbjct: 189 LYPDKTGIYTWWSYLRKARETNAGWRIDYFLVSDRLAPKIKEATIHNEVFGSDHCPVGLV 248
Query: 180 L 180
L
Sbjct: 249 L 249
>gi|269798609|ref|YP_003312509.1| exodeoxyribonuclease III Xth [Veillonella parvula DSM 2008]
gi|282849823|ref|ZP_06259207.1| exodeoxyribonuclease III [Veillonella parvula ATCC 17745]
gi|294792738|ref|ZP_06757885.1| exodeoxyribonuclease III [Veillonella sp. 6_1_27]
gi|269095238|gb|ACZ25229.1| exodeoxyribonuclease III Xth [Veillonella parvula DSM 2008]
gi|282580760|gb|EFB86159.1| exodeoxyribonuclease III [Veillonella parvula ATCC 17745]
gi|294456637|gb|EFG25000.1| exodeoxyribonuclease III [Veillonella sp. 6_1_27]
Length = 251
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 94/183 (51%), Positives = 126/183 (68%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPLSVT G+GI +HD EGR++TAE+D+F+L+ CY PNS L RL YR+T W+ + +Y
Sbjct: 71 IKPLSVTNGIGIEEHDQEGRVITAEYDNFYLVCCYTPNSQRELARLDYRMT-WEDAFRNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ EL+KKKPVIL GDLN AHQEID+ NP NR++AGF+DEER L GF DTFR
Sbjct: 130 LLELDKKKPVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAKM-TELLGAGFTDTFRH 188
Query: 121 QH-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + Y++W Y R+ N GWR+DYF+ S+ L DK ++ I + GSDH P+ L+
Sbjct: 189 LYPDAIEQYSWWSYMGKARERNTGWRIDYFITSKRLDDKIQEAKIHQQIFGSDHCPVELV 248
Query: 180 LKL 182
+ L
Sbjct: 249 IDL 251
>gi|254479049|ref|ZP_05092404.1| exodeoxyribonuclease III [Carboxydibrachium pacificum DSM 12653]
gi|214035005|gb|EEB75724.1| exodeoxyribonuclease III [Carboxydibrachium pacificum DSM 12653]
Length = 258
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/181 (54%), Positives = 125/181 (69%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSV+YG+G HD EGR++T E++ FFL++ Y PNS GL RL YR+ +W+ SY+
Sbjct: 75 KPLSVSYGIGTPHHDKEGRVITLEYEKFFLVNTYTPNSQRGLTRLDYRM-QWEEDFRSYL 133
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+ KPVIL GDLN AHQEIDI NPA NRR+AGFTDEER+ L+ GF+DTFR
Sbjct: 134 LKLDSLKPVILCGDLNVAHQEIDIKNPAANRRNAGFTDEEREKMTI-LLNSGFIDTFRYF 192
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y H R+ N GWR+DYF+VS+ L D DS I +V GSDH P+ LI+
Sbjct: 193 YPDKKDAYTWWSYMHNAREKNIGWRVDYFIVSERLKDYLIDSQIHSEVMGSDHCPVVLIV 252
Query: 181 K 181
K
Sbjct: 253 K 253
>gi|288799645|ref|ZP_06405104.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 299 str. F0039]
gi|288332893|gb|EFC71372.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 299 str. F0039]
Length = 250
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 122/178 (68%), Gaps = 2/178 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PLSV YG+GI HD EGR+VT EF+ F+L++ Y PNS D L+RL YR+ EW+ +Y+
Sbjct: 73 PLSVQYGIGIDQHDHEGRVVTLEFEQFYLVTVYTPNSQDELKRLDYRM-EWERDFQAYLV 131
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
+L+ KPV++ GD+N AHQEID+ NP NRR+AGFTDEER+ N L GF+DTFR +
Sbjct: 132 KLDASKPVVVCGDMNVAHQEIDLKNPKTNRRNAGFTDEEREKM-TNLLDNGFIDTFRYLY 190
Query: 123 RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
V Y++W YR R+ N GWR+DYFL+S+ L D+ I D+ GSDH P+ L L
Sbjct: 191 PEEVTYSWWSYRFKAREKNTGWRIDYFLISERLKSNLTDAKIHTDIFGSDHCPVELDL 248
>gi|404483949|ref|ZP_11019164.1| exodeoxyribonuclease III (xth) [Clostridiales bacterium OBRC5-5]
gi|404342961|gb|EJZ69330.1| exodeoxyribonuclease III (xth) [Clostridiales bacterium OBRC5-5]
Length = 276
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 128/182 (70%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VTYG+GI +HD+EGR++TAE++ F+L++CY PNS GL RL YR+T W+ + SY+
Sbjct: 97 KPLNVTYGIGIEEHDNEGRVITAEYEDFYLITCYTPNSQRGLTRLDYRMT-WEDAFLSYI 155
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+LE+KKPVI GDLN AH+EID+ NP NR++AGFTDEER L+ GF D+FR
Sbjct: 156 LKLEEKKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKMDV-ILTSGFCDSFRVL 214
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W Y G R N GWR+DYF+VS L D+ ++ I D+ GSDH P+ L +
Sbjct: 215 YPDKTDAYSWWSYMGGARAKNVGWRIDYFIVSDKLKDRIKEAKIHSDILGSDHCPVELDI 274
Query: 181 KL 182
++
Sbjct: 275 EI 276
>gi|373471031|ref|ZP_09562109.1| exodeoxyribonuclease III [Lachnospiraceae bacterium oral taxon 082
str. F0431]
gi|371761191|gb|EHO49827.1| exodeoxyribonuclease III [Lachnospiraceae bacterium oral taxon 082
str. F0431]
Length = 259
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 126/182 (69%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VTYG+GI +HD+EGR++TAE++ F++++CY PNS GL RL YR+T W+ + Y+
Sbjct: 80 KPLNVTYGIGIEEHDNEGRVITAEYEDFYMITCYTPNSQRGLTRLEYRMT-WEDAFLKYI 138
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
ELEK KPVI GDLN AH EID+ NP NR++AGFTDEER LS GFVD+FR
Sbjct: 139 LELEKNKPVIFCGDLNVAHTEIDLKNPKTNRKNAGFTDEERAKMDV-ILSSGFVDSFRVL 197
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W Y G R N GWR+DYF+VS L D+ ++ I ++ GSDH P+ L +
Sbjct: 198 YPDKTDAYSWWSYMGGARAKNVGWRIDYFIVSAKLKDRIKEAKIHSEIFGSDHCPVELDI 257
Query: 181 KL 182
++
Sbjct: 258 EI 259
>gi|423385244|ref|ZP_17362500.1| exodeoxyribonuclease [Bacillus cereus BAG1X1-2]
gi|423528399|ref|ZP_17504844.1| exodeoxyribonuclease [Bacillus cereus HuB1-1]
gi|401635300|gb|EJS53055.1| exodeoxyribonuclease [Bacillus cereus BAG1X1-2]
gi|402452062|gb|EJV83881.1| exodeoxyribonuclease [Bacillus cereus HuB1-1]
Length = 252
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 126/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGRL+T EF+ F++++ Y PNS GL RL YR+ +W+ SY+
Sbjct: 73 EPLSVTYGLGIEEHDQEGRLITLEFEDFYMITLYTPNSKRGLERLDYRM-KWEDDFRSYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+EID+ NP NR++ GF+DEER+ F L +GFVDT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFSC-ILEEGFVDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + D+ ++ I +V GSDH P+ L
Sbjct: 191 YPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEVMGSDHCPVEL 248
>gi|376263099|ref|YP_005149819.1| exodeoxyribonuclease III [Clostridium sp. BNL1100]
gi|373947093|gb|AEY68014.1| exodeoxyribonuclease III [Clostridium sp. BNL1100]
Length = 253
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 92/183 (50%), Positives = 127/183 (69%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP+S + G+GI +HD+EGR++T EF+ +FL++ Y PNS L RL YR+ +W+ Y
Sbjct: 72 IKPVSSSCGIGIEEHDNEGRVITLEFEEYFLVNVYTPNSKRELERLEYRM-KWEDDFRVY 130
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K+LE+ KPVI+ GD+N AHQEIDI NP N+RSAGFT EER+ F + L +GFVDTFR
Sbjct: 131 LKQLEQTKPVIICGDMNVAHQEIDIKNPRSNKRSAGFTMEEREKF-SELLEQGFVDTFRT 189
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G YT+W Y R+ N GWR+DYF +S++L D+ + I D+ GSDH P+GL
Sbjct: 190 LYPDKTGAYTWWSYMFKAREKNVGWRIDYFCISEALKDRIEAAEIYCDIMGSDHCPVGLT 249
Query: 180 LKL 182
+K
Sbjct: 250 IKC 252
>gi|403366756|gb|EJY83183.1| Exodeoxyribonuclease III family protein [Oxytricha trifallax]
Length = 620
Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats.
Identities = 95/181 (52%), Positives = 124/181 (68%), Gaps = 2/181 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP+SV+Y +G+ HD EGR +T EF+ FFL+ YVPNSG L+ YR +EWD +Y
Sbjct: 314 IKPISVSYDIGVHKHDKEGRTITLEFEKFFLVGVYVPNSGATLKWHDYRCSEWDLDFRAY 373
Query: 61 VKELEKK-KPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFR 119
+K LE++ KPVIL GD+N AHQEIDI++P N R A FT+EERQSF +NF GFVDTFR
Sbjct: 374 LKGLERRGKPVILCGDMNVAHQEIDIFDPKRNERMACFTNEERQSF-SNFTKMGFVDTFR 432
Query: 120 AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G + Y++W R RK N+GWRLDYF+VS+ + D+ I + GSDH P+ L
Sbjct: 433 ELYPGKIKYSFWDIRDKSRKENKGWRLDYFMVSRQIKHALTDAEIHNEFWGSDHCPVSLT 492
Query: 180 L 180
L
Sbjct: 493 L 493
>gi|320529778|ref|ZP_08030856.1| exodeoxyribonuclease III [Selenomonas artemidis F0399]
gi|320138017|gb|EFW29921.1| exodeoxyribonuclease III [Selenomonas artemidis F0399]
Length = 250
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 124/181 (68%), Gaps = 3/181 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLSV G+GI HD+EGR++T EFD +L++ Y PNS + L RL YR+ W+ + S+
Sbjct: 71 VKPLSVARGIGIPQHDNEGRVITMEFDDLYLVTVYTPNSQNALARLDYRMA-WEDAFRSF 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ EL KKPV++ GDLN AH EID+ NP NRR+AGFTDEER FG L+ GFVDTFRA
Sbjct: 130 LLELRSKKPVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGKFG-ELLAAGFVDTFRA 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ VG YT+W Y R+TN GWR+DYFLVS+ L + + I DV GSDH P+ L
Sbjct: 189 LYPDKVGAYTWWSYLRHARETNAGWRIDYFLVSEELRGRIAAAEIHADVFGSDHCPVSLT 248
Query: 180 L 180
L
Sbjct: 249 L 249
>gi|228940815|ref|ZP_04103375.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228973735|ref|ZP_04134313.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228980291|ref|ZP_04140602.1| Exodeoxyribonuclease [Bacillus thuringiensis Bt407]
gi|384187741|ref|YP_005573637.1| exodeoxyribonuclease III [Bacillus thuringiensis serovar chinensis
CT-43]
gi|410676060|ref|YP_006928431.1| exodeoxyribonuclease ExoA [Bacillus thuringiensis Bt407]
gi|452200118|ref|YP_007480199.1| Exodeoxyribonuclease III [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228779396|gb|EEM27652.1| Exodeoxyribonuclease [Bacillus thuringiensis Bt407]
gi|228785981|gb|EEM33982.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228818829|gb|EEM64894.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326941450|gb|AEA17346.1| exodeoxyribonuclease III [Bacillus thuringiensis serovar chinensis
CT-43]
gi|409175189|gb|AFV19494.1| exodeoxyribonuclease ExoA [Bacillus thuringiensis Bt407]
gi|452105511|gb|AGG02451.1| Exodeoxyribonuclease III [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 252
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 126/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGRL+T EF+ F++++ Y PNS GL RL YR+ +W+ SY+
Sbjct: 73 EPLSVTYGLGIEEHDQEGRLITLEFEDFYMITLYTPNSKRGLERLDYRM-KWEDDFRSYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+EID+ NP NR++ GF+DEER+ F L +GFVDT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTC-ILEEGFVDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + D+ ++ I +V GSDH P+ L
Sbjct: 191 YPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEVMGSDHCPVEL 248
>gi|228959948|ref|ZP_04121613.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|423628823|ref|ZP_17604572.1| exodeoxyribonuclease [Bacillus cereus VD154]
gi|228799691|gb|EEM46643.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|401268368|gb|EJR74416.1| exodeoxyribonuclease [Bacillus cereus VD154]
Length = 252
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 126/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGRL+T EF+ F++++ Y PNS GL RL YR+ +W+ SY+
Sbjct: 73 EPLSVTYGLGIEEHDQEGRLITLEFEDFYMITLYTPNSKRGLERLDYRM-KWEDDFRSYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+EID+ NP NR++ GF+DEER+ F L +GF+DT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFSC-ILEEGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + D+ ++ I +V GSDH P+ L
Sbjct: 191 YPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEVMGSDHCPVEL 248
>gi|294794491|ref|ZP_06759627.1| exodeoxyribonuclease III [Veillonella sp. 3_1_44]
gi|294454821|gb|EFG23194.1| exodeoxyribonuclease III [Veillonella sp. 3_1_44]
Length = 251
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 94/183 (51%), Positives = 126/183 (68%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPLSVT G+GI +HD EGR++TAE+D+F+L+ CY PNS L RL YR+T W+ + +Y
Sbjct: 71 IKPLSVTNGIGIEEHDQEGRVITAEYDNFYLVCCYTPNSQRELARLDYRMT-WEDAFRNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ EL+KKKPVIL GDLN AHQEID+ NP NR++AGF+DEER L GF DTFR
Sbjct: 130 LLELDKKKPVILCGDLNVAHQEIDLKNPKMNRKNAGFSDEERAKM-TELLGAGFTDTFRH 188
Query: 121 QH-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + Y++W Y R+ N GWR+DYF+ S+ L DK ++ I + GSDH P+ L+
Sbjct: 189 LYPDAIEQYSWWSYMGKARERNTGWRIDYFITSKRLDDKIQEAKIHQQIFGSDHCPVELV 248
Query: 180 LKL 182
+ L
Sbjct: 249 IDL 251
>gi|258648040|ref|ZP_05735509.1| exodeoxyribonuclease III [Prevotella tannerae ATCC 51259]
gi|260851895|gb|EEX71764.1| exodeoxyribonuclease III [Prevotella tannerae ATCC 51259]
Length = 250
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 125/181 (69%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSV GLGI +HD EGR++T E D F+L+ Y PNS D LRRL YR+ W+ + +++
Sbjct: 72 KPLSVQIGLGIDEHDHEGRVITLELDDFYLVCVYTPNSQDELRRLDYRMI-WEEAFQAHL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+ KPVI+ GD+N AHQEID+ NP NRR+AGFTDEER+ LS GF+DTFR
Sbjct: 131 HKLDAHKPVIVCGDMNVAHQEIDLKNPKTNRRNAGFTDEEREKM-TQLLSNGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
H + G Y++W YR R+ N GWR+DYFLVS+ L + ++ I D+ GSDH P+ LIL
Sbjct: 190 HPDLTGAYSWWSYRFRAREKNTGWRIDYFLVSERLKPRLVEANIHNDIMGSDHCPVELIL 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|431795205|ref|YP_007222110.1| exodeoxyribonuclease III [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430785431|gb|AGA70714.1| exodeoxyribonuclease III [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 250
Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 121/178 (67%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL VTYG+G +HD EGR++T EF+ F+L++ Y PNS GL RL YR+T W+ S++
Sbjct: 72 EPLKVTYGIGKEEHDQEGRVITLEFEGFYLVTVYTPNSQRGLARLEYRMT-WEEEFLSFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE+ KPVI GDLN AH EID+ NP NR++AGF+DEER FG L KGF+DTFR
Sbjct: 131 KNLEQAKPVIFCGDLNMAHTEIDLKNPKTNRKNAGFSDEERAKFG-ELLKKGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ YT+W Y R N GWR+DYF VS+SL D+ D+ I ++ GSDH P+GL
Sbjct: 190 YPDKTEAYTWWSYMFNARANNAGWRIDYFCVSESLKDQLRDAVIYSEILGSDHCPVGL 247
>gi|150017217|ref|YP_001309471.1| exodeoxyribonuclease III Xth [Clostridium beijerinckii NCIMB 8052]
gi|149903682|gb|ABR34515.1| exodeoxyribonuclease III Xth [Clostridium beijerinckii NCIMB 8052]
Length = 254
Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 126/182 (69%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V G+GI +HD+EGR++T E+ +F+L++ Y PNS GL RL YR+ W+ Y+
Sbjct: 75 EPLTVKRGIGIEEHDNEGRVLTLEYGNFYLVNVYTPNSKQGLERLDYRMV-WEDVFRKYL 133
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
KELEK KPVI+ GDLN AH+EID+ NP NR++AGFTDEER + L GF+DT+R
Sbjct: 134 KELEKNKPVIICGDLNVAHKEIDLKNPTSNRKNAGFTDEERSKI-SELLEAGFIDTYRYF 192
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R N GWR+DYFLVS+SL DK D+ I +VTGSDH P+ L +
Sbjct: 193 YPDKEGMYSWWSYRFNARANNAGWRIDYFLVSESLKDKLEDAKIHMEVTGSDHCPVELTI 252
Query: 181 KL 182
L
Sbjct: 253 NL 254
>gi|402312986|ref|ZP_10831909.1| exodeoxyribonuclease III [Lachnospiraceae bacterium ICM7]
gi|400367562|gb|EJP20578.1| exodeoxyribonuclease III [Lachnospiraceae bacterium ICM7]
Length = 258
Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 128/182 (70%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VTYG+GI +HD+EGR++TAE++ F+L++CY PNS GL RL YR+T W+ + SY+
Sbjct: 79 KPLNVTYGIGIEEHDNEGRVITAEYEDFYLITCYTPNSQRGLTRLDYRMT-WEDAFLSYI 137
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+LE+KKPVI GDLN AH+EID+ NP NR++AGFTDEER L+ GF D+FR
Sbjct: 138 LKLEEKKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKMDV-ILTSGFCDSFRVL 196
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W Y G R N GWR+DYF+VS L D+ ++ I D+ GSDH P+ L +
Sbjct: 197 YPDKTDAYSWWSYMGGARAKNVGWRIDYFIVSDKLKDRIKEAKIHSDILGSDHCPVELDI 256
Query: 181 KL 182
++
Sbjct: 257 EI 258
>gi|331092367|ref|ZP_08341193.1| exodeoxyribonuclease [Lachnospiraceae bacterium 2_1_46FAA]
gi|330401391|gb|EGG80977.1| exodeoxyribonuclease [Lachnospiraceae bacterium 2_1_46FAA]
Length = 250
Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 96/181 (53%), Positives = 127/181 (70%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYG+GI +HD EGRL+T EF F+ + Y PNS + L RL YR+ +W+ +Y+
Sbjct: 72 EPLSVTYGMGIEEHDKEGRLITLEFPEFYFATVYTPNSQNELARLDYRM-QWETDFLAYM 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE+KKPVI GDLN AH+EID+ NP NR++AGFTDEER FG L GF+DTFR
Sbjct: 131 KKLEEKKPVIFCGDLNVAHREIDLKNPKTNRKNAGFTDEERGKFG-ELLDAGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR R+ N GWR+DYF VS+SL ++ D+ IL + GSDH P+ L L
Sbjct: 190 YPDMEGIYSWWSYRFRAREKNAGWRIDYFCVSESLRERLADAKILTYIFGSDHCPVELDL 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|160936797|ref|ZP_02084163.1| hypothetical protein CLOBOL_01687 [Clostridium bolteae ATCC
BAA-613]
gi|158440289|gb|EDP18035.1| hypothetical protein CLOBOL_01687 [Clostridium bolteae ATCC
BAA-613]
Length = 251
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 131/181 (72%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV+YG+G+ +HD+EGR++TAEF +++++CY PNS DGL RL YR+ +W+ +Y+
Sbjct: 73 EPVSVSYGIGMEEHDTEGRVITAEFPEYYVVTCYTPNSQDGLARLDYRM-KWEDDFLAYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE+ KPV+ GDLN AH+EID+ NP NR++AGFTDEER F + L+ GFVDTFR
Sbjct: 132 KKLEENKPVVFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKF-TDLLAAGFVDTFRYF 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR R N GWR+DYF VS+SL D+ + I V GSDH P+ L++
Sbjct: 191 YPDLEGTYSWWSYRFSARAKNAGWRIDYFCVSESLKDRLVSASIHNTVMGSDHCPVELVI 250
Query: 181 K 181
+
Sbjct: 251 E 251
>gi|145529087|ref|XP_001450332.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417943|emb|CAK82935.1| unnamed protein product [Paramecium tetraurelia]
Length = 348
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 123/182 (67%), Gaps = 1/182 (0%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLSV +G+ HD EGR +TAEF+ F+L+SCYVPNSG L RL YR EWD +Y
Sbjct: 165 VKPLSVKCDIGVDKHDQEGRTLTAEFEQFYLVSCYVPNSGQKLERLDYRTKEWDIDFQNY 224
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++ L KKKP IL GDLN AH EID+ NPAGN+++AGFT +ER F +N+L KG+VD+FR
Sbjct: 225 LEGLRKKKPTILCGDLNVAHHEIDLSNPAGNKKTAGFTLQERDQF-SNYLQKGWVDSFRH 283
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
H V Y+++ R R N+GWRLDYF++++ +D S I V GSDH PI +
Sbjct: 284 LHPKEVKYSFFSARSNSRSQNKGWRLDYFIINKEASDAITVSDINLTVEGSDHVPIECEV 343
Query: 181 KL 182
L
Sbjct: 344 DL 345
>gi|325660677|ref|ZP_08149307.1| exodeoxyribonuclease [Lachnospiraceae bacterium 4_1_37FAA]
gi|325473038|gb|EGC76246.1| exodeoxyribonuclease [Lachnospiraceae bacterium 4_1_37FAA]
Length = 250
Score = 198 bits (503), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 123/180 (68%), Gaps = 7/180 (3%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YG+G+ +HD EGR++T EF+ F+ ++ Y PNS + L RL YR+ +W+ Y+
Sbjct: 72 EPLSVAYGIGMEEHDKEGRVITLEFEEFYFVTVYTPNSQNELARLDYRM-QWETEFLKYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFR-- 119
K+LE KKPVI GDLN AH+EID+ NP NR++AGFTDEER F LS GF+DTFR
Sbjct: 131 KKLEAKKPVIFCGDLNVAHREIDLKNPKTNRKNAGFTDEERGKF-TELLSAGFIDTFRYF 189
Query: 120 -AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G+ Y++W YR R N GWR+DYF VS+ L D+ D+ IL DV GSDH P+ L
Sbjct: 190 YPEQEGI--YSWWSYRFSARAKNAGWRIDYFCVSECLKDRLRDAKILTDVMGSDHCPVEL 247
>gi|402835045|ref|ZP_10883630.1| exodeoxyribonuclease III [Selenomonas sp. CM52]
gi|402276400|gb|EJU25510.1| exodeoxyribonuclease III [Selenomonas sp. CM52]
Length = 250
Score = 198 bits (503), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 124/181 (68%), Gaps = 3/181 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I+PLSV+YGLGI +HD EGR++ EFD + ++ Y PNS GL RL+YR+T W+ + Y
Sbjct: 71 IEPLSVSYGLGIEEHDHEGRVIALEFDDLYFVTVYTPNSQRGLERLAYRMT-WEEAFRDY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ L+ KKPV++ GDLN AH EID+ NP NR++AGFTDEER+ L GF DTFRA
Sbjct: 130 LLTLDAKKPVVVCGDLNVAHTEIDLKNPKTNRKNAGFTDEEREKM-TELLQAGFTDTFRA 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G YT+W Y R+TN GWR+DYFLVS LA K ++ I +V GSDH P+GL+
Sbjct: 189 LYPDKTGIYTWWSYLRKARETNAGWRIDYFLVSDRLAPKIKEATIHNEVFGSDHCPVGLV 248
Query: 180 L 180
L
Sbjct: 249 L 249
>gi|333984917|ref|YP_004514127.1| exodeoxyribonuclease III [Methylomonas methanica MC09]
gi|333808958|gb|AEG01628.1| exodeoxyribonuclease III Xth [Methylomonas methanica MC09]
Length = 254
Score = 198 bits (503), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 123/177 (69%), Gaps = 3/177 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V + +GI++HD EGR++ AEF+SF+LL+ YVPNSGDGL RL YR T WD +L +Y++
Sbjct: 76 PLRVVHDMGIAEHDQEGRVLVAEFESFYLLNVYVPNSGDGLARLDYRQT-WDAALLAYLQ 134
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGN-RRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+ +KPVI GD N AHQ IDI P N +SAG+T E F + F GF+D+FR
Sbjct: 135 QLQNQKPVIACGDFNVAHQAIDIARPKANYNKSAGYTQTEIDGF-SRFTEAGFIDSFRHF 193
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
H V Y++W YR G R N GWR+DY L SQ+L + DS+ILP++ GSDH P+G+
Sbjct: 194 HPETVAYSWWSYRAGARAKNIGWRIDYVLTSQALLPRIQDSFILPEIMGSDHCPVGI 250
>gi|334127299|ref|ZP_08501227.1| exodeoxyribonuclease III [Centipeda periodontii DSM 2778]
gi|333389799|gb|EGK60957.1| exodeoxyribonuclease III [Centipeda periodontii DSM 2778]
Length = 255
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLSV YGLGI +HD EGR++T EF+ +L++ Y PNS + L RL YR+ W+ + ++
Sbjct: 76 VKPLSVAYGLGIEEHDHEGRVITMEFEDIYLVTVYTPNSKNALARLDYRLV-WEDAFRAF 134
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ +L KKPV++ GDLN AH EID+ NP NRR+AGFTDEER L GF+DTFRA
Sbjct: 135 LLDLRAKKPVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGKL-TELLGAGFIDTFRA 193
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + G YT+W Y R+TN GWR+DYFLVS+ L D+ + I DV GSDH P+ L
Sbjct: 194 LYPDLTGAYTWWSYLRHARETNAGWRIDYFLVSEELRDRIAAAEIHADVFGSDHCPVSLT 253
Query: 180 LK 181
LK
Sbjct: 254 LK 255
>gi|365843219|ref|ZP_09384168.1| exodeoxyribonuclease III [Flavonifractor plautii ATCC 29863]
gi|364573045|gb|EHM50567.1| exodeoxyribonuclease III [Flavonifractor plautii ATCC 29863]
Length = 250
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 125/181 (69%), Gaps = 3/181 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++PLSVT G+G+ HD EGR++TAEFD FFL+ CY PN+ + L R+ YR+ +W+ +Y
Sbjct: 71 VEPLSVTCGIGLDAHDHEGRVITAEFDGFFLVCCYTPNAQNELARIDYRM-QWEDDFRAY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ EL+KKKPV+L GDLN AH+EID+ NP NR +AGF+D+ER LS GF DTFRA
Sbjct: 130 LMELDKKKPVVLCGDLNVAHEEIDLKNPRSNRGNAGFSDQERGKM-TELLSSGFTDTFRA 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G YT+W YR RK N GWR+DYF+VS L + D+ I +V GSDH P+ L+
Sbjct: 189 LYPDRTGAYTWWSYRFNARKNNAGWRIDYFIVSDRLLPRVRDNIIHAEVEGSDHCPVELV 248
Query: 180 L 180
L
Sbjct: 249 L 249
>gi|422344654|ref|ZP_16425579.1| exodeoxyribonuclease [Selenomonas noxia F0398]
gi|355376723|gb|EHG23965.1| exodeoxyribonuclease [Selenomonas noxia F0398]
Length = 250
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 125/182 (68%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLSV+YG+GI +HD+EGR++T E +L++ Y PN+ L RL YR+ W+ S ++
Sbjct: 71 VKPLSVSYGIGIEEHDNEGRVITMELPDVYLVTVYTPNAKRALERLDYRMA-WEDSFRAF 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ +L KKPV++ GDLN AH EID+ NP NRR+AGFTDEER FG L+ GFVDTFRA
Sbjct: 130 LLDLRAKKPVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGKFG-ELLAAGFVDTFRA 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G YT+W Y R+TN GWR+DYFLVS+ L D+ + I DV GSDH P+ L
Sbjct: 189 LYPDKTGAYTWWSYLRHARETNAGWRIDYFLVSEELRDRISAAEIHADVFGSDHCPVSLT 248
Query: 180 LK 181
LK
Sbjct: 249 LK 250
>gi|313895351|ref|ZP_07828908.1| exodeoxyribonuclease III [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312976246|gb|EFR41704.1| exodeoxyribonuclease III [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 250
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/181 (53%), Positives = 124/181 (68%), Gaps = 3/181 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLSV G+GI HD+EGR++T EFD +L++ Y PNS + L RL YR+ W+ + ++
Sbjct: 71 VKPLSVARGIGIPQHDNEGRVITMEFDDLYLVTVYTPNSQNALARLDYRMA-WEDAFRAF 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ EL KKPV++ GDLN AH EID+ NP NRR+AGFTDEER FG L+ GFVDTFRA
Sbjct: 130 LLELRSKKPVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGKFG-ELLAAGFVDTFRA 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ VG YT+W Y R+TN GWR+DYFLVS+ L + + I DV GSDH P+ L
Sbjct: 189 LYPDKVGAYTWWSYLRHARETNAGWRIDYFLVSEELRGRIAAAEIHADVFGSDHCPVSLT 248
Query: 180 L 180
L
Sbjct: 249 L 249
>gi|30021833|ref|NP_833464.1| exodeoxyribonuclease III [Bacillus cereus ATCC 14579]
gi|229129016|ref|ZP_04257989.1| Exodeoxyribonuclease [Bacillus cereus BDRD-Cer4]
gi|29897389|gb|AAP10665.1| Exodeoxyribonuclease III [Bacillus cereus ATCC 14579]
gi|228654253|gb|EEL10118.1| Exodeoxyribonuclease [Bacillus cereus BDRD-Cer4]
Length = 252
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGRL+T EF+ F++++ Y PNS GL RL YR+ +W+ SY+
Sbjct: 73 EPLSVTYGLGIEEHDQEGRLITLEFEDFYMITLYTPNSKRGLERLDYRM-KWEDDFRSYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+EID+ NP NR + GF+DEER+ F L +GF+DT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEIDLKNPKSNRENPGFSDEEREKFSC-ILEEGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + D+ ++ I +V GSDH P+ L
Sbjct: 191 YPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSEGMKDQITEAKINSEVMGSDHCPVEL 248
>gi|167767320|ref|ZP_02439373.1| hypothetical protein CLOSS21_01839 [Clostridium sp. SS2/1]
gi|429761671|ref|ZP_19294088.1| exodeoxyribonuclease III [Anaerostipes hadrus DSM 3319]
gi|167711295|gb|EDS21874.1| exodeoxyribonuclease III [Clostridium sp. SS2/1]
gi|291559374|emb|CBL38174.1| exodeoxyribonuclease III [butyrate-producing bacterium SSC/2]
gi|429183247|gb|EKY24313.1| exodeoxyribonuclease III [Anaerostipes hadrus DSM 3319]
Length = 250
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 125/181 (69%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV YGLGI +HD EGR++T EF ++ ++ Y PNS L RLSYR+ +W+ +Y+
Sbjct: 72 EPISVFYGLGIEEHDQEGRVITLEFKDYYFITVYTPNSQSELARLSYRM-KWEEDFLAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE+KKPVI GDLN A +EID+ NP NR++AGFTDEER+ LS GF+DTFR
Sbjct: 131 KKLEEKKPVIFCGDLNVAVEEIDLKNPKTNRKNAGFTDEEREKM-RTILSNGFIDTFRYL 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS+ L D+ D+ IL DV GSDH PI L
Sbjct: 190 YPDQTGIYSWWSYRFNARKNNAGWRIDYFIVSECLKDRISDAKILTDVMGSDHCPIELDF 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|315652833|ref|ZP_07905807.1| exodeoxyribonuclease III [Lachnoanaerobaculum saburreum DSM 3986]
gi|315485035|gb|EFU75443.1| exodeoxyribonuclease III [Lachnoanaerobaculum saburreum DSM 3986]
Length = 259
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 127/182 (69%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP++VTYG+GI +HD+EGR++TAE+D F+L++CY PNS GL RL YR+T W+ + Y
Sbjct: 80 KPINVTYGIGIDEHDNEGRVITAEYDEFYLITCYTPNSQRGLTRLDYRMT-WEDAFLDYA 138
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+LE+KKPVI GDLN AH+EID+ NP NR++AGFTDEER LS GFVD+FR
Sbjct: 139 LKLEEKKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERAKMDI-ILSSGFVDSFRLL 197
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W Y G R N GWR+DYF+VS L D+ ++ I +V GSDH P+ L +
Sbjct: 198 YPDKTDAYSWWSYMGGARAKNVGWRIDYFIVSAKLKDRIKEAKIHSEVLGSDHCPVELDI 257
Query: 181 KL 182
++
Sbjct: 258 EI 259
>gi|423458084|ref|ZP_17434881.1| exodeoxyribonuclease [Bacillus cereus BAG5X2-1]
gi|401148468|gb|EJQ55961.1| exodeoxyribonuclease [Bacillus cereus BAG5X2-1]
Length = 252
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 127/178 (71%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYGLGI +HD EGR++T EF+ F++++ Y PNS GL RL YR+ +W+ +Y+
Sbjct: 73 EPLAVTYGLGIEEHDQEGRVITLEFEDFYIITLYTPNSKRGLERLDYRM-KWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+L+KKKPV+ GDLN AH+EID+ NP NR++ GF+DEER+ F L +GF+DT+R
Sbjct: 132 KQLDKKKPVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKF-TRILEEGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + DK ++ I +V GSDH P+ L
Sbjct: 191 YPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDKITEAKINSEVMGSDHCPVEL 248
>gi|229111211|ref|ZP_04240765.1| Exodeoxyribonuclease [Bacillus cereus Rock1-15]
gi|229146311|ref|ZP_04274682.1| Exodeoxyribonuclease [Bacillus cereus BDRD-ST24]
gi|296504242|ref|YP_003665942.1| exodeoxyribonuclease III [Bacillus thuringiensis BMB171]
gi|423585849|ref|ZP_17561936.1| exodeoxyribonuclease [Bacillus cereus VD045]
gi|423641177|ref|ZP_17616795.1| exodeoxyribonuclease [Bacillus cereus VD166]
gi|423649605|ref|ZP_17625175.1| exodeoxyribonuclease [Bacillus cereus VD169]
gi|423656600|ref|ZP_17631899.1| exodeoxyribonuclease [Bacillus cereus VD200]
gi|228636944|gb|EEK93403.1| Exodeoxyribonuclease [Bacillus cereus BDRD-ST24]
gi|228672205|gb|EEL27495.1| Exodeoxyribonuclease [Bacillus cereus Rock1-15]
gi|296325294|gb|ADH08222.1| exodeoxyribonuclease III [Bacillus thuringiensis BMB171]
gi|401233195|gb|EJR39691.1| exodeoxyribonuclease [Bacillus cereus VD045]
gi|401280238|gb|EJR86160.1| exodeoxyribonuclease [Bacillus cereus VD166]
gi|401282885|gb|EJR88782.1| exodeoxyribonuclease [Bacillus cereus VD169]
gi|401290341|gb|EJR96035.1| exodeoxyribonuclease [Bacillus cereus VD200]
Length = 252
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGRL+T EF+ F++++ Y PNS GL RL YR+ +W+ SY+
Sbjct: 73 EPLSVTYGLGIEEHDQEGRLITLEFEDFYMITLYTPNSKRGLERLDYRM-KWEDDFRSYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+EID+ NP NR + GF+DEER+ F L +GF+DT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEIDLKNPKSNRENPGFSDEEREKFSC-ILEEGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + D+ ++ I +V GSDH P+ L
Sbjct: 191 YPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEVMGSDHCPVEL 248
>gi|423518373|ref|ZP_17494854.1| exodeoxyribonuclease [Bacillus cereus HuA2-4]
gi|401161100|gb|EJQ68468.1| exodeoxyribonuclease [Bacillus cereus HuA2-4]
Length = 252
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 126/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SVTYGLGI +HD EGR++T EFD F++++ Y PNS GL R+ YR+ EW+ +Y+
Sbjct: 73 EPISVTYGLGIEEHDQEGRVITLEFDDFYMITLYTPNSKRGLERVDYRM-EWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPV+ GDLN AH+EID+ NP NR++ GF+DEER+ F L +GFVDT+R
Sbjct: 132 KRLDEKKPVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKF-TRILEEGFVDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + DK ++ I ++ GSDH P+ L
Sbjct: 191 YPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDKITEAKINSEIMGSDHCPVEL 248
>gi|359412352|ref|ZP_09204817.1| exodeoxyribonuclease III Xth [Clostridium sp. DL-VIII]
gi|357171236|gb|EHI99410.1| exodeoxyribonuclease III Xth [Clostridium sp. DL-VIII]
Length = 252
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 126/182 (69%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV G+GIS+HD+EGR++T EF F+L++ Y PNS GL RL YR+ W+ Y+
Sbjct: 73 EPISVKNGIGISEHDTEGRVITLEFKEFYLVNVYTPNSKQGLERLDYRMV-WEDVFRKYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
KELE+KKPVI+ GDLN AH++ID+ NP NR++AGFTDEER + L GF+DT+R
Sbjct: 132 KELEEKKPVIICGDLNVAHEDIDLKNPKANRKNAGFTDEERNKI-SELLEAGFIDTYRYF 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R N GWR+DYFL S+SL DK D+ I +V GSDH P+ +++
Sbjct: 191 YPNTEGVYSWWSYRFNARGNNAGWRIDYFLASESLKDKLVDAKIHMNVMGSDHCPVEVMV 250
Query: 181 KL 182
L
Sbjct: 251 NL 252
>gi|254445623|ref|ZP_05059099.1| exodeoxyribonuclease III [Verrucomicrobiae bacterium DG1235]
gi|198259931|gb|EDY84239.1| exodeoxyribonuclease III [Verrucomicrobiae bacterium DG1235]
Length = 251
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/179 (51%), Positives = 123/179 (68%), Gaps = 2/179 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P SV+YG+GI HD EGR+VTAE+ FF+++ Y PN+ + LRRL YR EWD +YV
Sbjct: 74 EPESVSYGIGIEKHDGEGRVVTAEYPEFFIVTVYTPNAQNELRRLPYR-QEWDRDFLAYV 132
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KPVI GDLN AH E D+ NP NR++AGFTDEER F + ++ GFVDTFR
Sbjct: 133 KALEATKPVIFCGDLNVAHTEDDLANPKTNRKNAGFTDEERAGFD-DIVAAGFVDTFREF 191
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+G Y++W YR G R N GWR+DYF++S+SL + + ILP+V GSDH P+ ++
Sbjct: 192 TQGKGHYSWWSYRGGARSRNVGWRIDYFMISESLRPQLKSASILPEVLGSDHCPVEMVF 250
>gi|421053769|ref|ZP_15516741.1| exodeoxyribonuclease III Xth [Pelosinus fermentans B4]
gi|421061178|ref|ZP_15523542.1| exodeoxyribonuclease III Xth [Pelosinus fermentans B3]
gi|421066246|ref|ZP_15527876.1| exodeoxyribonuclease III Xth [Pelosinus fermentans A12]
gi|421070869|ref|ZP_15531997.1| exodeoxyribonuclease III Xth [Pelosinus fermentans A11]
gi|392441646|gb|EIW19276.1| exodeoxyribonuclease III Xth [Pelosinus fermentans B4]
gi|392447774|gb|EIW24993.1| exodeoxyribonuclease III Xth [Pelosinus fermentans A11]
gi|392450902|gb|EIW27905.1| exodeoxyribonuclease III Xth [Pelosinus fermentans B3]
gi|392457143|gb|EIW33851.1| exodeoxyribonuclease III Xth [Pelosinus fermentans A12]
Length = 250
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 119/179 (66%), Gaps = 3/179 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I PLSVTYGL I +HD EGR++T EF+ FFL++ Y PNS L RL YR+ W+ +Y
Sbjct: 71 IAPLSVTYGLNIEEHDQEGRIITLEFEDFFLVNVYTPNSKRELLRLDYRM-RWEDEFRTY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ L++ KPVI+ GD+N AHQEIDI NP NRR+AGFTDEER A L GF DTFR
Sbjct: 130 LTALDQSKPVIICGDINVAHQEIDIKNPKTNRRNAGFTDEERDKMTA-LLEAGFTDTFRH 188
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ + YT+W Y R N GWR+DYFLVS +L + ++ I PDV GSDH PIGL
Sbjct: 189 IYPDKIDAYTWWSYMMNARARNIGWRIDYFLVSNALREAIKEATIYPDVMGSDHCPIGL 247
>gi|154484298|ref|ZP_02026746.1| hypothetical protein EUBVEN_02011 [Eubacterium ventriosum ATCC
27560]
gi|149734775|gb|EDM50692.1| exodeoxyribonuclease III [Eubacterium ventriosum ATCC 27560]
Length = 251
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 129/182 (70%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+ V YG+GI +HD EGR++T EF+ F++++CY PNS + L+RL YR+ +W+ +Y+
Sbjct: 72 EPMDVKYGIGIEEHDHEGRVITLEFEDFYMVTCYTPNSQNELKRLDYRM-QWEDDFKAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE+ KPV+L GDLN AH+EID+ NP NR++AGFTDEER+ L GF+DTFR
Sbjct: 131 KKLEESKPVVLCGDLNVAHKEIDLKNPKTNRKNAGFTDEEREKM-TKLLDDGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR R+ N GWR+DYF+VS++L DK + I ++ GSDH PI L L
Sbjct: 190 YPDLEGKYSWWSYRFKAREKNAGWRIDYFIVSEALKDKLEGADIHTEILGSDHCPIELDL 249
Query: 181 KL 182
+
Sbjct: 250 NI 251
>gi|330843681|ref|XP_003293776.1| hypothetical protein DICPUDRAFT_9650 [Dictyostelium purpureum]
gi|325075853|gb|EGC29694.1| hypothetical protein DICPUDRAFT_9650 [Dictyostelium purpureum]
Length = 249
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 126/178 (70%), Gaps = 3/178 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGD-GLRRLSYRITEWDPSLSS 59
+KPLS+ +G+GI+ HD+EGR++TAE+D F+L++ Y+PNSG GL+ L YRI EWD
Sbjct: 73 LKPLSLKFGIGIAKHDTEGRVITAEYDDFYLVNTYIPNSGSRGLKNLDYRIKEWDVDFQK 132
Query: 60 YVKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFR 119
Y+ EL+KKKPV+ GDLN AH EID+ NP N +SAGFT +ER SFG +FL+KGF+D++R
Sbjct: 133 YLVELDKKKPVVWCGDLNVAHTEIDLKNPKTNTKSAGFTIQERTSFG-DFLNKGFIDSYR 191
Query: 120 AQHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPI 176
+ G G +T+W Y G R N GWRLDYF+VS+ D +I V GSDH PI
Sbjct: 192 HYNPGKEGAFTFWTYMGGARAKNVGWRLDYFVVSKRYIDSIKTPFIRSTVMGSDHCPI 249
>gi|229031365|ref|ZP_04187367.1| Exodeoxyribonuclease [Bacillus cereus AH1271]
gi|228729930|gb|EEL80908.1| Exodeoxyribonuclease [Bacillus cereus AH1271]
Length = 252
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 126/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGR++T EF+ F++++ Y PNS GL RL YR+ +W+ +Y+
Sbjct: 73 EPLSVTYGLGIEEHDQEGRVITVEFEGFYMITLYTPNSKRGLERLDYRM-KWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+EID+ NP NR++ GF+DEER+ F L +GF+DT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKF-TRILEEGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + DK ++ I +V GSDH P+ L
Sbjct: 191 YPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDKITEAKINSEVMGSDHCPVEL 248
>gi|34763743|ref|ZP_00144662.1| Exodeoxyribonuclease III [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27886479|gb|EAA23735.1| Exodeoxyribonuclease III [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 253
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 124/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLGI +HD EGR++T EF+ F++++ Y PNS D L RL YR+T W+ Y+
Sbjct: 72 EPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYRMT-WEDEFRKYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEKKKPV++ GDLN AH+EID+ NP NRR+AGFTDEER F L GFVDTFR
Sbjct: 131 KNLEKKKPVVVCGDLNVAHEEIDLKNPKTNRRNAGFTDEERGKF-TELLDSGFVDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR R+ N GWR+DYF+VS+ L D+ I + GSDH P+ LIL
Sbjct: 190 YPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEIHTQIEGSDHCPVVLIL 249
>gi|402303594|ref|ZP_10822685.1| exodeoxyribonuclease III [Selenomonas sp. FOBRC9]
gi|400378209|gb|EJP31070.1| exodeoxyribonuclease III [Selenomonas sp. FOBRC9]
Length = 250
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 124/181 (68%), Gaps = 3/181 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLSV G+GI HD+EGR++T EFD +L++ Y PNS + L RL YR+ W+ + ++
Sbjct: 71 VKPLSVARGIGIPQHDNEGRVITMEFDDLYLVTVYTPNSQNALARLDYRMA-WEDAFRAF 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ EL KKPV++ GDLN AH EID+ NP NRR+AGFTDEER FG L+ GFVDTFRA
Sbjct: 130 LLELRSKKPVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGKFG-ELLAAGFVDTFRA 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ VG YT+W Y R+TN GWR+DYFLVS+ L + + I D+ GSDH P+ L
Sbjct: 189 LYPDKVGAYTWWSYLRHARETNAGWRIDYFLVSEELRGRIAAAEIHADIFGSDHCPVSLT 248
Query: 180 L 180
L
Sbjct: 249 L 249
>gi|423611960|ref|ZP_17587821.1| exodeoxyribonuclease III (xth) [Bacillus cereus VD107]
gi|401246967|gb|EJR53311.1| exodeoxyribonuclease III (xth) [Bacillus cereus VD107]
Length = 252
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV YGLGI +HD EGR++T EFD F++++ Y PNS GL RL YR+ EW+ +Y+
Sbjct: 73 EPISVMYGLGIEEHDQEGRVITLEFDDFYMITLYTPNSKRGLERLDYRM-EWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+EID+ NP NR++ GF+DEER+ F L +GF+DT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTC-VLEEGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF++S+ L K D+ I +VTGSDH P+ L
Sbjct: 191 YPEQEGAYSWWSYRMGARAKNIGWRLDYFVISERLKHKITDAKINSEVTGSDHCPVEL 248
>gi|229174398|ref|ZP_04301930.1| Exodeoxyribonuclease [Bacillus cereus MM3]
gi|228608958|gb|EEK66248.1| Exodeoxyribonuclease [Bacillus cereus MM3]
Length = 252
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 127/178 (71%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGR++T EF+ F++++ Y PNS GL RL YR+ +W+ +Y+
Sbjct: 73 EPLSVTYGLGIEEHDQEGRVITLEFEDFYMITLYTPNSKRGLERLDYRM-KWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+L++KKPV+ GDLN AH+EID+ NP NR++ GF+DEER+ F L +GF+DT+R
Sbjct: 132 KQLDEKKPVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTC-ILEEGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + DK ++ I +V GSDH P+ L
Sbjct: 191 YPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDKITEAKINSEVMGSDHCPVEL 248
>gi|302388430|ref|YP_003824252.1| exodeoxyribonuclease III [Clostridium saccharolyticum WM1]
gi|302199058|gb|ADL06629.1| exodeoxyribonuclease III [Clostridium saccharolyticum WM1]
Length = 251
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 128/182 (70%), Gaps = 7/182 (3%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSV YG+ +HD EGR++ AE+ +++++CY PNS + L RL YR+T W+ ++ +Y+
Sbjct: 73 KPLSVAYGINAEEHDREGRVIAAEYPEYYVVTCYTPNSQNELARLPYRLT-WEDAVLAYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFR-- 119
K+LE+KKPVI GDLN AH+EID+ NP NR++AGFTDEER+ F L GF+DT+R
Sbjct: 132 KKLEEKKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEEREKFTV-LLESGFIDTYRYF 190
Query: 120 -AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G+ Y++W YR RK N GWR+DYF VS+SL D+ + I +V GSDH P+ L
Sbjct: 191 YPEQEGI--YSWWSYRFSARKKNAGWRIDYFCVSESLKDRLASAAIHTEVLGSDHCPVEL 248
Query: 179 IL 180
++
Sbjct: 249 VI 250
>gi|308175792|ref|YP_003922497.1| apurinic/apyrimidinic endonuclease [Bacillus amyloliquefaciens DSM
7]
gi|384161680|ref|YP_005543753.1| apurinic/apyrimidinic endonuclease [Bacillus amyloliquefaciens
TA208]
gi|384166602|ref|YP_005547981.1| apurinic/apyrimidinic endonuclease [Bacillus amyloliquefaciens LL3]
gi|384170793|ref|YP_005552171.1| 5'3'-exonuclease [Bacillus amyloliquefaciens XH7]
gi|307608656|emb|CBI45027.1| apurinic/apyrimidinic endonuclease [Bacillus amyloliquefaciens DSM
7]
gi|328555768|gb|AEB26260.1| apurinic/apyrimidinic endonuclease [Bacillus amyloliquefaciens
TA208]
gi|328914157|gb|AEB65753.1| apurinic/apyrimidinic endonuclease [Bacillus amyloliquefaciens LL3]
gi|341830072|gb|AEK91323.1| 5'3'-exonuclease [Bacillus amyloliquefaciens XH7]
Length = 252
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 127/183 (69%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPL V+YGLGI DHD EGR++T EF++ F+++CY PN+ GL R+ YR+ +W+ Y
Sbjct: 72 VKPLQVSYGLGIDDHDQEGRVITLEFENVFVVNCYTPNAKRGLERIDYRL-QWEADFKDY 130
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+++L++KKPVIL GDLN AH+EID+ NP NR++AGF+D+ER++F L+ GF D+FR
Sbjct: 131 LQKLDQKKPVILCGDLNVAHREIDLKNPKANRKNAGFSDQEREAFSV-LLNAGFTDSFRY 189
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G Y++W YR R+ N GWRLDY +VS L + + I D+ GSDH P+ +
Sbjct: 190 LYPDQEGAYSWWSYRTNAREKNIGWRLDYVIVSDRLKQRITQAAICADIMGSDHCPVEMT 249
Query: 180 LKL 182
L L
Sbjct: 250 LDL 252
>gi|398309083|ref|ZP_10512557.1| exodeoxyribonuclease III [Bacillus mojavensis RO-H-1]
Length = 252
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 129/182 (70%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+V YG+GI +HD EGR++T EF++ ++++ Y PN+ GL R+ YR+ +W+ +L +++
Sbjct: 73 KPLNVMYGIGIEEHDQEGRVITLEFENMYVMTVYTPNAKRGLERIDYRL-QWEEALLAFI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL+KKKPVIL GDLN AHQEID+ NP NR +AGF+D+ER +F FL GF+D+FR
Sbjct: 132 LELDKKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSDQERGAF-TRFLEAGFIDSFRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR G R N GWRLDYF+VS+ L + D+ I V GSDH P+ L +
Sbjct: 191 YPDLEGAYSWWSYRAGARDRNIGWRLDYFVVSERLKGQIEDAKISAQVLGSDHCPVELTI 250
Query: 181 KL 182
+
Sbjct: 251 NI 252
>gi|416999368|ref|ZP_11939959.1| exodeoxyribonuclease III [Veillonella parvula ACS-068-V-Sch12]
gi|333976808|gb|EGL77670.1| exodeoxyribonuclease III [Veillonella parvula ACS-068-V-Sch12]
Length = 251
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/183 (50%), Positives = 125/183 (68%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPLSVT G+GI +HD EGR++TAE+D+F+L+ CY PNS L RL YR+ W+ + +Y
Sbjct: 71 IKPLSVTNGIGIEEHDQEGRVITAEYDNFYLVCCYTPNSQRELARLDYRMN-WEDAFRNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ EL+KKKPVIL GDLN AHQEID+ NP NR++AGF+DEER L GF DTFR
Sbjct: 130 LLELDKKKPVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAKM-TELLGAGFTDTFRH 188
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + Y++W Y R+ N GWR+DYF+ S+ L DK ++ I + GSDH P+ L+
Sbjct: 189 LYPDAIEQYSWWSYMGKARERNTGWRIDYFITSKRLDDKIQEAKIHQQIFGSDHCPVELV 248
Query: 180 LKL 182
+ L
Sbjct: 249 IDL 251
>gi|253826925|ref|ZP_04869810.1| exodeoxyribonuclease LexA [Helicobacter canadensis MIT 98-5491]
gi|313142047|ref|ZP_07804240.1| exodeoxyribonuclease LexA [Helicobacter canadensis MIT 98-5491]
gi|253510331|gb|EES88990.1| exodeoxyribonuclease LexA [Helicobacter canadensis MIT 98-5491]
gi|313131078|gb|EFR48695.1| exodeoxyribonuclease LexA [Helicobacter canadensis MIT 98-5491]
Length = 252
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 122/178 (68%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSV Y +GI+ HD EGR++ AE+ F+L++ Y PNS L RLSYR+ EW+ +Y+
Sbjct: 72 KPLSVAYDMGIAHHDKEGRIICAEYKDFYLVNVYTPNSKRELERLSYRM-EWEDDFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEK KPVI+ GDLN AHQEID+ NP NRR+AGFTDEER+ L GF DTFR
Sbjct: 131 KNLEKTKPVIVCGDLNVAHQEIDLKNPKTNRRNAGFTDEEREKM-TQLLDSGFTDTFRHF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ + G Y++W Y R+ N GWR+DYFL S++L K D+ I P+V GSDH P+GL
Sbjct: 190 YPTLEGAYSWWSYMGKARENNTGWRIDYFLCSKALDSKLLDAKIYPEVFGSDHCPVGL 247
>gi|423469951|ref|ZP_17446695.1| exodeoxyribonuclease [Bacillus cereus BAG6O-2]
gi|423558712|ref|ZP_17535014.1| exodeoxyribonuclease [Bacillus cereus MC67]
gi|401190966|gb|EJQ98002.1| exodeoxyribonuclease [Bacillus cereus MC67]
gi|402437203|gb|EJV69227.1| exodeoxyribonuclease [Bacillus cereus BAG6O-2]
Length = 252
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P++VTYGLGI +HD EGR++T EF+ F++++ Y PNS GL RL YR+ EW+ +Y+
Sbjct: 73 EPIAVTYGLGIEEHDQEGRVITLEFEDFYIITLYTPNSKRGLERLDYRM-EWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+EID+ NP NR++ GF+DEER+ F N L +GFVDT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKF-TNILEEGFVDTYRFL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+ S+ L K D+ I +V GSDH P+ L
Sbjct: 191 YPDQEGAYSWWSYRMGARAKNIGWRLDYFVTSERLKHKITDAKINSEVMGSDHCPVEL 248
>gi|317497391|ref|ZP_07955713.1| exodeoxyribonuclease III [Lachnospiraceae bacterium 5_1_63FAA]
gi|316895311|gb|EFV17471.1| exodeoxyribonuclease III [Lachnospiraceae bacterium 5_1_63FAA]
Length = 250
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 125/181 (69%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV YGLGI +HD EGR++T EF ++ ++ Y PNS L RLSYR+ +W+ +Y+
Sbjct: 72 EPISVFYGLGIEEHDQEGRVITLEFKDYYFITVYTPNSQSELARLSYRM-KWEEDFLAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE+KKPVI GDLN A +EID+ NP NR++AGFTDEER+ L+ GF+DTFR
Sbjct: 131 KKLEEKKPVIFCGDLNVAVEEIDLKNPKTNRKNAGFTDEEREKM-RTILNNGFIDTFRYL 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS+ L D+ D+ IL DV GSDH PI L
Sbjct: 190 YPDQTGIYSWWSYRFNARKNNAGWRIDYFIVSECLKDRISDAKILTDVMGSDHCPIELDF 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|291522762|emb|CBK81055.1| exodeoxyribonuclease III [Coprococcus catus GD/7]
Length = 258
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 129/182 (70%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPLSV YG+ I++HD+EGR++T E+DSF+L++ Y PNS DGL RL YR+ +W+ +Y
Sbjct: 78 IKPLSVRYGMDIAEHDTEGRVITLEYDSFYLVNVYTPNSKDGLARLPYRM-KWEDDFRNY 136
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K LE+ KPV++ GDLN AH+EID+ NP NR++AGF+DEER L+ GF+DTFR
Sbjct: 137 LKTLEQTKPVVMCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKM-TELLAAGFIDTFRY 195
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G Y++W YR RK N GWR+DYF+VS +L ++ + I ++ GSDH P+ L
Sbjct: 196 FYPDKTGEYSWWSYRFNARKNNAGWRIDYFIVSDALKERLISASIHQEIFGSDHCPVELE 255
Query: 180 LK 181
LK
Sbjct: 256 LK 257
>gi|423452962|ref|ZP_17429815.1| exodeoxyribonuclease [Bacillus cereus BAG5X1-1]
gi|401139521|gb|EJQ47083.1| exodeoxyribonuclease [Bacillus cereus BAG5X1-1]
Length = 252
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P++VTYGLGI +HD EGR++T EF+ F++++ Y PNS GL RL YR+ EW+ +Y+
Sbjct: 73 EPIAVTYGLGIEEHDQEGRVITLEFEDFYIITLYTPNSKRGLERLDYRM-EWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+EID+ NP NR++ GF+DEER+ F N L +GFVDT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKF-TNILEEGFVDTYRFL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+ S+ L K D+ I +V GSDH P+ L
Sbjct: 191 YPDQEGAYSWWSYRMGARAKNIGWRLDYFVTSERLKHKITDAKINSEVMGSDHCPVEL 248
>gi|45361461|ref|NP_989307.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Xenopus
(Silurana) tropicalis]
gi|39794455|gb|AAH64266.1| hypothetical protein MGC76280 [Xenopus (Silurana) tropicalis]
gi|51703687|gb|AAH80950.1| hypothetical protein MGC76280 [Xenopus (Silurana) tropicalis]
gi|89267865|emb|CAJ83004.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Xenopus
(Silurana) tropicalis]
Length = 316
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 126/182 (69%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VTYG+GI +HD EGR++TAEFDSFFL++ YVPNS GL RL YR WD +Y+
Sbjct: 137 KPLNVTYGIGIEEHDKEGRVITAEFDSFFLIAAYVPNSSRGLVRLDYR-QRWDVDFRAYL 195
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L+ KKP+IL GDLN AHQEID+ NP N+++ GFT +ERQ FG L++G++D+FR
Sbjct: 196 KGLDSKKPLILCGDLNVAHQEIDLKNPKTNKKTPGFTPQERQGFG-ELLAEGYLDSFREL 254
Query: 122 HR-GVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWRLDYF++S++L DS + + GSDH PI L++
Sbjct: 255 YPDKPSAYTFWTYMMNARAKNVGWRLDYFVLSKALRPALCDSKVRSKIMGSDHCPITLLM 314
Query: 181 KL 182
+
Sbjct: 315 AI 316
>gi|331085596|ref|ZP_08334680.1| exodeoxyribonuclease [Lachnospiraceae bacterium 9_1_43BFAA]
gi|330407483|gb|EGG86985.1| exodeoxyribonuclease [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 250
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 123/180 (68%), Gaps = 7/180 (3%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YG+G+ +HD EGR++T EF+ F+ ++ Y PNS + L RL YR+ +W+ Y+
Sbjct: 72 EPLSVAYGIGMEEHDKEGRVITLEFEEFYFVTVYTPNSQNELARLDYRM-QWETEFLKYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFR-- 119
K+LE KKPVI GDLN AH+EID+ NP N+++AGFTDEER F LS GF+DTFR
Sbjct: 131 KKLEAKKPVIFCGDLNVAHREIDLKNPKTNQKNAGFTDEERGKF-TELLSAGFIDTFRYF 189
Query: 120 -AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G+ Y++W YR R N GWR+DYF VS+ L D+ D+ IL DV GSDH P+ L
Sbjct: 190 YPEQEGI--YSWWSYRFSARAKNAGWRIDYFCVSECLKDRLRDAKILTDVMGSDHCPVEL 247
>gi|289450732|ref|YP_003475042.1| exodeoxyribonuclease III [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289185279|gb|ADC91704.1| exodeoxyribonuclease III [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 251
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I+PL VTYG+ + DHD EGRL+TAEF ++L + Y PNS DGL+RL YR W+ +Y
Sbjct: 72 IEPLRVTYGMNMPDHDQEGRLITAEFPDYYLCTVYTPNSQDGLKRLVYR-QSWERDFLTY 130
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++EL + KPVI+ GDLN AH+EID+ NPA NR++ GFTDEER F L GFVDTFR
Sbjct: 131 LQELRRVKPVIICGDLNVAHREIDLKNPAANRKNPGFTDEERAEF-QTLLDAGFVDTFRY 189
Query: 121 QH-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ Y++W YR R N GWR+DYFLVS L D+ + I ++ GSDH P+ LI
Sbjct: 190 FYPEKPEEYSWWSYRFNARSRNAGWRIDYFLVSNELTDRLQSASIHQEIFGSDHCPVELI 249
Query: 180 LK 181
LK
Sbjct: 250 LK 251
>gi|423367719|ref|ZP_17345151.1| exodeoxyribonuclease [Bacillus cereus VD142]
gi|401083372|gb|EJP91630.1| exodeoxyribonuclease [Bacillus cereus VD142]
Length = 252
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SVTYGLGI +HD EGR++T EFD F++++ Y PNS GL RL YR+ EW+ +Y+
Sbjct: 73 EPISVTYGLGIEEHDQEGRVITLEFDDFYMITLYTPNSKRGLERLDYRM-EWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+E+D+ NP NR++ GF+DEER+ F L +GF+DT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEVDLKNPKSNRKNPGFSDEEREKFTC-VLEEGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF++S+ L K D+ I +V GSDH P+ L
Sbjct: 191 YPDQEGAYSWWSYRMGARAKNIGWRLDYFVISERLKHKITDAKINSEVMGSDHCPVEL 248
>gi|358065851|ref|ZP_09152385.1| exodeoxyribonuclease [Clostridium hathewayi WAL-18680]
gi|356695714|gb|EHI57339.1| exodeoxyribonuclease [Clostridium hathewayi WAL-18680]
Length = 251
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 129/180 (71%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV YG+GI +HD EGR++TAEF +++++CY PNS DGL RL YR+ EW+ + +Y+
Sbjct: 73 EPVSVAYGIGIEEHDKEGRVITAEFPEYYVVTCYTPNSKDGLARLPYRM-EWEDAFLAYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE+KKPVI GDLN AHQEID+ NP NR++AGF+DEER F ++ L+ GF+DT+R
Sbjct: 132 KGLEEKKPVIFCGDLNVAHQEIDLKNPKTNRKNAGFSDEERGKF-SDVLAAGFIDTYRYF 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W YR R N GWR+DYF VS++L D+ + I +V GSDH P+ L++
Sbjct: 191 YPDKTEVYSWWSYRFSARAKNAGWRIDYFCVSEALKDRLVSADIHMEVQGSDHCPVELVI 250
>gi|256846719|ref|ZP_05552175.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_36A2]
gi|256717939|gb|EEU31496.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_36A2]
Length = 253
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 124/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLGI +HD EGR++T EF+ F++++ Y PNS D L RL YR+T W+ Y+
Sbjct: 72 EPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYRMT-WEDEFRKYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEKKKPV++ GDLN AH+EID+ NP NRR+AGFTDEER F L GF+DTFR
Sbjct: 131 KNLEKKKPVVVCGDLNVAHEEIDLKNPKTNRRNAGFTDEERGKF-TELLDSGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR R+ N GWR+DYF+VS+ L D+ I + GSDH P+ LIL
Sbjct: 190 YPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEIHTQIEGSDHCPVVLIL 249
>gi|336435960|ref|ZP_08615673.1| exodeoxyribonuclease [Lachnospiraceae bacterium 1_4_56FAA]
gi|336008000|gb|EGN38019.1| exodeoxyribonuclease [Lachnospiraceae bacterium 1_4_56FAA]
Length = 250
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 126/181 (69%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+ VTYG+GI +HD EGR++T EF+ F+ ++ Y PNS + L+RL YR+ W+ +Y+
Sbjct: 72 EPIGVTYGIGIEEHDQEGRVITCEFEDFYFVTVYTPNSQNELKRLDYRM-RWEDDFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPV++TGD+N AH EID+ NP NR++AGFTDEER F L GF+DTFR
Sbjct: 131 KALDEKKPVVVTGDMNVAHAEIDLKNPKSNRQNAGFTDEERGKF-TELLDAGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWR+DYF VS+ + D+ D+ IL D+ GSDH P+ L L
Sbjct: 190 YPDQEGIYSWWSYRFKAREKNAGWRIDYFCVSERMKDRLSDAKILTDIYGSDHCPVCLEL 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|331002672|ref|ZP_08326187.1| exodeoxyribonuclease [Lachnospiraceae oral taxon 107 str. F0167]
gi|330407085|gb|EGG86589.1| exodeoxyribonuclease [Lachnospiraceae oral taxon 107 str. F0167]
Length = 262
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 126/182 (69%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP+ VTYG+GI +HD+EGR++TAE+D F+L++CY PNS GL RL YR+ W+ + YV
Sbjct: 83 KPIGVTYGIGIEEHDNEGRVITAEYDDFYLITCYTPNSQRGLTRLDYRMA-WEDAFLDYV 141
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+LE+KKPVI GDLN AH+EID+ NP NR++AGFTDEER LS GF D+FR
Sbjct: 142 LKLEEKKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKMDI-VLSSGFADSFRVL 200
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W Y G R N GWR+DYF+VS L D+ ++ I D+ GSDH P+ L +
Sbjct: 201 YPDKEGAYSWWSYMGGARAKNVGWRIDYFIVSDKLKDRIKEAKIHSDILGSDHCPVELDI 260
Query: 181 KL 182
++
Sbjct: 261 EI 262
>gi|229104299|ref|ZP_04234968.1| Exodeoxyribonuclease [Bacillus cereus Rock3-28]
gi|229117223|ref|ZP_04246601.1| Exodeoxyribonuclease [Bacillus cereus Rock1-3]
gi|423378475|ref|ZP_17355759.1| exodeoxyribonuclease [Bacillus cereus BAG1O-2]
gi|423448243|ref|ZP_17425122.1| exodeoxyribonuclease [Bacillus cereus BAG5O-1]
gi|423540784|ref|ZP_17517175.1| exodeoxyribonuclease [Bacillus cereus HuB4-10]
gi|423547021|ref|ZP_17523379.1| exodeoxyribonuclease [Bacillus cereus HuB5-5]
gi|423623188|ref|ZP_17598966.1| exodeoxyribonuclease [Bacillus cereus VD148]
gi|228666123|gb|EEL21587.1| Exodeoxyribonuclease [Bacillus cereus Rock1-3]
gi|228678997|gb|EEL33205.1| Exodeoxyribonuclease [Bacillus cereus Rock3-28]
gi|401128837|gb|EJQ36520.1| exodeoxyribonuclease [Bacillus cereus BAG5O-1]
gi|401171972|gb|EJQ79193.1| exodeoxyribonuclease [Bacillus cereus HuB4-10]
gi|401178742|gb|EJQ85915.1| exodeoxyribonuclease [Bacillus cereus HuB5-5]
gi|401258965|gb|EJR65143.1| exodeoxyribonuclease [Bacillus cereus VD148]
gi|401635242|gb|EJS52998.1| exodeoxyribonuclease [Bacillus cereus BAG1O-2]
Length = 252
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 126/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGR++T EF+ F++++ Y PNS GL RL YR+ EW+ +Y+
Sbjct: 73 EPLSVTYGLGIEEHDQEGRVITLEFEDFYMITLYTPNSKRGLERLDYRM-EWEDDFRTYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+L++KKPV+ GDLN AH+EID+ NP NR++ GF+DEER+ F L +GFVDT+R
Sbjct: 132 KQLDEKKPVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKF-TRILEEGFVDTYRHL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + + D+ I ++ GSDH P+ L
Sbjct: 191 YPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSERIKGQITDAKINSEIMGSDHCPVEL 248
>gi|384898191|ref|YP_005773619.1| exodeoxyribonuclease III [Helicobacter pylori Lithuania75]
gi|317013296|gb|ADU83904.1| exodeoxyribonuclease III [Helicobacter pylori Lithuania75]
Length = 250
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ Y PNS L RLSYRI+ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRIS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|348679732|gb|EGZ19548.1| hypothetical protein PHYSODRAFT_408364 [Phytophthora sojae]
Length = 280
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 126/200 (63%), Gaps = 21/200 (10%)
Query: 2 KPLSVTYGLGISDHDS-------------EGRLVTAEFDSFFLLSCYVPNSGDGLRRLSY 48
KPLSV + + DHDS EGR + E+ F+L+ YVPN+G L RL +
Sbjct: 80 KPLSVKDEIIVGDHDSKGVSKSANSGKDQEGRFLALEYPKFWLVHTYVPNAGGKLERLDF 139
Query: 49 RITEWDPSLSSYVKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGAN 108
R +WD ++ +KE+EK KPV+ GDLN AHQEIDI+NP GN+RSAGFTDEER+SFG N
Sbjct: 140 RTNQWDKAMLREMKEMEKTKPVVWCGDLNVAHQEIDIHNPKGNKRSAGFTDEERESFG-N 198
Query: 109 FLSKGFVDTFRAQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKF-------HD 161
L GFVDTFR H V Y+Y+GYRH R N+GWRLDYF+VS+ L
Sbjct: 199 ILENGFVDTFRHLHPDKVEYSYFGYRHNMRAQNKGWRLDYFVVSEKLMPNVVSVFGWERS 258
Query: 162 SYILPDVTGSDHSPIGLILK 181
SYI V GSDH PIGL L+
Sbjct: 259 SYIRGSVVGSDHLPIGLELE 278
>gi|218231608|ref|YP_002368543.1| exodeoxyribonuclease III [Bacillus cereus B4264]
gi|218159565|gb|ACK59557.1| exodeoxyribonuclease III [Bacillus cereus B4264]
Length = 252
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 127/178 (71%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGL I +HD EGRL+T EF+ F++++ Y PNS GL RL YR+ +W+ SY+
Sbjct: 73 EPLSVTYGLDIEEHDQEGRLITLEFEDFYMITLYTPNSKRGLERLDYRM-KWEDDFRSYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+EID+ NP NR++ GF+DEER+ F ++ L +GF+DT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKF-SSILEEGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + D+ ++ I +V GSDH P+ L
Sbjct: 191 YPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEVMGSDHCPVEL 248
>gi|229098205|ref|ZP_04229152.1| Exodeoxyribonuclease [Bacillus cereus Rock3-29]
gi|423441531|ref|ZP_17418437.1| exodeoxyribonuclease [Bacillus cereus BAG4X2-1]
gi|423464605|ref|ZP_17441373.1| exodeoxyribonuclease [Bacillus cereus BAG6O-1]
gi|423533947|ref|ZP_17510365.1| exodeoxyribonuclease [Bacillus cereus HuB2-9]
gi|228685103|gb|EEL39034.1| Exodeoxyribonuclease [Bacillus cereus Rock3-29]
gi|402418192|gb|EJV50492.1| exodeoxyribonuclease [Bacillus cereus BAG4X2-1]
gi|402420872|gb|EJV53143.1| exodeoxyribonuclease [Bacillus cereus BAG6O-1]
gi|402464166|gb|EJV95866.1| exodeoxyribonuclease [Bacillus cereus HuB2-9]
Length = 252
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 126/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGR++T EF+ F++++ Y PNS GL RL YR+ EW+ +Y+
Sbjct: 73 EPLSVTYGLGIEEHDQEGRVITLEFEDFYMITLYTPNSKRGLERLDYRM-EWEDDFRTYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+L++KKPV+ GDLN AH+EID+ NP NR++ GF+DEER+ F L +GFVDT+R
Sbjct: 132 KQLDEKKPVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKF-TRILEEGFVDTYRHL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + + D+ I ++ GSDH P+ L
Sbjct: 191 YPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSERIKGQITDAKINSEIMGSDHCPVEL 248
>gi|167748893|ref|ZP_02421020.1| hypothetical protein ANACAC_03667 [Anaerostipes caccae DSM 14662]
gi|317470265|ref|ZP_07929659.1| exodeoxyribonuclease III [Anaerostipes sp. 3_2_56FAA]
gi|167651863|gb|EDR95992.1| exodeoxyribonuclease III [Anaerostipes caccae DSM 14662]
gi|316902238|gb|EFV24158.1| exodeoxyribonuclease III [Anaerostipes sp. 3_2_56FAA]
Length = 251
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 126/182 (69%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPLSV G+G+ + D EGR++T EFD +FL++CY PNS L RLSYR+ +W+ + Y
Sbjct: 72 IKPLSVKNGIGVDEFDHEGRVITLEFDDYFLVTCYTPNSQSELARLSYRM-DWEENFREY 130
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ +LE+ KPVIL GDLN AH EID+ NP NR++AGFTDEER+ F L GF+DTFR
Sbjct: 131 LLKLEEDKPVILCGDLNVAHTEIDLKNPKTNRKNAGFTDEEREKF-TKLLEAGFIDTFRH 189
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ V Y++W YR R+ N GWR+DYF VS+ L ++ ++ I D+ GSDH P+GL
Sbjct: 190 FYPDVTEAYSWWSYRFRAREKNAGWRIDYFCVSEGLEERLAEAVIHTDIYGSDHCPVGLY 249
Query: 180 LK 181
L+
Sbjct: 250 LE 251
>gi|198276716|ref|ZP_03209247.1| hypothetical protein BACPLE_02915 [Bacteroides plebeius DSM 17135]
gi|198270241|gb|EDY94511.1| exodeoxyribonuclease III [Bacteroides plebeius DSM 17135]
Length = 252
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 128/182 (70%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL VTYGLGI +HD EGR++T E + FFL++ Y PNS DGL+RL YR+T WD +Y+
Sbjct: 73 QPLQVTYGLGIDEHDHEGRVITLEMEKFFLVTVYTPNSQDGLKRLDYRMT-WDDDFRAYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
++L++ KPV++ GDLN AH+EID+ NP NR +AGFTD+ER+ F L GF+DTFR
Sbjct: 132 QKLDQSKPVLVCGDLNVAHKEIDLKNPKTNRMNAGFTDQEREKFQL-LLDAGFIDTFRYF 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W YR R+ N GWR+DYFL S SLADK ++ I ++ GSDH P+ + +
Sbjct: 191 YPEQTNIYSWWSYRFKAREKNAGWRIDYFLASASLADKLKEAKIHTEIFGSDHCPVEVTV 250
Query: 181 KL 182
++
Sbjct: 251 EI 252
>gi|66817330|ref|XP_642518.1| hypothetical protein DDB_G0277701 [Dictyostelium discoideum AX4]
gi|161784257|sp|P51173.2|APEA_DICDI RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
Full=Class II apurinic/apyrimidinic(AP)-endonuclease
gi|60470608|gb|EAL68586.1| hypothetical protein DDB_G0277701 [Dictyostelium discoideum AX4]
Length = 361
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/184 (51%), Positives = 131/184 (71%), Gaps = 4/184 (2%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGD-GLRRLSYRITEWDPSLSSY 60
KP ++T+G+GI+ HD+EGR++T E+D F++++ Y+PN+G GL+RL YRI EWD +Y
Sbjct: 178 KPNAITFGIGIAKHDNEGRVITLEYDQFYIVNTYIPNAGTRGLQRLDYRIKEWDVDFQAY 237
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+++L KP+I GDLN AH EID+ NP N++SAGFT EER SF +NFL KG+VD++R
Sbjct: 238 LEKLNATKPIIWCGDLNVAHTEIDLKNPKTNKKSAGFTIEERTSF-SNFLEKGYVDSYRH 296
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDS-YILPDVTGSDHSPIGL 178
+ G G YT+W Y GGR N GWRLDYF+VS+ L D S + V GSDH PIG+
Sbjct: 297 FNPGKEGSYTFWSYLGGGRSKNVGWRLDYFVVSKRLMDSIKISPFHRTSVMGSDHCPIGV 356
Query: 179 ILKL 182
++ L
Sbjct: 357 VVDL 360
>gi|226322793|ref|ZP_03798311.1| hypothetical protein COPCOM_00565 [Coprococcus comes ATCC 27758]
gi|225208774|gb|EEG91128.1| exodeoxyribonuclease III [Coprococcus comes ATCC 27758]
Length = 231
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 125/181 (69%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGR++T EF+ F+ ++ Y PNS L RL YR+T W+ + +Y+
Sbjct: 53 EPLSVTYGLGIEEHDQEGRVITLEFEDFYFITVYTPNSQSELARLDYRMT-WEDAFLAYL 111
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE+ KPVI GDLN AH+EID+ NP NR++AGFTDEER F A L GF+DT+R
Sbjct: 112 KKLEETKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERAKFSA-LLDAGFIDTYRYF 170
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWR+DYF S++L + D+ IL +V GSDH P+ L
Sbjct: 171 YPDKEGIYSWWSYRFKAREKNAGWRIDYFCTSKALESRLEDAKILTNVFGSDHCPVELDF 230
Query: 181 K 181
K
Sbjct: 231 K 231
>gi|229168476|ref|ZP_04296199.1| Exodeoxyribonuclease [Bacillus cereus AH621]
gi|423592321|ref|ZP_17568352.1| exodeoxyribonuclease [Bacillus cereus VD048]
gi|228614882|gb|EEK71984.1| Exodeoxyribonuclease [Bacillus cereus AH621]
gi|401230563|gb|EJR37070.1| exodeoxyribonuclease [Bacillus cereus VD048]
Length = 252
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 124/178 (69%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SVTYGLGI +HD EGR++T EFD F++++ Y PNS GL RL YR+ EW+ +Y+
Sbjct: 73 EPISVTYGLGIEEHDQEGRVITLEFDDFYMITLYTPNSKRGLERLDYRM-EWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+E+D+ NP NR++ GF+DEER+ F L GF+DT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEVDLKNPKSNRKNPGFSDEEREKFTC-VLEAGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF++S+ L K D+ I +V GSDH P+ L
Sbjct: 191 YPDQEGAYSWWSYRMGARAKNIGWRLDYFVISERLKHKITDAKINSEVMGSDHCPVEL 248
>gi|291543155|emb|CBL16265.1| exodeoxyribonuclease III [Ruminococcus bromii L2-63]
Length = 252
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 129/182 (70%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V YG+GI +HD EGR++TAEFD+ F+++CY PNS L+RL YR+ +W+ +Y+
Sbjct: 73 EPLNVCYGIGIDEHDHEGRVITAEFDNCFVVTCYTPNSQSELKRLDYRM-KWEDDFKAYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE+KKPVI+ GDLN AH+EID+ NP NR++AGFTDEER A L GF+DT+R
Sbjct: 132 KKLEEKKPVIMCGDLNVAHKEIDLKNPKTNRKNAGFTDEERSKMTA-LLDDGFIDTYRYF 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWR+DYF+VS++L K + I ++ GSDH P+ L +
Sbjct: 191 YPDTEGVYSWWSYRFKAREKNAGWRIDYFIVSKALESKLDGAKIHTEILGSDHCPVELTI 250
Query: 181 KL 182
+
Sbjct: 251 DI 252
>gi|218898840|ref|YP_002447251.1| exodeoxyribonuclease III [Bacillus cereus G9842]
gi|218542018|gb|ACK94412.1| exodeoxyribonuclease III [Bacillus cereus G9842]
Length = 252
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGL I +HD EGRL+T EF+ F++++ Y PNS GL RL YR+ +W+ SY+
Sbjct: 73 EPLSVTYGLEIEEHDQEGRLITLEFEDFYMITLYTPNSKRGLERLDYRM-KWEDDFRSYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+EID+ NP NR++ GF+DEER+ F L +GF+DT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTC-ILEEGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + D+ ++ I +V GSDH P+ L
Sbjct: 191 YSDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEVMGSDHCPVEL 248
>gi|326202355|ref|ZP_08192224.1| exodeoxyribonuclease III [Clostridium papyrosolvens DSM 2782]
gi|325987473|gb|EGD48300.1| exodeoxyribonuclease III [Clostridium papyrosolvens DSM 2782]
Length = 253
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP+S + G+GI +HD+EGR++T EF+ FFL++ Y PNS L RL YR+ +W+ Y
Sbjct: 72 IKPVSSSCGIGIEEHDNEGRVITLEFEEFFLVNVYTPNSKRELERLEYRM-KWEDDFREY 130
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K+LE+ KPVI+ GD+N AHQEID+ NP N+RSAGFT EER+ F + L GFVDTFR
Sbjct: 131 LKQLEQTKPVIICGDMNVAHQEIDLKNPRSNKRSAGFTMEEREKF-SQLLEHGFVDTFRM 189
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G YT+W Y R+ N GWR+DYF VS +L D+ + I D GSDH P+GL
Sbjct: 190 LYPDKTGAYTWWSYMFKSREKNAGWRIDYFCVSGALKDRIEAAEIYSDTMGSDHCPVGLT 249
Query: 180 LK 181
+K
Sbjct: 250 IK 251
>gi|294781992|ref|ZP_06747324.1| exodeoxyribonuclease III [Fusobacterium sp. 1_1_41FAA]
gi|340754328|ref|ZP_08691085.1| exodeoxyribonuclease [Fusobacterium sp. 2_1_31]
gi|229423850|gb|EEO38897.1| exodeoxyribonuclease [Fusobacterium sp. 2_1_31]
gi|294481803|gb|EFG29572.1| exodeoxyribonuclease III [Fusobacterium sp. 1_1_41FAA]
Length = 253
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLGI +HD EGR++T EF+ F++++ Y PNS D L RL YR+ W+ Y+
Sbjct: 72 EPLSVSYGLGIEEHDKEGRVITLEFEKFYMITVYTPNSKDELLRLDYRMV-WEDEFRKYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEKKKPV++ GDLN AH+EID+ NP NRR+AGFTDEER F L GF+DTFR
Sbjct: 131 KNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKF-TELLESGFIDTFRYF 189
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR RK N GWR+DYF+VS++L D+ I GSDH P+ L L
Sbjct: 190 YPDLEHAYSWWSYRANARKNNTGWRIDYFVVSKALEKYLVDAEIHAQTEGSDHCPVVLFL 249
>gi|237740967|ref|ZP_04571448.1| exodeoxyribonuclease III [Fusobacterium sp. 4_1_13]
gi|294784430|ref|ZP_06749721.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_27]
gi|229431011|gb|EEO41223.1| exodeoxyribonuclease III [Fusobacterium sp. 4_1_13]
gi|294488002|gb|EFG35357.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_27]
Length = 253
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 124/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V+YGLGI +HD EGR++T EF+ F++++ Y PNS D L RL YR+T W+ Y+
Sbjct: 72 EPLTVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYRMT-WEDEFRKYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEKKKPV++ GDLN AH+EID+ NP NRR+AGFTDEER F L GF+DTFR
Sbjct: 131 KNLEKKKPVVVCGDLNVAHEEIDLKNPKTNRRNAGFTDEERGKF-TELLDSGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR R+ N GWR+DYF+VS+ L D+ I + GSDH P+ LIL
Sbjct: 190 YPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEIHTQIEGSDHCPVVLIL 249
>gi|145511051|ref|XP_001441453.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408703|emb|CAK74056.1| unnamed protein product [Paramecium tetraurelia]
Length = 374
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 123/184 (66%), Gaps = 9/184 (4%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KP+S+ Y +GI HD EGR++TAEF+ F L++CYVPNSGD L RL+YR EWD +Y
Sbjct: 183 VKPISIKYDMGIEKHDQEGRIITAEFEKFNLVACYVPNSGDKLDRLNYRTQEWDVDFQNY 242
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAG--------FTDEERQSFGANFLSK 112
+ +L++ K I+ GDLN +H EID+ NP GN+RSAG FT EER SF + FLSK
Sbjct: 243 LDKLKQTKNTIICGDLNVSHTEIDLANPEGNKRSAGQLIIYDQRFTQEERDSF-SKFLSK 301
Query: 113 GFVDTFRAQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSD 172
G++DTFR H + Y+Y+ R R+TN+GWR+DYF+V+Q S I + GSD
Sbjct: 302 GWIDTFRHLHPKEIKYSYFSPRFNSRETNKGWRIDYFVVNQEAVGSVIQSDIKTTILGSD 361
Query: 173 HSPI 176
H PI
Sbjct: 362 HVPI 365
>gi|422339748|ref|ZP_16420705.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp.
polymorphum F0401]
gi|355370591|gb|EHG17971.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp.
polymorphum F0401]
Length = 253
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLGI +HD EGR++T EF+ F++++ Y PNS D L RL YR+ W+ Y+
Sbjct: 72 EPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYRMV-WEDEFRKYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEKKKPV++ GDLN AH+EID+ NP NRR+AGFTDEER F L GF+DTFR
Sbjct: 131 KNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKF-TELLDSGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR RK N GWR+DYF+VS+ L D+ I GSDH P+ L L
Sbjct: 190 YPNLEQVYSWWSYRANARKNNAGWRIDYFVVSKGLEKNLVDAEIHSQTEGSDHCPVVLFL 249
Query: 181 KL 182
L
Sbjct: 250 DL 251
>gi|75759849|ref|ZP_00739924.1| Exodeoxyribonuclease III [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228902244|ref|ZP_04066404.1| Exodeoxyribonuclease [Bacillus thuringiensis IBL 4222]
gi|228966664|ref|ZP_04127710.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar sotto str.
T04001]
gi|402558959|ref|YP_006601683.1| exodeoxyribonuclease III [Bacillus thuringiensis HD-771]
gi|423359274|ref|ZP_17336777.1| exodeoxyribonuclease [Bacillus cereus VD022]
gi|423561854|ref|ZP_17538130.1| exodeoxyribonuclease [Bacillus cereus MSX-A1]
gi|434376797|ref|YP_006611441.1| exodeoxyribonuclease III [Bacillus thuringiensis HD-789]
gi|74492665|gb|EAO55806.1| Exodeoxyribonuclease III [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228793040|gb|EEM40596.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228857359|gb|EEN01859.1| Exodeoxyribonuclease [Bacillus thuringiensis IBL 4222]
gi|401085146|gb|EJP93392.1| exodeoxyribonuclease [Bacillus cereus VD022]
gi|401202111|gb|EJR08976.1| exodeoxyribonuclease [Bacillus cereus MSX-A1]
gi|401787611|gb|AFQ13650.1| exodeoxyribonuclease III [Bacillus thuringiensis HD-771]
gi|401875354|gb|AFQ27521.1| exodeoxyribonuclease III [Bacillus thuringiensis HD-789]
Length = 252
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGL I +HD EGRL+T EF+ F++++ Y PNS GL RL YR+ +W+ SY+
Sbjct: 73 EPLSVTYGLEIEEHDQEGRLITLEFEDFYMITLYTPNSKRGLERLDYRM-KWEDDFRSYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+EID+ NP NR++ GF+DEER+ F L +GF+DT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTC-ILEEGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + D+ ++ I +V GSDH P+ L
Sbjct: 191 YSDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEVMGSDHCPVEL 248
>gi|210622632|ref|ZP_03293292.1| hypothetical protein CLOHIR_01240 [Clostridium hiranonis DSM 13275]
gi|210154133|gb|EEA85139.1| hypothetical protein CLOHIR_01240 [Clostridium hiranonis DSM 13275]
Length = 250
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 124/181 (68%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSV YG+GI +HD EGR++T EF+ F+ ++ Y PNS L+RL YR+ W+ +Y+
Sbjct: 72 KPLSVAYGIGIDEHDHEGRVITLEFEDFYFVTVYTPNSQTELKRLEYRM-RWEDDFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L+ KKPV++ GDLN AH+EID+ NP NR++AGFTDEER F FL GF+DTFR
Sbjct: 131 KNLDSKKPVVMCGDLNVAHKEIDLKNPKTNRKNAGFTDEERNKF-TEFLESGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF S+S+ D+ + I +V GSDH P+ L++
Sbjct: 190 YPDAEGMYSWWSYRFNARKNNAGWRIDYFCTSESMKDRLVSAKIHNEVLGSDHCPVELVI 249
Query: 181 K 181
+
Sbjct: 250 E 250
>gi|167759302|ref|ZP_02431429.1| hypothetical protein CLOSCI_01649 [Clostridium scindens ATCC 35704]
gi|336422208|ref|ZP_08602360.1| exodeoxyribonuclease [Lachnospiraceae bacterium 5_1_57FAA]
gi|167663176|gb|EDS07306.1| exodeoxyribonuclease III [Clostridium scindens ATCC 35704]
gi|336009118|gb|EGN39116.1| exodeoxyribonuclease [Lachnospiraceae bacterium 5_1_57FAA]
Length = 250
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 127/181 (70%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV+YG+GI +HD EGR++T EF+ ++ ++ Y PNS + L RL YR+ +W+ +Y+
Sbjct: 72 EPISVSYGIGIEEHDQEGRVITLEFEDYYFITVYTPNSQNELARLPYRM-QWEDDFLAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE+ KPVI GDLN AH+EID+ NP NR++AGFTDEER F + + GF+DTFR
Sbjct: 131 KKLEEAKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERAKF-TSLVDAGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R N GWR+DYF VS+SL ++ D+ IL DV GSDH PI L +
Sbjct: 190 YPDAQGIYSWWSYRFSARAKNAGWRIDYFCVSESLEERLVDAKILTDVMGSDHCPIVLEM 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|407706141|ref|YP_006829726.1| hypothetical protein MC28_2905 [Bacillus thuringiensis MC28]
gi|407383826|gb|AFU14327.1| Exodeoxyribonuclease [Bacillus thuringiensis MC28]
Length = 252
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGR++T EF+ F++++ Y PNS GL RL YR+ EW+ +Y+
Sbjct: 73 EPLSVTYGLGIEEHDQEGRVITLEFEDFYMITLYTPNSKRGLERLDYRM-EWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+L++KKPVI GDLN AH+EID+ NP NR++ GF+DEER+ F L +GFVDT+R
Sbjct: 132 KQLDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKF-TRILEEGFVDTYRHL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS + + D+ I ++ GSDH P+ L
Sbjct: 191 YPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSDRIKGQITDAKINSEIIGSDHCPVEL 248
>gi|218281326|ref|ZP_03487814.1| hypothetical protein EUBIFOR_00379 [Eubacterium biforme DSM 3989]
gi|218217511|gb|EEC91049.1| hypothetical protein EUBIFOR_00379 [Eubacterium biforme DSM 3989]
Length = 249
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 130/181 (71%), Gaps = 4/181 (2%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLS+ YG+ + +HD+EGR++T E+ +++++ Y PNSGDGL+RL YR+ EWD + S+Y+
Sbjct: 73 EPLSIRYGMNMEEHDTEGRVITLEYPEYYVVTVYTPNSGDGLKRLDYRM-EWDKAFSAYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L+K PV+ GD N A++EIDI NP N ++AGFTDEER SF N L+ FVDT+R+
Sbjct: 132 KSLDK--PVMACGDFNVANEEIDIKNPKTNHKNAGFTDEERNSFKENLLAY-FVDTYRSL 188
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R+ N GWR+DY+LVS L DK D+ IL D+ GSDH P+ L ++
Sbjct: 189 YPEKVEYSWWSYRFKAREKNAGWRIDYWLVSPELKDKIVDAKILTDIYGSDHCPVQLDIE 248
Query: 182 L 182
+
Sbjct: 249 V 249
>gi|262067405|ref|ZP_06027017.1| exodeoxyribonuclease III [Fusobacterium periodonticum ATCC 33693]
gi|291378968|gb|EFE86486.1| exodeoxyribonuclease III [Fusobacterium periodonticum ATCC 33693]
Length = 253
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLGI +HD EGR++T EF+ F++++ Y PNS D L+RL YR+ W+ Y+
Sbjct: 72 EPLSVSYGLGIEEHDKEGRVITLEFEKFYMITVYTPNSKDELQRLDYRMV-WEDEFRKYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEKKKPV++ GDLN AH+EID+ NP NRR+AGFTDEER F L GF DTFR
Sbjct: 131 KNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKF-TELLESGFTDTFRYF 189
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR RK N GWR+DYF+VS++L D+ I GSDH P+ L L
Sbjct: 190 YPDLEHAYSWWSYRANARKNNTGWRIDYFIVSKALDKYLVDAEIHAQTEGSDHCPVVLFL 249
>gi|345881123|ref|ZP_08832651.1| exodeoxyribonuclease [Prevotella oulorum F0390]
gi|343920840|gb|EGV31568.1| exodeoxyribonuclease [Prevotella oulorum F0390]
Length = 250
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 125/180 (69%), Gaps = 2/180 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL+V+YG+GI +HD EGR++T E++SFFL++ Y PNS D LRRL YR+ +W+ +Y+
Sbjct: 73 PLAVSYGIGIDEHDHEGRVITLEYESFFLVTVYTPNSQDELRRLDYRM-QWEDDFQAYLH 131
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L+++KPVI+ GD+N AH+EID+ NP NRR+AGFTDEER L GF+DTFR +
Sbjct: 132 RLDEQKPVIVCGDMNVAHEEIDLKNPKTNRRNAGFTDEERAKM-TQLLGHGFIDTFRTLY 190
Query: 123 RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
Y++W YR R+ N GWR+DYFL+S+ L + D+ I D+ GSDH P+ + L L
Sbjct: 191 PEQQTYSWWSYRFRAREKNTGWRIDYFLISERLRPQLTDAKIHTDIMGSDHCPVEVDLDL 250
>gi|427413104|ref|ZP_18903296.1| exodeoxyribonuclease III (xth) [Veillonella ratti ACS-216-V-Col6b]
gi|425715920|gb|EKU78906.1| exodeoxyribonuclease III (xth) [Veillonella ratti ACS-216-V-Col6b]
Length = 251
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/183 (50%), Positives = 124/183 (67%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPL+V YG+GI +HD EGR++TAE+D+F+L++CY PNS L RL YR+T W+ + +Y
Sbjct: 71 VKPLNVIYGIGIEEHDQEGRVITAEYDNFYLVTCYTPNSQRELARLEYRMT-WEDAFRAY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ EL+ KKPVIL GDLN AH EID+ NP NR++AGFTDEER+ L+ GF DTFR
Sbjct: 130 LLELDAKKPVILCGDLNVAHNEIDLKNPKTNRKNAGFTDEEREKM-TELLNAGFTDTFRK 188
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ V Y++W Y R N GWR+DYF+ S L ++ I PD+ GSDH P+ L
Sbjct: 189 LYPDVTDAYSWWSYMGKARDRNVGWRIDYFITSARLDKDIVEAKIHPDIFGSDHCPVELE 248
Query: 180 LKL 182
+ L
Sbjct: 249 INL 251
>gi|229134542|ref|ZP_04263353.1| Exodeoxyribonuclease [Bacillus cereus BDRD-ST196]
gi|228648935|gb|EEL04959.1| Exodeoxyribonuclease [Bacillus cereus BDRD-ST196]
Length = 252
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 124/178 (69%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SVTYGLGI +HD EGR++T EFD F++++ Y PNS GL RL YR+ EW+ +Y+
Sbjct: 73 EPISVTYGLGIEEHDQEGRVITLEFDDFYMITLYTPNSKRGLERLDYRM-EWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+E+D+ NP NR++ GF+DEER+ F L GF+DT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEVDLKNPKSNRKNPGFSDEEREKFTC-VLEAGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF++S+ L K D+ I ++ GSDH P+ L
Sbjct: 191 YPDQEGAYSWWSYRMGARAKNIGWRLDYFVISERLKHKITDAKINSEIMGSDHCPVEL 248
>gi|421526611|ref|ZP_15973218.1| exodeoxyribonuclease III [Fusobacterium nucleatum ChDC F128]
gi|402257168|gb|EJU07643.1| exodeoxyribonuclease III [Fusobacterium nucleatum ChDC F128]
Length = 253
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLGI +HD EGR++T EF+ F++++ Y PNS D L+RL YR+ W+ Y+
Sbjct: 72 EPLSVSYGLGIEEHDKEGRVITLEFEKFYMITVYTPNSKDELQRLDYRMV-WEDEFRKYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEKKKPV++ GDLN AH+EID+ NP NRR+AGFTDEER F L+ GF DTFR
Sbjct: 131 KNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKF-TELLAAGFTDTFRHF 189
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR RK N GWR+DYF+VS +L D+ I GSDH P+ L L
Sbjct: 190 YPDLEHAYSWWSYRANARKNNTGWRIDYFVVSNALDKYLVDAEIHAQTEGSDHCPVVLFL 249
Query: 181 KL 182
+
Sbjct: 250 EF 251
>gi|292670448|ref|ZP_06603874.1| exodeoxyribonuclease III [Selenomonas noxia ATCC 43541]
gi|292647858|gb|EFF65830.1| exodeoxyribonuclease III [Selenomonas noxia ATCC 43541]
Length = 250
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLSV+YG+GI +HD+EGR++T E +L++ Y PN+ L RL YR+ W+ S ++
Sbjct: 71 VKPLSVSYGIGIEEHDNEGRVITMELPDVYLVTVYTPNAKRALERLDYRMA-WEDSFRAF 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ +L KKPV++ GDLN AH EID+ NP NRR+AGFTDEER FG L+ GFVDTFRA
Sbjct: 130 LLDLRAKKPVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGKFG-ELLAAGFVDTFRA 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G YT+W Y R+TN GWR+DYFLVS L D+ + I D+ GSDH P+ L
Sbjct: 189 LYPDRTGAYTWWSYLRHARETNAGWRIDYFLVSAELRDRIAAAEIHSDIFGSDHCPVSLT 248
Query: 180 LK 181
LK
Sbjct: 249 LK 250
>gi|159906029|ref|YP_001549691.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C6]
gi|159887522|gb|ABX02459.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C6]
Length = 249
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 124/180 (68%), Gaps = 2/180 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP V YG+G ++HD EGR++T +FD ++L++ Y PNS GL RL YR +WD +Y
Sbjct: 71 IKPNEVIYGIGNNEHDGEGRVITLKFDEYYLVNVYTPNSQRGLTRLEYR-QKWDQDFLNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK LE KKPVI GDLN AH+E+D+ NP N ++AGFT EER+ F N ++ GF+DTFR
Sbjct: 130 VKTLENKKPVIFCGDLNVAHKEVDLKNPKTNVKNAGFTPEERKGFD-NIVNSGFLDTFRE 188
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
++ Y++W YR R N GWR+DYF +S+SL D++I+P++ GSDH P+G+I
Sbjct: 189 FNKEPDNYSWWSYRFNARARNIGWRIDYFCISESLRGNLKDAFIMPEIMGSDHCPVGIIF 248
>gi|347549181|ref|YP_004855509.1| putative 3'-exo-deoxyribonuclease exoA [Listeria ivanovii subsp.
ivanovii PAM 55]
gi|346982252|emb|CBW86246.1| Putative 3'-exo-deoxyribonuclease exoA [Listeria ivanovii subsp.
ivanovii PAM 55]
Length = 251
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/183 (50%), Positives = 130/183 (71%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I+P+SV YGL I +HD+EGR++T EF+ FF+++ Y PNS L+RL YR+T ++ ++ +Y
Sbjct: 71 IEPISVRYGLDIPEHDTEGRVITLEFEKFFMITVYTPNSQAELKRLDYRMT-FEDAILTY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK+L++ KPV+L GDLN AH+EID+ NP NR++AGF+DEER F FL GFVD+FR
Sbjct: 130 VKKLDETKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKF-TTFLEAGFVDSFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + G Y++W YR R N GWR+DYF+VS+ L D D+ I DV GSDH P+ L
Sbjct: 189 FYPDLEGAYSWWSYRMNARAQNTGWRIDYFVVSERLKDNLVDAKIHLDVLGSDHCPVELE 248
Query: 180 LKL 182
L +
Sbjct: 249 LNI 251
>gi|421077946|ref|ZP_15538906.1| exodeoxyribonuclease III Xth [Pelosinus fermentans JBW45]
gi|392523930|gb|EIW47096.1| exodeoxyribonuclease III Xth [Pelosinus fermentans JBW45]
Length = 250
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 118/179 (65%), Gaps = 3/179 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I PLSV YGL I +HD EGRL+T EF++FFL++ Y PNS L RL YR+ W+ +Y
Sbjct: 71 ITPLSVIYGLNIEEHDQEGRLITLEFENFFLVNVYTPNSKRELLRLDYRM-RWEDEFRTY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ L + KPVI+ GD+N AHQEIDI NP NRR+AGFTDEER A L GF DTFR
Sbjct: 130 LITLNQSKPVIICGDINVAHQEIDIKNPKTNRRNAGFTDEERDKMTA-LLEAGFTDTFRH 188
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ + YT+W Y R N GWR+DYFLVS +L + ++ I PDV GSDH PIGL
Sbjct: 189 IYPDKIDAYTWWSYMMNARARNIGWRIDYFLVSNTLREAIKEATIYPDVMGSDHCPIGL 247
>gi|45358575|ref|NP_988132.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis S2]
gi|44921333|emb|CAF30568.1| exonuclease III [Methanococcus maripaludis S2]
Length = 249
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 124/181 (68%), Gaps = 2/181 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP +V G+ S+H++EGR++T EFD ++L++ Y PNS GL RL YR +WD SY
Sbjct: 71 IKPNNVILGMENSEHNNEGRVITLEFDEYYLVNVYTPNSQRGLTRLEYR-QKWDEDFLSY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K LE KKPV+ GDLN AH+EID+ NP N ++AGFT EER F N ++ GF+DTFR
Sbjct: 130 IKTLETKKPVVFCGDLNVAHKEIDLKNPKTNVKNAGFTPEERNGFD-NIVNSGFLDTFRE 188
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W YR R N GWR+DYF +S+SL + D+YI+P+V GSDH P+G+I
Sbjct: 189 FNNEPDNYSWWSYRFNARARNIGWRIDYFCISKSLRNNLKDAYIMPEVMGSDHCPVGIIF 248
Query: 181 K 181
+
Sbjct: 249 E 249
>gi|228909564|ref|ZP_04073387.1| Exodeoxyribonuclease [Bacillus thuringiensis IBL 200]
gi|228849853|gb|EEM94684.1| Exodeoxyribonuclease [Bacillus thuringiensis IBL 200]
Length = 244
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 125/182 (68%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGRL+T EF+ F++++ Y PNS GL RL YR+ +W+ SY+
Sbjct: 65 EPLSVTYGLGIEEHDQEGRLITLEFEDFYMITLYTPNSKRGLERLDYRM-KWEDDFRSYI 123
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KK VI GDLN AH+EID+ NP NR++ GF+DEER+ F L +GFVDT+R
Sbjct: 124 KRLDEKKTVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTC-ILEEGFVDTYRYL 182
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR G R N GWRLDYF+VS+ + D+ + I +V GSDH P+ L +
Sbjct: 183 YPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEVKINSEVMGSDHCPVELYI 242
Query: 181 KL 182
Sbjct: 243 NF 244
>gi|383750553|ref|YP_005425656.1| exodeoxyribonuclease III [Helicobacter pylori ELS37]
gi|380875299|gb|AFF21080.1| exodeoxyribonuclease III [Helicobacter pylori ELS37]
Length = 250
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|242309877|ref|ZP_04809032.1| exodeoxyribonuclease LexA [Helicobacter pullorum MIT 98-5489]
gi|239523878|gb|EEQ63744.1| exodeoxyribonuclease LexA [Helicobacter pullorum MIT 98-5489]
Length = 256
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 121/178 (67%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSV Y +GIS HD EGR++TAE++ FFL++ Y PNS L RL YR+ EW+ +++
Sbjct: 76 KPLSVAYDMGISHHDKEGRIITAEYNDFFLVNVYTPNSKRELERLEYRM-EWEDDFRNFL 134
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KPVI+ GDLN AH+EID+ NP NRR+AGFTDEER+ L GF DTFR
Sbjct: 135 KNLEVTKPVIVCGDLNVAHKEIDLKNPKTNRRNAGFTDEEREKMSV-LLDSGFTDTFRYF 193
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
H + G Y++W Y R+ N GWR+DYFL S++L K + I P++ GSDH P+GL
Sbjct: 194 HPTLEGAYSWWSYMGKARENNTGWRIDYFLCSKALDSKLKSASIYPEIFGSDHCPVGL 251
>gi|229061336|ref|ZP_04198683.1| Exodeoxyribonuclease [Bacillus cereus AH603]
gi|423511766|ref|ZP_17488297.1| exodeoxyribonuclease [Bacillus cereus HuA2-1]
gi|228717951|gb|EEL69596.1| Exodeoxyribonuclease [Bacillus cereus AH603]
gi|402450027|gb|EJV81861.1| exodeoxyribonuclease [Bacillus cereus HuA2-1]
Length = 252
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 124/178 (69%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SVTYGLGI +HD EGR++T EFD F++++ Y PNS GL RL YR+ EW+ +Y+
Sbjct: 73 EPISVTYGLGIEEHDQEGRVITLEFDDFYMITLYTPNSKRGLERLDYRM-EWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+E+D+ NP NR++ GF+DEER+ F L GF+DT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEVDLKNPKSNRKNPGFSDEEREKFTC-VLEAGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF++S+ L K D+ I +V GSDH P+ L
Sbjct: 191 YPDQEGAYSWWSYRMGARAKNIGWRLDYFVISERLEHKIIDAKINSEVMGSDHCPVEL 248
>gi|373497233|ref|ZP_09587764.1| exodeoxyribonuclease III (xth) [Fusobacterium sp. 12_1B]
gi|404366853|ref|ZP_10972230.1| exodeoxyribonuclease III (xth) [Fusobacterium ulcerans ATCC 49185]
gi|313690462|gb|EFS27297.1| exodeoxyribonuclease III (xth) [Fusobacterium ulcerans ATCC 49185]
gi|371963724|gb|EHO81271.1| exodeoxyribonuclease III (xth) [Fusobacterium sp. 12_1B]
Length = 253
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 125/181 (69%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP+ V+YGLGI +HD EGR++T E+D F++++ Y PNS + L RLSYR++ W+ +YV
Sbjct: 72 KPIEVSYGLGIEEHDKEGRVITLEYDDFYMITVYTPNSQEELARLSYRMS-WEDEFRNYV 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+K KPVI+ GDLN AHQEID+ NP NR++AGF+DEER F L GFVD+FR
Sbjct: 131 MKLDKLKPVIICGDLNVAHQEIDLKNPKSNRKNAGFSDEERAKF-TELLKNGFVDSFRHF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR RK N GWR+DYF+VS+ L D + I + GSDH P+ L L
Sbjct: 190 YPELTGAYSWWSYRFNARKNNAGWRIDYFVVSERLKDIMEGAEIHNETLGSDHCPVVLKL 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|420484933|ref|ZP_14983551.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-4]
gi|420515427|ref|ZP_15013890.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-4c]
gi|420517129|ref|ZP_15015584.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-4d]
gi|393103068|gb|EJC03631.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-4]
gi|393123726|gb|EJC24194.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-4c]
gi|393124943|gb|EJC25409.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-4d]
Length = 250
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420456020|ref|ZP_14954844.1| exodeoxyribonuclease III [Helicobacter pylori Hp A-14]
gi|393071140|gb|EJB71927.1| exodeoxyribonuclease III [Helicobacter pylori Hp A-14]
Length = 250
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARNKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|238928084|ref|ZP_04659844.1| exodeoxyribonuclease III Xth [Selenomonas flueggei ATCC 43531]
gi|238884044|gb|EEQ47682.1| exodeoxyribonuclease III Xth [Selenomonas flueggei ATCC 43531]
Length = 250
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLSV YG+GIS HD+EGR++T EFD +L++ Y PN+ L RL YR+ W+ + ++
Sbjct: 71 VKPLSVAYGIGISAHDNEGRVITMEFDDVYLVTVYTPNAKRALERLDYRMM-WEDAFRAF 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ L KKPV++ GDLN AH EID+ NP NRR+AGFTDEER F L GF+DTFRA
Sbjct: 130 LLGLRAKKPVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGKF-TELLQAGFIDTFRA 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G YT+W Y R+TN GWR+DYFLVS L D+ + I D+ GSDH P+ L
Sbjct: 189 LYPDRTGAYTWWSYLRHARETNAGWRIDYFLVSAELRDRIAAAEIHADIFGSDHCPVSLT 248
Query: 180 LK 181
LK
Sbjct: 249 LK 250
>gi|423616001|ref|ZP_17591835.1| exodeoxyribonuclease [Bacillus cereus VD115]
gi|401260538|gb|EJR66711.1| exodeoxyribonuclease [Bacillus cereus VD115]
Length = 252
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGR++T EF+ F++++ Y PNS GL RL YR+ EW+ +Y+
Sbjct: 73 EPLSVTYGLGIEEHDQEGRVITLEFEDFYMITLYTPNSKRGLERLDYRM-EWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+L++KKPVI GDLN AH+EID+ NP NR++ GF+DEER+ F L +GFVDT+R
Sbjct: 132 KQLDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKF-TRILEEGFVDTYRHL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS + + D+ I ++ GSDH P+ L
Sbjct: 191 YPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSDRIKGQITDAKINSEIIGSDHCPVEL 248
>gi|325261710|ref|ZP_08128448.1| exodeoxyribonuclease III [Clostridium sp. D5]
gi|324033164|gb|EGB94441.1| exodeoxyribonuclease III [Clostridium sp. D5]
Length = 250
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 127/179 (70%), Gaps = 3/179 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I+PLSV YG+GI +HD EGR++T E++ F+ ++ Y PN+ + L RL YR+ +W+ ++
Sbjct: 71 IEPLSVVYGIGIEEHDQEGRVITLEYEDFYFVTVYTPNAQNELARLDYRM-KWEDDFRAW 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K+LE+ KPV++TGD+N AH+EID+ NP NR+SAGF+DEERQ F L GF+DTFR
Sbjct: 130 LKKLEENKPVVVTGDMNVAHKEIDLKNPKTNRKSAGFSDEERQKF-TELLDAGFIDTFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR R+ N GWR+DYF VS+ L D+ D+ IL D+ GSDH P+ L
Sbjct: 189 FYPDQEGIYSWWSYRFRAREKNAGWRIDYFCVSECLKDRLVDAGILTDIMGSDHCPVVL 247
>gi|422315442|ref|ZP_16396878.1| exodeoxyribonuclease III (xth) [Fusobacterium periodonticum D10]
gi|404592436|gb|EKA94265.1| exodeoxyribonuclease III (xth) [Fusobacterium periodonticum D10]
Length = 253
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLGI +HD EGR++T EF+ F++++ Y PNS D L RL YR+ W+ Y+
Sbjct: 72 EPLSVSYGLGIEEHDKEGRVITLEFEKFYMITVYTPNSKDELLRLDYRMV-WEDEFRKYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEKKKPV++ GDLN AH+EID+ NP NRR+AGFTDEER F L GF+DTFR
Sbjct: 131 KNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKF-TELLESGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR RK N GWR+DYF+VS++L D+ I GSDH P+ L L
Sbjct: 190 YPDLEHVYSWWSYRANARKNNTGWRIDYFVVSKALEKYLVDAEIHAQTEGSDHCPVVLFL 249
>gi|357059246|ref|ZP_09120090.1| exodeoxyribonuclease III [Selenomonas infelix ATCC 43532]
gi|355372575|gb|EHG19915.1| exodeoxyribonuclease III [Selenomonas infelix ATCC 43532]
Length = 250
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I+PLSV YG+G +HD EGR++T EF +L++ Y PNS + L RL YR+ W+ + ++
Sbjct: 71 IRPLSVNYGIGTPEHDHEGRVITMEFADVYLVTVYTPNSKNALARLDYRMV-WEDAFRAF 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ +L KKPV++ GDLN AH EID+ NP NRR+AGFTDEER F L+ GFVDTFRA
Sbjct: 130 LLDLRAKKPVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGKF-TELLNAGFVDTFRA 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ V G YT+W Y R+TN GWR+DYFLVS+ L ++ + I DV GSDH P+ L
Sbjct: 189 LYPDVTGAYTWWSYLRHARETNAGWRIDYFLVSEELRERIAAAEIHADVFGSDHCPVSLT 248
Query: 180 LK 181
LK
Sbjct: 249 LK 250
>gi|429738347|ref|ZP_19272158.1| exodeoxyribonuclease III [Prevotella saccharolytica F0055]
gi|429160421|gb|EKY02885.1| exodeoxyribonuclease III [Prevotella saccharolytica F0055]
Length = 249
Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 121/179 (67%), Gaps = 2/179 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PLSVTYG+G+ HD EGR++T E + F+L++ Y PNS D L+RL YR+T W+ +++
Sbjct: 73 PLSVTYGIGVDAHDHEGRVITLEMNDFYLVTVYTPNSQDELKRLDYRMT-WEDDFKTFLL 131
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L+ +KPVI+ GD+N AHQEIDI NP NRR+AGFTDEER+ L GF DTFR +
Sbjct: 132 ALDARKPVIVCGDMNVAHQEIDIKNPKTNRRNAGFTDEEREKMTV-LLDSGFTDTFRFMY 190
Query: 123 RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
V Y++W YR R+ N GWR+DYFLVS L + D+ I D+ GSDH P+ L LK
Sbjct: 191 PEEVTYSWWSYRFKARERNTGWRIDYFLVSDRLKPQIADAKIHTDILGSDHCPVELDLK 249
>gi|389575850|ref|ZP_10165878.1| exodeoxyribonuclease III [Eubacterium cellulosolvens 6]
gi|389311335|gb|EIM56268.1| exodeoxyribonuclease III [Eubacterium cellulosolvens 6]
Length = 250
Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 127/182 (69%), Gaps = 3/182 (1%)
Query: 2 KP-LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
KP L VTYG+G +HD EGR++T E+D+FFL++ Y PNS DGL+RL YR+T W+ S +Y
Sbjct: 71 KPALQVTYGIGEEEHDHEGRVITLEYDTFFLVTVYTPNSQDGLKRLDYRMT-WEDSFRAY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ +L++KKPVI+ GDLN AH+EID+ NP NR++AGFTDEER F L GF D+FR
Sbjct: 130 LGKLDEKKPVIVCGDLNVAHEEIDLKNPKTNRKNAGFTDEERGKF-TELLDAGFTDSFRY 188
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
H V Y++W YR R+ N GWR+DYFL S+ + +K + I ++ GSDH P+ L +
Sbjct: 189 LHPEDVEYSWWSYRFHAREKNAGWRIDYFLTSERVKEKIEQAVIHQEIFGSDHCPVELDI 248
Query: 181 KL 182
+
Sbjct: 249 SI 250
>gi|420417863|ref|ZP_14916958.1| exodeoxyribonuclease III [Helicobacter pylori NQ4044]
gi|393031044|gb|EJB32117.1| exodeoxyribonuclease III [Helicobacter pylori NQ4044]
Length = 250
Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDIKEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEMEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|148225041|ref|NP_001085229.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Xenopus
laevis]
gi|47937489|gb|AAH72056.1| MGC78928 protein [Xenopus laevis]
Length = 316
Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 125/182 (68%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VTYG+GI +HD EGR++TAEFDSFF+++ Y+PNS GL RL YR WD +Y+
Sbjct: 137 KPLNVTYGIGIEEHDKEGRVITAEFDSFFVIAAYIPNSSRGLVRLDYR-QRWDVDFRAYL 195
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L+ KKP+IL GDLN AHQEID+ NP N+++ GFT +ERQ FG L++G++D+FR
Sbjct: 196 KGLDSKKPLILCGDLNVAHQEIDLKNPKTNKKTPGFTPQERQGFG-ELLAEGYLDSFREL 254
Query: 122 HR-GVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWRLDYF++S++L D I V GSDH PI L++
Sbjct: 255 YPDKPSAYTFWTYMMNARAKNVGWRLDYFVLSKALRPALCDCKIRSKVMGSDHCPITLLM 314
Query: 181 KL 182
+
Sbjct: 315 AI 316
>gi|47568231|ref|ZP_00238934.1| exodeoxyribonuclease III [Bacillus cereus G9241]
gi|228986876|ref|ZP_04147003.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|47555059|gb|EAL13407.1| exodeoxyribonuclease III [Bacillus cereus G9241]
gi|228772825|gb|EEM21264.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 252
Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGR++T EF+ F++++ Y PNS GL RL YR+ +W+ Y+
Sbjct: 73 EPLSVTYGLGIEEHDQEGRVITLEFEDFYIITLYTPNSKRGLERLDYRM-KWEDDFRVYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+EID+ NP NR++ GF+DEER+ F L +GF+DT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTC-ILEEGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + D+ ++ I +V GSDH P+ L
Sbjct: 191 YPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEVMGSDHCPVEL 248
>gi|302876908|ref|YP_003845541.1| exodeoxyribonuclease III Xth [Clostridium cellulovorans 743B]
gi|307687596|ref|ZP_07630042.1| exodeoxyribonuclease III Xth [Clostridium cellulovorans 743B]
gi|302579765|gb|ADL53777.1| exodeoxyribonuclease III Xth [Clostridium cellulovorans 743B]
Length = 253
Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 127/181 (70%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLS +YGL I +HD EGR++T E+D F+L++ Y PNS + L RL YR+ EW+ + +Y+
Sbjct: 72 KPLSASYGLNIEEHDKEGRVITLEYDDFYLVTVYTPNSKEELARLEYRM-EWEDAFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LEK KPVI+ GDLN AH+EID+ NP NR++ GF+DEER F + L+ GF+DT+R
Sbjct: 131 KKLEKNKPVIVCGDLNVAHKEIDLKNPKTNRKNPGFSDEERAKF-SELLASGFIDTYRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R N GWR+DYF++S+ L DK + I ++ GSDH P+ L++
Sbjct: 190 YPDKEGAYSWWSYRFNARTKNAGWRIDYFVISEELKDKLVSAEIHNEILGSDHCPVELVI 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|420500328|ref|ZP_14998874.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-30]
gi|393152095|gb|EJC52396.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-30]
Length = 250
Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|313894410|ref|ZP_07827975.1| exodeoxyribonuclease III [Veillonella sp. oral taxon 158 str.
F0412]
gi|313441234|gb|EFR59661.1| exodeoxyribonuclease III [Veillonella sp. oral taxon 158 str.
F0412]
Length = 251
Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 93/183 (50%), Positives = 124/183 (67%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPLSVT G+GI +HD EGR++TAE+D+F+L+ CY PNS L RL YR+ W+ + +Y
Sbjct: 71 IKPLSVTNGIGIEEHDQEGRVITAEYDNFYLVCCYTPNSQRELARLEYRMA-WEDAFRNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ EL+KKKPVIL GDLN AHQEID+ NP NR++AGF+DEER L GF DTFR
Sbjct: 130 LLELDKKKPVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAKM-TELLGAGFTDTFRH 188
Query: 121 QH-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + Y++W Y R+ N GWR+DYF+ S+ L DK ++ I + GSDH P+ L
Sbjct: 189 LYPDAIEQYSWWSYMGKARERNTGWRIDYFITSKRLDDKIQEAKIHQQIFGSDHCPVELD 248
Query: 180 LKL 182
+ L
Sbjct: 249 IDL 251
>gi|266623165|ref|ZP_06116100.1| exodeoxyribonuclease III [Clostridium hathewayi DSM 13479]
gi|288865076|gb|EFC97374.1| exodeoxyribonuclease III [Clostridium hathewayi DSM 13479]
Length = 251
Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 128/182 (70%), Gaps = 5/182 (2%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YG+GI +HD EGR++TAEF +++++CY PNS DGL RL YR+ W+ + Y+
Sbjct: 73 EPLSVAYGIGIEEHDHEGRVITAEFSDYYVVTCYTPNSKDGLARLPYRMV-WEDAFLRYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE+KKPVI GDLN AH+EID+ NP NR++AGFTDEER F + L GF+DTFR
Sbjct: 132 KGLEEKKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKF-TDLLDAGFIDTFRWF 190
Query: 122 H--RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ R + Y++W YR R N GWR+DYF VS++L D+ + I +V GSDH P+ L+
Sbjct: 191 YPDREEI-YSWWSYRFSARSKNAGWRIDYFCVSEALKDRLVSADIHTEVLGSDHCPVELV 249
Query: 180 LK 181
++
Sbjct: 250 IE 251
>gi|392395397|ref|YP_006431999.1| exodeoxyribonuclease III [Desulfitobacterium dehalogenans ATCC
51507]
gi|390526475|gb|AFM02206.1| exodeoxyribonuclease III [Desulfitobacterium dehalogenans ATCC
51507]
Length = 250
Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 121/178 (67%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+G +HD EGR++T EF++F+L++ Y PNS GL RL YR+T W+ SY+
Sbjct: 72 EPLSVSYGIGKEEHDQEGRVITLEFETFYLVTVYAPNSQRGLARLDYRMT-WEEEFLSYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEK KPVI GDLN AH EID+ NP NR++AGF+DEER F + L GF+DTFR
Sbjct: 131 KSLEKSKPVIFCGDLNVAHTEIDLKNPKSNRKNAGFSDEERAKF-SGLLKNGFIDTFRHF 189
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ YT+W Y R N GWR+DYF VS+SL ++ D+ I + GSDH P+GL
Sbjct: 190 YPDKTDSYTWWSYMFNARTNNAGWRIDYFCVSESLKNELKDALIYDKIMGSDHCPVGL 247
>gi|422932904|ref|ZP_16965829.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
gi|339891952|gb|EGQ80860.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
Length = 253
Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLGI +HD EGR++T EF+ F++++ Y PNS D L RL YR+ W+ Y+
Sbjct: 72 EPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYRMV-WEDEFRKYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEKKKPV++ GDLN AH+EID+ NP NRR+AGFTDEER F L GF+DTFR
Sbjct: 131 KNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKF-TELLDSGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR R+ N GWR+DYF+VS+ L D+ I + GSDH P+ L L
Sbjct: 190 YPNLEQVYSWWSYRGRARENNTGWRIDYFVVSKGLEKNLVDAEIHTQIEGSDHCPVVLFL 249
Query: 181 KL 182
L
Sbjct: 250 NL 251
>gi|373107112|ref|ZP_09521412.1| exodeoxyribonuclease III (xth) [Stomatobaculum longum]
gi|371652051|gb|EHO17477.1| exodeoxyribonuclease III (xth) [Stomatobaculum longum]
Length = 254
Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 129/182 (70%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP++V+YGLGI +HD EGR++T EF +++L+CY PNS + L+RL YR+ EW+ + +Y+
Sbjct: 75 KPVNVSYGLGIPEHDKEGRVITLEFPDYYVLTCYTPNSQNELKRLDYRM-EWEDAFFAYI 133
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKP+I GDLN AH+EID+ NP+ NRR+AGFTDEER+ L+ GFVD+FR
Sbjct: 134 KGLDQKKPLIYCGDLNVAHEEIDLKNPSTNRRNAGFTDEEREKM-TRVLTNGFVDSFRYL 192
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
H Y++W YR R+ N GWR+DYF+VS+ L D+ + I ++ GSDH P+ L +
Sbjct: 193 HPEEKDAYSWWSYRMKARERNVGWRIDYFIVSERLKDRIQGASIHSEILGSDHCPVELKI 252
Query: 181 KL 182
L
Sbjct: 253 DL 254
>gi|336401875|ref|ZP_08582631.1| exodeoxyribonuclease [Fusobacterium sp. 21_1A]
gi|336160344|gb|EGN63396.1| exodeoxyribonuclease [Fusobacterium sp. 21_1A]
Length = 253
Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLGI +HD EGR++T EF+ F++++ Y PNS D L RL YR+ W+ Y+
Sbjct: 72 EPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYRMV-WEDEFRKYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEKKKPV++ GDLN AH+EID+ NP NRR+AGFTDEER F L GF+DTFR
Sbjct: 131 KNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKF-TELLDSGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR R+ N GWR+DYF+VS+ L D+ I + GSDH P+ L L
Sbjct: 190 YPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEIHTQIEGSDHCPVVLFL 249
Query: 181 KL 182
L
Sbjct: 250 NL 251
>gi|238018561|ref|ZP_04598987.1| hypothetical protein VEIDISOL_00388 [Veillonella dispar ATCC 17748]
gi|237865032|gb|EEP66322.1| hypothetical protein VEIDISOL_00388 [Veillonella dispar ATCC 17748]
Length = 251
Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 93/183 (50%), Positives = 124/183 (67%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPLSVT G+GI +HD EGR++TAE+D+F+L+ CY PNS L RL YR+ W+ + +Y
Sbjct: 71 IKPLSVTNGIGIEEHDQEGRVITAEYDNFYLVCCYTPNSQRELARLEYRMA-WEDAFRNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ EL+KKKPVIL GDLN AHQEID+ NP NR++AGF+DEER L GF DTFR
Sbjct: 130 LLELDKKKPVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAKM-TELLGAGFTDTFRH 188
Query: 121 QH-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + Y++W Y R+ N GWR+DYF+ S+ L DK ++ I + GSDH P+ L
Sbjct: 189 LYPDAIEEYSWWSYMGKARERNTGWRIDYFITSKRLDDKIQEAKIHQQIFGSDHCPVELD 248
Query: 180 LKL 182
+ L
Sbjct: 249 IDL 251
>gi|423483329|ref|ZP_17460019.1| exodeoxyribonuclease III (xth) [Bacillus cereus BAG6X1-2]
gi|401140880|gb|EJQ48435.1| exodeoxyribonuclease III (xth) [Bacillus cereus BAG6X1-2]
Length = 252
Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 124/178 (69%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SVTYGLGI +HD EGR++T EFD F++++ Y PNS GL RL YR+ EW+ +Y+
Sbjct: 73 EPISVTYGLGIEEHDQEGRVITLEFDDFYMITLYTPNSKRGLERLDYRM-EWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPV+ GDLN AH+EID+ NP NR++ GF+DEER+ L +GF+DT+R
Sbjct: 132 KRLDEKKPVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKI-TRVLEEGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF++S+ L K D+ I +V GSDH P+ L
Sbjct: 191 YPEQEGAYSWWSYRMGARAKNIGWRLDYFIISERLKHKILDAKINSEVMGSDHCPVEL 248
>gi|313144803|ref|ZP_07806996.1| exodeoxyribonuclease LexA [Helicobacter cinaedi CCUG 18818]
gi|313129834|gb|EFR47451.1| exodeoxyribonuclease LexA [Helicobacter cinaedi CCUG 18818]
gi|396078071|dbj|BAM31447.1| exodeoxyribonuclease [Helicobacter cinaedi ATCC BAA-847]
Length = 251
Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 92/183 (50%), Positives = 125/183 (68%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPL VTY +GIS HD EGR++TAE++ F+L++ Y PN+ L RL YR+ EW+ ++
Sbjct: 71 IKPLQVTYDMGISHHDKEGRIITAEYERFYLVNVYTPNAKRELERLEYRM-EWEDDFRAF 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK+L+K KPV++ GDLN AH+EID+ NP NRR+AGFTDEER + L GF+DTFR
Sbjct: 130 VKKLKKHKPVVICGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKM-SELLESGFIDTFRH 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + G Y++W Y R+ N GWR+DYFL S SL D+ I P + GSDH P+GL
Sbjct: 189 FYPTLEGAYSWWSYMGKARENNTGWRIDYFLCSTSLESHLKDAKIYPHIFGSDHCPVGLS 248
Query: 180 LKL 182
+ +
Sbjct: 249 MDM 251
>gi|420494787|ref|ZP_14993354.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-16]
gi|393109942|gb|EJC10470.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-16]
Length = 250
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIGEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|423477848|ref|ZP_17454563.1| exodeoxyribonuclease [Bacillus cereus BAG6X1-1]
gi|402428773|gb|EJV60865.1| exodeoxyribonuclease [Bacillus cereus BAG6X1-1]
Length = 252
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 126/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSVTYGLGI +HD EGR++T EF+ F++++ Y PNS GL RL YR+ +W+ +Y+
Sbjct: 73 KPLSVTYGLGIEEHDQEGRVITLEFEDFYIITLYTPNSKRGLERLDYRM-KWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPV+ GDLN AH+EID+ NP NR++ GF+DEER+ F L +GF+DT+R
Sbjct: 132 KRLDEKKPVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKF-TRILEEGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + ++ ++ I +V GSDH P+ L
Sbjct: 191 YPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKNQITEAEINSEVMGSDHCPVEL 248
>gi|421145619|ref|ZP_15605476.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp. fusiforme
ATCC 51190]
gi|395487984|gb|EJG08882.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp. fusiforme
ATCC 51190]
Length = 253
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V+YGLGI +HD EGR++T EF+ F++++ Y PNS D L RL YR+T W+ Y+
Sbjct: 72 EPLTVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDKLLRLDYRMT-WEDEFRKYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEKKK V++ GDLN AH+EID+ NP NRR+AGFTDEER F L GF+DTFR
Sbjct: 131 KNLEKKKAVVVCGDLNVAHEEIDLKNPKTNRRNAGFTDEERGKF-TELLDSGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR R+ N GWR+DYF+VS+ L D+ I + GSDH P+ LIL
Sbjct: 190 YPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEIHTQIEGSDHCPVVLIL 249
Query: 181 KL 182
L
Sbjct: 250 DL 251
>gi|237743089|ref|ZP_04573570.1| exodeoxyribonuclease III [Fusobacterium sp. 7_1]
gi|229433385|gb|EEO43597.1| exodeoxyribonuclease III [Fusobacterium sp. 7_1]
Length = 253
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLGI +HD EGR++T EF+ F++++ Y PNS D L RL YR+ W+ Y+
Sbjct: 72 EPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYRMI-WEDEFRKYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEKKKPV++ GDLN AH+EID+ NP NRR+AGFTDEER F L GF+DTFR
Sbjct: 131 KNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKF-TELLDSGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR R+ N GWR+DYF+VS+ L D+ I + GSDH P+ L L
Sbjct: 190 YPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKELEKNLVDAEIHTQIEGSDHCPVVLFL 249
Query: 181 KL 182
L
Sbjct: 250 DL 251
>gi|304384068|ref|ZP_07366522.1| exodeoxyribonuclease III [Prevotella marshii DSM 16973]
gi|304334784|gb|EFM01060.1| exodeoxyribonuclease III [Prevotella marshii DSM 16973]
Length = 250
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 123/181 (67%), Gaps = 2/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P SV+YG+G+ HD EGR++T E F+L++ Y PNS DGL+RL+YR+ +W+ Y+
Sbjct: 72 QPQSVSYGMGVEAHDHEGRIITLEMPGFYLVTVYTPNSQDGLKRLAYRM-QWEEDFLQYI 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+L+ KKPVI+ GD+N AH+EIDI NP NR +AGFTDEER F LS+GF DTFR +
Sbjct: 131 KKLDAKKPVIICGDMNVAHEEIDIKNPKTNRHNAGFTDEERNKF-TTLLSEGFTDTFRYK 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R N GWR+DYF+VS L + D+ I + GSDH P+ + L
Sbjct: 190 YPEQVRYSWWSYRFQARAKNAGWRIDYFVVSNRLKPQIIDAKIHTAILGSDHCPVEVELN 249
Query: 182 L 182
L
Sbjct: 250 L 250
>gi|387015594|gb|AFJ49916.1| DNA-(apurinic or apyrimidinic site) lyase-like [Crotalus
adamanteus]
Length = 316
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 120/182 (65%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL VTYG+G +HD EGR++TAEF S+FL++ YVPN+G GL RL YR WD + SY+
Sbjct: 137 KPLDVTYGIGEEEHDKEGRVITAEFSSYFLVTTYVPNAGRGLVRLEYR-QRWDEAFRSYL 195
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L +KP+IL GDLN AHQEID+ NP GN+++AGFT EER F L GFVDTFR
Sbjct: 196 KGLAARKPLILCGDLNVAHQEIDLKNPKGNKKNAGFTPEERAGF-TQLLEAGFVDTFRHL 254
Query: 122 HRGV-VGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWRLDYF+VS+ L + DS I GSDH PI L +
Sbjct: 255 YPNTPYAYTFWTYMMNARAKNVGWRLDYFVVSKELQEGLCDSKIRSTALGSDHCPITLYV 314
Query: 181 KL 182
+
Sbjct: 315 AM 316
>gi|391340077|ref|XP_003744372.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like
[Metaseiulus occidentalis]
Length = 347
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/180 (54%), Positives = 123/180 (68%), Gaps = 3/180 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL+V YGL + +HDSEGR++T EF+ FFL++ YVPN+G GL RL YR+T WD Y+
Sbjct: 170 PLNVEYGLSLEEHDSEGRVITLEFEEFFLVNSYVPNAGRGLVRLDYRLT-WDRDFRKYLV 228
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L+KKK VILTGDLN AH EID+ NP N+++AGFT+EERQ + L +GFVDTFR +
Sbjct: 229 GLKKKKSVILTGDLNVAHNEIDLKNPKTNKKNAGFTEEERQGL-TDLLEEGFVDTFRKLY 287
Query: 123 RGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
G YT+W Y R N GWRLDYF+VS+ L D D+ I V GSDH P+ L LK
Sbjct: 288 PEREGAYTFWTYMMNARAKNVGWRLDYFIVSEDLIDNVIDNEIRSTVMGSDHCPVVLHLK 347
>gi|375364493|ref|YP_005132532.1| exodeoxyribonuclease III [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|421729528|ref|ZP_16168658.1| exodeoxyribonuclease III [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|371570487|emb|CCF07337.1| exodeoxyribonuclease III [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|407076498|gb|EKE49481.1| exodeoxyribonuclease III [Bacillus amyloliquefaciens subsp.
plantarum M27]
Length = 252
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 127/182 (69%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL V YGLGI DHD EGR++T EF++ F+++CY PN+ GL R+ YR+ +W+ Y+
Sbjct: 73 KPLHVFYGLGIDDHDQEGRVITLEFENLFVVNCYTPNAKRGLERIDYRL-QWEADFKEYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
++L++KKPVIL GDLN AH+EID+ NP NR++AGF+D+ER++F A L+ GF D+FR
Sbjct: 132 QKLDRKKPVILCGDLNVAHREIDLKNPKANRKNAGFSDQEREAFSA-LLNTGFTDSFRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWRLDY +VS L + ++ I D+ GSDH P+ + +
Sbjct: 191 YPDREGAYSWWSYRTNAREKNIGWRLDYVIVSDRLKPRISEAAICADIMGSDHCPVEMTV 250
Query: 181 KL 182
L
Sbjct: 251 DL 252
>gi|425790062|ref|YP_007017982.1| exodeoxyribonuclease III [Helicobacter pylori Aklavik117]
gi|425628377|gb|AFX91845.1| exodeoxyribonuclease III [Helicobacter pylori Aklavik117]
Length = 250
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ YVPNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINVEEHDKEGRVVTCEFESFYLVNVYVPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|451344782|ref|YP_007443413.1| exodeoxyribonuclease III [Bacillus amyloliquefaciens IT-45]
gi|449848540|gb|AGF25532.1| exodeoxyribonuclease III [Bacillus amyloliquefaciens IT-45]
Length = 252
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 127/184 (69%), Gaps = 7/184 (3%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL V YGLGI DHD EGR++T EF++ F+++CY PN+ GL R+ YR+ +W+ Y+
Sbjct: 73 KPLHVFYGLGIDDHDQEGRVITLEFENLFVVNCYTPNAKRGLERIDYRL-QWEADFKEYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFR-- 119
++L++KKPVIL GDLN AH+EID+ NP NR++AGF+D+ER++F A L+ GF D+FR
Sbjct: 132 QKLDRKKPVILCGDLNVAHREIDLKNPKANRKNAGFSDQEREAFSA-LLNTGFTDSFRYL 190
Query: 120 -AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
G GY++W YR R+ N GWRLDY +VS L + ++ I D+ GSDH P+ +
Sbjct: 191 YPDREG--GYSWWSYRTNAREKNIGWRLDYVIVSDRLKPRISEAAICADIMGSDHCPVEM 248
Query: 179 ILKL 182
+ L
Sbjct: 249 TVDL 252
>gi|52141752|ref|YP_085078.1| exodeoxyribonuclease III [Bacillus cereus E33L]
gi|51975221|gb|AAU16771.1| exodeoxyribonuclease III [Bacillus cereus E33L]
Length = 252
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 126/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGR++T EF+ F++++ Y PN+ GL RL YR+ +W+ +Y+
Sbjct: 73 EPLSVTYGLGIEEHDQEGRVITLEFEGFYIITLYTPNAKRGLERLDYRM-KWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+EID+ NP NR++ GF+DEER+ F L +GF+DT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTC-ILEEGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + ++ D+ I +V GSDH P+ L
Sbjct: 191 YPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERIKNQIKDAKINSEVMGSDHCPVEL 248
>gi|385222881|ref|YP_005772014.1| exodeoxyribonuclease III [Helicobacter pylori SouthAfrica7]
gi|317011660|gb|ADU85407.1| exodeoxyribonuclease III [Helicobacter pylori SouthAfrica7]
Length = 250
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ Y PNS L RL+YR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLNYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|385230800|ref|YP_005790716.1| exodeoxyribonuclease III [Helicobacter pylori Puno135]
gi|344337238|gb|AEN19199.1| exodeoxyribonuclease III [Helicobacter pylori Puno135]
Length = 250
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ YVPNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVVTCEFESFYLVNVYVPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420401021|ref|ZP_14900220.1| exodeoxyribonuclease III [Helicobacter pylori CPY3281]
gi|393016629|gb|EJB17788.1| exodeoxyribonuclease III [Helicobacter pylori CPY3281]
Length = 250
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ YVPNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVVTCEFESFYLVNVYVPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFN-ELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSHPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|345018486|ref|YP_004820839.1| exodeoxyribonuclease III Xth [Thermoanaerobacter wiegelii Rt8.B1]
gi|344033829|gb|AEM79555.1| exodeoxyribonuclease III Xth [Thermoanaerobacter wiegelii Rt8.B1]
Length = 257
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 123/178 (69%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSV YG+GI HD+EGR++T E++ F+L++ Y PNS GL RLSYR+ EW+ +Y+
Sbjct: 75 KPLSVNYGIGIPQHDNEGRVITLEYEKFYLVNTYTPNSQRGLTRLSYRM-EWEEDFRNYL 133
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+ KP+IL GDLN AH+EIDI NP+ NRR+AGFTDEER+ L+ GF+DTFR
Sbjct: 134 LKLDSVKPIILCGDLNVAHKEIDIKNPSANRRNAGFTDEEREKMTM-LLNSGFIDTFRYF 192
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ YT+W Y R+ N GWR+DYF+VSQ L D D+ I DV GSDH P+ L
Sbjct: 193 YPHKKDAYTWWSYMRNAREKNIGWRIDYFIVSQRLKDYLIDAEIHSDVMGSDHCPVVL 250
>gi|254302413|ref|ZP_04969771.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148322605|gb|EDK87855.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 253
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLGI +HD EGR++T EF+ F++++ Y PNS D L RL YR+ W+ Y+
Sbjct: 72 EPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYRMV-WEDEFRKYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEKKKPV++ GDLN AH+EID+ NP NRR+AGFTDEER F L GF+DTFR
Sbjct: 131 KNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKF-TELLDSGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR R+ N GWR+DYF+VS+ L D+ I + GSDH P+ L L
Sbjct: 190 YPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEIHSQIEGSDHCPVVLFL 249
Query: 181 KL 182
L
Sbjct: 250 DL 251
>gi|289766441|ref|ZP_06525819.1| exodeoxyribonuclease III [Fusobacterium sp. D11]
gi|289717996|gb|EFD82008.1| exodeoxyribonuclease III [Fusobacterium sp. D11]
Length = 253
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLGI +HD EGR++T EF+ F++++ Y PNS D L RL YR+ W+ Y+
Sbjct: 72 EPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYRMI-WEDEFRKYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEKKKPV++ GDLN AH+EID+ NP NRR+AGFTDEER F L GF+DTFR
Sbjct: 131 KNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKF-TELLDSGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR R+ N GWR+DYF+VS+ L D+ I + GSDH P+ L L
Sbjct: 190 YPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEIHTQIEGSDHCPVVLFL 249
Query: 181 KL 182
L
Sbjct: 250 NL 251
>gi|385219782|ref|YP_005781257.1| exodeoxyribonuclease III [Helicobacter pylori Gambia94/24]
gi|317014940|gb|ADU82376.1| exodeoxyribonuclease III [Helicobacter pylori Gambia94/24]
Length = 250
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RLSYR+ W+ ++
Sbjct: 72 EPLSVSYGIDIKEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMN-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNVGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|386753431|ref|YP_006226650.1| exodeoxyribonuclease III [Helicobacter pylori Shi169]
gi|386754997|ref|YP_006228215.1| exodeoxyribonuclease III [Helicobacter pylori Shi112]
gi|384559689|gb|AFI00157.1| exodeoxyribonuclease III [Helicobacter pylori Shi169]
gi|384561255|gb|AFI01722.1| exodeoxyribonuclease III [Helicobacter pylori Shi112]
Length = 250
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ YVPNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVVTCEFESFYLVNVYVPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|352683918|ref|YP_004895902.1| exodeoxyribonuclease III [Acidaminococcus intestini RyC-MR95]
gi|350278572|gb|AEQ21762.1| exodeoxyribonuclease III [Acidaminococcus intestini RyC-MR95]
Length = 258
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/179 (51%), Positives = 125/179 (69%), Gaps = 3/179 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPLSVTYGLGI +HD EGR++TAE+D F+L++ Y PNS L RLSYR+ W+ + +Y
Sbjct: 78 IKPLSVTYGLGIEEHDQEGRVITAEYDDFYLVNVYTPNSQRELARLSYRMA-WEDAFQAY 136
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++L KKK I+ GD+N AH+ ID+ NP N +AGF+DEERQ A FL++GFVD+FR
Sbjct: 137 CEDLSKKKTTIVCGDMNVAHEPIDLKNPDSNHHNAGFSDEERQKLDA-FLARGFVDSFRM 195
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G YT+W Y R+ N GWR+DYFLVS++ DK D I+ ++ GSDH P+ L
Sbjct: 196 LYPDREGAYTWWSYMFKARERNAGWRIDYFLVSEAGRDKIRDVTIMNEIMGSDHCPVVL 254
>gi|423635487|ref|ZP_17611140.1| exodeoxyribonuclease [Bacillus cereus VD156]
gi|401278238|gb|EJR84174.1| exodeoxyribonuclease [Bacillus cereus VD156]
Length = 252
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 124/178 (69%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGL I +HD EGRL+T EF+ F++++ Y PNS GL RL YR+ +W+ SY+
Sbjct: 73 EPLSVTYGLDIEEHDQEGRLITLEFEDFYMITLYTPNSKRGLERLDYRM-KWEDDFRSYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+EID+ NP NR++ GF+DEER+ F L +GF+DT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFSC-ILEEGFIDTYRYL 190
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ Y++W YR G R N GWRLDYF+VS+ + D+ ++ I +V GSDH P+ L
Sbjct: 191 YPDQEDAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEVMGSDHCPVEL 248
>gi|227498619|ref|ZP_03928763.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|226904075|gb|EEH89993.1| conserved hypothetical protein [Acidaminococcus sp. D21]
Length = 251
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/179 (51%), Positives = 125/179 (69%), Gaps = 3/179 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPLSVTYGLGI +HD EGR++TAE+D F+L++ Y PNS L RLSYR+ W+ + +Y
Sbjct: 71 IKPLSVTYGLGIEEHDQEGRVITAEYDDFYLVNVYTPNSQRELARLSYRMA-WEDAFQAY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++L KKK I+ GD+N AH+ ID+ NP N +AGF+DEERQ A FL++GFVD+FR
Sbjct: 130 CEDLSKKKTTIVCGDMNVAHEPIDLKNPDSNHHNAGFSDEERQKLDA-FLARGFVDSFRM 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G YT+W Y R+ N GWR+DYFLVS++ DK D I+ ++ GSDH P+ L
Sbjct: 189 LYPDREGAYTWWSYMFKARERNAGWRIDYFLVSEAGRDKIRDVTIMNEIMGSDHCPVVL 247
>gi|228922454|ref|ZP_04085756.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|423581952|ref|ZP_17558063.1| exodeoxyribonuclease [Bacillus cereus VD014]
gi|228837168|gb|EEM82507.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|401212831|gb|EJR19572.1| exodeoxyribonuclease [Bacillus cereus VD014]
Length = 252
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 124/178 (69%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGL I +HD EGRL+T EF+ F++++ Y PNS GL RL YR+ +W+ SY+
Sbjct: 73 EPLSVTYGLDIEEHDQEGRLITLEFEDFYMITLYTPNSKRGLERLDYRM-KWEDDFRSYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+EID+ NP NR++ GF+DEER+ F L +GF+DT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFSC-ILEEGFIDTYRYL 190
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ Y++W YR G R N GWRLDYF+VS+ + D+ ++ I +V GSDH P+ L
Sbjct: 191 YPDQEDAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINTEVMGSDHCPVEL 248
>gi|269123555|ref|YP_003306132.1| exodeoxyribonuclease III Xth [Streptobacillus moniliformis DSM
12112]
gi|268314881|gb|ACZ01255.1| exodeoxyribonuclease III Xth [Streptobacillus moniliformis DSM
12112]
Length = 251
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 124/181 (68%), Gaps = 3/181 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++P+SV+YG+GI +HD EGR++TAEF+ ++ ++ Y PNS + L RL YR+ W+ SY
Sbjct: 72 VEPISVSYGIGIEEHDKEGRVITAEFEDYYFVTVYTPNSKNELERLDYRMI-WEDEFRSY 130
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K+LE+KKPVI+ GDLN AH+EID+ NP N RSAGFT EER F + GF+DTFR
Sbjct: 131 LKKLEEKKPVIVCGDLNVAHKEIDLKNPKSNTRSAGFTIEERNKF-TELIENGFIDTFRY 189
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + Y++W YR RK N GWR+DYF VS SL D+ D+ I V GSDH P+ L
Sbjct: 190 FYPDKIHAYSWWSYRGNARKNNTGWRIDYFCVSSSLKDRLVDAEIHDKVEGSDHCPVVLY 249
Query: 180 L 180
+
Sbjct: 250 I 250
>gi|385229195|ref|YP_005789128.1| exodeoxyribonuclease III [Helicobacter pylori Puno120]
gi|344335633|gb|AEN16077.1| exodeoxyribonuclease III [Helicobacter pylori Puno120]
Length = 250
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ YVPNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRIITCEFESFYLVNVYVPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|308183626|ref|YP_003927753.1| exodeoxyribonuclease III [Helicobacter pylori PeCan4]
gi|384893489|ref|YP_005767582.1| exodeoxyribonuclease III [Helicobacter pylori Cuz20]
gi|308062786|gb|ADO04674.1| exodeoxyribonuclease III [Helicobacter pylori Cuz20]
gi|308065811|gb|ADO07703.1| exodeoxyribonuclease III [Helicobacter pylori PeCan4]
Length = 250
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ YVPNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVVTCEFESFYLVNVYVPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|326390442|ref|ZP_08212000.1| exodeoxyribonuclease III Xth [Thermoanaerobacter ethanolicus JW
200]
gi|392939538|ref|ZP_10305182.1| exodeoxyribonuclease III [Thermoanaerobacter siderophilus SR4]
gi|325993560|gb|EGD51994.1| exodeoxyribonuclease III Xth [Thermoanaerobacter ethanolicus JW
200]
gi|392291288|gb|EIV99731.1| exodeoxyribonuclease III [Thermoanaerobacter siderophilus SR4]
Length = 257
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 123/178 (69%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSV YG+GI HD+EGR++T E++ F+L++ Y PNS GL RLSYR+ EW+ +Y+
Sbjct: 75 KPLSVNYGIGIPQHDNEGRVITLEYEKFYLVNTYTPNSQRGLTRLSYRM-EWEEDFRNYL 133
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+ KP+IL GDLN AH+EIDI NP+ NRR+AGFTDEER+ L+ GF+DTFR
Sbjct: 134 LKLDSVKPIILCGDLNVAHKEIDIKNPSANRRNAGFTDEEREKMTM-LLNSGFIDTFRYF 192
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ YT+W Y R+ N GWR+DYF+VSQ L D D+ I DV GSDH P+ L
Sbjct: 193 YPHKKDAYTWWSYMRNAREKNIGWRIDYFIVSQRLKDYLIDAEIHSDVMGSDHCPVVL 250
>gi|15646134|ref|NP_208316.1| exodeoxyribonuclease III [Helicobacter pylori 26695]
gi|410024766|ref|YP_006894019.1| exodeoxyribonuclease III [Helicobacter pylori Rif1]
gi|410502530|ref|YP_006937057.1| exodeoxyribonuclease III [Helicobacter pylori Rif2]
gi|410683049|ref|YP_006935451.1| exodeoxyribonuclease III [Helicobacter pylori 26695]
gi|419417169|ref|ZP_13957646.1| exodeoxyribonuclease III [Helicobacter pylori P79]
gi|2314703|gb|AAD08563.1| exodeoxyribonuclease (lexA) [Helicobacter pylori 26695]
gi|384373631|gb|EIE29102.1| exodeoxyribonuclease III [Helicobacter pylori P79]
gi|409894690|gb|AFV42748.1| exodeoxyribonuclease III [Helicobacter pylori 26695]
gi|409896423|gb|AFV44345.1| exodeoxyribonuclease III [Helicobacter pylori Rif1]
gi|409898081|gb|AFV45935.1| exodeoxyribonuclease III [Helicobacter pylori Rif2]
Length = 250
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|291519655|emb|CBK74876.1| exodeoxyribonuclease III [Butyrivibrio fibrisolvens 16/4]
Length = 250
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 124/178 (69%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV+YG+GI +HD EGR++T EF+ F+ ++CY PNS + L+RL YR+T W+ +Y+
Sbjct: 72 EPISVSYGIGIEEHDHEGRVITLEFEDFYFITCYTPNSQNELKRLDYRMT-WEDDFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
++L +KK VIL GDLN AH+EIDI NP NR +AGFTDEER LS GFVD+FR
Sbjct: 131 QKLNEKKGVILCGDLNVAHEEIDIKNPKTNRHNAGFTDEERAKM-TELLSAGFVDSFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ Y++W YR R+ N GWR+DYF+VS+ + D+ DS I DV GSDH PI L
Sbjct: 190 YPDQTDIYSWWSYRFKAREKNAGWRIDYFIVSEDIKDRMKDSKIHTDVMGSDHCPIEL 247
>gi|385216679|ref|YP_005776636.1| exodeoxyribonuclease [Helicobacter pylori F32]
gi|317181208|dbj|BAJ58994.1| exodeoxyribonuclease [Helicobacter pylori F32]
Length = 250
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|386747928|ref|YP_006221136.1| exodeoxyribonuclease III [Helicobacter cetorum MIT 99-5656]
gi|384554170|gb|AFI05926.1| exodeoxyribonuclease III [Helicobacter cetorum MIT 99-5656]
Length = 250
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 124/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V+YG+GI +HD+EGR+VT EFD F+L++ Y PNS L RL YR++ W+ ++
Sbjct: 72 EPLNVSYGIGIEEHDTEGRVVTCEFDKFYLVNVYTPNSQRALARLEYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE +KPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KNLELQKPVIVCGDLNVAHNEIDLENPKANRKNAGFSDEEREKF-SELLNAGFIDTFRHF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S+SL + D+ I ++ GSDH P+GL L
Sbjct: 190 YPTKEKAYTWWSYMQQARDKNIGWRIDYFLCSKSLKTELKDAKIYENILGSDHCPVGLEL 249
>gi|385267001|ref|ZP_10045088.1| ExoA [Bacillus sp. 5B6]
gi|385151497|gb|EIF15434.1| ExoA [Bacillus sp. 5B6]
Length = 252
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 127/182 (69%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL V YGLGI DHD EGR++T EF++ F+++CY PN+ GL R+ YR+ +W+ Y+
Sbjct: 73 KPLHVFYGLGIDDHDQEGRVITLEFENVFVVNCYTPNAKRGLERIDYRL-QWEADFKDYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
++L++KKPVIL GDLN AH+EID+ NP NR++AGF+++ER++F A L+ GF DTFR
Sbjct: 132 QKLDRKKPVILCGDLNVAHREIDLKNPKANRKNAGFSEQEREAFSA-LLNAGFTDTFRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWRLDY +VS L + + + I D+ GSDH P+ + +
Sbjct: 191 YPDREGAYSWWSYRTNAREKNIGWRLDYVIVSDRLKPRINQAAICADIMGSDHCPVEMTV 250
Query: 181 KL 182
L
Sbjct: 251 DL 252
>gi|229157316|ref|ZP_04285394.1| Exodeoxyribonuclease [Bacillus cereus ATCC 4342]
gi|228626043|gb|EEK82792.1| Exodeoxyribonuclease [Bacillus cereus ATCC 4342]
Length = 252
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGR++T EF+ F++++ Y PNS GL RL YR+ +W+ Y+
Sbjct: 73 EPLSVTYGLGIEEHDQEGRVITLEFEDFYIITLYTPNSKRGLERLDYRM-KWEDDFRVYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPV+ GDLN AH+EID+ NP NR++ GF+DEER+ F L +GF+DT+R
Sbjct: 132 KRLDEKKPVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTC-ILEEGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + D+ ++ I +V GSDH P+ L
Sbjct: 191 YPNQEGAYSWWSYRMGARVKNIGWRLDYFVVSERMKDQITEAKINSEVMGSDHCPVEL 248
>gi|217034282|ref|ZP_03439699.1| hypothetical protein HP9810_885g13 [Helicobacter pylori 98-10]
gi|216943254|gb|EEC22719.1| hypothetical protein HP9810_885g13 [Helicobacter pylori 98-10]
Length = 250
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420145437|ref|ZP_14652903.1| Exodeoxyribonuclease III [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398402932|gb|EJN56217.1| Exodeoxyribonuclease III [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 254
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 122/181 (67%), Gaps = 2/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYG+G+++HD EGRL+T E+ F+LL+CY PNS L+RL YR++ W+ + SY+
Sbjct: 72 EPLNVTYGMGVAEHDQEGRLITLEYKDFYLLTCYTPNSQTKLKRLDYRMS-WEDAFRSYI 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L +KKPVI GDLN AH+ ID+ N N +AGF+DEER F + L+ GF D+FR
Sbjct: 131 STLNQKKPVIFCGDLNVAHEPIDLKNDKTNHHNAGFSDEERAKF-SQLLAAGFTDSFRYF 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R+ N GWR+DYF+ + L + D+ IL DV GSDH P+ L K
Sbjct: 190 YPDQVTYSWWSYRFNARQNNAGWRIDYFVTADQLQPQLADAAILTDVLGSDHCPVMLTTK 249
Query: 182 L 182
L
Sbjct: 250 L 250
>gi|260808574|ref|XP_002599082.1| hypothetical protein BRAFLDRAFT_225146 [Branchiostoma floridae]
gi|229284358|gb|EEN55094.1| hypothetical protein BRAFLDRAFT_225146 [Branchiostoma floridae]
Length = 272
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/183 (50%), Positives = 129/183 (70%), Gaps = 4/183 (2%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP+ VTYG+G+ +HD EGR++TAEFD F++++ YVPN+G GL RL YR T WD + ++Y+
Sbjct: 90 KPIKVTYGIGVDEHDDEGRVITAEFDDFYMVTAYVPNAGRGLVRLDYRGT-WDEAFTAYL 148
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNR-RSAGFTDEERQSFGANFLSKGFVDTFRA 120
K+L+KKKPV+L GDLN AH EID+ NP GN+ ++ GFTD+ER+ F L +GF D++R
Sbjct: 149 KKLDKKKPVVLCGDLNVAHNEIDLKNPKGNKNKTPGFTDKEREGF-TTLLDEGFKDSYRE 207
Query: 121 QH-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ YT+W Y G R N GWRLDYF++S L + D+ I +V GSDH PI L+
Sbjct: 208 LYPEETDCYTFWSYMGGARAKNVGWRLDYFVLSDRLMPQLCDNVIRSEVMGSDHCPIVLL 267
Query: 180 LKL 182
L +
Sbjct: 268 LAM 270
>gi|423669305|ref|ZP_17644334.1| exodeoxyribonuclease [Bacillus cereus VDM034]
gi|423674566|ref|ZP_17649505.1| exodeoxyribonuclease [Bacillus cereus VDM062]
gi|401298432|gb|EJS04032.1| exodeoxyribonuclease [Bacillus cereus VDM034]
gi|401310117|gb|EJS15450.1| exodeoxyribonuclease [Bacillus cereus VDM062]
Length = 252
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 123/178 (69%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SVTYGLGI +HD EGR++T EFD F++++ Y PNS GL RL YR+ EW+ +Y+
Sbjct: 73 EPISVTYGLGIEEHDQEGRVITLEFDDFYMITLYTPNSKRGLERLDYRM-EWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+E+D+ NP NR++ GF+DEER+ F L GF+DT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEVDLKNPKSNRKNPGFSDEEREKFTC-VLEAGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR R N GWRLDYF++S+ L K D+ I +V GSDH P+ L
Sbjct: 191 YPDQEGAYSWWSYRMDARAKNIGWRLDYFVISERLKHKITDAKINSEVMGSDHCPVEL 248
>gi|420442874|ref|ZP_14941805.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-36]
gi|393056819|gb|EJB57729.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-36]
Length = 250
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEMEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|260495692|ref|ZP_05815815.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_33]
gi|260196757|gb|EEW94281.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_33]
Length = 253
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLGI +HD EGR++T EF+ F++++ Y PNS D L RL YR+ W+ Y+
Sbjct: 72 EPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYRMV-WEDEFRKYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEKKKPV+ GDLN AH+EID+ NP NRR+AGFTDEER F L GF+DTFR
Sbjct: 131 KNLEKKKPVVACGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKF-TELLDSGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR R+ N GWR+DYF+VS+ L D+ I + GSDH P+ L L
Sbjct: 190 YPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEIHTQIEGSDHCPVVLFL 249
Query: 181 KL 182
L
Sbjct: 250 NL 251
>gi|386748979|ref|YP_006222186.1| exodeoxyribonuclease III [Helicobacter cetorum MIT 00-7128]
gi|384555222|gb|AFI03556.1| exodeoxyribonuclease III [Helicobacter cetorum MIT 00-7128]
Length = 250
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 123/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+V+YG+GI +HD+EGR++T EFD F+L++ Y PNS L RL YR++ W+ ++
Sbjct: 72 KPLNVSYGIGIEEHDTEGRVITCEFDKFYLVNVYTPNSQRALARLEYRMS-WEIEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKANRKNAGFSDEEREKF-SELLNAGFIDTFRHF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R+ N GWR+DYFL S SL + D+ I + GSDH P+GL L
Sbjct: 190 YPTKEKAYTWWSYMQQSRERNIGWRIDYFLCSNSLKIEIKDAKIYESILGSDHCPVGLEL 249
>gi|225569150|ref|ZP_03778175.1| hypothetical protein CLOHYLEM_05230 [Clostridium hylemonae DSM
15053]
gi|225161949|gb|EEG74568.1| hypothetical protein CLOHYLEM_05230 [Clostridium hylemonae DSM
15053]
Length = 250
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 125/180 (69%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLS T G+GI +HD EGR++T EF+ F+ ++ Y PNS L RLSYR+ EW+ + +Y+
Sbjct: 72 EPLSFTCGIGIEEHDKEGRVITLEFEEFYFVTVYTPNSQSELARLSYRM-EWEDAFLAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE+KKPVI GDLN A +EID+ NP NR++AGFTDEER+ F + GFVDTFR
Sbjct: 131 KKLEEKKPVIFCGDLNVAAEEIDLKNPKTNRKNAGFTDEEREKF-RKIKASGFVDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWR+DYF VSQSL ++ D+ I DV GSDH P+ L L
Sbjct: 190 YPDEEGIYSWWSYRFRAREKNAGWRIDYFCVSQSLKERLEDARIHTDVMGSDHCPVELDL 249
>gi|154497021|ref|ZP_02035717.1| hypothetical protein BACCAP_01314 [Bacteroides capillosus ATCC
29799]
gi|150273420|gb|EDN00548.1| hypothetical protein BACCAP_01314 [Pseudoflavonifractor capillosus
ATCC 29799]
Length = 250
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/179 (51%), Positives = 125/179 (69%), Gaps = 3/179 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++PL+VTYG+G +HD EGR +T EF+ F+L++CYVPN+ L RL +R+ EW+ +L +Y
Sbjct: 71 LEPLNVTYGIGSEEHDREGRAITLEFEDFYLVNCYVPNAQRELTRLDWRM-EWEDALRAY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ EL+ +KPVI GDLN AHQEID+ N NR +AGFTDEER L GFVD+FR
Sbjct: 130 LLELDSRKPVIYCGDLNVAHQEIDLKNAKSNRGNAGFTDEERAKM-TQLLEAGFVDSFRH 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W Y R+ N GWR+DYFLVS+S+ADK DS I P++ GSDH P+ L
Sbjct: 189 LYPDKTGAYSWWSYMFHAREKNAGWRIDYFLVSKSIADKIGDSIIHPEIMGSDHCPVEL 247
>gi|336420229|ref|ZP_08600467.1| exodeoxyribonuclease III [Fusobacterium sp. 11_3_2]
gi|336161634|gb|EGN64634.1| exodeoxyribonuclease III [Fusobacterium sp. 11_3_2]
Length = 253
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLGI +HD EGR++T EF+ F++++ Y PNS D L RL YR+ W+ Y+
Sbjct: 72 EPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYRMI-WEDEFRKYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEKKKPV++ GDLN AH+EID+ NP NRR+AGFTDEER F L GF+DTFR
Sbjct: 131 KNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKF-TELLDSGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR R+ N GWR+DYF+VS+ L D+ I + GSDH P+ L L
Sbjct: 190 YPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEIHTQIEGSDHCPVVLFL 249
Query: 181 KL 182
L
Sbjct: 250 DL 251
>gi|420410840|ref|ZP_14909976.1| exodeoxyribonuclease III [Helicobacter pylori NQ4200]
gi|393026053|gb|EJB27153.1| exodeoxyribonuclease III [Helicobacter pylori NQ4200]
Length = 250
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|421719100|ref|ZP_16158390.1| exodeoxyribonuclease III [Helicobacter pylori R038b]
gi|407218577|gb|EKE88401.1| exodeoxyribonuclease III [Helicobacter pylori R038b]
Length = 250
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|19703399|ref|NP_602961.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|296328758|ref|ZP_06871272.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|19713467|gb|AAL94260.1| Exodeoxyribonuclease III [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|296154093|gb|EFG94897.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 253
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLGI +HD EGR++T EF+ F++++ Y PNS D L RL YR+ W+ Y+
Sbjct: 72 EPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYRMV-WEDEFRKYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEKKKPV++ GDLN AH+EID+ NP NRR+AGFTDEER F L GF+DTFR
Sbjct: 131 KNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKF-TELLDSGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR R+ N GWR+DYF+VS+ L D+ I + GSDH P+ L L
Sbjct: 190 YPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKSLVDAEIHSQIEGSDHCPVVLFL 249
Query: 181 KL 182
+
Sbjct: 250 EF 251
>gi|89897437|ref|YP_520924.1| hypothetical protein DSY4691 [Desulfitobacterium hafniense Y51]
gi|219670588|ref|YP_002461023.1| exodeoxyribonuclease III [Desulfitobacterium hafniense DCB-2]
gi|89336885|dbj|BAE86480.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219540848|gb|ACL22587.1| exodeoxyribonuclease III Xth [Desulfitobacterium hafniense DCB-2]
Length = 250
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 118/178 (66%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+G +HD EGR++T EFD+F+L++ Y PNS L RL YR+ W+ Y+
Sbjct: 72 EPLSVSYGIGQEEHDQEGRVITLEFDTFYLVTVYTPNSQRDLARLDYRMI-WEAEFLGYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA- 120
K LEK KPVIL GDLN AH EID+ NP NR++AGFTDEER F + L GF+DTFR
Sbjct: 131 KNLEKSKPVILCGDLNVAHTEIDLKNPKTNRKNAGFTDEERAKF-SELLKNGFIDTFRHF 189
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
YT+W Y R N GWR+DYF VS+SL ++ D+ I + GSDH P+GL
Sbjct: 190 NPDKKEAYTWWSYMFNARANNAGWRIDYFCVSESLKNELKDAMIYDQIMGSDHCPVGL 247
>gi|423076274|ref|ZP_17064987.1| exodeoxyribonuclease III [Desulfitobacterium hafniense DP7]
gi|361852634|gb|EHL04857.1| exodeoxyribonuclease III [Desulfitobacterium hafniense DP7]
Length = 250
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 118/178 (66%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+G +HD EGR++T EFD+F+L++ Y PNS L RL YR+ W+ Y+
Sbjct: 72 EPLSVSYGIGQEEHDQEGRVITLEFDTFYLVTVYTPNSQRDLARLDYRMI-WEAEFLGYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA- 120
K LEK KPVIL GDLN AH EID+ NP NR++AGFTDEER F + L GF+DTFR
Sbjct: 131 KNLEKSKPVILCGDLNVAHTEIDLKNPKTNRKNAGFTDEERAKF-SELLKNGFIDTFRHF 189
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
YT+W Y R N GWR+DYF VS+SL ++ D+ I + GSDH P+GL
Sbjct: 190 NPDKKEAYTWWSYMFNARANNAGWRIDYFCVSESLKNELKDAMIYDQIMGSDHCPVGL 247
>gi|423401446|ref|ZP_17378619.1| exodeoxyribonuclease [Bacillus cereus BAG2X1-2]
gi|401654436|gb|EJS71979.1| exodeoxyribonuclease [Bacillus cereus BAG2X1-2]
Length = 252
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 126/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGR++T EF+ F++++ Y PNS GL RL YR+ +W+ +Y+
Sbjct: 73 EPLSVTYGLGIEEHDQEGRVITLEFEDFYMITLYTPNSKRGLERLDYRM-KWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPV+ GDLN AH+EID+ NP NR++ GF+DEER+ F L +GF+DT+R
Sbjct: 132 KRLDEKKPVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKF-TRILEEGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + ++ ++ I +V GSDH P+ L
Sbjct: 191 YPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKNQITEAEINSEVMGSDHCPVEL 248
>gi|429507371|ref|YP_007188555.1| ExoA protein [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
gi|429488961|gb|AFZ92885.1| ExoA [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
Length = 252
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 125/182 (68%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL V YGLGI DHD EGR++T EF+ F+++CY PN+ GL R+ YR+ +W+ Y+
Sbjct: 73 KPLHVFYGLGIDDHDQEGRVITLEFEHVFVVNCYTPNAKRGLERIDYRL-QWEADFKDYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
++L++KKPVIL GDLN AH+EID+ NP NR++AGF+++ER++F A L+ GF D+FR
Sbjct: 132 QKLDRKKPVILCGDLNVAHREIDLKNPKANRKNAGFSEQEREAFSA-LLNAGFTDSFRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWRLDY +VS L + + I D+ GSDH P+ + L
Sbjct: 191 YPDQEGAYSWWSYRTNAREKNIGWRLDYVIVSDRLKQRISQAAICADIMGSDHCPVEMTL 250
Query: 181 KL 182
L
Sbjct: 251 DL 252
>gi|383754456|ref|YP_005433359.1| putative exodeoxyribonuclease III [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381366508|dbj|BAL83336.1| putative exodeoxyribonuclease III [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 250
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I+PL VTYGLGI +HD EGR++T EF FL++ Y PNS L RL+YR+ EW+ + +Y
Sbjct: 71 IEPLHVTYGLGIEEHDHEGRVITLEFPEMFLVTVYTPNSKRELERLAYRM-EWEDAFRAY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ +L+++KPVI+ GDLN AHQEID+ NP N +AGFTDEER FG L GF+DTFR
Sbjct: 130 LMKLDEQKPVIVCGDLNVAHQEIDLKNPKTNHHNAGFTDEERGKFG-ELLDAGFIDTFRT 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G YT+W Y R N GWR+DYF+ S+ L +K D+ I ++ GSDH P+GL
Sbjct: 189 LYPDRTGIYTWWSYLRKARDNNAGWRIDYFVASKRLQEKIQDATIHNEIFGSDHCPVGLE 248
Query: 180 LK 181
L+
Sbjct: 249 LE 250
>gi|229191862|ref|ZP_04318833.1| Exodeoxyribonuclease [Bacillus cereus ATCC 10876]
gi|228591624|gb|EEK49472.1| Exodeoxyribonuclease [Bacillus cereus ATCC 10876]
Length = 252
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 123/178 (69%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGL I +HD EGRL+T EF+ F++++ Y PNS GL RL YR+ +W+ SY+
Sbjct: 73 EPLSVTYGLDIEEHDQEGRLITLEFEDFYMITLYTPNSKRGLERLDYRM-KWEDDFRSYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+EID+ NP NR++ GF+DEER+ F L +GF DT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFSC-ILEEGFTDTYRYL 190
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ Y++W YR G R N GWRLDYF+VS+ + D+ ++ I +V GSDH P+ L
Sbjct: 191 YPDQESAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAKINSEVMGSDHCPVEL 248
>gi|410918464|ref|XP_003972705.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like [Takifugu
rubripes]
Length = 314
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 121/178 (67%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+ VTYG+G +HD EGR++TAEF SFFL++ YVPNSG GL RL YR T WD +Y+
Sbjct: 135 EPIKVTYGIGKEEHDKEGRVITAEFSSFFLVTVYVPNSGRGLVRLDYRKT-WDVDFRTYL 193
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL+ +KPV+L GDLN AHQEID+ NP GN+++AGFT EER+ F + L GFVD+FR
Sbjct: 194 SELDIQKPVVLCGDLNVAHQEIDLKNPKGNKKNAGFTAEEREGF-SQLLEAGFVDSFREL 252
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ Y++W Y R N GWRLDYF++S SL DS I V GSDH PI L
Sbjct: 253 YPEQTHAYSFWTYMMNARDKNVGWRLDYFVLSSSLLPALCDSKIRNQVRGSDHCPITL 310
>gi|421720757|ref|ZP_16160034.1| exodeoxyribonuclease III [Helicobacter pylori R055a]
gi|407225541|gb|EKE95311.1| exodeoxyribonuclease III [Helicobacter pylori R055a]
Length = 250
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|108563814|ref|YP_628130.1| exodeoxyribonuclease III [Helicobacter pylori HPAG1]
gi|107837587|gb|ABF85456.1| exodeoxyribonuclease [Helicobacter pylori HPAG1]
Length = 250
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|423418359|ref|ZP_17395448.1| exodeoxyribonuclease [Bacillus cereus BAG3X2-1]
gi|401106632|gb|EJQ14593.1| exodeoxyribonuclease [Bacillus cereus BAG3X2-1]
Length = 252
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 123/178 (69%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGR++T EF+ F +++ Y PNS GL RL YR+ +W+ +Y+
Sbjct: 73 EPLSVTYGLGIEEHDQEGRVITLEFEDFHMITLYTPNSKRGLERLDYRM-KWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L+KKKPVI GDLN +H+EID+ NP NR++ GF+DEER+ F L +GFVDT+R
Sbjct: 132 KRLDKKKPVIFCGDLNVSHKEIDLKNPKSNRKNPGFSDEEREKF-TKILEEGFVDTYRFL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+ S+ L K D+ I ++ GSDH P+ L
Sbjct: 191 YPEQEGAYSWWSYRMGARAKNIGWRLDYFVTSERLKHKITDAKINSEIMGSDHCPVEL 248
>gi|423137872|ref|ZP_17125515.1| exodeoxyribonuclease III (xth) [Fusobacterium nucleatum subsp.
animalis F0419]
gi|371959030|gb|EHO76727.1| exodeoxyribonuclease III (xth) [Fusobacterium nucleatum subsp.
animalis F0419]
Length = 253
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLGI +HD EGR++T EF+ F++++ Y PNS D L RL YR+ W+ Y+
Sbjct: 72 EPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYRMV-WEDEFRKYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LEKKKPV+ GDLN AH+EID+ NP NRR+AGFTDEER F L GF+DTFR
Sbjct: 131 KNLEKKKPVVACGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKF-TELLDSGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR R+ N GWR+DYF+VS+ L D+ I + GSDH P+ L L
Sbjct: 190 YPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEIHTQIEGSDHCPVVLFL 249
Query: 181 KL 182
L
Sbjct: 250 DL 251
>gi|336392108|ref|ZP_08573507.1| exodeoxyribonuclease III [Lactobacillus coryniformis subsp.
torquens KCTC 3535]
Length = 257
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 121/180 (67%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYG+G+++HD EGRL+T E+ F+LL+CY PNS L+RL YR++ W+ + SY+
Sbjct: 75 EPLNVTYGMGVAEHDQEGRLITLEYKDFYLLTCYTPNSQTKLKRLDYRMS-WEDAFRSYI 133
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L +KKPVI GDLN AH+ ID+ N N +AGF+DEER F + LS GF D+FR
Sbjct: 134 STLNQKKPVIFCGDLNVAHEPIDLKNDKTNHHNAGFSDEERAKF-SQLLSAGFTDSFRYF 192
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R+ N GWR+DYF+ + L + D+ IL DV GSDH P+ L K
Sbjct: 193 YPDQVTYSWWSYRFNARQNNAGWRIDYFVTADQLQPQLADAAILTDVLGSDHCPVMLTTK 252
>gi|419419212|ref|ZP_13959471.1| exodeoxyribonuclease III [Helicobacter pylori NCTC 11637 = CCUG
17874]
gi|384372800|gb|EIE28363.1| exodeoxyribonuclease III [Helicobacter pylori NCTC 11637 = CCUG
17874]
Length = 250
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKF-SELLNDGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|421712646|ref|ZP_16151978.1| exodeoxyribonuclease III [Helicobacter pylori R32b]
gi|407217447|gb|EKE87280.1| exodeoxyribonuclease III [Helicobacter pylori R32b]
Length = 250
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKF-SELLNTGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|386756397|ref|YP_006229614.1| exodeoxyribonuclease III [Helicobacter pylori PeCan18]
gi|384562655|gb|AFI03121.1| exodeoxyribonuclease III [Helicobacter pylori PeCan18]
Length = 250
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEMEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|967268|gb|AAC47024.1| class II apurinic/apyrimidinic(AP)-endonuclease [Dictyostelium
discoideum]
Length = 361
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/184 (51%), Positives = 130/184 (70%), Gaps = 4/184 (2%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGD-GLRRLSYRITEWDPSLSSY 60
KP ++T+G+GI+ HD+EGR++T E+ F++++ Y+PN+G GL+RL YRI EWD +Y
Sbjct: 178 KPNAITFGIGIAKHDNEGRVITLEYVQFYIVNTYIPNAGTRGLQRLDYRIKEWDVDFQAY 237
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+++L KP+I GDLN AH EID+ NP N++SAGFT EER SF +NFL KG+VD++R
Sbjct: 238 LEKLNATKPIIWCGDLNVAHTEIDLKNPKTNKKSAGFTIEERTSF-SNFLEKGYVDSYRH 296
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDS-YILPDVTGSDHSPIGL 178
+ G G YT+W Y GGR N GWRLDYF+VS+ L D S + V GSDH PIG+
Sbjct: 297 FNPGKEGSYTFWSYLGGGRSKNVGWRLDYFVVSKRLMDSIKISPFHRTSVMGSDHCPIGV 356
Query: 179 ILKL 182
++ L
Sbjct: 357 VVDL 360
>gi|421715896|ref|ZP_16155208.1| exodeoxyribonuclease III [Helicobacter pylori R037c]
gi|407221794|gb|EKE91597.1| exodeoxyribonuclease III [Helicobacter pylori R037c]
Length = 250
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|189460159|ref|ZP_03008944.1| hypothetical protein BACCOP_00795 [Bacteroides coprocola DSM 17136]
gi|189433149|gb|EDV02134.1| exodeoxyribonuclease III [Bacteroides coprocola DSM 17136]
Length = 253
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 126/180 (70%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGR++T E ++F+L++ Y PNS DGL+RL YR+T W+ Y+
Sbjct: 74 QPLSVTYGLGIDEHDHEGRVITLEMENFYLVTVYTPNSQDGLKRLDYRMT-WEEDFRKYL 132
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+++KPV++ GDLN AH+EID+ NP NR +AGFTD+ER+ F L GF+DTFR
Sbjct: 133 LQLDRQKPVLVCGDLNVAHKEIDLKNPKTNRMNAGFTDQEREKFQL-LLDAGFIDTFRHF 191
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W YR R+ N GWR+DYFL S +ADK D+ I ++ GSDH P+ + +
Sbjct: 192 YPTQENIYSWWSYRFKAREKNAGWRIDYFLASSRIADKLQDAKIHTEIFGSDHCPVEVTI 251
>gi|229197850|ref|ZP_04324566.1| Exodeoxyribonuclease [Bacillus cereus m1293]
gi|228585568|gb|EEK43670.1| Exodeoxyribonuclease [Bacillus cereus m1293]
Length = 252
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 124/178 (69%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGR++T EF+ F++++ Y PNS GL RL YR+ +W+ Y+
Sbjct: 73 EPLSVTYGLGIEEHDQEGRVITLEFEDFYIITLYTPNSKRGLERLDYRM-KWEDDFRVYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+EID+ NP NR++ GF+DEER+ F L +GF+DT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTC-ILEEGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + D+ + I +V GSDH P+ L
Sbjct: 191 YPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITAAKINSEVMGSDHCPVEL 248
>gi|296090736|ref|NP_001171688.1| DNA-(apurinic or apyrimidinic site) lyase [Gallus gallus]
gi|194722849|dbj|BAG66138.1| APEX nuclease [Gallus gallus]
Length = 300
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 124/181 (68%), Gaps = 3/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
P+ VT+G+GI +HD+EGR++TAEF S +++S YVPNSG GL RL YR WD + S+++
Sbjct: 122 PIRVTHGIGIEEHDAEGRVLTAEFPSVYVVSAYVPNSGRGLNRLQYR-QRWDGAFKSFLQ 180
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L+ +KPV+L GDLN AH+EID+ NP NRRS GFT EER +FGA L GF+D+FR +
Sbjct: 181 RLDAQKPVVLCGDLNVAHREIDLRNPKSNRRSPGFTQEERDAFGA-LLDGGFLDSFRLLY 239
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
V YT+W Y G R+ N GWRLDYFL+S L + DS I GSDH PI L L
Sbjct: 240 PDVPNAYTFWTYMGGARERNVGWRLDYFLLSTRLREALCDSKIRSAAMGSDHCPITLYLA 299
Query: 182 L 182
L
Sbjct: 300 L 300
>gi|15612480|ref|NP_224133.1| exodeoxyribonuclease III [Helicobacter pylori J99]
gi|420464550|ref|ZP_14963321.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-4]
gi|4156036|gb|AAD06994.1| EXODEOXYRIBONUCLEASE [Helicobacter pylori J99]
gi|393077779|gb|EJB78526.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-4]
Length = 250
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDIKEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420405856|ref|ZP_14905029.1| exodeoxyribonuclease III [Helicobacter pylori CPY6271]
gi|393021675|gb|EJB22805.1| exodeoxyribonuclease III [Helicobacter pylori CPY6271]
Length = 250
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRMVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|254780031|ref|YP_003058138.1| exodeoxyribonuclease III [Helicobacter pylori B38]
gi|254001944|emb|CAX30201.1| Putative exodeoxyribonuclease [Helicobacter pylori B38]
Length = 250
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420427852|ref|ZP_14926893.1| exodeoxyribonuclease III [Helicobacter pylori Hp A-9]
gi|393040038|gb|EJB41059.1| exodeoxyribonuclease III [Helicobacter pylori Hp A-9]
Length = 248
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 70 EPLSVSYGINIEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFRKFL 128
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 129 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 187
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 188 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 247
>gi|387783040|ref|YP_005793753.1| exodeoxyribonuclease [Helicobacter pylori 51]
gi|261838799|gb|ACX98565.1| exodeoxyribonuclease [Helicobacter pylori 51]
Length = 250
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIDEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|402846244|ref|ZP_10894559.1| exodeoxyribonuclease III [Porphyromonas sp. oral taxon 279 str.
F0450]
gi|402268322|gb|EJU17703.1| exodeoxyribonuclease III [Porphyromonas sp. oral taxon 279 str.
F0450]
Length = 250
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 124/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+GI +HD EGR++T E+ FFL++ Y PNS D LRRL YR+T W+ + SY+
Sbjct: 72 EPLSVSYGIGIEEHDQEGRVITLEYPEFFLVTVYTPNSQDDLRRLDYRMT-WEDAFRSYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L+ KKPVI+ GDLN AH+EID+ NP NRR+AGFTDEER L GF+DTFR
Sbjct: 131 KGLDAKKPVIICGDLNVAHKEIDLKNPKSNRRNAGFTDEERGKL-QELLDAGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W YR R+ N GWR+DYF+ S+ LA + + I ++ GSDH P+ LIL
Sbjct: 190 YPDQADIYSWWSYRFKARERNSGWRIDYFVASERLAPRLQGAAIHTEIYGSDHCPVELIL 249
>gi|386760994|ref|YP_006234629.1| exodeoxyribonuclease LexA [Helicobacter cinaedi PAGU611]
gi|385146010|dbj|BAM11518.1| exodeoxyribonuclease LexA [Helicobacter cinaedi PAGU611]
Length = 251
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/183 (49%), Positives = 124/183 (67%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPL V Y +GIS HD EGR++TAE++ F+L++ Y PN+ L RL YR+ EW+ ++
Sbjct: 71 IKPLQVAYDMGISHHDKEGRIITAEYERFYLVNVYTPNAKRELERLEYRM-EWEDDFRAF 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK+L+K KPV++ GDLN AH+EID+ NP NRR+AGFTDEER + L GF+DTFR
Sbjct: 130 VKKLKKHKPVVICGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKM-SELLESGFIDTFRH 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + G Y++W Y R+ N GWR+DYFL S SL D+ I P + GSDH P+GL
Sbjct: 189 FYPTLEGAYSWWSYMGKARENNTGWRIDYFLCSTSLESHLKDAKIYPHIFGSDHCPVGLS 248
Query: 180 LKL 182
+ +
Sbjct: 249 MDM 251
>gi|420432830|ref|ZP_14931843.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-16]
gi|393046920|gb|EJB47899.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-16]
Length = 236
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 58 EPLSVSYGIDIEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 116
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 117 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 175
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 176 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 235
>gi|385218180|ref|YP_005779656.1| exodeoxyribonuclease [Helicobacter pylori F16]
gi|317178229|dbj|BAJ56018.1| exodeoxyribonuclease [Helicobacter pylori F16]
Length = 250
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +H+ EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHNKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|308185296|ref|YP_003929429.1| exodeoxyribonuclease III [Helicobacter pylori SJM180]
gi|420454456|ref|ZP_14953289.1| exodeoxyribonuclease III [Helicobacter pylori Hp A-8]
gi|308061216|gb|ADO03112.1| exodeoxyribonuclease III [Helicobacter pylori SJM180]
gi|393067777|gb|EJB68584.1| exodeoxyribonuclease III [Helicobacter pylori Hp A-8]
Length = 250
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDIEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|109946643|ref|YP_663871.1| exodeoxyribonuclease III [Helicobacter acinonychis str. Sheeba]
gi|109713864|emb|CAJ98872.1| exodeoxyribonuclease [Helicobacter acinonychis str. Sheeba]
Length = 250
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RL+YR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRIITCEFESFYLVNIYTPNSQQALSRLNYRMS-WEVEFRRFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLNTGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S SL + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNSLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|328870805|gb|EGG19178.1| transcription factor IIIC-gamma subunit [Dictyostelium
fasciculatum]
Length = 1238
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 121/184 (65%), Gaps = 6/184 (3%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSG----DGLRRLSYRITEWDPS 56
IKP+S+T G+GIS HD EGR+VTAEF+ F++++ YVPNSG + L+RL YR EWD
Sbjct: 188 IKPISITSGIGISKHDQEGRVVTAEFEDFYVVNAYVPNSGVDRKEPLKRLGYRTKEWDVD 247
Query: 57 LSSYVKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVD 116
Y+ +L KKPV+ GDLN AH EID+ NP N R+AGFT EER SF + L+ GF+D
Sbjct: 248 FFKYMSDLNTKKPVVWCGDLNVAHTEIDLANPKSNSRTAGFTIEERTSFSGH-LNSGFID 306
Query: 117 TFRAQHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSP 175
T R + G G YT+W Y G R N GWRLDYF+V + S+I V GSDH P
Sbjct: 307 THRHFNPGKTGTYTFWSYMGGARAKNAGWRLDYFIVPATFIGSIAASFIRSKVQGSDHCP 366
Query: 176 IGLI 179
IG+I
Sbjct: 367 IGII 370
>gi|229018928|ref|ZP_04175771.1| Exodeoxyribonuclease [Bacillus cereus AH1273]
gi|229025172|ref|ZP_04181596.1| Exodeoxyribonuclease [Bacillus cereus AH1272]
gi|423390009|ref|ZP_17367235.1| exodeoxyribonuclease [Bacillus cereus BAG1X1-3]
gi|228736105|gb|EEL86676.1| Exodeoxyribonuclease [Bacillus cereus AH1272]
gi|228742371|gb|EEL92528.1| Exodeoxyribonuclease [Bacillus cereus AH1273]
gi|401640925|gb|EJS58651.1| exodeoxyribonuclease [Bacillus cereus BAG1X1-3]
Length = 252
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 123/178 (69%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGR++T EF+ F +++ Y PNS GL RL YR+ +W+ +Y+
Sbjct: 73 EPLSVTYGLGIDEHDQEGRVITLEFEDFHMITLYTPNSKRGLERLDYRM-KWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L+KKKPVI GDLN +H+EID+ NP NR++ GF+DEER+ F L +GFVDT+R
Sbjct: 132 KRLDKKKPVIFCGDLNVSHKEIDLKNPKSNRKNPGFSDEEREKF-TKILEEGFVDTYRFL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+ S+ L K D+ I ++ GSDH P+ L
Sbjct: 191 YPEQEGAYSWWSYRMGARAKNIGWRLDYFVTSERLKHKITDAKINSEIMGSDHCPVEL 248
>gi|294055155|ref|YP_003548813.1| exodeoxyribonuclease III Xth [Coraliomargarita akajimensis DSM
45221]
gi|293614488|gb|ADE54643.1| exodeoxyribonuclease III Xth [Coraliomargarita akajimensis DSM
45221]
Length = 262
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 123/187 (65%), Gaps = 7/187 (3%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDG-----LRRLSYRITEWDP 55
I+P+SV YGLGI HD EGR++TAEF+ ++L++ Y PNS + RRL YR EWD
Sbjct: 76 IEPISVRYGLGIEKHDQEGRVITAEFEDYYLVTVYTPNSQNHDENKRPRRLDYRTLEWDV 135
Query: 56 SLSSYVKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFV 115
+YVK LE KPV+ GDLN AH EID+ NP NR++AGFTDEER F A + GF+
Sbjct: 136 DFLAYVKGLEVTKPVVFCGDLNVAHTEIDLANPKTNRKNAGFTDEERGRFDA-IIEAGFI 194
Query: 116 DTFRAQHRG-VVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHS 174
DTFR + Y++W YR R+ N GWR+DYF VS ++ ++ D+ IL D GSDH
Sbjct: 195 DTFRHLYPDRTEQYSWWSYRAAARQRNIGWRIDYFCVSDAVKNQIRDATILADTLGSDHC 254
Query: 175 PIGLILK 181
P+GL LK
Sbjct: 255 PVGLRLK 261
>gi|340758618|ref|ZP_08695204.1| exodeoxyribonuclease [Fusobacterium varium ATCC 27725]
gi|251835305|gb|EES63846.1| exodeoxyribonuclease [Fusobacterium varium ATCC 27725]
Length = 253
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 125/181 (69%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP+ V+YGLGI +HD EGR++T E++ F++++ Y PNS + L RL YR++ W+ +YV
Sbjct: 72 KPIEVSYGLGIEEHDKEGRVITLEYEDFYMITVYTPNSQEELARLDYRMS-WEDEFRNYV 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+K KPVI+ GDLN AH+EID+ NP NR++AGF+DEER F L GF+D+FR
Sbjct: 131 MKLDKLKPVIICGDLNVAHKEIDLKNPKSNRKNAGFSDEERAKF-TELLENGFIDSFRHF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ V G Y++W YR RK N GWR+DYF+VS+ L D + I ++ GSDH P+ L L
Sbjct: 190 YPEVTGAYSWWSYRFNARKNNAGWRIDYFVVSERLKDIMEGAEIHNEILGSDHCPVVLKL 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|281206753|gb|EFA80938.1| hypothetical protein PPL_06173 [Polysphondylium pallidum PN500]
Length = 2081
Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 95/177 (53%), Positives = 117/177 (66%), Gaps = 6/177 (3%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSG----DGLRRLSYRITEWDPS 56
+KP+SVT G+G+ HD EGR++TAE++ F+L++ YVPNSG L RL YR EWD
Sbjct: 1331 VKPISVTMGMGVGKHDKEGRIITAEYEKFYLVNTYVPNSGVDRKTPLARLDYRTKEWDVD 1390
Query: 57 LSSYVKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVD 116
L Y+ EL KKKPVI TGDLN AH+EID+ NP GN R+AGFT EER SF + FL GFVD
Sbjct: 1391 LFKYMHELNKKKPVIWTGDLNVAHKEIDLKNPKGNVRTAGFTVEERTSF-SGFLESGFVD 1449
Query: 117 TFRA-QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSD 172
TFR + YT+W Y R +N GWRLDYF+V + S+I VTGSD
Sbjct: 1450 TFRHFNPKKEFQYTFWSYMRNSRASNAGWRLDYFIVPLTFIGSVAHSFIRSKVTGSD 1506
>gi|160915303|ref|ZP_02077516.1| hypothetical protein EUBDOL_01312 [Eubacterium dolichum DSM 3991]
gi|158433102|gb|EDP11391.1| exodeoxyribonuclease III [Eubacterium dolichum DSM 3991]
Length = 252
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 126/181 (69%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLGI +HD EGR++T E+D+F+L+ Y PNS DGL RL YR+ +W+ + +Y+
Sbjct: 72 EPLSVSYGLGIDEHDHEGRVITCEYDTFYLVCVYTPNSKDGLLRLDYRM-QWEDAFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+ L++ K V++ GDLN AHQEID+ NP NRR+AGFTDEER+ LS GFVD++R
Sbjct: 131 QRLKESKSVVVCGDLNVAHQEIDLKNPKTNRRNAGFTDEEREKM-TTLLSSGFVDSYRYL 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W YR R+ N GWR+DYFLVS+ ++ ++ I D+ GSDH P+ L
Sbjct: 190 YPDKENVYSWWSYRFSAREKNAGWRIDYFLVSEDAKERIEEAQIHTDIYGSDHCPVSLSF 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|432942682|ref|XP_004083031.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 2
[Oryzias latipes]
Length = 298
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL VTYG+G +HD EGR++TAEF +FFL++ YVPN+ GL RL YR T WD +Y+
Sbjct: 119 EPLKVTYGIGKEEHDKEGRVITAEFPTFFLVTAYVPNASRGLVRLDYRKT-WDVDFQAYL 177
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL+ +KP++L GDLN AHQEID+ NP GN+++AGFT EER+ F + L+ GFVD+FR
Sbjct: 178 TELDVQKPLVLCGDLNVAHQEIDLKNPKGNKKNAGFTPEEREGF-SQLLAAGFVDSFREL 236
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 237 YPEQANAYTFWTYMMNSRAKNVGWRLDYFLLSSSLVPGLCDSKIRNKAMGSDHCPITLHL 296
Query: 181 KL 182
+
Sbjct: 297 AV 298
>gi|420462757|ref|ZP_14961538.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-3]
gi|393078158|gb|EJB78902.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-3]
Length = 250
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420425904|ref|ZP_14924964.1| exodeoxyribonuclease III [Helicobacter pylori Hp A-5]
gi|393040802|gb|EJB41820.1| exodeoxyribonuclease III [Helicobacter pylori Hp A-5]
Length = 250
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDIKEHDKEGRIITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|452857678|ref|YP_007499361.1| apurinic/apyrimidinic endonuclease [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
gi|452081938|emb|CCP23712.1| apurinic/apyrimidinic endonuclease [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
Length = 252
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 126/182 (69%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL V YGLGI DHD EGR++T EF++ F+++CY PN+ GL R+ YR+ +W+ Y+
Sbjct: 73 KPLHVFYGLGIDDHDQEGRVITLEFENVFVVNCYTPNAKRGLERIDYRL-QWEADFKDYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
++L++KKPVIL GDLN AH+EID+ NP NR++AGF+++ER++F A L+ GF D+FR
Sbjct: 132 QKLDRKKPVILCGDLNVAHREIDLKNPKANRKNAGFSEQEREAFSA-LLNAGFTDSFRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWRLDY +VS L + + I D+ GSDH P+ + +
Sbjct: 191 YPDREGAYSWWSYRTNAREKNIGWRLDYVIVSDRLKQRISQAAICADIMGSDHCPVEMTV 250
Query: 181 KL 182
L
Sbjct: 251 DL 252
>gi|154688190|ref|YP_001423351.1| ExoA [Bacillus amyloliquefaciens FZB42]
gi|154354041|gb|ABS76120.1| ExoA [Bacillus amyloliquefaciens FZB42]
Length = 252
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 125/182 (68%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL V YGLGI DHD EGR++T EF+ F+++CY PN+ GL R+ YR+ +W+ Y+
Sbjct: 73 KPLHVLYGLGIDDHDQEGRVITLEFEHVFVVNCYTPNAKRGLERIDYRL-QWEADFKDYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
++L++KKPVIL GDLN AH+EID+ NP NR++AGF+++ER++F A L+ GF D+FR
Sbjct: 132 QKLDRKKPVILCGDLNVAHREIDLKNPKANRKNAGFSEQEREAFSA-LLNAGFTDSFRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWRLDY +VS L + + I D+ GSDH P+ + +
Sbjct: 191 YPDQEGAYSWWSYRTNAREKNIGWRLDYVIVSDRLKQRISQAAICADIMGSDHCPVEMTV 250
Query: 181 KL 182
L
Sbjct: 251 DL 252
>gi|420483017|ref|ZP_14981651.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-2]
gi|393097621|gb|EJB98214.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-2]
Length = 250
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|423395948|ref|ZP_17373149.1| exodeoxyribonuclease [Bacillus cereus BAG2X1-1]
gi|423406828|ref|ZP_17383977.1| exodeoxyribonuclease [Bacillus cereus BAG2X1-3]
gi|401653690|gb|EJS71234.1| exodeoxyribonuclease [Bacillus cereus BAG2X1-1]
gi|401660118|gb|EJS77601.1| exodeoxyribonuclease [Bacillus cereus BAG2X1-3]
Length = 252
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YGLGI +HD EGR++T EF+ F++++ Y PNS GL RL YR+ +W+ +Y+
Sbjct: 73 EPLSVAYGLGIEEHDQEGRVITLEFEDFYMITLYTPNSKRGLERLDYRM-KWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L+++KPVI GDLN AH+EID+ NP NR++ GF+DEER+ F L +GFVDT+R
Sbjct: 132 KRLDEEKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKF-TRVLEEGFVDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + ++ D+ I +V GSDH P+ L
Sbjct: 191 YPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKEQITDAKINSEVMGSDHCPVEL 248
>gi|432942680|ref|XP_004083030.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 1
[Oryzias latipes]
Length = 311
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL VTYG+G +HD EGR++TAEF +FFL++ YVPN+ GL RL YR T WD +Y+
Sbjct: 132 EPLKVTYGIGKEEHDKEGRVITAEFPTFFLVTAYVPNASRGLVRLDYRKT-WDVDFQAYL 190
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL+ +KP++L GDLN AHQEID+ NP GN+++AGFT EER+ F + L+ GFVD+FR
Sbjct: 191 TELDVQKPLVLCGDLNVAHQEIDLKNPKGNKKNAGFTPEEREGF-SQLLAAGFVDSFREL 249
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 250 YPEQANAYTFWTYMMNSRAKNVGWRLDYFLLSSSLVPGLCDSKIRNKAMGSDHCPITLHL 309
Query: 181 KL 182
+
Sbjct: 310 AV 311
>gi|420496454|ref|ZP_14995017.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-23]
gi|393110512|gb|EJC11037.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-23]
Length = 250
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420431269|ref|ZP_14930290.1| exodeoxyribonuclease III [Helicobacter pylori Hp A-20]
gi|393044260|gb|EJB45254.1| exodeoxyribonuclease III [Helicobacter pylori Hp A-20]
Length = 250
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARNKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420451071|ref|ZP_14949925.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-45]
gi|393065003|gb|EJB65833.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-45]
Length = 250
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KTLELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420441204|ref|ZP_14940154.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-30]
gi|393054345|gb|EJB55274.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-30]
Length = 250
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDIKEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|327278208|ref|XP_003223854.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 1
[Anolis carolinensis]
Length = 314
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 122/183 (66%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPL V YG+G +HD EGR++TAEF S+FL++ YVPN+G GL RL YR + WD + SY
Sbjct: 134 VKPLEVKYGIGEEEHDKEGRVITAEFPSYFLVTSYVPNAGRGLVRLEYRQS-WDVAFRSY 192
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K L +KP+IL GDLN AH+EID+ NP GN+++AGFT EER F L +GFVDTFR
Sbjct: 193 LKGLAARKPLILCGDLNVAHEEIDLKNPKGNKKNAGFTPEERAGF-TKLLEEGFVDTFRH 251
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ YT+W Y R N GWRLDYF+VS+ L + DS I GSDH PI L
Sbjct: 252 LYPDTAYAYTFWTYMMNARSKNVGWRLDYFVVSKDLQESICDSKIRSTALGSDHCPITLY 311
Query: 180 LKL 182
+ +
Sbjct: 312 IAV 314
>gi|420466271|ref|ZP_14965031.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-6]
gi|393078846|gb|EJB79584.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-6]
Length = 250
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|303229843|ref|ZP_07316620.1| exodeoxyribonuclease III [Veillonella atypica ACS-134-V-Col7a]
gi|303231217|ref|ZP_07317955.1| exodeoxyribonuclease III [Veillonella atypica ACS-049-V-Sch6]
gi|302514124|gb|EFL56128.1| exodeoxyribonuclease III [Veillonella atypica ACS-049-V-Sch6]
gi|302515473|gb|EFL57438.1| exodeoxyribonuclease III [Veillonella atypica ACS-134-V-Col7a]
Length = 251
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/183 (50%), Positives = 124/183 (67%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP++VT G+GI +HD EGR++TAE+D+F+L+ CY PNS L RL YR+T W+ + +Y
Sbjct: 71 IKPIAVTNGIGIEEHDQEGRVITAEYDNFYLVCCYTPNSQRELARLDYRMT-WEDAFRAY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ EL+KKKPVIL GDLN AH EID+ NP NR++AGF+DEER L GF DTFR
Sbjct: 130 LLELDKKKPVILCGDLNVAHNEIDLKNPKTNRKNAGFSDEERAKM-TELLESGFTDTFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ V Y++W Y R N GWR+DYF+ S+ L DK ++ I + GSDH P+ L
Sbjct: 189 LYPDAVDEYSWWSYMGKARDRNVGWRIDYFITSKRLDDKIKEAKIHQQIFGSDHCPVELD 248
Query: 180 LKL 182
++L
Sbjct: 249 IEL 251
>gi|237753149|ref|ZP_04583629.1| exodeoxyribonuclease LexA [Helicobacter winghamensis ATCC BAA-430]
gi|229375416|gb|EEO25507.1| exodeoxyribonuclease LexA [Helicobacter winghamensis ATCC BAA-430]
Length = 250
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 120/179 (67%), Gaps = 3/179 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPLSV Y +GI+ HD EGR++TAEF F+L++ Y PNS L RL YR+ EW+ ++
Sbjct: 71 IKPLSVEYDMGIAHHDKEGRIITAEFSDFYLVNVYTPNSKRELERLEYRM-EWEDDFRTF 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K LE KKPVI+ GDLN AH+EID+ NP NRR+AGFTDEER+ A L GF DT+R
Sbjct: 130 LKNLESKKPVIVCGDLNVAHKEIDLKNPKTNRRNAGFTDEEREKMSA-LLDSGFTDTYRH 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G YT+W Y R N GWR+DYFL S+ L + + I P++ GSDH P+G+
Sbjct: 189 FYPEKQGAYTWWSYMGKARANNTGWRIDYFLCSKILDSRLKSASIYPEILGSDHCPVGI 247
>gi|401680683|ref|ZP_10812594.1| exodeoxyribonuclease III [Veillonella sp. ACP1]
gi|400218294|gb|EJO49178.1| exodeoxyribonuclease III [Veillonella sp. ACP1]
Length = 251
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/183 (50%), Positives = 124/183 (67%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP++VT G+GI +HD EGR++TAEFD+F+L+ CY PNS L RL YR+ W+ + +Y
Sbjct: 71 IKPIAVTNGIGIEEHDQEGRVITAEFDNFYLVCCYTPNSQRELARLDYRMA-WEDAFRAY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ EL+KKKPVIL GDLN AH EID+ NP NR++AGF+DEER L GF DTFR
Sbjct: 130 LLELDKKKPVILCGDLNVAHNEIDLKNPKTNRKNAGFSDEERAKM-TTLLESGFTDTFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ V Y++W Y R N GWR+DYF+ S+ L DK +++ I + GSDH P+ L
Sbjct: 189 LYPDAVDEYSWWSYMGKARDRNVGWRIDYFITSKRLDDKINEAKIHQQIFGSDHCPVELD 248
Query: 180 LKL 182
++L
Sbjct: 249 IEL 251
>gi|394994125|ref|ZP_10386855.1| ExoA [Bacillus sp. 916]
gi|393805011|gb|EJD66400.1| ExoA [Bacillus sp. 916]
Length = 252
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 125/182 (68%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL V YGLGI DHD EGR++T EF+ F+++CY PN+ GL R+ YR+ +W+ Y+
Sbjct: 73 KPLHVLYGLGIDDHDQEGRVITLEFEHVFVVNCYTPNAKRGLERIDYRL-QWEADFKDYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
++L++KKPVIL GDLN AH+EID+ NP NR++AGF+++ER++F A L+ GF D+FR
Sbjct: 132 QKLDRKKPVILCGDLNVAHREIDLKNPKANRKNAGFSEQEREAFSA-LLNAGFTDSFRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWRLDY +VS L + + I D+ GSDH P+ + +
Sbjct: 191 YPDREGAYSWWSYRTNAREKNIGWRLDYVIVSDRLKQRISQAAICADIMGSDHCPVEMTV 250
Query: 181 KL 182
L
Sbjct: 251 DL 252
>gi|420491838|ref|ZP_14990414.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-15]
gi|420525605|ref|ZP_15024008.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-15b]
gi|393108533|gb|EJC09067.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-15]
gi|393133626|gb|EJC34042.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-15b]
Length = 250
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDIKEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|47213945|emb|CAF94476.1| unnamed protein product [Tetraodon nigroviridis]
Length = 320
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/182 (52%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+ VTYG+G +HD EGR++TAEF FFL++ YVPNSG GL RL YR T WD +Y+
Sbjct: 141 EPVKVTYGIGKEEHDKEGRVITAEFPGFFLVTAYVPNSGRGLVRLDYRKT-WDADFRTYL 199
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL+ +KPV+L GDLN AHQEID+ NP GN+++AGFT EER+ FG L GFVD+FR
Sbjct: 200 SELDVQKPVVLCGDLNVAHQEIDLKNPKGNKKNAGFTAEEREGFG-QLLEAGFVDSFREL 258
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W Y R N GWRLDYF++S SL DS I V GSDH PI L +
Sbjct: 259 YPEQSHAYSFWTYMMNARDKNVGWRLDYFVLSSSLLPGLCDSKIRNQVKGSDHCPITLHM 318
Query: 181 KL 182
+
Sbjct: 319 AV 320
>gi|333394549|ref|ZP_08476368.1| exodeoxyribonuclease III [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
Length = 257
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 121/180 (67%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYG+G+++HD EGRL+T E+ F+LL+CY PNS L+RL YR++ W+ + SY+
Sbjct: 75 EPLNVTYGMGVAEHDQEGRLITLEYKDFYLLTCYTPNSQTKLKRLDYRMS-WEDAFRSYI 133
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L +KKPVI GDLN AH+ ID+ N N +AGF+DEER F + L+ GF D+FR
Sbjct: 134 STLNQKKPVIFCGDLNVAHEPIDLKNDKTNHHNAGFSDEERAKF-SQLLAAGFTDSFRYF 192
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R+ N GWR+DYF+ + L + D+ IL DV GSDH P+ L K
Sbjct: 193 YPDQVTYSWWSYRFNARQNNAGWRIDYFVTADQLQPQLADAAILTDVLGSDHCPVMLTTK 252
>gi|385221296|ref|YP_005782768.1| exodeoxyribonuclease III [Helicobacter pylori India7]
gi|317010103|gb|ADU80683.1| exodeoxyribonuclease III [Helicobacter pylori India7]
Length = 250
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ Y PNS L RL+YR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLNYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420531938|ref|ZP_15030309.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-28b]
gi|393135788|gb|EJC36183.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-28b]
Length = 250
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDIKEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420397962|ref|ZP_14897175.1| exodeoxyribonuclease III [Helicobacter pylori CPY1962]
gi|393014636|gb|EJB15807.1| exodeoxyribonuclease III [Helicobacter pylori CPY1962]
Length = 250
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|327278210|ref|XP_003223855.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 2
[Anolis carolinensis]
Length = 306
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 122/183 (66%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPL V YG+G +HD EGR++TAEF S+FL++ YVPN+G GL RL YR + WD + SY
Sbjct: 126 VKPLEVKYGIGEEEHDKEGRVITAEFPSYFLVTSYVPNAGRGLVRLEYRQS-WDVAFRSY 184
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K L +KP+IL GDLN AH+EID+ NP GN+++AGFT EER F L +GFVDTFR
Sbjct: 185 LKGLAARKPLILCGDLNVAHEEIDLKNPKGNKKNAGFTPEERAGF-TKLLEEGFVDTFRH 243
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ YT+W Y R N GWRLDYF+VS+ L + DS I GSDH PI L
Sbjct: 244 LYPDTAYAYTFWTYMMNARSKNVGWRLDYFVVSKDLQESICDSKIRSTALGSDHCPITLY 303
Query: 180 LKL 182
+ +
Sbjct: 304 IAV 306
>gi|420489725|ref|ZP_14988317.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-11]
gi|420523659|ref|ZP_15022077.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-11b]
gi|393105146|gb|EJC05697.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-11]
gi|393126008|gb|EJC26460.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-11b]
Length = 250
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR+ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMN-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|429759794|ref|ZP_19292289.1| exodeoxyribonuclease III [Veillonella atypica KON]
gi|429179014|gb|EKY20276.1| exodeoxyribonuclease III [Veillonella atypica KON]
Length = 251
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/183 (50%), Positives = 124/183 (67%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP++VT G+GI +HD EGR++TAE+D+F+L+ CY PNS L RL YR+T W+ + +Y
Sbjct: 71 IKPIAVTNGIGIEEHDQEGRVITAEYDNFYLVCCYTPNSQRELARLDYRMT-WEDAFRAY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ EL+KKKPVIL GDLN AH EID+ NP NR++AGF+DEER L GF DTFR
Sbjct: 130 LLELDKKKPVILCGDLNVAHNEIDLKNPKTNRKNAGFSDEERAKM-TELLESGFTDTFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ V Y++W Y R N GWR+DYF+ S+ L DK ++ I + GSDH P+ L
Sbjct: 189 LYPDAVDEYSWWSYMGKARDRNVGWRIDYFITSKRLDDKIKEAKIHQQIFGSDHCPVELD 248
Query: 180 LKL 182
++L
Sbjct: 249 IEL 251
>gi|420433080|ref|ZP_14932089.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-24]
gi|420508405|ref|ZP_15006911.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-24b]
gi|420510180|ref|ZP_15008676.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-24c]
gi|420532271|ref|ZP_15030634.1| exodeoxyribonuclease III [Helicobacter pylori Hp M1]
gi|420535643|ref|ZP_15033985.1| exodeoxyribonuclease III [Helicobacter pylori Hp M3]
gi|420537346|ref|ZP_15035676.1| exodeoxyribonuclease III [Helicobacter pylori Hp M4]
gi|420540833|ref|ZP_15039141.1| exodeoxyribonuclease III [Helicobacter pylori Hp M6]
gi|420543901|ref|ZP_15042190.1| exodeoxyribonuclease III [Helicobacter pylori Hp M9]
gi|393051948|gb|EJB52898.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-24]
gi|393115197|gb|EJC15708.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-24b]
gi|393116707|gb|EJC17212.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-24c]
gi|393139902|gb|EJC40275.1| exodeoxyribonuclease III [Helicobacter pylori Hp M1]
gi|393143291|gb|EJC43635.1| exodeoxyribonuclease III [Helicobacter pylori Hp M3]
gi|393144901|gb|EJC45232.1| exodeoxyribonuclease III [Helicobacter pylori Hp M4]
gi|393147453|gb|EJC47777.1| exodeoxyribonuclease III [Helicobacter pylori Hp M6]
gi|393158898|gb|EJC59154.1| exodeoxyribonuclease III [Helicobacter pylori Hp M9]
Length = 250
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDIKEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420481469|ref|ZP_14980108.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-1]
gi|420510358|ref|ZP_15008848.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-1b]
gi|393094477|gb|EJB95086.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-1]
gi|393122099|gb|EJC22576.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-1b]
Length = 250
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR+ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMN-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|260881707|ref|ZP_05405068.2| exodeoxyribonuclease III [Mitsuokella multacida DSM 20544]
gi|260848221|gb|EEX68228.1| exodeoxyribonuclease III [Mitsuokella multacida DSM 20544]
Length = 253
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 123/183 (67%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I+PL+VTYGLGI +HD EGR++T EF + ++ Y PNS GL RL+YR+ EW+ + +Y
Sbjct: 73 IEPLAVTYGLGIEEHDHEGRVITLEFPDCYFVTVYTPNSKRGLERLAYRM-EWEDAFRAY 131
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ L+ KKPVI+ GDLN AH EID+ NP N +AGFTDEER F L GF+DTFRA
Sbjct: 132 LVALDAKKPVIVCGDLNVAHTEIDLKNPKTNHHNAGFTDEERGKF-TELLDAGFIDTFRA 190
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G YT+W Y R TN GWR+DYF+ S L +K D+ I +V GSDH P+GL
Sbjct: 191 LYPDRTGIYTWWSYLRKARDTNAGWRIDYFVTSARLREKIADATIHNEVFGSDHCPVGLE 250
Query: 180 LKL 182
L+L
Sbjct: 251 LRL 253
>gi|420421296|ref|ZP_14920374.1| exodeoxyribonuclease III [Helicobacter pylori NQ4110]
gi|393037814|gb|EJB38848.1| exodeoxyribonuclease III [Helicobacter pylori NQ4110]
Length = 250
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|385226164|ref|YP_005786089.1| exodeoxyribonuclease III [Helicobacter pylori 83]
gi|332674310|gb|AEE71127.1| exodeoxyribonuclease III [Helicobacter pylori 83]
Length = 250
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRMVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|342214112|ref|ZP_08706820.1| exodeoxyribonuclease III [Veillonella sp. oral taxon 780 str.
F0422]
gi|341595797|gb|EGS38436.1| exodeoxyribonuclease III [Veillonella sp. oral taxon 780 str.
F0422]
Length = 175
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 89/175 (50%), Positives = 121/175 (69%), Gaps = 3/175 (1%)
Query: 9 GLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKK 68
G+GI +HD EGR++TAE++ F+L++CY PNS L RL YR+ EW+ + Y+ L+ KK
Sbjct: 3 GIGIEEHDQEGRVITAEYEKFYLVTCYTPNSQRELARLEYRM-EWEVAFREYLLALDAKK 61
Query: 69 PVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVV-G 127
PVIL GDLN AHQEID+ NP NR++AGF+DEER+ L+ GF DTFR + V
Sbjct: 62 PVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEEREKM-TELLAAGFTDTFRYLYPDAVDA 120
Query: 128 YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
Y++W Y R+ N GWR+DYFLVS S+ADK ++ I D+ GSDH P+ L++ L
Sbjct: 121 YSWWSYMGKARERNVGWRIDYFLVSNSIADKIQEAKIHADIFGSDHCPVELVMDL 175
>gi|387908710|ref|YP_006339044.1| exodeoxyribonuclease III [Helicobacter pylori XZ274]
gi|387573645|gb|AFJ82353.1| exodeoxyribonuclease III [Helicobacter pylori XZ274]
Length = 250
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|381150965|ref|ZP_09862834.1| exodeoxyribonuclease III [Methylomicrobium album BG8]
gi|380882937|gb|EIC28814.1| exodeoxyribonuclease III [Methylomicrobium album BG8]
Length = 254
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V +GI++HD EGR++ AEF+ F L++ YVPNSG L RL YR T WD +Y+
Sbjct: 75 EPLAVVKDIGIAEHDREGRVIAAEFEHFHLVNVYVPNSGQELVRLDYRRT-WDAEFLTYL 133
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGN-RRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+LE +KPVI+ GD N AH+EIDI P N +SAG+T E F + FL GFVDTFR
Sbjct: 134 LKLESRKPVIVCGDFNVAHREIDIARPKANYNKSAGYTQAEIDGF-SRFLDAGFVDTFRH 192
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
H V Y++W +R R N GWR+DY L S++LADK ++ILP+VTGSDH P+G+ +
Sbjct: 193 HHPDTVAYSWWSFRANARANNIGWRIDYALASRALADKVKQAFILPEVTGSDHCPVGIEI 252
Query: 181 KL 182
L
Sbjct: 253 DL 254
>gi|257877428|ref|ZP_05657081.1| exodeoxyribonuclease [Enterococcus casseliflavus EC20]
gi|325568814|ref|ZP_08145107.1| exodeoxyribonuclease III [Enterococcus casseliflavus ATCC 12755]
gi|257811594|gb|EEV40414.1| exodeoxyribonuclease [Enterococcus casseliflavus EC20]
gi|325157852|gb|EGC70008.1| exodeoxyribonuclease III [Enterococcus casseliflavus ATCC 12755]
Length = 250
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 4 LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKE 63
LSV YGLGI +HD+EGR++T E+ FFL++CY PNS + LRRL YR+T W+ + +Y+ E
Sbjct: 74 LSVRYGLGIEEHDTEGRVITLEYPEFFLITCYTPNSQNELRRLDYRMT-WEDAFLAYLTE 132
Query: 64 LEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHR 123
L+++KPVIL GDLN AH+ IDI N N++SAGFT EER+ F + L+ GF DTFR +
Sbjct: 133 LKQQKPVILCGDLNVAHKNIDIKNWKTNQKSAGFTPEEREKF-STLLAAGFTDTFRYFYP 191
Query: 124 GVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
G Y++W YR RK N GWR+DYF+VS L ++ D+ I D+ GSDH P+ L L
Sbjct: 192 DAEGIYSWWSYRFNARKNNAGWRIDYFVVSDDLNERLLDAKIHTDIIGSDHCPVELDL 249
>gi|420535388|ref|ZP_15033733.1| exodeoxyribonuclease III [Helicobacter pylori Hp M2]
gi|420539073|ref|ZP_15037392.1| exodeoxyribonuclease III [Helicobacter pylori Hp M5]
gi|393139673|gb|EJC40047.1| exodeoxyribonuclease III [Helicobacter pylori Hp M2]
gi|393146758|gb|EJC47083.1| exodeoxyribonuclease III [Helicobacter pylori Hp M5]
Length = 236
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 58 EPLSVSYGIDIKEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFRKFL 116
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 117 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNE-LLNAGFIDTFRYF 175
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 176 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 235
>gi|420452902|ref|ZP_14951743.1| exodeoxyribonuclease III [Helicobacter pylori Hp A-6]
gi|393066715|gb|EJB67534.1| exodeoxyribonuclease III [Helicobacter pylori Hp A-6]
Length = 250
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDIEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFN-ELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420447816|ref|ZP_14946702.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-43]
gi|420476276|ref|ZP_14974943.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-21]
gi|393061877|gb|EJB62737.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-43]
gi|393090183|gb|EJB90817.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-21]
Length = 250
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420437930|ref|ZP_14936910.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-28]
gi|393050857|gb|EJB51811.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-28]
Length = 243
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 65 EPLSVSYGINIEEHDKEGRVITCEFESFYLVNVYTPNSQQALFRLSYRMS-WEVEFKKFL 123
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 124 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 182
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 183 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 242
>gi|425790226|ref|YP_007018143.1| exodeoxyribonuclease III [Helicobacter pylori Aklavik86]
gi|425628541|gb|AFX89081.1| exodeoxyribonuclease III [Helicobacter pylori Aklavik86]
Length = 250
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 119/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ YVPNS L RLSYR+ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVVTCEFESFYLVNVYVPNSQQALSRLSYRMG-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLDAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|208435390|ref|YP_002267056.1| exodeoxyribonuclease III [Helicobacter pylori G27]
gi|208433319|gb|ACI28190.1| exodeoxyribonuclease [Helicobacter pylori G27]
Length = 250
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|384890060|ref|YP_005764362.1| exodeoxyribonuclease III [Helicobacter pylori v225d]
gi|297380626|gb|ADI35513.1| exodeoxyribonuclease III [Helicobacter pylori v225d]
Length = 250
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+ F+L++ YVPNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVVTCEFELFYLVNVYVPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420415952|ref|ZP_14915065.1| exodeoxyribonuclease III [Helicobacter pylori NQ4053]
gi|393031857|gb|EJB32928.1| exodeoxyribonuclease III [Helicobacter pylori NQ4053]
Length = 250
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420411264|ref|ZP_14910396.1| exodeoxyribonuclease III [Helicobacter pylori NQ4228]
gi|393030053|gb|EJB31132.1| exodeoxyribonuclease III [Helicobacter pylori NQ4228]
Length = 250
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F + L+ GF+DTFR
Sbjct: 131 KTLELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|229162671|ref|ZP_04290628.1| Exodeoxyribonuclease [Bacillus cereus R309803]
gi|228620553|gb|EEK77422.1| Exodeoxyribonuclease [Bacillus cereus R309803]
Length = 252
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGR++T EF+ F +++ Y PNS GL RL YR+ +W+ +Y+
Sbjct: 73 EPLSVTYGLGIEEHDQEGRVITLEFEDFHMITLYTPNSKRGLERLDYRM-KWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+EID+ NP NR++ GF+DEER+ F L +GF+DT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTC-VLEEGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + ++ ++ I +V GSDH P+ L
Sbjct: 191 YPDQKGAYSWWSYRMGARAKNIGWRLDYFVVSERMKNQITEAKINSEVMGSDHCPVEL 248
>gi|420439551|ref|ZP_14938514.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-29]
gi|393053870|gb|EJB54812.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-29]
Length = 250
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDIKEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFN-ELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420467774|ref|ZP_14966523.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-9]
gi|393083034|gb|EJB83748.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-9]
Length = 250
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420446253|ref|ZP_14945154.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-42]
gi|393059442|gb|EJB60322.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-42]
Length = 236
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 58 EPLSVSYGIDIKEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 116
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 117 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERKKF-SELLNAGFIDTFRYF 175
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 176 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 235
>gi|365903535|ref|ZP_09441358.1| exodeoxyribonuclease III Xth [Lactobacillus malefermentans KCTC
3548]
Length = 254
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 125/179 (69%), Gaps = 3/179 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YG+ + + D EGR +T E+ SFFL++CY PNSG L+RL +R+ +WDP+ SY+
Sbjct: 72 EPLSVHYGINVPELDHEGRTITLEYKSFFLVTCYTPNSGHELKRLDFRM-QWDPAFQSYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L K+KPVI+ GDLN AH EID+ +P N +AGFTDEER++F L GF+DT+R
Sbjct: 131 LKLNKRKPVIICGDLNVAHSEIDLKSPTSNHHNAGFTDEERENF-TTLLDSGFIDTYRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ Y++W YR R+ N GWR+DYFL S+SLA + D+ IL +V GSDH P+ L+
Sbjct: 190 YPDKKEKYSWWSYRTKAREVNSGWRIDYFLASKSLAPRISDANILTNVMGSDHCPVVLM 248
>gi|282858966|ref|ZP_06268104.1| exodeoxyribonuclease III [Prevotella bivia JCVIHMP010]
gi|424898885|ref|ZP_18322433.1| exodeoxyribonuclease III [Prevotella bivia DSM 20514]
gi|282588246|gb|EFB93413.1| exodeoxyribonuclease III [Prevotella bivia JCVIHMP010]
gi|388593595|gb|EIM33832.1| exodeoxyribonuclease III [Prevotella bivia DSM 20514]
Length = 249
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 124/180 (68%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VT G+GI +HD EGR++T E D F+L++ Y PNS D L+RL+YR+ +W+ +Y+
Sbjct: 72 KPLTVTTGIGIDEHDHEGRVITLEMDDFYLVTVYTPNSQDELKRLAYRM-QWETDFQAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L++ KPVI+ GD+N AH+EID+ NP N +AGF+DEER+ L+ GF DTFR
Sbjct: 131 HKLDEHKPVIVCGDMNVAHEEIDLKNPKTNHHNAGFSDEEREKMTI-LLNNGFTDTFRYL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R+ N GWR+DYFL+S L D+ D+ I ++ GSDH P+ L LK
Sbjct: 190 YPEQVTYSWWSYRFKAREKNTGWRIDYFLISNRLRDRLKDAKIHTEIFGSDHCPVELTLK 249
>gi|384895029|ref|YP_005769078.1| exodeoxyribonuclease III [Helicobacter pylori Sat464]
gi|308064283|gb|ADO06170.1| exodeoxyribonuclease III [Helicobacter pylori Sat464]
Length = 250
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+ F+L++ YVPNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVVTCEFELFYLVNVYVPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSHPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|421720502|ref|ZP_16159782.1| exodeoxyribonuclease III [Helicobacter pylori R046Wa]
gi|407219094|gb|EKE88911.1| exodeoxyribonuclease III [Helicobacter pylori R046Wa]
Length = 250
Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RL+YR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLNYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|169345728|ref|ZP_02865687.1| exodeoxyribonuclease III [Clostridium perfringens C str. JGS1495]
gi|169297128|gb|EDS79244.1| exodeoxyribonuclease III [Clostridium perfringens C str. JGS1495]
Length = 250
Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 126/181 (69%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V YG+ + HD EGR++T EF+ FF+++ Y PNS L RL YR+ EW+ +Y+
Sbjct: 72 EPLNVYYGINMEHHDKEGRVITLEFEDFFMVTVYTPNSQSELARLEYRM-EWEDDFRNYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL KK V++ GDLN AH+EID+ NP NR++AGFTDEER F + LS GF+DTFR
Sbjct: 131 LELSSKKGVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDKF-STLLSSGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR RK N GWR+DYFLVS +L D+ +++I ++ GSDH P+ LI+
Sbjct: 190 NPDLEGVYSWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEAFIDTEILGSDHCPVKLIM 249
Query: 181 K 181
+
Sbjct: 250 E 250
>gi|168205412|ref|ZP_02631417.1| exodeoxyribonuclease III [Clostridium perfringens E str. JGS1987]
gi|170663003|gb|EDT15686.1| exodeoxyribonuclease III [Clostridium perfringens E str. JGS1987]
Length = 250
Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 126/181 (69%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V YG+ + HD EGR++T EF+ FF+++ Y PNS L RL YR+ EW+ +Y+
Sbjct: 72 EPLNVYYGINMEHHDKEGRVITLEFEDFFMVTVYTPNSQSELARLEYRM-EWEDDFRNYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL KK V++ GDLN AH+EID+ NP NR++AGFTDEER F + LS GF+DTFR
Sbjct: 131 LELSSKKGVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDKF-STLLSSGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR RK N GWR+DYFLVS +L D+ +++I ++ GSDH P+ LI+
Sbjct: 190 NPDLEGIYSWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEAFIDTEILGSDHCPVKLIM 249
Query: 181 K 181
+
Sbjct: 250 E 250
>gi|420397741|ref|ZP_14896957.1| exodeoxyribonuclease III [Helicobacter pylori CPY1313]
gi|393011286|gb|EJB12474.1| exodeoxyribonuclease III [Helicobacter pylori CPY1313]
Length = 250
Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|255993955|ref|ZP_05427090.1| exodeoxyribonuclease III [Eubacterium saphenum ATCC 49989]
gi|255993623|gb|EEU03712.1| exodeoxyribonuclease III [Eubacterium saphenum ATCC 49989]
Length = 252
Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 120/182 (65%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+ +S + G+GI +HD EGR+VTA+F F+L++ YVPNS L RL YR W+ YV
Sbjct: 73 EAVSTSKGIGIEEHDEEGRVVTADFKDFYLVNVYVPNSKPELARLDYR-QHWEDDFRDYV 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L K+KPVI+ GDLN AH EID+ NP NRR+ GFTDEER+ F L GF DTFR +
Sbjct: 132 VKLNKEKPVIICGDLNVAHTEIDLKNPKTNRRNPGFTDEEREKF-TELLEAGFTDTFRYK 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G YT+W YR RK N GWR+DYFLVS + DK D+ IL DV GSDH P+ L L
Sbjct: 191 YPDKEGAYTWWSYRFNARKNNAGWRIDYFLVSNDVKDKIEDAKILSDVYGSDHCPVVLEL 250
Query: 181 KL 182
+
Sbjct: 251 DI 252
>gi|423488860|ref|ZP_17465542.1| exodeoxyribonuclease [Bacillus cereus BtB2-4]
gi|423494585|ref|ZP_17471229.1| exodeoxyribonuclease [Bacillus cereus CER057]
gi|423498625|ref|ZP_17475242.1| exodeoxyribonuclease [Bacillus cereus CER074]
gi|401151646|gb|EJQ59092.1| exodeoxyribonuclease [Bacillus cereus CER057]
gi|401159283|gb|EJQ66668.1| exodeoxyribonuclease [Bacillus cereus CER074]
gi|402433215|gb|EJV65269.1| exodeoxyribonuclease [Bacillus cereus BtB2-4]
Length = 252
Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 124/178 (69%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGR++T EF+ F++++ Y PNS GL RL YR+ +W+ +Y+
Sbjct: 73 EPLSVTYGLGIEEHDQEGRVITLEFEDFYMITLYTPNSKRGLERLDYRM-KWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L +KK V+ GDLN AH+EID+ NP NR++ GF+DEER+ F L +GFVDT+R
Sbjct: 132 KRLNEKKSVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKF-TRTLEEGFVDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + DK ++ I ++ GSDH P+ L
Sbjct: 191 YPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDKITEAKINSEIMGSDHCPVEL 248
>gi|420396107|ref|ZP_14895329.1| exodeoxyribonuclease III [Helicobacter pylori CPY1124]
gi|420402996|ref|ZP_14902182.1| exodeoxyribonuclease III [Helicobacter pylori CPY6261]
gi|393011086|gb|EJB12275.1| exodeoxyribonuclease III [Helicobacter pylori CPY1124]
gi|393020162|gb|EJB21301.1| exodeoxyribonuclease III [Helicobacter pylori CPY6261]
Length = 250
Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|188528295|ref|YP_001910982.1| exodeoxyribonuclease III [Helicobacter pylori Shi470]
gi|188144535|gb|ACD48952.1| exodeoxyribonuclease [Helicobacter pylori Shi470]
Length = 250
Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+ F+L++ YVPNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVVTCEFELFYLVNVYVPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSHPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|134045625|ref|YP_001097111.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C5]
gi|132663250|gb|ABO34896.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C5]
Length = 249
Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 123/180 (68%), Gaps = 2/180 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP V YG+ S+H+ EGR++T +FD ++L++ Y PNS GL RL YR +WD +Y
Sbjct: 71 IKPNEVIYGIKNSEHNGEGRVITLKFDEYYLVNVYTPNSQRGLTRLKYR-QKWDQDFLNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK LE KKPVI GDLN AH+EID+ NP N ++AGFT EER+ F N ++ GF+DTFR
Sbjct: 130 VKTLENKKPVIFCGDLNVAHKEIDLKNPKTNVKNAGFTPEERKGFD-NIVNSGFLDTFRE 188
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
++ Y++W YR R N GWR+DYF +S+SL + D++I+ ++ GSDH P+G+I
Sbjct: 189 FNKEPDNYSWWSYRFNARARNIGWRIDYFCISESLRNNLKDAFIMSEIMGSDHCPVGIIF 248
>gi|386751875|ref|YP_006225095.1| exodeoxyribonuclease III [Helicobacter pylori Shi417]
gi|384558133|gb|AFH98601.1| exodeoxyribonuclease III [Helicobacter pylori Shi417]
Length = 250
Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+ F+L++ YVPNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVVTCEFELFYLVNVYVPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSHPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420461013|ref|ZP_14959808.1| exodeoxyribonuclease III [Helicobacter pylori Hp A-27]
gi|393074587|gb|EJB75346.1| exodeoxyribonuclease III [Helicobacter pylori Hp A-27]
Length = 250
Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|187933475|ref|YP_001885926.1| exodeoxyribonuclease III [Clostridium botulinum B str. Eklund 17B]
gi|187721628|gb|ACD22849.1| exodeoxyribonuclease III [Clostridium botulinum B str. Eklund 17B]
Length = 251
Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 122/181 (67%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+++ G+GI +HD EGR++T EF+ F+L++ Y PNS L R+ YR+ W+ SY+
Sbjct: 73 KPLNISLGIGIEEHDKEGRVLTLEFEEFYLVNVYTPNSQQKLARIDYRMA-WENDFRSYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL K KPVI+ GDLN AH+EID+ NP NR +AGF+DEER+ FG L GF+DT+R
Sbjct: 132 NELNKAKPVIVCGDLNVAHKEIDLKNPKNNRNNAGFSDEEREKFGE-LLKSGFIDTYRYF 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R N GWR+DYFLVS+ D+ D+ I + GSDH P+ LI+
Sbjct: 191 YPDKEGAYSWWSYRFNARANNAGWRIDYFLVSKDFEDRLVDAKIHTQIEGSDHCPVELII 250
Query: 181 K 181
K
Sbjct: 251 K 251
>gi|421709245|ref|ZP_16148605.1| exodeoxyribonuclease III [Helicobacter pylori R018c]
gi|421722501|ref|ZP_16161760.1| exodeoxyribonuclease III [Helicobacter pylori R056a]
gi|407211802|gb|EKE81667.1| exodeoxyribonuclease III [Helicobacter pylori R018c]
gi|407226285|gb|EKE96051.1| exodeoxyribonuclease III [Helicobacter pylori R056a]
Length = 250
Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNDGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420476560|ref|ZP_14975223.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-23]
gi|393094985|gb|EJB95590.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-23]
Length = 250
Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDIKEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFN-ELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|291546831|emb|CBL19939.1| exodeoxyribonuclease III [Ruminococcus sp. SR1/5]
Length = 251
Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLS YG+GI +HD EGR++T EFD ++ ++ Y PNS LRRL YR+ +W+ +Y+
Sbjct: 72 EPLSAAYGIGIEEHDKEGRVITLEFDEYYFVTVYTPNSQSELRRLEYRM-KWEEDFLAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L++KKPVI GDLN AHQEID+ NP NR++AGFTDEER F L GF+DTFR
Sbjct: 131 LKLQEKKPVICCGDLNVAHQEIDLKNPKTNRKNAGFTDEERACF-TRALESGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWR+DYFLVS SL +K D+ I ++ GSDH P+ L +
Sbjct: 190 YPDKEGVYSWWSYRFRAREKNAGWRIDYFLVSPSLKEKLQDAKIHGEIMGSDHCPVELDI 249
Query: 181 KL 182
L
Sbjct: 250 DL 251
>gi|424756722|ref|ZP_18184524.1| exodeoxyribonuclease III [Enterococcus faecalis R508]
gi|402408116|gb|EJV40605.1| exodeoxyribonuclease III [Enterococcus faecalis R508]
Length = 251
Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 125/180 (69%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+ LSV YGLGI HD EGR++T E+ FF+++CY PNS L+RL+YR+T W+ + S+Y+
Sbjct: 72 EALSVRYGLGIEAHDQEGRVITLEYPEFFIVTCYTPNSQAELKRLAYRMT-WEDAFSAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL ++KPVIL GDLN AHQ ID+ N N+++AGFT EERQ F + L GF DTFR
Sbjct: 131 NELNQEKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQKF-TDLLDSGFTDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS+SL ++ + I D+ GSDH P+ ++L
Sbjct: 190 YPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDILGSDHCPVEVVL 249
>gi|384895292|ref|YP_005769281.1| exodeoxyribonuclease III [Helicobacter pylori 35A]
gi|315585908|gb|ADU40289.1| exodeoxyribonuclease III [Helicobacter pylori 35A]
Length = 250
Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|320163204|gb|EFW40103.1| APEX nuclease [Capsaspora owczarzaki ATCC 30864]
Length = 429
Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 118/181 (65%), Gaps = 2/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+ V++GL + +HD+EGR++TAEF F+L++ YVPNSG L L YR T WD + +Y+
Sbjct: 251 QPIRVSFGLNVPEHDTEGRVITAEFADFYLVTAYVPNSGQKLETLPYRQT-WDVAFRTYL 309
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L+ KKPV+L GDLN AH EID+ NP N+RSAGFT +ER+ F L FVD+FR
Sbjct: 310 LSLDAKKPVVLCGDLNVAHNEIDLKNPKTNKRSAGFTPQEREGF-TTILGTEFVDSFRVL 368
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ Y++W YRH R N GWRLDYF+VSQ DS I V GSDH PI L L
Sbjct: 369 YPEESAYSFWSYRHNSRALNVGWRLDYFVVSQRFMQSVADSQIRSQVYGSDHCPIVLHLS 428
Query: 182 L 182
L
Sbjct: 429 L 429
>gi|225026087|ref|ZP_03715279.1| hypothetical protein EUBHAL_00328 [Eubacterium hallii DSM 3353]
gi|224956574|gb|EEG37783.1| exodeoxyribonuclease III [Eubacterium hallii DSM 3353]
Length = 250
Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 123/180 (68%), Gaps = 3/180 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V G+G+ +HD EGR++T EF+ FF ++ Y PNS L+RL YR+ +W+ Y++
Sbjct: 73 PLKVWNGIGMEEHDQEGRVITLEFEDFFFVTVYTPNSQSELKRLDYRM-KWEDDFREYLQ 131
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
EL+K+KPVI+TGDLN AH+EID+ NP N+++AGFT EER F L GFVD+FR +
Sbjct: 132 ELDKEKPVIMTGDLNVAHEEIDLKNPKTNKKNAGFTQEERNKF-TELLGAGFVDSFRYLN 190
Query: 123 RGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ G YT+W YR R+ + GWR+DYF+VS+ +K D+ I V GSDH PIGL +K
Sbjct: 191 PELAGAYTWWSYRFKAREKDAGWRIDYFVVSERWKEKIEDAIIYKTVMGSDHCPIGLQMK 250
>gi|420457745|ref|ZP_14956558.1| exodeoxyribonuclease III [Helicobacter pylori Hp A-16]
gi|393072264|gb|EJB73043.1| exodeoxyribonuclease III [Helicobacter pylori Hp A-16]
Length = 250
Score = 191 bits (485), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420419486|ref|ZP_14918576.1| exodeoxyribonuclease III [Helicobacter pylori NQ4076]
gi|393031392|gb|EJB32464.1| exodeoxyribonuclease III [Helicobacter pylori NQ4076]
Length = 250
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|363896773|ref|ZP_09323322.1| exodeoxyribonuclease [Oribacterium sp. ACB7]
gi|361960338|gb|EHL13587.1| exodeoxyribonuclease [Oribacterium sp. ACB7]
Length = 251
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 126/181 (69%), Gaps = 2/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+G+ +HD EGR++TAEF F+L++ YVPNS L+RL YR+ E++ + +Y+
Sbjct: 73 EPLSVSYGIGVEEHDQEGRVITAEFKDFYLITVYVPNSQGELKRLPYRM-EFEDAFLNYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
LEKKKPV+ GDLN AH+EID+ NP N SAGF+DEER F + L G++D+FR
Sbjct: 132 LNLEKKKPVVYCGDLNVAHEEIDLKNPDTNHLSAGFSDEERAKF-SRVLDNGYLDSFRYF 190
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ Y++W YR R+ N GWR+DYF+VS+ L K H + I +V GSDH P+ LIL
Sbjct: 191 YPEKEEYSWWSYRTKARERNVGWRIDYFVVSKQLEKKLHSASIHTEVMGSDHCPVELILD 250
Query: 182 L 182
L
Sbjct: 251 L 251
>gi|160945969|ref|ZP_02093195.1| hypothetical protein FAEPRAM212_03502 [Faecalibacterium prausnitzii
M21/2]
gi|158443700|gb|EDP20705.1| exodeoxyribonuclease III [Faecalibacterium prausnitzii M21/2]
gi|295103228|emb|CBL00772.1| exodeoxyribonuclease III [Faecalibacterium prausnitzii SL3/3]
Length = 250
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 122/180 (67%), Gaps = 2/180 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL+VT G+G+ HD EGR++T E+ F+L++CY PNS DGL+RL YR+ EW+ + +Y+
Sbjct: 73 PLAVTTGIGLEQHDHEGRVLTLEYPGFYLVNCYTPNSQDGLKRLDYRM-EWEDAFRAYLL 131
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L+ KKPVIL GDLN AH E+DI N NR SAGFTD+ER L+ GF D+FR H
Sbjct: 132 ALDAKKPVILCGDLNVAHTEMDIKNAKTNRMSAGFTDQERAKM-TELLAAGFADSFRVVH 190
Query: 123 RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
V Y++W YR R+ N GWR+DYF+VS+ +AD+ + I ++ GSDH P+ L + L
Sbjct: 191 PDEVKYSWWSYRFHAREKNAGWRIDYFIVSRRIADRIRAAEIHNEIFGSDHCPVELQIDL 250
>gi|420520352|ref|ZP_15018787.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-5b]
gi|425433141|ref|ZP_18813679.1| exodeoxyribonuclease III [Helicobacter pylori GAM100Ai]
gi|393124748|gb|EJC25215.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-5b]
gi|410714293|gb|EKQ71771.1| exodeoxyribonuclease III [Helicobacter pylori GAM100Ai]
Length = 250
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420407902|ref|ZP_14907061.1| exodeoxyribonuclease III [Helicobacter pylori NQ4216]
gi|393025387|gb|EJB26493.1| exodeoxyribonuclease III [Helicobacter pylori NQ4216]
Length = 250
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RL+YR++ W+ ++
Sbjct: 72 EPLSVSYGIDIKEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLNYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420263761|ref|ZP_14766397.1| exodeoxyribonuclease [Enterococcus sp. C1]
gi|394769203|gb|EJF49066.1| exodeoxyribonuclease [Enterococcus sp. C1]
Length = 250
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/179 (51%), Positives = 126/179 (70%), Gaps = 3/179 (1%)
Query: 4 LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKE 63
LSV YGLGI +HD+EGR++T E+ FFL++CY PNS + LRRL YR+T W+ + +Y+ E
Sbjct: 74 LSVRYGLGIEEHDTEGRVITLEYPEFFLITCYTPNSQNELRRLDYRMT-WEDAFLAYLTE 132
Query: 64 LEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHR 123
L+++K VIL GDLN AH+ IDI N N++SAGFT EER+ F + L+ GF DTFR +
Sbjct: 133 LKQQKSVILCGDLNVAHKNIDIKNWKTNQKSAGFTPEEREKF-STLLAAGFTDTFRYFYP 191
Query: 124 GVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
G Y++W YR RK N GWR+DYF+VS +L ++ D+ I D+ GSDH P+ L LK
Sbjct: 192 DAEGIYSWWSYRFNARKNNAGWRIDYFVVSDNLNERLLDAKIHTDIIGSDHCPVELDLK 250
>gi|295110263|emb|CBL24216.1| exodeoxyribonuclease III [Ruminococcus obeum A2-162]
Length = 253
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 122/178 (68%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV G+GI HD EGR++T EF+ F+ ++ Y PNS LRRL YR+ EW+ +Y+
Sbjct: 72 EPLSVVNGIGIEAHDKEGRVITLEFEEFYFVTVYTPNSQSELRRLEYRM-EWERDFLAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L++KKPVI GD+N AHQEID+ NP NR++AGFTDEER F + L GFVDTFR
Sbjct: 131 LKLQEKKPVICCGDMNVAHQEIDLKNPKTNRKNAGFTDEERACF-SRMLESGFVDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR R+ N GWR+DYF+VS SL D+ D+ I ++ GSDH P+ L
Sbjct: 190 YPDKEGIYSWWSYRFKAREKNAGWRIDYFIVSPSLKDRLQDASIHTEIMGSDHCPVEL 247
>gi|227519480|ref|ZP_03949529.1| exodeoxyribonuclease [Enterococcus faecalis TX0104]
gi|422727704|ref|ZP_16784135.1| exodeoxyribonuclease III [Enterococcus faecalis TX0012]
gi|424677217|ref|ZP_18114076.1| exodeoxyribonuclease III [Enterococcus faecalis ERV103]
gi|424679202|ref|ZP_18116030.1| exodeoxyribonuclease III [Enterococcus faecalis ERV116]
gi|424682483|ref|ZP_18119253.1| exodeoxyribonuclease III [Enterococcus faecalis ERV129]
gi|424686042|ref|ZP_18122715.1| exodeoxyribonuclease III [Enterococcus faecalis ERV25]
gi|424689047|ref|ZP_18125641.1| exodeoxyribonuclease III [Enterococcus faecalis ERV31]
gi|424692659|ref|ZP_18129142.1| exodeoxyribonuclease III [Enterococcus faecalis ERV37]
gi|424695850|ref|ZP_18132222.1| exodeoxyribonuclease III [Enterococcus faecalis ERV41]
gi|424699041|ref|ZP_18135281.1| exodeoxyribonuclease III [Enterococcus faecalis ERV62]
gi|424702698|ref|ZP_18138845.1| exodeoxyribonuclease III [Enterococcus faecalis ERV63]
gi|424705840|ref|ZP_18141862.1| exodeoxyribonuclease III [Enterococcus faecalis ERV65]
gi|424716100|ref|ZP_18145417.1| exodeoxyribonuclease III [Enterococcus faecalis ERV68]
gi|424719240|ref|ZP_18148416.1| exodeoxyribonuclease III [Enterococcus faecalis ERV72]
gi|424724426|ref|ZP_18153372.1| exodeoxyribonuclease III [Enterococcus faecalis ERV73]
gi|424726233|ref|ZP_18154907.1| exodeoxyribonuclease III [Enterococcus faecalis ERV81]
gi|424734642|ref|ZP_18163137.1| exodeoxyribonuclease III [Enterococcus faecalis ERV85]
gi|424746779|ref|ZP_18175000.1| exodeoxyribonuclease III [Enterococcus faecalis ERV93]
gi|227073092|gb|EEI11055.1| exodeoxyribonuclease [Enterococcus faecalis TX0104]
gi|315151770|gb|EFT95786.1| exodeoxyribonuclease III [Enterococcus faecalis TX0012]
gi|402355247|gb|EJU90024.1| exodeoxyribonuclease III [Enterococcus faecalis ERV103]
gi|402357580|gb|EJU92285.1| exodeoxyribonuclease III [Enterococcus faecalis ERV116]
gi|402367516|gb|EJV01856.1| exodeoxyribonuclease III [Enterococcus faecalis ERV129]
gi|402368116|gb|EJV02441.1| exodeoxyribonuclease III [Enterococcus faecalis ERV25]
gi|402369475|gb|EJV03753.1| exodeoxyribonuclease III [Enterococcus faecalis ERV31]
gi|402377670|gb|EJV11567.1| exodeoxyribonuclease III [Enterococcus faecalis ERV37]
gi|402377770|gb|EJV11662.1| exodeoxyribonuclease III [Enterococcus faecalis ERV62]
gi|402379084|gb|EJV12904.1| exodeoxyribonuclease III [Enterococcus faecalis ERV41]
gi|402386727|gb|EJV20225.1| exodeoxyribonuclease III [Enterococcus faecalis ERV63]
gi|402388863|gb|EJV22288.1| exodeoxyribonuclease III [Enterococcus faecalis ERV68]
gi|402389270|gb|EJV22670.1| exodeoxyribonuclease III [Enterococcus faecalis ERV65]
gi|402395163|gb|EJV28284.1| exodeoxyribonuclease III [Enterococcus faecalis ERV73]
gi|402396815|gb|EJV29860.1| exodeoxyribonuclease III [Enterococcus faecalis ERV72]
gi|402400257|gb|EJV33096.1| exodeoxyribonuclease III [Enterococcus faecalis ERV81]
gi|402406913|gb|EJV39456.1| exodeoxyribonuclease III [Enterococcus faecalis ERV85]
gi|402409191|gb|EJV41626.1| exodeoxyribonuclease III [Enterococcus faecalis ERV93]
Length = 251
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 124/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+ LSV YGLGI HD EGR++T E+ FF+++CY PNS L+RL+YR+T W+ + S+Y+
Sbjct: 72 EALSVRYGLGIEAHDQEGRVITLEYPEFFIVTCYTPNSQAELKRLAYRMT-WEDAFSAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL ++KPVIL GDLN AHQ ID+ N N+++AGFT EERQ F L GF DTFR
Sbjct: 131 NELNQEKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQKF-TELLDSGFTDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS+SL ++ + I D+ GSDH P+ ++L
Sbjct: 190 YPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDILGSDHCPVEVVL 249
>gi|207091978|ref|ZP_03239765.1| exodeoxyribonuclease [Helicobacter pylori HPKX_438_AG0C1]
Length = 250
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L R+SYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRISYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKERAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|336429860|ref|ZP_08609818.1| exodeoxyribonuclease [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336001765|gb|EGN31900.1| exodeoxyribonuclease [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 252
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 128/181 (70%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLG+ +HD EGR++T EF F++++ Y PNS DGL RL YR+T W+ Y+
Sbjct: 72 EPLSVSYGLGLEEHDQEGRVITLEFPDFYMVTVYTPNSQDGLARLDYRMT-WEEEFLKYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE+KKPVI GDLN AH+EID+ NP NR++AGFTDEER+ F L GF+DTFR
Sbjct: 131 KKLEEKKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEEREKFSV-LLENGFIDTFRYF 189
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR R+ N GWR+DYFLVS L ++ D+ I DV GSDH P+ LIL
Sbjct: 190 YPDLKDAYSWWSYRFHAREKNAGWRIDYFLVSPQLKERLEDAVIYKDVFGSDHCPVALIL 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|291528729|emb|CBK94315.1| exodeoxyribonuclease III [Eubacterium rectale M104/1]
Length = 251
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+GI +HD EGR++T E+D+F+L++CY PNS + L+RL YR+ +W+ Y+
Sbjct: 72 EPLSVSYGIGIEEHDKEGRVITLEYDNFYLVTCYTPNSQNELKRLPYRM-QWEDDFREYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L+ KKPV+L GDLN AH EID+ NP NR++AGF+DEER L GF DTFR
Sbjct: 131 KTLDAKKPVVLCGDLNVAHNEIDLKNPKTNRKNAGFSDEERAKM-TELLGSGFTDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWR+DYF+ S+ + DK + I DV GSDH P+ + +
Sbjct: 190 YPDAEGIYSWWSYRFKAREKNAGWRIDYFITSKRINDKLQKAAIHTDVLGSDHCPVEVDI 249
Query: 181 KL 182
+
Sbjct: 250 EF 251
>gi|326790354|ref|YP_004308175.1| exodeoxyribonuclease III [Clostridium lentocellum DSM 5427]
gi|326541118|gb|ADZ82977.1| exodeoxyribonuclease III [Clostridium lentocellum DSM 5427]
Length = 251
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 129/182 (70%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLGI++HD+EGR++TAEF+ ++++ Y PN+ + L R+ YR+ W+ + +Y+
Sbjct: 72 EPLSVSYGLGIAEHDTEGRVITAEFEEAYVVTVYTPNAQNELARIDYRMA-WEDAFKAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE+ KPVI+ GDLN AHQEID+ NP NR +AGF+DEER FG L GF+DTFR
Sbjct: 131 KKLEENKPVIICGDLNVAHQEIDLKNPKTNRGNAGFSDEERGKFG-ELLEAGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR R+ N GWR+DYFL S+ L DK + I ++ GSDH P+ L +
Sbjct: 190 YPDLEGAYSWWSYRFKAREKNTGWRIDYFLASEVLKDKLVGAAIDAEILGSDHCPVILEI 249
Query: 181 KL 182
+
Sbjct: 250 NI 251
>gi|420414387|ref|ZP_14913507.1| exodeoxyribonuclease III [Helicobacter pylori NQ4099]
gi|393026721|gb|EJB27818.1| exodeoxyribonuclease III [Helicobacter pylori NQ4099]
Length = 250
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSDPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|257867352|ref|ZP_05647005.1| exodeoxyribonuclease [Enterococcus casseliflavus EC30]
gi|257873685|ref|ZP_05653338.1| exodeoxyribonuclease [Enterococcus casseliflavus EC10]
gi|257801408|gb|EEV30338.1| exodeoxyribonuclease [Enterococcus casseliflavus EC30]
gi|257807849|gb|EEV36671.1| exodeoxyribonuclease [Enterococcus casseliflavus EC10]
Length = 252
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 124/178 (69%), Gaps = 3/178 (1%)
Query: 4 LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKE 63
LSV YGLGI +HD+EGR++T E+ FFL++CY PNS + LRRL YR+T W+ + +Y+ E
Sbjct: 74 LSVRYGLGIEEHDTEGRVITLEYPEFFLITCYTPNSQNELRRLDYRMT-WEDAFLAYLTE 132
Query: 64 LEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHR 123
L+++KPVIL GDLN AH+ IDI N N++SAGFT EER+ F + L+ GF DTFR +
Sbjct: 133 LKQQKPVILCGDLNVAHKNIDIKNWKTNQKSAGFTPEEREKF-STLLAAGFTDTFRYFYP 191
Query: 124 GVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
G Y++W YR RK N GWR+DYF+VS L + D+ I D+ GSDH P+ L L
Sbjct: 192 DAEGIYSWWSYRFNARKNNAGWRIDYFVVSDDLNESLLDAKIHTDIIGSDHCPVELDL 249
>gi|420491640|ref|ZP_14990218.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-13]
gi|393104853|gb|EJC05407.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-13]
Length = 236
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 58 EPLSVSYGIDMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 116
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 117 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFN-ELLNAGFIDTFRYF 175
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 176 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 235
>gi|420473317|ref|ZP_14971995.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-19]
gi|420525338|ref|ZP_15023743.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-13b]
gi|393090445|gb|EJB91078.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-19]
gi|393130144|gb|EJC30574.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-13b]
Length = 250
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFN-ELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|384899763|ref|YP_005775143.1| exodeoxyribonuclease [Helicobacter pylori F30]
gi|317179707|dbj|BAJ57495.1| exodeoxyribonuclease [Helicobacter pylori F30]
Length = 250
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KVLELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|335045714|ref|ZP_08538737.1| exodeoxyribonuclease III [Oribacterium sp. oral taxon 108 str.
F0425]
gi|333759500|gb|EGL37057.1| exodeoxyribonuclease III [Oribacterium sp. oral taxon 108 str.
F0425]
Length = 251
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 126/181 (69%), Gaps = 2/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV+YG+G+ +HD EGR++TAEF F+L++ YVPNS L+RL YR+ E++ + SY+
Sbjct: 73 EPISVSYGIGVEEHDQEGRVITAEFKDFYLITVYVPNSQGELKRLPYRM-EFEDAFLSYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
LEKKKPV+ GDLN AH+EID+ NP N SAGF+DEER F + L G++D+FR
Sbjct: 132 LNLEKKKPVVYCGDLNVAHEEIDLKNPDTNHLSAGFSDEERAKF-SRVLDSGYLDSFRYF 190
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ Y++W YR R+ N GWR+DYF+VS+ L K H + I ++ GSDH P+ LIL
Sbjct: 191 YPEKEEYSWWSYRTKARERNVGWRIDYFVVSKKLEKKLHSASIHTEIMGSDHCPVELILD 250
Query: 182 L 182
L
Sbjct: 251 L 251
>gi|385227690|ref|YP_005787614.1| exodeoxyribonuclease III [Helicobacter pylori SNT49]
gi|344332603|gb|AEN17633.1| exodeoxyribonuclease III [Helicobacter pylori SNT49]
Length = 250
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|444374829|ref|ZP_21174132.1| exodeoxyribonuclease III [Helicobacter pylori A45]
gi|443620688|gb|ELT81131.1| exodeoxyribonuclease III [Helicobacter pylori A45]
Length = 250
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|373454216|ref|ZP_09546089.1| exodeoxyribonuclease III (xth) [Dialister succinatiphilus YIT
11850]
gi|371936051|gb|EHO63787.1| exodeoxyribonuclease III (xth) [Dialister succinatiphilus YIT
11850]
Length = 254
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 122/181 (67%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGRL+TA+F S +LL CY PNS GL RLSYR+T W+ ++ Y+
Sbjct: 75 EPLSVTYGLGIEEHDQEGRLITADFGSHYLLCCYTPNSQRGLARLSYRMT-WEKAMKEYM 133
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L +KPVIL GDLN AH++IDI NPA N ++AGFTDEER + L+ GF D+FR
Sbjct: 134 TKLAAEKPVILCGDLNVAHEDIDIANPASNHKNAGFTDEERGRM-TDLLAAGFTDSFRHL 192
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
H Y++W Y R+ N GWR+DYFLVS D + I D+ GSDH P+ L L
Sbjct: 193 HPDEKDAYSWWSYFAKARERNVGWRIDYFLVSSVWKDHIKGASIHSDILGSDHCPVELDL 252
Query: 181 K 181
+
Sbjct: 253 E 253
>gi|423598952|ref|ZP_17574952.1| exodeoxyribonuclease [Bacillus cereus VD078]
gi|401237222|gb|EJR43679.1| exodeoxyribonuclease [Bacillus cereus VD078]
Length = 252
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SVTYGLGI +HD EGR++T EF+ F++++ Y PNS GL RL YR+ +W+ +Y+
Sbjct: 73 EPISVTYGLGIEEHDQEGRVITLEFEDFYMITLYTPNSKRGLERLDYRM-KWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L +KK V+ GDLN AH+EID+ NP NR++ GF+DEER+ F L +GFVDT+R
Sbjct: 132 KRLNEKKSVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREQF-TRTLEEGFVDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + DK ++ I ++ GSDH P+ L
Sbjct: 191 YPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDKITEAKINSEIMGSDHCPVEL 248
>gi|163941424|ref|YP_001646308.1| exodeoxyribonuclease III Xth [Bacillus weihenstephanensis KBAB4]
gi|229012920|ref|ZP_04170085.1| Exodeoxyribonuclease [Bacillus mycoides DSM 2048]
gi|423661424|ref|ZP_17636593.1| exodeoxyribonuclease [Bacillus cereus VDM022]
gi|163863621|gb|ABY44680.1| exodeoxyribonuclease III Xth [Bacillus weihenstephanensis KBAB4]
gi|228748174|gb|EEL98034.1| Exodeoxyribonuclease [Bacillus mycoides DSM 2048]
gi|401301465|gb|EJS07054.1| exodeoxyribonuclease [Bacillus cereus VDM022]
Length = 252
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SVTYGLGI +HD EGR++T EF+ F++++ Y PNS GL RL YR+ +W+ +Y+
Sbjct: 73 EPISVTYGLGIEEHDQEGRVITLEFEDFYMITLYTPNSKRGLERLDYRM-KWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L +KK V+ GDLN AH+EID+ NP NR++ GF+DEER+ F L +GFVDT+R
Sbjct: 132 KRLNEKKSVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKF-TRTLEEGFVDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + DK ++ I ++ GSDH P+ L
Sbjct: 191 YPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDKITEAKINSEIMGSDHCPVEL 248
>gi|32266427|ref|NP_860459.1| exodeoxyribonuclease LexA [Helicobacter hepaticus ATCC 51449]
gi|32262477|gb|AAP77525.1| exodeoxyribonuclease LexA [Helicobacter hepaticus ATCC 51449]
Length = 252
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 121/181 (66%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P++V Y +GI+ HD EGR++TAE+ F+L++ Y PNS L RL YR+ +W+ ++V
Sbjct: 72 QPINVAYDMGITYHDKEGRIITAEYPHFYLVNVYTPNSKRELERLDYRM-KWEDDFRAFV 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE K VI+ GDLN AHQEID+ NP NRR+AGFTDEER A L GF+DTFR
Sbjct: 131 KNLENHKSVIICGDLNVAHQEIDLKNPKTNRRNAGFTDEERNKMSA-LLDAGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W Y R+ N GWR+DYFL SQSL D+ I P + GSDH P+GL L
Sbjct: 190 YPTLTGAYSWWSYMGKARENNTGWRIDYFLCSQSLTPSLKDANIYPHIFGSDHCPVGLEL 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|420513485|ref|ZP_15011963.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-2b]
gi|393155902|gb|EJC56173.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-2b]
Length = 250
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+D+ER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDKEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420499520|ref|ZP_14998076.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-26]
gi|393151722|gb|EJC52025.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-26]
Length = 250
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLNVSYGIDMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|217031877|ref|ZP_03437380.1| hypothetical protein HPB128_199g85 [Helicobacter pylori B128]
gi|298735503|ref|YP_003728024.1| exodeoxyribonuclease III [Helicobacter pylori B8]
gi|216946529|gb|EEC25131.1| hypothetical protein HPB128_199g85 [Helicobacter pylori B128]
gi|298354688|emb|CBI65560.1| exodeoxyribonuclease III [Helicobacter pylori B8]
Length = 250
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420407656|ref|ZP_14906820.1| exodeoxyribonuclease III [Helicobacter pylori CPY6311]
gi|393021114|gb|EJB22248.1| exodeoxyribonuclease III [Helicobacter pylori CPY6311]
Length = 250
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 119/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIDEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTLLKDALIYKDILGSDHCPVGLEL 249
>gi|187735459|ref|YP_001877571.1| exodeoxyribonuclease III Xth [Akkermansia muciniphila ATCC BAA-835]
gi|187425511|gb|ACD04790.1| exodeoxyribonuclease III Xth [Akkermansia muciniphila ATCC BAA-835]
Length = 253
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/179 (51%), Positives = 117/179 (65%), Gaps = 3/179 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++PLS + G+G +HD EGR+ T EF+ F+L++CY PNS + L RL YR +WD + Y
Sbjct: 73 VRPLSTSVGIGWPEHDREGRVCTMEFEGFYLVNCYTPNSQNELVRLPYR-EQWDAAFREY 131
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
V L + KPV+ GDLN AH+EIDI P NR SAGF+D+ER F L GF DTFRA
Sbjct: 132 VAGLAETKPVVFCGDLNVAHEEIDIARPKENRFSAGFSDQERAGFTL-LLEAGFTDTFRA 190
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
H G Y++W YR G R N GWR+DYF VS LA + D+ I PDVTGSDH P+ L
Sbjct: 191 LHPEEPGWYSWWSYRAGARARNIGWRIDYFCVSNPLASRVKDAAIHPDVTGSDHCPVSL 249
>gi|313114917|ref|ZP_07800415.1| exodeoxyribonuclease III [Faecalibacterium cf. prausnitzii KLE1255]
gi|310622794|gb|EFQ06251.1| exodeoxyribonuclease III [Faecalibacterium cf. prausnitzii KLE1255]
Length = 250
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 122/181 (67%), Gaps = 2/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVT G+GI HD EGR++T E+ F+L++CY PNS DGL+RL YR+ EW+ + +Y+
Sbjct: 72 QPLSVTTGIGIEQHDHEGRVLTLEYPGFWLVNCYTPNSQDGLKRLDYRM-EWEDAFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L+ KKPVIL GDLN AH+EIDI N N SAGFTD+ER L GF D+FR
Sbjct: 131 LALDAKKPVILCGDLNVAHREIDIKNDKTNHMSAGFTDQERGKM-TELLDAGFADSFRVL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
H V Y++W YR R+ N GWR+DYF+VS+ +ADK + I ++ GSDH P+ L +
Sbjct: 190 HPDEVKYSWWSYRFHAREKNAGWRIDYFIVSRRIADKIRAAEIHNEIFGSDHCPVELDID 249
Query: 182 L 182
L
Sbjct: 250 L 250
>gi|168209710|ref|ZP_02635335.1| exodeoxyribonuclease III [Clostridium perfringens B str. ATCC 3626]
gi|168217871|ref|ZP_02643496.1| exodeoxyribonuclease III [Clostridium perfringens NCTC 8239]
gi|170712212|gb|EDT24394.1| exodeoxyribonuclease III [Clostridium perfringens B str. ATCC 3626]
gi|182380111|gb|EDT77590.1| exodeoxyribonuclease III [Clostridium perfringens NCTC 8239]
Length = 250
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 125/181 (69%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V YG+ + HD EGR++T EF+ FF+++ Y PNS L RL YR+ EW+ +Y+
Sbjct: 72 EPLNVYYGINMEHHDKEGRVITLEFEDFFMVTVYTPNSQSELARLEYRM-EWEDDFRNYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL KK V++ GDLN AH+EID+ NP NR++AGFTDEER F + LS GF+DTFR
Sbjct: 131 LELSSKKGVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDKF-STLLSSGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR RK N GWR+DYFLVS +L D+ ++ I ++ GSDH P+ LI+
Sbjct: 190 NPDIEGVYSWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASIDTEILGSDHCPVKLIM 249
Query: 181 K 181
+
Sbjct: 250 E 250
>gi|160894365|ref|ZP_02075142.1| hypothetical protein CLOL250_01918 [Clostridium sp. L2-50]
gi|156864066|gb|EDO57497.1| exodeoxyribonuclease III [Clostridium sp. L2-50]
Length = 262
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 126/182 (69%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YG+GI +HD EGR++T E+D+F++++ Y PNS + L RL YR+ +W+ Y+
Sbjct: 83 EPLSVAYGIGIEEHDHEGRVITLEYDNFYMVTVYTPNSQNELARLDYRM-KWEDDFREYL 141
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE+ KPV++ GD+N AH EID+ NP NR++AGFTDEER+ F + L GFVDTFR
Sbjct: 142 KQLEQTKPVVVCGDMNVAHTEIDLKNPKTNRKNAGFTDEEREKF-STLLDSGFVDTFRFF 200
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWR+DYFL S+ L + D+ I +V GSDH P+ L +
Sbjct: 201 NPDAEGIYSWWSYRFKAREKNAGWRIDYFLTSKVLESRLVDAKIHTEVLGSDHCPVELDI 260
Query: 181 KL 182
L
Sbjct: 261 DL 262
>gi|220930682|ref|YP_002507591.1| exodeoxyribonuclease III Xth [Clostridium cellulolyticum H10]
gi|220001010|gb|ACL77611.1| exodeoxyribonuclease III Xth [Clostridium cellulolyticum H10]
Length = 253
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 126/182 (69%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP+S + G+GI +HD+EGR++T EFD +FL++ Y PNS L RL YR+ +W+ Y
Sbjct: 74 IKPVSSSCGIGIEEHDNEGRVITLEFDQYFLVNVYTPNSKRELERLEYRM-KWEDDFRIY 132
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K+LE+ KPVI+ GD+N AH+EIDI NP N+RSAGFT EER+ F + L +GFVD++R
Sbjct: 133 LKQLEETKPVIICGDMNVAHKEIDIKNPRSNKRSAGFTMEEREKF-SELLEQGFVDSYRT 191
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G YT+W Y R+ N GWR+DYF VS+ L + ++ I ++ GSDH P+GL
Sbjct: 192 LYPDKTGAYTWWSYMFKARERNVGWRIDYFCVSEVLKNIIEEADIYSEIMGSDHCPVGLT 251
Query: 180 LK 181
+K
Sbjct: 252 IK 253
>gi|420444585|ref|ZP_14943505.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-41]
gi|393058222|gb|EJB59115.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-41]
Length = 250
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDIKEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I ++ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKNILGSDHCPVGLEL 249
>gi|430362273|ref|ZP_19427003.1| exonuclease III [Enterococcus faecalis OG1X]
gi|430366851|ref|ZP_19427621.1| exonuclease III [Enterococcus faecalis M7]
gi|429512184|gb|ELA01799.1| exonuclease III [Enterococcus faecalis OG1X]
gi|429516857|gb|ELA06332.1| exonuclease III [Enterococcus faecalis M7]
Length = 271
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 124/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+ LSV YGLGI HD EGR++T E+ FF+++CY PNS L+RL+YR+T W+ + +Y+
Sbjct: 92 EALSVRYGLGIEAHDQEGRVITLEYPEFFMVTCYTPNSQAELKRLAYRMT-WEDAFRAYL 150
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL ++KPVIL GDLN AHQ+ID+ N N+++AGFT EERQ F L GF DTFR
Sbjct: 151 NELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKF-TELLDSGFTDTFRYF 209
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS+SL ++ + I D+ GSDH P+ ++L
Sbjct: 210 YPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDILGSDHCPVEVVL 269
>gi|332654136|ref|ZP_08419880.1| exodeoxyribonuclease III [Ruminococcaceae bacterium D16]
gi|332517222|gb|EGJ46827.1| exodeoxyribonuclease III [Ruminococcaceae bacterium D16]
Length = 252
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V YG+G +HD EGRL+T E++ F+L+ CY PNS L+RL YR+ EW+ L +Y+
Sbjct: 73 QPLAVRYGMGKEEHDHEGRLITLEYEKFYLVCCYTPNSQSELKRLDYRM-EWEDDLRAYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL+K KPVI GDLN AH+EID+ NP NR +AGFTD+ER+ LS GF DTFR
Sbjct: 132 MELDKVKPVIYCGDLNVAHREIDLKNPKTNRMNAGFTDQEREKM-TTLLSSGFTDTFRFL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR RK N GWR+DYF+VS L + + IL V GSDH P+ L L
Sbjct: 191 YPDLEGVYSWWSYRFQARKKNAGWRIDYFIVSDRLQNAIKRAEILTQVEGSDHCPVLLEL 250
Query: 181 KL 182
+
Sbjct: 251 DI 252
>gi|238922913|ref|YP_002936426.1| exodeoxyribonuclease [Eubacterium rectale ATCC 33656]
gi|238874585|gb|ACR74292.1| exodeoxyribonuclease [Eubacterium rectale ATCC 33656]
Length = 251
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+GI +HD EGR++T E+D+F+L++CY PNS + L+RL YR+ +W+ Y+
Sbjct: 72 EPLSVSYGIGIEEHDKEGRVITLEYDNFYLVTCYTPNSQNELKRLPYRM-QWEDDFREYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L+ KKPV+L GDLN AH EID+ NP NR++AGF+DEER L GF DTFR
Sbjct: 131 KTLDAKKPVVLCGDLNVAHNEIDLKNPKTNRKNAGFSDEERAKM-TELLGSGFTDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWR+DYF+ S+ + DK + I DV GSDH P+ + +
Sbjct: 190 YPDAEGIYSWWSYRFKAREKNAGWRIDYFITSKRINDKLKKAAIHTDVLGSDHCPVEVDI 249
Query: 181 KL 182
+
Sbjct: 250 EF 251
>gi|256763359|ref|ZP_05503939.1| exonuclease III [Enterococcus faecalis T3]
gi|256684610|gb|EEU24305.1| exonuclease III [Enterococcus faecalis T3]
Length = 257
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 124/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+ LSV YGLGI HD EGR++T E+ FF+++CY PNS L+RL+YR+T W+ + +Y+
Sbjct: 78 EALSVRYGLGIESHDQEGRVITLEYPEFFMVTCYTPNSQAELKRLAYRMT-WEDAFRAYL 136
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL ++KPVIL GDLN AHQ+ID+ N N+++AGFT EERQ F L GF DTFR
Sbjct: 137 NELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKF-TELLDSGFTDTFRYF 195
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS+SL ++ + I D+ GSDH P+ ++L
Sbjct: 196 YPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDILGSDHCPVEVVL 255
>gi|225548156|ref|ZP_03769441.1| hypothetical protein RUMHYD_00135 [Blautia hydrogenotrophica DSM
10507]
gi|225040687|gb|EEG50933.1| exodeoxyribonuclease III [Blautia hydrogenotrophica DSM 10507]
Length = 251
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 125/182 (68%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+GI +HD EGR++T E++ F+ ++ Y PNS + L RLSYR+ +W+ Y+
Sbjct: 72 EPLSVSYGIGIEEHDQEGRVITLEYEDFYFVTVYTPNSQNELARLSYRM-DWERDFLEYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+LE++KPV+ GDLN AHQEID+ NP NR++AGFTDEER F L GF+DTFR
Sbjct: 131 TKLEERKPVVWCGDLNVAHQEIDLKNPKTNRKNAGFTDEERACF-TKVLESGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWR+DYFLVS SL +K D+ I V GSDH P+ L +
Sbjct: 190 YPDQEGIYSWWSYRFRAREKNAGWRIDYFLVSSSLREKMVDAKIHTQVLGSDHCPVELDI 249
Query: 181 KL 182
L
Sbjct: 250 TL 251
>gi|30263740|ref|NP_846117.1| exodeoxyribonuclease III [Bacillus anthracis str. Ames]
gi|47529159|ref|YP_020508.1| exodeoxyribonuclease III [Bacillus anthracis str. 'Ames Ancestor']
gi|49186585|ref|YP_029837.1| exodeoxyribonuclease III [Bacillus anthracis str. Sterne]
gi|65321063|ref|ZP_00394022.1| COG0708: Exonuclease III [Bacillus anthracis str. A2012]
gi|118478961|ref|YP_896112.1| exodeoxyribonuclease III [Bacillus thuringiensis str. Al Hakam]
gi|165872421|ref|ZP_02217056.1| exodeoxyribonuclease III [Bacillus anthracis str. A0488]
gi|167639873|ref|ZP_02398142.1| exodeoxyribonuclease III [Bacillus anthracis str. A0193]
gi|170706859|ref|ZP_02897317.1| exodeoxyribonuclease III [Bacillus anthracis str. A0389]
gi|177652038|ref|ZP_02934584.1| exodeoxyribonuclease III [Bacillus anthracis str. A0174]
gi|190568466|ref|ZP_03021373.1| exodeoxyribonuclease III [Bacillus anthracis str. Tsiankovskii-I]
gi|196034121|ref|ZP_03101531.1| exodeoxyribonuclease III [Bacillus cereus W]
gi|196038388|ref|ZP_03105697.1| exodeoxyribonuclease III [Bacillus cereus NVH0597-99]
gi|196044665|ref|ZP_03111900.1| exodeoxyribonuclease III [Bacillus cereus 03BB108]
gi|218904866|ref|YP_002452700.1| exodeoxyribonuclease III [Bacillus cereus AH820]
gi|225865717|ref|YP_002751095.1| exodeoxyribonuclease III [Bacillus cereus 03BB102]
gi|227813360|ref|YP_002813369.1| exodeoxyribonuclease III [Bacillus anthracis str. CDC 684]
gi|228916370|ref|ZP_04079939.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228928786|ref|ZP_04091820.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228935036|ref|ZP_04097866.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228947401|ref|ZP_04109692.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|229092775|ref|ZP_04223913.1| Exodeoxyribonuclease [Bacillus cereus Rock3-42]
gi|229123254|ref|ZP_04252458.1| Exodeoxyribonuclease [Bacillus cereus 95/8201]
gi|229185967|ref|ZP_04313138.1| Exodeoxyribonuclease [Bacillus cereus BGSC 6E1]
gi|229603277|ref|YP_002867975.1| exodeoxyribonuclease III [Bacillus anthracis str. A0248]
gi|254721165|ref|ZP_05182956.1| exodeoxyribonuclease III [Bacillus anthracis str. A1055]
gi|254735775|ref|ZP_05193481.1| exodeoxyribonuclease III [Bacillus anthracis str. Western North
America USA6153]
gi|254751095|ref|ZP_05203134.1| exodeoxyribonuclease III [Bacillus anthracis str. Vollum]
gi|254759412|ref|ZP_05211437.1| exodeoxyribonuclease III [Bacillus anthracis str. Australia 94]
gi|376267630|ref|YP_005120342.1| Exodeoxyribonuclease III [Bacillus cereus F837/76]
gi|386737557|ref|YP_006210738.1| Exodeoxyribonuclease III [Bacillus anthracis str. H9401]
gi|421510574|ref|ZP_15957465.1| exodeoxyribonuclease III [Bacillus anthracis str. UR-1]
gi|30258384|gb|AAP27603.1| exodeoxyribonuclease III [Bacillus anthracis str. Ames]
gi|47504307|gb|AAT32983.1| exodeoxyribonuclease III [Bacillus anthracis str. 'Ames Ancestor']
gi|49180512|gb|AAT55888.1| exodeoxyribonuclease III [Bacillus anthracis str. Sterne]
gi|118418186|gb|ABK86605.1| exodeoxyribonuclease III [Bacillus thuringiensis str. Al Hakam]
gi|164711859|gb|EDR17401.1| exodeoxyribonuclease III [Bacillus anthracis str. A0488]
gi|167512274|gb|EDR87651.1| exodeoxyribonuclease III [Bacillus anthracis str. A0193]
gi|170128277|gb|EDS97146.1| exodeoxyribonuclease III [Bacillus anthracis str. A0389]
gi|172082407|gb|EDT67472.1| exodeoxyribonuclease III [Bacillus anthracis str. A0174]
gi|190560470|gb|EDV14448.1| exodeoxyribonuclease III [Bacillus anthracis str. Tsiankovskii-I]
gi|195993195|gb|EDX57153.1| exodeoxyribonuclease III [Bacillus cereus W]
gi|196024700|gb|EDX63372.1| exodeoxyribonuclease III [Bacillus cereus 03BB108]
gi|196030796|gb|EDX69394.1| exodeoxyribonuclease III [Bacillus cereus NVH0597-99]
gi|218539943|gb|ACK92341.1| exodeoxyribonuclease III [Bacillus cereus AH820]
gi|225789176|gb|ACO29393.1| exodeoxyribonuclease III [Bacillus cereus 03BB102]
gi|227006454|gb|ACP16197.1| exodeoxyribonuclease III [Bacillus anthracis str. CDC 684]
gi|228597519|gb|EEK55168.1| Exodeoxyribonuclease [Bacillus cereus BGSC 6E1]
gi|228660030|gb|EEL15666.1| Exodeoxyribonuclease [Bacillus cereus 95/8201]
gi|228690573|gb|EEL44354.1| Exodeoxyribonuclease [Bacillus cereus Rock3-42]
gi|228812254|gb|EEM58584.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228824606|gb|EEM70408.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228830871|gb|EEM76474.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228843280|gb|EEM88359.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229267685|gb|ACQ49322.1| exodeoxyribonuclease III [Bacillus anthracis str. A0248]
gi|364513430|gb|AEW56829.1| Exodeoxyribonuclease III [Bacillus cereus F837/76]
gi|384387409|gb|AFH85070.1| Exodeoxyribonuclease III [Bacillus anthracis str. H9401]
gi|401819394|gb|EJT18573.1| exodeoxyribonuclease III [Bacillus anthracis str. UR-1]
Length = 252
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGR++T EF+ F++++ Y PNS GL RL YR+ +W+ +Y+
Sbjct: 73 EPLSVTYGLGIEEHDQEGRVITLEFEDFYIITLYTPNSKRGLERLEYRM-KWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KK V+ GDLN AH+EID+ NP NR++ GF+DEER+ F L +GF+DT+R
Sbjct: 132 KRLDEKKSVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTC-ILEEGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + D+ + I +V GSDH P+ L
Sbjct: 191 YPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITAAKINSEVMGSDHCPVEL 248
>gi|420504982|ref|ZP_15003506.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-62]
gi|393154128|gb|EJC54413.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-62]
Length = 250
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RL+YR++ W+ ++
Sbjct: 72 EPLSVSYGIDMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLNYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|420469789|ref|ZP_14968500.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-11]
gi|393086835|gb|EJB87505.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-11]
Length = 250
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTCLKDALIYKDILGSDHCPVGLEL 249
>gi|49478354|ref|YP_037804.1| exodeoxyribonuclease III [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|301055229|ref|YP_003793440.1| exodeoxyribonuclease III [Bacillus cereus biovar anthracis str. CI]
gi|423550511|ref|ZP_17526838.1| exodeoxyribonuclease III (xth) [Bacillus cereus ISP3191]
gi|49329910|gb|AAT60556.1| exodeoxyribonuclease III [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|300377398|gb|ADK06302.1| exodeoxyribonuclease III [Bacillus cereus biovar anthracis str. CI]
gi|401190127|gb|EJQ97177.1| exodeoxyribonuclease III (xth) [Bacillus cereus ISP3191]
Length = 252
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGR++T EF+ F++++ Y PNS GL RL YR+ +W+ +Y+
Sbjct: 73 EPLSVTYGLGIEEHDQEGRVITLEFEDFYIITLYTPNSKRGLERLEYRM-KWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KK V+ GDLN AH+EID+ NP NR++ GF+DEER+ F L +GF+DT+R
Sbjct: 132 KRLDEKKSVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTC-ILEEGFIDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR G R N GWRLDYF+VS+ + D+ + I +V GSDH P+ L
Sbjct: 191 YPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITAAKINSEVMGSDHCPVEL 248
>gi|329768092|ref|ZP_08259601.1| exodeoxyribonuclease III [Gemella haemolysans M341]
gi|328838247|gb|EGF87859.1| exodeoxyribonuclease III [Gemella haemolysans M341]
Length = 254
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 123/181 (67%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P++VTYG+GI +HD+EGR++T E+D FF ++ Y PNSG L+RL YR++ W+ +Y+
Sbjct: 72 EPINVTYGIGIEEHDTEGRVITLEYDKFFFITVYTPNSGSELKRLEYRMS-WEEDFKNYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL K K +++ GDLN AH EID+ NP N ++AGFT EER+ F L GF+DTFR
Sbjct: 131 LELNKTKGIVVCGDLNVAHTEIDLKNPKSNTKNAGFTQEEREKF-TKLLDAGFIDTFRYY 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR RK N GWR+DYFLVS+ L + I ++ GSDH P+ L+L
Sbjct: 190 NPDLTGAYSWWSYRFNARKNNAGWRIDYFLVSRDLEKYLESAAIHNEIFGSDHCPVELVL 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|420429441|ref|ZP_14928474.1| exodeoxyribonuclease III [Helicobacter pylori Hp A-17]
gi|393044771|gb|EJB45763.1| exodeoxyribonuclease III [Helicobacter pylori Hp A-17]
Length = 250
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLNVSYGIDIKEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KVLELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|348027153|ref|YP_004766958.1| exodeoxyribonuclease III [Megasphaera elsdenii DSM 20460]
gi|341823207|emb|CCC74131.1| exodeoxyribonuclease III [Megasphaera elsdenii DSM 20460]
Length = 254
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+ PLSV YG+GI +HD EGRL+T EF ++ ++CY PNS L RL YR+ +W+ Y
Sbjct: 75 LAPLSVRYGMGIDEHDHEGRLITLEFPDYYFVTCYTPNSQSELARLPYRM-KWEDDFRQY 133
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ +L ++KPVI+ GDLN AH+EID+ NP NR++AGF+DEERQ + L+ GF DT+R
Sbjct: 134 LLDLHQEKPVIVCGDLNVAHEEIDLKNPKTNRKNAGFSDEERQKM-TDLLAAGFTDTWRY 192
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ V G Y++W YR R+ N GWR+DYFL ++ L + + I D+TGSDH P+GL
Sbjct: 193 FYPDVTGVYSWWSYRFKARQNNAGWRIDYFLTTKDLDSRLAKASIYTDITGSDHCPVGLE 252
Query: 180 LK 181
LK
Sbjct: 253 LK 254
>gi|373851837|ref|ZP_09594637.1| exodeoxyribonuclease III Xth [Opitutaceae bacterium TAV5]
gi|391230369|ref|ZP_10266575.1| exodeoxyribonuclease III [Opitutaceae bacterium TAV1]
gi|372474066|gb|EHP34076.1| exodeoxyribonuclease III Xth [Opitutaceae bacterium TAV5]
gi|391220030|gb|EIP98450.1| exodeoxyribonuclease III [Opitutaceae bacterium TAV1]
Length = 251
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 125/181 (69%), Gaps = 2/181 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++P++V+ GLG+ DHD+EGR++TAEF F+L++ YVPN+ L RL YR W+ SY
Sbjct: 73 VEPVAVSCGLGLPDHDNEGRVLTAEFADFYLVNVYVPNAQHELVRLPYR-RRWNADFLSY 131
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++ LEKKKPV++ GD+N AHQEID+ P N +AGF++EER+ F + L GFVDTFR
Sbjct: 132 LRSLEKKKPVVVCGDMNVAHQEIDLARPKENVGNAGFSNEEREDF-STMLRAGFVDTFRE 190
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+G Y++W YR G R N GWR+DYFL S +L + ++I P V GSDH P+GL L
Sbjct: 191 FEKGPGHYSWWTYRAGARGRNIGWRIDYFLASAALRPRLKRAWIEPTVMGSDHCPVGLEL 250
Query: 181 K 181
K
Sbjct: 251 K 251
>gi|420459312|ref|ZP_14958114.1| exodeoxyribonuclease III [Helicobacter pylori Hp A-26]
gi|393072002|gb|EJB72782.1| exodeoxyribonuclease III [Helicobacter pylori Hp A-26]
Length = 250
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L + D+ I ++ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKNILGSDHCPVGLEL 249
>gi|421715822|ref|ZP_16155136.1| exodeoxyribonuclease III [Helicobacter pylori R036d]
gi|407214330|gb|EKE84179.1| exodeoxyribonuclease III [Helicobacter pylori R036d]
Length = 250
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTHLKDALIYKDILGSDHCPVGLEL 249
>gi|374308939|ref|YP_005055370.1| exodeoxyribonuclease III [Filifactor alocis ATCC 35896]
gi|291165919|gb|EFE27966.1| exodeoxyribonuclease III [Filifactor alocis ATCC 35896]
Length = 251
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 121/178 (67%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLGI +HD EGR++T EFD+F++++ Y PNS + L RL YR+ W+ SY+
Sbjct: 72 EPLSVSYGLGIEEHDQEGRVITLEFDNFYMVTVYTPNSKNELLRLDYRMV-WEDEFRSYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L + KPVI+ GDLN AHQEID+ NP N+++AGFT EER + L GF+DTFR
Sbjct: 131 LRLNETKPVIVCGDLNVAHQEIDLKNPKTNQKNAGFTIEERTKM-STLLDSGFIDTFRFF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ + G Y++W YR RK N GWR+DYFL SQ L + D+ I D+ GSDH P+ L
Sbjct: 190 YPELEGAYSWWSYRFNARKNNAGWRIDYFLTSQELKENLKDAKIHSDILGSDHCPVEL 247
>gi|385249934|ref|YP_005778153.1| exodeoxyribonuclease [Helicobacter pylori F57]
gi|420402627|ref|ZP_14901815.1| exodeoxyribonuclease III [Helicobacter pylori CPY6081]
gi|317182729|dbj|BAJ60513.1| exodeoxyribonuclease [Helicobacter pylori F57]
gi|393016094|gb|EJB17254.1| exodeoxyribonuclease III [Helicobacter pylori CPY6081]
Length = 250
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 119/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTHLKDALIYKDILGSDHCPVGLEL 249
>gi|422694022|ref|ZP_16752027.1| exodeoxyribonuclease III [Enterococcus faecalis TX4244]
gi|315148697|gb|EFT92713.1| exodeoxyribonuclease III [Enterococcus faecalis TX4244]
Length = 251
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 124/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+ LSV YGLGI HD EGR++T E+ FF+++CY PNS L+RL+YR+T W+ + +Y+
Sbjct: 72 EALSVRYGLGIESHDQEGRVITLEYPEFFMVTCYTPNSQAELKRLAYRMT-WEDAFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL ++KPVIL GDLN AHQ+ID+ N N+++AGFT EERQ F L GF DTFR
Sbjct: 131 NELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKF-TELLDSGFTDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS+SL ++ + I D+ GSDH P+ ++L
Sbjct: 190 YPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDILGSDHCPVEVVL 249
>gi|423522432|ref|ZP_17498905.1| exodeoxyribonuclease [Bacillus cereus HuA4-10]
gi|401175126|gb|EJQ82329.1| exodeoxyribonuclease [Bacillus cereus HuA4-10]
Length = 252
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 123/178 (69%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLGI +HD EGR++T EF+ F++++ Y PNS GL RL YR+ EW+ +Y+
Sbjct: 73 EPLSVTYGLGIEEHDQEGRVITLEFEDFYMITLYTPNSKRGLERLDYRM-EWEDDFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AH+EID+ NP NR++ GF+DEER+ F L GFVDT+R
Sbjct: 132 KRLDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTLA-LEGGFVDTYRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W Y G R N GWRLDYF+VS+ + + D+ I +V GSDH P+ L
Sbjct: 191 YPNQEGAYSWWSYLMGARAKNIGWRLDYFVVSERIKGQIIDAKINSEVMGSDHCPVEL 248
>gi|420434804|ref|ZP_14933804.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-27]
gi|420503423|ref|ZP_15001957.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-41]
gi|420505338|ref|ZP_15003854.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-74]
gi|393052572|gb|EJB53518.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-27]
gi|393116870|gb|EJC17374.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-74]
gi|393149519|gb|EJC49829.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-41]
Length = 250
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|339443513|ref|YP_004709518.1| hypothetical protein CXIVA_24490 [Clostridium sp. SY8519]
gi|338902914|dbj|BAK48416.1| hypothetical protein CXIVA_24490 [Clostridium sp. SY8519]
Length = 289
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 125/180 (69%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLGI HD EGR++T E+++F+ ++ Y PNS L+RL YR+ EW+ +Y+
Sbjct: 111 EPLSVSYGLGIEAHDQEGRVITLEYETFYFVTVYTPNSQSELKRLDYRM-EWEDDFRAYL 169
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L+++KPVI+ GD+N AHQEID+ NP NR++AGFTDEERQ F L G++DT+R
Sbjct: 170 TGLDREKPVIVCGDMNVAHQEIDLKNPKTNRKNAGFTDEERQKF-TELLDSGWIDTWRYF 228
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWR+DYFLVS L D+ D+ I +V GSDH P+ L L
Sbjct: 229 YPDQEGVYSWWSYRFKAREKNAGWRIDYFLVSDRLKDRLTDAKIHTEVMGSDHCPVELDL 288
>gi|319954545|ref|YP_004165812.1| exodeoxyribonuclease iii xth [Cellulophaga algicola DSM 14237]
gi|319423205|gb|ADV50314.1| exodeoxyribonuclease III Xth [Cellulophaga algicola DSM 14237]
Length = 254
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 119/181 (65%), Gaps = 3/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
P+S T +GI HD+EGR++ E+DSF+L++ YVPNSG L RL YR +WD +Y+K
Sbjct: 76 PISATPNMGIEVHDTEGRILCTEYDSFYLVNVYVPNSGQKLDRLEYR-QQWDKDFLAYLK 134
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGN-RRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
LEKKKPVI GD N AHQ ID+ N N ++AG+T E NF++ FVD+FRA
Sbjct: 135 NLEKKKPVIACGDFNVAHQAIDLKNDKANYNKTAGYTQIEIDGMD-NFIANDFVDSFRAL 193
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
H V YT+W YR R+ N GWR+DYFLVS+++ADK I D+ GSDH PIG+ L
Sbjct: 194 HPDEVAYTFWSYRFKSRERNTGWRIDYFLVSKAIADKIKKVTIYADIMGSDHCPIGITLS 253
Query: 182 L 182
+
Sbjct: 254 I 254
>gi|255974862|ref|ZP_05425448.1| exonuclease III [Enterococcus faecalis T2]
gi|255967734|gb|EET98356.1| exonuclease III [Enterococcus faecalis T2]
Length = 257
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 124/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+ LSV YGLGI HD EGR++T E+ FF+++CY PNS L+RL+YR+T W+ + +Y+
Sbjct: 78 EALSVRYGLGIEAHDQEGRVITLEYPEFFMVTCYTPNSQAELKRLAYRMT-WEDAFRAYL 136
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL ++KPVIL GDLN AHQ+ID+ N N+++AGFT EERQ F L GF DTFR
Sbjct: 137 NELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKF-TELLDSGFTDTFRYF 195
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS+SL ++ + I D+ GSDH P+ ++L
Sbjct: 196 YPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDILGSDHCPVEVVL 255
>gi|420420653|ref|ZP_14919737.1| exodeoxyribonuclease III [Helicobacter pylori NQ4161]
gi|393035452|gb|EJB36496.1| exodeoxyribonuclease III [Helicobacter pylori NQ4161]
Length = 250
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR++T EF+SF+L++ Y PNS L RLSYR+ W+ ++
Sbjct: 72 EPLSVSYGIDMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMN-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARNKDIGWRIDYFLCSNPLKTRLKDALIYKDTLGSDHCPVGLEL 249
>gi|257079900|ref|ZP_05574261.1| exonuclease III [Enterococcus faecalis JH1]
gi|294779916|ref|ZP_06745298.1| exodeoxyribonuclease III [Enterococcus faecalis PC1.1]
gi|307269235|ref|ZP_07550589.1| exodeoxyribonuclease III [Enterococcus faecalis TX4248]
gi|397700923|ref|YP_006538711.1| exodeoxyribonuclease III [Enterococcus faecalis D32]
gi|422866830|ref|ZP_16913440.1| exodeoxyribonuclease III [Enterococcus faecalis TX1467]
gi|256987930|gb|EEU75232.1| exonuclease III [Enterococcus faecalis JH1]
gi|294453028|gb|EFG21448.1| exodeoxyribonuclease III [Enterococcus faecalis PC1.1]
gi|306514454|gb|EFM83015.1| exodeoxyribonuclease III [Enterococcus faecalis TX4248]
gi|329578016|gb|EGG59431.1| exodeoxyribonuclease III [Enterococcus faecalis TX1467]
gi|397337562|gb|AFO45234.1| exodeoxyribonuclease III [Enterococcus faecalis D32]
Length = 251
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 123/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+ LSV YGLGI HD EGR++T E+ FF+++CY PNS L+RL+YR+T W+ + +Y+
Sbjct: 72 EALSVRYGLGIEAHDQEGRMITLEYPEFFMVTCYTPNSQAELKRLAYRMT-WEDAFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL ++KPVIL GDLN AHQ ID+ N N+++AGFT EERQ F L GF DTFR
Sbjct: 131 NELNQEKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQKF-TELLDSGFTDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS+SL ++ + I D+ GSDH P+ ++L
Sbjct: 190 YPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDILGSDHCPVEVVL 249
>gi|350565008|ref|ZP_08933806.1| exodeoxyribonuclease III [Peptoniphilus indolicus ATCC 29427]
gi|348664197|gb|EGY80712.1| exodeoxyribonuclease III [Peptoniphilus indolicus ATCC 29427]
Length = 250
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KP+SVTYG+GI +HD+EGR++T EF+ ++ ++CY PNS L RL YR+ W+ + +Y
Sbjct: 71 LKPISVTYGIGIEEHDTEGRVITLEFEDYYFITCYTPNSKRKLERLDYRVV-WEDAFRNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ EL+K KP++L GDLN AH EID+ NP N +SAGF+DEER F L+ G+VDTFR
Sbjct: 130 LNELDKNKPIVLCGDLNVAHNEIDLANPDTNHKSAGFSDEERAKF-TELLASGYVDTFRH 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ Y++W + R+ N GWR+DYF+VS+ D+ DS I V GSDH P+ +I
Sbjct: 189 FYPDRADEYSWWSNFNKARERNIGWRIDYFVVSERFLDRIEDSKIHQSVMGSDHCPVEII 248
Query: 180 LK 181
LK
Sbjct: 249 LK 250
>gi|325299788|ref|YP_004259705.1| exodeoxyribonuclease III Xth [Bacteroides salanitronis DSM 18170]
gi|324319341|gb|ADY37232.1| exodeoxyribonuclease III Xth [Bacteroides salanitronis DSM 18170]
Length = 251
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/184 (47%), Positives = 128/184 (69%), Gaps = 7/184 (3%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V+YG+GI +HD EGR++T E ++F+L++ Y PNS DGL+RL YR+T W+ + Y+
Sbjct: 72 QPLNVSYGMGIDEHDREGRVITLEMENFYLVTVYTPNSQDGLKRLDYRMT-WEDAFRRYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFR-- 119
EL+ KKPV++ GDLN AH+EID+ NP NR +AGFTD+ER+ F L GF+DTFR
Sbjct: 131 LELDAKKPVLVCGDLNVAHKEIDLKNPKTNRMNAGFTDQEREKF-QTLLDAGFIDTFRYF 189
Query: 120 -AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G+ Y++W YR R+ N GWR+DYFL S LA K + I ++ GSDH P+ +
Sbjct: 190 YPEQEGI--YSWWSYRFRAREKNAGWRIDYFLASARLAGKLESAAIHTEIFGSDHCPVEV 247
Query: 179 ILKL 182
+++
Sbjct: 248 CVRI 251
>gi|384891873|ref|YP_005766006.1| Exo deoxyribonuclease III [Helicobacter pylori 908]
gi|385224548|ref|YP_005784474.1| Exodeoxyribonuclease III [Helicobacter pylori 2017]
gi|385232401|ref|YP_005792320.1| Exodeoxyribonuclease III [Helicobacter pylori 2018]
gi|307638182|gb|ADN80632.1| Exo deoxyribonuclease III [Helicobacter pylori 908]
gi|325996778|gb|ADZ52183.1| Exodeoxyribonuclease III [Helicobacter pylori 2018]
gi|325998370|gb|ADZ50578.1| Exodeoxyribonuclease III [Helicobacter pylori 2017]
Length = 250
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEMEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 131 KVLELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERKKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|312898827|ref|ZP_07758215.1| exodeoxyribonuclease III [Megasphaera micronuciformis F0359]
gi|310619989|gb|EFQ03561.1| exodeoxyribonuclease III [Megasphaera micronuciformis F0359]
Length = 250
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPLSV+YG+ I +HD EGRL+T EF+ F+ ++CY PNS L RL YR+ W+ +Y
Sbjct: 71 IKPLSVSYGMNIDEHDHEGRLITLEFEDFYFITCYTPNSQSELARLDYRM-RWEDDFRNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
V EL + KPVI GDLN AH+EID+ NP NR++AGF+DEER L+ GF DT+R
Sbjct: 130 VTELNRTKPVIFCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKM-TELLAAGFTDTWRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G Y++W YR R+ N GWR+DYF+ S +L + ++ I ++ GSDH P+GL+
Sbjct: 189 FYPDKEGVYSWWSYRFKARQNNSGWRIDYFITSSALDSRLKEALIYTNIEGSDHCPVGLV 248
Query: 180 LK 181
++
Sbjct: 249 IE 250
>gi|420478325|ref|ZP_14976978.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-34]
gi|393097099|gb|EJB97693.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-34]
Length = 250
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V+YG+ + +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLNVSYGIDMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|451343821|ref|ZP_21912887.1| exodeoxyribonuclease III (xth) [Eggerthia catenaformis OT 569 = DSM
20559]
gi|449337396|gb|EMD16558.1| exodeoxyribonuclease III (xth) [Eggerthia catenaformis OT 569 = DSM
20559]
Length = 251
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/183 (49%), Positives = 121/183 (66%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP V YG+ I +HD EGR++T EFD F+ + CY PNS L RL YR+ +W+ +Y
Sbjct: 71 IKPNHVYYGIDIKEHDQEGRVLTLEFDHFYFVGCYTPNSKRELARLDYRM-KWEDDFLAY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ +L K KPVIL GDLN AHQEID+ NP+ N ++AGF+DEER+ LS G++DTFR
Sbjct: 130 LDKLNKTKPVILCGDLNVAHQEIDLKNPSSNHKNAGFSDEEREKM-TQLLSHGYIDTFRY 188
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ Y++W Y R+ N GWR+DYF+ S+ L DK D+YI D+ GSDH P+GL
Sbjct: 189 FYPDQTDAYSWWSYMFKARERNAGWRIDYFITSERLKDKLKDAYIYSDILGSDHCPVGLE 248
Query: 180 LKL 182
+ L
Sbjct: 249 ISL 251
>gi|422696461|ref|ZP_16754419.1| exodeoxyribonuclease III [Enterococcus faecalis TX1346]
gi|315174931|gb|EFU18948.1| exodeoxyribonuclease III [Enterococcus faecalis TX1346]
Length = 251
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 124/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+ LSV YGLGI HD EGR++T E+ FF+++CY PNS L+RL+YR+T W+ + +Y+
Sbjct: 72 EALSVRYGLGIEAHDQEGRVITLEYPEFFMVTCYTPNSQAELKRLAYRMT-WEDAFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL ++KPVIL GDLN AHQ+ID+ N N+++AGFT EERQ F L GF DTFR
Sbjct: 131 NELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKF-TELLDSGFTDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS+SL ++ + I D+ GSDH P+ ++L
Sbjct: 190 YPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDILGSDHCPVEVVL 249
>gi|384888368|ref|YP_005762879.1| exodeoxyribonuclease [Helicobacter pylori 52]
gi|261840198|gb|ACX99963.1| exodeoxyribonuclease [Helicobacter pylori 52]
Length = 250
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR+VT EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINIDEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|334319618|ref|XP_001379263.2| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like
[Monodelphis domestica]
Length = 320
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 118/181 (65%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PLSVTYG+G +HD EGR++ AEF++F L++ YVPN+G GL RL YR WD + ++K
Sbjct: 141 PLSVTYGIGEEEHDQEGRVIVAEFEAFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 199
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L KKP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 200 GLSAKKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLTDSFRHLY 259
Query: 123 -RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+SQ+L DS I GSDH PI L+L
Sbjct: 260 PEAAYAYTFWTYMMNARAKNVGWRLDYFLLSQALLPALCDSKIRSKALGSDHCPITLLLA 319
Query: 182 L 182
L
Sbjct: 320 L 320
>gi|229544881|ref|ZP_04433606.1| exodeoxyribonuclease [Enterococcus faecalis TX1322]
gi|256963841|ref|ZP_05568012.1| exonuclease III [Enterococcus faecalis HIP11704]
gi|257081702|ref|ZP_05576063.1| exonuclease III [Enterococcus faecalis E1Sol]
gi|257087702|ref|ZP_05582063.1| exonuclease III [Enterococcus faecalis D6]
gi|257416904|ref|ZP_05593898.1| exonuclease III [Enterococcus faecalis ARO1/DG]
gi|257421653|ref|ZP_05598643.1| exodeoxyribonuclease [Enterococcus faecalis X98]
gi|307271787|ref|ZP_07553058.1| exodeoxyribonuclease III [Enterococcus faecalis TX0855]
gi|307278718|ref|ZP_07559785.1| exodeoxyribonuclease III [Enterococcus faecalis TX0860]
gi|307288645|ref|ZP_07568626.1| exodeoxyribonuclease III [Enterococcus faecalis TX0109]
gi|384514063|ref|YP_005709156.1| exodeoxyribonuclease III [Enterococcus faecalis OG1RF]
gi|422703204|ref|ZP_16761029.1| exodeoxyribonuclease III [Enterococcus faecalis TX1302]
gi|422707239|ref|ZP_16764936.1| exodeoxyribonuclease III [Enterococcus faecalis TX0043]
gi|422720136|ref|ZP_16776759.1| exodeoxyribonuclease III [Enterococcus faecalis TX0017]
gi|422724491|ref|ZP_16780967.1| exodeoxyribonuclease III [Enterococcus faecalis TX2137]
gi|422734487|ref|ZP_16790776.1| exodeoxyribonuclease III [Enterococcus faecalis TX1341]
gi|422741447|ref|ZP_16795472.1| exodeoxyribonuclease III [Enterococcus faecalis TX2141]
gi|424672083|ref|ZP_18109064.1| exodeoxyribonuclease III [Enterococcus faecalis 599]
gi|229309982|gb|EEN75969.1| exodeoxyribonuclease [Enterococcus faecalis TX1322]
gi|256954337|gb|EEU70969.1| exonuclease III [Enterococcus faecalis HIP11704]
gi|256989732|gb|EEU77034.1| exonuclease III [Enterococcus faecalis E1Sol]
gi|256995732|gb|EEU83034.1| exonuclease III [Enterococcus faecalis D6]
gi|257158732|gb|EEU88692.1| exonuclease III [Enterococcus faecalis ARO1/DG]
gi|257163477|gb|EEU93437.1| exodeoxyribonuclease [Enterococcus faecalis X98]
gi|295113675|emb|CBL32312.1| exodeoxyribonuclease III [Enterococcus sp. 7L76]
gi|306500399|gb|EFM69735.1| exodeoxyribonuclease III [Enterococcus faecalis TX0109]
gi|306504579|gb|EFM73782.1| exodeoxyribonuclease III [Enterococcus faecalis TX0860]
gi|306511665|gb|EFM80664.1| exodeoxyribonuclease III [Enterococcus faecalis TX0855]
gi|315025498|gb|EFT37430.1| exodeoxyribonuclease III [Enterococcus faecalis TX2137]
gi|315032586|gb|EFT44518.1| exodeoxyribonuclease III [Enterococcus faecalis TX0017]
gi|315143871|gb|EFT87887.1| exodeoxyribonuclease III [Enterococcus faecalis TX2141]
gi|315155597|gb|EFT99613.1| exodeoxyribonuclease III [Enterococcus faecalis TX0043]
gi|315165304|gb|EFU09321.1| exodeoxyribonuclease III [Enterococcus faecalis TX1302]
gi|315168718|gb|EFU12735.1| exodeoxyribonuclease III [Enterococcus faecalis TX1341]
gi|327535952|gb|AEA94786.1| exodeoxyribonuclease III [Enterococcus faecalis OG1RF]
gi|402357128|gb|EJU91842.1| exodeoxyribonuclease III [Enterococcus faecalis 599]
Length = 251
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 124/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+ LSV YGLGI HD EGR++T E+ FF+++CY PNS L+RL+YR+T W+ + +Y+
Sbjct: 72 EALSVRYGLGIEAHDQEGRVITLEYPEFFMVTCYTPNSQAELKRLAYRMT-WEDAFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL ++KPVIL GDLN AHQ+ID+ N N+++AGFT EERQ F L GF DTFR
Sbjct: 131 NELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKF-TELLDSGFTDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS+SL ++ + I D+ GSDH P+ ++L
Sbjct: 190 YPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDILGSDHCPVEVVL 249
>gi|210135690|ref|YP_002302129.1| exodeoxyribonuclease III [Helicobacter pylori P12]
gi|210133658|gb|ACJ08649.1| exodeoxyribonuclease [Helicobacter pylori P12]
Length = 250
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 119/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YG+ + +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVNYGINMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYFL S L D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTCLKDALIYKDILGSDHCPVGLEL 249
>gi|377809183|ref|YP_005004404.1| exodeoxyribonuclease III [Pediococcus claussenii ATCC BAA-344]
gi|361055924|gb|AEV94728.1| exodeoxyribonuclease III [Pediococcus claussenii ATCC BAA-344]
Length = 251
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 125/182 (68%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VTYG+GI ++D+EGR++T E+ ++++++CY PNS L+RL YR++ W+ + +YV
Sbjct: 72 KPLNVTYGIGIEEYDTEGRIITLEYANYYVITCYTPNSQPKLKRLEYRMS-WEDAFKNYV 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+K KPVI GDLN AH EID+ NP N ++AGF+D+ER F L GF DTFR
Sbjct: 131 DQLKKDKPVIFCGDLNVAHNEIDLKNPKTNHKNAGFSDQERAKF-TELLQSGFTDTFRHF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR RK N GWR+DYF+ S L DK D+ I ++ GSDH P+ L +
Sbjct: 190 YPDLTGIYSWWSYRFNARKNNAGWRIDYFVTSNDLDDKLKDAKIHTEIFGSDHCPVELDI 249
Query: 181 KL 182
L
Sbjct: 250 DL 251
>gi|168214660|ref|ZP_02640285.1| exodeoxyribonuclease III [Clostridium perfringens CPE str. F4969]
gi|422874042|ref|ZP_16920527.1| exodeoxyribonuclease III [Clostridium perfringens F262]
gi|170713849|gb|EDT26031.1| exodeoxyribonuclease III [Clostridium perfringens CPE str. F4969]
gi|380305037|gb|EIA17320.1| exodeoxyribonuclease III [Clostridium perfringens F262]
Length = 250
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 125/181 (69%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V YG+ + HD EGR++T EF+ FF+++ Y PNS L RL YR+ EW+ +Y+
Sbjct: 72 EPLNVYYGINMEHHDKEGRVITLEFEDFFMVTVYTPNSQSELARLEYRM-EWEDDFRNYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL KK V++ GDLN AH+EID+ NP NR++AGFTDEER F + LS GF+DTFR
Sbjct: 131 LELSSKKGVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDKF-STLLSSGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR RK N GWR+DYFLVS +L D+ ++ I ++ GSDH P+ LI+
Sbjct: 190 NPDLEGVYSWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASIDTEILGSDHCPVKLIM 249
Query: 181 K 181
+
Sbjct: 250 E 250
>gi|256616763|ref|ZP_05473609.1| exonuclease III [Enterococcus faecalis ATCC 4200]
gi|256596290|gb|EEU15466.1| exonuclease III [Enterococcus faecalis ATCC 4200]
Length = 251
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 124/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+ LSV YGLGI HD EGR++T E+ FF+++CY PNS L+RL+YR+T W+ + +Y+
Sbjct: 72 EALSVRYGLGIEAHDQEGRVITLEYPEFFMVTCYTPNSQAELKRLAYRMT-WEDAFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL ++KPVIL GDLN AHQ+ID+ N N+++AGFT EERQ F L GF DTFR
Sbjct: 131 NELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKF-TELLDSGFTDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS+SL ++ + I D+ GSDH P+ ++L
Sbjct: 190 YPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDILGSDHCPVEVVL 249
>gi|182626631|ref|ZP_02954375.1| exodeoxyribonuclease III [Clostridium perfringens D str. JGS1721]
gi|422345838|ref|ZP_16426752.1| exodeoxyribonuclease III (xth) [Clostridium perfringens WAL-14572]
gi|177908025|gb|EDT70604.1| exodeoxyribonuclease III [Clostridium perfringens D str. JGS1721]
gi|373227503|gb|EHP49817.1| exodeoxyribonuclease III (xth) [Clostridium perfringens WAL-14572]
Length = 250
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 125/181 (69%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V YG+ + HD EGR++T EF+ FF+++ Y PNS L RL YR+ EW+ +Y+
Sbjct: 72 EPLNVYYGINMEHHDKEGRVITLEFEDFFMVTVYTPNSQSELARLEYRM-EWEDDFRNYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL KK V++ GDLN AH+EID+ NP NR++AGFTDEER F + LS GF+DTFR
Sbjct: 131 LELSSKKGVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDKF-STLLSSGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR RK N GWR+DYFLVS +L D+ ++ I ++ GSDH P+ LI+
Sbjct: 190 NPDLEGVYSWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASIDTEILGSDHCPVKLIM 249
Query: 181 K 181
+
Sbjct: 250 E 250
>gi|255971866|ref|ZP_05422452.1| exonuclease III [Enterococcus faecalis T1]
gi|255962884|gb|EET95360.1| exonuclease III [Enterococcus faecalis T1]
Length = 257
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 123/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+ LSV YGLGI HD EGR++T E+ FF+++CY PNS L+RL+YR+T W+ + +Y+
Sbjct: 78 EALSVRYGLGIEAHDQEGRVITLEYPEFFMVTCYTPNSQAELKRLAYRMT-WEDAFRAYL 136
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL ++KPVIL GDLN AHQ ID+ N N+++AGFT EERQ F L GF DTFR
Sbjct: 137 NELNQEKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQKF-TELLDSGFTDTFRYF 195
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS+SL ++ + I D+ GSDH P+ ++L
Sbjct: 196 YPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDILGSDHCPVEVVL 255
>gi|18310156|ref|NP_562090.1| exodeoxyribonuclease III [Clostridium perfringens str. 13]
gi|110802988|ref|YP_698514.1| exodeoxyribonuclease III [Clostridium perfringens SM101]
gi|18144835|dbj|BAB80880.1| 3'-exo-deoxyribonuclease [Clostridium perfringens str. 13]
gi|110683489|gb|ABG86859.1| exodeoxyribonuclease III [Clostridium perfringens SM101]
Length = 250
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 125/181 (69%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V YG+ + HD EGR++T EF+ FF+++ Y PNS L RL YR+ EW+ +Y+
Sbjct: 72 EPLNVYYGINMEHHDKEGRVITLEFEDFFMVTVYTPNSQSELARLEYRM-EWEDDFRNYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL KK V++ GDLN AH+EID+ NP NR++AGFTDEER F + LS GF+DTFR
Sbjct: 131 LELSSKKGVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDKF-STLLSSGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR RK N GWR+DYFLVS +L D+ ++ I ++ GSDH P+ LI+
Sbjct: 190 NPDLEGIYSWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASIDTEILGSDHCPVKLIM 249
Query: 181 K 181
+
Sbjct: 250 E 250
>gi|335356439|ref|ZP_08548309.1| exodeoxyribonuclease [Lactobacillus animalis KCTC 3501]
Length = 253
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VT GLG+++ D EGR++T E++ F+L++CY PNS D L+RL +R+ +W+ + S ++
Sbjct: 72 KPLAVTKGLGLAEFDQEGRVLTLEYEDFYLVNCYTPNSQDKLKRLDFRL-QWEAAFSDHL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L KKPVIL GDLN AH EID+ NP N+++AGF+ +ERQ+ A L++GF DTFR
Sbjct: 131 TNLATKKPVILCGDLNVAHNEIDLKNPKPNQKNAGFSIQERQAMTA-LLARGFTDTFRHI 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR R N GWR+DYF+ S +L + DS ILP++ GSDH P+ L
Sbjct: 190 YLDKTGAYSWWSYRFNARARNAGWRIDYFICSNALLPQVKDSQILPEILGSDHCPVML 247
>gi|256854033|ref|ZP_05559398.1| exodeoxyribonuclease [Enterococcus faecalis T8]
gi|307290261|ref|ZP_07570177.1| exodeoxyribonuclease III [Enterococcus faecalis TX0411]
gi|422684833|ref|ZP_16743058.1| exodeoxyribonuclease III [Enterococcus faecalis TX4000]
gi|256710976|gb|EEU26019.1| exodeoxyribonuclease [Enterococcus faecalis T8]
gi|306498682|gb|EFM68183.1| exodeoxyribonuclease III [Enterococcus faecalis TX0411]
gi|315030444|gb|EFT42376.1| exodeoxyribonuclease III [Enterococcus faecalis TX4000]
Length = 251
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 123/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+ LSV YGLGI HD EGR++T E+ FF+++CY PNS L+RL+YR+T W+ + +Y+
Sbjct: 72 EALSVRYGLGIETHDQEGRVITLEYPEFFMVTCYTPNSQAELKRLAYRMT-WEDAFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL ++KPVIL GDLN AHQ ID+ N N+++AGFT EERQ F L GF DTFR
Sbjct: 131 NELNQEKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQKF-TELLDSGFTDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS+SL ++ + I D+ GSDH P+ ++L
Sbjct: 190 YPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDILGSDHCPVEVVL 249
>gi|313892072|ref|ZP_07825670.1| exodeoxyribonuclease III [Dialister microaerophilus UPII 345-E]
gi|313119524|gb|EFR42718.1| exodeoxyribonuclease III [Dialister microaerophilus UPII 345-E]
Length = 254
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 123/179 (68%), Gaps = 3/179 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP+SV+YG+ I +HD EGRL+TAEF++ FL+ CY PNS L RL YR+ +W+ +Y
Sbjct: 74 IKPISVSYGMNIEEHDQEGRLITAEFENHFLVVCYTPNSQRQLARLEYRM-KWENDFKNY 132
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ +L + KPVIL GDLN AH+EID+ NP+ N ++AGFTD+ER+ F + L GF DTFR
Sbjct: 133 LLKLTESKPVILCGDLNVAHKEIDLANPSSNHKNAGFTDDERKKF-STLLENGFTDTFRY 191
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ Y++W Y R+ N GWR+DYFLVS L +K D+ I P++ GSDH P+ L
Sbjct: 192 LYPDKKDAYSWWSYFAKSRERNIGWRIDYFLVSDKLKNKIKDAKIHPEIQGSDHCPVEL 250
>gi|312900096|ref|ZP_07759412.1| exodeoxyribonuclease III [Enterococcus faecalis TX0470]
gi|311292731|gb|EFQ71287.1| exodeoxyribonuclease III [Enterococcus faecalis TX0470]
Length = 251
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 124/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+ LSV YGLGI HD EGR++T E+ FF+++CY PNS L+RL+YR+T W+ + +Y+
Sbjct: 72 EALSVRYGLGIEAHDQEGRVITLEYPEFFMVTCYTPNSQAELKRLAYRMT-WEDAFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL ++KPVIL GDLN AHQ+ID+ N N+++AGFT EERQ F L GF DTFR
Sbjct: 131 NELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKF-TELLDSGFTDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS+SL ++ + I D+ GSDH P+ ++L
Sbjct: 190 YPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDILGSDHCPVEVVL 249
>gi|420449595|ref|ZP_14948464.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-44]
gi|393062395|gb|EJB63250.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-44]
Length = 250
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDIKEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFN-ELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|241888975|ref|ZP_04776279.1| exodeoxyribonuclease III [Gemella haemolysans ATCC 10379]
gi|241864224|gb|EER68602.1| exodeoxyribonuclease III [Gemella haemolysans ATCC 10379]
Length = 254
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 123/181 (67%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYG+GI +HD+EGR++T E+D FF ++ Y PNSG L+RL YR++ W+ +Y+
Sbjct: 72 EPLNVTYGIGIEEHDTEGRVITLEYDKFFFITVYTPNSGSELKRLEYRMS-WEEDFKNYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L K K V++ GDLN AH EID+ NP N ++AGFT EER+ F L GF+DTFR
Sbjct: 131 LALNKTKGVVVCGDLNVAHTEIDLKNPKSNMKNAGFTPEEREKF-TKLLDAGFIDTFRYY 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR RK N GWR+DYFLVS+ L + + I ++ GSDH P+ L+L
Sbjct: 190 NPDLTGAYSWWSYRFNARKNNAGWRIDYFLVSRDLEEYLESAAIHNEIFGSDHCPVELVL 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|373461425|ref|ZP_09553165.1| exodeoxyribonuclease III (xth) [Prevotella maculosa OT 289]
gi|371952383|gb|EHO70222.1| exodeoxyribonuclease III (xth) [Prevotella maculosa OT 289]
Length = 251
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 122/181 (67%), Gaps = 2/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YG+GI +HD EGR++T E++ F+L++ Y PN+ DGLRRL YR+T W+ +Y+
Sbjct: 73 EPLSVAYGIGIDEHDHEGRVITLEYEDFYLVNVYTPNAQDGLRRLDYRMT-WEDDFQAYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L+ +KPVI+ GD+N AH+EID+ NP N R+AGFTDEER L GF DTFR
Sbjct: 132 HRLDARKPVIVCGDMNVAHEEIDLKNPKTNHRNAGFTDEERAKM-TQLLGNGFTDTFRNL 190
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ + Y++W YR R+ N GWR+DYFL+S L + ++ I ++ GSDH P+ + L
Sbjct: 191 YPEAIKYSWWSYRFRAREKNTGWRIDYFLISDRLRPRLKEAAIHNEIFGSDHCPVEVDLD 250
Query: 182 L 182
L
Sbjct: 251 L 251
>gi|332882010|ref|ZP_08449645.1| exodeoxyribonuclease III [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|357048168|ref|ZP_09109722.1| exodeoxyribonuclease III [Paraprevotella clara YIT 11840]
gi|332679934|gb|EGJ52896.1| exodeoxyribonuclease III [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|355528751|gb|EHG98229.1| exodeoxyribonuclease III [Paraprevotella clara YIT 11840]
Length = 250
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 125/179 (69%), Gaps = 3/179 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL+VTYGLG+ +HD EGR++T E FFL++ Y PNS DGL+RL YR+ +W+ + +Y+
Sbjct: 73 PLNVTYGLGLEEHDKEGRVITLEMPDFFLVTVYTPNSQDGLKRLDYRM-QWEEAFRAYLL 131
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
+L+ +KPVI+ GDLN AH+EID+ NP NR++AGFTDEER+ FG L GF DTFR +
Sbjct: 132 QLDTRKPVIVCGDLNVAHREIDLKNPKSNRKNAGFTDEEREKFGI-LLDSGFTDTFRFFY 190
Query: 123 RGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
G Y++W YR R+ N GWR+DYFLVS+ L + + I ++ GSDH P+ + L
Sbjct: 191 PDREGIYSWWSYRFKAREKNAGWRIDYFLVSKRLEAQLKSATIHTEIFGSDHCPVEVDL 249
>gi|226467620|emb|CAX69686.1| APEX nuclease [Schistosoma japonicum]
Length = 319
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/183 (50%), Positives = 117/183 (63%), Gaps = 1/183 (0%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I P VTYG+G HD EGR++TAEFD F+L++ YVPN+G GL RL YR EWDP Y
Sbjct: 137 IAPKKVTYGIGRKVHDEEGRVITAEFDRFYLVTAYVPNAGQGLARLPYREKEWDPDFLEY 196
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+++L+ KPVI+ GDLN AH+EID+ P N ++AGFTD+ER F S +DT+R
Sbjct: 197 LRKLDATKPVIVCGDLNVAHEEIDLARPDTNHKTAGFTDQERSGFTKLLSSANLIDTYRH 256
Query: 121 QHRG-VVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ Y++W YR G R N GWRLDYFLVSQ + D I VTGSDH P+ L
Sbjct: 257 FYPDRREAYSFWSYRTGARLINNGWRLDYFLVSQRILANVGDQEIRCGVTGSDHCPVVLY 316
Query: 180 LKL 182
L +
Sbjct: 317 LHI 319
>gi|420484801|ref|ZP_14983422.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-3]
gi|420515183|ref|ZP_15013650.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-3b]
gi|393098636|gb|EJB99222.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-3]
gi|393155626|gb|EJC55898.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-3b]
Length = 250
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFN-ELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTHLKDALIYKDILGSDHCPVGLEL 249
>gi|257420126|ref|ZP_05597120.1| exonuclease III [Enterococcus faecalis T11]
gi|257161954|gb|EEU91914.1| exonuclease III [Enterococcus faecalis T11]
Length = 251
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 124/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+ LSV YGLG+ HD EGR++T E+ FF+++CY PNS L+RL+YR+T W+ + +Y+
Sbjct: 72 EALSVRYGLGVEAHDQEGRVITLEYPEFFMVTCYTPNSQAELKRLAYRMT-WEDAFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL ++KPVIL GDLN AHQ+ID+ N N+++AGFT EERQ F L GF DTFR
Sbjct: 131 NELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKF-TELLDSGFTDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS+SL ++ + I D+ GSDH P+ ++L
Sbjct: 190 YPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDILGSDHCPVEVVL 249
>gi|328947089|ref|YP_004364426.1| exodeoxyribonuclease III Xth [Treponema succinifaciens DSM 2489]
gi|328447413|gb|AEB13129.1| exodeoxyribonuclease III Xth [Treponema succinifaciens DSM 2489]
Length = 251
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 125/182 (68%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+S +YG+GI++HD+EGR++T E++ FFL++ Y PNS D LRRL YR+ +W+ +Y+
Sbjct: 72 EPISASYGIGIAEHDTEGRVITLEYEKFFLVTVYTPNSQDELRRLEYRM-KWEDDFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L KK VI+ GD+N AH+EIDI NP NRR+AGFTDEER LS GF D+FR
Sbjct: 131 KTLALKKGVIVCGDMNVAHEEIDIKNPKTNRRNAGFTDEERGKM-TELLSSGFTDSFRHF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWR+DYFLVS S+ DK + I ++ GSDH P+ L +
Sbjct: 190 YPDTAGVYSWWSYRFHAREKNTGWRIDYFLVSDSIKDKMTGAKIHTEILGSDHCPVELDM 249
Query: 181 KL 182
+
Sbjct: 250 EF 251
>gi|29377212|ref|NP_816366.1| exodeoxyribonuclease [Enterococcus faecalis V583]
gi|227554220|ref|ZP_03984267.1| exodeoxyribonuclease [Enterococcus faecalis HH22]
gi|422714823|ref|ZP_16771549.1| exodeoxyribonuclease III [Enterococcus faecalis TX0309A]
gi|422717962|ref|ZP_16774635.1| exodeoxyribonuclease III [Enterococcus faecalis TX0309B]
gi|29344678|gb|AAO82436.1| exodeoxyribonuclease [Enterococcus faecalis V583]
gi|227176667|gb|EEI57639.1| exodeoxyribonuclease [Enterococcus faecalis HH22]
gi|315573773|gb|EFU85964.1| exodeoxyribonuclease III [Enterococcus faecalis TX0309B]
gi|315580287|gb|EFU92478.1| exodeoxyribonuclease III [Enterococcus faecalis TX0309A]
Length = 251
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 123/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+ LSV YGLGI HD EGR++T E+ FF+++CY PNS L+RL+YR+T W+ + +Y+
Sbjct: 72 EALSVRYGLGIEAHDQEGRVITLEYPEFFMVTCYTPNSQAELKRLAYRMT-WEDAFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL ++KPVIL GDLN AHQ ID+ N N+++AGFT EERQ F L GF DTFR
Sbjct: 131 NELNQEKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQKF-TELLDSGFTDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS+SL ++ + I D+ GSDH P+ ++L
Sbjct: 190 YPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDILGSDHCPVEVVL 249
>gi|376316682|emb|CCG00067.1| exodeoxyribonuclease III [uncultured Flavobacteriia bacterium]
Length = 253
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 123/181 (67%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP+SV+Y + I +HD+EGR++ AEF ++F+++ YVPNSG L+RL+YR T WD + +Y+
Sbjct: 75 KPISVSYDINIEEHDTEGRVICAEFSAYFVVTVYVPNSGSALKRLTYRQT-WDKAFLAYL 133
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGN-RRSAGFTDEERQSFGANFLSKGFVDTFRA 120
K LEKKKPVI+ GDLN AH++ID+ NP N +SAG+ EE A +LS GFVDTFR
Sbjct: 134 KALEKKKPVIVCGDLNVAHRDIDLANPKPNYNKSAGYMQEEIDGIDA-YLSAGFVDTFRH 192
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
Y++W YR G R N GWR+DYFL+S L K + I +V GSDH P+ L L
Sbjct: 193 FQPDTQKYSWWSYRAGARVRNVGWRIDYFLISPDLLKKVKKADIYNEVMGSDHCPVALEL 252
Query: 181 K 181
K
Sbjct: 253 K 253
>gi|386746941|ref|YP_006220158.1| exodeoxyribonuclease III [Helicobacter pylori HUP-B14]
gi|384553190|gb|AFI08138.1| exodeoxyribonuclease III [Helicobacter pylori HUP-B14]
Length = 250
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR+VT EF+SF+L++ Y PNS L RL+YR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLNYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTCLKDALIYKDILGSDHCPVGLEL 249
>gi|256961018|ref|ZP_05565189.1| exonuclease III [Enterococcus faecalis Merz96]
gi|293384592|ref|ZP_06630458.1| exodeoxyribonuclease III [Enterococcus faecalis R712]
gi|293386821|ref|ZP_06631392.1| exodeoxyribonuclease III [Enterococcus faecalis S613]
gi|312906418|ref|ZP_07765426.1| exodeoxyribonuclease III [Enterococcus faecalis DAPTO 512]
gi|312979423|ref|ZP_07791111.1| exodeoxyribonuclease III [Enterococcus faecalis DAPTO 516]
gi|422701088|ref|ZP_16758929.1| exodeoxyribonuclease III [Enterococcus faecalis TX1342]
gi|256951514|gb|EEU68146.1| exonuclease III [Enterococcus faecalis Merz96]
gi|291078138|gb|EFE15502.1| exodeoxyribonuclease III [Enterococcus faecalis R712]
gi|291083824|gb|EFE20787.1| exodeoxyribonuclease III [Enterococcus faecalis S613]
gi|310627572|gb|EFQ10855.1| exodeoxyribonuclease III [Enterococcus faecalis DAPTO 512]
gi|311287794|gb|EFQ66350.1| exodeoxyribonuclease III [Enterococcus faecalis DAPTO 516]
gi|315170467|gb|EFU14484.1| exodeoxyribonuclease III [Enterococcus faecalis TX1342]
Length = 251
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 124/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+ LSV YGLG+ HD EGR++T E+ FF+++CY PNS L+RL+YR+T W+ + +Y+
Sbjct: 72 EALSVRYGLGVEAHDQEGRVITLEYPEFFMVTCYTPNSQAELKRLAYRMT-WEDAFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL ++KPVIL GDLN AHQ+ID+ N N+++AGFT EERQ F L GF DTFR
Sbjct: 131 NELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKF-TELLDSGFTDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS+SL ++ + I D+ GSDH P+ ++L
Sbjct: 190 YPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDILGSDHCPVEVVL 249
>gi|253580808|ref|ZP_04858071.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847878|gb|EES75845.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 251
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 121/182 (66%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YG+GI HD EGR++T E++ F+L++ Y PNS LRRL YR+ W+ +Y+
Sbjct: 72 EPLSVVYGIGIEKHDKEGRVITLEYEKFYLVTVYTPNSQSELRRLEYRM-HWEEDFLAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L++ KPVI GD N AHQEID+ NP NR++AGFTDEER FG L GF+DTFR
Sbjct: 131 LKLQESKPVICCGDFNVAHQEIDLKNPKTNRKNAGFTDEERACFG-KVLESGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ V G Y++W YR R+ N GWR+DYF+ S L DK + I ++ GSDH P+ L +
Sbjct: 190 YPDVEGRYSWWSYRFKAREKNAGWRIDYFITSPQLKDKLKGAEIHSEIMGSDHCPVELQI 249
Query: 181 KL 182
L
Sbjct: 250 TL 251
>gi|229549148|ref|ZP_04437873.1| exodeoxyribonuclease [Enterococcus faecalis ATCC 29200]
gi|256957962|ref|ZP_05562133.1| exonuclease III [Enterococcus faecalis DS5]
gi|257084299|ref|ZP_05578660.1| exonuclease III [Enterococcus faecalis Fly1]
gi|257090921|ref|ZP_05585282.1| exonuclease III [Enterococcus faecalis CH188]
gi|307276972|ref|ZP_07558082.1| exodeoxyribonuclease III [Enterococcus faecalis TX2134]
gi|312902560|ref|ZP_07761766.1| exodeoxyribonuclease III [Enterococcus faecalis TX0635]
gi|312951910|ref|ZP_07770798.1| exodeoxyribonuclease III [Enterococcus faecalis TX0102]
gi|384519525|ref|YP_005706830.1| exodeoxyribonuclease III [Enterococcus faecalis 62]
gi|421513270|ref|ZP_15960049.1| Exodeoxyribonuclease III [Enterococcus faecalis ATCC 29212]
gi|422687253|ref|ZP_16745435.1| exodeoxyribonuclease III [Enterococcus faecalis TX0630]
gi|422690983|ref|ZP_16749024.1| exodeoxyribonuclease III [Enterococcus faecalis TX0031]
gi|422710887|ref|ZP_16767822.1| exodeoxyribonuclease III [Enterococcus faecalis TX0027]
gi|422725430|ref|ZP_16781891.1| exodeoxyribonuclease III [Enterococcus faecalis TX0312]
gi|229305702|gb|EEN71698.1| exodeoxyribonuclease [Enterococcus faecalis ATCC 29200]
gi|256948458|gb|EEU65090.1| exonuclease III [Enterococcus faecalis DS5]
gi|256992329|gb|EEU79631.1| exonuclease III [Enterococcus faecalis Fly1]
gi|256999733|gb|EEU86253.1| exonuclease III [Enterococcus faecalis CH188]
gi|306506395|gb|EFM75555.1| exodeoxyribonuclease III [Enterococcus faecalis TX2134]
gi|310630099|gb|EFQ13382.1| exodeoxyribonuclease III [Enterococcus faecalis TX0102]
gi|310634230|gb|EFQ17513.1| exodeoxyribonuclease III [Enterococcus faecalis TX0635]
gi|315035107|gb|EFT47039.1| exodeoxyribonuclease III [Enterococcus faecalis TX0027]
gi|315154300|gb|EFT98316.1| exodeoxyribonuclease III [Enterococcus faecalis TX0031]
gi|315159607|gb|EFU03624.1| exodeoxyribonuclease III [Enterococcus faecalis TX0312]
gi|315579630|gb|EFU91821.1| exodeoxyribonuclease III [Enterococcus faecalis TX0630]
gi|323481658|gb|ADX81097.1| exodeoxyribonuclease III [Enterococcus faecalis 62]
gi|401673644|gb|EJS80023.1| Exodeoxyribonuclease III [Enterococcus faecalis ATCC 29212]
Length = 251
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 123/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+ LSV YGLGI HD EGR++T E+ FF+++CY PNS L+RL+YR+T W+ + +Y+
Sbjct: 72 EALSVRYGLGIEAHDQEGRVITLEYPEFFMVTCYTPNSQAELKRLAYRMT-WEDAFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL ++KPVIL GDLN AHQ ID+ N N+++AGFT EERQ F L GF DTFR
Sbjct: 131 NELNQEKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQKF-TELLDSGFTDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS+SL ++ + I D+ GSDH P+ ++L
Sbjct: 190 YPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDILGSDHCPVEVVL 249
>gi|260589662|ref|ZP_05855575.1| exodeoxyribonuclease III [Blautia hansenii DSM 20583]
gi|331083093|ref|ZP_08332210.1| exodeoxyribonuclease [Lachnospiraceae bacterium 6_1_63FAA]
gi|260539902|gb|EEX20471.1| exodeoxyribonuclease III [Blautia hansenii DSM 20583]
gi|330405095|gb|EGG84632.1| exodeoxyribonuclease [Lachnospiraceae bacterium 6_1_63FAA]
Length = 251
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 126/182 (69%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YG+GI +HD EGR++T E+++F++++ Y PNS L RLSYR+ +W+ +Y+
Sbjct: 72 EPLSVQYGIGIEEHDQEGRVITLEYENFYMVTVYTPNSQSELARLSYRM-QWEDDFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
++L++KKPVI+ GDLN AHQEID+ NP NR +AGFTDEER+ F FL GF DTFR
Sbjct: 131 QQLDEKKPVIMCGDLNVAHQEIDLKNPKTNRHNAGFTDEEREKF-TTFLDAGFTDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W YR R+ N GWR+DYF S+ L +K + I D+ GSDH P+ + +
Sbjct: 190 YPDKTEIYSWWSYRFKAREKNAGWRIDYFCTSKRLDEKLLSASIHTDIFGSDHCPVEVQI 249
Query: 181 KL 182
+L
Sbjct: 250 EL 251
>gi|300860584|ref|ZP_07106671.1| exodeoxyribonuclease III [Enterococcus faecalis TUSoD Ef11]
gi|428767881|ref|YP_007153992.1| exodeoxyribonuclease III [Enterococcus faecalis str. Symbioflor 1]
gi|300849623|gb|EFK77373.1| exodeoxyribonuclease III [Enterococcus faecalis TUSoD Ef11]
gi|427186054|emb|CCO73278.1| exodeoxyribonuclease III [Enterococcus faecalis str. Symbioflor 1]
Length = 251
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 123/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+ LSV YGLGI HD EGR++T E+ FF+++CY PNS L+RL+YR+T W+ + +Y+
Sbjct: 72 EALSVRYGLGIEAHDQEGRVITLEYPEFFMVTCYTPNSQAELKRLAYRMT-WEDAFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL ++KPVIL GDLN AHQ ID+ N N+++AGFT EERQ F L GF DTFR
Sbjct: 131 NELNQEKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQKF-TELLDSGFTDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS+SL ++ + I D+ GSDH P+ ++L
Sbjct: 190 YPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDILGSDHCPVEVVL 249
>gi|330996654|ref|ZP_08320532.1| exodeoxyribonuclease III [Paraprevotella xylaniphila YIT 11841]
gi|329572726|gb|EGG54359.1| exodeoxyribonuclease III [Paraprevotella xylaniphila YIT 11841]
Length = 250
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 125/179 (69%), Gaps = 3/179 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL+VTYGLG+ +HD EGR++T E FFL++ Y PNS DGL+RL YR+ +W+ + +Y+
Sbjct: 73 PLNVTYGLGLEEHDREGRVITLEMPDFFLVTVYTPNSQDGLKRLDYRM-QWEEAFRAYLL 131
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
+L+ +KPVI+ GDLN AH+EID+ NP NR++AGFTDEER+ FG L GF DTFR +
Sbjct: 132 QLDTRKPVIVCGDLNVAHREIDLKNPKSNRKNAGFTDEEREKFGI-LLDSGFTDTFRFFY 190
Query: 123 RGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
G Y++W YR R+ N GWR+DYFLVS+ L + + I ++ GSDH P+ + L
Sbjct: 191 PDREGIYSWWSYRFKAREKNAGWRIDYFLVSKRLEAQLKSATIHTEIFGSDHCPVEVDL 249
>gi|422731891|ref|ZP_16788239.1| exodeoxyribonuclease III [Enterococcus faecalis TX0645]
gi|315162099|gb|EFU06116.1| exodeoxyribonuclease III [Enterococcus faecalis TX0645]
Length = 251
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 124/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+ LSV YGLGI HD EGR++T E+ FF+++CY PNS L+RL+YR+T W+ + +Y+
Sbjct: 72 EALSVRYGLGIEAHDQEGRVITLEYPEFFMVTCYTPNSQAELKRLAYRMT-WEDAFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL ++KPVIL GDLN AHQ+ID+ N N+++AGFT EERQ F L GF DTFR
Sbjct: 131 NELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQKF-TGLLDSGFTDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS+SL ++ + I D+ GSDH P+ ++L
Sbjct: 190 YPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDILGSDHCPVEVVL 249
>gi|291523803|emb|CBK89390.1| exodeoxyribonuclease III [Eubacterium rectale DSM 17629]
Length = 251
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+GI +HD EGR++T E+D+F+L++CY PNS + L+RL YR+ +W+ Y+
Sbjct: 72 EPLSVSYGIGIEEHDKEGRVITLEYDNFYLVTCYTPNSQNELKRLPYRM-QWEDDFREYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L+ +KPV+L GDLN AH EID+ NP NR++AGF+DEER L GF DTFR
Sbjct: 131 KALDAQKPVVLCGDLNVAHNEIDLKNPKTNRKNAGFSDEERAKM-TELLGSGFTDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWR+DYF+ S+ + DK + I DV GSDH P+ + +
Sbjct: 190 YPDAEGIYSWWSYRFKAREKNAGWRIDYFITSKRINDKLKKAAIHTDVLGSDHCPVEVDI 249
Query: 181 KL 182
+
Sbjct: 250 EF 251
>gi|254168985|ref|ZP_04875824.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469]
gi|197622091|gb|EDY34667.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469]
Length = 255
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 128/182 (70%), Gaps = 2/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I+PL+V +G+G DSEGR++TAE++ F+L++ Y PNS GL RL ++I E+D + SY
Sbjct: 76 IEPLNVKFGIGEDKFDSEGRVITAEYEKFYLVNAYFPNSQHGLTRLDFKI-EFDKLIHSY 134
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ EL KKKPVIL GD N AH+EID+ NP N ++AGFT +ER ++ FL G++DTFR
Sbjct: 135 LNELRKKKPVILCGDFNVAHKEIDLANPKQNVKNAGFTPQER-AWMDKFLQDGYIDTFRM 193
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W YR R+ N GWR+DYF+VS+ L DK S+IL +V GSDH+PI ++L
Sbjct: 194 FTKEGGHYTWWTYRFKARERNIGWRVDYFVVSEELKDKVKSSWILSEVYGSDHAPIAMVL 253
Query: 181 KL 182
+
Sbjct: 254 DI 255
>gi|420528800|ref|ZP_15027190.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-25c]
gi|420528961|ref|ZP_15027349.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-25d]
gi|393132399|gb|EJC32820.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-25c]
gi|393138075|gb|EJC38457.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-25d]
Length = 250
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|381180194|ref|ZP_09889037.1| exodeoxyribonuclease III Xth [Treponema saccharophilum DSM 2985]
gi|380767904|gb|EIC01900.1| exodeoxyribonuclease III Xth [Treponema saccharophilum DSM 2985]
Length = 253
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+GI HD+EGR++T E+ FFL++ Y PNS + L+RL YR+ W+ +++
Sbjct: 74 EPLSVSYGIGIEQHDTEGRVITLEYADFFLVTVYTPNSQNELKRLDYRMA-WEDDFRNFL 132
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L+ KKPVI+ GD+N AH+EIDI NP+ NRR+AGFTDEER L+ GF+DTFR
Sbjct: 133 VSLKAKKPVIVCGDMNVAHEEIDIKNPSANRRNAGFTDEERAKM-TELLASGFIDTFRTL 191
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR R+ N GWR+DYFLVS + + D+ I D+ GSDH P+ L L
Sbjct: 192 NPELKDAYSWWSYRFHARERNAGWRIDYFLVSDDIKPRISDAKIHADILGSDHCPVELEL 251
Query: 181 KL 182
+
Sbjct: 252 EF 253
>gi|418007606|ref|ZP_12647486.1| exodeoxyribonuclease III [Lactobacillus casei UW4]
gi|410548624|gb|EKQ22818.1| exodeoxyribonuclease III [Lactobacillus casei UW4]
Length = 252
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 119/180 (66%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYG+G+ +HD+EGR++T E+ +F+L++ Y PNSG L+RL YR +WD +Y
Sbjct: 72 EPLNVTYGMGVPEHDTEGRIITLEYPNFYLMTVYTPNSGGELKRLDYR-QQWDKDFLAYT 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L KKP++ GDLN AHQEID+ N N +AGFTDEER F L GF+DTFR
Sbjct: 131 NQLAAKKPLVYCGDLNVAHQEIDLKNDKTNHHNAGFTDEERADFTKQ-LDSGFIDTFRNL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R N GWR+DYF+ S++ D+ IL D+ GSDH P+ L+ K
Sbjct: 190 YPDTVTYSWWSYRFHARANNAGWRIDYFVSSRNFKPYIQDAKILTDIMGSDHCPVELVTK 249
>gi|420469649|ref|ZP_14968365.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-10]
gi|393083481|gb|EJB84186.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-10]
Length = 250
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V+YG+ I +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLNVSYGIDIKEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KVLELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I ++ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKNILGSDHCPVGLEL 249
>gi|328958150|ref|YP_004375536.1| apurinic/apyrimidinic endonuclease [Carnobacterium sp. 17-4]
gi|328674474|gb|AEB30520.1| apurinic/apyrimidinic endonuclease [Carnobacterium sp. 17-4]
Length = 253
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 123/181 (67%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL V+YG+G +HD EGR++T + ++++++CY PNS L+RL YR+ +W+ Y+
Sbjct: 72 KPLDVSYGIGKPEHDQEGRVITLSYPNYYVVTCYTPNSKSELKRLDYRM-QWEDDFQLYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+L+ +KPVIL GDLN AH+ ID+ N N+ SAGF+ EER F A L GF+DTFR
Sbjct: 131 KKLDSEKPVILCGDLNVAHENIDLKNWKTNQLSAGFSKEERMKFSA-LLDAGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G YT+W YR RKTN GWR+DYF VS L D ++ IL D+ GSDH P+ LIL
Sbjct: 190 YPDLEGAYTWWNYRFNARKTNAGWRIDYFCVSTRLQDHLQEARILDDIVGSDHCPVELIL 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|421712459|ref|ZP_16151793.1| exodeoxyribonuclease III [Helicobacter pylori R030b]
gi|407209732|gb|EKE79620.1| exodeoxyribonuclease III [Helicobacter pylori R030b]
Length = 250
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGINMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|419842315|ref|ZP_14365665.1| exodeoxyribonuclease III [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|421501617|ref|ZP_15948576.1| exodeoxyribonuclease III [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
gi|386902224|gb|EIJ67066.1| exodeoxyribonuclease III [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|402265769|gb|EJU15229.1| exodeoxyribonuclease III [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
Length = 250
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 121/181 (66%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YGLGI +HD EGR++ EF+ F++++ Y PNS + L RL YR+ W+ +Y+
Sbjct: 72 EPLSVSYGLGIEEHDQEGRVICLEFEDFYMVTVYTPNSKNELERLDYRMI-WEDEFRNYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L +KKPV++ GD+N AH+EID+ NP NRR+AGFTDEER F L GF D+FR
Sbjct: 131 SKLNEKKPVVVCGDMNVAHEEIDLKNPKTNRRNAGFTDEERNKF-TELLQAGFTDSFRYL 189
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR RK N GWR+DYF+VS ++ ++ I + GSDH P+ L L
Sbjct: 190 YPDTLHAYSWWSYRANARKNNTGWRIDYFVVSNDWKEQIQEAEIHAEQEGSDHCPVALYL 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|291457988|ref|ZP_06597378.1| exodeoxyribonuclease III [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291419320|gb|EFE93039.1| exodeoxyribonuclease III [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 272
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 127/182 (69%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+GI +HD EGR+++AEF ++L+ YVPNS + L+RLSYR+ EW+ + Y+
Sbjct: 74 EPLSVSYGIGIPEHDREGRVISAEFPDCYILTVYVPNSQNELQRLSYRM-EWEDAFREYI 132
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
LE+KKPVI GDLN AHQEID+ NPA N +AGFTD+ER F + L G++D+FR
Sbjct: 133 LSLEEKKPVIYCGDLNVAHQEIDLKNPASNHHNAGFTDDERAKF-SRLLDCGYLDSFRFL 191
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
H Y++W YR R+ N GWR+DYF+VS+ L ++ + I P++ GSDH P+ L L
Sbjct: 192 HPEERDAYSWWSYRTKARERNVGWRIDYFVVSEKLRERIRGASIHPEIMGSDHCPVELDL 251
Query: 181 KL 182
+
Sbjct: 252 AV 253
>gi|329120913|ref|ZP_08249545.1| exodeoxyribonuclease III [Dialister micraerophilus DSM 19965]
gi|327471372|gb|EGF16823.1| exodeoxyribonuclease III [Dialister micraerophilus DSM 19965]
Length = 254
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 122/179 (68%), Gaps = 3/179 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP+SV+YG+ I +HD EGRL+TAEF + FL+ CY PNS L RL YR+ +W+ +Y
Sbjct: 74 IKPISVSYGMNIEEHDQEGRLITAEFKNHFLVVCYTPNSQRQLARLEYRM-KWENDFKNY 132
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ +L + KPVIL GDLN AH+EID+ NP+ N ++AGFTD+ER+ F + L GF DTFR
Sbjct: 133 LLKLTESKPVILCGDLNVAHKEIDLANPSSNHKNAGFTDDERKKF-STLLENGFTDTFRY 191
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ Y++W Y R+ N GWR+DYFLVS L +K D+ I P++ GSDH P+ L
Sbjct: 192 LYPDKKDAYSWWSYFAKSRERNIGWRIDYFLVSDKLKNKIKDAKIHPEIQGSDHCPVEL 250
>gi|344942649|ref|ZP_08781936.1| exodeoxyribonuclease III Xth [Methylobacter tundripaludum SV96]
gi|344259936|gb|EGW20208.1| exodeoxyribonuclease III Xth [Methylobacter tundripaludum SV96]
Length = 254
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 120/178 (67%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL V +GI +HD EGR++ AEF++FFLL+ YVPNSG+ L RL YR T WD +Y
Sbjct: 75 EPLQVISDIGIVEHDREGRVIVAEFENFFLLNVYVPNSGEALARLDYRQT-WDIEFLAYC 133
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGN-RRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++L+KKKP+I GD N AHQEIDI P N +SAG+T E F + FL G VDTFR
Sbjct: 134 RQLQKKKPLIACGDFNVAHQEIDIARPKPNYNKSAGYTQVEIDGF-SRFLDAGLVDTFRH 192
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
H V Y++W +R G R N GWR+DY L S++LA ++ILP+++GSDH P+G+
Sbjct: 193 FHPDTVAYSWWSFRGGARARNVGWRIDYVLTSKTLAGNVKQAFILPEISGSDHCPVGI 250
>gi|254166764|ref|ZP_04873618.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469]
gi|289596498|ref|YP_003483194.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469]
gi|197624374|gb|EDY36935.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469]
gi|289534285|gb|ADD08632.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469]
Length = 255
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 128/182 (70%), Gaps = 2/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I+PL++ +G+G DSEGR++TAE++ F+L++ Y PNS GL RL ++I E+D + SY
Sbjct: 76 IEPLNIKFGIGEDKFDSEGRVITAEYEKFYLVNAYFPNSQHGLTRLDFKI-EFDKLIHSY 134
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ EL KKKPVIL GD N AH+EID+ NP N ++AGFT +ER ++ FL G++DTFR
Sbjct: 135 LNELRKKKPVILCGDFNVAHKEIDLANPKQNVKNAGFTPQER-AWMDEFLQDGYIDTFRM 193
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W YR R+ N GWR+DYF+VS+ L DK S+IL +V GSDH+PI ++L
Sbjct: 194 FTKEGGHYTWWTYRFKARERNIGWRVDYFVVSEELKDKVKSSWILSEVYGSDHAPIAMVL 253
Query: 181 KL 182
+
Sbjct: 254 DI 255
>gi|390952993|ref|YP_006416751.1| exodeoxyribonuclease III [Aequorivita sublithincola DSM 14238]
gi|390418979|gb|AFL79736.1| exodeoxyribonuclease III [Aequorivita sublithincola DSM 14238]
Length = 254
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 120/178 (67%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SVTY +GI++HD+EGR++ AE+D+F+L++ YVPNSG L RL YR WD +Y+
Sbjct: 75 EPISVTYDMGIAEHDTEGRVICAEYDTFYLVNVYVPNSGQKLERLDYR-KGWDTDFHNYL 133
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGN-RRSAGFTDEERQSFGANFLSKGFVDTFRA 120
K +EK K VIL GDLN AHQ ID+ N N ++AG+T E NFL++GFVDTFR
Sbjct: 134 KNIEKTKSVILCGDLNVAHQAIDLKNDKANYNKTAGYTQIEIDGMD-NFLNEGFVDTFRH 192
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
H V YTYW YR R+ N GWR+DYFLVS L +K + IL + GSDH PI L
Sbjct: 193 FHPETVAYTYWSYRFKSRERNTGWRIDYFLVSNPLVEKVNKVEILSEYFGSDHCPIKL 250
>gi|301066021|ref|YP_003788044.1| exonuclease III [Lactobacillus casei str. Zhang]
gi|417980207|ref|ZP_12620888.1| exodeoxyribonuclease III [Lactobacillus casei 12A]
gi|300438428|gb|ADK18194.1| Exonuclease III [Lactobacillus casei str. Zhang]
gi|410525434|gb|EKQ00336.1| exodeoxyribonuclease III [Lactobacillus casei 12A]
Length = 252
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 118/180 (65%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYG+G+ +HD+EGR++T E+ +F+L++ Y PNSG L+RL YR +WD +Y
Sbjct: 72 EPLNVTYGMGVPEHDTEGRIITLEYPNFYLMTVYTPNSGGELKRLDYR-QQWDKDFLAYT 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L KKP++ GDLN AHQEID+ N N +AGFTDEER F L GF+DTFR
Sbjct: 131 NQLAAKKPLVYCGDLNVAHQEIDLKNDKTNHHNAGFTDEERADFTKQ-LDSGFIDTFRNL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R N GWR+DYF+ S+ D+ IL D+ GSDH P+ L+ K
Sbjct: 190 YPDTVTYSWWSYRFHARANNAGWRIDYFVSSRDFKPYIQDAKILTDIMGSDHCPVELVTK 249
>gi|116494506|ref|YP_806240.1| exonuclease III [Lactobacillus casei ATCC 334]
gi|191637944|ref|YP_001987110.1| exodeoxyribonuclease III [Lactobacillus casei BL23]
gi|227535523|ref|ZP_03965572.1| exodeoxyribonuclease III [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|385819687|ref|YP_005856074.1| Exodeoxyribonuclease III [Lactobacillus casei LC2W]
gi|385822845|ref|YP_005859187.1| Exodeoxyribonuclease III [Lactobacillus casei BD-II]
gi|417983078|ref|ZP_12623720.1| exodeoxyribonuclease III [Lactobacillus casei 21/1]
gi|417989182|ref|ZP_12629696.1| exodeoxyribonuclease III [Lactobacillus casei A2-362]
gi|417992549|ref|ZP_12632904.1| exodeoxyribonuclease III [Lactobacillus casei CRF28]
gi|417995780|ref|ZP_12636067.1| exodeoxyribonuclease III [Lactobacillus casei M36]
gi|417998717|ref|ZP_12638932.1| exodeoxyribonuclease III [Lactobacillus casei T71499]
gi|418004708|ref|ZP_12644721.1| exodeoxyribonuclease III [Lactobacillus casei UW1]
gi|418013374|ref|ZP_12653018.1| exodeoxyribonuclease III [Lactobacillus casei Lpc-37]
gi|116104656|gb|ABJ69798.1| Exonuclease III [Lactobacillus casei ATCC 334]
gi|190712246|emb|CAQ66252.1| Exodeoxyribonuclease III [Lactobacillus casei BL23]
gi|227186845|gb|EEI66912.1| exodeoxyribonuclease III [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|327382014|gb|AEA53490.1| Exodeoxyribonuclease III [Lactobacillus casei LC2W]
gi|327385172|gb|AEA56646.1| Exodeoxyribonuclease III [Lactobacillus casei BD-II]
gi|410528859|gb|EKQ03697.1| exodeoxyribonuclease III [Lactobacillus casei 21/1]
gi|410533128|gb|EKQ07815.1| exodeoxyribonuclease III [Lactobacillus casei CRF28]
gi|410536484|gb|EKQ11077.1| exodeoxyribonuclease III [Lactobacillus casei M36]
gi|410539278|gb|EKQ13814.1| exodeoxyribonuclease III [Lactobacillus casei A2-362]
gi|410540321|gb|EKQ14836.1| exodeoxyribonuclease III [Lactobacillus casei T71499]
gi|410548944|gb|EKQ23126.1| exodeoxyribonuclease III [Lactobacillus casei UW1]
gi|410555900|gb|EKQ29831.1| exodeoxyribonuclease III [Lactobacillus casei Lpc-37]
Length = 252
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 118/180 (65%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYG+G+ +HD+EGR++T E+ +F+L++ Y PNSG L+RL YR +WD +Y
Sbjct: 72 EPLNVTYGMGVPEHDTEGRIITLEYPNFYLMTVYTPNSGGELKRLDYR-QQWDKDFLAYT 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L KKP++ GDLN AHQEID+ N N +AGFTDEER F L GF+DTFR
Sbjct: 131 NQLAAKKPLVYCGDLNVAHQEIDLKNDKTNHHNAGFTDEERADFTKQ-LDSGFIDTFRNL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R N GWR+DYF+ S+ D+ IL D+ GSDH P+ L+ K
Sbjct: 190 YPDTVTYSWWSYRFHARANNAGWRIDYFVSSRDFKPYIQDAKILTDIMGSDHCPVELVTK 249
>gi|409996804|ref|YP_006751205.1| exodeoxyribonuclease [Lactobacillus casei W56]
gi|406357816|emb|CCK22086.1| Exodeoxyribonuclease [Lactobacillus casei W56]
Length = 290
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 118/180 (65%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYG+G+ +HD+EGR++T E+ +F+L++ Y PNSG L+RL YR +WD +Y
Sbjct: 110 EPLNVTYGMGVPEHDTEGRIITLEYPNFYLMTVYTPNSGGELKRLDYR-QQWDKDFLAYT 168
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L KKP++ GDLN AHQEID+ N N +AGFTDEER F L GF+DTFR
Sbjct: 169 NQLAAKKPLVYCGDLNVAHQEIDLKNDKTNHHNAGFTDEERADFTKQ-LDSGFIDTFRNL 227
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R N GWR+DYF+ S+ D+ IL D+ GSDH P+ L+ K
Sbjct: 228 YPDTVTYSWWSYRFHARANNAGWRIDYFVSSRDFKPYIQDAKILTDIMGSDHCPVELVTK 287
>gi|373452187|ref|ZP_09544104.1| exodeoxyribonuclease III (xth) [Eubacterium sp. 3_1_31]
gi|371967081|gb|EHO84557.1| exodeoxyribonuclease III (xth) [Eubacterium sp. 3_1_31]
Length = 251
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 122/180 (67%), Gaps = 7/180 (3%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP++VTY LGI +HD EGR++T E+++F+L+ Y PNS DGL RL YR+ +W+ +Y+
Sbjct: 72 KPIAVTYDLGIDEHDHEGRVITCEYENFYLVCVYTPNSKDGLLRLDYRM-QWEDDFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFR-- 119
L++KK VI+ GDLN AH+EID+ NP NRR+AGFTDEER GF+D+FR
Sbjct: 131 NALKEKKSVIVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERAKM-TTLQQSGFIDSFRYL 189
Query: 120 -AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G+ Y++W YR R+ N GWR+DYFLVS+ DK ++ I DV GSDH P+ L
Sbjct: 190 YPEQEGI--YSWWSYRFKAREKNAGWRIDYFLVSEDAKDKIQEASIHTDVFGSDHCPVSL 247
>gi|348524661|ref|XP_003449841.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like
[Oreochromis niloticus]
Length = 310
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 120/178 (67%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+ VTYG+G +HD EGR++TAEF SF+L++ YVPN+ GL RL YR T WD +Y+
Sbjct: 131 EPIKVTYGIGKEEHDKEGRVITAEFPSFYLVTAYVPNASRGLVRLDYRKT-WDVDFRAYL 189
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL+ +KP++L GDLN AHQEID+ NP GN+++AGFT EER+ F + L+ GFVD+FR
Sbjct: 190 SELDMQKPLVLCGDLNVAHQEIDLKNPKGNKKNAGFTPEEREGF-SQLLAAGFVDSFREL 248
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ YT+W Y R N GWRLDYF++S SL DS I GSDH PI L
Sbjct: 249 YPEQTNAYTFWTYMMNARSKNVGWRLDYFVLSSSLLPGLCDSKIRNKAMGSDHCPITL 306
>gi|150402181|ref|YP_001329475.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C7]
gi|150033211|gb|ABR65324.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C7]
Length = 249
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 121/181 (66%), Gaps = 2/181 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP +V G+ ++HD EGR++T EFD ++L++ Y PNS GL RL YR +WD +Y
Sbjct: 71 IKPNNVILGIKNTEHDGEGRVLTLEFDKYYLINVYTPNSQRGLTRLEYR-QKWDQDFLNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K LE +KPVI GDLN AH+EID+ NP N ++AGFT EER F N + GF+DTFR
Sbjct: 130 IKTLENEKPVIFCGDLNVAHKEIDLKNPKNNVKNAGFTPEERIGFD-NIVDSGFIDTFRE 188
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
++ Y++W YR R N GWR+DYF +S+ L D D++I+ +V GSDH P+G+I
Sbjct: 189 FNKEPDNYSWWSYRFNARSKNIGWRIDYFCISKILRDNLKDAFIMSEVMGSDHCPVGIIF 248
Query: 181 K 181
+
Sbjct: 249 E 249
>gi|418010415|ref|ZP_12650192.1| exodeoxyribonuclease III [Lactobacillus casei Lc-10]
gi|410553904|gb|EKQ27892.1| exodeoxyribonuclease III [Lactobacillus casei Lc-10]
Length = 252
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 118/180 (65%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYG+G+ +HD+EGR++T E+ +F+L++ Y PNSG L+RL YR +WD +Y
Sbjct: 72 EPLNVTYGMGVPEHDTEGRIITLEYPNFYLMTVYTPNSGGELKRLDYR-QQWDKDFLAYT 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L KKP++ GDLN AHQEID+ N N +AGFTDEER F L GF+DTFR
Sbjct: 131 NQLAAKKPLVYCGDLNVAHQEIDLKNDKTNHHNAGFTDEERADFTKQ-LDSGFIDTFRNL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R N GWR+DYF+ S+ D+ IL D+ GSDH P+ L+ K
Sbjct: 190 YPDTVTYSWWSYRFHARANNAGWRIDYFVSSRDFKPYIQDAKILTDIMGSDHCPVELVTK 249
>gi|150399093|ref|YP_001322860.1| exodeoxyribonuclease III Xth [Methanococcus vannielii SB]
gi|150011796|gb|ABR54248.1| exodeoxyribonuclease III Xth [Methanococcus vannielii SB]
Length = 257
Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 123/181 (67%), Gaps = 2/181 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I+P SV YG+ D EGR++T EF+ +FL++ Y PNS GL+RL R +WD ++
Sbjct: 79 IEPKSVKYGITNYKSDKEGRVITLEFEEYFLVNVYTPNSQRGLKRLECR-QKWDKDFLNH 137
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K LE+KKPVI GDLN AH+EID+ NP N ++AGFT EER F N ++ GF+DTFR
Sbjct: 138 LKTLEQKKPVIFCGDLNVAHKEIDLKNPKQNIKNAGFTKEERNGFD-NLINSGFLDTFRE 196
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W YR R+ N GWR+DYF +S+ L ++ D++I+ +V GSDH P+G+I+
Sbjct: 197 LNNEPENYTWWSYRFNAREKNIGWRIDYFCISKKLRERLKDAFIMSEVLGSDHCPVGIII 256
Query: 181 K 181
+
Sbjct: 257 E 257
>gi|293400493|ref|ZP_06644638.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305519|gb|EFE46763.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 253
Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 122/180 (67%), Gaps = 7/180 (3%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP++VTY LGI +HD EGR++T E+++F+L+ Y PNS DGL RL YR+ +W+ +Y+
Sbjct: 74 KPIAVTYDLGIDEHDHEGRVITCEYENFYLVCVYTPNSKDGLLRLDYRM-QWEDDFRAYL 132
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFR-- 119
L++KK VI+ GDLN AH+EID+ NP NRR+AGFTDEER GF+D+FR
Sbjct: 133 NALKEKKSVIVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERAKM-TTLQQSGFIDSFRYL 191
Query: 120 -AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G+ Y++W YR R+ N GWR+DYFLVS+ DK ++ I DV GSDH P+ L
Sbjct: 192 YPEQEGI--YSWWSYRFKAREKNAGWRIDYFLVSEDAKDKIQEASIHTDVFGSDHCPVSL 249
>gi|395502892|ref|XP_003755807.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase isoform 2
[Sarcophilus harrisii]
Length = 320
Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 118/181 (65%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL+VT+G+G +HD EGR++ AEF++F L++ YVPN+G GL RL YR WD + ++K
Sbjct: 141 PLNVTFGIGEEEHDQEGRVIVAEFEAFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 199
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L KKP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 200 GLNAKKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLTDSFRHLY 259
Query: 123 -RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+SQSL DS I GSDH PI L+L
Sbjct: 260 PEAAYAYTFWTYMMNARAKNVGWRLDYFLLSQSLLPALCDSKIRSKALGSDHCPITLLLA 319
Query: 182 L 182
L
Sbjct: 320 L 320
>gi|32475225|ref|NP_868219.1| exodeoxyribonuclease [Rhodopirellula baltica SH 1]
gi|32445766|emb|CAD78497.1| exodeoxyribonuclease [Rhodopirellula baltica SH 1]
Length = 256
Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 121/180 (67%), Gaps = 2/180 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++PL VT GL I +HD+EGR++T FD F L++ Y PNS GL RL YR+ +WD + Y
Sbjct: 78 VEPLKVTKGLSIEEHDNEGRVLTTTFDDFHLVNVYTPNSQRGLARLDYRM-QWDEAFLDY 136
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK+L ++KPV+ GD+NCAH+EID+ NP NR++AGF+D+ER A GF+D+FR
Sbjct: 137 VKKLNRRKPVLFCGDVNCAHKEIDLANPKANRKNAGFSDQERAGLDA-VTEAGFIDSFRQ 195
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
H G Y++W YR R N GWRLDYF V+++ D+ D+ I ++ GSDH P+ L L
Sbjct: 196 FHDGPGHYSWWTYRSDARARNIGWRLDYFWVAKNFWDRVADARIRCEIHGSDHCPVELTL 255
>gi|116493341|ref|YP_805076.1| exonuclease III [Pediococcus pentosaceus ATCC 25745]
gi|116103491|gb|ABJ68634.1| Exonuclease III [Pediococcus pentosaceus ATCC 25745]
Length = 251
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 121/182 (66%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+V YGLGI +HD EGR++T EF+ F++++CY PNS L+RL YR+ WD + +Y+
Sbjct: 72 KPLAVRYGLGIEEHDQEGRIITLEFEKFYVITCYTPNSQPKLKRLEYRMA-WDDAFRAYI 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L + KPVI GDLN AHQEID+ N N ++AGFTDEER F L+ GF DT+R
Sbjct: 131 DQLNQHKPVIFCGDLNVAHQEIDLKNDKTNHKNAGFTDEERNKF-TQLLNSGFTDTYRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R N GWR+DYF+ S++L K D+ I ++ GSDH P+ L L
Sbjct: 190 YPSKEGVYSWWSYRFNARANNAGWRIDYFVSSKALDQKLTDAQIHTEIFGSDHCPVELDL 249
Query: 181 KL 182
+
Sbjct: 250 DI 251
>gi|251779069|ref|ZP_04821989.1| exodeoxyribonuclease III [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243083384|gb|EES49274.1| exodeoxyribonuclease III [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 251
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 121/181 (66%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+++ G+GI +HD EGR++T EF+ F+L++ Y PNS L R+ YR+ W+ Y+
Sbjct: 73 KPLNISLGIGIEEHDKEGRVLTLEFEEFYLVNVYTPNSQQKLARIDYRMA-WENDFRHYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL K K VI+ GDLN AH+EID+ NP NR +AGF+DEER+ FG L GF+DT+R
Sbjct: 132 NELNKDKSVIVCGDLNVAHKEIDLKNPKNNRNNAGFSDEEREKFGE-LLKSGFIDTYRYF 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G G Y++W YR R N GWR+DYFLVS+ D+ D+ I + GSDH P+ LI+
Sbjct: 191 YPGKEGAYSWWSYRFNARANNAGWRIDYFLVSKDFEDRLVDANIHTQIEGSDHCPVELII 250
Query: 181 K 181
K
Sbjct: 251 K 251
>gi|395502890|ref|XP_003755806.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase isoform 1
[Sarcophilus harrisii]
Length = 321
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 118/181 (65%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL+VT+G+G +HD EGR++ AEF++F L++ YVPN+G GL RL YR WD + ++K
Sbjct: 142 PLNVTFGIGEEEHDQEGRVIVAEFEAFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 200
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L KKP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 201 GLNAKKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLTDSFRHLY 260
Query: 123 -RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+SQSL DS I GSDH PI L+L
Sbjct: 261 PEAAYAYTFWTYMMNARAKNVGWRLDYFLLSQSLLPALCDSKIRSKALGSDHCPITLLLA 320
Query: 182 L 182
L
Sbjct: 321 L 321
>gi|198420194|ref|XP_002123983.1| PREDICTED: similar to APEX nuclease (multifunctional DNA repair
enzyme) 1 [Ciona intestinalis]
Length = 337
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 86/183 (46%), Positives = 121/183 (66%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPL V +G+G+ +HD EGR +TAE+D F+L+S YVPN+ GL+RL YR+ +W+ +Y
Sbjct: 156 VKPLEVKFGIGVEEHDQEGRTITAEYDKFYLVSTYVPNAQRGLKRLEYRL-KWNSDFLAY 214
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K L++KKPV+L GD+N +H EID+ NP GN+++AGF+ EER L GF DT+R
Sbjct: 215 IKSLDEKKPVVLCGDMNVSHHEIDLANPKGNKKNAGFSQEERDGM-TELLQSGFTDTYRD 273
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + G YT+W Y R N GWRLDYF++S D D+ I GSDH PI L+
Sbjct: 274 LYPDLTGQYTFWTYMGNCRAKNVGWRLDYFILSNKWKDNVCDNIIETSAMGSDHCPITLL 333
Query: 180 LKL 182
L +
Sbjct: 334 LAV 336
>gi|118375590|ref|XP_001020979.1| exodeoxyribonuclease III family protein [Tetrahymena thermophila]
gi|89302746|gb|EAS00734.1| exodeoxyribonuclease III family protein [Tetrahymena thermophila
SB210]
Length = 396
Score = 188 bits (477), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 121/181 (66%), Gaps = 1/181 (0%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
K +S+ G+ I++H++EGR++TAEFD F+L+ YVPN+G L RL YR+ +D +Y+
Sbjct: 197 KVISIKKGIDIAEHENEGRVLTAEFDKFYLVVVYVPNAGSELVRLDYRVNSFDKDFQNYL 256
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+ KK VIL GDLN AHQEIDI NP NR S GFT EER SF + FL G++DTFR
Sbjct: 257 NQLKLKKNVILCGDLNVAHQEIDIANPKSNRNSPGFTIEERNSF-SKFLESGWIDTFRFL 315
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ + Y++W R R++N GWR+DYF+V++ DS I ++ GSDH P+ IL
Sbjct: 316 YPETIKYSWWSVRTKARESNIGWRIDYFVVNKEFKSSIKDSMINNNIYGSDHCPVEFILN 375
Query: 182 L 182
L
Sbjct: 376 L 376
>gi|420424301|ref|ZP_14923369.1| exodeoxyribonuclease III [Helicobacter pylori Hp A-4]
gi|393039589|gb|EJB40616.1| exodeoxyribonuclease III [Helicobacter pylori Hp A-4]
Length = 250
Score = 188 bits (477), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ + +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLSVSYGIDMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFRKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFN-ELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|323342310|ref|ZP_08082542.1| exodeoxyribonuclease III [Erysipelothrix rhusiopathiae ATCC 19414]
gi|322463422|gb|EFY08616.1| exodeoxyribonuclease III [Erysipelothrix rhusiopathiae ATCC 19414]
Length = 252
Score = 188 bits (477), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 85/183 (46%), Positives = 123/183 (67%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPL+VTYG+ +H++EGR++T E+D FFL+ Y PNS L+R+ YR+ +W+ Y
Sbjct: 72 IKPLNVTYGIQEDEHNTEGRVITCEYDDFFLVCVYTPNSQPELKRIDYRM-QWEDDFREY 130
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K L++ KPV+L GDLN AH+EID+ NP+ NR++ GF+D+ER+ F N L GF+D+FR
Sbjct: 131 LKMLDETKPVVLCGDLNVAHKEIDLKNPSANRKNPGFSDQEREQF-TNLLDAGFIDSFRE 189
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
H + Y++W YR R N GWR+DYF+VS+ L + + IL V GSDH P+ +
Sbjct: 190 LHPNAIDRYSWWSYRANARSRNTGWRIDYFVVSERLRNAIEAADILDQVLGSDHCPVMIK 249
Query: 180 LKL 182
L
Sbjct: 250 LNF 252
>gi|420473134|ref|ZP_14971815.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-18]
gi|393086638|gb|EJB87312.1| exodeoxyribonuclease III [Helicobacter pylori Hp H-18]
Length = 250
Score = 188 bits (477), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+ I +HD EGR++T EF+ F+L++ Y PNS L RL+YR++ W+ ++
Sbjct: 72 EPLSVSYGIDIKEHDKEGRVITCEFELFYLVNVYTPNSQQALSRLNYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER+ F + L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKF-SELLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKMRLKDALIYKDILGSDHCPVGLEL 249
>gi|417303374|ref|ZP_12090432.1| exodeoxyribonuclease III [Rhodopirellula baltica WH47]
gi|421610893|ref|ZP_16052058.1| exodeoxyribonuclease III [Rhodopirellula baltica SH28]
gi|440713979|ref|ZP_20894567.1| exodeoxyribonuclease III [Rhodopirellula baltica SWK14]
gi|327540346|gb|EGF26932.1| exodeoxyribonuclease III [Rhodopirellula baltica WH47]
gi|408498347|gb|EKK02841.1| exodeoxyribonuclease III [Rhodopirellula baltica SH28]
gi|436441175|gb|ELP34441.1| exodeoxyribonuclease III [Rhodopirellula baltica SWK14]
Length = 256
Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 120/180 (66%), Gaps = 2/180 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++PL VT GL I +HD+EGR++T FD F L++ Y PNS GL RL YR+ +WD + Y
Sbjct: 78 VEPLKVTKGLSIEEHDNEGRVLTTTFDDFHLVNVYTPNSQRGLARLDYRM-QWDEAFLDY 136
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK+L ++KPV+ GD+NCAH+EID+ NP NR++AGF+D+ER A GF+D+FR
Sbjct: 137 VKKLNRRKPVLFCGDVNCAHKEIDLANPKANRKNAGFSDQERAGLDA-VTEAGFIDSFRQ 195
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
H G Y++W YR R N GWRLDYF V++ D+ D+ I ++ GSDH P+ L L
Sbjct: 196 FHDGPGHYSWWTYRSDARARNIGWRLDYFWVAKKFWDRVADARIRCEIHGSDHCPVELTL 255
>gi|375086371|ref|ZP_09732783.1| exodeoxyribonuclease III (xth) [Megamonas funiformis YIT 11815]
gi|374565408|gb|EHR36677.1| exodeoxyribonuclease III (xth) [Megamonas funiformis YIT 11815]
Length = 251
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 122/183 (66%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++PL+V+YGLGI +HD EGR++T EFD FF++ Y PNS L RL YR+ +W+ + +Y
Sbjct: 71 VEPLNVSYGLGIEEHDHEGRVITLEFDKFFMVCVYTPNSKRELERLDYRM-QWEDAFRNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ EL K+KPV++ GDLN AH+EID+ NP NRRSAGFTDEER L GFVDTFR
Sbjct: 130 LVELNKQKPVVMCGDLNVAHKEIDLKNPKTNRRSAGFTDEERSKM-TELLQAGFVDTFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ Y++W Y R+ N GWR+DYF+VS+ + + ++ I + GSDH P+ L
Sbjct: 189 LYPDKTSIYSWWSYMRKARENNAGWRIDYFIVSKDIEENIKEAGIHNEFFGSDHCPVSLE 248
Query: 180 LKL 182
L +
Sbjct: 249 LDI 251
>gi|110801105|ref|YP_695823.1| exodeoxyribonuclease III [Clostridium perfringens ATCC 13124]
gi|110675752|gb|ABG84739.1| exodeoxyribonuclease III [Clostridium perfringens ATCC 13124]
Length = 250
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 124/181 (68%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V YG+ + HD EGR++T EF+ F+++ Y PNS L RL YR+ EW+ +Y+
Sbjct: 72 EPLNVYYGINMEHHDKEGRVITLEFEDLFMVTVYTPNSQSELARLEYRM-EWEDDFRNYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL KK V++ GDLN AH+EID+ NP NR++AGFTDEER F + LS GF+DTFR
Sbjct: 131 LELSSKKGVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDKF-STLLSSGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR RK N GWR+DYFLVS +L D+ ++ I ++ GSDH P+ LI+
Sbjct: 190 NPDLEGVYSWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASIDTEILGSDHCPVKLIM 249
Query: 181 K 181
+
Sbjct: 250 E 250
>gi|348027881|ref|YP_004870567.1| exodeoxyribonuclease III [Glaciecola nitratireducens FR1064]
gi|347945224|gb|AEP28574.1| Exodeoxyribonuclease III [Glaciecola nitratireducens FR1064]
Length = 254
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 124/183 (67%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I+P+ VT +GI +HD EGR++ AEF +L++ Y PNSG+ L+RLSYR +WD SY
Sbjct: 74 IQPIDVTKDMGIEEHDQEGRVLCAEFSDLYLVTVYTPNSGNDLKRLSYR-AQWDADFLSY 132
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGN-RRSAGFTDEERQSFGANFLSKGFVDTFR 119
+K+LE+KKPV++ GDLN AH++ID+ P N +SAG+T +E N ++ G+VDTFR
Sbjct: 133 IKKLEEKKPVVICGDLNAAHRDIDLARPKPNYNKSAGYTQQEIDGID-NLVAAGYVDTFR 191
Query: 120 AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
H V Y++W YR G R+ N GWR+DYFLVS L + HD+ I D+ GSDH P+ +
Sbjct: 192 YVHPEKVKYSWWSYRAGARERNVGWRIDYFLVSPKLQGQIHDAEIHNDIHGSDHCPVSVQ 251
Query: 180 LKL 182
L +
Sbjct: 252 LSI 254
>gi|242004144|ref|XP_002422991.1| Recombination repair protein, putative [Pediculus humanus corporis]
gi|212505907|gb|EEB10253.1| Recombination repair protein, putative [Pediculus humanus corporis]
Length = 332
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/183 (50%), Positives = 123/183 (67%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLSV G+G +HD+EGR++TAE++ F+L++ YVPN+G GL L R+ +WD + Y
Sbjct: 150 LKPLSVKIGIGHKEHDTEGRVITAEYEDFYLVTAYVPNAGRGLVTLPKRL-KWDVAFKGY 208
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K+L+ +KPVIL GDLN AH EID+ NP+ N ++AGFT EER F L+ GF+DTFR
Sbjct: 209 LKKLDSEKPVILCGDLNVAHNEIDLKNPSTNTKTAGFTQEERDGF-TKLLNAGFIDTFRK 267
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G YTYW Y R N GWRLDYF+VS+ + DS I +V GSDH PI L
Sbjct: 268 LYPNKEGAYTYWNYIGNARSRNAGWRLDYFVVSERIMSTVCDSVIRKEVYGSDHCPITLF 327
Query: 180 LKL 182
+ L
Sbjct: 328 VAL 330
>gi|291222020|ref|XP_002731016.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 338
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 124/181 (68%), Gaps = 3/181 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++P+SVTYG+GI+ HD EGR +TAE++ F+ +S Y+PN+G GL+RLSYR EWD Y
Sbjct: 158 VEPISVTYGIGINKHDKEGRCITAEYEKFYFISTYIPNAGKGLKRLSYR-QEWDKDFREY 216
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K+L++KKP+I GDLN AHQEID+ NP N+++AGF+ EER+ F L G VD++R
Sbjct: 217 MKKLDEKKPIIWCGDLNVAHQEIDLTNPKTNKKTAGFSKEEREGF-TKHLEIGLVDSYRH 275
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G +++W Y R N GWRLDYF++S+ L DS I V GSDH+PI L
Sbjct: 276 LNPEKTGEWSFWTYMMNARGKNIGWRLDYFVLSKRLLPCLCDSIIRSQVYGSDHAPIVLF 335
Query: 180 L 180
+
Sbjct: 336 M 336
>gi|363893404|ref|ZP_09320502.1| exodeoxyribonuclease [Eubacteriaceae bacterium ACC19a]
gi|361963708|gb|EHL16774.1| exodeoxyribonuclease [Eubacteriaceae bacterium ACC19a]
Length = 251
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP+ V YGLGI +HD EGRL+T E++++++ + Y PN+ L RL+YR +W+ Y
Sbjct: 72 KPIDVHYGLGIEEHDMEGRLITLEYENYYIATVYTPNAQPELARLAYR-QKWEDDFREYF 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+L++KKPVI+ GD+N AHQEID+ NP NR++ GF+DEER+ F FL+ GF+DTFR
Sbjct: 131 KKLDEKKPVIICGDMNVAHQEIDLKNPKNNRKNPGFSDEEREKFTI-FLNAGFIDTFRYI 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W YR RK N GWR+DYF VS L +K + I DV GSDH P+ + +
Sbjct: 190 YPDKTDEYSWWSYRFNARKNNAGWRIDYFCVSDRLKEKLKSASIHQDVMGSDHCPVSIEI 249
Query: 181 KL 182
+L
Sbjct: 250 EL 251
>gi|315917146|ref|ZP_07913386.1| exodeoxyribonuclease III [Fusobacterium gonidiaformans ATCC 25563]
gi|313691021|gb|EFS27856.1| exodeoxyribonuclease III [Fusobacterium gonidiaformans ATCC 25563]
Length = 250
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 121/181 (66%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV+YGLGI +HD EGR++T EF+ F++++ Y PNS + L RL YR+ W+ SY+
Sbjct: 72 EPISVSYGLGIEEHDQEGRVITLEFEDFYMVTVYTPNSKNELERLDYRMV-WEDEFRSYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L + KPV++ GD+N AH+EID+ NP NRR+AGFTDEER F L GF D+FR
Sbjct: 131 AKLNEAKPVVVCGDMNVAHEEIDLKNPKTNRRNAGFTDEERSKF-TELLKAGFTDSFRYL 189
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR RK N GWR+DYF+VS ++ ++ I + GSDH P+ L L
Sbjct: 190 YPDRLHAYSWWSYRANARKNNTGWRIDYFVVSNDWKEQIQEAEIHAEQEGSDHCPVALYL 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|427406978|ref|ZP_18897183.1| exodeoxyribonuclease III (xth) [Selenomonas sp. F0473]
gi|425707453|gb|EKU70497.1| exodeoxyribonuclease III (xth) [Selenomonas sp. F0473]
Length = 250
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 121/181 (66%), Gaps = 3/181 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++PLSV YG+G +HD EGR++T EF+ +L++ Y PN+ L RL YR+ W+ + ++
Sbjct: 71 VQPLSVAYGIGAPEHDDEGRVITMEFEELYLVTVYTPNAKRALERLDYRMA-WEDAFRAF 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ L KKPV++ GDLN AH+EID+ NP NR +AGFTDEER FG L+ GFVDTFRA
Sbjct: 130 LLNLRAKKPVVVCGDLNVAHKEIDLKNPKSNRHNAGFTDEERGKFG-ELLAAGFVDTFRA 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G YT+W Y R+TN GWR+DYFLVS+ L + + I D+ GSDH P+ L
Sbjct: 189 LYPDRRGAYTWWSYLRHARETNAGWRIDYFLVSEELRGRVAAAEIHADIFGSDHCPVSLT 248
Query: 180 L 180
L
Sbjct: 249 L 249
>gi|420488041|ref|ZP_14986644.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-8]
gi|420521916|ref|ZP_15020345.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-8b]
gi|393101431|gb|EJC02003.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-8]
gi|393126486|gb|EJC26937.1| exodeoxyribonuclease III [Helicobacter pylori Hp P-8b]
Length = 250
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V+YG+ + +HD EGR++T EF+SF+L++ Y PNS L RLSYR++ W+ ++
Sbjct: 72 EPLNVSYGIDMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSRLSYRMS-WEVEFKKFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE KKPVI+ GDLN AH EID+ NP NR++AGF+DEER F L+ GF+DTFR
Sbjct: 131 KALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFNE-LLNAGFIDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R + GWR+DYFL S L + D+ I D+ GSDH P+GL L
Sbjct: 190 YPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249
>gi|449135634|ref|ZP_21771081.1| exodeoxyribonuclease III [Rhodopirellula europaea 6C]
gi|448885688|gb|EMB16112.1| exodeoxyribonuclease III [Rhodopirellula europaea 6C]
Length = 256
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 119/180 (66%), Gaps = 2/180 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KP VT GL I +HD+EGR++T FD F L++ Y PNS GL RL YR+ +WD + Y
Sbjct: 78 VKPSKVTKGLNIEEHDNEGRVLTTTFDDFHLVNVYTPNSQRGLARLDYRM-QWDEAFLDY 136
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK+L ++KPV+ GD+NCAH+EID+ NP NR++AGF+D+ER A GF+D+FR
Sbjct: 137 VKKLNRRKPVLFCGDVNCAHKEIDLANPKANRKNAGFSDQERAGLDA-ITEAGFIDSFRQ 195
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
H G Y++W YR R N GWRLDYF V++ D+ D+ I ++ GSDH P+ L L
Sbjct: 196 FHDGPGHYSWWTYRSDARARNIGWRLDYFWVAKKFWDRVADAQIRCEIHGSDHCPVELTL 255
>gi|418001612|ref|ZP_12641751.1| exodeoxyribonuclease III [Lactobacillus casei UCD174]
gi|410546206|gb|EKQ20470.1| exodeoxyribonuclease III [Lactobacillus casei UCD174]
Length = 252
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 118/180 (65%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYG+G+ +HD+EGR++T E+ +F+L++ Y PNSG L+RL YR +WD +Y
Sbjct: 72 EPLNVTYGMGVPEHDTEGRIITLEYPNFYLMTVYTPNSGGELKRLDYR-QQWDKDFLAYT 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L KKP++ GDLN AHQEID+ N N +AGFTDEER F L GF+DTFR
Sbjct: 131 NQLAAKKPLVYCGDLNVAHQEIDLKNDKTNHHNAGFTDEERADFTKQ-LDGGFIDTFRNL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R N GWR+DYF+ S+ D+ IL D+ GSDH P+ L+ K
Sbjct: 190 YPDTVTYSWWSYRFHARANNAGWRIDYFVSSRDFKPYIQDAKILTDIMGSDHCPVELVTK 249
>gi|363889335|ref|ZP_09316698.1| exodeoxyribonuclease [Eubacteriaceae bacterium CM5]
gi|361966758|gb|EHL19645.1| exodeoxyribonuclease [Eubacteriaceae bacterium CM5]
Length = 251
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP+ V YGLGI +HD EGRL+T E++++++ + Y PN+ L RL+YR +W+ Y
Sbjct: 72 KPIDVHYGLGIEEHDMEGRLITLEYENYYIATVYTPNAQPELARLAYR-QKWEDDFREYF 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+L++KKPVI+ GD+N AHQEID+ NP NR++ GF+DEER+ F FL+ GF+DTFR
Sbjct: 131 KKLDEKKPVIICGDMNVAHQEIDLKNPKNNRKNPGFSDEEREKFTM-FLNSGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W YR RK N GWR+DYF VS L +K + I DV GSDH P+ + +
Sbjct: 190 YPDKTDEYSWWSYRFNARKNNAGWRIDYFCVSDRLKEKLKSASIHQDVMGSDHCPVSIEI 249
Query: 181 KL 182
+L
Sbjct: 250 EL 251
>gi|375091411|ref|ZP_09737704.1| exodeoxyribonuclease III (xth) [Helcococcus kunzii ATCC 51366]
gi|374563511|gb|EHR34824.1| exodeoxyribonuclease III (xth) [Helcococcus kunzii ATCC 51366]
Length = 250
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 122/181 (67%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLS +YG+GI +HD EGR++T E++ F+L++CY PNS GL RL YR W+ +Y+
Sbjct: 72 EPLSHSYGIGIEEHDKEGRVITLEYEDFYLVTCYTPNSKRGLLRLDYRQV-WEDDFRNYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L K KPVIL GDLN AH+EID+ NP NRR+AGFTDEERQ F L GF+DTFR
Sbjct: 131 LKLNKTKPVILCGDLNVAHKEIDLANPKSNRRNAGFTDEERQKF-TELLDAGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W Y R+ N GWR+DYF+VS+ D+ D+ I + GSDH P+ L L
Sbjct: 190 YPDIPEMYSWWSYITKARERNVGWRIDYFVVSEDFEDRLLDASIHMEQEGSDHCPVVLYL 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|336066887|ref|YP_004561745.1| exodeoxyribonuclease III [Erysipelothrix rhusiopathiae str.
Fujisawa]
gi|334296833|dbj|BAK32704.1| exodeoxyribonuclease III [Erysipelothrix rhusiopathiae str.
Fujisawa]
Length = 251
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 85/183 (46%), Positives = 123/183 (67%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPL+VTYG+ +H++EGR++T E+D FFL+ Y PNS L+R+ YR+ +W+ Y
Sbjct: 71 IKPLNVTYGIQEDEHNTEGRVITCEYDDFFLVCVYTPNSQPELKRIDYRM-QWEDDFREY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K L++ KPV+L GDLN AH+EID+ NP+ NR++ GF+D+ER+ F N L GF+D+FR
Sbjct: 130 LKMLDETKPVVLCGDLNVAHKEIDLKNPSANRKNPGFSDQEREQF-TNLLDAGFIDSFRE 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
H + Y++W YR R N GWR+DYF+VS+ L + + IL V GSDH P+ +
Sbjct: 189 LHPNAIDRYSWWSYRANARSRNIGWRIDYFVVSERLRNAIEAADILDQVLGSDHCPVMIK 248
Query: 180 LKL 182
L
Sbjct: 249 LNF 251
>gi|329769257|ref|ZP_08260674.1| exodeoxyribonuclease [Gemella sanguinis M325]
gi|328839251|gb|EGF88834.1| exodeoxyribonuclease [Gemella sanguinis M325]
Length = 254
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VTYG+GI +HD+EGR++T E+D+FF ++ Y PNSG L+RL YR++ W+ Y+
Sbjct: 72 KPLNVTYGIGIEEHDTEGRVITLEYDNFFFITVYTPNSGSELKRLEYRMS-WEDDFKDYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L K K VI+ GDLN AH EID+ NP N ++AGFT EER+ F L GF+DTFR
Sbjct: 131 LTLNKDKGVIVCGDLNVAHTEIDLKNPKTNVKNAGFTPEEREKF-TKLLDAGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR RK N GWR+DYFLVS+ L + I D+ GSDH P+ L+L
Sbjct: 190 NPDLTGAYSWWSYRFNARKNNSGWRIDYFLVSKDLKKYLVSAKIHNDIFGSDHCPVELVL 249
>gi|417986286|ref|ZP_12626858.1| exodeoxyribonuclease III [Lactobacillus casei 32G]
gi|410526479|gb|EKQ01366.1| exodeoxyribonuclease III [Lactobacillus casei 32G]
Length = 252
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 119/180 (66%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYG+G+ +HD+EGR++T E+ +F+L++ Y PNSG L+RL YR +WD +Y
Sbjct: 72 EPLNVTYGMGVPEHDTEGRIITLEYPNFYLMTVYTPNSGGELKRLDYR-QQWDKDFLAYT 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L KKP++ GDLN AHQEID+ N N +AGFTDEER F L GF+DTFR
Sbjct: 131 NQLAAKKPLVYCGDLNVAHQEIDLKNDKTNHHNAGFTDEERADFTKQ-LDSGFIDTFRNL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R N GWR+DYF+ S++ D+ IL ++ GSDH P+ L+ K
Sbjct: 190 YPDTVTYSWWSYRFHARANNAGWRIDYFVSSRNFKPYIQDAKILTEIMGSDHCPVELVTK 249
>gi|452992928|emb|CCQ95587.1| apurinic/apyrimidinic endonuclease [Clostridium ultunense Esp]
Length = 250
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 120/181 (66%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL V YGLGI +HD EGR++T EF+ F+L++ Y PNS L RL YR+T W+ +Y+
Sbjct: 72 KPLDVKYGLGIEEHDKEGRVITLEFEDFYLVNVYTPNSQRELTRLDYRMT-WEDEFRNYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
KEL+ KPVIL GDLN AH+EID+ NP+ NRR+AGFTDEER L GF+DTFR
Sbjct: 131 KELDSIKPVILCGDLNVAHKEIDLKNPSTNRRNAGFTDEERGKM-TELLGTGFIDTFRYF 189
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYF+VS+ D+ D+ I ++ GSDH P+ L +
Sbjct: 190 YPDKEDAYTWWSYMRKARDRNVGWRIDYFIVSERFKDRLKDAQIHSEIMGSDHCPVMLEI 249
Query: 181 K 181
+
Sbjct: 250 E 250
>gi|406027905|ref|YP_006726737.1| exodeoxyribonuclease III [Lactobacillus buchneri CD034]
gi|405126394|gb|AFS01155.1| exodeoxyribonuclease III [Lactobacillus buchneri CD034]
Length = 256
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 120/181 (66%), Gaps = 3/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL VTYG+ + + EGR +T E+ F+L++ YVPNSG GL+RL +R+ W+ + Y+
Sbjct: 73 PLDVTYGINSDEFNHEGRAITLEYPDFYLVTSYVPNSGAGLKRLDFRMG-WNKAFYQYLT 131
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
EL+ KKPVIL GDLN AH+EID+ NP N +AGFTDEERQ F N L GF+DTFR +
Sbjct: 132 ELDAKKPVILCGDLNVAHKEIDLKNPQSNHHNAGFTDEERQDF-TNLLKAGFMDTFRHFY 190
Query: 123 RGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
Y++W YR R N GWR+DYF+ S LAD+ DS IL DV GSDH P+ L K
Sbjct: 191 PDQTDIYSWWSYRFHSRDRNAGWRIDYFVASNRLADEIEDSKILTDVFGSDHCPVELDTK 250
Query: 182 L 182
L
Sbjct: 251 L 251
>gi|392987530|ref|YP_006486123.1| exodeoxyribonuclease [Enterococcus hirae ATCC 9790]
gi|392334950|gb|AFM69232.1| exodeoxyribonuclease [Enterococcus hirae ATCC 9790]
Length = 250
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 125/179 (69%), Gaps = 3/179 (1%)
Query: 4 LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKE 63
L+V+YG+GI HD EGRL+T E+ FFL++CY PNS + L+RL YR+ +W+ + Y++E
Sbjct: 74 LNVSYGMGIDLHDQEGRLITLEYPEFFLVTCYTPNSQNELKRLDYRL-QWEEAFYHYLEE 132
Query: 64 LEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHR 123
L+K+KPVI+ GDLN AHQEID+ N N+++AGFT EER +F ++ L+ GF+DTFR +
Sbjct: 133 LKKQKPVIVCGDLNVAHQEIDLKNWKTNQKNAGFTMEERTAF-SHLLANGFIDTFRYFYP 191
Query: 124 GVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
G Y++W YR RK N GWR+DYFL S L + D+ I + GSDH P+ L LK
Sbjct: 192 EQTGIYSWWSYRFNARKNNAGWRIDYFLTSDELKPRLIDAKIHTSIMGSDHCPVELDLK 250
>gi|317058758|ref|ZP_07923243.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_5R]
gi|313684434|gb|EFS21269.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_5R]
Length = 250
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 121/181 (66%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV+YGLGI +HD EGR++T EF+ F++++ Y PNS + L RL YR+ W+ SY+
Sbjct: 72 EPISVSYGLGIEEHDQEGRVITLEFEDFYMVTVYTPNSKNELERLDYRMI-WEDEFRSYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L + KPV++ GD+N AH+EID+ NP NRR+AGFTDEER F L GF D+FR
Sbjct: 131 AKLNEAKPVVVCGDMNVAHEEIDLKNPKTNRRNAGFTDEERTKF-TELLKAGFTDSFRYL 189
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR RK N GWR+DYF+VS ++ ++ I + GSDH P+ L L
Sbjct: 190 YPDRLHAYSWWSYRANARKNNTGWRIDYFVVSNDWKEQIQEAEIHAEQEGSDHCPVALYL 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|383862977|ref|XP_003706959.1| PREDICTED: recombination repair protein 1-like [Megachile
rotundata]
Length = 336
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP+ + YGL S+ D EGRL+TAE+ +F+ L+ YVPN+G L L R+ +W+ + SYV
Sbjct: 157 KPIDIQYGLKNSEFDDEGRLITAEYPNFYFLNVYVPNAGQKLVTLPKRL-QWNEAFKSYV 215
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+L++KKPVI+ GD+N AHQEID+ NP N ++AGFT EER+ +FL+ GFVDTFR+
Sbjct: 216 KQLDEKKPVIICGDMNVAHQEIDLTNPKTNTKNAGFTKEEREGM-TDFLAAGFVDTFRSL 274
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G YT+W Y R N GWRLDYFLVS+ + +K D+ I + GSDH PI L +
Sbjct: 275 YPDKTGAYTFWSYFANARSKNIGWRLDYFLVSEKIKNKVCDNVIRDKIYGSDHCPIVLFV 334
Query: 181 KL 182
+
Sbjct: 335 NI 336
>gi|410622567|ref|ZP_11333400.1| exodeoxyribonuclease III [Glaciecola pallidula DSM 14239 = ACAM
615]
gi|410157921|dbj|GAC28774.1| exodeoxyribonuclease III [Glaciecola pallidula DSM 14239 = ACAM
615]
Length = 255
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/183 (49%), Positives = 124/183 (67%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KP+ VT +GI +HD EGR++ AEFD+F+L++ Y PNSGD L+RLSYR T+WD SY
Sbjct: 74 VKPIDVTRDIGIEEHDQEGRVLCAEFDAFYLVTVYTPNSGDSLKRLSYR-TQWDADFLSY 132
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGN-RRSAGFTDEERQSFGANFLSKGFVDTFR 119
VK+LE KPV++ GDLN AH++IDI P N +SAG+T +E + ++ G+VDTFR
Sbjct: 133 VKQLEALKPVVVCGDLNVAHRDIDIARPKPNYNKSAGYTQKEIDGIDS-LIAAGYVDTFR 191
Query: 120 AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
V Y++W YR G R+ N GWRLDYFLVS L ++ + I D+ GSDH P+ +
Sbjct: 192 HLFPDTVKYSWWSYRAGARERNVGWRLDYFLVSHKLKEQISGADIHNDIHGSDHCPVSVQ 251
Query: 180 LKL 182
L L
Sbjct: 252 LSL 254
>gi|317496610|ref|ZP_07954957.1| exodeoxyribonuclease III [Gemella morbillorum M424]
gi|316913275|gb|EFV34774.1| exodeoxyribonuclease III [Gemella morbillorum M424]
Length = 254
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+V YG+GI +HD+EGR++T E+D FF ++ Y PNSG L+RL YR+T W+ +Y+
Sbjct: 72 KPLNVNYGIGIDEHDTEGRVITLEYDKFFFITVYTPNSGSELKRLDYRMT-WEEDFKNYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL K K V++ GDLN AH EID+ NP N ++AGFT EER+ F L GF+DTFR
Sbjct: 131 LELNKTKGVVVCGDLNVAHTEIDLKNPKSNTKNAGFTPEEREKF-TKLLDAGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR RK N GWR+DYFL S+ L + I D+ GSDH P+ ++L
Sbjct: 190 NPELTGAYSWWSYRFNARKNNAGWRIDYFLTSRDLEKYLVSAKIHNDILGSDHCPVEVVL 249
>gi|293376523|ref|ZP_06622751.1| exodeoxyribonuclease III [Turicibacter sanguinis PC909]
gi|292644749|gb|EFF62831.1| exodeoxyribonuclease III [Turicibacter sanguinis PC909]
Length = 251
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 123/181 (67%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL VTYGL I++HD EGR++T E++ F+L++ Y PNS + L RL YR+T W+ + +Y+
Sbjct: 72 EPLQVTYGLNIAEHDQEGRVITLEYNDFYLVTVYTPNSQNELARLDYRLT-WEEAFRNYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L+ KPVI+ GDLN AHQ+ID+ NP N ++AGFT EER L+ GF+DTFR
Sbjct: 131 IGLDVLKPVIVCGDLNVAHQQIDLKNPKTNTKNAGFTIEERNEM-TKLLNSGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W YR G R N GWR+DYF+ S++L + D+ I PDV GSDH P+GL L
Sbjct: 190 YPTKENCYSWWSYRAGARAKNVGWRIDYFITSKALESRLEDARIYPDVLGSDHCPVGLQL 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|125972979|ref|YP_001036889.1| exodeoxyribonuclease III Xth [Clostridium thermocellum ATCC 27405]
gi|256004776|ref|ZP_05429751.1| exodeoxyribonuclease III Xth [Clostridium thermocellum DSM 2360]
gi|385779105|ref|YP_005688270.1| exodeoxyribonuclease III Xth [Clostridium thermocellum DSM 1313]
gi|419721683|ref|ZP_14248840.1| exodeoxyribonuclease III [Clostridium thermocellum AD2]
gi|419725225|ref|ZP_14252277.1| exodeoxyribonuclease III [Clostridium thermocellum YS]
gi|125713204|gb|ABN51696.1| exodeoxyribonuclease III Xth [Clostridium thermocellum ATCC 27405]
gi|255991226|gb|EEU01333.1| exodeoxyribonuclease III Xth [Clostridium thermocellum DSM 2360]
gi|316940785|gb|ADU74819.1| exodeoxyribonuclease III Xth [Clostridium thermocellum DSM 1313]
gi|380771412|gb|EIC05280.1| exodeoxyribonuclease III [Clostridium thermocellum YS]
gi|380782260|gb|EIC11901.1| exodeoxyribonuclease III [Clostridium thermocellum AD2]
Length = 251
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 121/182 (66%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPL V G+GI +HD EGR++T EFD+++L++ Y PN+ L RL YR+ +W+ +Y
Sbjct: 72 IKPLCVQNGIGIDEHDREGRVITLEFDNYYLVNVYTPNAKKELERLDYRM-KWEDDFRNY 130
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ L+ KKPVI+ GD+N AH+EID+ NP NRRSAGFTDEER F L+ GF+DTFR
Sbjct: 131 LVGLKAKKPVIVCGDMNVAHKEIDLKNPESNRRSAGFTDEERAKF-TELLNAGFIDTFRF 189
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G YT+W Y R N GWR+DYF VS+ L D+ + I DV GSDH P+ L
Sbjct: 190 FYPDKTGAYTWWSYMFNARARNAGWRIDYFCVSEELKDRLVSASIHDDVMGSDHCPVELQ 249
Query: 180 LK 181
+K
Sbjct: 250 IK 251
>gi|257870107|ref|ZP_05649760.1| exodeoxyribonuclease [Enterococcus gallinarum EG2]
gi|257804271|gb|EEV33093.1| exodeoxyribonuclease [Enterococcus gallinarum EG2]
Length = 261
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%), Gaps = 3/178 (1%)
Query: 4 LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKE 63
L+ YG+GI +HD+EGR++T E+ FFL++CY PN+ + LRRL YR+T W+ + +Y+ +
Sbjct: 85 LAAHYGIGIEEHDAEGRVITLEYPEFFLVTCYTPNAQNELRRLDYRMT-WEDAFRAYLTD 143
Query: 64 LEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHR 123
L+++KPVIL GDLN AHQ ID+ N N+++AGFT EER+ F + LS GF DTFR +
Sbjct: 144 LKQQKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEEREKF-STLLSAGFTDTFRYFYP 202
Query: 124 GVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
G Y++W YR RK N GWR+DYF+VS L D+ D+ I ++ GSDH P+ L L
Sbjct: 203 DAEGIYSWWSYRFNARKNNAGWRIDYFVVSDDLNDRLVDAKIHTEILGSDHCPVELQL 260
>gi|237750354|ref|ZP_04580834.1| exodeoxyribonuclease LexA [Helicobacter bilis ATCC 43879]
gi|229373884|gb|EEO24275.1| exodeoxyribonuclease LexA [Helicobacter bilis ATCC 43879]
Length = 255
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 124/184 (67%), Gaps = 11/184 (5%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV +GI+ HD EGR++ AE+ +FFL++ Y PNS L RL+YR EW+ S++
Sbjct: 72 EPLSVCNDMGIAHHDKEGRIIVAEYATFFLVNVYTPNSKRELERLTYR-QEWEDDFRSFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFR-- 119
K LE+ KPVI+ GDLN AH+EID+ NP NRR+AGFTDEER+ L GF+D++R
Sbjct: 131 KGLEQYKPVIVCGDLNVAHKEIDLKNPKTNRRNAGFTDEEREKMSV-LLDSGFIDSYRYF 189
Query: 120 ---AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPI 176
+H YT+W Y R+ N GWR+DYFL+S+ LA +++I P++ GSDH P+
Sbjct: 190 YPDKEH----AYTWWSYMGKARQNNTGWRIDYFLLSRCLAKNLKEAHIYPEIMGSDHCPV 245
Query: 177 GLIL 180
G+++
Sbjct: 246 GIVI 249
>gi|319935137|ref|ZP_08009577.1| exodeoxyribonuclease III [Coprobacillus sp. 29_1]
gi|319809962|gb|EFW06345.1| exodeoxyribonuclease III [Coprobacillus sp. 29_1]
Length = 252
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 122/180 (67%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P++V YG+GI +HD EGRL+T EF+ F+ ++ Y PNS L RL YR W+ + +V
Sbjct: 72 EPMNVIYGMGIEEHDQEGRLITLEFEKFYFVAVYTPNSKRELERLDYRQV-WEDAFRQHV 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
++L++ KPV+L GDLN AH EID+ N N ++AGFTD+ER F + L+ GF+DTFR +
Sbjct: 131 QKLKESKPVVLCGDLNVAHNEIDLKNDKTNHKNAGFTDQERAKF-SELLNSGFIDTFRYK 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ Y++W Y R+ N GWR+DYF+VS+ L + D+YI ++ GSDH P+G+ L+
Sbjct: 190 YPETEMYSWWSYMFKAREKNAGWRIDYFVVSEDLKENIKDAYIYTEIMGSDHCPVGVELE 249
>gi|213512198|ref|NP_001135227.1| DNA-(apurinic or apyrimidinic site) lyase [Salmo salar]
gi|197631957|gb|ACH70702.1| APEX nuclease 1 [Salmo salar]
gi|209154634|gb|ACI33549.1| DNA-apurinic or apyrimidinic site lyase [Salmo salar]
gi|209154684|gb|ACI33574.1| DNA-apurinic or apyrimidinic site lyase [Salmo salar]
Length = 312
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 119/178 (66%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL VTYG+G +HD EGR++TAEF +FFL++ YVPNSG GL RL YR T WD +Y+
Sbjct: 133 EPLKVTYGIGKEEHDKEGRVITAEFPTFFLVTAYVPNSGRGLVRLDYRKT-WDVEFKAYL 191
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+K+KP++L GDLN AH+EID+ N GN+++AGFT EER+ F L+ GF D+FR
Sbjct: 192 SDLDKRKPLVLCGDLNVAHEEIDLKNSKGNKKNAGFTAEEREGFN-QLLAAGFTDSFREL 250
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ YT+W Y R N GWRLDYF++S +L DS I GSDH PI L
Sbjct: 251 YPEQANAYTFWTYMMNSRSKNVGWRLDYFVLSSALLPGLCDSKIRNQAMGSDHCPITL 308
>gi|404485198|ref|ZP_11020397.1| exodeoxyribonuclease III (xth) [Barnesiella intestinihominis YIT
11860]
gi|404338985|gb|EJZ65428.1| exodeoxyribonuclease III (xth) [Barnesiella intestinihominis YIT
11860]
Length = 252
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/183 (48%), Positives = 125/183 (68%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++P+SV+YG+ ++HD EGR++T E + FFL++ Y PNS +GL+RL YR+T W+ +
Sbjct: 72 LQPISVSYGMDRTEHDREGRIITLEMEDFFLVNVYTPNSQEGLKRLEYRMT-WEDDFLHF 130
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K+L+ +KPVI+ GDLN AHQEID+ NP NR++AGFTDEER F LS GF DTFR
Sbjct: 131 LKQLKTQKPVIVCGDLNVAHQEIDLKNPKTNRKNAGFTDEERYKF-TQLLSAGFTDTFRY 189
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ Y++W YR R+ N GWR+DYFL S SL +K + I ++ GSDH P+ L
Sbjct: 190 FYPNQKDIYSWWSYRFKAREKNAGWRIDYFLASASLNEKLCSAKIHTEIFGSDHCPVELE 249
Query: 180 LKL 182
+ L
Sbjct: 250 IDL 252
>gi|365854004|ref|ZP_09394256.1| exodeoxyribonuclease III [Lactobacillus parafarraginis F0439]
gi|363711540|gb|EHL95270.1| exodeoxyribonuclease III [Lactobacillus parafarraginis F0439]
Length = 250
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 121/181 (66%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV YG+ + D EGR +T E+ F+L++ YVPNSG GL+RL +R+ WD + Y+
Sbjct: 72 EPMSVMYGIQSDEFDHEGRAITLEYPDFYLVTSYVPNSGAGLKRLDFRMG-WDAAFQDYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L+K+KPVIL GDLN AH+ ID+ NP N +AGFTDEER SF FL GF+D+FR
Sbjct: 131 SRLDKEKPVILCGDLNVAHKTIDLKNPQSNHHNAGFTDEERDSF-TRFLDMGFMDSFRHF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR R N GWR+DYF+ S LA K DS IL D+ GSDH P+ LIL
Sbjct: 190 YPDMEDIYSWWSYRFHARDRNAGWRIDYFVTSNRLAPKIADSKILTDIYGSDHCPVALIL 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|293115606|ref|ZP_05792271.2| exodeoxyribonuclease III [Butyrivibrio crossotus DSM 2876]
gi|292809044|gb|EFF68249.1| exodeoxyribonuclease III [Butyrivibrio crossotus DSM 2876]
Length = 237
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSV YG+GI +HD EGR++T EF++F++++ Y PNS L RL YR+ +W+ +++
Sbjct: 58 KPLSVKYGIGIDEHDHEGRVITLEFENFYMVTVYTPNSQRELTRLEYRM-KWEDDFRNFL 116
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L K KPV++TGD+N AH+EID+ NP NR++AGFTDEERQ L GF+DTFR
Sbjct: 117 NDLRKTKPVVVTGDMNVAHKEIDLKNPKTNRKNAGFTDEERQKM-TELLDSGFIDTFRYF 175
Query: 122 HRGV-VGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ V Y++W Y R+ N GWR+DYFL S+ L D+ + I V GSDH PI L++
Sbjct: 176 YPDVEQKYSWWSYMFKSREKNAGWRIDYFLASKELEDRLISAEIHDKVLGSDHCPIELVI 235
Query: 181 KL 182
L
Sbjct: 236 DL 237
>gi|407473575|ref|YP_006787975.1| exodeoxyribonuclease III [Clostridium acidurici 9a]
gi|407050083|gb|AFS78128.1| exodeoxyribonuclease III [Clostridium acidurici 9a]
Length = 250
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 119/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP+ V YGLGI +HD EGR++T EF+ F+L++ Y PNS L RL YR+ +W+ Y+
Sbjct: 72 KPIEVKYGLGIEEHDQEGRVITLEFEDFYLVNVYTPNSQSELARLDYRM-KWEDIFREYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+L+ KPVIL GDLN AH+EID+ NP NR++AGFTDEER L GF D+FR
Sbjct: 131 KDLDNIKPVILCGDLNVAHKEIDLKNPKTNRKNAGFTDEERNKM-TELLESGFTDSFRYL 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W Y R+ N GWR+DYF+VS+ + DK D+ I ++ GSDH P+ L L
Sbjct: 190 YPEKEGSYSWWSYMRKARENNSGWRIDYFIVSEKMKDKIKDAQIHSNIMGSDHCPVMLEL 249
>gi|270290148|ref|ZP_06196374.1| exodeoxyribonuclease III [Pediococcus acidilactici 7_4]
gi|418069863|ref|ZP_12707140.1| exonuclease III [Pediococcus acidilactici MA18/5M]
gi|270281685|gb|EFA27517.1| exodeoxyribonuclease III [Pediococcus acidilactici 7_4]
gi|357536394|gb|EHJ20425.1| exonuclease III [Pediococcus acidilactici MA18/5M]
Length = 251
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 120/182 (65%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P++V+YGLGI + D EGR++T E++ FFL++CY PNS LRRL YR+ WD + +YV
Sbjct: 72 EPVAVSYGLGIPEFDQEGRVITLEYEEFFLVTCYTPNSQPELRRLDYRMN-WDDAFRAYV 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+L KPVI GDLN AH+EID+ N N +AGFTDEERQ F L GF DT+R
Sbjct: 131 KQLADTKPVIFCGDLNVAHEEIDLKNDRTNHHNAGFTDEERQKF-TELLQSGFTDTYRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R N GWR+DYF+ SQ+L + D+ I ++ GSDH PI L L
Sbjct: 190 YPDKEGVYSWWSYRFNARANNAGWRIDYFVTSQALDKQLADAKIHTEIFGSDHCPIELDL 249
Query: 181 KL 182
L
Sbjct: 250 NL 251
>gi|239631265|ref|ZP_04674296.1| exonuclease III [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|239525730|gb|EEQ64731.1| exonuclease III [Lactobacillus paracasei subsp. paracasei 8700:2]
Length = 252
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 117/180 (65%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYG+G+ +HD+EGR++T E+ +F+L++ Y PNSG L+RL YR +WD +Y
Sbjct: 72 EPLNVTYGMGVPEHDTEGRIITLEYPNFYLMTVYTPNSGGELKRLDYR-QQWDKDFLAYT 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L KKP++ GDLN AHQEID+ N N +A FTDEER F L GF+DTFR
Sbjct: 131 NQLAAKKPLVYCGDLNVAHQEIDLKNDKTNHHNASFTDEERADFTKQ-LDSGFIDTFRNL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R N GWR+DYF+ S+ D+ IL D+ GSDH P+ L+ K
Sbjct: 190 YPDTVTYSWWSYRFHARANNAGWRIDYFVSSRDFKPYIQDAKILTDIMGSDHCPVELVTK 249
>gi|13162337|ref|NP_077062.1| DNA-(apurinic or apyrimidinic site) lyase [Rattus norvegicus]
gi|1168468|sp|P43138.2|APEX1_RAT RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
Full=APEX nuclease; Short=APEN; AltName:
Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox
factor-1; Contains: RecName: Full=DNA-(apurinic or
apyrimidinic site) lyase, mitochondrial
gi|11878235|gb|AAG40859.1|AF309114_1 nuclease APEX [Rattus norvegicus]
gi|624915|dbj|BAA07938.1| APEX nuclease [Rattus norvegicus]
gi|5360709|dbj|BAA82124.1| Apex nuclease [Rattus norvegicus]
gi|50926078|gb|AAH78816.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Rattus
norvegicus]
gi|149033628|gb|EDL88426.1| apurinic/apyrimidinic endonuclease 1, isoform CRA_a [Rattus
norvegicus]
Length = 317
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 116/181 (64%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEF+SF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 138 PLKVSYGIGEEEHDQEGRVIVAEFESFILVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 196
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
+L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 197 DLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGEMLQAVPLADSFRHLY 256
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 257 PNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 316
Query: 182 L 182
L
Sbjct: 317 L 317
>gi|399925203|ref|ZP_10782561.1| exodeoxyribonuclease III [Peptoniphilus rhinitidis 1-13]
Length = 254
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV YG+GI +HD EGR++T EF++F+ ++CY PNS L RL YR W+ +Y+
Sbjct: 75 EPISVNYGIGIDEHDKEGRVITLEFENFYFVTCYTPNSKRKLERLDYRQV-WEDDFRNYL 133
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL K K VIL GDLN AH+EID+ NP+ NR+SAGFTDEER+ F L G++DTFR
Sbjct: 134 NELRKNKEVILCGDLNVAHKEIDLANPSTNRKSAGFTDEEREKF-TELLKNGYIDTFRYF 192
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W Y R+ N GWR+DYF+VS+ L D+ I +V GSDH P+ L +
Sbjct: 193 YPDLKDEYSWWSYFAKSRERNVGWRIDYFVVSEGLEKHLVDAKIHQEVMGSDHCPVELKI 252
Query: 181 KL 182
KL
Sbjct: 253 KL 254
>gi|351701700|gb|EHB04619.1| DNA-(apurinic or apyrimidinic site) lyase [Heterocephalus glaber]
Length = 318
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL VTYG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVTYGIGEEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLTDSFRHLY 257
Query: 123 -RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 258 PNAAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|406882429|gb|EKD30227.1| hypothetical protein ACD_78C00115G0011 [uncultured bacterium (gcode
4)]
Length = 254
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPLSV YG G+++HD+EGR++T EF+ +F ++ Y PN+ L RL YR WD Y
Sbjct: 75 IKPLSVRYGYGMAEHDTEGRIITLEFEEYFFVTVYTPNAKRELERLEYRQL-WDSLFFDY 133
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K LE +KPVI++GDLN AH++ID+ NP NR SAGFTDEER FG FLS GF+DTFR
Sbjct: 134 LKRLEAEKPVIVSGDLNVAHKDIDLSNPKANRGSAGFTDEERDGFG-KFLSDGFIDTFRH 192
Query: 121 QH-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ YT+W R N GWRLDYFL+S+ L ++ ++I ++ GSDH P+G+
Sbjct: 193 FYPNKTEEYTWWSNFFHARDRNIGWRLDYFLISEWLRERLKSAFIRQEIRGSDHCPVGVE 252
Query: 180 LK 181
+K
Sbjct: 253 IK 254
>gi|357050363|ref|ZP_09111563.1| exodeoxyribonuclease [Enterococcus saccharolyticus 30_1]
gi|355381448|gb|EHG28572.1| exodeoxyribonuclease [Enterococcus saccharolyticus 30_1]
Length = 250
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%), Gaps = 3/178 (1%)
Query: 4 LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKE 63
L+ YG+GI +HD+EGR++T E+ FFL++CY PN+ + LRRL YR+T W+ + +Y+ +
Sbjct: 74 LAAHYGIGIEEHDAEGRVITLEYPEFFLVTCYTPNAQNELRRLDYRMT-WEDAFRAYLTD 132
Query: 64 LEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHR 123
L+++KPVIL GDLN AHQ ID+ N N+++AGFT EER+ F + LS GF DTFR +
Sbjct: 133 LKQQKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEEREKF-STLLSAGFTDTFRYFYP 191
Query: 124 GVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
G Y++W YR RK N GWR+DYF+VS L D+ D+ I ++ GSDH P+ L L
Sbjct: 192 DAEGIYSWWSYRFNARKNNAGWRIDYFVVSDDLNDRLVDAKIHTEILGSDHCPVELQL 249
>gi|374997767|ref|YP_004973266.1| exodeoxyribonuclease III [Desulfosporosinus orientis DSM 765]
gi|357216133|gb|AET70751.1| exodeoxyribonuclease III [Desulfosporosinus orientis DSM 765]
Length = 250
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 121/180 (67%), Gaps = 7/180 (3%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P++V+YG+G+ +HD EGR++T E++ FFL++ Y PNS GL RL YR+ +W+ +Y+
Sbjct: 72 EPINVSYGIGMEEHDQEGRVITLEYEPFFLVTVYTPNSQRGLARLDYRM-KWEDDFLAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFR-- 119
K LEK KP+I GDLN AHQEID+ NP N+++AGFT EER F + L+ GF+D+FR
Sbjct: 131 KTLEKSKPIIFCGDLNVAHQEIDLKNPKTNKKNAGFTSEERDKF-SQVLNHGFIDSFRFF 189
Query: 120 -AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ R YT+W Y R N GWR+DYF VS L D+ + I DV GSDH P+GL
Sbjct: 190 YPEQRD--AYTWWSYMFNARANNAGWRIDYFCVSAGLKDQLKNVSIYSDVYGSDHCPVGL 247
>gi|332024107|gb|EGI64323.1| Recombination repair protein 1 [Acromyrmex echinatior]
Length = 356
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP+SV YGL S D+EGR++T EF FF+++ YVPN+G L L R+ EW+ ++
Sbjct: 177 KPISVKYGLNDSTFDTEGRIITVEFPEFFVINVYVPNAGQKLVTLPKRL-EWNKLFKKHI 235
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+EL++KKPVI+ GD+N AHQEID+ NP N ++AGFT EER +FL+ GF+DTFR+
Sbjct: 236 EELDQKKPVIICGDMNVAHQEIDLKNPKTNTKNAGFTKEERNDM-TDFLAAGFIDTFRSL 294
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G YT+W Y R N GWRLDYFL+S+ + +K D+ I DV GSDH P+ L +
Sbjct: 295 YPEIEGAYTFWSYFANARSKNIGWRLDYFLISERIKNKVCDNIIRKDVYGSDHCPVILYI 354
Query: 181 KL 182
L
Sbjct: 355 NL 356
>gi|365130338|ref|ZP_09341407.1| exodeoxyribonuclease III (xth) [Subdoligranulum sp. 4_3_54A2FAA]
gi|363620249|gb|EHL71547.1| exodeoxyribonuclease III (xth) [Subdoligranulum sp. 4_3_54A2FAA]
Length = 251
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/183 (50%), Positives = 124/183 (67%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++PLSV YG+G +H EGR +T EF+ FFL++ Y PNS + L RL YR+ +W+ L +Y
Sbjct: 71 MEPLSVRYGIGKEEHSHEGRAITLEFEQFFLVNVYTPNSQNELARLPYRM-QWEDDLRAY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ L+ +KPV+ GDLN AH+EID+ NP N SAGF+ EERQ + L GFVDTFRA
Sbjct: 130 LCALDTEKPVVYCGDLNVAHREIDLKNPKQNIHSAGFSYEERQKM-TDLLMSGFVDTFRA 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G YT+W Y R+TN GWR+DYF+VS+ L +K D+ I DV GSDH P+GL+
Sbjct: 189 LYPDAAGRYTWWSYFRRARETNAGWRIDYFIVSERLREKIGDALIYSDVYGSDHCPVGLV 248
Query: 180 LKL 182
L +
Sbjct: 249 LDV 251
>gi|425056645|ref|ZP_18460091.1| exodeoxyribonuclease III [Enterococcus faecium 505]
gi|403031334|gb|EJY42950.1| exodeoxyribonuclease III [Enterococcus faecium 505]
Length = 269
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 123/179 (68%), Gaps = 3/179 (1%)
Query: 4 LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKE 63
L+ TYG+GI HD+EGRL+T E+ FFL++CY PNS L+RL YR+ EW+ + +Y++
Sbjct: 93 LNATYGMGIDIHDTEGRLITLEYSDFFLVTCYTPNSQSELKRLDYRL-EWEEAFYNYLEN 151
Query: 64 LEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHR 123
L+K+KPVI+ GDLN AHQ ID+ N N+++AGFT EER + + L GF+DTFR +
Sbjct: 152 LKKQKPVIVCGDLNVAHQTIDLKNWKTNQKNAGFTPEERAAL-SRLLDNGFIDTFRYFYP 210
Query: 124 GVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
G Y++W YR RK N GWR+DYFL S+ LA + D+ I D+ GSDH P+ L LK
Sbjct: 211 TQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLAPRLADAKIHTDIMGSDHCPVELDLK 269
>gi|227552171|ref|ZP_03982220.1| exodeoxyribonuclease III [Enterococcus faecium TX1330]
gi|257892875|ref|ZP_05672528.1| exodeoxyribonuclease, partial [Enterococcus faecium 1,231,408]
gi|227178703|gb|EEI59675.1| exodeoxyribonuclease III [Enterococcus faecium TX1330]
gi|257829254|gb|EEV55861.1| exodeoxyribonuclease [Enterococcus faecium 1,231,408]
Length = 269
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 123/179 (68%), Gaps = 3/179 (1%)
Query: 4 LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKE 63
L+ TYG+GI HD+EGRL+T E+ FFL++CY PNS L+RL YR+ EW+ + +Y++
Sbjct: 93 LNATYGMGIDIHDTEGRLITLEYSDFFLVTCYTPNSQSELKRLDYRL-EWEEAFYNYLEN 151
Query: 64 LEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHR 123
L+K+KPVI+ GDLN AHQ ID+ N N+++AGFT EER + + L GF+DTFR +
Sbjct: 152 LKKQKPVIVCGDLNVAHQTIDLKNWKTNQKNAGFTPEERAAL-SRLLDNGFIDTFRYFYP 210
Query: 124 GVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
G Y++W YR RK N GWR+DYFL S+ LA + D+ I D+ GSDH P+ L LK
Sbjct: 211 TQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLAPRLADAKIHTDIMGSDHCPVELDLK 269
>gi|427440664|ref|ZP_18924936.1| exodeoxyribonuclease III [Pediococcus lolii NGRI 0510Q]
gi|425787371|dbj|GAC45724.1| exodeoxyribonuclease III [Pediococcus lolii NGRI 0510Q]
Length = 256
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 120/182 (65%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P++V+YGLGI + D EGR++T E++ FFL++CY PNS LRRL YR+ WD + +YV
Sbjct: 77 EPVAVSYGLGIPEFDQEGRVITLEYEEFFLVTCYTPNSQPELRRLDYRMN-WDDAFRAYV 135
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+L KPVI GDLN AH+EID+ N N +AGFTDEERQ F L GF DT+R
Sbjct: 136 KQLADTKPVIFCGDLNVAHEEIDLKNDRTNHHNAGFTDEERQKF-TELLQSGFTDTYRYF 194
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R N GWR+DYF+ SQ+L + D+ I ++ GSDH PI L L
Sbjct: 195 YPDKEGVYSWWSYRFNARANNAGWRIDYFVTSQALDKQLADAKIHTEIFGSDHCPIELDL 254
Query: 181 KL 182
L
Sbjct: 255 NL 256
>gi|424762341|ref|ZP_18189850.1| exodeoxyribonuclease III [Enterococcus faecium TX1337RF]
gi|402425021|gb|EJV57179.1| exodeoxyribonuclease III [Enterococcus faecium TX1337RF]
Length = 253
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 123/179 (68%), Gaps = 3/179 (1%)
Query: 4 LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKE 63
L+ TYG+GI HD+EGRL+T E+ FFL++CY PNS L+RL YR+ EW+ + +Y++
Sbjct: 77 LNATYGMGIDIHDTEGRLITLEYSDFFLVTCYTPNSQSELKRLDYRL-EWEEAFYNYLEN 135
Query: 64 LEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHR 123
L+K+KPVI+ GDLN AHQ ID+ N N+++AGFT EER + + L GF+DTFR +
Sbjct: 136 LKKQKPVIVCGDLNVAHQTIDLKNWKTNQKNAGFTPEERAAL-SRLLDNGFIDTFRYFYP 194
Query: 124 GVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
G Y++W YR RK N GWR+DYFL S+ LA + D+ I D+ GSDH P+ L LK
Sbjct: 195 TQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLAPRLADAKIHTDIMGSDHCPVELDLK 253
>gi|304385589|ref|ZP_07367933.1| exodeoxyribonuclease III [Pediococcus acidilactici DSM 20284]
gi|304328093|gb|EFL95315.1| exodeoxyribonuclease III [Pediococcus acidilactici DSM 20284]
Length = 251
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 120/182 (65%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P++V+YGLGI + D EGR++T E++ FFL++CY PNS LRRL YR+ WD + +YV
Sbjct: 72 EPVAVSYGLGIPEFDQEGRVITLEYEKFFLVTCYTPNSQPELRRLDYRMN-WDDAFRAYV 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+L KPVI GDLN AH+EID+ N N +AGFTDEERQ F L GF DT+R
Sbjct: 131 KQLADTKPVIFCGDLNVAHEEIDLKNDRTNHHNAGFTDEERQKF-TELLQSGFTDTYRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R N GWR+DYF+ SQ+L + D+ I ++ GSDH PI L L
Sbjct: 190 YPDKEGVYSWWSYRFNARANNAGWRIDYFVTSQALDKQLADAKIHTEIFGSDHCPIELDL 249
Query: 181 KL 182
L
Sbjct: 250 NL 251
>gi|346314587|ref|ZP_08856106.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 2_2_44A]
gi|373124043|ref|ZP_09537885.1| exodeoxyribonuclease III (xth) [Erysipelotrichaceae bacterium 21_3]
gi|422327142|ref|ZP_16408169.1| exodeoxyribonuclease III (xth) [Erysipelotrichaceae bacterium
6_1_45]
gi|345906322|gb|EGX76051.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 2_2_44A]
gi|371659875|gb|EHO25135.1| exodeoxyribonuclease III (xth) [Erysipelotrichaceae bacterium 21_3]
gi|371663836|gb|EHO29020.1| exodeoxyribonuclease III (xth) [Erysipelotrichaceae bacterium
6_1_45]
Length = 254
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 121/180 (67%), Gaps = 7/180 (3%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSVTYGLGI +HD EGR++T E++ F+L+ Y PNS DGL RL YR+ W+ + +Y+
Sbjct: 72 KPLSVTYGLGIEEHDHEGRVITCEYEDFYLVCVYTPNSKDGLLRLDYRMV-WEDAFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFR-- 119
+L + K V++ GDLN AH+EID+ NP NRR+AGFTDEER L GF+D+FR
Sbjct: 131 HKLNETKSVLVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKMSV-LLESGFIDSFRYL 189
Query: 120 -AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G+ Y++W YR R+ N GWR+DYFLVS+ + ++ I D+ GSDH P+ L
Sbjct: 190 YPEQEGI--YSWWSYRFKAREKNAGWRIDYFLVSEDAKEAIREARIHTDIYGSDHCPVSL 247
>gi|350268411|ref|YP_004879717.1| exodeoxyribonuclease [Oscillibacter valericigenes Sjm18-20]
gi|348593251|dbj|BAK97211.1| exodeoxyribonuclease [Oscillibacter valericigenes Sjm18-20]
Length = 250
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 121/182 (66%), Gaps = 2/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+ PL++TY G ++ EGR++TAEF+ F+L+ CY PN+ D LRR+ YR+ W+ Y
Sbjct: 71 VPPLNMTYDFGGDEYRHEGRVITAEFEEFYLVCCYTPNAQDELRRIDYRM-RWEDDFRDY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++EL++ KPV+L GDLN AH+EID+ NP NR AGF+D+ER LS GF DTFR
Sbjct: 130 LRELDRVKPVVLCGDLNVAHEEIDLKNPKTNRGHAGFSDQERGKM-TELLSTGFSDTFRT 188
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR R+ N GWR+DYF+VS+ +K DS I V GSDH P+GL L
Sbjct: 189 LYPEKIAYSWWSYRFRAREKNAGWRIDYFIVSRRFQEKVVDSLICDQVFGSDHCPVGLEL 248
Query: 181 KL 182
+L
Sbjct: 249 EL 250
>gi|281417190|ref|ZP_06248210.1| exodeoxyribonuclease III Xth [Clostridium thermocellum JW20]
gi|281408592|gb|EFB38850.1| exodeoxyribonuclease III Xth [Clostridium thermocellum JW20]
Length = 251
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 121/182 (66%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPL V G+GI +HD EGR++T EFD+++L++ Y PN+ L RL YR+ +W+ +Y
Sbjct: 72 IKPLYVQNGIGIDEHDREGRVITLEFDNYYLVNVYTPNAKKELERLDYRM-KWEDDFRNY 130
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ L+ KKPVI+ GD+N AH+EID+ NP NRRSAGFTDEER F L+ GF+DTFR
Sbjct: 131 LVGLKAKKPVIVCGDMNVAHKEIDLKNPESNRRSAGFTDEERAKF-TELLNAGFIDTFRF 189
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G YT+W Y R N GWR+DYF VS+ L D+ + I DV GSDH P+ L
Sbjct: 190 FYPDKTGAYTWWSYMFNARARNAGWRIDYFCVSEELKDRLVSASIHDDVMGSDHCPVELQ 249
Query: 180 LK 181
+K
Sbjct: 250 IK 251
>gi|327402657|ref|YP_004343495.1| exodeoxyribonuclease III Xth [Fluviicola taffensis DSM 16823]
gi|327318165|gb|AEA42657.1| exodeoxyribonuclease III Xth [Fluviicola taffensis DSM 16823]
Length = 254
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/183 (49%), Positives = 121/183 (66%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++PLSV Y +G+S HD EGR++ AE+D F+L++ YVPNSG L RL YR T WD SY
Sbjct: 74 VEPLSVVYDMGVSHHDEEGRVICAEYDKFYLITVYVPNSGSELLRLPYRKT-WDADFLSY 132
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGN-RRSAGFTDEERQSFGANFLSKGFVDTFR 119
+K LE KKPV++ GD N AH+ ID+ P N +SAGF EE A F + G VD++R
Sbjct: 133 LKNLEAKKPVVVCGDFNVAHKAIDLARPKANYNKSAGFMQEEIDGMDA-FTANGLVDSWR 191
Query: 120 AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
A++ V YT+W YR G R+ N GWR+DYFLVS+ K ++ I ++ GSDH P+G+
Sbjct: 192 AKNGDEVKYTWWSYRGGAREKNVGWRIDYFLVSEGFVPKIKEATIHNEIFGSDHCPVGVE 251
Query: 180 LKL 182
L L
Sbjct: 252 LSL 254
>gi|468371|gb|AAA21019.1| apurinic/apyrimidinic endonuclease [Rattus norvegicus]
Length = 316
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 116/181 (64%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEF+SF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 137 PLKVSYGIGEEEHDQEGRVIVAEFESFILVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 195
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
+L +KP++L GDLN AH+EID+ NP GN+++AGFT +E Q FG + D+FR +
Sbjct: 196 DLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQEAQGFGEMLQAVPLADSFRHLY 255
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+SQSL DS I GSDH PI L L
Sbjct: 256 PNTAYAYTFWTYMMNARSKNVGWRLDYFLLSQSLLPALCDSKIRSKALGSDHCPITLYLA 315
Query: 182 L 182
L
Sbjct: 316 L 316
>gi|313897464|ref|ZP_07831007.1| exodeoxyribonuclease III [Clostridium sp. HGF2]
gi|312957834|gb|EFR39459.1| exodeoxyribonuclease III [Clostridium sp. HGF2]
Length = 254
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 120/178 (67%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSVTYGLGI +HD EGR++T E++ F+L+ Y PNS DGL RL YR+ W+ + +Y+
Sbjct: 72 KPLSVTYGLGIEEHDHEGRVITCEYEDFYLVCVYTPNSKDGLLRLDYRMV-WEDAFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L + K V++ GDLN AH+EID+ NP NRR+AGFTDEER L GF+D+FR
Sbjct: 131 HKLNETKSVLVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKMSV-LLESGFIDSFRYL 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G Y++W YR R+ N GWR+DYFLVS+ + ++ I D+ GSDH P+ L
Sbjct: 190 YPKQEGIYSWWSYRFKAREKNAGWRIDYFLVSEDAKEAIREARIHTDIYGSDHCPVSL 247
>gi|257897862|ref|ZP_05677515.1| AP endonuclease [Enterococcus faecium Com15]
gi|257835774|gb|EEV60848.1| AP endonuclease [Enterococcus faecium Com15]
Length = 250
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 123/179 (68%), Gaps = 3/179 (1%)
Query: 4 LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKE 63
L+ TYG+GI HD+EGRL+T E+ FFL++CY PNS L+RL YR+ EW+ + +Y++
Sbjct: 74 LNATYGMGIDIHDTEGRLITLEYSDFFLVTCYTPNSQSELKRLDYRL-EWEEAFYNYLEN 132
Query: 64 LEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHR 123
L+K+KPVI+ GDLN AHQ ID+ N N+++AGFT EER + + L GF+DTFR +
Sbjct: 133 LKKQKPVIVCGDLNVAHQTIDLKNWKTNQKNAGFTPEERAAL-SRLLDNGFIDTFRYFYP 191
Query: 124 GVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
G Y++W YR RK N GWR+DYFL S+ LA + D+ I D+ GSDH P+ L LK
Sbjct: 192 TQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLAPRLADAKIHTDIMGSDHCPVELDLK 250
>gi|257886665|ref|ZP_05666318.1| AP endonuclease [Enterococcus faecium 1,141,733]
gi|257895240|ref|ZP_05674893.1| AP endonuclease [Enterococcus faecium Com12]
gi|293377228|ref|ZP_06623433.1| exodeoxyribonuclease III [Enterococcus faecium PC4.1]
gi|431752459|ref|ZP_19541142.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E2620]
gi|431757305|ref|ZP_19545936.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E3083]
gi|431762576|ref|ZP_19551136.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E3548]
gi|257822719|gb|EEV49651.1| AP endonuclease [Enterococcus faecium 1,141,733]
gi|257831805|gb|EEV58226.1| AP endonuclease [Enterococcus faecium Com12]
gi|292644089|gb|EFF62194.1| exodeoxyribonuclease III [Enterococcus faecium PC4.1]
gi|430613950|gb|ELB50949.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E2620]
gi|430619594|gb|ELB56421.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E3083]
gi|430623625|gb|ELB60304.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E3548]
Length = 250
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 123/179 (68%), Gaps = 3/179 (1%)
Query: 4 LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKE 63
L+ TYG+GI HD+EGRL+T E+ FFL++CY PNS L+RL YR+ EW+ + +Y++
Sbjct: 74 LNATYGMGIDIHDTEGRLITLEYSDFFLVTCYTPNSQSELKRLDYRL-EWEEAFYNYLEN 132
Query: 64 LEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHR 123
L+K+KPVI+ GDLN AHQ ID+ N N+++AGFT EER + + L GF+DTFR +
Sbjct: 133 LKKQKPVIVCGDLNVAHQTIDLKNWKTNQKNAGFTPEERAAL-SRLLDNGFIDTFRYFYP 191
Query: 124 GVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
G Y++W YR RK N GWR+DYFL S+ LA + D+ I D+ GSDH P+ L LK
Sbjct: 192 TQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLAPRLADAKIHTDIMGSDHCPVELDLK 250
>gi|257076437|ref|ZP_05570798.1| exodeoxyribonuclease III [Ferroplasma acidarmanus fer1]
Length = 252
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 124/180 (68%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLS T G G ++ D EGR+ T E+D+F+L++ Y PNS GL RL Y+I +++ + Y+
Sbjct: 74 EPLSYTTGTGENNKDVEGRIQTLEYDNFYLINSYFPNSQHGLTRLDYKI-QFNREILEYM 132
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+ KKPVI+TGD N AH+EIDI P GN ++AGFT EER S LS G+VDT+R
Sbjct: 133 DKLKAKKPVIITGDFNVAHEEIDIARPKGNEKNAGFTIEERDSM-TEILSHGYVDTYRYF 191
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
H+ Y++W YR R+ N GWR+DYFLVS + K DS IL +VTGSDH+P+ LILK
Sbjct: 192 HKEPGHYSWWSYRFNAREKNIGWRIDYFLVSDNFIGKVEDSLILENVTGSDHAPLELILK 251
>gi|307566413|ref|ZP_07628850.1| exodeoxyribonuclease III [Prevotella amnii CRIS 21A-A]
gi|307344885|gb|EFN90285.1| exodeoxyribonuclease III [Prevotella amnii CRIS 21A-A]
Length = 249
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 120/179 (67%), Gaps = 2/179 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PLSV+ G+GI +HD EGR++T E F+L++ Y PNS D L+RL YR+ +W+ SY+
Sbjct: 73 PLSVSRGIGIEEHDHEGRVITLEMADFYLVTVYTPNSQDQLKRLPYRM-QWETDFQSYLH 131
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L+K KPVI+ GD+N AH+EID+ NP N +AGF+DEER+ LS GF DTFR +
Sbjct: 132 SLDKHKPVIVCGDMNVAHEEIDLKNPKSNHFNAGFSDEEREKM-TTLLSNGFTDTFRFLY 190
Query: 123 RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
V Y++W YR R+ N GWR+DYFL+S L + ++ I ++ GSDH P+ +ILK
Sbjct: 191 PEQVTYSWWSYRFKAREKNIGWRIDYFLISDRLRESLEEAKIHTEILGSDHCPVEIILK 249
>gi|160879133|ref|YP_001558101.1| exodeoxyribonuclease III [Clostridium phytofermentans ISDg]
gi|160427799|gb|ABX41362.1| exodeoxyribonuclease III [Clostridium phytofermentans ISDg]
Length = 250
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 122/181 (67%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL VTYG+GI +HD EGR++T EF+ F++++ Y PNS + L RLSYR+ EW+ ++
Sbjct: 72 EPLQVTYGMGIEEHDKEGRVITLEFEDFYMVTVYTPNSQNELARLSYRM-EWEDEFRRFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE+ KPV++ GDLN AH+EID+ NP N+ +AGFT EER F + L GF+DTFR
Sbjct: 131 KKLEETKPVVVCGDLNVAHKEIDLKNPNTNQMNAGFTIEERTKF-SELLEAGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + Y++W YR R+ N GWR+DYFL SQ L K + I + GSDH PI L +
Sbjct: 190 YPDAMDMYSWWSYRFKAREKNTGWRIDYFLASQGLESKLVSAKIHSQILGSDHCPIELEI 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|358068175|ref|ZP_09154645.1| exodeoxyribonuclease [Johnsonella ignava ATCC 51276]
gi|356693719|gb|EHI55390.1| exodeoxyribonuclease [Johnsonella ignava ATCC 51276]
Length = 252
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP+ VTYG+GI +HD+EGR++TAEF+++++L+CY PNS L RL YR+ +W+ + Y+
Sbjct: 73 KPVKVTYGMGIEEHDNEGRIITAEFENYYMLTCYTPNSQRQLTRLEYRM-DWEDAFLDYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L +KKP+I GDLN A +ID+ NP NR++AGFTDEERQ A + GF D+FR
Sbjct: 132 KNLSQKKPLIYCGDLNVAFADIDLKNPKTNRKNAGFTDEERQKM-AVVQASGFTDSFRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W Y G R N GWR+DYF+VS SL + + I D+ GSDH P+ L +
Sbjct: 191 YPDLEGVYSWWSYMGGARSKNIGWRIDYFMVSDSLKNCIKQARIHTDIMGSDHCPVELEI 250
Query: 181 KL 182
+
Sbjct: 251 DI 252
>gi|332263793|ref|XP_003280936.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Nomascus
leucogenys]
gi|332263795|ref|XP_003280937.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Nomascus
leucogenys]
gi|332263797|ref|XP_003280938.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Nomascus
leucogenys]
gi|332263799|ref|XP_003280939.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Nomascus
leucogenys]
gi|441667374|ref|XP_004091971.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Nomascus
leucogenys]
Length = 318
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 116/181 (64%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD +L ++K
Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QRWDEALRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 258 PNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|225376286|ref|ZP_03753507.1| hypothetical protein ROSEINA2194_01924 [Roseburia inulinivorans DSM
16841]
gi|225211932|gb|EEG94286.1| hypothetical protein ROSEINA2194_01924 [Roseburia inulinivorans DSM
16841]
Length = 255
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 125/179 (69%), Gaps = 3/179 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+GI +HD EGR++T E+D+F+L++CY PNS + L RL YR+ +W+ +++
Sbjct: 76 EPLSVSYGIGIPEHDHEGRVITLEYDAFYLVTCYTPNSQNELARLPYRM-QWEEDFLAFL 134
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++ KPVI+ GDLN AH+EID+ NP NR++AGF+DEER L+ GF DTFR
Sbjct: 135 KRLDEVKPVIVCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKM-TTLLNSGFTDTFRYF 193
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G Y++W YR R+ N GWR+DYF+ S+ L +K + I +V GSDH P+ LI
Sbjct: 194 YPDKEGIYSWWSYRFKAREKNAGWRIDYFITSRCLDEKLQSAGIHTEVYGSDHCPVELI 252
>gi|366086404|ref|ZP_09452889.1| exodeoxyribonuclease III [Lactobacillus zeae KCTC 3804]
Length = 252
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 116/180 (64%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYG+GI +HD EGR++T E+ F+L++ Y PNSG L+RL YR +WD +Y
Sbjct: 72 EPLNVTYGMGIPEHDKEGRIITLEYPKFYLMTVYTPNSGGELKRLDYR-QQWDKDFRAYT 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L +KKP++ GDLN AH+ ID+ N N +AGFTDEER F L GF+DTFR
Sbjct: 131 NQLAEKKPLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERADFTKQ-LKSGFIDTFRHL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R N GWR+DYF+ S + D+ IL DV GSDH P+ LI +
Sbjct: 190 YPNTVTYSWWSYRFHARANNAGWRIDYFVASSNFQPYVKDAKILTDVMGSDHCPVELITQ 249
>gi|421893824|ref|ZP_16324317.1| exodeoxyribonuclease III [Pediococcus pentosaceus IE-3]
gi|385273309|emb|CCG89689.1| exodeoxyribonuclease III [Pediococcus pentosaceus IE-3]
Length = 251
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 119/182 (65%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+V YGLGI HD EGR++T EF+ F++++CY PNS L+RL YR+ WD + +Y+
Sbjct: 72 KPLTVRYGLGIEKHDQEGRVITLEFEKFYVITCYTPNSQPKLKRLEYRMA-WDDAFRAYI 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L + KPVI GDLN AHQEID+ N N ++AGFTDEER F L+ GF DT+R
Sbjct: 131 DQLNQHKPVIFCGDLNVAHQEIDLKNDKTNHKNAGFTDEERNKF-TQLLNSGFTDTYRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R N GWR+DYF+ S+ L K D+ I ++ GSDH P+ L L
Sbjct: 190 YPSKEGVYSWWSYRFNARANNAGWRIDYFVSSKVLDQKLTDAQIHTEIFGSDHCPVELDL 249
Query: 181 KL 182
+
Sbjct: 250 DI 251
>gi|432112926|gb|ELK35512.1| DNA-(apurinic or apyrimidinic site) lyase [Myotis davidii]
Length = 320
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 116/181 (64%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AE+D+F L++ YVPN+G GL RL YR WD + ++K
Sbjct: 141 PLKVSYGIGEEEHDQEGRVIVAEYDAFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 199
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
+L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 200 DLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 259
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFLVS SL DS I GSDH PI L L
Sbjct: 260 PNTAYAYTFWTYMMNARSKNVGWRLDYFLVSHSLLPALCDSKIRSKALGSDHCPITLYLA 319
Query: 182 L 182
L
Sbjct: 320 L 320
>gi|430834375|ref|ZP_19452382.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E0679]
gi|430485606|gb|ELA62512.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E0679]
Length = 250
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 125/182 (68%), Gaps = 4/182 (2%)
Query: 2 KP-LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
KP L+ TYGLGI HD+EGRL+T E+ FFL++CY PNS L+RL YR+ EW+ + +Y
Sbjct: 71 KPALNATYGLGIDIHDTEGRLITLEYSDFFLVTCYTPNSQSELKRLDYRL-EWEEAFYNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++ L+K+KPVI+ GDLN AHQ+ID+ N N+++AGFT EER + + L GF+DTFR
Sbjct: 130 LENLKKQKPVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAAL-SRLLDNGFIDTFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G Y++W YR RK N GWR+DYFL S+ L + D+ I D+ GSDH P+ L
Sbjct: 189 FYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLEPRLADAKIHTDIMGSDHCPVELD 248
Query: 180 LK 181
LK
Sbjct: 249 LK 250
>gi|431077776|ref|ZP_19495241.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1604]
gi|431112344|ref|ZP_19497720.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1613]
gi|430566191|gb|ELB05312.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1604]
gi|430569298|gb|ELB08315.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1613]
Length = 250
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 125/182 (68%), Gaps = 4/182 (2%)
Query: 2 KP-LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
KP L+ TYG+GI HD+EGRL+T E+ FFL++CY PNS L+RL YR+ EW+ + +Y
Sbjct: 71 KPALNATYGMGIDIHDTEGRLITLEYSDFFLVTCYTPNSQSELKRLDYRL-EWEEAFYNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++ L+K+KPVI+ GDLN AHQ+ID+ N N+++AGFT EER + + L GF+DTFR
Sbjct: 130 LENLKKQKPVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAAL-SRLLDNGFIDTFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G Y++W YR RK N GWR+DYFL S+ L + D+ I D+ GSDH P+ L
Sbjct: 189 FYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLETRLADAKIHTDIMGSDHCPVELD 248
Query: 180 LK 181
LK
Sbjct: 249 LK 250
>gi|430841915|ref|ZP_19459832.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1007]
gi|431741213|ref|ZP_19530119.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E2039]
gi|430493733|gb|ELA70024.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1007]
gi|430601870|gb|ELB39452.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E2039]
Length = 250
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 125/182 (68%), Gaps = 4/182 (2%)
Query: 2 KP-LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
KP L+ TYG+GI HD+EGRL+T E+ FFL++CY PNS L+RL YR+ EW+ + +Y
Sbjct: 71 KPALNATYGMGIDIHDTEGRLITLEYSDFFLVTCYTPNSQSELKRLDYRL-EWEEAFYNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++ L+K+KPVI+ GDLN AHQ+ID+ N N+++AGFT EER + + L GF+DTFR
Sbjct: 130 LENLKKQKPVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAAL-SRLLDNGFIDTFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G Y++W YR RK N GWR+DYFL S+ L + D+ I D+ GSDH P+ L
Sbjct: 189 FYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLETRLADAKIHTDIMGSDHCPVELD 248
Query: 180 LK 181
LK
Sbjct: 249 LK 250
>gi|328702292|ref|XP_001952290.2| PREDICTED: recombination repair protein 1-like [Acyrthosiphon
pisum]
Length = 317
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 118/177 (66%), Gaps = 4/177 (2%)
Query: 2 KPLSVTYGLGISD-HDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
KP+SV G I D D+EGR++ AE++ FFL+S Y+PN+G GL+ L R+ +WD + Y
Sbjct: 137 KPISVRMGKEIKDLDDNEGRVIEAEYEQFFLVSTYIPNAGAGLKTLPKRM-KWDEAFRKY 195
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+KEL+ KKPV+LTGDLN AH+EIDI NP N +SAGFT EER + L +GFVDTFR
Sbjct: 196 LKELDTKKPVVLTGDLNVAHEEIDIANPKTNTKSAGFTKEERDNMSL-LLEQGFVDTFRT 254
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPI 176
+ G YT+W Y H R N GWRLDYF+ S+ D DS I +V GSDH PI
Sbjct: 255 LNPEKTGAYTFWTYFHNSRAKNVGWRLDYFITSKRFMDNVCDSTIRNEVLGSDHCPI 311
>gi|425057149|ref|ZP_18460578.1| exodeoxyribonuclease III [Enterococcus faecium 504]
gi|403041007|gb|EJY52049.1| exodeoxyribonuclease III [Enterococcus faecium 504]
Length = 269
Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 125/182 (68%), Gaps = 4/182 (2%)
Query: 2 KP-LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
KP L+ TYG+GI HD+EGRL+T E+ FFL++CY PNS L+RL YR+ EW+ + +Y
Sbjct: 90 KPALNATYGMGIDIHDTEGRLITLEYSDFFLVTCYTPNSQSELKRLDYRL-EWEEAFYNY 148
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++ L+K+KPVI+ GDLN AHQ+ID+ N N+++AGFT EER + + L GF+DTFR
Sbjct: 149 LENLKKQKPVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAAL-SRLLDNGFIDTFRY 207
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G Y++W YR RK N GWR+DYFL S+ L + D+ I D+ GSDH P+ L
Sbjct: 208 FYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLEPRLADAKIHTDIMGSDHCPVELD 267
Query: 180 LK 181
LK
Sbjct: 268 LK 269
>gi|325285209|ref|YP_004260999.1| exodeoxyribonuclease III Xth [Cellulophaga lytica DSM 7489]
gi|324320663|gb|ADY28128.1| exodeoxyribonuclease III Xth [Cellulophaga lytica DSM 7489]
Length = 254
Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 117/178 (65%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL++ +GI HD+EGR++ E+++F+L++ YVPNSG L RL YR +WD Y+
Sbjct: 75 KPLTIKADIGIEAHDTEGRVLCTEYENFYLVNVYVPNSGQKLDRLEYR-KQWDKDFLDYL 133
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGN-RRSAGFTDEERQSFGANFLSKGFVDTFRA 120
K LEKKKPVI GD N AH+ ID+ N N ++AG+T E NF++ GFVD+FR
Sbjct: 134 KNLEKKKPVIACGDFNVAHKAIDLKNDKSNYNKTAGYTQTEIDGMN-NFIADGFVDSFRM 192
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
H V YT+W YR R+ N GWR+DYFLVSQS+ DK + + D+ GSDH PIGL
Sbjct: 193 LHPDEVVYTFWSYRFKSRERNTGWRIDYFLVSQSIKDKVKEVTVFSDIMGSDHCPIGL 250
>gi|163814023|ref|ZP_02205416.1| hypothetical protein COPEUT_00176 [Coprococcus eutactus ATCC 27759]
gi|158450717|gb|EDP27712.1| exodeoxyribonuclease III [Coprococcus eutactus ATCC 27759]
Length = 257
Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
K LS T G+GI +HD EGR++T E+++F++++ Y PNS + L RL YR+ +W+ +Y+
Sbjct: 78 KSLSETKGIGIDEHDHEGRVITLEYENFYMVTVYTPNSQNELARLDYRM-KWEDDFRAYL 136
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE+ KPVI+ GD+N AH EID+ NP NR++AGFTDEER+ L GF+DTFR
Sbjct: 137 KKLEENKPVIVCGDMNVAHNEIDLKNPKTNRKNAGFTDEEREKMTV-LLDDGFIDTFRYF 195
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W YR R+ N GWR+DYFL S+SL DK D+ I D+ GSDH P+ L +
Sbjct: 196 YPDQENIYSWWSYRFKAREKNAGWRIDYFLTSESLKDKLIDAKIHTDIMGSDHCPVELDI 255
Query: 181 KL 182
+
Sbjct: 256 DM 257
>gi|257883889|ref|ZP_05663542.1| AP endonuclease [Enterococcus faecium 1,231,501]
gi|430852149|ref|ZP_19469884.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1258]
gi|257819727|gb|EEV46875.1| AP endonuclease [Enterococcus faecium 1,231,501]
gi|430542731|gb|ELA82839.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1258]
Length = 250
Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 124/182 (68%), Gaps = 4/182 (2%)
Query: 2 KP-LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
KP L+ TYG+GI HD+EGRL+T E+ FFL++CY PNS L+RL YR+ EW+ + +Y
Sbjct: 71 KPALNATYGMGIDIHDTEGRLITLEYSDFFLVTCYTPNSQSELKRLDYRL-EWEEAFYNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++ L+K+KPVI+ GDLN AHQ ID+ N N+++AGFT EER + + L GFVDTFR
Sbjct: 130 LENLKKQKPVIICGDLNVAHQTIDLKNWKTNQKNAGFTPEERAAL-SRLLDNGFVDTFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G Y++W YR RK N GWR+DYFL S+ L + D+ I D+ GSDH P+ L
Sbjct: 189 FYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLASKDLEPRLADAKIHTDIMGSDHCPVELD 248
Query: 180 LK 181
LK
Sbjct: 249 LK 250
>gi|293557096|ref|ZP_06675652.1| exodeoxyribonuclease III [Enterococcus faecium E1039]
gi|293567361|ref|ZP_06678711.1| exodeoxyribonuclease III [Enterococcus faecium E1071]
gi|406581419|ref|ZP_11056574.1| exodeoxyribonuclease III [Enterococcus sp. GMD4E]
gi|406591645|ref|ZP_11065904.1| exodeoxyribonuclease III [Enterococcus sp. GMD1E]
gi|416134092|ref|ZP_11598208.1| exodeoxyribonuclease III [Enterococcus faecium E4452]
gi|430822986|ref|ZP_19441561.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E0120]
gi|430825958|ref|ZP_19444156.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E0164]
gi|430828054|ref|ZP_19446184.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E0269]
gi|430835361|ref|ZP_19453351.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E0680]
gi|430838568|ref|ZP_19456514.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E0688]
gi|430843577|ref|ZP_19461476.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1050]
gi|430857677|ref|ZP_19475310.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1552]
gi|430860673|ref|ZP_19478272.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1573]
gi|430865725|ref|ZP_19481300.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1574]
gi|430882969|ref|ZP_19484174.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1575]
gi|430946137|ref|ZP_19485613.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1576]
gi|431002064|ref|ZP_19488655.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1578]
gi|431149614|ref|ZP_19499472.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1620]
gi|431230291|ref|ZP_19502494.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1622]
gi|431250993|ref|ZP_19503927.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1623]
gi|431301513|ref|ZP_19507832.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1626]
gi|431375556|ref|ZP_19510351.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1627]
gi|431742657|ref|ZP_19531542.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E2071]
gi|431746687|ref|ZP_19535512.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E2134]
gi|431764630|ref|ZP_19553167.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E4215]
gi|431767687|ref|ZP_19556134.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1321]
gi|447912130|ref|YP_007393542.1| Exodeoxyribonuclease III [Enterococcus faecium NRRL B-2354]
gi|291589963|gb|EFF21761.1| exodeoxyribonuclease III [Enterococcus faecium E1071]
gi|291600740|gb|EFF31036.1| exodeoxyribonuclease III [Enterococcus faecium E1039]
gi|364092709|gb|EHM35053.1| exodeoxyribonuclease III [Enterococcus faecium E4452]
gi|404452675|gb|EJZ99832.1| exodeoxyribonuclease III [Enterococcus sp. GMD4E]
gi|404467425|gb|EKA12542.1| exodeoxyribonuclease III [Enterococcus sp. GMD1E]
gi|430442915|gb|ELA52936.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E0120]
gi|430445666|gb|ELA55396.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E0164]
gi|430484135|gb|ELA61170.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E0269]
gi|430489352|gb|ELA65966.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E0680]
gi|430491810|gb|ELA68262.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E0688]
gi|430497436|gb|ELA73473.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1050]
gi|430546887|gb|ELA86829.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1552]
gi|430552071|gb|ELA91821.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1573]
gi|430552790|gb|ELA92516.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1574]
gi|430556526|gb|ELA96024.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1575]
gi|430558609|gb|ELA98021.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1576]
gi|430562184|gb|ELB01435.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1578]
gi|430574277|gb|ELB13055.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1622]
gi|430575503|gb|ELB14219.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1620]
gi|430578900|gb|ELB17447.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1623]
gi|430580703|gb|ELB19170.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1626]
gi|430583020|gb|ELB21419.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1627]
gi|430607891|gb|ELB45187.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E2071]
gi|430608589|gb|ELB45835.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E2134]
gi|430630640|gb|ELB66995.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1321]
gi|430630770|gb|ELB67119.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E4215]
gi|445187839|gb|AGE29481.1| Exodeoxyribonuclease III [Enterococcus faecium NRRL B-2354]
Length = 250
Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 125/182 (68%), Gaps = 4/182 (2%)
Query: 2 KP-LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
KP L+ TYG+GI HD+EGRL+T E+ FFL++CY PNS L+RL YR+ EW+ + +Y
Sbjct: 71 KPALNATYGMGIDIHDTEGRLITLEYSDFFLVTCYTPNSQSELKRLDYRL-EWEEAFYNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++ L+K+KPVI+ GDLN AHQ+ID+ N N+++AGFT EER + + L GF+DTFR
Sbjct: 130 LENLKKQKPVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAAL-SRLLDNGFIDTFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G Y++W YR RK N GWR+DYFL S+ L + D+ I D+ GSDH P+ L
Sbjct: 189 FYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLEPRLADAKIHTDIMGSDHCPVELD 248
Query: 180 LK 181
LK
Sbjct: 249 LK 250
>gi|156362086|ref|XP_001625612.1| predicted protein [Nematostella vectensis]
gi|156212454|gb|EDO33512.1| predicted protein [Nematostella vectensis]
Length = 257
Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 121/182 (66%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+ V+YG+G +HD EGR++TAE++ F L++ YVPNSG GL RL YR +W+ SY+
Sbjct: 78 EPIKVSYGMGNKEHDKEGRVITAEYEDFHLVTSYVPNSGRGLPRLGYR-QQWNKDFLSYL 136
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+L++ KPVIL GDLN AH++ID+ NP N R+AGFT EER F L +GF DTFR
Sbjct: 137 KKLDEIKPVILCGDLNVAHKDIDLANPKTNTRTAGFTKEERADF-TTLLGEGFKDTFREL 195
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y G R N GWRLDYF+VS L K DS I V GSDH P+ L+L
Sbjct: 196 YPDKKSAYTFWSYMGGARAKNVGWRLDYFVVSDRLVPKVCDSIIRSRVMGSDHCPLSLLL 255
Query: 181 KL 182
+
Sbjct: 256 SI 257
>gi|6753086|ref|NP_033817.1| DNA-(apurinic or apyrimidinic site) lyase [Mus musculus]
gi|113985|sp|P28352.2|APEX1_MOUSE RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
Full=APEX nuclease; Short=APEN; AltName:
Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox
factor-1; Contains: RecName: Full=DNA-(apurinic or
apyrimidinic site) lyase, mitochondrial
gi|220337|dbj|BAA14382.1| APEX nuclease precursor [Mus musculus]
gi|533108|gb|AAC13769.1| apurinic/apyrimidinic endonuclease [Mus musculus]
gi|533329|dbj|BAA07270.1| APEX nuclease [Mus musculus]
gi|12850573|dbj|BAB28774.1| unnamed protein product [Mus musculus]
gi|30851442|gb|AAH52401.1| Apurinic/apyrimidinic endonuclease 1 [Mus musculus]
gi|148688888|gb|EDL20835.1| apurinic/apyrimidinic endonuclease 1 [Mus musculus]
Length = 317
Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 116/181 (64%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEF+SF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 138 PLKVSYGIGEEEHDQEGRVIVAEFESFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 196
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
+L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 197 DLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 256
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 257 PNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 316
Query: 182 L 182
L
Sbjct: 317 L 317
>gi|223278400|ref|NP_788782.2| DNA-(apurinic or apyrimidinic site) lyase [Bos taurus]
gi|113912167|gb|AAI22611.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Bos taurus]
gi|296483354|tpg|DAA25469.1| TPA: DNA-(apurinic or apyrimidinic site) lyase [Bos taurus]
gi|440900925|gb|ELR51950.1| DNA-(apurinic or apyrimidinic site) lyase [Bos grunniens mutus]
Length = 318
Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 116/181 (64%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AE+D+F L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEYDAFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLTDSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+SQSL DS I GSDH PI L L
Sbjct: 258 PNTAYAYTFWTYMMNARSKNVGWRLDYFLLSQSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|431514988|ref|ZP_19516181.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1634]
gi|430586004|gb|ELB24272.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1634]
Length = 250
Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 125/182 (68%), Gaps = 4/182 (2%)
Query: 2 KP-LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
KP L+ TYG+GI HD+EGRL+T E+ FFL++CY PNS L+RL YR+ EW+ + +Y
Sbjct: 71 KPALNTTYGMGIDIHDTEGRLITLEYSDFFLVTCYTPNSQSELKRLDYRL-EWEEAFYNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++ L+K+KPVI+ GDLN AHQ+ID+ N N+++AGFT EER + + L GF+DTFR
Sbjct: 130 LENLKKQKPVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAAL-SRLLDNGFIDTFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G Y++W YR RK N GWR+DYFL S+ L + D+ I D+ GSDH P+ L
Sbjct: 189 FYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLEPRLADAKIHTDIMGSDHCPVELD 248
Query: 180 LK 181
LK
Sbjct: 249 LK 250
>gi|363893051|ref|ZP_09320191.1| exodeoxyribonuclease III (xth) [Eubacteriaceae bacterium CM2]
gi|402837946|ref|ZP_10886461.1| exodeoxyribonuclease III [Eubacteriaceae bacterium OBRC8]
gi|361961782|gb|EHL14961.1| exodeoxyribonuclease III (xth) [Eubacteriaceae bacterium CM2]
gi|402274377|gb|EJU23561.1| exodeoxyribonuclease III [Eubacteriaceae bacterium OBRC8]
Length = 251
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP+ V YGLGI +HD EGRL+T E++++++ + Y PN+ L RL+YR +W+ Y
Sbjct: 72 KPIDVHYGLGIEEHDMEGRLITLEYENYYIATVYTPNAQPELARLAYR-QKWEEDFREYF 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+L++KKPVI+ GD+N AHQEID+ NP NR++ GF+DEER+ F L+ GF+DTFR
Sbjct: 131 KKLDEKKPVIICGDMNVAHQEIDLKNPKNNRKNPGFSDEEREKFTL-LLNAGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W YR RK N GWR+DYF VS L +K + I DV GSDH P+ + +
Sbjct: 190 YPDKTDEYSWWSYRFNARKNNAGWRIDYFCVSDRLKEKLKSASIHQDVMGSDHCPVSIEI 249
Query: 181 KL 182
+L
Sbjct: 250 EL 251
>gi|442804155|ref|YP_007372304.1| exodeoxyribonuclease III [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740005|gb|AGC67694.1| exodeoxyribonuclease III [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 251
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSV G+G+++HD+EGR++TAE+D F+L++ Y PNS GL RL YR+ +W+ Y+
Sbjct: 72 KPLSVVDGIGMNEHDNEGRVLTAEYDKFYLVTVYTPNSQRGLTRLDYRM-KWEDDFREYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L+ KPVI+ GDLN AH+EIDI NP NRR+AGFTDEER+ + GF D+FR
Sbjct: 131 KRLDTTKPVIICGDLNVAHREIDIKNPEANRRNAGFTDEEREKMTM-LIQSGFTDSFRYL 189
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R+ N GWR+DYFLVS + DK D+ + ++ GSDH P+ L +
Sbjct: 190 YPDKTDAYTWWSYMFNAREKNIGWRIDYFLVSDRIRDKIRDAGMYSEIYGSDHCPVFLEI 249
Query: 181 KL 182
+
Sbjct: 250 DI 251
>gi|301096360|ref|XP_002897277.1| exodeoxyribonuclease [Phytophthora infestans T30-4]
gi|262107161|gb|EEY65213.1| exodeoxyribonuclease [Phytophthora infestans T30-4]
Length = 362
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 91/167 (54%), Positives = 111/167 (66%), Gaps = 14/167 (8%)
Query: 2 KPLSVTYGLGISDHDS-------------EGRLVTAEFDSFFLLSCYVPNSGDGLRRLSY 48
KPLSV + + DHDS EGR + EF F+L+ YVPN+G L RL +
Sbjct: 189 KPLSVKDEIVVGDHDSKGVAKSANGGKDQEGRFLALEFPKFWLVHTYVPNAGGKLERLDF 248
Query: 49 RITEWDPSLSSYVKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGAN 108
R T+WD ++ +KE+EK KPVI GDLN AHQEIDI+NP GN +SAGFTDEER+SFG
Sbjct: 249 RTTQWDKAMHREMKEMEKTKPVIWCGDLNVAHQEIDIHNPKGNHKSAGFTDEERESFG-E 307
Query: 109 FLSKGFVDTFRAQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSL 155
L GFVDTFR H V Y+Y+GYRH R N+GWRLDYF+VS+ L
Sbjct: 308 ILEDGFVDTFRHLHPDTVEYSYFGYRHNMRAKNKGWRLDYFVVSEKL 354
>gi|385827641|ref|YP_005865413.1| exodeoxyribonuclease III [Lactobacillus rhamnosus GG]
gi|259649286|dbj|BAI41448.1| exodeoxyribonuclease III [Lactobacillus rhamnosus GG]
Length = 253
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 116/180 (64%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VTYG+GI +HD+EGR++T E+ F+L++ Y PNSG L+RL YR +WD +Y
Sbjct: 73 KPLNVTYGMGIPEHDTEGRIITLEYTKFYLMTVYTPNSGGELKRLDYR-QQWDRDFLAYT 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL KKP++ GDLN AH+ ID+ N N +AGFTDEER F L+ GF+DTFR
Sbjct: 132 NELAAKKPLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERADFTKQ-LNSGFIDTFRHF 190
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R N GWR+DYF+ S + D+ IL + GSDH P+ L+ +
Sbjct: 191 YPDTVTYSWWSYRFHARANNAGWRIDYFVASSAFQPYIQDAKILTQIMGSDHCPVELVTQ 250
>gi|423078997|ref|ZP_17067672.1| exodeoxyribonuclease III [Lactobacillus rhamnosus ATCC 21052]
gi|357548454|gb|EHJ30318.1| exodeoxyribonuclease III [Lactobacillus rhamnosus ATCC 21052]
Length = 253
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 116/180 (64%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VTYG+GI +HD+EGR++T E+ F+L++ Y PNSG L+RL YR +WD +Y
Sbjct: 73 KPLNVTYGMGIPEHDTEGRIITLEYPKFYLMTVYTPNSGGELKRLDYR-QQWDRDFLAYT 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL KKP++ GDLN AH+ ID+ N N +AGFTDEER F L+ GF+DTFR
Sbjct: 132 NELAAKKPLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERADFTKQ-LNSGFIDTFRHF 190
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R N GWR+DYF+ S + D+ IL + GSDH P+ L+ +
Sbjct: 191 YPDTVTYSWWSYRFHARANNAGWRIDYFVASSAFQSYIQDAKILTQIMGSDHCPVELVTQ 250
>gi|169334284|ref|ZP_02861477.1| hypothetical protein ANASTE_00682 [Anaerofustis stercorihominis DSM
17244]
gi|169259001|gb|EDS72967.1| exodeoxyribonuclease III [Anaerofustis stercorihominis DSM 17244]
Length = 251
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 89/183 (48%), Positives = 124/183 (67%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP+SV GL EGR++TAE+++F+L++ Y PNS + L+RL YR+ EW+ + Y
Sbjct: 71 IKPISVKTGLEEEKFSKEGRVITAEYENFYLVNVYTPNSQNELKRLDYRM-EWEDYFADY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ EL+K KPVI+ GDLN AH+EID+ NP N+++AGFT EER + L +GFVD++R
Sbjct: 130 LCELDKVKPVIMCGDLNVAHREIDLKNPKTNKKNAGFTIEERDKM-TSLLKRGFVDSYRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ + G YT+W YR RK N GWR+DYF+VS + DK D I DV GSDH P+ L
Sbjct: 189 LYPDIEGVYTWWSYRFNARKNNAGWRIDYFIVSDRIKDKIKDVKIFSDVMGSDHCPVLLD 248
Query: 180 LKL 182
++L
Sbjct: 249 IEL 251
>gi|258645453|ref|ZP_05732922.1| exodeoxyribonuclease III [Dialister invisus DSM 15470]
gi|260402804|gb|EEW96351.1| exodeoxyribonuclease III [Dialister invisus DSM 15470]
Length = 254
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 90/183 (49%), Positives = 122/183 (66%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPLSVTYG+G+ +HD EGR++TA+F+ L++CY PNS GL RL+YR+ +W+ Y
Sbjct: 74 IKPLSVTYGIGMEEHDQEGRVITADFNDHCLVTCYTPNSQRGLARLTYRM-KWEDDFKKY 132
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ +L KKKPVIL GDLN AH+EID+ NPA N +AGFTD+ER LS GF D+FR
Sbjct: 133 LLDLSKKKPVILCGDLNVAHEEIDLANPASNHMNAGFTDDERNKM-TELLSDGFTDSFRY 191
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
H+ Y++W Y R+ N GWR+DYFLVS L + + I + GSDH P+ L
Sbjct: 192 LHQDKKDAYSWWSYFAKSRERNIGWRIDYFLVSDILQPRIKAAEIHSSILGSDHCPVELD 251
Query: 180 LKL 182
+++
Sbjct: 252 IEI 254
>gi|47087383|ref|NP_998586.1| DNA-(apurinic or apyrimidinic site) lyase [Danio rerio]
gi|33416367|gb|AAH55545.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Danio rerio]
Length = 310
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 118/182 (64%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYG+G +HD EGR++TAEF FFL++ YVPN+ GL RL YR T WD +Y+
Sbjct: 131 EPLNVTYGIGKEEHDKEGRVITAEFPDFFLVTAYVPNASRGLVRLDYRKT-WDVDFRAYL 189
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L+ +KP++L GDLN AHQEID+ NP GNR++AGFT EER+ F L GF D+FR
Sbjct: 190 CGLDARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPEEREGF-TQLLEAGFTDSFREL 248
Query: 122 HRG-VVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWRLDYF++S +L DS I GSDH PI L L
Sbjct: 249 YPDQAYAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLCDSKIRNTAMGSDHCPITLFL 308
Query: 181 KL 182
+
Sbjct: 309 AV 310
>gi|410961722|ref|XP_003987428.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase isoform 1
[Felis catus]
gi|410961726|ref|XP_003987430.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase isoform 3
[Felis catus]
gi|410961728|ref|XP_003987431.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase isoform 4
[Felis catus]
gi|410961730|ref|XP_003987432.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase isoform 5
[Felis catus]
Length = 318
Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLEAVPLADSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 258 PNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|431416509|ref|ZP_19512398.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1630]
gi|431759796|ref|ZP_19548405.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E3346]
gi|430588982|gb|ELB27145.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1630]
gi|430625637|gb|ELB62257.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E3346]
Length = 250
Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 125/182 (68%), Gaps = 4/182 (2%)
Query: 2 KP-LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
KP L+ TYG+GI HD+EGRL+T E+ FFL++CY PNS L+RL YR+ EW+ + +Y
Sbjct: 71 KPALNATYGMGIDIHDTEGRLITLEYSDFFLVTCYTPNSQSELKRLDYRL-EWEEAFYNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++ L+K+KPVI+ GDLN AHQ+ID+ N N+++AGFT EER + + L GF+DTFR
Sbjct: 130 LENLKKQKPVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAAL-SRLLDNGFIDTFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G Y++W YR RK N GWR+DYFL S+ L + D+ I D+ GSDH P+ L
Sbjct: 189 FYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLEPRLADAKIHTDIMGSDHCPVELD 248
Query: 180 LK 181
LK
Sbjct: 249 LK 250
>gi|403289383|ref|XP_003935839.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Saimiri
boliviensis boliviensis]
gi|403289385|ref|XP_003935840.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Saimiri
boliviensis boliviensis]
Length = 318
Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 258 PNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|296214367|ref|XP_002753758.1| PREDICTED: uncharacterized protein LOC100400557 isoform 1
[Callithrix jacchus]
gi|296214369|ref|XP_002753759.1| PREDICTED: uncharacterized protein LOC100400557 isoform 2
[Callithrix jacchus]
Length = 318
Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 258 PNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|426232864|ref|XP_004010439.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Ovis aries]
Length = 318
Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 116/181 (64%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AE+D+F L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEYDAFVLVTAYVPNAGRGLVRLEYRQC-WDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAAPLTDSFRHLY 257
Query: 123 RG-VVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+SQSL DS I GSDH PI L L
Sbjct: 258 PNRAYAYTFWTYMMNARSKNVGWRLDYFLLSQSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|410961724|ref|XP_003987429.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase isoform 2
[Felis catus]
Length = 404
Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 225 PLKVSYGIGEEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 283
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 284 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLEAVPLADSFRHLY 343
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 344 PNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 403
Query: 182 L 182
L
Sbjct: 404 L 404
>gi|418070253|ref|ZP_12707528.1| exodeoxyribonuclease III [Lactobacillus rhamnosus R0011]
gi|357539673|gb|EHJ23690.1| exodeoxyribonuclease III [Lactobacillus rhamnosus R0011]
Length = 252
Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 116/180 (64%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VTYG+GI +HD+EGR++T E+ F+L++ Y PNSG L+RL YR +WD +Y
Sbjct: 72 KPLNVTYGMGIPEHDTEGRIITLEYPKFYLMTVYTPNSGGELKRLDYR-QQWDRDFLAYT 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL KKP++ GDLN AH+ ID+ N N +AGFTDEER F L+ GF+DTFR
Sbjct: 131 NELAAKKPLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERADFTKQ-LNSGFIDTFRHF 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R N GWR+DYF+ S + D+ IL + GSDH P+ L+ +
Sbjct: 190 YPDTVTYSWWSYRFHARANNAGWRIDYFVASSAFQSYIQDAKILTQIMGSDHCPVELVTQ 249
>gi|162329921|pdb|2O3C|A Chain A, Crystal Structure Of Zebrafish Ape
gi|162329922|pdb|2O3C|B Chain B, Crystal Structure Of Zebrafish Ape
gi|162329923|pdb|2O3C|C Chain C, Crystal Structure Of Zebrafish Ape
Length = 282
Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 118/182 (64%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYG+G +HD EGR++TAEF FFL++ YVPN+ GL RL YR T WD +Y+
Sbjct: 103 EPLNVTYGIGKEEHDKEGRVITAEFPDFFLVTAYVPNASRGLVRLDYRKT-WDVDFRAYL 161
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L+ +KP++L GDLN AHQEID+ NP GNR++AGFT EER+ F L GF D+FR
Sbjct: 162 CGLDARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPEEREGF-TQLLEAGFTDSFREL 220
Query: 122 HRG-VVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWRLDYF++S +L DS I GSDH PI L L
Sbjct: 221 YPDQAYAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLCDSKIRNTAMGSDHCPITLFL 280
Query: 181 KL 182
+
Sbjct: 281 AV 282
>gi|157127237|ref|XP_001654881.1| ap endonuclease [Aedes aegypti]
gi|108872984|gb|EAT37209.1| AAEL010781-PA [Aedes aegypti]
Length = 612
Score = 185 bits (469), Expect = 8e-45, Method: Composition-based stats.
Identities = 91/181 (50%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
P +VTYGLG + D++GRL+TAE++ FFL+ YVPN+G GL L R+ WD Y+K
Sbjct: 434 PFNVTYGLGDEEQDADGRLLTAEYEKFFLVCVYVPNAGRGLVTLPKRM-RWDEKFHKYLK 492
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
+L+ KKPVIL GD+N AH+EID+ NP N+++AGFT EER+ LS GFVDTFR +
Sbjct: 493 DLDAKKPVILCGDMNVAHEEIDLANPKTNKKNAGFTPEEREGM-TKLLSLGFVDTFRQLY 551
Query: 123 RGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
G YT+W Y R N GWRLDYF+ S+ K D+ I V GSDH P+ L LK
Sbjct: 552 PEQSGAYTFWTYMGNARAKNVGWRLDYFITSERFVGKVVDNVIRSGVYGSDHCPLTLFLK 611
Query: 182 L 182
+
Sbjct: 612 V 612
>gi|284047996|ref|YP_003398335.1| exodeoxyribonuclease III [Acidaminococcus fermentans DSM 20731]
gi|283952217|gb|ADB47020.1| exodeoxyribonuclease III [Acidaminococcus fermentans DSM 20731]
Length = 250
Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 119/181 (65%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTYGLG +HD EGR++TAE+ F+L++ Y PNS GL RL YR+ +W+ Y
Sbjct: 72 EPLSVTYGLGQEEHDQEGRVITAEYPDFYLVNVYTPNSQRGLTRLEYRM-QWEDVFQDYC 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L +KKPVI+ GDLN A Q ID+ NP N ++AGFTDEER F FL GFVD+FR+
Sbjct: 131 AGLARKKPVIVCGDLNVAAQPIDLKNPDSNHKNAGFTDEERAKF-QQFLDHGFVDSFRSL 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G YT+W Y R+ N GWR+DYFLVSQ+ D+ D I +V GSDH P+ L
Sbjct: 190 YPDKEGAYTWWSYMFKARERNAGWRIDYFLVSQNGKDRIQDVIIHNEVMGSDHCPVELEW 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|331702430|ref|YP_004399389.1| exodeoxyribonuclease III Xth [Lactobacillus buchneri NRRL B-30929]
gi|329129773|gb|AEB74326.1| exodeoxyribonuclease III Xth [Lactobacillus buchneri NRRL B-30929]
Length = 256
Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 119/181 (65%), Gaps = 3/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
P+ VTYG+ + D EGR +T E+ F+L++ YVPNSG GL+RL +R+ W+ + Y+
Sbjct: 73 PMHVTYGINSDEFDHEGRAITLEYPDFYLVTSYVPNSGAGLKRLDFRMG-WNKAFYQYLT 131
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
EL+ KKPVIL GDLN AH+EI++ NP N +AGFTDEERQ F L GF+DTFR +
Sbjct: 132 ELDAKKPVILCGDLNVAHKEIELKNPQSNHHNAGFTDEERQDF-TKLLKAGFMDTFRHFY 190
Query: 123 RGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
Y++W YR R N GWR+DYF+ S LAD+ DS IL DV GSDH P+ L K
Sbjct: 191 PDQTDIYSWWSYRFHSRDRNAGWRIDYFVASNRLADQIEDSKILTDVFGSDHCPVELDTK 250
Query: 182 L 182
L
Sbjct: 251 L 251
>gi|258507959|ref|YP_003170710.1| exodeoxyribonuclease III [Lactobacillus rhamnosus GG]
gi|257147886|emb|CAR86859.1| Exodeoxyribonuclease III [Lactobacillus rhamnosus GG]
Length = 252
Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 116/180 (64%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VTYG+GI +HD+EGR++T E+ F+L++ Y PNSG L+RL YR +WD +Y
Sbjct: 72 KPLNVTYGMGIPEHDTEGRIITLEYTKFYLMTVYTPNSGGELKRLDYR-QQWDRDFLAYT 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL KKP++ GDLN AH+ ID+ N N +AGFTDEER F L+ GF+DTFR
Sbjct: 131 NELAAKKPLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERADFTKQ-LNSGFIDTFRHF 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R N GWR+DYF+ S + D+ IL + GSDH P+ L+ +
Sbjct: 190 YPDTVTYSWWSYRFHARANNAGWRIDYFVASSAFQPYIQDAKILTQIMGSDHCPVELVTQ 249
>gi|293571415|ref|ZP_06682444.1| exodeoxyribonuclease III [Enterococcus faecium E980]
gi|430819435|ref|ZP_19438090.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E0045]
gi|431736951|ref|ZP_19525908.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1972]
gi|291608506|gb|EFF37799.1| exodeoxyribonuclease III [Enterococcus faecium E980]
gi|430440618|gb|ELA50858.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E0045]
gi|430599606|gb|ELB37304.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1972]
Length = 250
Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 124/182 (68%), Gaps = 4/182 (2%)
Query: 2 KP-LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
KP L+ TYG+GI HD+EGRL+T E+ FFL++CY PNS L+RL YR+ EW+ + +Y
Sbjct: 71 KPALNATYGMGIDIHDTEGRLITLEYSDFFLVTCYTPNSQSELKRLDYRL-EWEEAFYNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++ L+K+KPVI+ GDLN AHQ ID+ N N+++AGFT EER + + L GF+DTFR
Sbjct: 130 LENLKKQKPVIVCGDLNVAHQTIDLKNWKTNQKNAGFTPEERAAL-SRLLDNGFIDTFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G Y++W YR RK N GWR+DYFL S+ L + D+ I D+ GSDH P+ L
Sbjct: 189 FYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLEPRLADAKIHTDIMGSDHCPVELD 248
Query: 180 LK 181
LK
Sbjct: 249 LK 250
>gi|188588613|ref|YP_001921245.1| exodeoxyribonuclease III [Clostridium botulinum E3 str. Alaska E43]
gi|188498894|gb|ACD52030.1| exodeoxyribonuclease III [Clostridium botulinum E3 str. Alaska E43]
Length = 251
Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 119/181 (65%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+++ G+GI +HD EGR++T EF+ F+L++ Y PNS L R+ YR+ W+ Y+
Sbjct: 73 KPLNISLGIGIEEHDKEGRVLTLEFEEFYLVNVYTPNSQQKLARIDYRMA-WENDFRDYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL K K VI+ GDLN AH+EID+ NP NR +AGF+DEER+ F L GF+DT+R
Sbjct: 132 NELNKDKSVIVCGDLNVAHKEIDLKNPKNNRNNAGFSDEEREKFDE-LLKSGFIDTYRYF 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R N GWR+DYFLVS+ D+ D+ I + GSDH P+ LI+
Sbjct: 191 YPDKEGAYSWWSYRFNARANNAGWRIDYFLVSKDFEDRLVDANIHTQIEGSDHCPVELII 250
Query: 181 K 181
K
Sbjct: 251 K 251
>gi|66910408|gb|AAH97053.1| Apex1 protein [Danio rerio]
gi|197246969|gb|AAI64240.1| Apex1 protein [Danio rerio]
Length = 296
Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 118/182 (64%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYG+G +HD EGR++TAEF FFL++ YVPN+ GL RL YR T WD +Y+
Sbjct: 117 EPLNVTYGIGKEEHDKEGRVITAEFPDFFLVTAYVPNASRGLVRLDYRKT-WDVDFRAYL 175
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L+ +KP++L GDLN AHQEID+ NP GNR++AGFT EER+ F L GF D+FR
Sbjct: 176 CGLDARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPEEREGF-TQLLEAGFTDSFREL 234
Query: 122 HRG-VVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWRLDYF++S +L DS I GSDH PI L L
Sbjct: 235 YPDQAYAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLCDSKIRNTAMGSDHCPITLFL 294
Query: 181 KL 182
+
Sbjct: 295 AV 296
>gi|317374848|sp|A0MTA1.1|APEX1_DANRE RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
Full=APEX nuclease; Short=APEN; AltName:
Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
endonuclease 1; Short=zAP1
gi|117549778|gb|ABK35081.1| apurinic/apyrimidinic endonuclease 1 [Danio rerio]
gi|117549788|gb|ABK35082.1| apurinic/apyrimidinic endonuclease 1 [Danio rerio]
gi|117549790|gb|ABK35083.1| apurinic/apyrimidinic endonuclease 1 [Danio rerio]
gi|117549792|gb|ABK35084.1| apurinic/apyrimidinic endonuclease 1 [Danio rerio]
Length = 310
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 118/182 (64%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYG+G +HD EGR++TAEF FFL++ YVPN+ GL RL YR T WD +Y+
Sbjct: 131 EPLNVTYGIGKEEHDKEGRVITAEFPDFFLVTAYVPNASRGLVRLDYRKT-WDVDFRAYL 189
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L+ +KP++L GDLN AHQEID+ NP GNR++AGFT EER+ F L GF D+FR
Sbjct: 190 CGLDARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPEEREGF-TQLLEAGFTDSFREL 248
Query: 122 HRG-VVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWRLDYF++S +L DS I GSDH PI L L
Sbjct: 249 YPDQAYAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLCDSKIRNTAMGSDHCPITLFL 308
Query: 181 KL 182
+
Sbjct: 309 AV 310
>gi|431033474|ref|ZP_19491320.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1590]
gi|430564575|gb|ELB03759.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1590]
Length = 250
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 122/179 (68%), Gaps = 3/179 (1%)
Query: 4 LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKE 63
L+ TYG+GI HD+EGRL+T E+ FFL++CY PNS L+RL YR+ EW+ + +Y++
Sbjct: 74 LNATYGMGIDIHDTEGRLITLEYSDFFLVTCYTPNSQSELKRLDYRL-EWEEAFYNYLEN 132
Query: 64 LEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHR 123
L+K+KPVI+ GDLN AHQ ID+ N N+++AGFT EER + + L GF+DTFR +
Sbjct: 133 LKKQKPVIVCGDLNVAHQTIDLKNWKTNQKNAGFTPEERAAL-SRLLDNGFIDTFRYFYP 191
Query: 124 GVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
G Y++W YR RK N GWR+DYFL S+ L + D+ I D+ GSDH P+ L LK
Sbjct: 192 TQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLTPRLADAKIHTDIMGSDHCPVELDLK 250
>gi|456012224|gb|EMF45930.1| Exodeoxyribonuclease III [Planococcus halocryophilus Or1]
Length = 252
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 121/178 (67%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLS+ YGLG+ + D+EGR++T EFD++++++ Y PNS GL RL YR+ W+ ++ S+V
Sbjct: 73 KPLSIQYGLGLEELDTEGRIITLEFDNYYVITVYTPNSQHGLLRLDYRLL-WEDAILSFV 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L+ KPV+L GDLN AH+EID+ NP N++++GFT EER FL KGFVDTFR
Sbjct: 132 KALDNHKPVLLCGDLNVAHEEIDLRNPKANKKNSGFTLEERGKM-TQFLEKGFVDTFRHF 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
H G Y++W YR R+ N GWR+DYFL SQ L + I D+ GSDH P+ L
Sbjct: 191 HPEEEGHYSWWSYRSNCREKNVGWRIDYFLASQRLVPALQSAKIHIDIWGSDHCPVEL 248
>gi|444522078|gb|ELV13303.1| DNA-(apurinic or apyrimidinic site) lyase [Tupaia chinensis]
Length = 318
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFD F L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEFDKFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLTDSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+SQSL DS I GSDH PI L L
Sbjct: 258 PDTPYAYTFWTYMMNARSKNVGWRLDYFLLSQSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|344305891|ref|XP_003421623.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like
[Loxodonta africana]
Length = 318
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 116/181 (64%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFD+F L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEFDAFVLVTVYVPNAGRGLVRLDYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L+L
Sbjct: 258 PDTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLLLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|229551812|ref|ZP_04440537.1| exodeoxyribonuclease III [Lactobacillus rhamnosus LMS2-1]
gi|421769410|ref|ZP_16206117.1| Exodeoxyribonuclease III [Lactobacillus rhamnosus LRHMDP2]
gi|421772307|ref|ZP_16208963.1| Exodeoxyribonuclease III [Lactobacillus rhamnosus LRHMDP3]
gi|229314756|gb|EEN80729.1| exodeoxyribonuclease III [Lactobacillus rhamnosus LMS2-1]
gi|411183875|gb|EKS51010.1| Exodeoxyribonuclease III [Lactobacillus rhamnosus LRHMDP3]
gi|411184541|gb|EKS51673.1| Exodeoxyribonuclease III [Lactobacillus rhamnosus LRHMDP2]
Length = 253
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 116/180 (64%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VTYG+GI +HD+EGR++T E+ F+L++ Y PNSG L+RL YR +WD +Y
Sbjct: 73 KPLNVTYGMGIPEHDTEGRIITLEYPKFYLMTVYTPNSGGELKRLDYR-QQWDRDFLAYT 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL KKP++ GDLN AH+ ID+ N N +AGFTDEER F L+ GF+DTFR
Sbjct: 132 NELAAKKPLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERADFTKQ-LNSGFIDTFRHF 190
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R N GWR+DYF+ S + D+ IL + GSDH P+ L+ +
Sbjct: 191 YPDTVTYSWWSYRFHARANNAGWRIDYFVASSAFQPYIQDAKILTQIMGSDHCPVELVTQ 250
>gi|350410618|ref|XP_003489091.1| PREDICTED: recombination repair protein 1-like [Bombus impatiens]
Length = 334
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP+ + YGL + DSEGRL+TAE+ +F+L++ YVPN+G L L R+ +W+ + +YV
Sbjct: 155 KPIDIKYGLDNVEFDSEGRLITAEYSNFYLVNVYVPNAGQKLITLPKRL-KWNEAFKAYV 213
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI+ GD+N AHQ+ID+ NP N+++AGFT EER +FL GFVDTFRA
Sbjct: 214 KNLDEKKPVIICGDMNVAHQKIDLKNPDTNKKNAGFTQEERSGM-TDFLDAGFVDTFRAL 272
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G YT+W Y R N GWRLDYFLVS+ + D D+ I +V GSDH PI L +
Sbjct: 273 YPDKEGAYTFWSYFANARSKNIGWRLDYFLVSEQIKDNVCDNVIRDEVYGSDHCPIVLYI 332
Query: 181 KL 182
+
Sbjct: 333 NI 334
>gi|348577629|ref|XP_003474586.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like [Cavia
porcellus]
Length = 318
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
P+ V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PIKVSYGIGEEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 257
Query: 123 -RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 258 PNAAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|260584873|ref|ZP_05852618.1| exodeoxyribonuclease III [Granulicatella elegans ATCC 700633]
gi|260157530|gb|EEW92601.1| exodeoxyribonuclease III [Granulicatella elegans ATCC 700633]
Length = 253
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 119/178 (66%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV YGLGI +HD EGR++TAE+ ++L++ Y PN+ L RLSYR W+ +++
Sbjct: 75 EPISVQYGLGIEEHDQEGRVITAEYADYYLVTVYTPNAKRDLTRLSYRQV-WEDDFLAFI 133
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE+ KPVI GDLN AH+EID+ NP N ++AGFT EER+ F + G VD FR +
Sbjct: 134 KKLEETKPVIFCGDLNVAHKEIDLANPKTNTKNAGFTKEEREKFD-QIVENGLVDAFRFR 192
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ VG YT+W Y G R N GWR+DYF+VS+ L + + I DVTGSDH P+ +
Sbjct: 193 YPEAVGAYTWWSYMGGARARNIGWRIDYFVVSEVLTSRIQEVKIRADVTGSDHCPVEM 250
>gi|258539213|ref|YP_003173712.1| exodeoxyribonuclease III [Lactobacillus rhamnosus Lc 705]
gi|385834871|ref|YP_005872645.1| exodeoxyribonuclease III [Lactobacillus rhamnosus ATCC 8530]
gi|257150889|emb|CAR89861.1| Exodeoxyribonuclease III [Lactobacillus rhamnosus Lc 705]
gi|355394362|gb|AER63792.1| exodeoxyribonuclease III [Lactobacillus rhamnosus ATCC 8530]
Length = 252
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 116/180 (64%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VTYG+GI +HD+EGR++T E+ F+L++ Y PNSG L+RL YR +WD +Y
Sbjct: 72 KPLNVTYGMGIPEHDTEGRIITLEYPKFYLMTVYTPNSGGELKRLDYR-QQWDRDFLAYT 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL KKP++ GDLN AH+ ID+ N N +AGFTDEER F L+ GF+DTFR
Sbjct: 131 NELAAKKPLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERADFTKQ-LNSGFIDTFRHF 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W YR R N GWR+DYF+ S + D+ IL + GSDH P+ L+ +
Sbjct: 190 YPDTVTYSWWSYRFHARANNAGWRIDYFVASSAFQPYIQDAKILTQIMGSDHCPVELVTQ 249
>gi|340719564|ref|XP_003398220.1| PREDICTED: LOW QUALITY PROTEIN: recombination repair protein 1-like
[Bombus terrestris]
Length = 357
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP+ + YGL + DSEGRL+TAE+ +F+L++ YVPN+G L L R+ +W+ + +YV
Sbjct: 178 KPIDIKYGLDNVEFDSEGRLITAEYSNFYLINVYVPNAGQKLITLPKRL-KWNEAFKAYV 236
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI+ GD+N AHQ+ID+ NP N+++AGFT EER +FL GFVDTFRA
Sbjct: 237 KNLDEKKPVIICGDMNVAHQKIDLKNPDTNKKNAGFTQEERSGM-TDFLDAGFVDTFRAL 295
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G YT+W Y R N GWRLDYFLVS+ + D D+ I V GSDH PI L +
Sbjct: 296 YPNKEGAYTFWSYFANARSKNIGWRLDYFLVSEQIKDNVCDNVIRDKVYGSDHCPIVLYI 355
Query: 181 KL 182
+
Sbjct: 356 NI 357
>gi|374583527|ref|ZP_09656621.1| exodeoxyribonuclease III [Desulfosporosinus youngiae DSM 17734]
gi|374419609|gb|EHQ92044.1| exodeoxyribonuclease III [Desulfosporosinus youngiae DSM 17734]
Length = 262
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 120/179 (67%), Gaps = 3/179 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I+PL++ YG+G +HD EGRL+T EF+ F++++ Y PNS GL RL YR+ +W+ +Y
Sbjct: 71 IEPLNIVYGMGKEEHDKEGRLITLEFEKFYVVTVYAPNSQRGLARLDYRM-KWEDDFLNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ LEK KPVI+ GDLN AH+E+D+ NP+ N+++AGFT EER F ++KGFVDTFR
Sbjct: 130 IIGLEKCKPVIVCGDLNVAHKEMDLKNPSTNKKNAGFTPEERSKFD-EVINKGFVDTFRF 188
Query: 121 QH-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ YT+W Y R N GWR+DYF VS L + ++ I DV GSDH P+GL
Sbjct: 189 FYPDKTQAYTWWSYMFNARANNAGWRIDYFCVSAELKSQLRNAVIYQDVLGSDHCPVGL 247
>gi|402574713|ref|YP_006624056.1| exodeoxyribonuclease III [Desulfosporosinus meridiei DSM 13257]
gi|402255910|gb|AFQ46185.1| exodeoxyribonuclease III [Desulfosporosinus meridiei DSM 13257]
Length = 251
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 119/181 (65%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+ + YG+G +HD EGR++T EF+ ++++ Y PNS GL RL YR+ +W+ ++
Sbjct: 72 EPMKICYGIGQEEHDKEGRVITLEFEKHYVVTVYTPNSQRGLARLEYRM-KWEEEFLKFI 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LEK KPVI GDLN AH+EID+ NP+ NR++AGF+ EER FG + GF+DTFR
Sbjct: 131 KDLEKNKPVIFCGDLNVAHEEIDLKNPSSNRKNAGFSMEERNKFGE-IIKSGFIDTFRYF 189
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWR+DYF VS+ L D+ + I DV GSDH P+GL +
Sbjct: 190 YPDKTNAYTWWSYMFNARVNNAGWRIDYFCVSEILKDRLKAAVIYNDVMGSDHCPVGLEM 249
Query: 181 K 181
+
Sbjct: 250 E 250
>gi|291536334|emb|CBL09446.1| exodeoxyribonuclease III [Roseburia intestinalis M50/1]
Length = 246
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYG+GI +HD EGR++T E+ F++++CY PNS + L RL YR+ +W+ +Y+
Sbjct: 66 EPLNVTYGIGIEEHDKEGRVITLEYPDFYMVTCYTPNSQNELARLPYRM-QWEDDFRAYL 124
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L+ KPVIL GDLN AH+EID+ NP NR++AGF+DEER+ L GF DTFR
Sbjct: 125 KRLDGSKPVILCGDLNVAHEEIDLKNPKTNRKNAGFSDEEREKM-TKLLDAGFTDTFRYF 183
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W YR R+ N GWR+DYF+ S+ + DK + I DV GSDH P+ L +
Sbjct: 184 YPDTEQIYSWWSYRFRAREKNAGWRIDYFITSKRMNDKLTGAKIHTDVFGSDHCPVELDI 243
Query: 181 KL 182
L
Sbjct: 244 DL 245
>gi|223935760|ref|ZP_03627676.1| exodeoxyribonuclease III Xth [bacterium Ellin514]
gi|223895768|gb|EEF62213.1| exodeoxyribonuclease III Xth [bacterium Ellin514]
Length = 250
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 120/179 (67%), Gaps = 2/179 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP+SV+ G+ +HD EGR++T+E+ FFL++ YVPNS L RL+YR +WD SY+
Sbjct: 73 KPISVSLGINCPEHDMEGRVLTSEYPEFFLVNVYVPNSKRELTRLAYR-QQWDCDFLSYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LEKKKPVI GDLN AH EID+ NP N ++ GFT EER F + + GF+DTFR
Sbjct: 132 KKLEKKKPVIFCGDLNVAHTEIDLANPKANVKNHGFTPEERAGF-STVIKAGFIDTFREF 190
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+G Y++W G R N GWR+DYFL+S +L + ++I P++ GSDH P+G+ L
Sbjct: 191 EKGGGHYSWWSPMGGARSRNVGWRIDYFLISSALRPRLKRAFIQPNIPGSDHCPVGIEL 249
>gi|357405967|ref|YP_004917891.1| exodeoxyribonuclease [Methylomicrobium alcaliphilum 20Z]
gi|351718632|emb|CCE24306.1| Exodeoxyribonuclease [Methylomicrobium alcaliphilum 20Z]
Length = 254
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 117/182 (64%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+ + +GI +HD EGR++ AEF++F LL+ YVPNSG+ L RL YR WD L +Y
Sbjct: 75 EPIQILQDIGIDEHDQEGRVIAAEFENFILLNVYVPNSGEKLVRLDYRKI-WDKELLAYF 133
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGN-RRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++L +KP+I GD N AHQEIDI P N +SAG+T E + L GFVDTFR
Sbjct: 134 QQLNSRKPLIACGDFNVAHQEIDIARPKANYNKSAGYTQTEIDGI-SRMLEAGFVDTFRH 192
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
H V Y++W YR G R N GWR+DY L SQ+L K +++I PD+ GSDH P+G+ +
Sbjct: 193 LHPETVAYSWWSYRAGARAKNIGWRIDYVLTSQALIGKVKNAFIAPDIFGSDHCPVGIEI 252
Query: 181 KL 182
L
Sbjct: 253 DL 254
>gi|301788284|ref|XP_002929556.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 1
[Ailuropoda melanoleuca]
gi|301788286|ref|XP_002929557.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 2
[Ailuropoda melanoleuca]
gi|301788288|ref|XP_002929558.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 3
[Ailuropoda melanoleuca]
gi|281345899|gb|EFB21483.1| hypothetical protein PANDA_019762 [Ailuropoda melanoleuca]
Length = 318
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFD+F L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEFDAFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 258 PNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|310831095|ref|YP_003969738.1| putative apurinic-apyrimidinic endonuclease 1 [Cafeteria
roenbergensis virus BV-PW1]
gi|309386279|gb|ADO67139.1| putative apurinic-apyrimidinic endonuclease 1 [Cafeteria
roenbergensis virus BV-PW1]
Length = 262
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 114/181 (62%), Gaps = 2/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP+S G+ D EGR++T EF ++L+ Y PNSG GL RL YR EWD + Y
Sbjct: 83 KPISTYLGMNQPGEDDEGRMITLEFKEYYLIHVYTPNSGQGLVRLQYRTEEWDKNFRKYC 142
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L+K KP+I+ GDLN A++ ID+ NP+ N+++AGFTD ER+SF +DTFR
Sbjct: 143 ANLQKIKPIIICGDLNVANENIDLANPSSNKKNAGFTDVERKSFKLTLTKLNLIDTFRYL 202
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ + Y++W Y H R N GWR+DYFLVS+ L K DS IL + GSDH+P+ ILK
Sbjct: 203 YPTDIKYSFWTYYHNARPKNIGWRIDYFLVSEKLLPKVKDSNILTHIMGSDHAPV--ILK 260
Query: 182 L 182
L
Sbjct: 261 L 261
>gi|355668893|gb|AER94340.1| APEX nuclease 1 [Mustela putorius furo]
Length = 317
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFD+F L++ YVPN+G GL RL YR WD + ++K
Sbjct: 138 PLKVSYGIGEEEHDQEGRVIVAEFDAFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 196
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 197 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 256
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 257 PNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 316
Query: 182 L 182
L
Sbjct: 317 L 317
>gi|340751024|ref|ZP_08687853.1| exodeoxyribonuclease [Fusobacterium mortiferum ATCC 9817]
gi|229421274|gb|EEO36321.1| exodeoxyribonuclease [Fusobacterium mortiferum ATCC 9817]
Length = 251
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP+SV YG+GI +HD EGR++T EF+ F++++ Y PNS + L RL YR+ +W+ +Y+
Sbjct: 72 KPISVHYGIGIEEHDKEGRVITLEFEKFYMITVYTPNSQEKLARLDYRM-KWEEDFKNYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL+KKKPVI+ GDLN AH+EID+ NP NR++AGF+DEER+ L GFVD+FR
Sbjct: 131 LELDKKKPVIVCGDLNVAHKEIDLKNPKTNRKNAGFSDEEREKM-TKLLESGFVDSFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W YR R N GWR+DYFLVS + + + I ++ GSDH P+ L +
Sbjct: 190 YPNKTDIYSWWSYRFSARAKNAGWRIDYFLVSDRIKENMKGAEIHTEILGSDHCPVLLNI 249
Query: 181 KL 182
L
Sbjct: 250 DL 251
>gi|406882207|gb|EKD30059.1| hypothetical protein ACD_78C00169G0004 [uncultured bacterium (gcode
4)]
Length = 267
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/183 (47%), Positives = 122/183 (66%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++P+SV YGLG+ +HD EGR++T EF+ +F ++ Y PN+ L RL YR WD Y
Sbjct: 87 VEPISVRYGLGMKEHDQEGRIITLEFEKYFFVTVYTPNAKSELERLEYR-QLWDSLFFDY 145
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K LE +KPVI+ GDLN AHQEID+ NP NR +AGFTDEER FG ++L+ GF+DTFR
Sbjct: 146 LKRLEVEKPVIVCGDLNVAHQEIDLTNPKPNRWNAGFTDEERAGFG-HYLANGFIDTFRH 204
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G YT+W R N GWR+DYFL+S+ L ++I ++ GSDH P+G+
Sbjct: 205 FYPDKTGEYTWWSNFFKSRDRNIGWRIDYFLISERLVTNLKSAFIRQEIRGSDHCPVGIK 264
Query: 180 LKL 182
+++
Sbjct: 265 IEI 267
>gi|149692696|ref|XP_001505181.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like [Equus
caballus]
Length = 318
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFD+F L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEFDAFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 258 PNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|426376144|ref|XP_004054867.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Gorilla
gorilla gorilla]
gi|426376146|ref|XP_004054868.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Gorilla
gorilla gorilla]
gi|426376148|ref|XP_004054869.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Gorilla
gorilla gorilla]
gi|426376150|ref|XP_004054870.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Gorilla
gorilla gorilla]
Length = 318
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 258 PNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|223278420|ref|NP_001138591.1| DNA-(apurinic or apyrimidinic site) lyase [Canis lupus familiaris]
Length = 318
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFD+F L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEFDTFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 258 PNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|125490347|ref|NP_001074954.1| DNA-(apurinic or apyrimidinic site) lyase [Pan troglodytes]
gi|397481065|ref|XP_003811777.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Pan paniscus]
gi|397481067|ref|XP_003811778.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Pan paniscus]
gi|397481069|ref|XP_003811779.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Pan paniscus]
gi|146286033|sp|A1YFZ3.1|APEX1_PANPA RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
Full=APEX nuclease; Short=APEN; AltName:
Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox
factor-1; Contains: RecName: Full=DNA-(apurinic or
apyrimidinic site) lyase, mitochondrial
gi|146286034|sp|A2T6Y4.1|APEX1_PANTR RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
Full=APEX nuclease; Short=APEN; AltName:
Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox
factor-1; Contains: RecName: Full=DNA-(apurinic or
apyrimidinic site) lyase, mitochondrial
gi|219474|dbj|BAA02633.1| APEX nuclease [Homo sapiens]
gi|1710232|gb|AAB50212.1| apurinic/apyrimidinic endonuclease [Homo sapiens]
gi|12803075|gb|AAH02338.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens]
gi|14198174|gb|AAH08145.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens]
gi|17939646|gb|AAH19291.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens]
gi|30583311|gb|AAP35900.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens]
gi|61358640|gb|AAX41599.1| APEX nuclease 1 [synthetic construct]
gi|61362429|gb|AAX42220.1| APEX nuclease 1 [synthetic construct]
gi|61362434|gb|AAX42221.1| APEX nuclease 1 [synthetic construct]
gi|121483845|gb|ABM54218.1| APEX1 [Pan paniscus]
gi|123981822|gb|ABM82740.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [synthetic
construct]
gi|123996645|gb|ABM85924.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [synthetic
construct]
gi|124111123|gb|ABM91939.1| APEX1 [Pan troglodytes]
gi|208965824|dbj|BAG72926.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [synthetic
construct]
gi|410220880|gb|JAA07659.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Pan
troglodytes]
gi|410220882|gb|JAA07660.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Pan
troglodytes]
gi|410220884|gb|JAA07661.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Pan
troglodytes]
gi|410256572|gb|JAA16253.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Pan
troglodytes]
gi|410256574|gb|JAA16254.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Pan
troglodytes]
gi|410256576|gb|JAA16255.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Pan
troglodytes]
gi|410294028|gb|JAA25614.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Pan
troglodytes]
gi|410294030|gb|JAA25615.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Pan
troglodytes]
gi|410294032|gb|JAA25616.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Pan
troglodytes]
gi|1090503|prf||2019234A APEX nuclease
Length = 318
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 258 PNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|113983|sp|P23196.2|APEX1_BOVIN RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
Full=APEX nuclease; Short=APEN; AltName:
Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox
factor-1; Contains: RecName: Full=DNA-(apurinic or
apyrimidinic site) lyase, mitochondrial
gi|118|emb|CAA40014.1| BAP 1 [Bos taurus]
Length = 318
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 116/181 (64%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AE+D+F L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEYDAFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLTDSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+SQS+ DS I GSDH PI L L
Sbjct: 258 PNTAYAYTFWTYMMNARSKNVGWRLDYFLLSQSVLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|340347509|ref|ZP_08670617.1| exodeoxyribonuclease III [Prevotella dentalis DSM 3688]
gi|433653537|ref|YP_007297391.1| exodeoxyribonuclease III [Prevotella dentalis DSM 3688]
gi|339609205|gb|EGQ14080.1| exodeoxyribonuclease III [Prevotella dentalis DSM 3688]
gi|433304070|gb|AGB29885.1| exodeoxyribonuclease III [Prevotella dentalis DSM 3688]
Length = 266
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/186 (46%), Positives = 120/186 (64%), Gaps = 8/186 (4%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGL------RRLSYRITEWDP 55
+PL VTYG+G +HD EGR++T E+ F+L++CY PNS D + RRL YR+T W+
Sbjct: 83 EPLGVTYGIGKEEHDHEGRVITLEYPDFYLITCYTPNSQDTIKGELKPRRLGYRMT-WED 141
Query: 56 SLSSYVKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFV 115
Y+ L+K KPVI+ GDLN AH+E+D+ NP N +AGFTDEER+ L GF+
Sbjct: 142 DFREYMMRLDKNKPVIMCGDLNVAHEEMDLKNPKTNHNNAGFTDEEREKM-TTLLGSGFL 200
Query: 116 DTFRAQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSP 175
D+FR + V Y++W YR R+ N GWR+DYF+ S L D+ D+ I ++ GSDH P
Sbjct: 201 DSFRMLYPEQVTYSWWSYRMRAREKNTGWRIDYFITSDRLRDRIADAKIHTEIMGSDHCP 260
Query: 176 IGLILK 181
+ L LK
Sbjct: 261 VELDLK 266
>gi|257413807|ref|ZP_04744296.2| exodeoxyribonuclease III [Roseburia intestinalis L1-82]
gi|257202214|gb|EEV00499.1| exodeoxyribonuclease III [Roseburia intestinalis L1-82]
gi|291538795|emb|CBL11906.1| exodeoxyribonuclease III [Roseburia intestinalis XB6B4]
Length = 256
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYG+GI +HD EGR++T E+ F++++CY PNS + L RL YR+ +W+ +Y+
Sbjct: 76 EPLNVTYGIGIEEHDKEGRVITLEYPDFYMVTCYTPNSQNELARLPYRM-QWEDDFRAYL 134
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L+ KPVIL GDLN AH+EID+ NP NR++AGF+DEER+ L GF DTFR
Sbjct: 135 KRLDGSKPVILCGDLNVAHEEIDLKNPKTNRKNAGFSDEEREKM-TKLLDAGFTDTFRYF 193
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W YR R+ N GWR+DYF+ S+ + DK + I DV GSDH P+ L +
Sbjct: 194 YPDTEQIYSWWSYRFRAREKNAGWRIDYFITSKRMNDKLTGAKIHTDVFGSDHCPVELDI 253
Query: 181 KL 182
L
Sbjct: 254 DL 255
>gi|30585287|gb|AAP36916.1| Homo sapiens APEX nuclease (multifunctional DNA repair enzyme) 1
[synthetic construct]
gi|60653967|gb|AAX29676.1| APEX nuclease 1 [synthetic construct]
Length = 319
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 258 PNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|261208808|ref|ZP_05923245.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
[Enterococcus faecium TC 6]
gi|289566402|ref|ZP_06446829.1| exodeoxyribonuclease III [Enterococcus faecium D344SRF]
gi|294614472|ref|ZP_06694388.1| exodeoxyribonuclease III [Enterococcus faecium E1636]
gi|430849109|ref|ZP_19466891.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1185]
gi|260077310|gb|EEW65030.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
[Enterococcus faecium TC 6]
gi|289161777|gb|EFD09650.1| exodeoxyribonuclease III [Enterococcus faecium D344SRF]
gi|291592780|gb|EFF24373.1| exodeoxyribonuclease III [Enterococcus faecium E1636]
gi|430538322|gb|ELA78615.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1185]
Length = 250
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 125/182 (68%), Gaps = 4/182 (2%)
Query: 2 KP-LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
KP L+ TYG+GI HD+EGRL+T E+ FFL++CY PNS L+RL YR+ EW+ + +Y
Sbjct: 71 KPALNATYGMGIDIHDTEGRLITLEYSDFFLVTCYTPNSQSELKRLDYRL-EWEEAFYNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++ L+K+KPVI+ GDLN AHQ+ID+ N N+++AGFT EER + + L GF+DTFR
Sbjct: 130 LENLKKQKPVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAAL-SRLLDNGFIDTFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G Y++W YR RK N GWR+DYFL S+ L + D+ I D+ GSDH P+ L
Sbjct: 189 FYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLEPRLADAKIHTDIMGSDHCPVELD 248
Query: 180 LK 181
L+
Sbjct: 249 LQ 250
>gi|69245045|ref|ZP_00603203.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
[Enterococcus faecium DO]
gi|314939354|ref|ZP_07846596.1| exodeoxyribonuclease III [Enterococcus faecium TX0133a04]
gi|314944126|ref|ZP_07850782.1| exodeoxyribonuclease III [Enterococcus faecium TX0133C]
gi|314949042|ref|ZP_07852404.1| exodeoxyribonuclease III [Enterococcus faecium TX0082]
gi|314953542|ref|ZP_07856453.1| exodeoxyribonuclease III [Enterococcus faecium TX0133A]
gi|314994499|ref|ZP_07859775.1| exodeoxyribonuclease III [Enterococcus faecium TX0133B]
gi|314998115|ref|ZP_07863002.1| exodeoxyribonuclease III [Enterococcus faecium TX0133a01]
gi|389867864|ref|YP_006375287.1| exodeoxyribonuclease III [Enterococcus faecium DO]
gi|424789721|ref|ZP_18216358.1| exodeoxyribonuclease III [Enterococcus faecium V689]
gi|424802562|ref|ZP_18228061.1| exodeoxyribonuclease III [Enterococcus faecium S447]
gi|424844097|ref|ZP_18268717.1| exodeoxyribonuclease III [Enterococcus faecium R501]
gi|424856557|ref|ZP_18280766.1| exodeoxyribonuclease III [Enterococcus faecium R499]
gi|424898737|ref|ZP_18322301.1| exodeoxyribonuclease III [Enterococcus faecium R497]
gi|424950070|ref|ZP_18365248.1| exodeoxyribonuclease III [Enterococcus faecium R496]
gi|424953364|ref|ZP_18368333.1| exodeoxyribonuclease III [Enterococcus faecium R494]
gi|424956623|ref|ZP_18371393.1| exodeoxyribonuclease III [Enterococcus faecium R446]
gi|424959074|ref|ZP_18373681.1| exodeoxyribonuclease III [Enterococcus faecium P1986]
gi|424963467|ref|ZP_18377681.1| exodeoxyribonuclease III [Enterococcus faecium P1190]
gi|424967725|ref|ZP_18381407.1| exodeoxyribonuclease III [Enterococcus faecium P1140]
gi|424970445|ref|ZP_18383957.1| exodeoxyribonuclease III [Enterococcus faecium P1139]
gi|424974530|ref|ZP_18387759.1| exodeoxyribonuclease III [Enterococcus faecium P1137]
gi|424978847|ref|ZP_18391732.1| exodeoxyribonuclease III [Enterococcus faecium P1123]
gi|424980945|ref|ZP_18393702.1| exodeoxyribonuclease III [Enterococcus faecium ERV99]
gi|424982894|ref|ZP_18395511.1| exodeoxyribonuclease III [Enterococcus faecium ERV69]
gi|424987691|ref|ZP_18400056.1| exodeoxyribonuclease III [Enterococcus faecium ERV38]
gi|424991509|ref|ZP_18403654.1| exodeoxyribonuclease III [Enterococcus faecium ERV26]
gi|424994871|ref|ZP_18406788.1| exodeoxyribonuclease III [Enterococcus faecium ERV168]
gi|424999026|ref|ZP_18410676.1| exodeoxyribonuclease III [Enterococcus faecium ERV165]
gi|424999959|ref|ZP_18411546.1| exodeoxyribonuclease III [Enterococcus faecium ERV161]
gi|425003158|ref|ZP_18414540.1| exodeoxyribonuclease III [Enterococcus faecium ERV102]
gi|425007472|ref|ZP_18418599.1| exodeoxyribonuclease III [Enterococcus faecium ERV1]
gi|425012108|ref|ZP_18422948.1| exodeoxyribonuclease III [Enterococcus faecium E422]
gi|425013534|ref|ZP_18424261.1| exodeoxyribonuclease III [Enterococcus faecium E417]
gi|425017356|ref|ZP_18427864.1| exodeoxyribonuclease III [Enterococcus faecium C621]
gi|425021463|ref|ZP_18431716.1| exodeoxyribonuclease III [Enterococcus faecium C497]
gi|425029095|ref|ZP_18435294.1| exodeoxyribonuclease III [Enterococcus faecium C1904]
gi|425033598|ref|ZP_18438554.1| exodeoxyribonuclease III [Enterococcus faecium 515]
gi|425034552|ref|ZP_18439436.1| exodeoxyribonuclease III [Enterococcus faecium 514]
gi|425038640|ref|ZP_18443244.1| exodeoxyribonuclease III [Enterococcus faecium 513]
gi|425042587|ref|ZP_18446908.1| exodeoxyribonuclease III [Enterococcus faecium 511]
gi|425044172|ref|ZP_18448350.1| exodeoxyribonuclease III [Enterococcus faecium 510]
gi|425049630|ref|ZP_18453458.1| exodeoxyribonuclease III [Enterococcus faecium 509]
gi|425051314|ref|ZP_18454984.1| exodeoxyribonuclease III [Enterococcus faecium 506]
gi|425059576|ref|ZP_18462909.1| exodeoxyribonuclease III [Enterococcus faecium 503]
gi|68196046|gb|EAN10478.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
[Enterococcus faecium DO]
gi|313587883|gb|EFR66728.1| exodeoxyribonuclease III [Enterococcus faecium TX0133a01]
gi|313591110|gb|EFR69955.1| exodeoxyribonuclease III [Enterococcus faecium TX0133B]
gi|313594421|gb|EFR73266.1| exodeoxyribonuclease III [Enterococcus faecium TX0133A]
gi|313597294|gb|EFR76139.1| exodeoxyribonuclease III [Enterococcus faecium TX0133C]
gi|313641358|gb|EFS05938.1| exodeoxyribonuclease III [Enterococcus faecium TX0133a04]
gi|313644519|gb|EFS09099.1| exodeoxyribonuclease III [Enterococcus faecium TX0082]
gi|388533113|gb|AFK58305.1| exodeoxyribonuclease III [Enterococcus faecium DO]
gi|402919549|gb|EJX40134.1| exodeoxyribonuclease III [Enterococcus faecium S447]
gi|402920364|gb|EJX40884.1| exodeoxyribonuclease III [Enterococcus faecium R501]
gi|402921768|gb|EJX42193.1| exodeoxyribonuclease III [Enterococcus faecium V689]
gi|402929762|gb|EJX49492.1| exodeoxyribonuclease III [Enterococcus faecium R499]
gi|402932351|gb|EJX51867.1| exodeoxyribonuclease III [Enterococcus faecium R497]
gi|402933877|gb|EJX53281.1| exodeoxyribonuclease III [Enterococcus faecium R496]
gi|402939250|gb|EJX58182.1| exodeoxyribonuclease III [Enterococcus faecium R494]
gi|402945602|gb|EJX63940.1| exodeoxyribonuclease III [Enterococcus faecium R446]
gi|402949215|gb|EJX67295.1| exodeoxyribonuclease III [Enterococcus faecium P1190]
gi|402951471|gb|EJX69397.1| exodeoxyribonuclease III [Enterococcus faecium P1986]
gi|402953715|gb|EJX71407.1| exodeoxyribonuclease III [Enterococcus faecium P1140]
gi|402956143|gb|EJX73618.1| exodeoxyribonuclease III [Enterococcus faecium P1137]
gi|402960194|gb|EJX77359.1| exodeoxyribonuclease III [Enterococcus faecium P1123]
gi|402961733|gb|EJX78737.1| exodeoxyribonuclease III [Enterococcus faecium P1139]
gi|402964834|gb|EJX81589.1| exodeoxyribonuclease III [Enterococcus faecium ERV99]
gi|402972757|gb|EJX88933.1| exodeoxyribonuclease III [Enterococcus faecium ERV69]
gi|402973819|gb|EJX89911.1| exodeoxyribonuclease III [Enterococcus faecium ERV38]
gi|402976580|gb|EJX92460.1| exodeoxyribonuclease III [Enterococcus faecium ERV26]
gi|402978889|gb|EJX94596.1| exodeoxyribonuclease III [Enterococcus faecium ERV168]
gi|402980958|gb|EJX96520.1| exodeoxyribonuclease III [Enterococcus faecium ERV165]
gi|402990162|gb|EJY05046.1| exodeoxyribonuclease III [Enterococcus faecium ERV161]
gi|402992555|gb|EJY07247.1| exodeoxyribonuclease III [Enterococcus faecium ERV102]
gi|402994365|gb|EJY08901.1| exodeoxyribonuclease III [Enterococcus faecium E422]
gi|402994911|gb|EJY09408.1| exodeoxyribonuclease III [Enterococcus faecium ERV1]
gi|403000822|gb|EJY14913.1| exodeoxyribonuclease III [Enterococcus faecium E417]
gi|403004470|gb|EJY18273.1| exodeoxyribonuclease III [Enterococcus faecium C621]
gi|403004532|gb|EJY18326.1| exodeoxyribonuclease III [Enterococcus faecium C1904]
gi|403006678|gb|EJY20306.1| exodeoxyribonuclease III [Enterococcus faecium C497]
gi|403009330|gb|EJY22785.1| exodeoxyribonuclease III [Enterococcus faecium 515]
gi|403019114|gb|EJY31740.1| exodeoxyribonuclease III [Enterococcus faecium 513]
gi|403020199|gb|EJY32755.1| exodeoxyribonuclease III [Enterococcus faecium 514]
gi|403022989|gb|EJY35297.1| exodeoxyribonuclease III [Enterococcus faecium 511]
gi|403026721|gb|EJY38668.1| exodeoxyribonuclease III [Enterococcus faecium 509]
gi|403030625|gb|EJY42301.1| exodeoxyribonuclease III [Enterococcus faecium 510]
gi|403037892|gb|EJY49141.1| exodeoxyribonuclease III [Enterococcus faecium 506]
gi|403043490|gb|EJY54397.1| exodeoxyribonuclease III [Enterococcus faecium 503]
Length = 269
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 124/182 (68%), Gaps = 4/182 (2%)
Query: 2 KP-LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
KP L+ TYG+GI HD+EGRL+T E+ FFL++CY PNS L+RL YR+ EW+ + +Y
Sbjct: 90 KPALNATYGMGIDIHDTEGRLITLEYSDFFLVTCYTPNSQSELKRLDYRL-EWEEAFYNY 148
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++ L+K+KPVI+ GDLN AHQ+ID+ N N+++AGFT EER + + L GF+DTFR
Sbjct: 149 LENLKKQKPVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAAL-SRLLDNGFIDTFRY 207
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G Y++W YR RK N GWR+DYFL S+ L D+ I D+ GSDH P+ L
Sbjct: 208 FYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLEPGLADAKIHTDIMGSDHCPVELD 267
Query: 180 LK 181
LK
Sbjct: 268 LK 269
>gi|157830335|pdb|1BIX|A Chain A, The Crystal Structure Of The Human Dna Repair Endonuclease
Hap1 Suggests The Recognition Of Extra-Helical
Deoxyribose At Dna Abasic Sites
Length = 287
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 108 PLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 166
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 167 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 226
Query: 123 RGV-VGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 227 PNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 286
Query: 182 L 182
L
Sbjct: 287 L 287
>gi|402875487|ref|XP_003901536.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Papio anubis]
gi|402875489|ref|XP_003901537.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Papio anubis]
Length = 318
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEFDSFVLVTTYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 258 PNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|384475785|ref|NP_001245038.1| DNA-(apurinic or apyrimidinic site) lyase [Macaca mulatta]
gi|90078218|dbj|BAE88789.1| unnamed protein product [Macaca fascicularis]
gi|355693074|gb|EHH27677.1| hypothetical protein EGK_17940 [Macaca mulatta]
gi|355767431|gb|EHH62612.1| hypothetical protein EGM_21005 [Macaca fascicularis]
gi|383417983|gb|AFH32205.1| DNA-(apurinic or apyrimidinic site) lyase [Macaca mulatta]
gi|384946780|gb|AFI36995.1| DNA-(apurinic or apyrimidinic site) lyase [Macaca mulatta]
gi|384946782|gb|AFI36996.1| DNA-(apurinic or apyrimidinic site) lyase [Macaca mulatta]
gi|384946784|gb|AFI36997.1| DNA-(apurinic or apyrimidinic site) lyase [Macaca mulatta]
Length = 318
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEFDSFVLVTTYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 258 PNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|380796163|gb|AFE69957.1| DNA-(apurinic or apyrimidinic site) lyase, partial [Macaca mulatta]
Length = 297
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 118 PLKVSYGIGEEEHDQEGRVIVAEFDSFVLVTTYVPNAGRGLVRLEYR-QRWDEAFRKFLK 176
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 177 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 236
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 237 PNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 296
Query: 182 L 182
L
Sbjct: 297 L 297
>gi|381184157|ref|ZP_09892815.1| exodeoxyribonuclease III [Listeriaceae bacterium TTU M1-001]
gi|380315948|gb|EIA19409.1| exodeoxyribonuclease III [Listeriaceae bacterium TTU M1-001]
Length = 251
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL V YGL +++HD EGR++T EF+ F+ ++ Y PNS L RL+YR++ ++ + +YV
Sbjct: 72 EPLRVFYGLSVAEHDQEGRVITLEFEQFYFITVYTPNSQPELARLAYRMS-FEEAFLNYV 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L+++KPVI GDLN AH+EID+ NP NRR+ GF+DEER F L GFVDTFR
Sbjct: 131 KNLDQEKPVIFCGDLNVAHKEIDLKNPKTNRRNPGFSDEERGKF-TTVLESGFVDTFRHF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R N GWR+DYF+VS L DK D+ I DV GSDH P+ L +
Sbjct: 190 YPEKEGAYSWWSYRMNARARNTGWRIDYFVVSSRLRDKLIDAKIHADVLGSDHCPVELTI 249
Query: 181 KL 182
L
Sbjct: 250 DL 251
>gi|60652565|gb|AAX28977.1| APEX nuclease 1 [synthetic construct]
Length = 319
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 258 PNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|381395703|ref|ZP_09921398.1| exodeoxyribonuclease III [Glaciecola punicea DSM 14233 = ACAM 611]
gi|379328582|dbj|GAB56531.1| exodeoxyribonuclease III [Glaciecola punicea DSM 14233 = ACAM 611]
Length = 255
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 121/181 (66%), Gaps = 3/181 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++P+ VT +GIS+HD EGR++ AEF F+L++ Y PNSG L+RL YR +WD +Y
Sbjct: 74 VEPIDVTKDIGISEHDQEGRVLCAEFSDFYLVTVYTPNSGSELKRLGYR-GQWDADFLTY 132
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGN-RRSAGFTDEERQSFGANFLSKGFVDTFR 119
+K LE KKPV++ GDLN AH+++D+ P N +SAG+T +E N ++ GF+D+FR
Sbjct: 133 IKALEAKKPVVICGDLNAAHKDLDLARPKPNYNKSAGYTQQEIDGID-NLIAAGFIDSFR 191
Query: 120 AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
H V Y++W YR G R+ N GWR+DYFLVS +LA D+ I D+ GSDH P+ +
Sbjct: 192 HVHPDTVKYSWWSYRAGARERNVGWRIDYFLVSSALAANISDAEIYDDIHGSDHCPVSVK 251
Query: 180 L 180
L
Sbjct: 252 L 252
>gi|162329924|pdb|2O3H|A Chain A, Crystal Structure Of The Human C65a Ape
Length = 285
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 106 PLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 164
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 165 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 224
Query: 123 RGV-VGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 225 PNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 284
Query: 182 L 182
L
Sbjct: 285 L 285
>gi|18375501|ref|NP_001632.2| DNA-(apurinic or apyrimidinic site) lyase [Homo sapiens]
gi|18375503|ref|NP_542379.1| DNA-(apurinic or apyrimidinic site) lyase [Homo sapiens]
gi|18375505|ref|NP_542380.1| DNA-(apurinic or apyrimidinic site) lyase [Homo sapiens]
gi|346644849|ref|NP_001231178.1| DNA-(apurinic or apyrimidinic site) lyase [Homo sapiens]
gi|113984|sp|P27695.2|APEX1_HUMAN RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
Full=APEX nuclease; Short=APEN; AltName:
Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
endonuclease 1; Short=APE-1; AltName: Full=REF-1;
AltName: Full=Redox factor-1; Contains: RecName:
Full=DNA-(apurinic or apyrimidinic site) lyase,
mitochondrial
gi|13399540|pdb|1E9N|A Chain A, A Second Divalent Metal Ion In The Active Site Of A New
Crystal Form Of Human ApurinicAPYRIMIDINIC ENDONUCLEASE,
Ape1, And Its Implications For The Catalytic Mechanism
gi|13399541|pdb|1E9N|B Chain B, A Second Divalent Metal Ion In The Active Site Of A New
Crystal Form Of Human ApurinicAPYRIMIDINIC ENDONUCLEASE,
Ape1, And Its Implications For The Catalytic Mechanism
gi|13399606|pdb|1HD7|A Chain A, A Second Divalent Metal Ion In The Active Site Of A New
Crystal Form Of Human ApurinicAPYRIDINIMIC ENDONUCLEASE,
Ape1, And Its Implications For The Catalytic Mechanism
gi|354459810|pdb|3U8U|A Chain A, Crystal Structure Of Human ApurinicAPYRIDINIMIC
ENDONUCLEASE, APE1 IN A New Crystal Form
gi|354459811|pdb|3U8U|B Chain B, Crystal Structure Of Human ApurinicAPYRIDINIMIC
ENDONUCLEASE, APE1 IN A New Crystal Form
gi|354459812|pdb|3U8U|C Chain C, Crystal Structure Of Human ApurinicAPYRIDINIMIC
ENDONUCLEASE, APE1 IN A New Crystal Form
gi|354459813|pdb|3U8U|D Chain D, Crystal Structure Of Human ApurinicAPYRIDINIMIC
ENDONUCLEASE, APE1 IN A New Crystal Form
gi|354459814|pdb|3U8U|E Chain E, Crystal Structure Of Human ApurinicAPYRIDINIMIC
ENDONUCLEASE, APE1 IN A New Crystal Form
gi|354459815|pdb|3U8U|F Chain F, Crystal Structure Of Human ApurinicAPYRIDINIMIC
ENDONUCLEASE, APE1 IN A New Crystal Form
gi|19339022|gb|AAL86909.1|AF488551_1 APEX nuclease (multifunctional DNA repair enzyme) [Homo sapiens]
gi|32022|emb|CAA46925.1| AP endonuclease 1 [Homo sapiens]
gi|178747|gb|AAA58372.1| apurinic/apyrimidinic endonuclease [Homo sapiens]
gi|183780|gb|AAA58629.1| apurinic/apyrimidinic endonuclease [Homo sapiens]
gi|254069|gb|AAB22977.1| Ref-1 [Homo sapiens]
gi|13436404|gb|AAH04979.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens]
gi|28071072|emb|CAD61917.1| unnamed protein product [Homo sapiens]
gi|54697126|gb|AAV38935.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens]
gi|60655677|gb|AAX32402.1| APEX nuclease 1 [synthetic construct]
gi|61358645|gb|AAX41600.1| APEX nuclease 1 [synthetic construct]
gi|63100763|gb|AAH95428.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens]
gi|119586867|gb|EAW66463.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a
[Homo sapiens]
gi|119586868|gb|EAW66464.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a
[Homo sapiens]
gi|119586869|gb|EAW66465.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a
[Homo sapiens]
gi|119586870|gb|EAW66466.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a
[Homo sapiens]
gi|119586871|gb|EAW66467.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a
[Homo sapiens]
gi|119586872|gb|EAW66468.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a
[Homo sapiens]
gi|158255636|dbj|BAF83789.1| unnamed protein product [Homo sapiens]
Length = 318
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 258 PNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|6980804|pdb|1DE8|B Chain B, Human ApurinicAPYRIMIDINIC ENDONUCLEASE-1 (Ape1) Bound To
Abasic Dna
gi|6980805|pdb|1DE8|A Chain A, Human ApurinicAPYRIMIDINIC ENDONUCLEASE-1 (Ape1) Bound To
Abasic Dna
gi|6980812|pdb|1DE9|A Chain A, Human Ape1 Endonuclease With Bound Abasic Dna And Mn2+ Ion
gi|6980813|pdb|1DE9|B Chain B, Human Ape1 Endonuclease With Bound Abasic Dna And Mn2+ Ion
Length = 276
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 97 PLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 155
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 156 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 215
Query: 123 RGV-VGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 216 PNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 275
Query: 182 L 182
L
Sbjct: 276 L 276
>gi|299143331|ref|ZP_07036411.1| exodeoxyribonuclease III [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298517816|gb|EFI41555.1| exodeoxyribonuclease III [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 250
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I+P+SV+YG+G+ +HD+EGR++TAEF+ F+ ++CY PNS GL RL YR+ W+ +Y
Sbjct: 71 IEPISVSYGIGMEEHDTEGRVITAEFEKFYFVTCYTPNSKRGLERLEYRMV-WEDVFRNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ +L + KPV+L GDLN AH+EID+ NPA N ++AGFT+EER F L G++DTFR
Sbjct: 130 LNKLRETKPVVLCGDLNVAHEEIDLANPATNHKNAGFTNEERSKF-TELLKSGYIDTFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ Y++W R+ N GWR+DYF+VS+ L D+ I V GSDH P+ L+
Sbjct: 189 FYPDRKDEYSWWSNFAKSRERNIGWRIDYFVVSEELKGNLSDAKIHQSVMGSDHCPVELV 248
Query: 180 LK 181
L+
Sbjct: 249 LE 250
>gi|170051904|ref|XP_001861978.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872934|gb|EDS36317.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 340
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 119/181 (65%), Gaps = 3/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
P +V+YGLG ++ D +GRL+TAE++ F+L+ YVPN+G L L R+ WD Y++
Sbjct: 162 PFNVSYGLGDAEQDEDGRLLTAEYEKFYLVCVYVPNAGRKLVTLPKRM-RWDEKFLQYLR 220
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
+L+ KKPVIL GD+N AH EID+ NP N+++AGFT EER N LS GFVDTFR ++
Sbjct: 221 DLDAKKPVILCGDMNVAHAEIDLANPKTNKKNAGFTQEERDGM-TNLLSHGFVDTFRQRY 279
Query: 123 -RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYF+ S+ LA + DS I P V GSDH PI L+L
Sbjct: 280 PEQKAAYTFWTYMGNARAKNVGWRLDYFIASERLAGRVVDSVIRPGVYGSDHCPITLLLN 339
Query: 182 L 182
L
Sbjct: 340 L 340
>gi|297694584|ref|XP_002824554.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase isoform 1
[Pongo abelii]
gi|395745632|ref|XP_003778302.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Pongo abelii]
gi|395745635|ref|XP_003778303.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Pongo abelii]
gi|146286035|sp|A2T7I6.1|APEX1_PONPY RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
Full=APEX nuclease; Short=APEN; AltName:
Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox
factor-1; Contains: RecName: Full=DNA-(apurinic or
apyrimidinic site) lyase, mitochondrial
gi|124054149|gb|ABM89264.1| APEX1 [Pongo pygmaeus]
Length = 318
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRRFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 258 PNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLTALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|146286032|sp|A1YES6.1|APEX1_GORGO RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
Full=APEX nuclease; Short=APEN; AltName:
Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox
factor-1; Contains: RecName: Full=DNA-(apurinic or
apyrimidinic site) lyase, mitochondrial
gi|120974134|gb|ABM46644.1| APEX1 [Gorilla gorilla]
Length = 318
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRRFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 258 PNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|323490286|ref|ZP_08095501.1| exodeoxyribonuclease III [Planococcus donghaensis MPA1U2]
gi|323395956|gb|EGA88787.1| exodeoxyribonuclease III [Planococcus donghaensis MPA1U2]
Length = 251
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 124/181 (68%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP++V YGLG+ + D+EGR++T EFDS+++++ Y PNS GL RL YR+ W+ ++ S+V
Sbjct: 72 KPVAVQYGLGLEELDTEGRIITLEFDSYYVITVYTPNSQHGLLRLDYRLL-WEEAILSFV 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L+ KPV+L GDLN AH+EID+ NP N++++GFT EER FL GFVDTFR
Sbjct: 131 KTLDNHKPVLLCGDLNVAHEEIDLKNPKANKKNSGFTPEERSKM-TQFLESGFVDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWR+DYFL SQ L + ++ I D+ GSDH P+ L +
Sbjct: 190 YPEEEGHYSWWSYRSNCREKNVGWRIDYFLASQRLVPELQNAKIHKDIWGSDHCPVELQI 249
Query: 181 K 181
+
Sbjct: 250 E 250
>gi|392424943|ref|YP_006465937.1| exodeoxyribonuclease III [Desulfosporosinus acidiphilus SJ4]
gi|391354906|gb|AFM40605.1| exodeoxyribonuclease III [Desulfosporosinus acidiphilus SJ4]
Length = 253
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 114/178 (64%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+ ++G+GI HD EGR++T E+D F+L++ Y PNS L RL YR+T W+ YV
Sbjct: 72 QPLTCSFGMGIPLHDKEGRMITLEYDEFYLINLYAPNSQAELARLEYRLT-WEEDFRRYV 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+ L KPVI GDLN AHQEID+ NP NRR+AGFTDEER F + L GF+DTFR
Sbjct: 131 QTLNSHKPVIFCGDLNVAHQEIDLKNPQANRRNAGFTDEERLKF-SELLESGFIDTFRYL 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ Y++W YR R N GWR+DYF +S+ L D + I V GSDH P+G+
Sbjct: 190 YPEQKDSYSWWSYRFNARVRNAGWRIDYFCMSERLKDSLQSAEIYTSVLGSDHCPVGI 247
>gi|6980832|pdb|1DEW|A Chain A, Crystal Structure Of Human Ape1 Bound To Abasic Dna
gi|6980833|pdb|1DEW|B Chain B, Crystal Structure Of Human Ape1 Bound To Abasic Dna
Length = 279
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 100 PLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 158
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 159 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 218
Query: 123 RGV-VGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 219 PNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 278
Query: 182 L 182
L
Sbjct: 279 L 279
>gi|452823263|gb|EME30275.1| exodeoxyribonuclease III [Galdieria sulphuraria]
Length = 331
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 118/181 (65%), Gaps = 1/181 (0%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YGL H+ EGR++T E++ +FL++ YVPN+G+GLRRL+YRI W+ + Y+
Sbjct: 148 EPLSVLYGLQEEKHNEEGRVITLEYEKYFLVNAYVPNAGEGLRRLNYRIDSWEKDMCQYL 207
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L +KKPVI TGDLN AHQEIDIY P G+ + AGFT +ERQ F + L GFVD FR
Sbjct: 208 CGLNQKKPVIYTGDLNVAHQEIDIYQPKGHEKHAGFTPQERQKF-TDLLQCGFVDAFRYL 266
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ +TYW R ++ N GWRLDYF+ S+ L + + ++ SDH P+ L L
Sbjct: 267 YPHRQSFTYWSKRAKAKERNHGWRLDYFVTSERLVPCILECEMFENIYISDHCPLMLHLD 326
Query: 182 L 182
+
Sbjct: 327 I 327
>gi|342218104|ref|ZP_08710730.1| exodeoxyribonuclease III [Megasphaera sp. UPII 135-E]
gi|341590909|gb|EGS34130.1| exodeoxyribonuclease III [Megasphaera sp. UPII 135-E]
Length = 249
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL VTYG+GI HD EGRL+T E+ ++++CY PNS + L RL YR+ +W+ Y+
Sbjct: 72 EPLQVTYGMGIDAHDHEGRLITLEYPDRYVVTCYTPNSQNELARLPYRM-QWEDDCRHYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+++K VI GDLN AH+EID+ NP NR++AGF+DEER+ N L+ GF DT+R
Sbjct: 131 SQLKEQKSVIFCGDLNVAHEEIDLKNPKNNRKNAGFSDEEREKM-TNLLNSGFTDTWRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W YR RK N GWR+DYF+ S L +++I D+ GSDH P+GLIL
Sbjct: 190 YPDTANVYSWWSYRFNARKNNAGWRIDYFITSDDLNSCLKEAHIYTDIMGSDHCPVGLIL 249
>gi|291403439|ref|XP_002718079.1| PREDICTED: APEX nuclease 1 [Oryctolagus cuniculus]
Length = 318
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFD+F L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEFDAFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLTDSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 258 PDTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|309775417|ref|ZP_07670420.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 3_1_53]
gi|308916806|gb|EFP62543.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 3_1_53]
Length = 254
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 121/180 (67%), Gaps = 7/180 (3%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+ V+YGLGI +HD EGR++T E++ F+L+ Y PNS DGL RL YR+ EW+ + +Y+
Sbjct: 72 EPIHVSYGLGIEEHDHEGRVITCEYEDFYLVCVYTPNSKDGLLRLDYRM-EWEDAFRTYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFR-- 119
+L + K V++ GDLN AH+EID+ NP NRR+AGFTDEER L GF+D++R
Sbjct: 131 HKLNETKSVLVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERNKMSV-LLDSGFIDSYRYL 189
Query: 120 -AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ GV Y++W YR R+ N GWR+DYFLVS+ D ++ I D+ GSDH P+ L
Sbjct: 190 YPEQEGV--YSWWSYRFKAREKNAGWRIDYFLVSEDAKDGIREAKIHTDIYGSDHCPVSL 247
>gi|431779197|ref|ZP_19567393.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E4389]
gi|430642462|gb|ELB78239.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E4389]
Length = 250
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 124/182 (68%), Gaps = 4/182 (2%)
Query: 2 KP-LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
KP L+ TYG+GI HD+EGRL+T E+ FFL++CY PNS L+RL YR+ EW+ + +Y
Sbjct: 71 KPALNATYGMGIDIHDTEGRLITLEYSDFFLVTCYTPNSQSELKRLDYRL-EWEETFYNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++ L+K+KPVI+ GDLN AHQ+ID+ N N+++AGFT EER + + L GF+DTFR
Sbjct: 130 LENLKKQKPVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAAL-SRLLDNGFIDTFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G Y++W YR RK N GWR+DYFL S+ L D+ I D+ GSDH P+ L
Sbjct: 189 FYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLEPGLADAKIHTDIMGSDHCPVELD 248
Query: 180 LK 181
LK
Sbjct: 249 LK 250
>gi|257881925|ref|ZP_05661578.1| AP endonuclease [Enterococcus faecium 1,231,502]
gi|257890085|ref|ZP_05669738.1| AP endonuclease [Enterococcus faecium 1,231,410]
gi|260558703|ref|ZP_05830892.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
[Enterococcus faecium C68]
gi|293563951|ref|ZP_06678361.1| exodeoxyribonuclease III [Enterococcus faecium E1162]
gi|294617705|ref|ZP_06697329.1| exodeoxyribonuclease III [Enterococcus faecium E1679]
gi|294623736|ref|ZP_06702567.1| exodeoxyribonuclease III [Enterococcus faecium U0317]
gi|383327975|ref|YP_005353859.1| exodeoxyribonuclease III [Enterococcus faecium Aus0004]
gi|415888406|ref|ZP_11549116.1| exodeoxyribonuclease III [Enterococcus faecium E4453]
gi|427396653|ref|ZP_18889412.1| exodeoxyribonuclease III (xth) [Enterococcus durans FB129-CNAB-4]
gi|430831423|ref|ZP_19449474.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E0333]
gi|430846773|ref|ZP_19464627.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1133]
gi|430856040|ref|ZP_19473744.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1392]
gi|431535444|ref|ZP_19517290.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1731]
gi|431638743|ref|ZP_19523370.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1904]
gi|431747991|ref|ZP_19536755.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E2297]
gi|431753983|ref|ZP_19542648.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E2883]
gi|431769960|ref|ZP_19558364.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1644]
gi|431774095|ref|ZP_19562408.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E2369]
gi|431776933|ref|ZP_19565190.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E2560]
gi|431781241|ref|ZP_19569389.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E6012]
gi|431784869|ref|ZP_19572905.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E6045]
gi|257817583|gb|EEV44911.1| AP endonuclease [Enterococcus faecium 1,231,502]
gi|257826445|gb|EEV53071.1| AP endonuclease [Enterococcus faecium 1,231,410]
gi|260075162|gb|EEW63475.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
[Enterococcus faecium C68]
gi|291596042|gb|EFF27311.1| exodeoxyribonuclease III [Enterococcus faecium E1679]
gi|291596861|gb|EFF28081.1| exodeoxyribonuclease III [Enterococcus faecium U0317]
gi|291604080|gb|EFF33604.1| exodeoxyribonuclease III [Enterococcus faecium E1162]
gi|364094896|gb|EHM37011.1| exodeoxyribonuclease III [Enterococcus faecium E4453]
gi|378937669|gb|AFC62741.1| exodeoxyribonuclease III [Enterococcus faecium Aus0004]
gi|425723323|gb|EKU86214.1| exodeoxyribonuclease III (xth) [Enterococcus durans FB129-CNAB-4]
gi|430481306|gb|ELA58462.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E0333]
gi|430538327|gb|ELA78619.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1133]
gi|430545329|gb|ELA85303.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1392]
gi|430595015|gb|ELB32963.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1731]
gi|430602222|gb|ELB39801.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1904]
gi|430614867|gb|ELB51838.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E2297]
gi|430619906|gb|ELB56709.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E2883]
gi|430634646|gb|ELB70761.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E2369]
gi|430636029|gb|ELB72104.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1644]
gi|430639874|gb|ELB75728.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E2560]
gi|430648707|gb|ELB84107.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E6045]
gi|430649602|gb|ELB84970.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E6012]
Length = 250
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 124/182 (68%), Gaps = 4/182 (2%)
Query: 2 KP-LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
KP L+ TYG+GI HD+EGRL+T E+ FFL++CY PNS L+RL YR+ EW+ + +Y
Sbjct: 71 KPALNATYGMGIDIHDTEGRLITLEYSDFFLVTCYTPNSQSELKRLDYRL-EWEEAFYNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++ L+K+KPVI+ GDLN AHQ+ID+ N N+++AGFT EER + + L GF+DTFR
Sbjct: 130 LENLKKQKPVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAAL-SRLLDNGFIDTFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G Y++W YR RK N GWR+DYFL S+ L D+ I D+ GSDH P+ L
Sbjct: 189 FYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLEPGLADAKIHTDIMGSDHCPVELD 248
Query: 180 LK 181
LK
Sbjct: 249 LK 250
>gi|118138505|pdb|2ISI|A Chain A, Crystal Structure Of Ape1 From Homo Sapiens In A New
Crystal Form Complexed With A Ligand
gi|118138506|pdb|2ISI|B Chain B, Crystal Structure Of Ape1 From Homo Sapiens In A New
Crystal Form Complexed With A Ligand
gi|118138507|pdb|2ISI|C Chain C, Crystal Structure Of Ape1 From Homo Sapiens In A New
Crystal Form Complexed With A Ligand
gi|443428279|pdb|4IEM|A Chain A, Human Apurinic/apyrimidinic Endonuclease (ape1) With
Product Dna And Mg2+
gi|443428283|pdb|4IEM|B Chain B, Human Apurinic/apyrimidinic Endonuclease (ape1) With
Product Dna And Mg2+
gi|443428287|pdb|4IEM|C Chain C, Human Apurinic/apyrimidinic Endonuclease (ape1) With
Product Dna And Mg2+
gi|443428291|pdb|4IEM|D Chain D, Human Apurinic/apyrimidinic Endonuclease (ape1) With
Product Dna And Mg2+
Length = 317
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 138 PLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 196
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 197 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 256
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 257 PNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 316
Query: 182 L 182
L
Sbjct: 317 L 317
>gi|417409485|gb|JAA51243.1| Putative exodeoxyribonuclease iii, partial [Desmodus rotundus]
Length = 301
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AE+D+F L++ YVPN+G GL RL YR WD + ++K
Sbjct: 122 PLKVSYGIGEEEHDQEGRVIVAEYDAFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 180
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
+ KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + VD+FR +
Sbjct: 181 GVASHKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLVDSFRHLY 240
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFLVS SL DS I GSDH PI L L
Sbjct: 241 PNTAYAYTFWTYMMNARSKNVGWRLDYFLVSHSLLPALCDSKIRSKALGSDHCPITLYLA 300
Query: 182 L 182
L
Sbjct: 301 L 301
>gi|219478|dbj|BAA14381.1| apurinic/apyrimidinic endonuclease [Homo sapiens]
Length = 318
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 258 PNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|389816348|ref|ZP_10207511.1| exodeoxyribonuclease III [Planococcus antarcticus DSM 14505]
gi|388465341|gb|EIM07660.1| exodeoxyribonuclease III [Planococcus antarcticus DSM 14505]
Length = 251
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLS+ YGLG +HD+EGR++ EFD ++++ Y PNS GL RL YR+ W+ ++ S+V
Sbjct: 72 EPLSIQYGLGSEEHDTEGRMIALEFDGHYVVTVYTPNSQHGLLRLDYRLL-WEEAILSFV 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L+ +KPVIL GDLN AH+EID+ NP N++++GFT +ER FL+ GFVDTFR
Sbjct: 131 KTLDNQKPVILCGDLNVAHEEIDLKNPKANKKNSGFTPDERGKM-TQFLTDGFVDTFRHF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
H G Y++W YR R+ N GWR+DYF+ SQ L + + I DV GSDH P+ L +
Sbjct: 190 HPTETGFYSWWSYRSNCREKNVGWRIDYFIASQKLLPRLKSAKIHADVWGSDHCPVELQI 249
Query: 181 KL 182
L
Sbjct: 250 AL 251
>gi|367462704|gb|ADJ96599.2| DNA repair enzyme APEX-1 [Camelus dromedarius]
Length = 318
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
P+ V+YG+G +HD EGR++ AEFD+F L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PIKVSYGIGEEEHDQEGRVIVAEFDAFVLVTVYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 258 PNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|310659330|ref|YP_003937051.1| exodeoxyribonuclease III [[Clostridium] sticklandii]
gi|308826108|emb|CBH22146.1| exodeoxyribonuclease III [[Clostridium] sticklandii]
Length = 250
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 120/179 (67%), Gaps = 3/179 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP+SV YG+ I HD+EGR++T E+D+F+L++ Y PN+ L RL YR+ +W+ Y
Sbjct: 71 IKPISVAYGIDIEHHDTEGRVITLEYDNFYLVNVYTPNAQPKLARLEYRM-QWEDDFRRY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ +L++KKPVI+ GDLN AH EID+ NP NR++ GF+DEER F N L GF+D+FR
Sbjct: 130 LNDLDEKKPVIVCGDLNVAHNEIDLKNPKSNRKNPGFSDEERGKF-TNLLDSGFIDSFRF 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ YT+W YR R+ N GWR+DYF VS L ++ ++ I D+ GSDH P+ L
Sbjct: 189 FYPDATEMYTWWSYRFNARENNAGWRIDYFCVSNKLKNELKNAEIHMDILGSDHCPVVL 247
>gi|299037|gb|AAB26054.1| APEX nuclease=major apurinic/apyrimidinic endonuclease [human,
Peptide, 317 aa]
Length = 317
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 138 PLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 196
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 197 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 256
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 257 PNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 316
Query: 182 L 182
L
Sbjct: 317 L 317
>gi|158298437|ref|XP_318609.4| AGAP009587-PA [Anopheles gambiae str. PEST]
gi|157013880|gb|EAA14571.4| AGAP009587-PA [Anopheles gambiae str. PEST]
Length = 606
Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats.
Identities = 88/181 (48%), Positives = 116/181 (64%), Gaps = 3/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
P V YGLG + D +GRL+TAE++ F+L+ YVPN+G L L R+ W+ Y++
Sbjct: 428 PFHVAYGLGDEEQDQDGRLLTAEYEKFYLVCVYVPNAGRKLVTLPKRL-RWNEKFHQYLR 486
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
+L+ KKPVIL GD+N AH+EID+ NP N+++AGFT EER+ LS GFVDTFR +
Sbjct: 487 DLDAKKPVILCGDMNVAHEEIDLANPKTNKKNAGFTPEEREGM-TELLSYGFVDTFRKLY 545
Query: 123 RGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
G YT+W Y G R N GWRLDYF+ S+ LA K D+ I V GSDH P+ L L
Sbjct: 546 PDRTGAYTFWTYMGGARAKNVGWRLDYFITSERLAGKVTDNVIRSQVFGSDHCPVTLFLN 605
Query: 182 L 182
+
Sbjct: 606 I 606
>gi|395849480|ref|XP_003797352.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Otolemur
garnettii]
Length = 318
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 114/181 (62%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFD F L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEFDKFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLTSQKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 258 PNTAYAYTFWTYMMNARAKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|225159347|ref|ZP_03725644.1| DNA-(apurinic or apyrimidinic site) lyase [Diplosphaera
colitermitum TAV2]
gi|224802053|gb|EEG20328.1| DNA-(apurinic or apyrimidinic site) lyase [Diplosphaera
colitermitum TAV2]
Length = 259
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 119/180 (66%), Gaps = 2/180 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+ PL+VT G+G +HD+EGR++TAEF F+L++ YVPN+ L RL YR WD +Y
Sbjct: 81 LTPLAVTAGIGRDEHDTEGRVLTAEFPDFYLVNAYVPNAQPELARLPYR-QRWDADFLAY 139
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++ LE +KPV++ GDLN AH+EID+ P N + GF++EER F FL GF+DTFR
Sbjct: 140 LRGLETRKPVVMCGDLNVAHEEIDLARPKENVGNPGFSNEERAGF-REFLRAGFLDTFRE 198
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+G Y++W YR G R N GWR+DYFL S SL + ++I P V GSDH PIGL L
Sbjct: 199 FEKGPGHYSWWSYRAGARGKNVGWRIDYFLASASLRPRLKRAWIEPAVMGSDHCPIGLEL 258
>gi|432328166|ref|YP_007246310.1| exodeoxyribonuclease III [Aciduliprofundum sp. MAR08-339]
gi|432134875|gb|AGB04144.1| exodeoxyribonuclease III [Aciduliprofundum sp. MAR08-339]
Length = 257
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 126/182 (69%), Gaps = 2/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I+P SV++G+G DSEGR++TAE++ F+L++ Y PNS GL RL ++I E+D + +Y
Sbjct: 78 IEPESVSFGIGDERFDSEGRVITAEYERFYLVNAYFPNSQHGLTRLDFKI-EFDRKIHAY 136
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ EL + KPV+L GD N AH+EID+ NP N ++AGFT EER ++ FL+ G+VDTFR
Sbjct: 137 LNELRRSKPVVLCGDFNVAHKEIDLANPKQNEKNAGFTPEER-AWMDEFLNDGYVDTFRM 195
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W YR R N GWR+DYF+VS+ L S+I+ DV GSDH+PI +IL
Sbjct: 196 FTKEGGHYTWWTYRFNARARNIGWRVDYFVVSKDLVPHVKKSWIMSDVYGSDHAPIAMIL 255
Query: 181 KL 182
++
Sbjct: 256 EI 257
>gi|213021237|ref|NP_001132943.1| DNA-(apurinic or apyrimidinic site) lyase [Sus scrofa]
gi|210062866|gb|ACJ06403.1| APEX nuclease 1 [Sus scrofa]
Length = 318
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 114/181 (62%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFD+F L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAEFDAFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASHKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 258 PNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|431586490|ref|ZP_19521005.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1861]
gi|430593668|gb|ELB31654.1| exodeoxyribonuclease III (xth) [Enterococcus faecium E1861]
Length = 250
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 124/182 (68%), Gaps = 4/182 (2%)
Query: 2 KP-LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
KP L+ TYG+GI HD+EGRL+T E+ FFL++CY PNS L+RL YR+ EW+ + +Y
Sbjct: 71 KPALNATYGMGIDIHDTEGRLITLEYSDFFLVTCYTPNSQSELKRLDYRL-EWEEAFYNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++ L+K+KPVI+ GDLN AHQ+ID+ N+++AGFT EER + + L GF+DTFR
Sbjct: 130 LENLKKQKPVIVCGDLNVAHQKIDLKKWKTNQKNAGFTPEERAAL-SRLLDNGFIDTFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G Y++W YR RK N GWR+DYFL S+ L + D+ I D+ GSDH P+ L
Sbjct: 189 FYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLEPRLADAKIHTDIMGSDHCPVELD 248
Query: 180 LK 181
LK
Sbjct: 249 LK 250
>gi|153812982|ref|ZP_01965650.1| hypothetical protein RUMOBE_03389 [Ruminococcus obeum ATCC 29174]
gi|149830929|gb|EDM86019.1| exodeoxyribonuclease III [Ruminococcus obeum ATCC 29174]
Length = 252
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 120/182 (65%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV G+GI +HD EGR++T EF F+ ++ Y PNS LRRL YR+ EW+ +Y+
Sbjct: 72 EPISVKNGIGIEEHDKEGRVITLEFKEFYFVTVYTPNSQSELRRLEYRM-EWERDFLAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L++ KPVI GDLN AH+EID+ NP NR++AGFTDEER F L GF+DTFR
Sbjct: 131 LKLQESKPVICCGDLNVAHEEIDLKNPKTNRKNAGFTDEERACF-TKVLESGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWR+DYF+ S SL +K + I ++ GSDH PI L +
Sbjct: 190 YPDKEGIYSWWSYRFKAREKNAGWRIDYFITSPSLKEKLQGAAIHTEIMGSDHCPIELDI 249
Query: 181 KL 182
L
Sbjct: 250 DL 251
>gi|199597303|ref|ZP_03210734.1| Exonuclease III [Lactobacillus rhamnosus HN001]
gi|199591819|gb|EDY99894.1| Exonuclease III [Lactobacillus rhamnosus HN001]
Length = 253
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 115/180 (63%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VTYG+GI +HD+EGR++T E+ F+L++ Y PNSG L+RL YR +WD +Y
Sbjct: 73 KPLNVTYGMGIPEHDTEGRIITLEYTKFYLMTVYTPNSGGELKRLDYR-QQWDRDFLAYT 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL KKP++ GDLN AH+ ID+ N N +AGFTDEER F L+ GF+DTFR
Sbjct: 132 NELAAKKPLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERADFTKQ-LNSGFIDTFRHF 190
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ V Y++W Y R N GWR+DYF+ S + D+ IL + GSDH P+ L+ +
Sbjct: 191 YPDTVTYSWWSYHFHARANNAGWRIDYFVASSAFQPYIQDAKILTQIMGSDHCPVELVTQ 250
>gi|227522924|ref|ZP_03952973.1| exodeoxyribonuclease III [Lactobacillus hilgardii ATCC 8290]
gi|227089953|gb|EEI25265.1| exodeoxyribonuclease III [Lactobacillus hilgardii ATCC 8290]
Length = 252
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 121/179 (67%), Gaps = 3/179 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V+YG+ + D EGR +T E+ +F+L++ YVPNSG L+RL +R+ WD + +Y+
Sbjct: 72 EPLTVSYGIQAPEFDHEGRAITLEYPNFYLVTSYVPNSGAKLKRLDFRMG-WDKAFHAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+ KPVIL GDLN AH EID+ NP N +AGFTDEERQSF L +GF+DTFR
Sbjct: 131 NQLDSHKPVILCGDLNVAHHEIDLKNPQSNHHNAGFTDEERQSF-TKLLDQGFMDTFRHF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ Y++W YR R N GWR+DYF+ S+ LAD DS IL D+ GSDH P+ L+
Sbjct: 190 YPDKEDIYSWWSYRFHSRDRNAGWRIDYFVTSKRLADHISDSKILTDIFGSDHCPVELL 248
>gi|158321340|ref|YP_001513847.1| exodeoxyribonuclease III Xth [Alkaliphilus oremlandii OhILAs]
gi|158141539|gb|ABW19851.1| exodeoxyribonuclease III Xth [Alkaliphilus oremlandii OhILAs]
Length = 252
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 120/182 (65%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV YG+GI +HD EGR++T EF +++++ Y PNS L RL YR+T W+ SY+
Sbjct: 73 EPISVFYGIGIEEHDKEGRVITLEFGDYYMVTVYTPNSQQKLARLDYRMT-WEDCFRSYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L+K+KP+I+ GDLN AH EID+ NP NR++AGF+DEER F FL G++DT+R
Sbjct: 132 NNLDKQKPIIVCGDLNVAHNEIDLKNPKSNRKNAGFSDEERAKF-TEFLGNGYIDTYRYF 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G YT+W Y R N GWR+DYF VS+ L DK + I + GSDH P+ L++
Sbjct: 191 YPDREGAYTWWSYMFNARANNAGWRIDYFCVSERLQDKLVSADIHDHILGSDHCPVELVI 250
Query: 181 KL 182
+
Sbjct: 251 NI 252
>gi|227509865|ref|ZP_03939914.1| exodeoxyribonuclease III [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227190789|gb|EEI70856.1| exodeoxyribonuclease III [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 252
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 121/179 (67%), Gaps = 3/179 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V+YG+ + D EGR +T E+ +F+L++ YVPNSG L+RL +R+ WD + +Y+
Sbjct: 72 EPLTVSYGIQAPEFDHEGRAITLEYPNFYLVTSYVPNSGAKLKRLDFRMG-WDKAFHAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+ KPVIL GDLN AH EID+ NP N +AGFTDEERQSF L +GF+DTFR
Sbjct: 131 NQLDSHKPVILCGDLNVAHHEIDLKNPKSNHHNAGFTDEERQSF-TKLLDQGFMDTFRHF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ Y++W YR R N GWR+DYF+ S+ LAD DS IL D+ GSDH P+ L+
Sbjct: 190 YPDKEDIYSWWSYRFHSRDRNAGWRIDYFVTSKRLADHISDSKILTDIFGSDHCPVELL 248
>gi|291276452|ref|YP_003516224.1| exodeoxyribonuclease [Helicobacter mustelae 12198]
gi|290963646|emb|CBG39478.1| putative exodeoxyribonuclease [Helicobacter mustelae 12198]
Length = 250
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL V Y +GI HD EGR++ AE+ F+L++ Y PNS L RL YR+ +W+ +++
Sbjct: 72 EPLCVEYDMGIEHHDKEGRVICAEYPDFYLINVYTPNSKRELERLEYRM-QWEDDFLNFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K LE+KKP+I+ GDLN AH+EID+ NP NRR+AGFTDEER+ L GF+DTFR
Sbjct: 131 KNLERKKPLIICGDLNVAHKEIDLKNPKTNRRNAGFTDEEREKM-TTLLENGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W Y R+ N GWR+DYFL S+ L + ++ I ++ GSDH P+GL++
Sbjct: 190 YPDLEGAYSWWSYMGRARQNNTGWRIDYFLCSEILQKRLIEAKIYSEILGSDHCPVGLVI 249
>gi|160947302|ref|ZP_02094469.1| hypothetical protein PEPMIC_01235 [Parvimonas micra ATCC 33270]
gi|343520435|ref|ZP_08757404.1| exodeoxyribonuclease III [Parvimonas sp. oral taxon 393 str. F0440]
gi|158446436|gb|EDP23431.1| exodeoxyribonuclease III [Parvimonas micra ATCC 33270]
gi|343397393|gb|EGV09927.1| exodeoxyribonuclease III [Parvimonas sp. oral taxon 393 str. F0440]
Length = 250
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 120/182 (65%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
KPLSV YG+G+ +HD+EGRL+T E+D FFL++CY PNS L RL YR+ W+ + +Y
Sbjct: 71 FKPLSVKYGMGMEEHDNEGRLITLEYDDFFLVTCYTPNSKQELLRLDYRMV-WEDAFRNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ +L K K VI+ GDLN AH+EID+ NP NR++AGFTDEER+ L GF DTFR
Sbjct: 130 LLDLNKTKSVIVCGDLNVAHKEIDLKNPKTNRKNAGFTDEEREKMSI-LLDSGFTDTFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ Y++W Y R+ N GWR+DYFL S+ + D+ D+ I + GSDH P+ L
Sbjct: 189 FYPDKENEYSWWSYFGKSRERNTGWRIDYFLTSKDMDDRLVDAQIHQSILGSDHCPVYLE 248
Query: 180 LK 181
+K
Sbjct: 249 IK 250
>gi|373465510|ref|ZP_09556970.1| exodeoxyribonuclease III [Lactobacillus kisonensis F0435]
gi|371760225|gb|EHO48917.1| exodeoxyribonuclease III [Lactobacillus kisonensis F0435]
Length = 256
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 120/178 (67%), Gaps = 3/178 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL+V YG+ + D EGR +T E+ +F+L++ YVPNSG L+RL +R+ WD + Y+
Sbjct: 77 PLNVYYGIQSDEFDHEGRAITLEYPTFYLVTSYVPNSGAKLKRLDFRMG-WDVAFQQYLA 135
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L K+KPVIL GDLN AH+ ID+ NP N +AGFTDEER SF ++FL +GF+DTFR +
Sbjct: 136 NLNKEKPVILCGDLNVAHKTIDLKNPQTNHHNAGFTDEERNSF-SHFLDQGFMDTFRHFY 194
Query: 123 RGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ Y++W YR R N GWR+DYF+ S LAD DS IL DV GSDH P+ L+
Sbjct: 195 PDMTDIYSWWSYRFHARDRNAGWRIDYFVASNRLADHISDSKILTDVFGSDHCPVELL 252
>gi|178743|gb|AAA58371.1| apurinic endonuclease [Homo sapiens]
Length = 318
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 114/181 (62%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I SDH PI L L
Sbjct: 258 PNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALASDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|403374064|gb|EJY86966.1| Exonuclease III [Oxytricha trifallax]
Length = 628
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 88/184 (47%), Positives = 121/184 (65%), Gaps = 3/184 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP+ VT+ +GI +HD EGR++TAEF F L++ YVPNSGD LRRLSYR EWD + Y
Sbjct: 153 IKPIKVTFDIGIEEHDQEGRVITAEFSKFVLVAVYVPNSGDDLRRLSYRTQEWDKAFFDY 212
Query: 61 V--KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTF 118
+ +E KP+ILTGDLN A E+D+++ G + A +T EER+SF + F+++G++DTF
Sbjct: 213 LDRTRIETNKPLILTGDLNVARNELDVFDTKGKDKVACYTPEERKSFES-FINRGYIDTF 271
Query: 119 RAQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
R + YTY+ R + TN+GWR+DYF+V Q + D I D GSDH P+ L
Sbjct: 272 RHLYPDKREYTYFSARFNNKVTNKGWRIDYFVVHQDDINMVTDVTIHKDYNGSDHVPVCL 331
Query: 179 ILKL 182
L L
Sbjct: 332 HLDL 335
>gi|317056539|ref|YP_004105006.1| exodeoxyribonuclease III Xth [Ruminococcus albus 7]
gi|315448808|gb|ADU22372.1| exodeoxyribonuclease III Xth [Ruminococcus albus 7]
Length = 250
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 122/182 (67%), Gaps = 4/182 (2%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL V +GL H EGR++T EF+ ++ + CYVPN+ + L+R+ YR+ E++ + +Y+
Sbjct: 72 EPLEVKFGLN-GTHTDEGRVITCEFEDYYFVCCYVPNAQNELKRIDYRM-EFEDDMRAYL 129
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+K KPV+ GDLN AH+EID+ NP N +AGF+DEER F L GF DTFR
Sbjct: 130 SQLDKTKPVVYCGDLNVAHEEIDLKNPKSNAGNAGFSDEERGKF-TELLGAGFADTFRRL 188
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS+ L DK DS IL D+TGSDH P+ L +
Sbjct: 189 YPDKAGAYSWWSYRFNARKNNAGWRIDYFVVSERLMDKVKDSKILSDITGSDHCPVELDI 248
Query: 181 KL 182
+L
Sbjct: 249 EL 250
>gi|169823955|ref|YP_001691566.1| exodeoxyribonuclease III [Finegoldia magna ATCC 29328]
gi|417925665|ref|ZP_12569084.1| exodeoxyribonuclease III [Finegoldia magna SY403409CC001050417]
gi|167830760|dbj|BAG07676.1| exodeoxyribonuclease III [Finegoldia magna ATCC 29328]
gi|341591291|gb|EGS34499.1| exodeoxyribonuclease III [Finegoldia magna SY403409CC001050417]
Length = 253
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 116/179 (64%), Gaps = 3/179 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++P+ V+YG+GI +HD+EGR++T E++ FFL++ Y PNS L RL YR+ W+ +Y
Sbjct: 73 VEPIGVSYGIGIDEHDTEGRVITCEYEDFFLVNVYTPNSKQKLERLDYRMV-WEDEFHNY 131
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ L +KPVI+ GDLN AH EID+ NP NRRSAGFTDEER L+ G++DTFR
Sbjct: 132 LNILRDRKPVIVCGDLNVAHNEIDLKNPQSNRRSAGFTDEERNKMSL-LLNDGYIDTFRY 190
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ Y+YW Y R+ N GWR+DYFLVS L D D+ I + GSDH P+ L
Sbjct: 191 FYPDKTDEYSYWSYFAKARERNAGWRIDYFLVSDDLKDNLVDAKIHQSIMGSDHCPVEL 249
>gi|261880757|ref|ZP_06007184.1| exodeoxyribonuclease III [Prevotella bergensis DSM 17361]
gi|270332533|gb|EFA43319.1| exodeoxyribonuclease III [Prevotella bergensis DSM 17361]
Length = 267
Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 123/187 (65%), Gaps = 8/187 (4%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGL------RRLSYRITEWDP 55
+P++V G+GI +HD+EGR++T E+ F+L++ Y PNS + L +RL YR+ +W+
Sbjct: 83 EPMNVACGMGIEEHDNEGRVITLEYPEFYLVNVYTPNSQESLPGEVKPKRLGYRM-KWEE 141
Query: 56 SLSSYVKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFV 115
+Y+K L + KPVI+ GDLN AHQEIDI N NR +AGFTDEER+ L GF+
Sbjct: 142 DFRAYIKRLNETKPVIVCGDLNVAHQEIDIKNAKTNRNNAGFTDEEREKMTI-LLDNGFI 200
Query: 116 DTFRAQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSP 175
DTFR + V Y++W YR R+ N GWR+DYFLVS+ L ++ D+ I ++ GSDH P
Sbjct: 201 DTFRTMYPEQVIYSWWSYRFRARERNTGWRIDYFLVSERLRNQIVDARIHTEIYGSDHCP 260
Query: 176 IGLILKL 182
+ L L L
Sbjct: 261 VELELNL 267
>gi|227512799|ref|ZP_03942848.1| exodeoxyribonuclease III [Lactobacillus buchneri ATCC 11577]
gi|227083999|gb|EEI19311.1| exodeoxyribonuclease III [Lactobacillus buchneri ATCC 11577]
Length = 252
Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 121/179 (67%), Gaps = 3/179 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V+YG+ + D EGR +T E+ +F+L++ YVPNSG L+RL +R+ WD + +Y+
Sbjct: 72 EPLTVSYGIQAPEFDHEGRAITLEYPNFYLVTSYVPNSGAKLKRLDFRMG-WDKAFHAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+ KPVIL GDLN AH EID+ NP N +AGFTDEERQSF L +GF+DTFR
Sbjct: 131 NQLDSHKPVILCGDLNVAHYEIDLKNPQSNHHNAGFTDEERQSF-TKLLDQGFMDTFRHF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ Y++W YR R N GWR+DYF+ S+ LAD DS IL D+ GSDH P+ L+
Sbjct: 190 YPDKEDIYSWWSYRFHSRDRNAGWRIDYFVTSKRLADHISDSKILTDIFGSDHCPVELL 248
>gi|332800472|ref|YP_004461971.1| exodeoxyribonuclease III Xth [Tepidanaerobacter acetatoxydans Re1]
gi|438003872|ref|YP_007273615.1| Exodeoxyribonuclease III [Tepidanaerobacter acetatoxydans Re1]
gi|332698207|gb|AEE92664.1| exodeoxyribonuclease III Xth [Tepidanaerobacter acetatoxydans Re1]
gi|432180666|emb|CCP27639.1| Exodeoxyribonuclease III [Tepidanaerobacter acetatoxydans Re1]
Length = 251
Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 117/179 (65%), Gaps = 3/179 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I PLSV YG+ I +HD+EGR++T EF++F+ ++ YVPNS GL RL YR+ +W+ Y
Sbjct: 71 ISPLSVAYGIDIEEHDAEGRVITLEFENFYFVNVYVPNSQRGLTRLDYRM-KWEDDFREY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ +L+ KPVI GD N AHQEID+ NP NR++AGFTDEERQ L+ GF+D FR
Sbjct: 130 LIKLDGIKPVICCGDKNVAHQEIDLKNPKSNRKNAGFTDEERQKM-TELLNSGFIDAFRY 188
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ YT+W Y R+ N GWR+DYF+VS+ L DK D I V GSDH P+ L
Sbjct: 189 LYPDKKDAYTWWSYMFKAREKNVGWRIDYFIVSERLKDKIKDVEIHSHVMGSDHCPVLL 247
>gi|403336088|gb|EJY67231.1| Exonuclease III [Oxytricha trifallax]
Length = 640
Score = 182 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 88/184 (47%), Positives = 121/184 (65%), Gaps = 3/184 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP+ VT+ +GI +HD EGR++TAEF F L++ YVPNSGD LRRLSYR EWD + Y
Sbjct: 153 IKPIKVTFDIGIEEHDQEGRVITAEFSKFVLVAVYVPNSGDDLRRLSYRTQEWDKAFFDY 212
Query: 61 V--KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTF 118
+ +E KP+ILTGDLN A E+D+++ G + A +T EER+SF +F+++G++DTF
Sbjct: 213 LDRTRIETNKPLILTGDLNVARNELDVFDTKGKDKVACYTPEERKSF-ESFINRGYIDTF 271
Query: 119 RAQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
R + YTY+ R + TN+GWR+DYF+V Q + D I D GSDH P+ L
Sbjct: 272 RHLYPDKREYTYFSARFNNKVTNKGWRIDYFVVHQDDINMVTDVTIHKDYNGSDHVPVCL 331
Query: 179 ILKL 182
L L
Sbjct: 332 HLDL 335
>gi|403335404|gb|EJY66875.1| Exonuclease III [Oxytricha trifallax]
gi|403370677|gb|EJY85206.1| Exonuclease III [Oxytricha trifallax]
Length = 583
Score = 182 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 88/184 (47%), Positives = 121/184 (65%), Gaps = 3/184 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP+ VT+ +GI +HD EGR++TAEF F L++ YVPNSGD LRRLSYR EWD + Y
Sbjct: 153 IKPIKVTFDIGIEEHDQEGRVITAEFSKFVLVAVYVPNSGDDLRRLSYRTQEWDKAFFDY 212
Query: 61 V--KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTF 118
+ +E KP+ILTGDLN A E+D+++ G + A +T EER+SF +F+++G++DTF
Sbjct: 213 LDRTRIETNKPLILTGDLNVARNELDVFDTKGKDKVACYTPEERKSF-ESFINRGYIDTF 271
Query: 119 RAQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
R + YTY+ R + TN+GWR+DYF+V Q + D I D GSDH P+ L
Sbjct: 272 RHLYPDKREYTYFSARFNNKVTNKGWRIDYFVVHQDDINMVTDVTIHKDYNGSDHVPVCL 331
Query: 179 ILKL 182
L L
Sbjct: 332 HLDL 335
>gi|268608445|ref|ZP_06142172.1| exodeoxyribonuclease [Ruminococcus flavefaciens FD-1]
Length = 248
Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 124/180 (68%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVT+G+ +H EGR++T E++ F+ + CYVPN+ + L+R+ YR+ E++ ++ Y+
Sbjct: 72 EPLSVTFGIN-GEHTDEGRVITCEYEDFYFVGCYVPNAQNELKRIDYRM-EFEDAMRGYL 129
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL+KKKPVI GDLN AH EID+ NP N +AGF+DEER F L+ GF D++R+
Sbjct: 130 SELDKKKPVIYCGDLNVAHNEIDLKNPKSNVGNAGFSDEERGKF-TELLAAGFSDSYRSL 188
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ + Y++W YR R+ N GWR+DYF+VS + DS IL DVTGSDH P+ LI++
Sbjct: 189 YPEKIEYSWWSYRFKAREKNIGWRIDYFVVSDRFMPRVKDSQILTDVTGSDHCPVQLIIE 248
>gi|403365259|gb|EJY82409.1| Exonuclease III [Oxytricha trifallax]
Length = 645
Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats.
Identities = 88/184 (47%), Positives = 121/184 (65%), Gaps = 3/184 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP+ VT+ +GI +HD EGR++TAEF F L++ YVPNSGD LRRLSYR EWD + Y
Sbjct: 153 IKPIKVTFDIGIEEHDQEGRVITAEFSKFVLVAVYVPNSGDDLRRLSYRTQEWDKAFFDY 212
Query: 61 V--KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTF 118
+ +E KP+ILTGDLN A E+D+++ G + A +T EER+SF +F+++G++DTF
Sbjct: 213 LDRTRIETNKPLILTGDLNVARNELDVFDTKGKDKVACYTPEERKSF-ESFINRGYIDTF 271
Query: 119 RAQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
R + YTY+ R + TN+GWR+DYF+V Q + D I D GSDH P+ L
Sbjct: 272 RHLYPDKREYTYFSARFNNKVTNKGWRIDYFVVHQDDINMVTDVTIHKDYNGSDHVPVCL 331
Query: 179 ILKL 182
L L
Sbjct: 332 HLDL 335
>gi|303232423|ref|ZP_07319115.1| exodeoxyribonuclease III [Atopobium vaginae PB189-T1-4]
gi|302481507|gb|EFL44575.1| exodeoxyribonuclease III [Atopobium vaginae PB189-T1-4]
Length = 259
Score = 181 bits (460), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL + +G S D+EGR+ EF+ F+ ++ Y PNS + L RL R+ EWD + S++
Sbjct: 81 PLQTIHTIGCSAADNEGRVCALEFNDFWFVNVYTPNSKNELARLDERM-EWDEAYRSFLH 139
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L+ KKPVI GD NCAH+EID+ NPA N ++AGF+DEER SF L+ GF DTFRA H
Sbjct: 140 TLDAKKPVITCGDFNCAHEEIDLKNPATNHQNAGFSDEERASF-TKLLNTGFTDTFRAAH 198
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ Y++W YR R+ N GWR+DYFLVS + ++ D+ I DV GSDH P+GL +
Sbjct: 199 PTLTDAYSWWSYRMRSRERNAGWRIDYFLVSDRIKNQVSDARIHADVYGSDHCPVGLTIT 258
Query: 182 L 182
L
Sbjct: 259 L 259
>gi|304439168|ref|ZP_07399086.1| exodeoxyribonuclease III [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372300|gb|EFM25888.1| exodeoxyribonuclease III [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 254
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 120/182 (65%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+GI +HD EGR++T E+ ++ ++CY PNS GL RL YR+ EW+ + Y+
Sbjct: 75 EPLSVSYGIGIEEHDKEGRVITLEYPEYYFITCYTPNSQRGLARLDYRM-EWEEAFLEYL 133
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L++ KPV+L GDLN AH EID+ NP NR++AGF+DEER F L G+ DTFR
Sbjct: 134 NRLDEVKPVVLCGDLNVAHNEIDLKNPESNRKNAGFSDEERDKF-TKLLEAGYTDTFRYL 192
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W Y R N GWR+DYF+VS+ L DK ++ I ++ GSDH P+ + L
Sbjct: 193 YPDKEDEYSWWSYFRQARDRNIGWRIDYFVVSKVLEDKIVEASIHQNIMGSDHCPVSVEL 252
Query: 181 KL 182
L
Sbjct: 253 NL 254
>gi|32024|emb|CAA42437.1| HAP1 [Homo sapiens]
Length = 318
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 114/181 (62%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+EID+ NP GN+++AGFT +E Q FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQEAQGFGELLQAVPLADSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 258 PNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|307212268|gb|EFN88076.1| Recombination repair protein 1 [Harpegnathos saltator]
Length = 327
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 119/182 (65%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP+SV YGL S+ DSEGR++ AEF FF+++ YVPN+G L L R+ EW+ Y+
Sbjct: 148 KPVSVKYGLNNSNFDSEGRIIAAEFPEFFMVNVYVPNAGQKLVTLPKRL-EWNKIFKKYI 206
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+EL++KKPVI+ GD+N AHQEID+ NP N ++AGFT EER +FL+ GF+DTFR
Sbjct: 207 EELDQKKPVIICGDMNVAHQEIDLKNPKTNTKNAGFTKEERDGM-TDFLAAGFIDTFRLL 265
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G YT+W Y R + GWRLDYFL S+ + +K D+ I V GSDH P+ L
Sbjct: 266 YPDKEGAYTFWSYFANARNKDIGWRLDYFLASERIKNKICDNIIRKQVYGSDHCPVILYA 325
Query: 181 KL 182
L
Sbjct: 326 NL 327
>gi|392531481|ref|ZP_10278618.1| exodeoxyribonuclease III [Carnobacterium maltaromaticum ATCC 35586]
Length = 251
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P V YGLG +HD EGR++T + +++++CY PNS + L+RL+YR+T W+ +Y+
Sbjct: 72 EPDEVFYGLGKEEHDQEGRVITLSYPDYYVVTCYTPNSQNELKRLNYRMT-WEEDFLAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+ +KPVI+ GDLN AH+ IDI N NR++AGFTDEER F FL G++DTFR
Sbjct: 131 NQLDAEKPVIVCGDLNVAHENIDIKNWKTNRKNAGFTDEERGKF-TEFLENGYIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR R N GWR+DYF+VS+ L +K + IL +V GSDH P+ L +
Sbjct: 190 YPELEGAYSWWSYRFNARANNAGWRIDYFIVSERLQEKLVSAAILNEVVGSDHCPVELQI 249
Query: 181 KL 182
L
Sbjct: 250 NL 251
>gi|229366136|gb|ACQ58048.1| DNA-apurinic or apyrimidinic site lyase [Anoplopoma fimbria]
Length = 310
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 118/178 (66%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL VTYG+G +HD EGR++TAEF +F+L++ YVPNS GL RL YR T WD +Y+
Sbjct: 131 EPLKVTYGIGKEEHDKEGRVITAEFPNFYLVTTYVPNSSKGLVRLDYRKT-WDEDFRAYL 189
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL+ +KP++L GDLN AHQEID+ NP GN+++AGFT EER+ FG L GF D+FR
Sbjct: 190 SELDMQKPLVLCGDLNVAHQEIDLKNPKGNKKNAGFTVEEREGFG-QLLGSGFADSFREL 248
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L
Sbjct: 249 YPEQANAYTFWTYMMNSRGKNVGWRLDYFLLSSSLLPGLCDSKIRSKALGSDHCPITL 306
>gi|224543695|ref|ZP_03684234.1| hypothetical protein CATMIT_02905 [Catenibacterium mitsuokai DSM
15897]
gi|224523348|gb|EEF92453.1| exodeoxyribonuclease III [Catenibacterium mitsuokai DSM 15897]
Length = 248
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 122/182 (67%), Gaps = 5/182 (2%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLSV+YG+GI ++D EGR++T EF+ ++ + CY PNS L R+ YR+ EW+ + +Y
Sbjct: 71 MKPLSVSYGIGIEEYDQEGRVITLEFEDYYFVPCYTPNSKKELARIDYRM-EWEDAFLAY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ L KPVIL GDLN AH EID+ NP+ N +AGF+D+ER LS G++DTFR
Sbjct: 130 LDAL--NKPVILCGDLNVAHHEIDLKNPSSNHHNAGFSDQERSKM-TELLSHGYIDTFRY 186
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ YT+W Y R+ N GWR+DYF+VS+SL ++ +S I D+ GSDH PIGL
Sbjct: 187 LYPDKKDAYTWWSYMFKSRERNAGWRIDYFIVSESLKERIKESLIYSDILGSDHCPIGLE 246
Query: 180 LK 181
++
Sbjct: 247 ME 248
>gi|345314093|ref|XP_001516262.2| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like
[Ornithorhynchus anatinus]
Length = 320
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 117/182 (64%), Gaps = 2/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+G +HD EGR++ AEF++F L++ YVPNSG GL RL YR WD + ++
Sbjct: 140 RPLSVSYGIGEEEHDQEGRVIVAEFEAFVLVTVYVPNSGRGLVRLDYR-QRWDQAFRRFL 198
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+ +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR
Sbjct: 199 QAQAARKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLGTVDLADSFRHL 258
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWRLDYFL+S++L DS I GSDH PI L L
Sbjct: 259 YPAAAYAYTFWTYMMNARSKNVGWRLDYFLLSRALLPSLCDSKIRSAALGSDHCPITLYL 318
Query: 181 KL 182
L
Sbjct: 319 AL 320
>gi|424779917|ref|ZP_18206803.1| Exodeoxyribonuclease III [Catellicoccus marimammalium M35/04/3]
gi|422843456|gb|EKU27893.1| Exodeoxyribonuclease III [Catellicoccus marimammalium M35/04/3]
Length = 253
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 118/178 (66%), Gaps = 3/178 (1%)
Query: 4 LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKE 63
LSV YGLGI + D EGRL+T E+ F+L++CY PN+ L+R+ +R+ +W+ + Y+ +
Sbjct: 74 LSVQYGLGIEELDHEGRLITLEYPEFYLVTCYTPNAQSELKRIDFRL-QWEAAFREYLHQ 132
Query: 64 LEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHR 123
L++KKPVI+ GDLN AHQ ID+ N NR AGF+DEER +F L+ GF DTFR +
Sbjct: 133 LDEKKPVIICGDLNVAHQNIDLKNWRPNRGKAGFSDEERNAF-TELLNTGFTDTFRYLYP 191
Query: 124 GVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
G Y++W YR R+ N GWR+DYFLVS L ++ I D+ GSDH P+GL L
Sbjct: 192 ETTGVYSWWSYRFHARENNAGWRIDYFLVSNRLQKDIQEACIYTDILGSDHCPVGLTL 249
>gi|414085431|ref|YP_006994142.1| exodeoxyribonuclease III [Carnobacterium maltaromaticum LMA28]
gi|412999018|emb|CCO12827.1| exodeoxyribonuclease III [Carnobacterium maltaromaticum LMA28]
Length = 251
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P V YGLG +HD EGR++T + +++++CY PNS + L+RL YR+T W+ +Y+
Sbjct: 72 EPDDVFYGLGKEEHDQEGRVITLSYPDYYVVTCYTPNSQNELKRLDYRMT-WEEDFLAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+ +KPVI+ GDLN AH+ IDI N NR++AGFTDEER F FL G++DTFR
Sbjct: 131 NQLDAEKPVIVCGDLNVAHENIDIKNWKTNRKNAGFTDEERGKF-TEFLENGYIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W YR R N GWR+DYF+VS+ L +K + IL +V GSDH P+ L +
Sbjct: 190 YPELEGAYSWWSYRFNARANNAGWRIDYFIVSERLQEKLVSAAILNEVVGSDHCPVELQI 249
Query: 181 KL 182
L
Sbjct: 250 NL 251
>gi|406837825|ref|ZP_11097419.1| exodeoxyribonuclease, partial [Lactobacillus vini DSM 20605]
Length = 181
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/179 (46%), Positives = 124/179 (69%), Gaps = 3/179 (1%)
Query: 4 LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKE 63
+ VT G+GI + D EGR++T E++ F+L+ CY PNS L+RL +R+ +W+ + +Y+K+
Sbjct: 4 IKVTNGIGIDEFDHEGRVITLEYEQFYLVDCYTPNSQQKLKRLDFRL-KWELAFQTYLKK 62
Query: 64 LEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHR 123
L++ KPVIL GDLN AHQ+ID+ N NR +AGF+D+ERQ+ + L KGF+D+FR H
Sbjct: 63 LDQTKPVILCGDLNVAHQKIDLKNWKTNRHNAGFSDQERQAM-TSLLDKGFIDSFRFLHP 121
Query: 124 GVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
G Y++W YR R+ N GWR+DYF+VS L ++ + IL ++ GSDH P+ L LK
Sbjct: 122 ETTGIYSWWSYRFHARENNAGWRIDYFIVSDRLKNRILKADILTNIYGSDHCPVELELK 180
>gi|354558981|ref|ZP_08978234.1| exodeoxyribonuclease III [Desulfitobacterium metallireducens DSM
15288]
gi|353545305|gb|EHC14757.1| exodeoxyribonuclease III [Desulfitobacterium metallireducens DSM
15288]
Length = 251
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 115/178 (64%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL++ YG+GI +HD EGR++T EF+ F++++ Y PNS L RL YR+ +W+ Y+
Sbjct: 72 EPLNIRYGIGIEEHDQEGRVITLEFEKFYMVTVYTPNSQRELARLEYRM-KWEDDFLHYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
++LE+ KPVI GDLN AH+EID+ NP N+ +AGF+ EER + +GF DTFR
Sbjct: 131 RDLEQLKPVIFCGDLNVAHKEIDLKNPKANKNNAGFSAEERGKL-TRVMDQGFTDTFRYF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ YT+W Y R N GWR+DYF VS L D+ D+ I DV GSDH PIGL
Sbjct: 190 YPEQTEAYTWWSYMFNARANNAGWRIDYFCVSAELKDQLKDAVIYNDVLGSDHCPIGL 247
>gi|373858337|ref|ZP_09601074.1| exodeoxyribonuclease III Xth [Bacillus sp. 1NLA3E]
gi|372451804|gb|EHP25278.1| exodeoxyribonuclease III Xth [Bacillus sp. 1NLA3E]
Length = 252
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 122/184 (66%), Gaps = 7/184 (3%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSV YG+G ++HDSEGR +T EF+ F+L++ Y PNS L RL+YR+ W+ L ++
Sbjct: 72 KPLSVQYGIGTTEHDSEGRAITLEFEEFYLVNIYTPNSQRDLARLNYRVA-WEDYLREFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFR-- 119
+EL+ KKPVIL GD+N AH EID+ NP N +++GFT EER L+ GFVDTFR
Sbjct: 131 QELDTKKPVILCGDMNVAHHEIDLKNPKSNMKNSGFTPEERGKM-TELLNNGFVDTFRHL 189
Query: 120 -AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ V YT+W Y + R+ N GWR+DYFLVS+ L + D+ + D+ GSDH P+ L
Sbjct: 190 NPEKENV--YTWWSYMNKVRERNIGWRIDYFLVSERLRESIIDTQVHSDIMGSDHCPVLL 247
Query: 179 ILKL 182
+ L
Sbjct: 248 EIDL 251
>gi|15893514|ref|NP_346863.1| exodeoxyribonuclease (exoA) [Clostridium acetobutylicum ATCC 824]
gi|337735433|ref|YP_004634880.1| exodeoxyribonuclease ExoA [Clostridium acetobutylicum DSM 1731]
gi|384456943|ref|YP_005669363.1| Exodeoxyribonuclease (exoA) [Clostridium acetobutylicum EA 2018]
gi|15023055|gb|AAK78203.1|AE007535_5 Exodeoxyribonuclease (exoA) [Clostridium acetobutylicum ATCC 824]
gi|325507632|gb|ADZ19268.1| Exodeoxyribonuclease (exoA) [Clostridium acetobutylicum EA 2018]
gi|336292303|gb|AEI33437.1| exodeoxyribonuclease (exoA) [Clostridium acetobutylicum DSM 1731]
Length = 250
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 120/181 (66%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP+S +YG+ HD EGR++T EF+ F++++ Y PNS + L RL YR+ EW+ S +Y+
Sbjct: 72 KPISYSYGINEEKHDKEGRVITLEFEDFYMVTVYTPNSKEKLARLEYRM-EWEDSFRNYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI+ GD+N AH EID+ NP N ++AGF+ EER F L GF+DT+R
Sbjct: 131 KALDEKKPVIVCGDMNVAHTEIDLKNPKTNTKNAGFSPEERSKF-TELLEAGFIDTYRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWR+DYF S+ L DK + I +V GSDH P+ L++
Sbjct: 190 YPDKEGIYSWWSYRFKAREKNAGWRIDYFCTSERLKDKLVSADIHTEVMGSDHCPVELVI 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|320528523|ref|ZP_08029680.1| exodeoxyribonuclease III [Solobacterium moorei F0204]
gi|320131109|gb|EFW23682.1| exodeoxyribonuclease III [Solobacterium moorei F0204]
Length = 251
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 117/181 (64%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTY + D EGR++T E+ F+ + YVPNS DGL RL YRI EW+ L ++
Sbjct: 74 EPLSVTYEIE-GDVTKEGRVITLEYPDFYFVCAYVPNSKDGLLRLPYRI-EWEEMLRKHL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL+KKKPVI TGDLN AH+EID+ NPA N ++ GF+DEER + L GF DTFR
Sbjct: 132 MELDKKKPVIYTGDLNVAHEEIDLKNPATNHKNPGFSDEERAAM-TKLLDSGFSDTFREL 190
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ +++W YR R+ N GWR+DYFLVS+ L D+ I + GSDH P+GL +
Sbjct: 191 YPDTQKFSWWSYRMKARERNVGWRIDYFLVSERLLANVQDALIFDETEGSDHCPVGLNIN 250
Query: 182 L 182
L
Sbjct: 251 L 251
>gi|257783920|ref|YP_003179137.1| exodeoxyribonuclease III Xth [Atopobium parvulum DSM 20469]
gi|257472427|gb|ACV50546.1| exodeoxyribonuclease III Xth [Atopobium parvulum DSM 20469]
Length = 259
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 115/181 (63%), Gaps = 3/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V +G D EGR+ EF+ F+ + Y PNS D L RL R+ EWD ++
Sbjct: 81 PLQVIRQIGCPVADDEGRVCALEFEKFWFVCVYTPNSKDQLARLDERL-EWDQHYRDFLA 139
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
EL K+KPVI GD N AH EID+ NP+ NR++AGF+DEER+SF L GF DTFR +H
Sbjct: 140 ELSKQKPVITCGDFNVAHNEIDLKNPSSNRQNAGFSDEERESF-TKLLDAGFTDTFRYRH 198
Query: 123 RGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ G Y++W YR RK N GWR+DYFLVS +A++ + IL ++ GSDH PI L ++
Sbjct: 199 PDITGAYSWWSYRFNARKNNAGWRIDYFLVSDRIAEQVKSASILSEIYGSDHCPIELSIE 258
Query: 182 L 182
L
Sbjct: 259 L 259
>gi|404330185|ref|ZP_10970633.1| exodeoxyribonuclease III [Sporolactobacillus vineae DSM 21990 =
SL153]
Length = 252
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+VTYG+G+ + D EGR++T E++ ++L++ Y PN+ L+RL +R+ +W + ++++
Sbjct: 73 KPLNVTYGIGVDEFDHEGRVITLEYEDYYLMTVYTPNAQRDLKRLGFRL-KWGQAFTNFI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L+++KPV+ GDLN AHQ ID+ NP N ++AGFT EERQ F + L GF+D+FR
Sbjct: 132 DRLDRRKPVVFCGDLNVAHQAIDLKNPKSNMKNAGFTAEERQDF-SELLDTGFIDSFRYL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
H G Y++W Y R N GWR+DYF++S+ L + D+ IL DV GSDH P+ + L
Sbjct: 191 HPDREGAYSWWSYMGNARARNVGWRIDYFVISERLKKRIKDAKILADVRGSDHCPVEIEL 250
Query: 181 KL 182
L
Sbjct: 251 AL 252
>gi|335047397|ref|ZP_08540418.1| exodeoxyribonuclease III [Parvimonas sp. oral taxon 110 str. F0139]
gi|333761205|gb|EGL38760.1| exodeoxyribonuclease III [Parvimonas sp. oral taxon 110 str. F0139]
Length = 250
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 119/180 (66%), Gaps = 3/180 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PLSV YG+GI +HD+EGRL+T E++ FFL++CY PNS L RL YR+ W+ + +Y+
Sbjct: 73 PLSVKYGMGIEEHDNEGRLITLEYEDFFLVTCYTPNSKQELLRLDYRMV-WEDAFRNYLL 131
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
EL K K VI+ GDLN AH+EID+ NP NR++AGFTD+ER+ L GF DTFR +
Sbjct: 132 ELNKTKSVIVCGDLNVAHKEIDLKNPKTNRKNAGFTDQEREKMSI-LLDSGFTDTFRYFY 190
Query: 123 RGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
Y++W Y R+ N GWR+DYFL S+ + D+ D+ I + GSDH P+ L +K
Sbjct: 191 PDKENEYSWWSYFGKSRERNTGWRIDYFLTSKDMDDRLVDAQIHQRILGSDHCPVYLEIK 250
>gi|345861274|ref|ZP_08813541.1| exodeoxyribonuclease III [Desulfosporosinus sp. OT]
gi|344325629|gb|EGW37140.1| exodeoxyribonuclease III [Desulfosporosinus sp. OT]
Length = 250
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 117/179 (65%), Gaps = 3/179 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++P + YG+G +HD EGR++T EF +++++ Y PNS GL RL YR+ +W+ +Y
Sbjct: 71 MEPNKIVYGMGKEEHDQEGRVITLEFGEYYVVTVYTPNSQRGLARLEYRM-KWEEDFLNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K+LE KPVI+ GDLN AH EID+ NP+ NR++AGF+ EER F ++ GFVDTFR
Sbjct: 130 LKDLENSKPVIVCGDLNVAHTEIDLKNPSTNRKNAGFSAEERNKFDE-LMNNGFVDTFRF 188
Query: 121 QH-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ YT+W Y R N GWR+DYF VS L D+ ++ I +V GSDH P+GL
Sbjct: 189 FYPNKTEAYTWWSYMFNARANNAGWRIDYFCVSAGLKDQLKEAIIYKNVLGSDHCPVGL 247
>gi|303234331|ref|ZP_07320970.1| exodeoxyribonuclease III [Finegoldia magna BVS033A4]
gi|302494447|gb|EFL54214.1| exodeoxyribonuclease III [Finegoldia magna BVS033A4]
Length = 253
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/179 (46%), Positives = 116/179 (64%), Gaps = 3/179 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++P+ V++G+GI +HD+EGR++T E++ FFL++ Y PNS L RL YR+ W+ +Y
Sbjct: 73 VEPIGVSFGIGIDEHDTEGRVITCEYEDFFLVNVYTPNSKQKLERLDYRMV-WEDEFHNY 131
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ L +KPVI+ GDLN AH EID+ NP NRRSAGFTDEER L+ G++DTFR
Sbjct: 132 LNILRDRKPVIVCGDLNVAHNEIDLKNPQSNRRSAGFTDEERNKMSL-LLNDGYIDTFRY 190
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ Y+YW Y R+ N GWR+DYF+VS L D D+ I + GSDH P+ L
Sbjct: 191 FYPDKTDEYSYWSYFAKARERNAGWRIDYFIVSDDLKDNLVDAKIHQSIMGSDHCPVEL 249
>gi|335998084|ref|ZP_08563996.1| exodeoxyribonuclease III [Lactobacillus ruminis SPM0211]
gi|335348598|gb|EGM50099.1| exodeoxyribonuclease III [Lactobacillus ruminis SPM0211]
Length = 254
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 123/178 (69%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P SV+YG+ S+ D EGR++T E+ SF+L+ CY PNS L+RL +R+ ++ + +Y+
Sbjct: 72 EPQSVSYGIKNSEFDHEGRVITLEYASFYLVCCYSPNSQPKLKRLDFRMG-FEDAFLNYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L++KKPVI+ GDLN AH+EID+ NP N R+AGF++EER S L G++DTFR
Sbjct: 131 NDLKEKKPVIMCGDLNVAHEEIDLKNPKTNHRNAGFSNEER-SCMTRLLENGYLDTFRFF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
H G Y++W YR RK N GWR+DYF+VS+SL D ++ IL D+ GSDH P+ L
Sbjct: 190 HPDETGIYSWWSYRFNARKNNAGWRIDYFIVSESLKDSLENAEILTDIMGSDHCPVLL 247
>gi|188585577|ref|YP_001917122.1| exodeoxyribonuclease III [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179350264|gb|ACB84534.1| exodeoxyribonuclease III [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 251
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 120/181 (66%), Gaps = 3/181 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I+PL+V YG+G + HD EGR++T EF ++L++ Y PNS L RL YR+ +W+ + +Y
Sbjct: 71 IQPLTVQYGIGEAKHDKEGRVITLEFCDYYLVNVYTPNSQRELARLDYRL-QWEDAFKNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ L+ +KPVI+ GDLN AH+EID+ NP N+R+AGFT+EER L+ GF+DTFR
Sbjct: 130 LVNLDSEKPVIVCGDLNVAHKEIDLKNPKNNKRNAGFTEEERNKL-TELLNAGFIDTFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G YT+W Y R+ N GWR+DYFL SQ L + D+ I D+ GSDH P+ L
Sbjct: 189 FYPDTEGAYTWWSYITKARERNAGWRIDYFLASQKLDNWLTDAEIHADIMGSDHCPVALK 248
Query: 180 L 180
L
Sbjct: 249 L 249
>gi|339521855|gb|AEJ84092.1| DNA-(apurinic or apyrimidinic site) lyase [Capra hircus]
Length = 318
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 114/181 (62%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ A +D+F L++ YVPN+G GL RL YR WD + ++K
Sbjct: 139 PLKVSYGIGEEEHDQEGRVIVAGYDAFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLK 197
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP++L GDLN AH+E D+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 198 GLASRKPLVLCGDLNVAHEESDVRNPKGNKKNAGFTPQERQGFGELLQAVPLTDSFRHLY 257
Query: 123 RGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+SQSL DS I GSDH PI L L
Sbjct: 258 PNTAYAYTFWTYMMNARSKNVGWRLDYFLLSQSLLPAVCDSKIRSKALGSDHCPITLYLA 317
Query: 182 L 182
L
Sbjct: 318 L 318
>gi|259047804|ref|ZP_05738205.1| exodeoxyribonuclease III [Granulicatella adiacens ATCC 49175]
gi|259035481|gb|EEW36736.1| exodeoxyribonuclease III [Granulicatella adiacens ATCC 49175]
Length = 254
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 118/182 (64%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLSV YG+GI +HD EGR++TAE++ F+L++ Y PN+ L RL YR W+ +++
Sbjct: 75 KPLSVEYGIGIEEHDQEGRVITAEYEKFYLVTVYTPNAKRDLSRLEYRQV-WEDDFLAFI 133
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+LE+ KPVI GDLN AH+EID+ NP N +AGFT EER F ++ VD FR
Sbjct: 134 KKLEETKPVIFCGDLNVAHKEIDLANPKTNTMNAGFTKEERAKFD-QVVNNDLVDAFRYL 192
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ +G Y++W Y G R N GWR+DYF++SQ L + I DVTGSDH P+ + +
Sbjct: 193 YPDTLGAYSWWSYMGGARARNVGWRIDYFVISQPLTAFLQEVKIRSDVTGSDHCPVEMKI 252
Query: 181 KL 182
+L
Sbjct: 253 EL 254
>gi|357614743|gb|EHJ69244.1| ap endonuclease [Danaus plexippus]
Length = 630
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 88/179 (49%), Positives = 115/179 (64%), Gaps = 2/179 (1%)
Query: 4 LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKE 63
++V YGL + DSEGR++TAE++ F+L+ YVPN+G L L R+ +W+ +VK
Sbjct: 446 MNVQYGLQNEELDSEGRIITAEYEQFYLICTYVPNAGRKLVSLPKRL-KWNDEFREHVKA 504
Query: 64 LEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHR 123
L++KKPVI+ GD+N AH EID+ NP N+++AGFT+EER L GFVDTFR H
Sbjct: 505 LDEKKPVIICGDMNVAHNEIDLTNPKTNKKNAGFTEEERAGM-TELLGDGFVDTFRHFHP 563
Query: 124 GVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
V YT+W Y R N GWRLDYF+VS+ L DS I +V GSDH PI L L L
Sbjct: 564 EKVAYTFWSYMANSRAKNVGWRLDYFIVSERLLPSICDSSIRGEVYGSDHCPIALYLHL 622
>gi|328782712|ref|XP_623551.2| PREDICTED: recombination repair protein 1 [Apis mellifera]
Length = 346
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 121/182 (66%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP+ V YGL S+ D+EGRL+TAE+ +F+L++ YVPN+G L L R+ +W+ +YV
Sbjct: 167 KPIDVKYGLNNSEFDNEGRLITAEYLNFYLINVYVPNAGQKLVTLPKRL-KWNEIFKTYV 225
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+ L++KKPVI+ GD+N AH+EID+ NP N ++AGFT EER +FL+ GFVDTFRA
Sbjct: 226 RNLDEKKPVIICGDMNVAHKEIDLRNPKTNIKNAGFTIEERDGM-TDFLATGFVDTFRAL 284
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWRLDYFLVS+ + D D+ I V GSDH PI L +
Sbjct: 285 YPDKTDAYTFWSYFANARSKNIGWRLDYFLVSERIKDNVCDNVIRDKVYGSDHCPIVLYI 344
Query: 181 KL 182
+
Sbjct: 345 NI 346
>gi|323340218|ref|ZP_08080482.1| exodeoxyribonuclease III [Lactobacillus ruminis ATCC 25644]
gi|417972789|ref|ZP_12613677.1| exodeoxyribonuclease III [Lactobacillus ruminis ATCC 25644]
gi|323092409|gb|EFZ35017.1| exodeoxyribonuclease III [Lactobacillus ruminis ATCC 25644]
gi|346330854|gb|EGX99085.1| exodeoxyribonuclease III [Lactobacillus ruminis ATCC 25644]
Length = 254
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 122/178 (68%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P SV+YG+ S+ D EGR++T E+ SF+L+ CY PNS L+RL +R+ D L+ Y+
Sbjct: 72 EPQSVSYGIHNSEFDHEGRVITLEYASFYLVCCYSPNSQPKLKRLDFRMGFEDAFLN-YL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L++KKPVI+ GDLN AH+EID+ NP N R+AGF++EER S L G++DTFR
Sbjct: 131 NDLKEKKPVIMCGDLNVAHEEIDLKNPKTNHRNAGFSNEER-SCMTRLLENGYLDTFRFF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
H G Y++W YR RK N GWR+DYF+VS+SL D ++ IL D+ GSDH P+ L
Sbjct: 190 HPDETGIYSWWSYRFNARKNNAGWRIDYFIVSESLKDSLENAEILTDIMGSDHCPVLL 247
>gi|322378535|ref|ZP_08052983.1| exodeoxyribonuclease [Helicobacter suis HS1]
gi|321149049|gb|EFX43501.1| exodeoxyribonuclease [Helicobacter suis HS1]
Length = 306
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 120/181 (66%), Gaps = 3/181 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I PL V+YG+GI++HD+EGR++T E+ +F+L++ Y PN+ GL RL YR+ EW+ S +
Sbjct: 122 IAPLQVSYGIGIAEHDTEGRVITCEYPNFYLVNVYTPNAQRGLLRLPYRL-EWERSFRGF 180
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++ L +KK V++ GDLN AH EID+ NP NR +AGF+D ER +F L+ G +DTFR
Sbjct: 181 LQNLMQKKAVVVCGDLNVAHNEIDLTNPQSNRYNAGFSDPERDAF-RQLLNLGLIDTFRH 239
Query: 121 QH-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ YT+W Y + R N GWR+DYFL SQ+L +YI + GSDH P+GL
Sbjct: 240 FYPTKAESYTWWSYINQARAKNIGWRIDYFLTSQTLNSCLQSAYIYNHILGSDHCPVGLD 299
Query: 180 L 180
L
Sbjct: 300 L 300
>gi|159490968|ref|XP_001703445.1| hypothetical protein CHLREDRAFT_143864 [Chlamydomonas reinhardtii]
gi|158280369|gb|EDP06127.1| predicted protein [Chlamydomonas reinhardtii]
Length = 437
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 129/207 (62%), Gaps = 31/207 (14%)
Query: 3 PLSVTYGLGI---------SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEW 53
PLSV GLG +H+ EGR+VT E + FL++ YVPNSG+GL+RL YR+ W
Sbjct: 223 PLSVVVGLGHGGPGAADPDPEHEGEGRVVTVELEGLFLVNVYVPNSGEGLKRLDYRVGRW 282
Query: 54 DPSLSSYVKELEKK-KPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSK 112
D + +++++ L+ + KPV++TGDLNCAH+EIDI+ P N +SAGFT EER+SFG L++
Sbjct: 283 DGAFAAFLQGLQARGKPVVVTGDLNCAHKEIDIHAPKTNLKSAGFTPEERESFGRLLLAE 342
Query: 113 -GFVDTFRAQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADK------------- 158
G DTFR + V YTY+ R R+ N+GWRLDYFL S+S+
Sbjct: 343 AGLADTFRRLYPDTVAYTYFTRRFNCREKNKGWRLDYFLTSESMMPPELQQGGEGAAAAA 402
Query: 159 -------FHDSYILPDVTGSDHSPIGL 178
+D++I+ DV GSDH P+GL
Sbjct: 403 GPASAWAVYDTWIMQDVYGSDHLPLGL 429
>gi|315641336|ref|ZP_07896412.1| exodeoxyribonuclease III [Enterococcus italicus DSM 15952]
gi|315482909|gb|EFU73429.1| exodeoxyribonuclease III [Enterococcus italicus DSM 15952]
Length = 252
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 119/179 (66%), Gaps = 3/179 (1%)
Query: 5 SVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKEL 64
+V YG+G +HD EGR++T E+ F+L++CY PNS + L+RL YR+ EW+ +Y+ EL
Sbjct: 75 NVFYGIGKEEHDQEGRVITLEYPQFYLVTCYTPNSQNELKRLDYRM-EWEDDFVAYLDEL 133
Query: 65 EKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRG 124
+K +PVI+ GDLN AHQEID+ N N+++AGFT+EER F A L G+ DTFR +
Sbjct: 134 KKDRPVIVCGDLNVAHQEIDLKNWKTNQKNAGFTNEERAKFTA-LLDHGYTDTFRHFYPE 192
Query: 125 VVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
+ G Y++W YR RK N GWR+DYF+VS L + I D+ GSDH P+ L + L
Sbjct: 193 LTGAYSWWSYRFNARKNNAGWRIDYFIVSNDLTSHLTSASIHADILGSDHCPVELQVTL 251
>gi|306820340|ref|ZP_07453979.1| exodeoxyribonuclease III [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|402309414|ref|ZP_10828407.1| exodeoxyribonuclease III [Eubacterium sp. AS15]
gi|304551669|gb|EFM39621.1| exodeoxyribonuclease III [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|400372381|gb|EJP25325.1| exodeoxyribonuclease III [Eubacterium sp. AS15]
Length = 251
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 89/183 (48%), Positives = 115/183 (62%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I+P+ V YGLG +HD EGRL+T E+ F++ + Y PNS L RL YR EW+ +
Sbjct: 71 IEPIDVFYGLGKEEHDDEGRLITLEYPEFYVSTVYTPNSKQELLRLDYR-QEWEDEFREF 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
K L+ KKPVI+ GD+N AH+EID+ NP NR++ GFTDEER+ F L GF DTFR
Sbjct: 130 FKNLDAKKPVIICGDMNVAHKEIDLKNPKTNRKNPGFTDEEREKFTL-LLDAGFTDTFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ Y++W YR RK N GWR+DYFLVS L +K + I DV GSDH P+ +
Sbjct: 189 FYPDKENEYSWWSYRFNARKNNTGWRIDYFLVSDRLQEKLTAASIHQDVFGSDHCPVSVE 248
Query: 180 LKL 182
L L
Sbjct: 249 LSL 251
>gi|325679379|ref|ZP_08158964.1| exodeoxyribonuclease III [Ruminococcus albus 8]
gi|324108976|gb|EGC03207.1| exodeoxyribonuclease III [Ruminococcus albus 8]
Length = 250
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 122/182 (67%), Gaps = 4/182 (2%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P +VTYGL + H EGR++T E+D F+ + CYVPN+ + L+R+ YR+ E++ + +Y+
Sbjct: 72 EPKAVTYGLNGA-HTDEGRVITCEYDDFYFVCCYVPNAQNELKRIDYRM-EFEDDMRAYL 129
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L+K KPVI GDLN AH+EID+ NP N +AGF+D+ER F L+ GF DTFR
Sbjct: 130 CGLDKLKPVIYCGDLNVAHEEIDLKNPKSNVGNAGFSDQERGKF-TELLAAGFADTFRRL 188
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+VS+ L DK DS IL DV GSDH P+ L +
Sbjct: 189 YPETTGVYSWWSYRFNARKNNAGWRIDYFVVSERLMDKVGDSKILTDVMGSDHCPVQLDI 248
Query: 181 KL 182
+
Sbjct: 249 TI 250
>gi|420154891|ref|ZP_14661764.1| exodeoxyribonuclease III [Clostridium sp. MSTE9]
gi|394760027|gb|EJF42663.1| exodeoxyribonuclease III [Clostridium sp. MSTE9]
Length = 252
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 119/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV Y + DH EGR +T EF+SF+L++ Y PNS L RL YR+ EW+ + YV
Sbjct: 72 EPLSVCYDIRHPDHTGEGRAITLEFESFYLVNVYTPNSQRELVRLPYRM-EWENAFREYV 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L++KKPVI+ GDLN AHQEID+ N N +AGF+ EER L+ GF+D+FR
Sbjct: 131 TQLDEKKPVIICGDLNVAHQEIDLKNAKSNIGNAGFSYEERGKL-TELLASGFLDSFREL 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G YT+W Y R+ N GWR+DYFL+S+ L +K DS I +V GSDH P+GLIL
Sbjct: 190 YPDLTGAYTWWSYMFKARQNNAGWRIDYFLISERLREKLSDSLIYSEVQGSDHCPVGLIL 249
>gi|403340594|gb|EJY69586.1| Exodeoxyribonuclease III family protein [Oxytricha trifallax]
Length = 437
Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 115/180 (63%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSG-DGLRRLSYRITEWDPSLSSY 60
KP V YG+GIS HD EGR+V A+FD F L++ Y+PN+G GL RL YR+ EWD +Y
Sbjct: 179 KPTKVEYGIGISKHDKEGRMVNAQFDKFNLVATYIPNAGVMGLDRLGYRVNEWDRDFHTY 238
Query: 61 VK--ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTF 118
+K E+ KPVI GDLN A++ IDIYNP G +SAG+T +ER SF A + F+DT+
Sbjct: 239 LKNTEVTTGKPVIWCGDLNVANEPIDIYNPKGKEKSAGYTIQERNSFKAFLKDRAFIDTY 298
Query: 119 RAQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
R + V Y+YW R G R ++GWRLDYF+VS + S I + GSDH P+ L
Sbjct: 299 RHLNPHSVKYSYWNLRSGARDKDQGWRLDYFVVSDFMMPSVLTSEINNEYHGSDHCPLSL 358
>gi|299821801|ref|ZP_07053689.1| exodeoxyribonuclease III [Listeria grayi DSM 20601]
gi|299817466|gb|EFI84702.1| exodeoxyribonuclease III [Listeria grayi DSM 20601]
Length = 254
Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 119/182 (65%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YGL H+ EGR++T EF +F+ ++ Y PNS L+RL YR TEW+ + + ++
Sbjct: 73 EPLSVQYGLPEDVHNQEGRVITLEFPAFYFVTVYTPNSQAELKRLDYR-TEWEQAFADHI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L+K+KPV+ GDLN AHQEID+ NP NR++ GF+D+ER FG L GFVDTFR
Sbjct: 132 IALDKQKPVVFCGDLNVAHQEIDLKNPKTNRKNPGFSDQERAMFG-QLLDNGFVDTFRYL 190
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W YR R N GWR+DYF+VS L+D ++ I +V GSDH P+ L +
Sbjct: 191 YPEQEDAYSWWSYRMNARSRNVGWRIDYFVVSSRLSDSIQEARIHAEVLGSDHCPVELEI 250
Query: 181 KL 182
+
Sbjct: 251 AI 252
>gi|297587792|ref|ZP_06946436.1| exodeoxyribonuclease III [Finegoldia magna ATCC 53516]
gi|302380031|ref|ZP_07268510.1| exodeoxyribonuclease III [Finegoldia magna ACS-171-V-Col3]
gi|297574481|gb|EFH93201.1| exodeoxyribonuclease III [Finegoldia magna ATCC 53516]
gi|302312257|gb|EFK94259.1| exodeoxyribonuclease III [Finegoldia magna ACS-171-V-Col3]
Length = 253
Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 115/178 (64%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+ V++G+GI +HD+EGR++T E++ FFL++ Y PNS L RL YR+ W+ +Y+
Sbjct: 74 EPIGVSFGIGIDEHDTEGRVITCEYEDFFLVNVYTPNSKQKLERLDYRMV-WEDEFHNYL 132
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L +KPVI+ GDLN AH EID+ NP NRRSAGFTDEER L+ G++DTFR
Sbjct: 133 NILRDRKPVIVCGDLNVAHNEIDLKNPQSNRRSAGFTDEERNKMSL-LLNDGYIDTFRYF 191
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ Y+YW Y R+ N GWR+DYF+VS L D D+ I + GSDH P+ L
Sbjct: 192 YPDKTDEYSYWSYFAKARERNAGWRIDYFIVSDDLKDNLVDAKIHQSIMGSDHCPVEL 249
>gi|402836561|ref|ZP_10885097.1| exodeoxyribonuclease III [Mogibacterium sp. CM50]
gi|402271037|gb|EJU20293.1| exodeoxyribonuclease III [Mogibacterium sp. CM50]
Length = 249
Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 118/180 (65%), Gaps = 4/180 (2%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V YG+ H+ EGR++T E+D F+L+ YVPNS D L+R+ YR+ E++ L +Y+
Sbjct: 73 PLRVAYGIE-GKHNDEGRVITLEYDDFYLICAYVPNSQDELKRIDYRM-EYEDDLRAYMS 130
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
+L+K KPV+ GDLN AH+EID+ NP NR +AGF+DEER L GF DT+R H
Sbjct: 131 KLDKVKPVVYCGDLNVAHEEIDLKNPKSNRGNAGFSDEERSKM-TELLGAGFTDTYRHLH 189
Query: 123 RGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
G Y++W YR R N GWR+DYF+VS L K ++ IL DV GSDH P+ L+L+
Sbjct: 190 PDTPGVYSWWSYRFNARANNAGWRIDYFIVSNRLETKIKEAAILTDVYGSDHCPVSLVLE 249
>gi|347525140|ref|YP_004831888.1| exodeoxyribonuclease III [Lactobacillus ruminis ATCC 27782]
gi|345284099|gb|AEN77952.1| Exodeoxyribonuclease III [Lactobacillus ruminis ATCC 27782]
Length = 254
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/178 (47%), Positives = 122/178 (68%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P SV+YG+ S+ D EGR++T E+ SF+L+ CY PNS L+RL +R+ ++ + +Y+
Sbjct: 72 EPQSVSYGIQNSEFDHEGRVITLEYASFYLVCCYSPNSQPKLKRLDFRMG-FEDAFLNYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L++KKPVI+ GDLN AH+EID+ NP N ++AGF++EER S L G++DTFR
Sbjct: 131 NALKEKKPVIMCGDLNVAHEEIDLKNPKTNHKNAGFSNEER-SCMTRLLENGYLDTFRFF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
H G Y++W YR RK N GWR+DYF+VS+SL D ++ IL D+ GSDH P+ L
Sbjct: 190 HPDETGIYSWWSYRFNARKNNAGWRIDYFIVSESLKDSLENAEILTDIMGSDHCPVLL 247
>gi|336396024|ref|ZP_08577423.1| exonuclease III [Lactobacillus farciminis KCTC 3681]
Length = 253
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 118/181 (65%), Gaps = 2/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV GLGI + D EGR +T EF ++L++ Y PNS L+R+ YR+ +D L Y+
Sbjct: 72 EPISVKQGLGIEEFDDEGRTITLEFPDYYLINSYTPNSQPKLKRVDYRM-RYDDVLREYM 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L KPVIL GDLN AH+EID+ NP N ++ GF+D+ER F + L GF+D+FR+
Sbjct: 131 LQLSADKPVILCGDLNVAHEEIDLKNPKTNHKNPGFSDQERDKF-SELLDSGFIDSFRSL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
H + Y++W YR RK N GWR+DYF+VS++ D+ IL D+ GSDH PI L L
Sbjct: 190 HPQEIKYSWWSYRFNARKNNAGWRIDYFVVSKNGQQLIQDADILTDIYGSDHCPIELDLN 249
Query: 182 L 182
+
Sbjct: 250 I 250
>gi|363900200|ref|ZP_09326706.1| exodeoxyribonuclease [Oribacterium sp. ACB1]
gi|395209879|ref|ZP_10398907.1| exodeoxyribonuclease III [Oribacterium sp. ACB8]
gi|361957054|gb|EHL10366.1| exodeoxyribonuclease [Oribacterium sp. ACB1]
gi|394704864|gb|EJF12396.1| exodeoxyribonuclease III [Oribacterium sp. ACB8]
Length = 252
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YG+GI++HD EGR++T EF ++L++ YVPNS + L+RL YR+ E++ + +++
Sbjct: 73 EPLSVQYGIGITEHDQEGRVITLEFKDYYLITVYVPNSQNELKRLPYRM-EFEDAFLNFI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
LEKKKPVI GDLN AH+EID+ NP N +AGF+DEER F + LS G++D+FR
Sbjct: 132 LNLEKKKPVIYCGDLNVAHEEIDLKNPDTNHLNAGFSDEERAKF-SRVLSSGYLDSFRYF 190
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W YR R N GWR+DYF+VS L DK + I +V GSDH P+ + L
Sbjct: 191 YPDKEEEYSWWSYRTKARDRNVGWRIDYFVVSVKLKDKLLSASIHQEVMGSDHCPVEITL 250
Query: 181 KL 182
+
Sbjct: 251 DI 252
>gi|296880312|ref|ZP_06904277.1| exodeoxyribonuclease III, partial [Clostridium difficile NAP07]
gi|296428755|gb|EFH14637.1| exodeoxyribonuclease III [Clostridium difficile NAP07]
Length = 181
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 117/181 (64%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL V YG+ I +HD EGR++T EF+ F+ ++ Y PNS L+RL YR T W+ Y+
Sbjct: 3 EPLKVMYGINIEEHDKEGRVITLEFEDFYFVTVYTPNSQSELKRLEYR-TRWEDDFIDYL 61
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+ KPVI+ GD+N AH+EID+ NP N ++AGFT EER+ F + L GF+DT+R
Sbjct: 62 TKLDNHKPVIVCGDMNVAHKEIDLKNPKNNMKNAGFTKEEREKF-SKLLDSGFIDTYRYF 120
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF S+ L D+ + I +V GSDH P+ L +
Sbjct: 121 NPDKEGVYSWWSYRFNARKNNAGWRIDYFCASKKLEDRLISADIHTEVLGSDHCPVELEI 180
Query: 181 K 181
K
Sbjct: 181 K 181
>gi|423082270|ref|ZP_17070862.1| exodeoxyribonuclease III [Clostridium difficile 002-P50-2011]
gi|423087662|ref|ZP_17076048.1| exodeoxyribonuclease III [Clostridium difficile 050-P50-2011]
gi|357543976|gb|EHJ25982.1| exodeoxyribonuclease III [Clostridium difficile 050-P50-2011]
gi|357548596|gb|EHJ30456.1| exodeoxyribonuclease III [Clostridium difficile 002-P50-2011]
Length = 250
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 117/181 (64%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL V YG+ I +HD EGR++T EF+ F+ ++ Y PNS L+RL YR T W+ Y+
Sbjct: 72 EPLKVMYGINIEEHDKEGRVITLEFEDFYFVTVYTPNSQSELKRLEYR-TRWEDDFIDYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+ KPVI+ GD+N AH+EID+ NP N ++AGFT EER+ F + L GF+DT+R
Sbjct: 131 TKLDNHKPVIVCGDMNVAHKEIDLKNPKNNMKNAGFTKEEREKF-SKLLDSGFIDTYRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF S+ L D+ + I +V GSDH P+ L +
Sbjct: 190 NPDKEGVYSWWSYRFNARKNNAGWRIDYFCASKKLEDRLVSADIHTEVLGSDHCPVELEI 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|414877767|tpg|DAA54898.1| TPA: hypothetical protein ZEAMMB73_124068 [Zea mays]
Length = 479
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/163 (54%), Positives = 105/163 (64%), Gaps = 48/163 (29%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPLS+ YGLGI D D+EGR+VT EFD+ +LL+ YVPNS DGL+RL+YR+TEWDPSL +Y
Sbjct: 203 VKPLSIKYGLGIPDQDTEGRVVTVEFDNLYLLTAYVPNSRDGLKRLTYRVTEWDPSLGNY 262
Query: 61 VK------------------------------------------------ELEKKKPVIL 72
+K ELEK KPVIL
Sbjct: 263 MKAILSLYLSWLDGLSNTSSEFNSPCEQIFKLDLCELFLMQCSGAVFPLQELEKSKPVIL 322
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFV 115
TGDLNCAHQEIDI++PAGNRRSAGFT+EER+SFG NFLSKGFV
Sbjct: 323 TGDLNCAHQEIDIHDPAGNRRSAGFTNEERESFGTNFLSKGFV 365
>gi|255655350|ref|ZP_05400759.1| putative exodeoxyribonuclease [Clostridium difficile QCD-23m63]
gi|296451338|ref|ZP_06893076.1| exodeoxyribonuclease III [Clostridium difficile NAP08]
gi|296259754|gb|EFH06611.1| exodeoxyribonuclease III [Clostridium difficile NAP08]
Length = 250
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 117/181 (64%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL V YG+ I +HD EGR++T EF+ F+ ++ Y PNS L+RL YR T W+ Y+
Sbjct: 72 EPLKVMYGINIEEHDKEGRVITLEFEDFYFVTVYTPNSQSELKRLEYR-TRWEDDFIDYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+ KPVI+ GD+N AH+EID+ NP N ++AGFT EER+ F + L GF+DT+R
Sbjct: 131 TKLDNHKPVIVCGDMNVAHKEIDLKNPKNNMKNAGFTKEEREKF-SKLLDSGFIDTYRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF S+ L D+ + I +V GSDH P+ L +
Sbjct: 190 NPDKEGVYSWWSYRFNARKNNAGWRIDYFCASKKLEDRLISADIHTEVLGSDHCPVELEI 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|330836714|ref|YP_004411355.1| exodeoxyribonuclease III [Sphaerochaeta coccoides DSM 17374]
gi|329748617|gb|AEC01973.1| exodeoxyribonuclease III Xth [Sphaerochaeta coccoides DSM 17374]
Length = 252
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 117/182 (64%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP+ VT+G+ D+EGR++TAE+ ++FL+ Y PNS L RL YR+ +WD + +Y+
Sbjct: 73 KPVRVTFGIAPFIEDAEGRVITAEYPAYFLVCVYTPNSQRELLRLDYRM-KWDDAFRAYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
LE KPV + GDLN AH+EID+ NP N R+AGFT EER F FL GF D+FR
Sbjct: 132 LSLEAMKPVFVCGDLNVAHKEIDLKNPKSNVRNAGFTQEERDKFSL-FLDAGFTDSFRHL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ V+ Y++W Y R N GWR+DY+L S ADK HDS I + GSDH+P+ L+L
Sbjct: 191 YPHVIDRYSWWSYMANARAKNIGWRIDYWLTSNRYADKIHDSLIDDHIPGSDHAPVALLL 250
Query: 181 KL 182
L
Sbjct: 251 DL 252
>gi|260682949|ref|YP_003214234.1| exodeoxyribonuclease [Clostridium difficile CD196]
gi|260686547|ref|YP_003217680.1| exodeoxyribonuclease [Clostridium difficile R20291]
gi|260209112|emb|CBA62286.1| putative exodeoxyribonuclease [Clostridium difficile CD196]
gi|260212563|emb|CBE03542.1| putative exodeoxyribonuclease [Clostridium difficile R20291]
Length = 255
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 117/181 (64%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL V YG+ I +HD EGR++T EF+ F+ ++ Y PNS L+RL YR T W+ Y+
Sbjct: 77 EPLKVMYGINIEEHDKEGRVITLEFEDFYFVTVYTPNSQSELKRLEYR-TRWEDDFIDYL 135
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+ KPVI+ GD+N AH+EID+ NP N ++AGFT EER+ F + L GF+DT+R
Sbjct: 136 TKLDNHKPVIVCGDMNVAHKEIDLKNPKNNMKNAGFTKEEREKF-SKLLDSGFIDTYRYF 194
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF S+ L D+ + I ++ GSDH P+ L +
Sbjct: 195 NPDKEGVYSWWSYRFNARKNNAGWRIDYFCASKKLEDRLVSADIHTEILGSDHCPVELEI 254
Query: 181 K 181
K
Sbjct: 255 K 255
>gi|291545257|emb|CBL18366.1| exodeoxyribonuclease III [Ruminococcus champanellensis 18P13]
Length = 256
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 116/179 (64%), Gaps = 3/179 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PLSV G+ H+ EGR++T E+ F+L++ YVPNS L RL YR+ EW+ +L Y+
Sbjct: 73 PLSVQRDFGLPAHNGEGRVLTLEYPDFYLVNAYVPNSKRELLRLDYRM-EWEDALRQYLL 131
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L+ +KPVI GDLN AH+EID+ NP NRR+AGFTDEER + L GF DTFR +
Sbjct: 132 GLDARKPVIYCGDLNVAHREIDLKNPKSNRRNAGFTDEERGRL-STLLDSGFTDTFRLLY 190
Query: 123 RGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
G YT+W Y R+ N GWR+DYF+VS +A DS I DV GSDH P+GL++
Sbjct: 191 PDTAGAYTWWSYMFHAREKNAGWRIDYFIVSNRIAPLVQDSLIYKDVLGSDHCPVGLLV 249
>gi|390345498|ref|XP_789515.3| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like
[Strongylocentrotus purpuratus]
Length = 342
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 120/183 (65%), Gaps = 4/183 (2%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVT G+GI +HD EGRL+TAE+DSF+ + YVPNS L RL YR EWD +Y+
Sbjct: 162 EPLSVTKGMGIEEHDKEGRLITAEYDSFYFVGVYVPNSSRKLVRLDYR-QEWDKDFHAYL 220
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNR-RSAGFTDEERQSFGANFLSKGFVDTFRA 120
K+L+ KKPVI GD+N AH+EID+ NP NR ++ GFTD+ER+ F + L GFVD+FR
Sbjct: 221 KKLDAKKPVICCGDMNVAHEEIDLKNPKSNRNKTPGFTDQEREGF-TSLLDMGFVDSFRH 279
Query: 121 QH-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ Y++W Y R N GWRLDY ++S++L K D+ + GSDH P+ +
Sbjct: 280 LYPEEADAYSFWTYMGNCRAKNVGWRLDYGVISKALVPKLCDNQMRLQTFGSDHCPMVVS 339
Query: 180 LKL 182
L +
Sbjct: 340 LAM 342
>gi|126698940|ref|YP_001087837.1| exodeoxyribonuclease [Clostridium difficile 630]
gi|254974886|ref|ZP_05271358.1| putative exodeoxyribonuclease [Clostridium difficile QCD-66c26]
gi|255092273|ref|ZP_05321751.1| putative exodeoxyribonuclease [Clostridium difficile CIP 107932]
gi|255100359|ref|ZP_05329336.1| putative exodeoxyribonuclease [Clostridium difficile QCD-63q42]
gi|255306301|ref|ZP_05350472.1| putative exodeoxyribonuclease [Clostridium difficile ATCC 43255]
gi|255314013|ref|ZP_05355596.1| putative exodeoxyribonuclease [Clostridium difficile QCD-76w55]
gi|255516693|ref|ZP_05384369.1| putative exodeoxyribonuclease [Clostridium difficile QCD-97b34]
gi|255649791|ref|ZP_05396693.1| putative exodeoxyribonuclease [Clostridium difficile QCD-37x79]
gi|306519893|ref|ZP_07406240.1| putative exodeoxyribonuclease [Clostridium difficile QCD-32g58]
gi|384360536|ref|YP_006198388.1| exodeoxyribonuclease III [Clostridium difficile BI1]
gi|423090927|ref|ZP_17079213.1| exodeoxyribonuclease III [Clostridium difficile 70-100-2010]
gi|115250377|emb|CAJ68199.1| Exodeoxyribonuclease [Clostridium difficile 630]
gi|357556042|gb|EHJ37664.1| exodeoxyribonuclease III [Clostridium difficile 70-100-2010]
Length = 250
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 117/181 (64%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL V YG+ I +HD EGR++T EF+ F+ ++ Y PNS L+RL YR T W+ Y+
Sbjct: 72 EPLKVMYGINIEEHDKEGRVITLEFEDFYFVTVYTPNSQSELKRLEYR-TRWEDDFIDYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+ KPVI+ GD+N AH+EID+ NP N ++AGFT EER+ F + L GF+DT+R
Sbjct: 131 TKLDNHKPVIVCGDMNVAHKEIDLKNPKNNMKNAGFTKEEREKF-SKLLDSGFIDTYRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF S+ L D+ + I ++ GSDH P+ L +
Sbjct: 190 NPDKEGVYSWWSYRFNARKNNAGWRIDYFCASKKLEDRLVSADIHTEILGSDHCPVELEI 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|239792809|dbj|BAH72703.1| ACYPI007473 [Acyrthosiphon pisum]
Length = 175
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 112/168 (66%), Gaps = 3/168 (1%)
Query: 16 DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVILTGD 75
D+EGR++ AE++ FFL+S Y+PN+G GL+ L R+ +WD + Y+KEL+ KKPV+LTGD
Sbjct: 10 DNEGRVIEAEYEQFFLVSTYIPNAGAGLKTLPKRM-KWDEAFRKYLKELDTKKPVVLTGD 68
Query: 76 LNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYWGYR 134
LN AH+EIDI NP N +SAGFT EER + L +GFVDTFR + G YT+W Y
Sbjct: 69 LNVAHEEIDIANPKTNTKSAGFTKEERDNMSL-LLEQGFVDTFRTLNPEKTGAYTFWTYF 127
Query: 135 HGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
H R N GWRLDYF+ S+ D DS I +V GSDH PI + +
Sbjct: 128 HNSRAKNVGWRLDYFITSKRFMDNVCDSTIRNEVLGSDHCPIVFYINI 175
>gi|317133644|ref|YP_004092958.1| exodeoxyribonuclease III Xth [Ethanoligenens harbinense YUAN-3]
gi|315471623|gb|ADU28227.1| exodeoxyribonuclease III Xth [Ethanoligenens harbinense YUAN-3]
Length = 256
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 116/181 (64%), Gaps = 3/181 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+ PLSV Y +G +H EGR++T E ++FFL++ Y PNS L RL YR+ W+ + +Y
Sbjct: 71 VPPLSVRYDMGEPEHTGEGRVITVESEAFFLVNVYTPNSQRDLVRLDYRM-RWEDAFRAY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ L + KPV++ GD+N AH+EIDI NP N +AGFT EERQ + L GF+DTFRA
Sbjct: 130 LLTLNRDKPVVVCGDMNVAHREIDIKNPKSNIHNAGFTPEERQKM-TDLLEAGFIDTFRA 188
Query: 121 QH-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ YT+W Y R+ N GWR+DYFLVS L + DS I DV GSDH P+GL+
Sbjct: 189 LYPEQKDAYTWWSYMRKARERNAGWRIDYFLVSDRLRGQVEDSTIYADVPGSDHCPVGLL 248
Query: 180 L 180
L
Sbjct: 249 L 249
>gi|164688495|ref|ZP_02212523.1| hypothetical protein CLOBAR_02140 [Clostridium bartlettii DSM
16795]
gi|164602908|gb|EDQ96373.1| exodeoxyribonuclease III [Clostridium bartlettii DSM 16795]
Length = 252
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 119/181 (65%), Gaps = 3/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV YG+ I +HD EGR++T EFD+F+ ++ Y PNS L+RL YR+ +W+ Y+
Sbjct: 72 EPISVNYGIQIEEHDKEGRVITLEFDNFYFVTVYTPNSQSELKRLDYRM-KWEDDFRKYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L KK VI+ GDLN AH+EID+ NP NR++AGFTD+ER+ F L GF+DT+R
Sbjct: 131 LKLNSKKGVIVCGDLNVAHKEIDLKNPKTNRKNAGFTDQEREKF-TELLESGFIDTYRHF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWR+DYF S+ L + + I + GSDH PI L++
Sbjct: 190 NPDKEGIYSWWSYRFKAREKNAGWRIDYFCASKDLENNLVSADIHTQILGSDHCPIELVV 249
Query: 181 K 181
K
Sbjct: 250 K 250
>gi|374710435|ref|ZP_09714869.1| apurinic/apyrimidinic endonuclease [Sporolactobacillus inulinus
CASD]
Length = 253
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/182 (46%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL VTYG+GI HD EGRL+T E++ ++L++ Y PN+ L RL+YR+ EW + + Y+
Sbjct: 73 KPLRVTYGMGIEVHDQEGRLITLEYEDYYLVTVYTPNAKRDLTRLAYRL-EWGAAFTDYM 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L++KKPVI GDLN AHQ ID+ P N+ ++GFT EER+ F A L+ GFVD+FR
Sbjct: 132 KRLDEKKPVIFCGDLNVAHQAIDLTYPKNNKGNSGFTIEEREDFTA-LLNNGFVDSFRHL 190
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W + R+ N GWR+DYF++S+ L+ D+ +L ++ GSDH P+ L L
Sbjct: 191 YPERTDAYSWWSFLFNARERNIGWRIDYFVLSKCLSSSIRDAKLLTEIYGSDHCPVELDL 250
Query: 181 KL 182
L
Sbjct: 251 DL 252
>gi|373493819|ref|ZP_09584429.1| exodeoxyribonuclease [Eubacterium infirmum F0142]
gi|371969524|gb|EHO86969.1| exodeoxyribonuclease [Eubacterium infirmum F0142]
Length = 249
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 116/182 (63%), Gaps = 5/182 (2%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSVTY HD EGR V E+D F+LL+ YVPN+ L+RL YR+ +W+ L + +
Sbjct: 72 EPLSVTYNF--EGHDDEGRAVLLEYDKFYLLNVYVPNAQPELKRLEYRM-QWEDDLRAML 128
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL KKK V++ GDLN AH+EID+ NP NR + GF+DEER L GF DTFR
Sbjct: 129 SELAKKKHVVMCGDLNVAHEEIDLKNPKTNRGNPGFSDEERAKM-TELLGAGFTDTFRHL 187
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR RK N GWR+DYF+V + L DK ++ I PDV GSDH P+ L L
Sbjct: 188 YPEQEGAYSWWSYRGNARKNNTGWRIDYFVVDEGLKDKIKEAAIHPDVMGSDHCPVSLEL 247
Query: 181 KL 182
+
Sbjct: 248 DI 249
>gi|379726888|ref|YP_005319073.1| exodeoxyribonuclease III [Melissococcus plutonius DAT561]
gi|376317791|dbj|BAL61578.1| exodeoxyribonuclease III [Melissococcus plutonius DAT561]
Length = 254
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 119/179 (66%), Gaps = 3/179 (1%)
Query: 5 SVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKEL 64
V YGL + +HD EGRL+T E+ +F+L++CY PNS L+RL+YR+T W+ + Y+ +L
Sbjct: 75 KVYYGLNMEEHDQEGRLLTLEYPNFYLVNCYTPNSQPELKRLAYRMT-WENAFRDYLIKL 133
Query: 65 EKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRG 124
+ KKPVIL GDLN AHQ ID+ N N+ SAGF+ EER+ L GF+DT+R +
Sbjct: 134 KSKKPVILCGDLNVAHQPIDLKNWRTNQHSAGFSPEEREKM-TQLLDNGFIDTYRYFYPD 192
Query: 125 VVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
G Y++W YR RK N GWR+DYF+VS +L ++ I ++TGSDH P+G+ L L
Sbjct: 193 KEGVYSWWSYRFNARKNNAGWRIDYFIVSDNLKPTLKEATIYTEITGSDHCPVGVELDL 251
>gi|218283512|ref|ZP_03489502.1| hypothetical protein EUBIFOR_02092 [Eubacterium biforme DSM 3989]
gi|218215780|gb|EEC89318.1| hypothetical protein EUBIFOR_02092 [Eubacterium biforme DSM 3989]
Length = 249
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 118/181 (65%), Gaps = 4/181 (2%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLS+ YG+ + + D EGR++T E+ F+L++ Y P SGDGL RL YR+ EWD + +Y+
Sbjct: 73 KPLSIKYGINVPEFDDEGRIITLEYPEFYLVTVYTPTSGDGLMRLDYRL-EWDEAFGNYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L+K PV+ GD N A+ EID+ P R +AGF+DEER SF N LS VDT+R
Sbjct: 132 KSLDK--PVMACGDFNVANNEIDVPYPDMIRGTAGFSDEERDSFKENLLS-NLVDTYRVL 188
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ + Y++W YR R+ N G RLDY+LVS L DK DS IL D+ GSDH PI L +
Sbjct: 189 NPETIQYSWWSYRGQARENNIGMRLDYWLVSNDLKDKIVDSKILDDIYGSDHCPIMLDIN 248
Query: 182 L 182
+
Sbjct: 249 I 249
>gi|407014279|gb|EKE28316.1| hypothetical protein ACD_3C00079G0002 [uncultured bacterium (gcode
4)]
Length = 255
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/182 (46%), Positives = 114/182 (62%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL VTY L I +HD+E R++T EF+ F+ ++ Y PNS L RL YR WD Y+
Sbjct: 76 KPLEVTYWLWIWEHDNEWRIITLEFEKFYFITVYTPNSKRELNRLEYR-QLWDSLFLDYM 134
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+ LE KPV++ DLN AH+EID+ NP NR +AGFTDEER+ F FL+ GF+DTFR
Sbjct: 135 RRLEVNKPVVVCWDLNVAHKEIDLKNPKPNRWNAGFTDEEREGF-QKFLNAGFIDTFRYF 193
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W R N GWR+DYFL S L D D++I+ + GSDH P+ L +
Sbjct: 194 YPEKTEAYSWWSNFAFARDRNIGWRIDYFLTSWGLKDNLKDAFIMDQILGSDHCPVWLEI 253
Query: 181 KL 182
++
Sbjct: 254 EI 255
>gi|336399679|ref|ZP_08580479.1| exodeoxyribonuclease III Xth [Prevotella multisaccharivorax DSM
17128]
gi|336069415|gb|EGN58049.1| exodeoxyribonuclease III Xth [Prevotella multisaccharivorax DSM
17128]
Length = 267
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 115/186 (61%), Gaps = 8/186 (4%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNS------GDGLRRLSYRITEWDPS 56
PLSV YG+GI +H EGR++T E F+L+ Y PNS G RRL YR+ +W+
Sbjct: 84 PLSVVYGMGIEEHGHEGRVITMEMPEFYLVCVYTPNSQEAETTGGKPRRLPYRM-QWEDD 142
Query: 57 LSSYVKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVD 116
+Y++ L++KKPVI+ GD+N AH+EIDI NP N +AGFTDEER L GF D
Sbjct: 143 FRAYLQALDQKKPVIVCGDMNVAHEEIDIKNPKTNHLNAGFTDEERDKM-TTLLDSGFTD 201
Query: 117 TFRAQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPI 176
+FRA H V Y++W YR R+ N GWR+DYFL S L D + I ++ GSDH PI
Sbjct: 202 SFRALHPDEVTYSWWSYRFRSREHNTGWRIDYFLTSDRLRDHITGASIHTEIYGSDHCPI 261
Query: 177 GLILKL 182
L L L
Sbjct: 262 ELDLDL 267
>gi|116333326|ref|YP_794853.1| exonuclease III [Lactobacillus brevis ATCC 367]
gi|116098673|gb|ABJ63822.1| Exonuclease III [Lactobacillus brevis ATCC 367]
Length = 254
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 116/178 (65%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+V YG+ + D EGR +T E+ F++L+CY PNSG GL+RL +R+ W+ + +++
Sbjct: 72 QPLNVIYGIDAPEFDHEGRAITLEYPDFYVLTCYTPNSGSGLKRLDFRLG-WEHAFLTFI 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
++L+ +KPVI GDLN AH EID+ NP N +AGFTDEER A L+ G+ DTFR
Sbjct: 131 QKLDAQKPVIFCGDLNVAHTEIDLKNPKTNHHNAGFTDEERAKMTA-LLAAGYTDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ V Y++W YR R N GWR+DYF+ SQ L + D+ IL + GSDH P+ L
Sbjct: 190 NPDVTERYSWWSYRFHARDNNAGWRIDYFITSQRLQNHLQDAKILDQIMGSDHCPVEL 247
>gi|290986733|ref|XP_002676078.1| predicted protein [Naegleria gruberi]
gi|284089678|gb|EFC43334.1| predicted protein [Naegleria gruberi]
Length = 340
Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 120/182 (65%), Gaps = 5/182 (2%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
K L+V +G+G HD EGR +T E++ F+L++ Y PNSG L RL YR EWD L Y
Sbjct: 158 KVLNVKFGIGKDKHDLEGRTITVEYEDFYLVNTYCPNSGQNLDRLEYRTKEWDVDLLKYF 217
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKG---FVDTF 118
++LEKKKP+I GDLN A E+DI++P +S GFT EERQS + ++K F+D+F
Sbjct: 218 EKLEKKKPIIWGGDLNVAISEMDIHDPLTLSKSPGFTLEERQS--SPLVTKASPPFIDSF 275
Query: 119 RAQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
R ++ YTY+GY + R +GWR+DYF+ S SL DK +SYIL + GSDH PIGL
Sbjct: 276 RYKNPYKKQYTYYGYINDMRLQKKGWRIDYFVCSNSLKDKIVNSYILEEYFGSDHLPIGL 335
Query: 179 IL 180
I+
Sbjct: 336 II 337
>gi|449017254|dbj|BAM80656.1| probable DNA-(apurinic or apyrimidinic site) lyase [Cyanidioschyzon
merolae strain 10D]
Length = 418
Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 119/205 (58%), Gaps = 27/205 (13%)
Query: 2 KPLSVTYG----LGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSL 57
+P+ V YG LG+ DSEGR++ EF S + S YVPNSG+GL+RL YRI WD ++
Sbjct: 214 EPVRVQYGFDPELGV--EDSEGRVIIVEFSSCVVCSMYVPNSGEGLKRLDYRIRVWDEAV 271
Query: 58 SSYVKELEKK--KPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFV 115
+ +K L + KP+I GDLNCAHQEIDI+NP GNRRSAGFTDEER SF +
Sbjct: 272 RAQLKRLGQGTGKPIIWCGDLNCAHQEIDIWNPEGNRRSAGFTDEERASFSQTLQECALL 331
Query: 116 DTFRAQHRGVVGYTYWGYRHGGRK-TNRGWRLDYFLVSQSLADKFHDSYILPDVTG---- 170
DTFR H V Y+Y GYRH NRGWRLDYF S S A DSYI D+
Sbjct: 332 DTFRWLHPSVRAYSYIGYRHVQNYFQNRGWRLDYFCCSASAAAHIVDSYIRFDIEIYGAA 391
Query: 171 --------------SDHSPIGLILK 181
SDH P+ L+ +
Sbjct: 392 FQQTQVKREEVRRLSDHCPVVLLFR 416
>gi|410460164|ref|ZP_11313847.1| exodeoxyribonuclease III [Bacillus azotoformans LMG 9581]
gi|409927394|gb|EKN64530.1| exodeoxyribonuclease III [Bacillus azotoformans LMG 9581]
Length = 251
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 124/182 (68%), Gaps = 5/182 (2%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKP+SV+YGLG D EGR +T EF SF+L++ Y PNS L RLSYR+ EW+ ++ +Y
Sbjct: 71 IKPISVSYGLGEHMEDHEGRAITLEFPSFYLVNVYTPNSQRDLARLSYRL-EWEDNIRNY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ EL+K KPVIL GDLN AHQEID+ N NR ++GFTDEER+ L GFVD+FR
Sbjct: 130 LLELDKVKPVILCGDLNVAHQEIDLKNYKTNRGNSGFTDEEREKM-TRLLDSGFVDSFRY 188
Query: 121 QH--RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ +G V Y++W Y + R+ N GWR+DYF++S+ L+ DS I ++ GSDH P+ L
Sbjct: 189 LYPDKGDV-YSWWSYMNKVRERNIGWRIDYFILSKGLSSSIIDSQIHTEIMGSDHCPVCL 247
Query: 179 IL 180
L
Sbjct: 248 EL 249
>gi|406893678|gb|EKD38677.1| hypothetical protein ACD_75C00647G0002 [uncultured bacterium]
Length = 500
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 118/178 (66%), Gaps = 2/178 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I P++V YGLG + D EGR++T EF +L++ Y PNS + L RL++++ ++ L Y
Sbjct: 301 IPPVAVRYGLGDPEFDCEGRVLTLEFADCYLINIYFPNSAEKLVRLAHKL-RFNDRLLGY 359
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ELE+KKPVIL GD N AH+EID+ NP N ++AGFT EER ++ +F++ GFVDTFR
Sbjct: 360 ARELEQKKPVILCGDFNVAHKEIDLKNPKTNVKNAGFTPEER-AWMDSFVAAGFVDTFRL 418
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
YT+W YR R N GWR+DYF VS S AD+ + IL +V GSDH P+ L
Sbjct: 419 FCEDPDQYTWWSYRFNARAKNVGWRIDYFCVSGSAADRVRSATILCEVMGSDHCPVAL 476
>gi|421882518|ref|ZP_16313789.1| Exodeoxyribonuclease III [Helicobacter bizzozeronii CCUG 35545]
gi|375315363|emb|CCF81785.1| Exodeoxyribonuclease III [Helicobacter bizzozeronii CCUG 35545]
Length = 250
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 119/177 (67%), Gaps = 3/177 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
P++ TYG+G++ HD EGR+VT E+ +F+L++ YVPNS GL RL YR+ +W+ + ++
Sbjct: 73 PINTTYGIGVAQHDLEGRVVTCEYANFYLVNVYVPNSQRGLLRLDYRL-KWEEAFRQFLA 131
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
+L K V++ GDLN AH+EID+ NP N +AGF+ EER +F + L G +DT+R +
Sbjct: 132 DLMGHKAVVVCGDLNVAHKEIDLKNPESNHHNAGFSPEERHAF-SQLLDLGLIDTYRHFY 190
Query: 123 RGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
G YT+W Y + R N GWR+DYFLVS +L ++ D+ I P + GSDH P+GL
Sbjct: 191 PNQQGIYTWWSYMNEARARNIGWRIDYFLVSHTLQEQLKDALIHPHILGSDHCPVGL 247
>gi|189238676|ref|XP_969559.2| PREDICTED: similar to ap endonuclease [Tribolium castaneum]
Length = 1246
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 82/182 (45%), Positives = 116/182 (63%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+V YG+ +HD+EGR +T E+++FF+++ YVP++G L L R+ +W+ ++
Sbjct: 1067 KPLNVIYGIDSKEHDTEGRCITVEYETFFVVNVYVPHAGRNLVTLPKRL-DWNEQFEKFI 1125
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K L+ +KPVI+ GD+N AH+EID+ NP N SAGF+ EER A FL G+VD +R
Sbjct: 1126 KNLDSQKPVIICGDMNVAHKEIDLANPKTNTNSAGFSVEERDGMTA-FLGNGYVDIYRHL 1184
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R N GWRLDYFLVSQ D D+ I DV GSDH P+ L +
Sbjct: 1185 YPEKEKAYTFWIYMRNARPNNVGWRLDYFLVSQRFVDNVCDNIIHSDVMGSDHCPLSLHI 1244
Query: 181 KL 182
++
Sbjct: 1245 QI 1246
>gi|395244503|ref|ZP_10421467.1| Exodeoxyribonuclease III [Lactobacillus hominis CRBIP 24.179]
gi|394483150|emb|CCI82475.1| Exodeoxyribonuclease III [Lactobacillus hominis CRBIP 24.179]
Length = 265
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 119/183 (65%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPL+V G+G+S+ D +GR +T E+ +F+ ++ YVP SG+ L+RL +RI WD + Y
Sbjct: 82 IKPLAVANGIGVSEFDQQGRTITLEYPNFYFVTTYVPFSGEQLQRLDFRIA-WDQAFRKY 140
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ +LE KPVI+ GD++ AH+ ID+ P+ N AGFT++ER F L+ GF DTFR
Sbjct: 141 LLKLEANKPVIIGGDMSVAHEPIDLAQPSENHHHAGFTEQERDDF-TKLLNSGFTDTFRY 199
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
H Y+YW YR+ GR+ N GWRLDY LVS SL K + IL ++ GSDH P+ L
Sbjct: 200 LHPNEKDIYSYWSYRYHGREKNEGWRLDYILVSNSLDSKIKKANILTEIPGSDHCPVSLE 259
Query: 180 LKL 182
+ +
Sbjct: 260 MDI 262
>gi|335430178|ref|ZP_08557073.1| exodeoxyribonuclease III Xth [Haloplasma contractile SSD-17B]
gi|334888594|gb|EGM26891.1| exodeoxyribonuclease III Xth [Haloplasma contractile SSD-17B]
Length = 251
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 120/181 (66%), Gaps = 2/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+V YG+ S ++ EGR++T EF +FF ++ YVPNS L RL YR+ E++ +Y+
Sbjct: 72 KPLNVVYGIDGSKYNDEGRIITLEFKNFFFVTAYVPNSQRSLARLDYRM-EFEDDFRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K+L+ KPVI+ GDLN AH+EID+ NP N ++AGFT EER+ + + L +GF D++R
Sbjct: 131 KKLDSLKPVIMCGDLNVAHREIDLTNPKNNEKNAGFTIEERRKYQS-LLDEGFTDSYRYL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
H V Y++W Y RK N GWR+DYF++S L + +DS I GSDH PI L ++
Sbjct: 190 HPEKVEYSWWSYMFNARKRNIGWRIDYFVISNKLRGQLNDSIIHTQTEGSDHCPISLDIE 249
Query: 182 L 182
+
Sbjct: 250 V 250
>gi|171915906|ref|ZP_02931376.1| exodeoxyribonuclease III [Verrucomicrobium spinosum DSM 4136]
Length = 250
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 109/172 (63%), Gaps = 2/172 (1%)
Query: 9 GLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKK 68
G+GI +HD EGR++T EF +++++ Y PN+ L RL YR+ WD + Y+K LE+ K
Sbjct: 80 GMGIDEHDKEGRVITVEFPDYYVVNVYTPNAQAELARLPYRLL-WDDAFRLYLKNLEQTK 138
Query: 69 PVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVGY 128
PV+ GDLN AH EIDI P NR S GF+D+ER SFG L GFVDTFR Y
Sbjct: 139 PVLACGDLNVAHNEIDIARPKENRFSPGFSDQERASFG-KLLESGFVDTFRHFDSRPHQY 197
Query: 129 TYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
++W YR R N GWR+DY+L SQ L D S I PD+ GSDH P+ L++
Sbjct: 198 SWWSYRANARGNNVGWRIDYWLASQGLKDGLKSSIIRPDIHGSDHCPVELVM 249
>gi|227874120|ref|ZP_03992326.1| exodeoxyribonuclease III [Oribacterium sinus F0268]
gi|227840032|gb|EEJ50456.1| exodeoxyribonuclease III [Oribacterium sinus F0268]
Length = 254
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 121/182 (66%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YG+G+ +HD EGR++T E+ F+L++ YVPNS L+RL YR+ +++ + +Y+
Sbjct: 75 EPLSVQYGIGVEEHDQEGRVITLEYPEFYLITVYVPNSQGELKRLPYRM-KFEDAFLNYI 133
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
LEKKKPVI GDLN AH+EID+ NP N +AGF+DEER F + L G++D+FR
Sbjct: 134 LTLEKKKPVIYCGDLNVAHEEIDLKNPDSNHMNAGFSDEERAKF-SRVLDSGYLDSFRHF 192
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W YR R N GWR+DYF+VS+ L K + I +V GSDH P+ + L
Sbjct: 193 YPNKEEEYSWWSYRTKARDRNVGWRIDYFVVSKQLEKKLLSASIHQEVMGSDHCPVEITL 252
Query: 181 KL 182
L
Sbjct: 253 DL 254
>gi|322392394|ref|ZP_08065855.1| exodeoxyribonuclease [Streptococcus peroris ATCC 700780]
gi|321144929|gb|EFX40329.1| exodeoxyribonuclease [Streptococcus peroris ATCC 700780]
Length = 275
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 112/172 (65%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S DSEGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+KKKPV+
Sbjct: 106 STMDSEGRIITLEFDTFFVTQVYTPNAGDGLKRLEERQV-WDIKYAEYLAELDKKKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA N RS GFTDEER+ F N L+KGF DTFR H V YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNHRSPGFTDEEREGF-TNLLAKGFTDTFRHVHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L +KL
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGPRQDHTPIVLEIKL 275
>gi|225016166|ref|ZP_03705370.1| hypothetical protein CLOSTMETH_00081 [Clostridium methylpentosum
DSM 5476]
gi|224951039|gb|EEG32248.1| hypothetical protein CLOSTMETH_00081 [Clostridium methylpentosum
DSM 5476]
Length = 253
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/182 (46%), Positives = 115/182 (63%), Gaps = 3/182 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I P+SV YG+GI + D+EGR++T EF+ F L++ Y PN+ GL R+ +R+ +W+ + Y
Sbjct: 71 IPPVSVAYGIGIPEFDTEGRVITVEFEKFTLINVYTPNAQRGLTRIDFRM-QWEDAFRVY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ L++ KPV++ GDLN AH EID+ N NR +AGF+DEER L G D+FR
Sbjct: 130 LLRLQESKPVVVCGDLNVAHNEIDLKNYKTNRGNAGFSDEERGKM-TELLQSGLTDSFRY 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ G YT+W Y R N GWR+DYFL S L D+ DS I +V GSDH PIGL
Sbjct: 189 LYPEKTGCYTWWSYMFNARANNAGWRIDYFLTSDVLKDQIEDSVIYSEVLGSDHCPIGLF 248
Query: 180 LK 181
L+
Sbjct: 249 LR 250
>gi|336452587|ref|YP_004607053.1| exodeoxyribonuclease III [Helicobacter bizzozeronii CIII-1]
gi|335332614|emb|CCB79341.1| exodeoxyribonuclease III [Helicobacter bizzozeronii CIII-1]
Length = 251
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 118/177 (66%), Gaps = 3/177 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
P++ TYG+G++ HD EGR+VT E+ F+L++ YVPNS GL RL YR+ +W+ + ++
Sbjct: 74 PINTTYGIGVAQHDLEGRVVTCEYADFYLVNVYVPNSQRGLLRLDYRL-KWEEAFRRFLA 132
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
+L K V++ GDLN AH+EID+ NP N +AGF+ EER +F + L G +DT+R +
Sbjct: 133 DLMGHKAVVVCGDLNVAHKEIDLKNPESNHHNAGFSPEERHAF-SQLLDLGLIDTYRHFY 191
Query: 123 RGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
G YT+W Y + R N GWR+DYFLVS +L ++ D+ I P + GSDH P+GL
Sbjct: 192 PNQQGIYTWWSYMNEARARNIGWRIDYFLVSHTLQEQLKDALIHPHILGSDHCPVGL 248
>gi|150388422|ref|YP_001318471.1| exodeoxyribonuclease III Xth [Alkaliphilus metalliredigens QYMF]
gi|149948284|gb|ABR46812.1| exodeoxyribonuclease III Xth [Alkaliphilus metalliredigens QYMF]
Length = 251
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/182 (46%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP+SV YG+G + + EGR++T EFD F+L++ Y PNS GL RL R+ W+ +++
Sbjct: 72 KPISVKYGVGEEEDEEEGRVLTLEFDQFYLVNVYTPNSKRGLERLDGRMI-WEDEFRAHL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
KEL+ KPVIL GDLN AH+EID+ NP N++SAGFT+EER+ L+ GF+D+FR
Sbjct: 131 KELDAIKPVILCGDLNVAHEEIDLKNPKSNKKSAGFTNEEREKM-TELLTSGFIDSFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ + G Y++W Y R+ N GWR+DYF+VS+ L ++ ++ I P + GSDH P+ L L
Sbjct: 190 YPDLEGAYSWWSYMGKARERNAGWRIDYFVVSERLKNQLKEAAIHPQIMGSDHCPVVLEL 249
Query: 181 KL 182
+
Sbjct: 250 DI 251
>gi|81428949|ref|YP_395949.1| exodeoxyribonuclease III [Lactobacillus sakei subsp. sakei 23K]
gi|78610591|emb|CAI55642.1| Exodeoxyribonuclease III [Lactobacillus sakei subsp. sakei 23K]
Length = 254
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 114/178 (64%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYG+ +HD EGR++T E+ FFL++CY PNS + L+RL YR+T W+ + +YV
Sbjct: 72 EPLNVTYGIQQPEHDHEGRVITLEYPQFFLITCYTPNSQNQLKRLDYRMT-WENAFRAYV 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
++L +KPVI GDLN AH+ ID+ N N +SAGF+DEER L GF DTFR
Sbjct: 131 QQLGTQKPVIFCGDLNVAHEAIDLKNDRTNHKSAGFSDEERVQM-TTLLQSGFTDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ Y++W YR R N GWR+DYF+ S L K D+ I ++ GSDH P+ L
Sbjct: 190 YPDQTDIYSWWSYRFHARDNNAGWRIDYFITSDELQPKLMDAKIHTEIYGSDHCPVEL 247
>gi|441499473|ref|ZP_20981659.1| Exodeoxyribonuclease III [Fulvivirga imtechensis AK7]
gi|441437006|gb|ELR70364.1| Exodeoxyribonuclease III [Fulvivirga imtechensis AK7]
Length = 258
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 115/182 (63%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL +TY LG +HD EGR++TAEFD FFL++ Y PNSG GL RL YR WD +++
Sbjct: 79 EPLDITYDLGHEEHDQEGRVITAEFDHFFLVNVYTPNSGQGLNRLEYR-QAWDVIFLNHL 137
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGN-RRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ LE++KPV+L GDLN AH+EIDI N +SAG+T +E F + +L GFVDTFR
Sbjct: 138 RSLEQRKPVVLCGDLNVAHEEIDIARAKQNYNKSAGYTQQEIDGFKS-YLEHGFVDTFRH 196
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
V YTYW R N GWR+DYFLVS +L + + I GSDH P+ L+L
Sbjct: 197 FFPEEVKYTYWNQMFNSRARNVGWRIDYFLVSPALLGQVKTAAIHDQFHGSDHCPVELVL 256
Query: 181 KL 182
L
Sbjct: 257 YL 258
>gi|221194898|ref|ZP_03567954.1| exodeoxyribonuclease III [Atopobium rimae ATCC 49626]
gi|221184801|gb|EEE17192.1| exodeoxyribonuclease III [Atopobium rimae ATCC 49626]
Length = 281
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/182 (46%), Positives = 113/182 (62%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL V +G D+EGR+ EFD F+ + Y PNS + L RL R+ WD ++
Sbjct: 102 EPLQVIRQIGSPVADNEGRVCALEFDRFWFVDVYTPNSKEQLARLDERLV-WDERYRDFI 160
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL +KP+I GD N AH EID+ NP+ N ++AGF+DEER+SF L GF DTFR +
Sbjct: 161 AELSAQKPLITCGDFNVAHTEIDLKNPSSNHKNAGFSDEERESF-TKLLDAGFTDTFRYR 219
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
H V G Y++W YR RK N GWR+DYFLVS +A + + IL +V GSDH P+ L +
Sbjct: 220 HPDVTGAYSWWSYRFNARKNNAGWRIDYFLVSNRIAQQITGAAILNEVYGSDHCPVELTI 279
Query: 181 KL 182
+L
Sbjct: 280 EL 281
>gi|346986376|ref|NP_001231340.1| DNA-(apurinic or apyrimidinic site) lyase [Cricetulus griseus]
gi|4106095|gb|AAD02702.1| apurinic/apyrimidinic endonuclease [Cricetulus griseus]
gi|344257035|gb|EGW13139.1| DNA-(apurinic or apyrimidinic site) lyase [Cricetulus griseus]
Length = 317
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 116/181 (64%), Gaps = 2/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V+YG+G +HD EGR++ AEFDSF L++ YVPN+G GL RL YR WD + ++K
Sbjct: 138 PLKVSYGIGEEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYR-QRWDKAFCKFLK 196
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
+L +KP++L GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR +
Sbjct: 197 DLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLTDSFRHLY 256
Query: 123 RGV-VGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y R N GWRLDYFL+S SL DS I GSDH PI L L
Sbjct: 257 PNTPYAYTFWTYMMNARAKNVGWRLDYFLLSHSLLSSLCDSKIRSKALGSDHCPITLYLA 316
Query: 182 L 182
L
Sbjct: 317 L 317
>gi|406897912|gb|EKD41704.1| hypothetical protein ACD_73C00569G0001 [uncultured bacterium]
Length = 250
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 116/180 (64%), Gaps = 2/180 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++P++ G+GI +HD+EGR++T EF ++L++ Y PN+ L RL YR+ +WD +Y
Sbjct: 72 VQPIASQLGIGIEEHDNEGRVITLEFSDYYLVNVYTPNAQRELTRLDYRM-KWDADFLNY 130
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K+LE KPVI GDLN AH+EID+ NP N+ +AGFT +ER F + L GFVDTFR
Sbjct: 131 LKKLESHKPVIFCGDLNVAHKEIDLANPKTNQGNAGFTPQERDGF-SKILESGFVDTFRL 189
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y G R N GWR+DYF S +L +K S I V GSDH P+ L++
Sbjct: 190 FNNSGGFYTWWSYMAGARPRNIGWRIDYFCTSYNLKNKVKSSAIHAQVMGSDHCPVELVV 249
>gi|408907629|emb|CCM11287.1| Exodeoxyribonuclease III [Helicobacter heilmannii ASB1.4]
Length = 251
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 119/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YG+GI++HD EGR+V E+ F+L++ YVPN+ GL RL YR++ W+ + ++
Sbjct: 72 EPLSVRYGIGIAEHDLEGRVVVCEYSQFYLVNVYVPNAQRGLLRLPYRLS-WEKAFRGFL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L K V++ GDLN AH EID+ NP NR +AGF+D ER +F A L +GF+DT+R
Sbjct: 131 SGLVAHKGVLVCGDLNVAHTEIDLTNPQANRYNAGFSDPERHAFSA-LLQEGFIDTYRHF 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ YT+W Y R+ N GWR+DYFL SQ+L D +++I + GSDH P+GL L
Sbjct: 190 YPEQKEAYTWWSYIGQARERNVGWRIDYFLASQNLQDTLKNAHIYTHIFGSDHCPVGLEL 249
>gi|417936679|ref|ZP_12579986.1| exodeoxyribonuclease III [Streptococcus infantis X]
gi|343400195|gb|EGV12715.1| exodeoxyribonuclease III [Streptococcus infantis X]
Length = 275
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 113/172 (65%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S DSEGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ +L+K+KPV+
Sbjct: 106 STMDSEGRIITLEFDTFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAQLDKQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER+ F N L+KGF DTFR H V YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEEREGF-TNLLAKGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVLEIEL 275
>gi|406931444|gb|EKD66730.1| hypothetical protein ACD_49C00017G0002 [uncultured bacterium (gcode
4)]
Length = 255
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 118/183 (64%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
IKPLSV+Y L +++HD E R++T EF++F+ ++ Y PN+ L RL YR WD Y
Sbjct: 75 IKPLSVSYWLWLAEHDEEWRIITLEFENFYFVNVYTPNAKRELERLDYR-QLWDSLFLDY 133
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+K LE+ KPVI D N AHQEID+ NP N+ +AGFT EER+ F + F+S GF+DTFR
Sbjct: 134 LKRLEQNKPVITCWDFNVAHQEIDLTNPKTNKWNAGFTPEEREWF-SKFISSGFIDTFRY 192
Query: 121 QH-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ Y++W R N GWR+DYFL+S +L +K ++I +V SDH P+G+
Sbjct: 193 FYPDKTWEYSWWSNFANSRARNIGWRIDYFLISNTLKNKLKSAFIKQEVRWSDHCPVGIE 252
Query: 180 LKL 182
++L
Sbjct: 253 IEL 255
>gi|145355749|ref|XP_001422113.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582353|gb|ABP00430.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 273
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 110/169 (65%), Gaps = 2/169 (1%)
Query: 16 DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKK-KPVILTG 74
D EGR++TAE DS F+++ YVPNSG L+RL R+ W+ ++ +V+ LE + K VI G
Sbjct: 105 DDEGRVLTAELDSCFVVNAYVPNSGADLKRLPERVEVWERAIREHVRALESRGKAVIYCG 164
Query: 75 DLNCAHQEIDIYNP-AGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVGYTYWGY 133
DLN AH+EID++ A N +SAGFT EER + VDTFRA +TYW Y
Sbjct: 165 DLNVAHEEIDLWGRHAENSKSAGFTPEERAAMTRLLEECDLVDTFRAHRPDARAFTYWSY 224
Query: 134 RHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R G R+ NRGWRLDY L S+ LAD D+Y LPDV GSDH P+GL + L
Sbjct: 225 RAGAREKNRGWRLDYILASRRLADSIVDAYALPDVLGSDHCPVGLRVAL 273
>gi|332687227|ref|YP_004457001.1| exodeoxyribonuclease III [Melissococcus plutonius ATCC 35311]
gi|332371236|dbj|BAK22192.1| exodeoxyribonuclease III [Melissococcus plutonius ATCC 35311]
Length = 254
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/179 (46%), Positives = 118/179 (65%), Gaps = 3/179 (1%)
Query: 5 SVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKEL 64
V YGL + +HD EGRL+T E+ +F+L++CY PNS L+RL+YR+T W+ + Y+ +L
Sbjct: 75 KVYYGLNMEEHDQEGRLLTLEYPNFYLVNCYTPNSQPELKRLAYRMT-WENAFRDYLIKL 133
Query: 65 EKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRG 124
+ KK VIL GDLN AHQ ID+ N N+ SAGF+ EER+ L GF+DT+R +
Sbjct: 134 KSKKQVILCGDLNVAHQPIDLKNWRTNQHSAGFSPEEREKM-TKLLDNGFIDTYRYFYPD 192
Query: 125 VVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
G Y++W YR RK N GWR+DYF+VS +L ++ I ++TGSDH P+G+ L L
Sbjct: 193 KEGVYSWWSYRFNARKNNAGWRIDYFIVSDNLKPTLKEATIYTEITGSDHCPVGVELDL 251
>gi|329895423|ref|ZP_08271004.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC3088]
gi|328922306|gb|EGG29652.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC3088]
Length = 256
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 116/179 (64%), Gaps = 3/179 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++P+SVT +G+ +HD+EGR++ AEF++F+L++ Y PNSG L+RL YR WD + Y
Sbjct: 75 VEPISVTADMGMPEHDTEGRVLCAEFETFYLVTVYTPNSGSELKRLDYR-QSWDKDFADY 133
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGN-RRSAGFTDEERQSFGANFLSKGFVDTFR 119
+K LE+ KPV++ GDLN AHQ+ID+ P N +SAG+ E F + GFVDT+R
Sbjct: 134 LKTLEQTKPVVVCGDLNVAHQDIDLARPKQNYNKSAGYMQAEIDGFD-RLVDLGFVDTYR 192
Query: 120 AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ Y++W YR G R+ N GWR+DYFLV+ L + I DV GSDH P+G+
Sbjct: 193 HFNPNTAKYSWWSYRAGAREKNIGWRIDYFLVTPELTSSLTGAEIYNDVYGSDHCPVGI 251
>gi|256827574|ref|YP_003151533.1| exodeoxyribonuclease III [Cryptobacterium curtum DSM 15641]
gi|256583717|gb|ACU94851.1| exodeoxyribonuclease III [Cryptobacterium curtum DSM 15641]
Length = 262
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 118/193 (61%), Gaps = 14/193 (7%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL V +GLG+ D+EGR+ EF F+ + Y PN+ + L R+ +R+ EWD + +
Sbjct: 72 KPLQVLHGLGVPHLDTEGRICALEFPEFWFVDVYTPNAQNELARIDHRM-EWDDAFRDFC 130
Query: 62 KELEK-----------KKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFL 110
K LEK KPVI+ GD N AH+EID+ NP NR +AGF+DEER+ F L
Sbjct: 131 KGLEKGTTPLGPDTAQPKPVIMCGDFNVAHEEIDLKNPKSNRGNAGFSDEEREKF-TKLL 189
Query: 111 SKGFVDTFRAQHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVT 169
GFVDTFR + VG Y++W YR R N GWR+DYFLVS+SLAD+ + I D+
Sbjct: 190 DAGFVDTFRLLNPTEVGAYSWWSYRFNARANNAGWRIDYFLVSKSLADRVRAARIHADLF 249
Query: 170 GSDHSPIGLILKL 182
GSDH P+ L + L
Sbjct: 250 GSDHCPVSLDIDL 262
>gi|308233639|ref|ZP_07664376.1| exodeoxyribonuclease III Xth [Atopobium vaginae DSM 15829]
gi|328944401|ref|ZP_08241863.1| exodeoxyribonuclease III [Atopobium vaginae DSM 15829]
gi|327490985|gb|EGF22762.1| exodeoxyribonuclease III [Atopobium vaginae DSM 15829]
Length = 259
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 116/182 (63%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPLS + +G D+EGR+ EF+ F+ + Y PNS + L RL R+ EWD + ++
Sbjct: 80 KPLSTIHTIGCKAADNEGRVCALEFEKFWFVDVYTPNSKNELARLDERM-EWDKAYREFL 138
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L+ +KPVI GD N AHQEID+ NPA N +AGF+DEER F ++ L GF DTFR+
Sbjct: 139 VGLDAQKPVITCGDFNVAHQEIDLKNPASNHENAGFSDEERAGF-SSLLGAGFTDTFRSA 197
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
H + G Y++W YR R+ N GWR+DYFLVS +A+ S I ++ GSDH P+GL L
Sbjct: 198 HPTLEGAYSWWSYRMRSRERNAGWRIDYFLVSNRIANTVTSSAIYNEIYGSDHCPVGLEL 257
Query: 181 KL 182
+L
Sbjct: 258 EL 259
>gi|366053865|ref|ZP_09451587.1| exodeoxyribonuclease III [Lactobacillus suebicus KCTC 3549]
Length = 256
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 82/182 (45%), Positives = 115/182 (63%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+ + G+GI + D EGR++T E+ SF+L++CY PNSG L+RL +R W+ + Y+
Sbjct: 73 KPLNASLGIGIDEFDHEGRVITLEYPSFYLITCYTPNSGQQLKRLDFR-QNWNKAFLDYI 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L KK VI GDLN AH+ ID+ NP+ N +AGFTDEER F + L FVDT+R
Sbjct: 132 NQLSAKKDVIFCGDLNVAHETIDLKNPSSNHHAAGFTDEERNDF-THLLESNFVDTYRHF 190
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ V Y++W YR R N GWR+DYF+ S L D+ D+ I ++ GSDH P+ L
Sbjct: 191 YPEVTEQYSWWSYRFHSRDRNAGWRIDYFVTSTGLTDQLVDAKIHSEIFGSDHCPVELTA 250
Query: 181 KL 182
+
Sbjct: 251 NI 252
>gi|226228755|ref|YP_002762861.1| exodeoxyribonuclease III [Gemmatimonas aurantiaca T-27]
gi|226091946|dbj|BAH40391.1| exodeoxyribonuclease III [Gemmatimonas aurantiaca T-27]
Length = 265
Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 114/194 (58%), Gaps = 14/194 (7%)
Query: 2 KPLSVTYGLGIS-------------DHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSY 48
+PLSVT G + D ++EGR++TAEF+ FF+++ Y PN+ D L RL
Sbjct: 73 EPLSVTNGFAKAVAKKYTLVDDAGRDSETEGRVITAEFEKFFVVTVYTPNAKDDLSRLPL 132
Query: 49 RITEWDPSLSSYVKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGAN 108
R WD + ++ K LE KKPV+ GDLN AH E+D+ NP NR GFTDEERQ F +
Sbjct: 133 RSQHWDAAFLAHCKALEMKKPVVFCGDLNVAHTELDLANPKPNRGRKGFTDEERQGF-QS 191
Query: 109 FLSKGFVDTFRAQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDV 168
FL GFVDT R H+G Y++W + R N GWR+DY LVS +L + I DV
Sbjct: 192 FLDAGFVDTLRMFHQGNGHYSWWSHFANSRARNVGWRIDYVLVSAALQKSVATAEIHADV 251
Query: 169 TGSDHSPIGLILKL 182
GSDH P+ + L L
Sbjct: 252 MGSDHCPVSVTLSL 265
>gi|354806768|ref|ZP_09040248.1| exodeoxyribonuclease III [Lactobacillus curvatus CRL 705]
gi|354514743|gb|EHE86710.1| exodeoxyribonuclease III [Lactobacillus curvatus CRL 705]
Length = 254
Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 114/178 (64%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+ TYG+G +HD EGR++T E+ +F+L++CY PNS D L+RL YR+ W+ + +Y+
Sbjct: 72 KPLTATYGIGQPEHDQEGRVITLEYPTFYLITCYTPNSQDKLKRLDYRM-RWENAFQTYI 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L +KPVI GDLN AH+ ID+ N N +AGF+DEER L++GF DTFR
Sbjct: 131 ADLSTQKPVIFCGDLNVAHEPIDLKNDKTNHHNAGFSDEERGQM-TTLLNRGFTDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ Y++W YR R N GWR+DYF+ S L K D+ I ++ GSDH P+ L
Sbjct: 190 YPDQPDIYSWWSYRFHARDNNAGWRIDYFITSNDLQPKLVDAKIHTEIFGSDHCPVEL 247
>gi|406894390|gb|EKD39215.1| hypothetical protein ACD_75C00473G0002 [uncultured bacterium]
Length = 484
Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 118/178 (66%), Gaps = 2/178 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+ P +V YG+G + D EGR++T EF +L++ Y PNS + L+RL Y++ ++ L ++
Sbjct: 301 LAPAAVRYGMGDPEFDCEGRVLTLEFADCYLINIYFPNSAEELKRLDYKL-RFNNRLLAF 359
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
KELE++KPVIL GD N AH+EID+ NP N ++AGFT EER ++ +F++ GFVDTFR
Sbjct: 360 AKELEQRKPVILCGDFNVAHKEIDLKNPKANEKNAGFTPEER-AWMDSFVAAGFVDTFRL 418
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
++ YT+W YR R N GWR+DYF VS + + + IL +V GSDH P+ L
Sbjct: 419 FNQDPGQYTWWSYRFNARAKNVGWRIDYFCVSGAACARVKSATILDEVMGSDHCPVAL 476
>gi|297618884|ref|YP_003706989.1| exodeoxyribonuclease III Xth [Methanococcus voltae A3]
gi|297377861|gb|ADI36016.1| exodeoxyribonuclease III Xth [Methanococcus voltae A3]
Length = 249
Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 114/179 (63%), Gaps = 3/179 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP ++TYG+ + D EGR++TAE+D+++L++ Y PNS GL RL YR+ +WD Y+
Sbjct: 72 KPKNITYGMD-NFPDEEGRVITAEYDNYYLVNVYTPNSQRGLTRLDYRM-KWDTKFLEYL 129
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L + KP+I GDLN AH+EID+ NP N++ AGFT+EER F ++ FVDTFR
Sbjct: 130 LSLNESKPLIFCGDLNVAHKEIDLKNPKTNKKHAGFTEEERMGFDK-YVENNFVDTFRLF 188
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
++ YT+W Y H R N GWR+DYF S S+ + S IL + GSDH PI L L
Sbjct: 189 NKESDNYTWWSYMHNARAKNIGWRIDYFCTSNSIVNYVKKSVILDKIYGSDHCPIKLEL 247
>gi|89097572|ref|ZP_01170461.1| Exodeoxyribonuclease III [Bacillus sp. NRRL B-14911]
gi|89087868|gb|EAR66980.1| Exodeoxyribonuclease III [Bacillus sp. NRRL B-14911]
Length = 251
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 119/182 (65%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL V+YG+ + + EGR +T EF++F+LL+ Y PNS L RL YR+ EW+ + Y+
Sbjct: 72 KPLYVSYGIAGRETEPEGRSLTLEFENFYLLNVYTPNSKRDLARLPYRL-EWEDEIREYI 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
ELE+KKPVIL GDLN AH +ID+ N NR ++GFTDEER + LS+GFVD+FR
Sbjct: 131 LELEQKKPVILCGDLNVAHLDIDLKNARSNRGNSGFTDEERGKM-TSLLSEGFVDSFRYL 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G YT+W Y R+ N GWR+DYF+VS L + DS I D+ GSDH PI L +
Sbjct: 190 YPEQEGAYTWWSYMAKVRERNIGWRIDYFIVSDKLKEHILDSKIYCDIMGSDHCPIMLEM 249
Query: 181 KL 182
L
Sbjct: 250 AL 251
>gi|403376604|gb|EJY88283.1| Exodeoxyribonuclease III family protein [Oxytricha trifallax]
Length = 318
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 116/184 (63%), Gaps = 3/184 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+KPL V + LGIS HD+EGR++TAE++ F L+ YVPN+GDGL+RL YR EWD Y
Sbjct: 100 VKPLRVDFDLGISKHDNEGRVITAEYNKFVLIGVYVPNAGDGLKRLDYRTQEWDNDFHDY 159
Query: 61 VK--ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTF 118
+ ++E+ KPVILTGDLN A E D+Y+ G + AG+T ER + F +G++DT+
Sbjct: 160 IDRIKVERGKPVILTGDLNVARNEQDVYDTKGKDKVAGYTPNERGNI-ERFFDRGYIDTY 218
Query: 119 RAQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
R H YT++ YR GR+ + GWRLDYF+V + + D I GSDH PI L
Sbjct: 219 RHLHPEKEEYTFFSYRISGRENDMGWRLDYFIVDKDNINMVVDKRIHKVFDGSDHVPIEL 278
Query: 179 ILKL 182
+ L
Sbjct: 279 EIDL 282
>gi|302830584|ref|XP_002946858.1| hypothetical protein VOLCADRAFT_56112 [Volvox carteri f.
nagariensis]
gi|300267902|gb|EFJ52084.1| hypothetical protein VOLCADRAFT_56112 [Volvox carteri f.
nagariensis]
Length = 355
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 113/171 (66%), Gaps = 17/171 (9%)
Query: 2 KPLSVTYGLGIS---------------DHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRL 46
+PLSVT GLG +H+ EGR+VT E + F+++ YVPNSG+GL+RL
Sbjct: 97 RPLSVTVGLGAGGGSTSSPDSDPDPDSEHEVEGRVVTVELEEAFVVNVYVPNSGEGLKRL 156
Query: 47 SYRITEWDPSLSSYVKELEKK-KPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSF 105
YRI WD + + YVK LE + KPVI+TGDLNCAH+EIDI+ P N RSAGFT EER+SF
Sbjct: 157 DYRINRWDGAFAKYVKGLESRGKPVIVTGDLNCAHKEIDIHAPKTNLRSAGFTVEERESF 216
Query: 106 GANFLSK-GFVDTFRAQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSL 155
G L + G VDTFR V YTY+ R R+ N+GWRLDYFL S++L
Sbjct: 217 GRLLLGEVGLVDTFRELFPCTVAYTYFTRRFNCREQNKGWRLDYFLTSRAL 267
>gi|349603618|gb|AEP99410.1| DNA-(apurinic or apyrimidinic site) lyase-like protein, partial
[Equus caballus]
Length = 171
Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 83/171 (48%), Positives = 107/171 (62%), Gaps = 2/171 (1%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
+HD EGR++ AEFD+F L++ YVPN+G GL RL YR WD + ++K L +KP++L
Sbjct: 2 EEHDQEGRVIVAEFDAFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLKGLASRKPLVL 60
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVV-GYTYW 131
GDLN AH+EID+ NP GN+++AGFT +ERQ FG + D+FR + YT+W
Sbjct: 61 CGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTAYAYTFW 120
Query: 132 GYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
Y R N GWRLDYFL+S SL DS I GSDH PI L L L
Sbjct: 121 TYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL 171
>gi|347534242|ref|YP_004840912.1| Exodeoxyribonuclease [Lactobacillus sanfranciscensis TMW 1.1304]
gi|345504298|gb|AEN98980.1| Exodeoxyribonuclease [Lactobacillus sanfranciscensis TMW 1.1304]
Length = 283
Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 115/180 (63%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL V GL +D D EGR +T E+ +F+L++ Y P +G+ L+RL+++ EWD L ++V
Sbjct: 100 QPLKVMLGLDGNDQDPEGRAITLEYPNFYLVNVYAPAAGEELQRLTFK-EEWDQKLITFV 158
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+ KPVI+ GDLN AH+ IDIY P +R +AGFTD ERQ L GF D +RA
Sbjct: 159 DKLKATKPVIINGDLNIAHEPIDIYAPEEHRHAAGFTDAERQQM-TQLLDSGFTDIYRAT 217
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
H YT+W YR R+ N GWRLDYF++S +L + I+ V+GSDH P+ LIL
Sbjct: 218 HPDEPNKYTWWSYRDHARRDNHGWRLDYFIISNNLVKDVKITTIMDTVSGSDHCPLQLIL 277
>gi|385260230|ref|ZP_10038379.1| exodeoxyribonuclease III [Streptococcus sp. SK140]
gi|385192150|gb|EIF39560.1| exodeoxyribonuclease III [Streptococcus sp. SK140]
Length = 275
Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 112/172 (65%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDTFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER+ F N L+KGF DTFR H V YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEEREGF-TNLLAKGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVLEIEL 275
>gi|335029062|ref|ZP_08522574.1| exodeoxyribonuclease III [Streptococcus infantis SK1076]
gi|334269463|gb|EGL87880.1| exodeoxyribonuclease III [Streptococcus infantis SK1076]
Length = 275
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 112/172 (65%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDTFFVTQVYTPNAGDGLKRLEERQI-WDVKYAEYLAELDKQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER+ F N L+KGF DTFR H V YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEEREGF-TNLLAKGFTDTFRHVHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHAPIVLEIEL 275
>gi|379705791|ref|YP_005204250.1| exodeoxyribonuclease [Streptococcus infantarius subsp. infantarius
CJ18]
gi|374682490|gb|AEZ62779.1| exodeoxyribonuclease [Streptococcus infantarius subsp. infantarius
CJ18]
Length = 275
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 111/169 (65%), Gaps = 4/169 (2%)
Query: 16 DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVILTGD 75
DSEGR++T EFD+F++ Y PN+GDGL+RL+ R WD + Y+ EL++KKPV+ TGD
Sbjct: 109 DSEGRIITLEFDNFYVTQVYTPNAGDGLKRLAER-QLWDEKYAQYLAELDQKKPVLATGD 167
Query: 76 LNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYWGYR 134
N AHQEID+ NP NRRSAGFTDEER F N L+KGF DTFR H + Y++W R
Sbjct: 168 YNVAHQEIDLANPNSNRRSAGFTDEERAGF-TNLLAKGFTDTFRHLHGNIPNVYSWWAQR 226
Query: 135 HGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 227 SKTSKINNTGWRIDYWLTSNRIADKVTKSEMIDSGARQDHTPILLEIDL 275
>gi|406659471|ref|ZP_11067609.1| exodeoxyribonuclease III [Streptococcus iniae 9117]
gi|405577580|gb|EKB51728.1| exodeoxyribonuclease III [Streptococcus iniae 9117]
Length = 275
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 113/169 (66%), Gaps = 4/169 (2%)
Query: 16 DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVILTGD 75
DSEGR++T EFD +F+ Y PN+GD L+RL R WD + ++Y+ +L+++KPV+ TGD
Sbjct: 109 DSEGRIITLEFDDYFVTQVYTPNAGDALKRLEDR-QAWDIAYANYLVKLDQQKPVLATGD 167
Query: 76 LNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYWGYR 134
N AH+EID+ NPA NRRSAGFTDEERQ F N LSKGF DTFR H + YT+W R
Sbjct: 168 YNVAHEEIDLANPASNRRSAGFTDEERQGF-TNLLSKGFTDTFRHLHGNIPNVYTWWAQR 226
Query: 135 HGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
K N GWR+DY+L S LADK S ++ + DH+PI L + L
Sbjct: 227 SKTSKINNTGWRIDYWLTSNRLADKIIRSEMIDSGSRQDHTPILLEIDL 275
>gi|223985143|ref|ZP_03635238.1| hypothetical protein HOLDEFILI_02544 [Holdemania filiformis DSM
12042]
gi|223962889|gb|EEF67306.1| hypothetical protein HOLDEFILI_02544 [Holdemania filiformis DSM
12042]
Length = 252
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 120/183 (65%), Gaps = 4/183 (2%)
Query: 2 KPLSVTYGLGISD--HDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSS 59
KPLSV Y ++ H EGR++T EF+ F+ ++ YVPNS + L RL YR+ +W+ +++
Sbjct: 72 KPLSVRYDFDEAEGEHPKEGRVITLEFEQFYFVTAYVPNSKEELARLDYRM-QWEDAMAR 130
Query: 60 YVKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFR 119
++ +L + KPV+ TGDLN A +EID+ NP N + GF+D+ERQ + LS GF DTFR
Sbjct: 131 HLAKLNETKPVVYTGDLNVAVEEIDLKNPKTNHFNPGFSDQERQKM-RDLLSLGFADTFR 189
Query: 120 AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ V Y++W YR R N GWR+DYF+VSQ L ++ DS I D+ GSDH P+G+
Sbjct: 190 TLYPEKVEYSWWSYRFNSRAKNVGWRIDYFIVSQRLMNQVKDSVIYGDILGSDHCPVGVE 249
Query: 180 LKL 182
++
Sbjct: 250 IEF 252
>gi|421276707|ref|ZP_15727528.1| exodeoxyribonuclease III [Streptococcus mitis SPAR10]
gi|395876913|gb|EJG87985.1| exodeoxyribonuclease III [Streptococcus mitis SPAR10]
Length = 275
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 110/168 (65%), Gaps = 4/168 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S DSEGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ +L+K+KPV+
Sbjct: 106 STMDSEGRIITLEFDTFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAQLDKQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER+ F N L+KGF DTFR H V YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEEREGF-TNLLAKGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
R K N GWR+DY+L S +ADK S ++ DH+PI L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVL 271
>gi|171780197|ref|ZP_02921101.1| hypothetical protein STRINF_01985 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281545|gb|EDT46980.1| putative exodeoxyribonuclease III [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 168
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 111/169 (65%), Gaps = 4/169 (2%)
Query: 16 DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVILTGD 75
DSEGR++T EFD+F++ Y PN+GDGL+RL+ R WD + Y+ EL++KKPV+ TGD
Sbjct: 2 DSEGRIITLEFDNFYVTQVYTPNAGDGLKRLAERQL-WDEKYAQYLAELDQKKPVLATGD 60
Query: 76 LNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYWGYR 134
N AHQEID+ NP NRRSAGFTDEER F N L+KGF DTFR H + Y++W R
Sbjct: 61 YNVAHQEIDLANPNSNRRSAGFTDEERAGF-TNLLAKGFTDTFRHLHGNIPNVYSWWAQR 119
Query: 135 HGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 120 SKTSKINNTGWRIDYWLTSNRIADKVTKSEMIDSGARQDHTPILLEIDL 168
>gi|417937397|ref|ZP_12580697.1| exodeoxyribonuclease III [Streptococcus infantis SK970]
gi|343391661|gb|EGV04234.1| exodeoxyribonuclease III [Streptococcus infantis SK970]
Length = 275
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 113/172 (65%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S DSEGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ +L+K+KPV+
Sbjct: 106 STMDSEGRIITLEFDTFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAQLDKQKPVLS 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER+ F N L+KGF DTFR H + YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEEREGF-TNLLAKGFTDTFRHIHGDMPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVLEIEL 275
>gi|419842389|ref|ZP_14365737.1| exodeoxyribonuclease III [Streptococcus infantis ATCC 700779]
gi|385703866|gb|EIG40968.1| exodeoxyribonuclease III [Streptococcus infantis ATCC 700779]
Length = 275
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 110/168 (65%), Gaps = 4/168 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S DSEGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ +L+K+KPV+
Sbjct: 106 STMDSEGRIITLEFDTFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAQLDKQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER+ F N L+KGF DTFR H V YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEEREGF-TNLLAKGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
R K N GWR+DY+L S +ADK S ++ DH+PI +
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVSKSDMIDSGARQDHTPIVM 271
>gi|258512235|ref|YP_003185669.1| exodeoxyribonuclease III Xth [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478961|gb|ACV59280.1| exodeoxyribonuclease III Xth [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 252
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/183 (49%), Positives = 118/183 (64%), Gaps = 4/183 (2%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I PL V YG G +D EGR++T EF SF++++ Y PN+ L RL YR+ EW+ + +Y
Sbjct: 73 ITPLDVRYGFG-DGNDPEGRIITLEFPSFYVVTVYTPNAKRDLSRLPYRL-EWEDAFCAY 130
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+ L+++KPVI GDLN AH+EIDI N NR ++GFTDEER L+ GFVDTFRA
Sbjct: 131 LCALDREKPVIACGDLNVAHEEIDIKNAKSNRGNSGFTDEERAKM-TELLAAGFVDTFRA 189
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
H V YT+W G R+ N GWR+DYFLVS+ L D+ D+ I V GSDH P+ L
Sbjct: 190 LHPNVTDKYTWWSNMPGVRERNIGWRIDYFLVSERLRDRILDARIDDHVLGSDHCPVVLE 249
Query: 180 LKL 182
+ L
Sbjct: 250 VDL 252
>gi|337281640|ref|YP_004621111.1| exodeoxyribonuclease [Streptococcus parasanguinis ATCC 15912]
gi|335369233|gb|AEH55183.1| exodeoxyribonuclease [Streptococcus parasanguinis ATCC 15912]
Length = 282
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 113 STMDLEGRIITLEFDHFFVTQVYTPNAGDGLKRLEERQV-WDVKYAKYLAELDKQKPVLA 171
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER+ F N L+KGF DTFR H V YT+W
Sbjct: 172 TGDYNVAHKEIDLANPASNRRSPGFTDEEREGF-TNLLAKGFTDTFRHLHGDVPERYTWW 230
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S + DK S ++ DH+PI L +KL
Sbjct: 231 AQRSKTSKINNTGWRIDYWLTSNRVTDKITKSDMIDSGARQDHTPIVLEIKL 282
>gi|387879199|ref|YP_006309502.1| exodeoxyribonuclease III [Streptococcus parasanguinis FW213]
gi|386792653|gb|AFJ25688.1| exodeoxyribonuclease III [Streptococcus parasanguinis FW213]
Length = 282
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 111/172 (64%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL+ R WD + Y+ EL+K+KPV+
Sbjct: 113 STMDLEGRIITLEFDHFFVTQVYTPNAGDGLKRLAERQV-WDVKYAEYLAELDKEKPVLA 171
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER+ F N L+KGF DTFR H V YT+W
Sbjct: 172 TGDYNVAHKEIDLANPASNRRSPGFTDEEREGF-TNLLAKGFTDTFRHLHGDVPERYTWW 230
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 231 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIDL 282
>gi|339448653|ref|ZP_08652209.1| exodeoxyribonuclease III Xth [Lactobacillus fructivorans KCTC 3543]
Length = 256
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 120/179 (67%), Gaps = 3/179 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
K +V YG+ +D D EGR +T E+ F+L++ YVPNSG+ L+RL YR+ +WD ++V
Sbjct: 73 KAQNVIYGVDGTDTDVEGRCLTLEYPDFYLINTYVPNSGEELQRLDYRL-DWDQKFITFV 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L KPVI+ GD++ A+Q IDI +P + AG+T +ER FG L+ GFVDTFRA
Sbjct: 132 NKLTGTKPVIIGGDMSVAYQPIDIDDPEEDHHKAGYTQQERDDFG-RLLASGFVDTFRAL 190
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
H G YT+W YR+ R +RGWR+DYFLVS S+ + +S IL +V GSDH+PI LI
Sbjct: 191 HPHQSGAYTWWSYRYDERARDRGWRMDYFLVSDSIQNDVAESNILGNVMGSDHAPIQLI 249
>gi|419799163|ref|ZP_14324529.1| exodeoxyribonuclease III [Streptococcus parasanguinis F0449]
gi|385698607|gb|EIG28958.1| exodeoxyribonuclease III [Streptococcus parasanguinis F0449]
Length = 275
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDHFFVTQVYTPNAGDGLKRLEERQV-WDVKYAKYLAELDKQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER+ F N L+KGF DTFR H V YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEEREGF-TNLLAKGFTDTFRHLHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S + DK S ++ DH+PI L +KL
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVTDKITKSDMIDSGARQDHTPIVLEIKL 275
>gi|48477699|ref|YP_023405.1| exodeoxyribonuclease III [Picrophilus torridus DSM 9790]
gi|48430347|gb|AAT43212.1| exodeoxyribonuclease III [Picrophilus torridus DSM 9790]
Length = 250
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 120/180 (66%), Gaps = 2/180 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++PL + G+GI D+DSEGR+ ++D+F++++ Y PNS GL RL Y+I ++D +
Sbjct: 73 VEPLDYSSGIGIKDYDSEGRVQILKYDNFYIINTYFPNSQHGLTRLDYKI-DFDNKFLEF 131
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++L K+KP+I+TGD N AH+EIDI P N +AGFT +ER ++ FL+ G++DT+R
Sbjct: 132 CEKLRKEKPLIITGDFNVAHEEIDIARPKDNENNAGFTIQER-NWMTEFLNHGYIDTYRY 190
Query: 121 QHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
H+ Y++W YR R N GWR+DYF+V+ DS IL +V GSDH+P+ L+L
Sbjct: 191 FHKEPGHYSWWSYRFNARAKNIGWRIDYFIVTDDFIKNVKDSIILENVKGSDHAPLELLL 250
>gi|417092680|ref|ZP_11957296.1| exodeoxyribonuclease [Streptococcus suis R61]
gi|353532359|gb|EHC02031.1| exodeoxyribonuclease [Streptococcus suis R61]
Length = 275
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 113/169 (66%), Gaps = 4/169 (2%)
Query: 16 DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVILTGD 75
DSEGR++T EFD F++ Y PN+GDGL+RL+ R WD + Y+ +L+ +KPV+ TGD
Sbjct: 109 DSEGRIITLEFDDFYVTQVYTPNAGDGLKRLADRQI-WDVQYAEYLSQLDSQKPVLATGD 167
Query: 76 LNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVV-GYTYWGYR 134
N AH+EID+ NPA NR+S GFTDEERQ F N L+KGF DTFR H V+ YT+W R
Sbjct: 168 YNVAHKEIDLANPASNRQSPGFTDEERQGF-TNLLAKGFTDTFRHLHGDVLNAYTWWAQR 226
Query: 135 HGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
K N GWR+DY+LVS +ADK S ++ DH+PI + ++L
Sbjct: 227 SRTSKINNTGWRIDYWLVSDRIADKVSKSDMIDSGARQDHTPIVMEIEL 275
>gi|312867077|ref|ZP_07727287.1| exodeoxyribonuclease III [Streptococcus parasanguinis F0405]
gi|311097206|gb|EFQ55440.1| exodeoxyribonuclease III [Streptococcus parasanguinis F0405]
Length = 275
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDKFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER+ F N L+KGF DTFR H V YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEEREGF-TNLLAKGFTDTFRHVHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVLEIDL 275
>gi|315452849|ref|YP_004073119.1| exodeoxyribonuclease [Helicobacter felis ATCC 49179]
gi|315131901|emb|CBY82529.1| exodeoxyribonuclease [Helicobacter felis ATCC 49179]
Length = 255
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 115/181 (63%), Gaps = 3/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL V YGLG+ +HD+EGR++T E++ F+L++ Y PNS GL RL YR+ +W+ +++
Sbjct: 73 PLDVRYGLGLEEHDTEGRVITCEYEYFYLVNVYTPNSQRGLLRLPYRL-QWESVFREFLQ 131
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L K V++ GDLN AH EID+ NP NR +AGF+D ER +FG L G +DT+R +
Sbjct: 132 NLASHKEVLICGDLNVAHTEIDLTNPQSNRYNAGFSDPERNAFG-QLLQLGLIDTYRHFY 190
Query: 123 RGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y + R N GWR+DYFL SQ L + D+ I + GSDH P+GL +
Sbjct: 191 PDKTEVYTWWSYMNQSRARNIGWRIDYFLASQGLRSQLKDACIYAHILGSDHCPVGLEMS 250
Query: 182 L 182
+
Sbjct: 251 I 251
>gi|374338532|ref|YP_005095247.1| Exodeoxyribonuclease III [Streptococcus macedonicus ACA-DC 198]
gi|372284647|emb|CCF02936.1| Exodeoxyribonuclease III [Streptococcus macedonicus ACA-DC 198]
Length = 276
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 120/186 (64%), Gaps = 6/186 (3%)
Query: 1 IKPLSVTYG-LGISDH-DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLS 58
+ P S++Y +G D+ DSEGR++T EFD FF+ Y PN+GDGL+RL+ R WD +
Sbjct: 93 LTPRSISYPEIGAPDNMDSEGRIITLEFDKFFVTQVYTPNAGDGLKRLAERQI-WDEKYA 151
Query: 59 SYVKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTF 118
Y+ EL++ KPV+ TGD N AH+EID+ +P+ NRRS GFTDEER F N L+KGF DTF
Sbjct: 152 DYLAELDQVKPVLATGDYNVAHKEIDLAHPSSNRRSPGFTDEERAGF-TNLLAKGFTDTF 210
Query: 119 RAQHRGVVG-YTYWGYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPI 176
R H V G Y++W R K N GWR+DY+L S +ADK S ++ DH+PI
Sbjct: 211 RYIHGDVPGVYSWWAQRSKTSKINNSGWRIDYWLTSSRIADKITKSEMIDSGARQDHTPI 270
Query: 177 GLILKL 182
L + L
Sbjct: 271 VLEIDL 276
>gi|322388347|ref|ZP_08061951.1| exodeoxyribonuclease [Streptococcus infantis ATCC 700779]
gi|321141019|gb|EFX36520.1| exodeoxyribonuclease [Streptococcus infantis ATCC 700779]
Length = 340
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 110/168 (65%), Gaps = 4/168 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S DSEGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ +L+K+KPV+
Sbjct: 171 STMDSEGRIITLEFDTFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAQLDKQKPVLA 229
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER+ F N L+KGF DTFR H V YT+W
Sbjct: 230 TGDYNVAHKEIDLANPASNRRSPGFTDEEREGF-TNLLAKGFTDTFRHIHGDVPERYTWW 288
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
R K N GWR+DY+L S +ADK S ++ DH+PI +
Sbjct: 289 AQRSKTSKINNTGWRIDYWLTSNRVADKVSKSDMIDSGARQDHTPIVM 336
>gi|313680366|ref|YP_004058105.1| exodeoxyribonuclease III xth [Oceanithermus profundus DSM 14977]
gi|313153081|gb|ADR36932.1| exodeoxyribonuclease III Xth [Oceanithermus profundus DSM 14977]
Length = 252
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 119/183 (65%), Gaps = 3/183 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+ PL VTYG+G + D EGR++T E++ +++++ Y PN+G GL RL Y++ +D ++ +Y
Sbjct: 72 VPPLDVTYGIGHDEFDEEGRVITLEYERYYVVNAYFPNAGRGLPRLGYKLA-FDQAIENY 130
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
++ L +K V+L GDLN AH+EIDI P N++SAGFT EER A FL KG++DTFR
Sbjct: 131 LEGLRARKGVVLMGDLNVAHREIDIARPKQNQKSAGFTPEERAWIDA-FLKKGWIDTFRH 189
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
H G YT+W YR R N GWR+DY L+S+ L D+YI D SDH P+ +
Sbjct: 190 LHPDATGAYTWWTYRFNARAKNIGWRIDYILISEDLLPHLMDAYIYYDAYASDHVPVVAV 249
Query: 180 LKL 182
L +
Sbjct: 250 LDV 252
>gi|332522573|ref|ZP_08398825.1| exodeoxyribonuclease III [Streptococcus porcinus str. Jelinkova
176]
gi|332313837|gb|EGJ26822.1| exodeoxyribonuclease III [Streptococcus porcinus str. Jelinkova
176]
Length = 275
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 109/169 (64%), Gaps = 4/169 (2%)
Query: 16 DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVILTGD 75
DSEGR++T EFD FF+ Y PN+GDGLRRL+ R EWD + Y+ +L+ +KPV+ TGD
Sbjct: 109 DSEGRIITLEFDDFFVTQVYTPNAGDGLRRLADR-QEWDIKYAEYLAQLDAQKPVLATGD 167
Query: 76 LNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYWGYR 134
N AH+EID+ NPA NRRS GFTDEER F A L KGF DTFR H + YT+W R
Sbjct: 168 YNVAHKEIDLANPASNRRSPGFTDEERAGFTA-LLEKGFTDTFRHLHGDIPNVYTWWAQR 226
Query: 135 HGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
K N GWR+DY+L S +ADK S +L DH+PI L + L
Sbjct: 227 SKTSKMNNTGWRIDYWLTSNRVADKVLKSEMLDSGARQDHTPILLEIDL 275
>gi|261366200|ref|ZP_05979083.1| exodeoxyribonuclease III [Subdoligranulum variabile DSM 15176]
gi|282572018|gb|EFB77553.1| exodeoxyribonuclease III [Subdoligranulum variabile DSM 15176]
Length = 251
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 115/180 (63%), Gaps = 3/180 (1%)
Query: 4 LSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKE 63
LSV YGL H+ EGR +T E+ F+L++ YVPNS + L R+ YR+ +W+ L Y++
Sbjct: 74 LSVRYGLEEDLHNHEGRAITLEYPDFYLVNLYVPNSQNELARIDYRM-QWEDDLRRYLQA 132
Query: 64 LEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHR 123
L+ +KPVIL GDLN AH EID+ NP NR +AGF+D+ER L+ GF DTFR H
Sbjct: 133 LDAQKPVILCGDLNVAHTEIDLKNPGPNRGAAGFSDQERGKLD-ELLAAGFTDTFRHLHP 191
Query: 124 GVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
G Y++W R R+ N GWR+DYFLVS LA + + IL D+ GSDH P+ L L L
Sbjct: 192 DATGIYSWWSMRFRARERNAGWRIDYFLVSNRLAPQIRKADILMDILGSDHCPVTLELDL 251
>gi|405982630|ref|ZP_11040941.1| exodeoxyribonuclease III (xth) [Slackia piriformis YIT 12062]
gi|404389339|gb|EJZ84415.1| exodeoxyribonuclease III (xth) [Slackia piriformis YIT 12062]
Length = 285
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/216 (41%), Positives = 117/216 (54%), Gaps = 37/216 (17%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL +GLG S D EGR+V EFD ++ + Y PN+ + L R+ +R+ WD + +
Sbjct: 72 KPLRALHGLGDSALDDEGRIVALEFDDYWFVDVYTPNAQNELARIDHRMA-WDDAFRDFC 130
Query: 62 KELEK----------------------------------KKPVILTGDLNCAHQEIDIYN 87
K LEK KPV++ GD N AHQEID+ N
Sbjct: 131 KNLEKGAIPAGVAVQDCAEGEGHVSISELPLTQEGERTSAKPVVMCGDFNVAHQEIDLKN 190
Query: 88 PAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYWGYRHGGRKTNRGWRL 146
P NR +AGF+DEER+ F L GFVDTFR H G Y++W YR RK N GWR+
Sbjct: 191 PGPNRGNAGFSDEEREKF-TRLLDAGFVDTFRVLHPDEAGAYSWWSYRFNARKNNAGWRI 249
Query: 147 DYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
DYFLVS+SL D HD+ + D+ GSDH P+ + L +
Sbjct: 250 DYFLVSESLRDAIHDARMHADIMGSDHCPVSVELDV 285
>gi|51246268|ref|YP_066152.1| exodeoxyribonuclease (ExoA) [Desulfotalea psychrophila LSv54]
gi|50877305|emb|CAG37145.1| probable exodeoxyribonuclease (ExoA) [Desulfotalea psychrophila
LSv54]
Length = 480
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 118/180 (65%), Gaps = 2/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL V YG+G + D EGR++T EF +L + Y PNS D L+RL Y++ ++ +L ++
Sbjct: 302 EPLQVIYGIGAEEFDCEGRVITLEFADHYLATIYFPNSADQLKRLDYKL-RFNRALLAFF 360
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
++LEK+K VIL GD N AH+EID+ NP N ++AGFT EER ++ FL G+ DTFR
Sbjct: 361 QKLEKEKAVILCGDFNVAHKEIDLKNPKSNVKNAGFTPEER-AWMDEFLEAGYTDTFRLF 419
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
++ Y++W YR R N GWR+DYF VS++ + ++ ILP+V GSDH P+ L K
Sbjct: 420 NQDPENYSWWSYRFSARSKNIGWRIDYFCVSENGQKRIVNAEILPEVMGSDHCPVLLDFK 479
>gi|322389122|ref|ZP_08062685.1| exodeoxyribonuclease [Streptococcus parasanguinis ATCC 903]
gi|321144164|gb|EFX39579.1| exodeoxyribonuclease [Streptococcus parasanguinis ATCC 903]
Length = 282
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 111/172 (64%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL+ R WD + Y+ +L+K+KPV+
Sbjct: 113 STMDLEGRIITLEFDGFFVTQVYTPNAGDGLKRLAERQV-WDVKYAEYLADLDKEKPVLA 171
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER+ F N L+KGF DTFR H V YT+W
Sbjct: 172 TGDYNVAHKEIDLANPASNRRSPGFTDEEREGF-TNLLAKGFTDTFRHVHGDVPERYTWW 230
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 231 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIDL 282
>gi|410456343|ref|ZP_11310205.1| exodeoxyribonuclease III [Bacillus bataviensis LMG 21833]
gi|409928167|gb|EKN65287.1| exodeoxyribonuclease III [Bacillus bataviensis LMG 21833]
Length = 250
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 118/179 (65%), Gaps = 3/179 (1%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I+P+SV YG+G + + EGR++T EFD FFL++ Y PNS L R+ YR+ EW+ + +
Sbjct: 71 IEPISVRYGVGTDESEEEGRILTLEFDDFFLVNIYTPNSQRDLARIGYRL-EWESRILEH 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+KEL+K KPVIL GDLN AHQEID+ N N ++GFTDEER + LS GFVD++R
Sbjct: 130 LKELDKLKPVILCGDLNVAHQEIDLRNSKSNVGNSGFTDEERGKM-TSLLSAGFVDSYRH 188
Query: 121 QHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G YT+W Y R+ N GWR+DYF+VS+ L + + I +V GSDH PI L
Sbjct: 189 FYPDQEGAYTWWSYMMKVRERNIGWRIDYFIVSEKLRENLKSADIHCNVMGSDHCPIVL 247
>gi|406577335|ref|ZP_11052948.1| exodeoxyribonuclease III [Streptococcus sp. GMD6S]
gi|404460100|gb|EKA06389.1| exodeoxyribonuclease III [Streptococcus sp. GMD6S]
Length = 275
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KP++
Sbjct: 106 STMDLEGRIITLEFDKFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPILA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S LADK S ++ DH+PI L +KL
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRLADKVTKSDMIDSGARQDHTPIVLEIKL 275
>gi|365155344|ref|ZP_09351722.1| exodeoxyribonuclease III (xth) [Bacillus smithii 7_3_47FAA]
gi|363628500|gb|EHL79253.1| exodeoxyribonuclease III (xth) [Bacillus smithii 7_3_47FAA]
Length = 254
Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 120/180 (66%), Gaps = 3/180 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YGLG +++ EGR++T EF F+L++ Y PNS L RL YR+ EW+ + SY+
Sbjct: 72 EPLSVHYGLGDVENEPEGRIITLEFPKFYLVNVYTPNSQRDLARLPYRL-EWEDRIRSYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L+K KPV+L GDLN AHQEID+ NP N+ ++GFT EER + L+ GF+DTFR
Sbjct: 131 IDLDKDKPVLLCGDLNVAHQEIDLRNPKSNQGNSGFTKEERAKM-SELLNAGFIDTFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G YT+W Y + R+ N GWR+DYF+ S+ LA+ ++ I + GSDH PI L L
Sbjct: 190 YPEKEGAYTWWSYINKARERNIGWRIDYFIASKRLANIIKNAEIHSHIMGSDHCPIVLEL 249
>gi|418967996|ref|ZP_13519626.1| exodeoxyribonuclease III [Streptococcus mitis SK616]
gi|383341709|gb|EID19962.1| exodeoxyribonuclease III [Streptococcus mitis SK616]
Length = 275
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDEFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L +KL
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIKL 275
>gi|283769444|ref|ZP_06342342.1| exodeoxyribonuclease III [Bulleidia extructa W1219]
gi|283103969|gb|EFC05354.1| exodeoxyribonuclease III [Bulleidia extructa W1219]
Length = 251
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 120/179 (67%), Gaps = 3/179 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV Y + D EGR++T E+ +++ ++ YVPNS +GL RL +R+ EW+ L ++
Sbjct: 74 EPISVQYDIE-GDTSMEGRVITLEYPNYYFVTAYVPNSKEGLARLGFRM-EWEDRLRDHL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L++ KPVI TGDLN AH+EID+ NP N ++ GF+DEERQ L+ G++D+FR
Sbjct: 132 NRLKEVKPVIYTGDLNVAHEEIDLKNPQSNHKNPGFSDEERQKM-TELLADGYIDSFRYL 190
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ V Y++W YR R+ N GWR+DYF+VS++L +K ++ I +V GSDH PI L +
Sbjct: 191 YPKEVKYSWWSYRAAARERNVGWRIDYFIVSENLKEKVKNALIDDEVKGSDHCPIELEM 249
>gi|418110807|ref|ZP_12747826.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA49447]
gi|353781428|gb|EHD61873.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA49447]
Length = 275
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 109/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDKFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ T DH+PI + ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGTRQDHTPIVMEIEL 275
>gi|300362953|ref|ZP_07059123.1| exodeoxyribonuclease III [Lactobacillus gasseri JV-V03]
gi|300353003|gb|EFJ68881.1| exodeoxyribonuclease III [Lactobacillus gasseri JV-V03]
Length = 268
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP++V G G+ + D EGR +T EF +F+ + VP SG+ L+RL +R W + +YV
Sbjct: 86 KPITVANGFGVPEVDGEGRSITLEFPNFYFIDVQVPFSGEKLQRLDFR-ELWAQTFRNYV 144
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L + KPVI+ GD++ AH++ID+ P N R AGFT ER+ F + L+ GF+DTFR
Sbjct: 145 TKLMQYKPVIIGGDMSVAHEKIDLAEPDDNHRHAGFTGIERKEF-SELLNAGFIDTFRYF 203
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
H YTYW YR R N GWRLDYFLVS +L DK ++ IL ++ GSDH PI L L
Sbjct: 204 HPDEAKYTYWSYREDARAKNIGWRLDYFLVSHNLEDKIINTKILNNIMGSDHCPIELDLD 263
Query: 182 L 182
+
Sbjct: 264 I 264
>gi|421487519|ref|ZP_15934921.1| exodeoxyribonuclease III [Streptococcus oralis SK304]
gi|400370449|gb|EJP23433.1| exodeoxyribonuclease III [Streptococcus oralis SK304]
Length = 275
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ +L+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDTFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAQLDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLASGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L +KL
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVLEIKL 275
>gi|406588642|ref|ZP_11063215.1| exodeoxyribonuclease III, partial [Streptococcus sp. GMD1S]
gi|404467351|gb|EKA12486.1| exodeoxyribonuclease III, partial [Streptococcus sp. GMD1S]
Length = 294
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KP++
Sbjct: 125 STMDLEGRIITLEFDKFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPILA 183
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 184 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPERYTWW 242
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S LADK S ++ DH+PI L +KL
Sbjct: 243 AQRSKTSKINNTGWRIDYWLTSNRLADKVTKSDMIDSGARQDHTPIVLEIKL 294
>gi|419816139|ref|ZP_14340501.1| exodeoxyribonuclease III, partial [Streptococcus sp. GMD2S]
gi|404463486|gb|EKA09115.1| exodeoxyribonuclease III, partial [Streptococcus sp. GMD2S]
Length = 295
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KP++
Sbjct: 126 STMDLEGRIITLEFDKFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPILA 184
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 185 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPERYTWW 243
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S LADK S ++ DH+PI L +KL
Sbjct: 244 AQRSKTSKINNTGWRIDYWLTSNRLADKVTKSDMIDSGARQDHTPIVLEIKL 295
>gi|311110171|ref|ZP_07711568.1| exodeoxyribonuclease III [Lactobacillus gasseri MV-22]
gi|311065325|gb|EFQ45665.1| exodeoxyribonuclease III [Lactobacillus gasseri MV-22]
Length = 265
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 114/181 (62%), Gaps = 2/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP++V G G+ + D EGR +T EF +F+ + VP SG+ L+RL +R W + +YV
Sbjct: 83 KPITVANGFGVPEVDGEGRSITLEFSNFYFIDVQVPFSGEKLQRLDFR-ELWAQTFRNYV 141
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L + KPVI+ GD++ AH +ID+ P N R AGFT ER+ F + L+ GF+DTFR
Sbjct: 142 TKLMQYKPVIIGGDMSVAHDKIDLAEPDDNHRHAGFTGIERKEF-SELLNAGFIDTFRYF 200
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
H YTYW YR R N GWRLDYFLVS +L DK ++ IL ++ GSDH PI L L
Sbjct: 201 HPDEAKYTYWSYREDARAKNIGWRLDYFLVSNNLEDKMINAQILNNIMGSDHCPIELDLD 260
Query: 182 L 182
+
Sbjct: 261 I 261
>gi|419781786|ref|ZP_14307600.1| exodeoxyribonuclease III [Streptococcus oralis SK610]
gi|383183844|gb|EIC76376.1| exodeoxyribonuclease III [Streptococcus oralis SK610]
Length = 275
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ +L+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAQLDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L +KL
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVLEIKL 275
>gi|358464338|ref|ZP_09174303.1| exodeoxyribonuclease III [Streptococcus sp. oral taxon 058 str.
F0407]
gi|357067104|gb|EHI77234.1| exodeoxyribonuclease III [Streptococcus sp. oral taxon 058 str.
F0407]
Length = 275
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVLEIEL 275
>gi|417917517|ref|ZP_12561076.1| exodeoxyribonuclease III [Streptococcus parasanguinis SK236]
gi|342830154|gb|EGU64493.1| exodeoxyribonuclease III [Streptococcus parasanguinis SK236]
Length = 275
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 108/168 (64%), Gaps = 4/168 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDHFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER+ F N L+KGF DTFR H V YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEEREGF-TNLLAKGFTDTFRHLHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
R K N GWR+DY+L S +ADK S ++ DH+PI L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVL 271
>gi|282852873|ref|ZP_06262214.1| exodeoxyribonuclease III [Lactobacillus gasseri 224-1]
gi|282555981|gb|EFB61602.1| exodeoxyribonuclease III [Lactobacillus gasseri 224-1]
Length = 254
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 114/181 (62%), Gaps = 2/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP++V G G+ + D EGR +T EF +F+ + VP SG+ L+RL +R W + +YV
Sbjct: 72 KPITVANGFGVPEVDGEGRSITLEFSNFYFIDVQVPFSGEKLQRLDFR-ELWAQTFRNYV 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L + KPVI+ GD++ AH +ID+ P N R AGFT ER+ F + L+ GF+DTFR
Sbjct: 131 TKLMQYKPVIIGGDMSVAHDKIDLAEPDDNHRHAGFTGIERKEF-SELLNAGFIDTFRYF 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
H YTYW YR R N GWRLDYFLVS +L DK ++ IL ++ GSDH PI L L
Sbjct: 190 HPDEAKYTYWSYREDARAKNIGWRLDYFLVSNNLEDKMINAQILNNIMGSDHCPIELDLD 249
Query: 182 L 182
+
Sbjct: 250 I 250
>gi|392947967|ref|ZP_10313585.1| Exodeoxyribonuclease III [Lactobacillus pentosus KCA1]
gi|392436819|gb|EIW14725.1| Exodeoxyribonuclease III [Lactobacillus pentosus KCA1]
Length = 254
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 115/181 (63%), Gaps = 3/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PL+VTYG+G+ + D+EGR++T E+ +++L+CY PNSG L+RL YR W+ + +Y+
Sbjct: 73 PLNVTYGIGVPEFDTEGRVITLEYADYYVLTCYTPNSGGELKRLDYR-QHWEDAFLTYIN 131
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L KP+I GDLN AH+ ID+ N N SAGFTDEER F L+ G+ DTFR +
Sbjct: 132 SLSANKPLIFCGDLNVAHENIDLKNWRSNHHSAGFTDEERGKFD-RLLANGYTDTFRHFY 190
Query: 123 RGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
Y++W YR R N GWR+DYF+ SQ L + ++ IL DV GSDH P+ L +
Sbjct: 191 PDQTDIYSWWSYRGHARDNNSGWRIDYFITSQQLDGQLLNARILNDVFGSDHCPVELDII 250
Query: 182 L 182
L
Sbjct: 251 L 251
>gi|116630243|ref|YP_815415.1| exonuclease III [Lactobacillus gasseri ATCC 33323]
gi|420148175|ref|ZP_14655447.1| Exonuclease III [Lactobacillus gasseri CECT 5714]
gi|116095825|gb|ABJ60977.1| Exonuclease III [Lactobacillus gasseri ATCC 33323]
gi|398400333|gb|EJN53898.1| Exonuclease III [Lactobacillus gasseri CECT 5714]
Length = 268
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 114/181 (62%), Gaps = 2/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP++V G G+ + D EGR +T EF +F+ + VP SG+ L+RL +R W + +YV
Sbjct: 86 KPITVANGFGVPEVDGEGRSITLEFSNFYFIDVQVPFSGEKLQRLDFR-ELWAQTFRNYV 144
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L + KPVI+ GD++ AH +ID+ P N R AGFT ER+ F + L+ GF+DTFR
Sbjct: 145 TKLMQYKPVIIGGDMSVAHDKIDLAEPDDNHRHAGFTGIERKEF-SELLNAGFIDTFRYF 203
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
H YTYW YR R N GWRLDYFLVS +L DK ++ IL ++ GSDH PI L L
Sbjct: 204 HPDEAKYTYWSYREDARAKNIGWRLDYFLVSNNLEDKMINAQILNNIMGSDHCPIELDLD 263
Query: 182 L 182
+
Sbjct: 264 I 264
>gi|401684405|ref|ZP_10816284.1| exodeoxyribonuclease III [Streptococcus sp. BS35b]
gi|400185649|gb|EJO19875.1| exodeoxyribonuclease III [Streptococcus sp. BS35b]
Length = 275
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDTFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHLHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVLEIEL 275
>gi|319652957|ref|ZP_08007062.1| exodeoxyribonuclease III [Bacillus sp. 2_A_57_CT2]
gi|317395306|gb|EFV76039.1| exodeoxyribonuclease III [Bacillus sp. 2_A_57_CT2]
Length = 251
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 119/182 (65%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YGLG ++ + EGR++T E++ F+L++ Y PNS L RL YR+ EW+ + Y+
Sbjct: 72 EPLSVRYGLGDNETEPEGRILTLEYEGFYLVNVYTPNSQRDLARLPYRL-EWEERIREYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L++ KPVI+ GDLN AH EID+ N NR ++GFTDEER L GFVD FR +
Sbjct: 131 LGLDQIKPVIMCGDLNVAHFEIDLKNAKSNRGNSGFTDEERGKM-TRLLGSGFVDAFRYK 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G YT+W Y R+ N GWR+DYF+VS+ L ++ DS I D+ GSDH P+ L L
Sbjct: 190 YPEAEGAYTWWSYMAKVRERNIGWRIDYFIVSEKLKERILDSQIHCDIMGSDHCPVALEL 249
Query: 181 KL 182
++
Sbjct: 250 EI 251
>gi|15901674|ref|NP_346278.1| exodeoxyribonuclease [Streptococcus pneumoniae TIGR4]
gi|15903702|ref|NP_359252.1| exodeoxyribonuclease [Streptococcus pneumoniae R6]
gi|111658189|ref|ZP_01408884.1| hypothetical protein SpneT_02000620 [Streptococcus pneumoniae
TIGR4]
gi|116516049|ref|YP_817078.1| exodeoxyribonuclease III [Streptococcus pneumoniae D39]
gi|149004304|ref|ZP_01829075.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS69]
gi|168483377|ref|ZP_02708329.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC1873-00]
gi|194397999|ref|YP_002038432.1| exodeoxyribonuclease III [Streptococcus pneumoniae G54]
gi|237649626|ref|ZP_04523878.1| exodeoxyribonuclease III [Streptococcus pneumoniae CCRI 1974]
gi|237822093|ref|ZP_04597938.1| exodeoxyribonuclease III [Streptococcus pneumoniae CCRI 1974M2]
gi|303258792|ref|ZP_07344772.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP-BS293]
gi|303261955|ref|ZP_07347901.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS292]
gi|303263817|ref|ZP_07349739.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS397]
gi|303265648|ref|ZP_07351547.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS457]
gi|303268757|ref|ZP_07354546.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS458]
gi|417697002|ref|ZP_12346180.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47368]
gi|418077062|ref|ZP_12714294.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47502]
gi|418092439|ref|ZP_12729579.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA44452]
gi|418108280|ref|ZP_12745317.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA41410]
gi|418121882|ref|ZP_12758825.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA44194]
gi|418140172|ref|ZP_12776997.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA13338]
gi|418144986|ref|ZP_12781780.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA13494]
gi|418162875|ref|ZP_12799556.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17328]
gi|418176624|ref|ZP_12813215.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA41437]
gi|418181202|ref|ZP_12817771.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA41688]
gi|418219554|ref|ZP_12846219.1| exodeoxyribonuclease III [Streptococcus pneumoniae NP127]
gi|418221868|ref|ZP_12848521.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47751]
gi|418239354|ref|ZP_12865905.1| exodeoxyribonuclease III [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419423625|ref|ZP_13963838.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA43264]
gi|419434118|ref|ZP_13974236.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA40183]
gi|419458402|ref|ZP_13998344.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA02254]
gi|419460646|ref|ZP_14000574.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA02270]
gi|419462989|ref|ZP_14002892.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA02714]
gi|419489607|ref|ZP_14029356.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA44386]
gi|419491721|ref|ZP_14031459.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47179]
gi|419526545|ref|ZP_14066102.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA14373]
gi|419533020|ref|ZP_14072535.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47794]
gi|421236920|ref|ZP_15693517.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2071004]
gi|421243777|ref|ZP_15700288.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2081074]
gi|421248121|ref|ZP_15704597.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2082170]
gi|421266817|ref|ZP_15717697.1| exodeoxyribonuclease III [Streptococcus pneumoniae SPAR27]
gi|421275534|ref|ZP_15726363.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA52612]
gi|421296676|ref|ZP_15747385.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA58581]
gi|421308048|ref|ZP_15758689.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA60132]
gi|61223736|sp|P0A2X3.1|EXOA_STRPN RecName: Full=Exodeoxyribonuclease
gi|61223737|sp|P0A2X4.1|EXOA_STRR6 RecName: Full=Exodeoxyribonuclease
gi|153627|gb|AAA26879.1| exodeoxyribonuclease [Streptococcus pneumoniae]
gi|14973347|gb|AAK75918.1| exodeoxyribonuclease [Streptococcus pneumoniae TIGR4]
gi|15459332|gb|AAL00463.1| Exodeoxyribonuclease [Streptococcus pneumoniae R6]
gi|116076625|gb|ABJ54345.1| exodeoxyribonuclease III [Streptococcus pneumoniae D39]
gi|147757737|gb|EDK64752.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS69]
gi|172043234|gb|EDT51280.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC1873-00]
gi|194357666|gb|ACF56114.1| exodeoxyribonuclease III [Streptococcus pneumoniae G54]
gi|302637038|gb|EFL67527.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS292]
gi|302640293|gb|EFL70748.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP-BS293]
gi|302641713|gb|EFL72071.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS458]
gi|302644775|gb|EFL75023.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS457]
gi|302646855|gb|EFL77080.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS397]
gi|332200400|gb|EGJ14473.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47368]
gi|353746357|gb|EHD27018.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47502]
gi|353763139|gb|EHD43696.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA44452]
gi|353778557|gb|EHD59025.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA41410]
gi|353792718|gb|EHD73090.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA44194]
gi|353805279|gb|EHD85554.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA13494]
gi|353826937|gb|EHE07094.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17328]
gi|353840695|gb|EHE20759.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA41437]
gi|353843274|gb|EHE23319.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA41688]
gi|353873914|gb|EHE53773.1| exodeoxyribonuclease III [Streptococcus pneumoniae NP127]
gi|353875178|gb|EHE55032.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47751]
gi|353892345|gb|EHE72094.1| exodeoxyribonuclease III [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|353904951|gb|EHE80401.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA13338]
gi|379530066|gb|EHY95307.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA02254]
gi|379530421|gb|EHY95661.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA02714]
gi|379530782|gb|EHY96021.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA02270]
gi|379556630|gb|EHZ21680.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA14373]
gi|379577119|gb|EHZ42043.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA40183]
gi|379586197|gb|EHZ51051.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA43264]
gi|379587149|gb|EHZ51999.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA44386]
gi|379593083|gb|EHZ57898.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47179]
gi|379605540|gb|EHZ70291.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47794]
gi|395601683|gb|EJG61830.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2071004]
gi|395606070|gb|EJG66180.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2081074]
gi|395612633|gb|EJG72671.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2082170]
gi|395866885|gb|EJG78013.1| exodeoxyribonuclease III [Streptococcus pneumoniae SPAR27]
gi|395873498|gb|EJG84590.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA52612]
gi|395895549|gb|EJH06524.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA58581]
gi|395906948|gb|EJH17845.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA60132]
Length = 275
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQV-WDAKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHVHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIDL 275
>gi|418131000|ref|ZP_12767883.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA07643]
gi|418187831|ref|ZP_12824354.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47360]
gi|418230632|ref|ZP_12857231.1| exodeoxyribonuclease III [Streptococcus pneumoniae EU-NP01]
gi|419478490|ref|ZP_14018313.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA18068]
gi|421271271|ref|ZP_15722124.1| exodeoxyribonuclease III [Streptococcus pneumoniae SPAR48]
gi|353802324|gb|EHD82624.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA07643]
gi|353849816|gb|EHE29821.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47360]
gi|353885513|gb|EHE65302.1| exodeoxyribonuclease III [Streptococcus pneumoniae EU-NP01]
gi|379565002|gb|EHZ29997.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA18068]
gi|395866467|gb|EJG77596.1| exodeoxyribonuclease III [Streptococcus pneumoniae SPAR48]
Length = 275
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQV-WDAKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHVHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIDL 275
>gi|225857433|ref|YP_002738944.1| exodeoxyribonuclease III [Streptococcus pneumoniae P1031]
gi|405760302|ref|YP_006700898.1| exodeoxyribonuclease [Streptococcus pneumoniae SPNA45]
gi|410477198|ref|YP_006743957.1| exodeoxyribonuclease III [Streptococcus pneumoniae gamPNI0373]
gi|444387697|ref|ZP_21185714.1| exodeoxyribonuclease III [Streptococcus pneumoniae PCS125219]
gi|444389069|ref|ZP_21186986.1| exodeoxyribonuclease III [Streptococcus pneumoniae PCS70012]
gi|444391749|ref|ZP_21189556.1| exodeoxyribonuclease III [Streptococcus pneumoniae PCS81218]
gi|444394745|ref|ZP_21192295.1| exodeoxyribonuclease III [Streptococcus pneumoniae PNI0002]
gi|444398284|ref|ZP_21195767.1| exodeoxyribonuclease III [Streptococcus pneumoniae PNI0006]
gi|444400295|ref|ZP_21197705.1| exodeoxyribonuclease III [Streptococcus pneumoniae PNI0007]
gi|444401486|ref|ZP_21198671.1| exodeoxyribonuclease III [Streptococcus pneumoniae PNI0008]
gi|444406408|ref|ZP_21203159.1| exodeoxyribonuclease III [Streptococcus pneumoniae PNI0009]
gi|444407903|ref|ZP_21204570.1| exodeoxyribonuclease III [Streptococcus pneumoniae PNI0010]
gi|444410208|ref|ZP_21206754.1| exodeoxyribonuclease III [Streptococcus pneumoniae PNI0076]
gi|444412975|ref|ZP_21209294.1| exodeoxyribonuclease III [Streptococcus pneumoniae PNI0153]
gi|444414795|ref|ZP_21211046.1| exodeoxyribonuclease III [Streptococcus pneumoniae PNI0199]
gi|444416806|ref|ZP_21212881.1| exodeoxyribonuclease III [Streptococcus pneumoniae PNI0360]
gi|444420978|ref|ZP_21216738.1| exodeoxyribonuclease III [Streptococcus pneumoniae PNI0427]
gi|444421803|ref|ZP_21217471.1| exodeoxyribonuclease III [Streptococcus pneumoniae PNI0446]
gi|225724673|gb|ACO20525.1| exodeoxyribonuclease III [Streptococcus pneumoniae P1031]
gi|404277191|emb|CCM07696.1| exodeoxyribonuclease [Streptococcus pneumoniae SPNA45]
gi|406370143|gb|AFS43833.1| exodeoxyribonuclease III [Streptococcus pneumoniae gamPNI0373]
gi|444251971|gb|ELU58437.1| exodeoxyribonuclease III [Streptococcus pneumoniae PCS125219]
gi|444257669|gb|ELU64002.1| exodeoxyribonuclease III [Streptococcus pneumoniae PCS70012]
gi|444259363|gb|ELU65677.1| exodeoxyribonuclease III [Streptococcus pneumoniae PNI0002]
gi|444260941|gb|ELU67249.1| exodeoxyribonuclease III [Streptococcus pneumoniae PNI0006]
gi|444264881|gb|ELU70923.1| exodeoxyribonuclease III [Streptococcus pneumoniae PCS81218]
gi|444266752|gb|ELU72688.1| exodeoxyribonuclease III [Streptococcus pneumoniae PNI0007]
gi|444268011|gb|ELU73890.1| exodeoxyribonuclease III [Streptococcus pneumoniae PNI0008]
gi|444268144|gb|ELU74019.1| exodeoxyribonuclease III [Streptococcus pneumoniae PNI0009]
gi|444271499|gb|ELU77250.1| exodeoxyribonuclease III [Streptococcus pneumoniae PNI0010]
gi|444274214|gb|ELU79869.1| exodeoxyribonuclease III [Streptococcus pneumoniae PNI0153]
gi|444278052|gb|ELU83532.1| exodeoxyribonuclease III [Streptococcus pneumoniae PNI0076]
gi|444281247|gb|ELU86576.1| exodeoxyribonuclease III [Streptococcus pneumoniae PNI0199]
gi|444283604|gb|ELU88796.1| exodeoxyribonuclease III [Streptococcus pneumoniae PNI0427]
gi|444285073|gb|ELU90164.1| exodeoxyribonuclease III [Streptococcus pneumoniae PNI0360]
gi|444288755|gb|ELU93644.1| exodeoxyribonuclease III [Streptococcus pneumoniae PNI0446]
Length = 275
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQV-WDAKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHVHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIDL 275
>gi|331265838|ref|YP_004325468.1| exodeoxyribonuclease III [Streptococcus oralis Uo5]
gi|326682510|emb|CBZ00127.1| exodeoxyribonuclease III [Streptococcus oralis Uo5]
Length = 275
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDTFFVTQVYTPNAGDGLKRLDERQV-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPECYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVLEIEL 275
>gi|421225677|ref|ZP_15682415.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2070768]
gi|395589164|gb|EJG49486.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2070768]
Length = 275
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHVHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKLTKSDMIDSGARQDHTPIVLEIDL 275
>gi|148989637|ref|ZP_01820969.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP6-BS73]
gi|421234747|ref|ZP_15691364.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2061617]
gi|421250084|ref|ZP_15706540.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2082239]
gi|147924954|gb|EDK76036.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP6-BS73]
gi|395599800|gb|EJG59962.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2061617]
gi|395613055|gb|EJG73087.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2082239]
Length = 275
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQV-WDTKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHVHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIDL 275
>gi|338175515|ref|YP_004652325.1| exodeoxyribonuclease [Parachlamydia acanthamoebae UV-7]
gi|336479873|emb|CCB86471.1| exodeoxyribonuclease [Parachlamydia acanthamoebae UV-7]
Length = 251
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 111/181 (61%), Gaps = 1/181 (0%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL+V G+ + HD EGR +T E+ +FFL++ YVPNS L RL YR +WD +Y+
Sbjct: 72 KPLNVENGILLDLHDKEGRTITLEYPTFFLVNVYVPNSKRDLSRLEYRCKQWDVDFLNYL 131
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
K +E+KKPVI GDLN AH E D+ P N + GFT EER F + + GFVD FR
Sbjct: 132 KNIERKKPVIFCGDLNVAHTENDLAFPKANINNHGFTAEERAGFD-HIVESGFVDIFREF 190
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ YT+W + R+ + GWR+DYFL+S SL + + IL DV GSDH PI L L
Sbjct: 191 EKSSGHYTWWSQFNRCRERDIGWRIDYFLISPSLRSRIKKASILKDVMGSDHCPITLELS 250
Query: 182 L 182
L
Sbjct: 251 L 251
>gi|313891277|ref|ZP_07824895.1| exodeoxyribonuclease III [Streptococcus pseudoporcinus SPIN 20026]
gi|416852294|ref|ZP_11909439.1| exodeoxyribonuclease III [Streptococcus pseudoporcinus LQ 940-04]
gi|313120344|gb|EFR43465.1| exodeoxyribonuclease III [Streptococcus pseudoporcinus SPIN 20026]
gi|356739783|gb|EHI65015.1| exodeoxyribonuclease III [Streptococcus pseudoporcinus LQ 940-04]
Length = 275
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 110/169 (65%), Gaps = 4/169 (2%)
Query: 16 DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVILTGD 75
DSEGR++T EF+ FF+ Y PN+GDGLRRL+ R EWD + Y+ +L+ +KPV+ TGD
Sbjct: 109 DSEGRIITLEFEDFFVTQVYTPNAGDGLRRLADR-QEWDIKYADYLTQLDAQKPVLATGD 167
Query: 76 LNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYWGYR 134
N AH+EID+ NP+ NRRSAGFTDEER F A L KGF DTFR H + YT+W R
Sbjct: 168 YNVAHKEIDLANPSSNRRSAGFTDEERAGFTA-LLEKGFTDTFRHLHGDLPNVYTWWAQR 226
Query: 135 HGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 227 SKTSKMNNTGWRIDYWLTSNRIADKVLKSEMIDSGARQDHTPILLEIDL 275
>gi|419767683|ref|ZP_14293831.1| exodeoxyribonuclease III [Streptococcus mitis SK579]
gi|383352836|gb|EID30468.1| exodeoxyribonuclease III [Streptococcus mitis SK579]
Length = 275
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDEFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIEL 275
>gi|400289764|ref|ZP_10791791.1| putative exodeoxyribonuclease III [Streptococcus ratti FA-1 = DSM
20564]
gi|399920555|gb|EJN93372.1| putative exodeoxyribonuclease III [Streptococcus ratti FA-1 = DSM
20564]
Length = 275
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 120/186 (64%), Gaps = 7/186 (3%)
Query: 1 IKPLSVTY-GLGI-SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLS 58
+KP +VTY +G + D+EGR++T EFD FF+ Y PN+GDGLRRL R WD +
Sbjct: 93 LKP-TVTYPNIGAPATMDAEGRIITLEFDHFFVTQVYTPNAGDGLRRLEERQI-WDEKYA 150
Query: 59 SYVKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTF 118
+Y+ +L+K+KPV+ GD N AHQEID+ +PA NRRS GFTDEER F N L+KGF DTF
Sbjct: 151 AYLADLDKQKPVLAAGDYNVAHQEIDLAHPASNRRSPGFTDEERAGF-TNLLAKGFTDTF 209
Query: 119 RAQHRGVVG-YTYWGYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPI 176
R H + Y++W R K N GWR+DY+L S +ADK S ++ T DH+PI
Sbjct: 210 RYIHGDIPDVYSWWAQRSKTSKINNSGWRIDYWLTSNRIADKVLKSEMIDSGTRQDHTPI 269
Query: 177 GLILKL 182
L + L
Sbjct: 270 LLEIDL 275
>gi|169833563|ref|YP_001695212.1| exodeoxyribonuclease III [Streptococcus pneumoniae Hungary19A-6]
gi|168996065|gb|ACA36677.1| exodeoxyribonuclease III [Streptococcus pneumoniae Hungary19A-6]
Length = 275
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHVHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIDL 275
>gi|419508926|ref|ZP_14048577.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA49542]
gi|379610880|gb|EHZ75610.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA49542]
Length = 275
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDEFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIEL 275
>gi|418167459|ref|ZP_12804113.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17971]
gi|353828625|gb|EHE08763.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17971]
Length = 275
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHVHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIDL 275
>gi|418183373|ref|ZP_12819930.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA43380]
gi|353847802|gb|EHE27822.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA43380]
Length = 275
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERTGF-TNLLATGFTDTFRHVHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIDL 275
>gi|417924343|ref|ZP_12567787.1| exodeoxyribonuclease III [Streptococcus mitis SK569]
gi|342836002|gb|EGU70227.1| exodeoxyribonuclease III [Streptococcus mitis SK569]
Length = 275
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDKFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIEL 275
>gi|319947397|ref|ZP_08021629.1| exodeoxyribonuclease [Streptococcus australis ATCC 700641]
gi|417918998|ref|ZP_12562542.1| exodeoxyribonuclease III [Streptococcus australis ATCC 700641]
gi|319746337|gb|EFV98598.1| exodeoxyribonuclease [Streptococcus australis ATCC 700641]
gi|342835149|gb|EGU69406.1| exodeoxyribonuclease III [Streptococcus australis ATCC 700641]
Length = 275
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 109/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+++KPV+
Sbjct: 106 STMDVEGRIITLEFDDFFVTQVYTPNAGDGLKRLEERQI-WDAKYADYLAELDQQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+KGF DTFR H + YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLAKGFTDTFRHLHGDLPDQYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSAMIDSGARQDHTPIVMEIDL 275
>gi|148984296|ref|ZP_01817591.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP3-BS71]
gi|225859607|ref|YP_002741117.1| exodeoxyribonuclease III [Streptococcus pneumoniae 70585]
gi|225861640|ref|YP_002743149.1| exodeoxyribonuclease III [Streptococcus pneumoniae Taiwan19F-14]
gi|298230311|ref|ZP_06963992.1| exodeoxyribonuclease III [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298254703|ref|ZP_06978289.1| exodeoxyribonuclease III [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298503568|ref|YP_003725508.1| exodeoxyribonuclease III [Streptococcus pneumoniae TCH8431/19A]
gi|387758038|ref|YP_006065017.1| exodeoxyribonuclease [Streptococcus pneumoniae OXC141]
gi|387788861|ref|YP_006253929.1| exodeoxyribonuclease III [Streptococcus pneumoniae ST556]
gi|417313298|ref|ZP_12100010.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA04375]
gi|417687305|ref|ZP_12336579.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA41301]
gi|418083627|ref|ZP_12720824.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA44288]
gi|418085810|ref|ZP_12722989.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47281]
gi|418094613|ref|ZP_12731740.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA49138]
gi|418101279|ref|ZP_12738362.1| exodeoxyribonuclease III [Streptococcus pneumoniae 7286-06]
gi|418119275|ref|ZP_12756232.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA18523]
gi|418142339|ref|ZP_12779151.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA13455]
gi|418151328|ref|ZP_12788074.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA14798]
gi|418153568|ref|ZP_12790306.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA16121]
gi|418158135|ref|ZP_12794851.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA16833]
gi|418160572|ref|ZP_12797271.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17227]
gi|418171957|ref|ZP_12808581.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA19451]
gi|418196476|ref|ZP_12832952.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47688]
gi|418198652|ref|ZP_12835110.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47778]
gi|418224019|ref|ZP_12850659.1| exodeoxyribonuclease III [Streptococcus pneumoniae 5185-06]
gi|418228328|ref|ZP_12854945.1| exodeoxyribonuclease III [Streptococcus pneumoniae 3063-00]
gi|418232832|ref|ZP_12859418.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA07228]
gi|418237285|ref|ZP_12863851.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA19690]
gi|419425759|ref|ZP_13965955.1| exodeoxyribonuclease III [Streptococcus pneumoniae 7533-05]
gi|419427873|ref|ZP_13968054.1| exodeoxyribonuclease III [Streptococcus pneumoniae 5652-06]
gi|419430018|ref|ZP_13970182.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA11856]
gi|419436612|ref|ZP_13976699.1| exodeoxyribonuclease III [Streptococcus pneumoniae 8190-05]
gi|419438862|ref|ZP_13978930.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA13499]
gi|419443311|ref|ZP_13983336.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA13224]
gi|419445328|ref|ZP_13985343.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA19923]
gi|419447483|ref|ZP_13987488.1| exodeoxyribonuclease III [Streptococcus pneumoniae 7879-04]
gi|419449605|ref|ZP_13989601.1| exodeoxyribonuclease III [Streptococcus pneumoniae 4075-00]
gi|419450801|ref|ZP_13990787.1| exodeoxyribonuclease III [Streptococcus pneumoniae EU-NP02]
gi|419480652|ref|ZP_14020456.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA19101]
gi|419493948|ref|ZP_14033673.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47210]
gi|419500358|ref|ZP_14040052.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47597]
gi|419502470|ref|ZP_14042154.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47628]
gi|419519531|ref|ZP_14059137.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA08825]
gi|419521786|ref|ZP_14061381.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA05245]
gi|419528158|ref|ZP_14067701.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17719]
gi|421207269|ref|ZP_15664320.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2090008]
gi|421230443|ref|ZP_15687106.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2061376]
gi|421269026|ref|ZP_15719894.1| exodeoxyribonuclease III [Streptococcus pneumoniae SPAR95]
gi|421288087|ref|ZP_15738850.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA58771]
gi|421290394|ref|ZP_15741144.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA54354]
gi|421292706|ref|ZP_15743440.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA56348]
gi|421305785|ref|ZP_15756439.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA62331]
gi|421312648|ref|ZP_15763249.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA58981]
gi|147923585|gb|EDK74698.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP3-BS71]
gi|225720715|gb|ACO16569.1| exodeoxyribonuclease III [Streptococcus pneumoniae 70585]
gi|225726783|gb|ACO22634.1| exodeoxyribonuclease III [Streptococcus pneumoniae Taiwan19F-14]
gi|298239163|gb|ADI70294.1| exodeoxyribonuclease III [Streptococcus pneumoniae TCH8431/19A]
gi|301800627|emb|CBW33270.1| exodeoxyribonuclease [Streptococcus pneumoniae OXC141]
gi|327390006|gb|EGE88351.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA04375]
gi|332074195|gb|EGI84673.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA41301]
gi|353754847|gb|EHD35459.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA44288]
gi|353756519|gb|EHD37120.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47281]
gi|353765109|gb|EHD45657.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA49138]
gi|353770779|gb|EHD51291.1| exodeoxyribonuclease III [Streptococcus pneumoniae 7286-06]
gi|353791227|gb|EHD71608.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA18523]
gi|353804572|gb|EHD84853.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA13455]
gi|353814538|gb|EHD94764.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA14798]
gi|353817119|gb|EHD97327.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA16121]
gi|353822305|gb|EHE02481.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17227]
gi|353824583|gb|EHE04757.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA16833]
gi|353835694|gb|EHE15788.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA19451]
gi|353860487|gb|EHE40432.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47688]
gi|353861762|gb|EHE41697.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47778]
gi|353878817|gb|EHE58647.1| exodeoxyribonuclease III [Streptococcus pneumoniae 5185-06]
gi|353880723|gb|EHE60538.1| exodeoxyribonuclease III [Streptococcus pneumoniae 3063-00]
gi|353886145|gb|EHE65929.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA07228]
gi|353891723|gb|EHE71477.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA19690]
gi|379138603|gb|AFC95394.1| exodeoxyribonuclease III [Streptococcus pneumoniae ST556]
gi|379537269|gb|EHZ02454.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA13499]
gi|379539086|gb|EHZ04266.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA05245]
gi|379550196|gb|EHZ15298.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA11856]
gi|379550343|gb|EHZ15444.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA13224]
gi|379566311|gb|EHZ31302.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17719]
gi|379569821|gb|EHZ34788.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA19101]
gi|379573021|gb|EHZ37978.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA19923]
gi|379592521|gb|EHZ57337.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47210]
gi|379599666|gb|EHZ64449.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47597]
gi|379600683|gb|EHZ65464.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47628]
gi|379613051|gb|EHZ77766.1| exodeoxyribonuclease III [Streptococcus pneumoniae 8190-05]
gi|379615023|gb|EHZ79733.1| exodeoxyribonuclease III [Streptococcus pneumoniae 7879-04]
gi|379618066|gb|EHZ82746.1| exodeoxyribonuclease III [Streptococcus pneumoniae 5652-06]
gi|379619220|gb|EHZ83894.1| exodeoxyribonuclease III [Streptococcus pneumoniae 7533-05]
gi|379622223|gb|EHZ86859.1| exodeoxyribonuclease III [Streptococcus pneumoniae 4075-00]
gi|379622506|gb|EHZ87140.1| exodeoxyribonuclease III [Streptococcus pneumoniae EU-NP02]
gi|379641368|gb|EIA05906.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA08825]
gi|395573991|gb|EJG34576.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2090008]
gi|395593455|gb|EJG53703.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2061376]
gi|395868074|gb|EJG79193.1| exodeoxyribonuclease III [Streptococcus pneumoniae SPAR95]
gi|395886650|gb|EJG97666.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA58771]
gi|395888079|gb|EJG99093.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA54354]
gi|395892013|gb|EJH03007.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA56348]
gi|395904743|gb|EJH15657.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA62331]
gi|395908442|gb|EJH19321.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA58981]
gi|429316646|emb|CCP36359.1| exodeoxyribonuclease [Streptococcus pneumoniae SPN034156]
gi|429320006|emb|CCP33330.1| exodeoxyribonuclease [Streptococcus pneumoniae SPN034183]
gi|429321824|emb|CCP35304.1| exodeoxyribonuclease [Streptococcus pneumoniae SPN994039]
gi|429323644|emb|CCP31345.1| exodeoxyribonuclease [Streptococcus pneumoniae SPN994038]
Length = 275
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHVHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIDL 275
>gi|419780861|ref|ZP_14306700.1| exodeoxyribonuclease III [Streptococcus oralis SK100]
gi|383184861|gb|EIC77368.1| exodeoxyribonuclease III [Streptococcus oralis SK100]
Length = 275
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ +L+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDTFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAQLDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHVHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVLEIEL 275
>gi|392330776|ref|ZP_10275391.1| exodeoxyribonuclease III [Streptococcus canis FSL Z3-227]
gi|391418455|gb|EIQ81267.1| exodeoxyribonuclease III [Streptococcus canis FSL Z3-227]
Length = 275
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 109/169 (64%), Gaps = 4/169 (2%)
Query: 16 DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVILTGD 75
D+EGR++T EF+ FF+ Y PN+GDGLRRL R WD + Y+ EL+ +KPV+ TGD
Sbjct: 109 DAEGRIITLEFEEFFVTQVYTPNAGDGLRRLEDRQI-WDQKYADYLAELDAQKPVLATGD 167
Query: 76 LNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYWGYR 134
N AH+EID+ NP+ NRRS GFTDEERQ F N L++GF DTFR H + YT+W R
Sbjct: 168 YNVAHKEIDLANPSSNRRSPGFTDEERQGF-TNLLARGFTDTFRQLHGDIPNVYTWWAQR 226
Query: 135 HGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
K N GWR+DY+L S L DK + S ++ DH+PI L + L
Sbjct: 227 SKTSKINNTGWRIDYWLTSNRLVDKINRSEMISSGERQDHTPILLDIDL 275
>gi|148993303|ref|ZP_01822843.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP9-BS68]
gi|148998707|ref|ZP_01826145.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP11-BS70]
gi|149006502|ref|ZP_01830201.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP18-BS74]
gi|168487344|ref|ZP_02711852.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC1087-00]
gi|168489877|ref|ZP_02714076.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP195]
gi|168491840|ref|ZP_02715983.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC0288-04]
gi|168574966|ref|ZP_02720929.1| exodeoxyribonuclease III [Streptococcus pneumoniae MLV-016]
gi|182684788|ref|YP_001836535.1| exodeoxyribonuclease [Streptococcus pneumoniae CGSP14]
gi|221232582|ref|YP_002511736.1| exodeoxyribonuclease [Streptococcus pneumoniae ATCC 700669]
gi|225855280|ref|YP_002736792.1| exodeoxyribonuclease III [Streptococcus pneumoniae JJA]
gi|303254644|ref|ZP_07340746.1| exodeoxyribonuclease [Streptococcus pneumoniae BS455]
gi|307068457|ref|YP_003877423.1| exonuclease III [Streptococcus pneumoniae AP200]
gi|307128039|ref|YP_003880070.1| exodeoxyribonuclease III [Streptococcus pneumoniae 670-6B]
gi|387627022|ref|YP_006063198.1| exodeoxyribonuclease [Streptococcus pneumoniae INV104]
gi|387759948|ref|YP_006066926.1| exodeoxyribonuclease [Streptococcus pneumoniae INV200]
gi|415700332|ref|ZP_11458034.1| exodeoxyribonuclease III [Streptococcus pneumoniae 459-5]
gi|415748266|ref|ZP_11476399.1| exodeoxyribonuclease III [Streptococcus pneumoniae SV35]
gi|415753047|ref|ZP_11480029.1| exodeoxyribonuclease III [Streptococcus pneumoniae SV36]
gi|417677554|ref|ZP_12326961.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17545]
gi|417679801|ref|ZP_12329197.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17570]
gi|417694704|ref|ZP_12343891.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47901]
gi|417699218|ref|ZP_12348389.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA41317]
gi|418096963|ref|ZP_12734073.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA16531]
gi|418113168|ref|ZP_12750168.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA41538]
gi|418115369|ref|ZP_12752355.1| exodeoxyribonuclease III [Streptococcus pneumoniae 5787-06]
gi|418124193|ref|ZP_12761123.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA44378]
gi|418128730|ref|ZP_12765622.1| exodeoxyribonuclease III [Streptococcus pneumoniae NP170]
gi|418133284|ref|ZP_12770154.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA11304]
gi|418137936|ref|ZP_12774773.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA11663]
gi|418149188|ref|ZP_12785950.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA13856]
gi|418155812|ref|ZP_12792539.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA16242]
gi|418165119|ref|ZP_12801787.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17371]
gi|418178964|ref|ZP_12815545.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA41565]
gi|418185588|ref|ZP_12822128.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47283]
gi|418190073|ref|ZP_12826585.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47373]
gi|418192271|ref|ZP_12828773.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47388]
gi|418194385|ref|ZP_12830874.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47439]
gi|418200938|ref|ZP_12837380.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47976]
gi|418215024|ref|ZP_12841758.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA54644]
gi|418226210|ref|ZP_12852838.1| exodeoxyribonuclease III [Streptococcus pneumoniae NP112]
gi|418235031|ref|ZP_12861607.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA08780]
gi|419432231|ref|ZP_13972364.1| exodeoxyribonuclease III [Streptococcus pneumoniae EU-NP05]
gi|419453652|ref|ZP_13993622.1| exodeoxyribonuclease III [Streptococcus pneumoniae EU-NP03]
gi|419467439|ref|ZP_14007320.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA05248]
gi|419471724|ref|ZP_14011583.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA07914]
gi|419473916|ref|ZP_14013764.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA13430]
gi|419482865|ref|ZP_14022652.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA40563]
gi|419485048|ref|ZP_14024823.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA43257]
gi|419496016|ref|ZP_14035733.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47461]
gi|419498219|ref|ZP_14037926.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47522]
gi|419504563|ref|ZP_14044231.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47760]
gi|419506712|ref|ZP_14046373.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA49194]
gi|419511089|ref|ZP_14050730.1| exodeoxyribonuclease III [Streptococcus pneumoniae NP141]
gi|419513217|ref|ZP_14052849.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA05578]
gi|419515347|ref|ZP_14054972.1| exodeoxyribonuclease III [Streptococcus pneumoniae England14-9]
gi|419517421|ref|ZP_14057037.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA02506]
gi|419524161|ref|ZP_14063734.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA13723]
gi|419530887|ref|ZP_14070413.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA40028]
gi|421209601|ref|ZP_15666614.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2070005]
gi|421211687|ref|ZP_15668669.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2070035]
gi|421213769|ref|ZP_15670723.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2070108]
gi|421215913|ref|ZP_15672834.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2070109]
gi|421218494|ref|ZP_15675388.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2070335]
gi|421220913|ref|ZP_15677751.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2070425]
gi|421223167|ref|ZP_15679949.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2070531]
gi|421228062|ref|ZP_15684760.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2072047]
gi|421232523|ref|ZP_15689164.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2080076]
gi|421239165|ref|ZP_15695729.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2071247]
gi|421245669|ref|ZP_15702167.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2081685]
gi|421279607|ref|ZP_15730413.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17301]
gi|421283963|ref|ZP_15734749.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA04216]
gi|421294674|ref|ZP_15745395.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA56113]
gi|421299308|ref|ZP_15749995.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA60080]
gi|421301673|ref|ZP_15752343.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA19998]
gi|421302702|ref|ZP_15753366.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17484]
gi|421310252|ref|ZP_15760877.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA62681]
gi|421314701|ref|ZP_15765288.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47562]
gi|444383557|ref|ZP_21181745.1| exodeoxyribonuclease III [Streptococcus pneumoniae PCS8106]
gi|444386193|ref|ZP_21184255.1| exodeoxyribonuclease III [Streptococcus pneumoniae PCS8203]
gi|147755401|gb|EDK62450.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP11-BS70]
gi|147761800|gb|EDK68763.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP18-BS74]
gi|147928070|gb|EDK79089.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP9-BS68]
gi|182630122|gb|ACB91070.1| exodeoxyribonuclease [Streptococcus pneumoniae CGSP14]
gi|183569805|gb|EDT90333.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC1087-00]
gi|183571693|gb|EDT92221.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP195]
gi|183573869|gb|EDT94397.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC0288-04]
gi|183578942|gb|EDT99470.1| exodeoxyribonuclease III [Streptococcus pneumoniae MLV-016]
gi|220675044|emb|CAR69622.1| exodeoxyribonuclease [Streptococcus pneumoniae ATCC 700669]
gi|225724139|gb|ACO19992.1| exodeoxyribonuclease III [Streptococcus pneumoniae JJA]
gi|301794808|emb|CBW37264.1| exodeoxyribonuclease [Streptococcus pneumoniae INV104]
gi|301802537|emb|CBW35298.1| exodeoxyribonuclease [Streptococcus pneumoniae INV200]
gi|302598356|gb|EFL65400.1| exodeoxyribonuclease [Streptococcus pneumoniae BS455]
gi|306409994|gb|ADM85421.1| Exonuclease III [Streptococcus pneumoniae AP200]
gi|306485101|gb|ADM91970.1| exodeoxyribonuclease III [Streptococcus pneumoniae 670-6B]
gi|332072666|gb|EGI83149.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17570]
gi|332072995|gb|EGI83476.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17545]
gi|332199864|gb|EGJ13939.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA41317]
gi|332201253|gb|EGJ15324.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47901]
gi|353767948|gb|EHD48476.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA16531]
gi|353783530|gb|EHD63959.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA41538]
gi|353785453|gb|EHD65872.1| exodeoxyribonuclease III [Streptococcus pneumoniae 5787-06]
gi|353795335|gb|EHD75685.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA44378]
gi|353798726|gb|EHD79054.1| exodeoxyribonuclease III [Streptococcus pneumoniae NP170]
gi|353804726|gb|EHD85006.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA11304]
gi|353811524|gb|EHD91766.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA13856]
gi|353820061|gb|EHE00250.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA16242]
gi|353828951|gb|EHE09087.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17371]
gi|353841915|gb|EHE21967.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA41565]
gi|353848318|gb|EHE28334.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47283]
gi|353853800|gb|EHE33781.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47373]
gi|353855357|gb|EHE35327.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47388]
gi|353857963|gb|EHE37925.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47439]
gi|353863886|gb|EHE43806.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47976]
gi|353869754|gb|EHE49635.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA54644]
gi|353881407|gb|EHE61221.1| exodeoxyribonuclease III [Streptococcus pneumoniae NP112]
gi|353886653|gb|EHE66435.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA08780]
gi|353900244|gb|EHE75802.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA11663]
gi|379543186|gb|EHZ08338.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA05248]
gi|379546440|gb|EHZ11579.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA07914]
gi|379550434|gb|EHZ15534.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA13430]
gi|379555874|gb|EHZ20935.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA13723]
gi|379571296|gb|EHZ36254.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA40028]
gi|379579457|gb|EHZ44364.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA40563]
gi|379581801|gb|EHZ46685.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA43257]
gi|379594102|gb|EHZ58913.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47461]
gi|379599052|gb|EHZ63837.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47522]
gi|379605951|gb|EHZ70701.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47760]
gi|379608626|gb|EHZ73372.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA49194]
gi|379625722|gb|EHZ90348.1| exodeoxyribonuclease III [Streptococcus pneumoniae EU-NP03]
gi|379629312|gb|EHZ93913.1| exodeoxyribonuclease III [Streptococcus pneumoniae EU-NP05]
gi|379631692|gb|EHZ96269.1| exodeoxyribonuclease III [Streptococcus pneumoniae NP141]
gi|379634382|gb|EHZ98947.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA05578]
gi|379635896|gb|EIA00455.1| exodeoxyribonuclease III [Streptococcus pneumoniae England14-9]
gi|379639494|gb|EIA04038.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA02506]
gi|381308694|gb|EIC49537.1| exodeoxyribonuclease III [Streptococcus pneumoniae SV36]
gi|381314483|gb|EIC55252.1| exodeoxyribonuclease III [Streptococcus pneumoniae 459-5]
gi|381319338|gb|EIC60049.1| exodeoxyribonuclease III [Streptococcus pneumoniae SV35]
gi|395572795|gb|EJG33390.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2070035]
gi|395573697|gb|EJG34287.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2070005]
gi|395579000|gb|EJG39510.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2070108]
gi|395580120|gb|EJG40615.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2070109]
gi|395583263|gb|EJG43712.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2070335]
gi|395586384|gb|EJG46755.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2070425]
gi|395587147|gb|EJG47509.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2070531]
gi|395593220|gb|EJG53470.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2072047]
gi|395595026|gb|EJG55261.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2080076]
gi|395600808|gb|EJG60963.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2071247]
gi|395608196|gb|EJG68292.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2081685]
gi|395879100|gb|EJG90162.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17301]
gi|395880649|gb|EJG91701.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA04216]
gi|395893243|gb|EJH04230.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA56113]
gi|395899233|gb|EJH10177.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA19998]
gi|395900779|gb|EJH11717.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA60080]
gi|395901324|gb|EJH12260.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17484]
gi|395909867|gb|EJH20742.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA62681]
gi|395913386|gb|EJH24239.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47562]
gi|444248128|gb|ELU54644.1| exodeoxyribonuclease III [Streptococcus pneumoniae PCS8203]
gi|444249074|gb|ELU55570.1| exodeoxyribonuclease III [Streptococcus pneumoniae PCS8106]
Length = 275
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHVHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIDL 275
>gi|422758386|ref|ZP_16812148.1| exodeoxyribonuclease III [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322411221|gb|EFY02129.1| exodeoxyribonuclease III [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 275
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 108/169 (63%), Gaps = 4/169 (2%)
Query: 16 DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVILTGD 75
D+EGR++T EF+ FF+ Y PN+GDGLRRL R WD + Y+ EL+ +KPV+ TGD
Sbjct: 109 DAEGRMITLEFEDFFVTQVYTPNAGDGLRRLEDRQI-WDQKYADYLAELDAQKPVLATGD 167
Query: 76 LNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYWGYR 134
N AH+EID+ NP NRRS GFTDEERQ F N L+KGF DTFR H + YT+W R
Sbjct: 168 YNVAHKEIDLANPGSNRRSPGFTDEERQGF-TNLLAKGFTDTFRHLHGDIPNVYTWWAQR 226
Query: 135 HGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
K N GWR+DY+L S L DK + S ++ DH+PI L + L
Sbjct: 227 SKTSKINNTGWRIDYWLTSNRLVDKINRSEMISSGERQDHTPILLDIDL 275
>gi|419778678|ref|ZP_14304565.1| exodeoxyribonuclease III [Streptococcus oralis SK10]
gi|383187100|gb|EIC79559.1| exodeoxyribonuclease III [Streptococcus oralis SK10]
Length = 275
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ +L+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDTFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAQLDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVLEIEL 275
>gi|322375755|ref|ZP_08050267.1| exodeoxyribonuclease III [Streptococcus sp. C300]
gi|321279463|gb|EFX56504.1| exodeoxyribonuclease III [Streptococcus sp. C300]
Length = 275
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ +L+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDTFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAQLDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVLEIEL 275
>gi|418974501|ref|ZP_13522411.1| exodeoxyribonuclease III [Streptococcus oralis SK1074]
gi|383348928|gb|EID26880.1| exodeoxyribonuclease III [Streptococcus oralis SK1074]
Length = 275
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ +L+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDTFFVTQVYTPNAGDGLKRLEERQV-WDIKYAEYLAQLDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHLHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVLEIEL 275
>gi|417915265|ref|ZP_12558883.1| exodeoxyribonuclease III [Streptococcus mitis bv. 2 str. SK95]
gi|342835178|gb|EGU69434.1| exodeoxyribonuclease III [Streptococcus mitis bv. 2 str. SK95]
Length = 275
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDTFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +AD+ S ++ DH+PI L ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADRVTKSDMIDSGARQDHTPIVLEIEL 275
>gi|417934993|ref|ZP_12578313.1| exodeoxyribonuclease III [Streptococcus mitis bv. 2 str. F0392]
gi|340771563|gb|EGR94078.1| exodeoxyribonuclease III [Streptococcus mitis bv. 2 str. F0392]
Length = 275
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDEFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H + YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHLHGDIPNQYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVMEIEL 275
>gi|307709700|ref|ZP_07646152.1| exodeoxyribonuclease III [Streptococcus mitis SK564]
gi|307619598|gb|EFN98722.1| exodeoxyribonuclease III [Streptococcus mitis SK564]
Length = 275
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDKFFVTQVYTPNAGDGLKRLEERQI-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIEL 275
>gi|309798809|ref|ZP_07693073.1| exodeoxyribonuclease III [Streptococcus infantis SK1302]
gi|308117626|gb|EFO55038.1| exodeoxyribonuclease III [Streptococcus infantis SK1302]
Length = 217
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 113/172 (65%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S DSEGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ +L+K+K V+
Sbjct: 48 STMDSEGRIITLEFDTFFVTQVYTPNAGDGLKRLEDRQV-WDVKYAEYLAQLDKQKSVLA 106
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER+ F +N L+KGF DTFR H V YT+W
Sbjct: 107 TGDYNVAHKEIDLANPASNRRSPGFTDEEREGF-SNLLAKGFTDTFRHIHGDVPERYTWW 165
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 166 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVMEIEL 217
>gi|347753480|ref|YP_004861045.1| exodeoxyribonuclease III [Bacillus coagulans 36D1]
gi|347585998|gb|AEP02265.1| exodeoxyribonuclease III [Bacillus coagulans 36D1]
Length = 251
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 119/178 (66%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YG+G + EGR++T E++ F+L++ Y PNS L RL YR+ EW+ + +Y+
Sbjct: 72 EPLSVRYGVGEDRTEPEGRILTLEYEDFYLVNVYTPNSQRDLARLGYRL-EWEDRMRAYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL+KKKPVI+ GD+N AHQEID+ N N ++GFT EER L+ GF+D+FR
Sbjct: 131 TELDKKKPVIVCGDMNVAHQEIDLKNAKNNVGNSGFTAEERGKM-TGLLNSGFIDSFRYF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+ G YT+W Y + R+ N GWR+DYFLVS+ LA + D+ + P++ GSDH P+ L
Sbjct: 190 YPEREGAYTWWSYMNKVRERNIGWRIDYFLVSKRLAGRLKDAGMYPEIMGSDHCPVFL 247
>gi|385262910|ref|ZP_10041008.1| exodeoxyribonuclease III [Streptococcus sp. SK643]
gi|385189405|gb|EIF36870.1| exodeoxyribonuclease III [Streptococcus sp. SK643]
Length = 275
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDEFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLTELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPEHYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVMEIEL 275
>gi|417849481|ref|ZP_12495401.1| exodeoxyribonuclease III [Streptococcus mitis SK1080]
gi|339456075|gb|EGP68670.1| exodeoxyribonuclease III [Streptococcus mitis SK1080]
Length = 275
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDEFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHVHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVMEIEL 275
>gi|270293121|ref|ZP_06199332.1| exodeoxyribonuclease [Streptococcus sp. M143]
gi|270279100|gb|EFA24946.1| exodeoxyribonuclease [Streptococcus sp. M143]
Length = 275
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDEFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHVHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVMEIEL 275
>gi|238854034|ref|ZP_04644388.1| exodeoxyribonuclease III [Lactobacillus gasseri 202-4]
gi|238833354|gb|EEQ25637.1| exodeoxyribonuclease III [Lactobacillus gasseri 202-4]
Length = 254
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 114/181 (62%), Gaps = 2/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP++V G G+ + D EGR +T EF +F+ + VP SG+ L+RL +R W + +YV
Sbjct: 72 KPITVANGFGVPEVDGEGRSITLEFPNFYFIDVQVPFSGEKLQRLDFR-ELWAQTFRNYV 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+L + KPVI+ GD++ AH++ID+ P N R AGFT ER+ F + L+ GF+DTFR
Sbjct: 131 TKLMQYKPVIIGGDMSVAHEKIDLAEPDDNHRHAGFTGIERKEF-SELLNAGFIDTFRYF 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
H YTYW YR R N GWRLDYFL S +L DK ++ IL ++ GSDH PI L L
Sbjct: 190 HPDEAKYTYWSYREDARAKNIGWRLDYFLASHNLEDKMINTKILNNIMGSDHCPIELDLD 249
Query: 182 L 182
+
Sbjct: 250 I 250
>gi|325970995|ref|YP_004247186.1| exodeoxyribonuclease III Xth [Sphaerochaeta globus str. Buddy]
gi|324026233|gb|ADY12992.1| exodeoxyribonuclease III Xth [Sphaerochaeta globus str. Buddy]
Length = 250
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 115/180 (63%), Gaps = 4/180 (2%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+SV G+G D+EGR VTAEF+ F+++ CY PNS + L RL R+ +WD + SYV
Sbjct: 72 EPVSVQRGIG-HPLDNEGRTVTAEFEQFYVVCCYTPNSQEALARLDTRM-DWDEAFRSYV 129
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L KPVI+ GDLN AHQ ID+ +P N R+AG++ EER F + L GF+DTFR
Sbjct: 130 CSLASMKPVIICGDLNVAHQSIDLRHPKANERNAGYSIEERNQF-TSLLDAGFIDTFRYL 188
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ G Y++W YR R+ N GWR+DY+LVS+ L DS I + GSDH+P+ L L
Sbjct: 189 YPNREGIYSWWSYRFKARENNAGWRIDYWLVSEELRQSILDSTIDTETQGSDHAPVILYL 248
>gi|167521904|ref|XP_001745290.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776248|gb|EDQ89868.1| predicted protein [Monosiga brevicollis MX1]
Length = 263
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 113/182 (62%), Gaps = 6/182 (3%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+ LSV YG+ + HD EGR +T E F++ YVPNSG L+RL YR+ EW+ +Y+
Sbjct: 82 RALSVQYGIKSAHHDQEGRTITVELPDLFVIGVYVPNSGQDLKRLDYRLNEWNVDFLAYI 141
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFR-- 119
+ELE KPV++ GDLN AH ++DIYN +SAG T +ER +F FL +GF DTFR
Sbjct: 142 RELEASKPVLVVGDLNVAHLDLDIYNAGHLVKSAGCTPQERTAF-TEFLDQGFTDTFRKL 200
Query: 120 -AQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
+H G +TYW R GGR+ ++G RLDY + S +L + L V GSDH PI +
Sbjct: 201 YPEHTG--AFTYWSARTGGRQDSKGLRLDYAVCSNALLEANSPLRCLDSVMGSDHCPIAI 258
Query: 179 IL 180
+L
Sbjct: 259 VL 260
>gi|253751487|ref|YP_003024628.1| exodeoxyribonuclease [Streptococcus suis SC84]
gi|253753388|ref|YP_003026529.1| exodeoxyribonuclease [Streptococcus suis P1/7]
gi|253755783|ref|YP_003028923.1| exodeoxyribonuclease [Streptococcus suis BM407]
gi|386577656|ref|YP_006074062.1| exodeoxyribonuclease III [Streptococcus suis GZ1]
gi|386579713|ref|YP_006076118.1| exodeoxyribonuclease [Streptococcus suis JS14]
gi|386581661|ref|YP_006078065.1| exodeoxyribonuclease [Streptococcus suis SS12]
gi|386586274|ref|YP_006082676.1| exodeoxyribonuclease [Streptococcus suis D12]
gi|386587894|ref|YP_006084295.1| exodeoxyribonuclease [Streptococcus suis A7]
gi|403061298|ref|YP_006649514.1| exodeoxyribonuclease [Streptococcus suis S735]
gi|251815776|emb|CAZ51378.1| exodeoxyribonuclease [Streptococcus suis SC84]
gi|251818247|emb|CAZ56055.1| exodeoxyribonuclease [Streptococcus suis BM407]
gi|251819634|emb|CAR45379.1| exodeoxyribonuclease [Streptococcus suis P1/7]
gi|292558119|gb|ADE31120.1| exodeoxyribonuclease III [Streptococcus suis GZ1]
gi|319757905|gb|ADV69847.1| exodeoxyribonuclease [Streptococcus suis JS14]
gi|353733807|gb|AER14817.1| exodeoxyribonuclease [Streptococcus suis SS12]
gi|353738420|gb|AER19428.1| exodeoxyribonuclease [Streptococcus suis D12]
gi|354985055|gb|AER43953.1| exodeoxyribonuclease [Streptococcus suis A7]
gi|402808624|gb|AFR00116.1| exodeoxyribonuclease [Streptococcus suis S735]
gi|451937292|gb|AGF87595.1| putative endonuclease [Streptococcus phage phiD12]
Length = 275
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 109/165 (66%), Gaps = 4/165 (2%)
Query: 16 DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVILTGD 75
DSEGR++T EFD F++ Y PN+GDGL+RL+ R WD + Y+ +L+ KPV+ TGD
Sbjct: 109 DSEGRIITLEFDDFYVTQVYTPNAGDGLKRLADRQI-WDVQYADYLAKLDSHKPVLATGD 167
Query: 76 LNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVV-GYTYWGYR 134
N AH+EID+ NPA NR+S GFTDEERQ F N L+KGF DTFR H V+ YT+W R
Sbjct: 168 YNVAHKEIDLANPASNRQSPGFTDEERQGF-TNLLAKGFTDTFRHLHGDVLNAYTWWAQR 226
Query: 135 HGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
K N GWR+DY+LVS +ADK S ++ DH+PI +
Sbjct: 227 SRTSKINNTGWRIDYWLVSDRIADKVSKSDMIDSGARQDHTPIVM 271
>gi|440793147|gb|ELR14342.1| exodeoxyribonuclease III, putative, partial [Acanthamoeba
castellanii str. Neff]
Length = 384
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 120/206 (58%), Gaps = 28/206 (13%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL V +G+G+ +HD+EGR++T EF F+L+ Y+PNSGD L+RL YR W+ + +Y+
Sbjct: 170 RPLRVHHGIGVEEHDNEGRVITLEFAGFYLVGSYIPNSGDELKRLEYR-QRWNRDMEAYL 228
Query: 62 ------------------KELE---------KKKPVILTGDLNCAHQEIDIYNPAGNRRS 94
ELE K KPVI GDLN AH+EID+++PA N +
Sbjct: 229 LSLSTSGLKAGLDVHPHGHELEYRVLDESERKGKPVIWCGDLNVAHEEIDLHDPANNHYT 288
Query: 95 AGFTDEERQSFGANFLSKGFVDTFRAQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQS 154
+GFTDEER F + FVD++R ++ Y++W YR R N GWRLDYFL ++
Sbjct: 289 SGFTDEERDDFTRVIKTMDFVDSYRHENPTRQSYSFWSYRSAARARNMGWRLDYFLYQRA 348
Query: 155 LADKFHDSYILPDVTGSDHSPIGLIL 180
L ++I V GSDH P+GL+L
Sbjct: 349 LTPYVRKAFIRNFVLGSDHCPVGLLL 374
>gi|389856780|ref|YP_006359023.1| exodeoxyribonuclease [Streptococcus suis ST1]
gi|353740498|gb|AER21505.1| exodeoxyribonuclease [Streptococcus suis ST1]
Length = 275
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 109/165 (66%), Gaps = 4/165 (2%)
Query: 16 DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVILTGD 75
DSEGR++T EFD F++ Y PN+GDGL+RL+ R WD + Y+ +L+ KPV+ TGD
Sbjct: 109 DSEGRIITLEFDDFYVTQVYTPNAGDGLKRLADRQI-WDVQYADYLAKLDSHKPVLATGD 167
Query: 76 LNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVV-GYTYWGYR 134
N AH+EID+ NPA NR+S GFTDEERQ F N L+KGF DTFR H V+ YT+W R
Sbjct: 168 YNVAHKEIDLANPASNRQSPGFTDEERQGF-TNLLAKGFTDTFRHLHGDVLNAYTWWAQR 226
Query: 135 HGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
K N GWR+DY+LVS +ADK S ++ DH+PI +
Sbjct: 227 SRTSKINNTGWRIDYWLVSDRIADKVSKSDMIDSGARQDHTPIVM 271
>gi|223932412|ref|ZP_03624414.1| exodeoxyribonuclease III Xth [Streptococcus suis 89/1591]
gi|330832647|ref|YP_004401472.1| exodeoxyribonuclease [Streptococcus suis ST3]
gi|386583909|ref|YP_006080312.1| exodeoxyribonuclease [Streptococcus suis D9]
gi|223898866|gb|EEF65225.1| exodeoxyribonuclease III Xth [Streptococcus suis 89/1591]
gi|329306870|gb|AEB81286.1| exodeoxyribonuclease [Streptococcus suis ST3]
gi|353736055|gb|AER17064.1| exodeoxyribonuclease [Streptococcus suis D9]
Length = 275
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 109/165 (66%), Gaps = 4/165 (2%)
Query: 16 DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVILTGD 75
DSEGR++T EFD F++ Y PN+GDGL+RL+ R WD + Y+ +L+ KPV+ TGD
Sbjct: 109 DSEGRIITLEFDDFYVTQVYTPNAGDGLKRLADRQI-WDVQYADYLAKLDSHKPVLATGD 167
Query: 76 LNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVV-GYTYWGYR 134
N AH+EID+ NPA NR+S GFTDEERQ F N L+KGF DTFR H V+ YT+W R
Sbjct: 168 YNVAHKEIDLANPASNRQSPGFTDEERQGF-TNLLAKGFTDTFRHLHGDVLNAYTWWAQR 226
Query: 135 HGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
K N GWR+DY+LVS +ADK S ++ DH+PI +
Sbjct: 227 SRTSKINNTGWRIDYWLVSDRIADKVSKSDMIDSGARQDHTPIVM 271
>gi|365904744|ref|ZP_09442503.1| Exodeoxyribonuclease III [Lactobacillus versmoldensis KCTC 3814]
Length = 253
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL++ GL + + EGR +T E+ F+L++ Y PNS L+RL +R+ ++ ++ ++
Sbjct: 72 EPLNIETGLDDDEFNHEGRTITLEYPDFYLINSYTPNSQPKLKRLDFRMG-YNDAMWKHM 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+ L KKKPVIL GDLN AH EIDI N N ++ GF+DEER F + L GF DTFR
Sbjct: 131 QTLSKKKPVILCGDLNVAHNEIDIKNDKTNHKNPGFSDEERNKF-SELLDSGFTDTFRYL 189
Query: 122 HRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
H V Y++W YR RK N GWR+DYF++S + D ++ IL DV GSDH PI L L
Sbjct: 190 HPEEVKYSWWSYRFNARKNNAGWRIDYFVISNNGQDLIQNADILNDVYGSDHCPIQLDLN 249
Query: 182 L 182
+
Sbjct: 250 I 250
>gi|417941368|ref|ZP_12584655.1| exodeoxyribonuclease III [Streptococcus oralis SK313]
gi|343388661|gb|EGV01247.1| exodeoxyribonuclease III [Streptococcus oralis SK313]
Length = 275
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ +L+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQV-WDIKYAEYLAQLDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+ GF DTFR H + YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDITERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMINSGARQDHTPIVMEIEL 275
>gi|169829765|ref|YP_001699923.1| exodeoxyribonuclease [Lysinibacillus sphaericus C3-41]
gi|168994253|gb|ACA41793.1| Exodeoxyribonuclease [Lysinibacillus sphaericus C3-41]
Length = 251
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PLSV YG+G D EGR++T E++ F+L++ Y PN+ L RL R+T W+ L+SY++
Sbjct: 73 PLSVKYGVGDEDSQDEGRIITLEYEDFYLVNVYTPNAQRDLARLPLRLT-WEEHLASYLQ 131
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
+L KKPV+ GDLN AH EID+ N N ++GFT EER F + L+ GFVD+FR +H
Sbjct: 132 DLNSKKPVVYCGDLNVAHTEIDLKNAKSNIGNSGFTYEERAKF-SELLASGFVDSFRYKH 190
Query: 123 RGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+T+W Y + R+ N GWR+DYF+VS+ L ++ + + I P + GSDH PI L L
Sbjct: 191 PNETDHFTWWSYMNKVRERNIGWRIDYFIVSEQLKNQINQATIHPHIMGSDHCPIELQLH 250
Query: 182 L 182
+
Sbjct: 251 V 251
>gi|255024226|ref|ZP_05296212.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes FSL J1-208]
Length = 216
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 107/148 (72%), Gaps = 3/148 (2%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
++PLSV YGLG+ +HD+EGR++T EF+ FF+++ Y PNS L+RL YR+T ++ ++ Y
Sbjct: 71 VEPLSVQYGLGVPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYRMT-FEDAILEY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
VK L+K KPV+L GDLN AH+EID+ NP NR++AGF+DEER F A FL GF+D+FR
Sbjct: 130 VKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSA-FLDAGFIDSFRY 188
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLD 147
+ + Y++W YR R N GWR+D
Sbjct: 189 FYPDLTDAYSWWSYRMNARARNTGWRID 216
>gi|289167379|ref|YP_003445648.1| exodeoxyribonuclease III [Streptococcus mitis B6]
gi|288906946|emb|CBJ21780.1| exodeoxyribonuclease III [Streptococcus mitis B6]
Length = 275
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDEFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVMEIEL 275
>gi|418976471|ref|ZP_13524342.1| exodeoxyribonuclease III [Streptococcus mitis SK575]
gi|383351433|gb|EID29232.1| exodeoxyribonuclease III [Streptococcus mitis SK575]
Length = 275
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDEFFVTQVYTPNAGDGLKRLEERQI-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVMEIEL 275
>gi|422851129|ref|ZP_16897799.1| exodeoxyribonuclease [Streptococcus sanguinis SK150]
gi|325694998|gb|EGD36902.1| exodeoxyribonuclease [Streptococcus sanguinis SK150]
Length = 275
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 109/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ L+K+KPV+
Sbjct: 106 STMDVEGRIITLEFDGFFVTQVYTPNAGDGLKRLDDRQV-WDAKYAEYLGTLDKQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+KGF DTFR H + YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLAKGFTDTFRHLHGDIPNQYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVMEIEL 275
>gi|320547311|ref|ZP_08041602.1| exodeoxyribonuclease [Streptococcus equinus ATCC 9812]
gi|320448009|gb|EFW88761.1| exodeoxyribonuclease [Streptococcus equinus ATCC 9812]
Length = 275
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 109/169 (64%), Gaps = 4/169 (2%)
Query: 16 DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVILTGD 75
D EGR++T EFD+F++ Y PN+GDGL+RL+ R WD + Y+ EL++ KPV+ TGD
Sbjct: 109 DYEGRIITLEFDNFYVTQVYTPNAGDGLKRLTERQI-WDEKYADYLAELDQTKPVLATGD 167
Query: 76 LNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYWGYR 134
N AH EID+ NP NRRSAGFTDEER F N L+KGF DTFR H + Y++W R
Sbjct: 168 YNVAHNEIDLANPNSNRRSAGFTDEERAGF-TNLLAKGFTDTFRYLHGDIPNVYSWWAQR 226
Query: 135 HGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
K N GWR+DY+L S +ADK S ++ T DH+PI L + L
Sbjct: 227 SKTSKINNTGWRIDYWLASNRIADKITKSEMIDSGTRQDHTPIVLEIDL 275
>gi|418203066|ref|ZP_12839493.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA52306]
gi|419456198|ref|ZP_13996154.1| exodeoxyribonuclease III [Streptococcus pneumoniae EU-NP04]
gi|421286144|ref|ZP_15736919.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA60190]
gi|353866557|gb|EHE46457.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA52306]
gi|379627638|gb|EHZ92249.1| exodeoxyribonuclease III [Streptococcus pneumoniae EU-NP04]
gi|395885452|gb|EJG96476.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA60190]
Length = 275
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ +L+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQV-WDAKYAEYLAKLDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHVHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIDL 275
>gi|340354875|ref|ZP_08677571.1| exodeoxyribonuclease III [Sporosarcina newyorkensis 2681]
gi|339622889|gb|EGQ27400.1| exodeoxyribonuclease III [Sporosarcina newyorkensis 2681]
Length = 238
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 110/176 (62%), Gaps = 3/176 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV YGL D ++EGR++T EF+ FFL++CY PNS L RLSYR+ +W+ + +++
Sbjct: 58 RPLSVQYGLNGQDSEAEGRVLTLEFEKFFLVNCYTPNSQRDLARLSYRL-KWEDEMLAHL 116
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
EL+ +KPVI GDLN AH+EIDI N N ++GFT EER L GF+DTFR
Sbjct: 117 TELDAQKPVIYCGDLNVAHEEIDICNVKSNYGNSGFTKEERAKM-TRLLDSGFIDTFRYL 175
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPI 176
H G YT+W Y R N GWR+DY L+S L S I ++ GSDH PI
Sbjct: 176 HPNQEGAYTWWSYMRDVRARNIGWRIDYLLISNRLQSTLQTSEIHAEILGSDHCPI 231
>gi|333905554|ref|YP_004479425.1| 3'-exo-deoxyribonuclease [Streptococcus parauberis KCTC 11537]
gi|333120819|gb|AEF25753.1| putative 3'-exo-deoxyribonuclease [Streptococcus parauberis KCTC
11537]
gi|456370383|gb|EMF49279.1| Exodeoxyribonuclease III [Streptococcus parauberis KRS-02109]
gi|457096021|gb|EMG26492.1| Exodeoxyribonuclease III [Streptococcus parauberis KRS-02083]
Length = 275
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 108/169 (63%), Gaps = 4/169 (2%)
Query: 16 DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVILTGD 75
D+EGR++T EF+ F++ Y PN+GDGL+RL R WD + Y+ EL+K KPV+ TGD
Sbjct: 109 DAEGRIITLEFEDFYVTQVYTPNAGDGLKRLEDR-QAWDIQYADYLAELDKTKPVLATGD 167
Query: 76 LNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYWGYR 134
N AH EID+ NPA NRRSAGFTDEER F N L+KGF DTFR H + YT+W R
Sbjct: 168 YNVAHHEIDLANPASNRRSAGFTDEERLGF-TNLLAKGFTDTFRHLHGDIPNVYTWWAQR 226
Query: 135 HGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 227 SKTSKINNTGWRIDYWLTSNRVADKVTKSEMINSGARQDHTPILLEIDL 275
>gi|418974152|ref|ZP_13522077.1| exodeoxyribonuclease III [Streptococcus pseudopneumoniae ATCC
BAA-960]
gi|383345717|gb|EID23817.1| exodeoxyribonuclease III [Streptococcus pseudopneumoniae ATCC
BAA-960]
Length = 275
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDKFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHVHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S ++DK S ++ DH+PI L ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRISDKVTKSDMIDSGARQDHTPIVLEIEL 275
>gi|149024967|ref|ZP_01836347.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP23-BS72]
gi|168494239|ref|ZP_02718382.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC3059-06]
gi|418074690|ref|ZP_12711939.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA11184]
gi|418079286|ref|ZP_12716508.1| exodeoxyribonuclease III [Streptococcus pneumoniae 4027-06]
gi|418081482|ref|ZP_12718692.1| exodeoxyribonuclease III [Streptococcus pneumoniae 6735-05]
gi|418087525|ref|ZP_12724694.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47033]
gi|418090212|ref|ZP_12727365.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA43265]
gi|418099179|ref|ZP_12736275.1| exodeoxyribonuclease III [Streptococcus pneumoniae 6901-05]
gi|418103527|ref|ZP_12740599.1| exodeoxyribonuclease III [Streptococcus pneumoniae NP070]
gi|418117530|ref|ZP_12754499.1| exodeoxyribonuclease III [Streptococcus pneumoniae 6963-05]
gi|418135554|ref|ZP_12772408.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA11426]
gi|418147094|ref|ZP_12783870.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA13637]
gi|418169936|ref|ZP_12806577.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA19077]
gi|418174258|ref|ZP_12810869.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA41277]
gi|418217301|ref|ZP_12843980.1| exodeoxyribonuclease III [Streptococcus pneumoniae
Netherlands15B-37]
gi|419441041|ref|ZP_13981084.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA40410]
gi|419465070|ref|ZP_14004961.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA04175]
gi|419469653|ref|ZP_14009520.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA06083]
gi|419476169|ref|ZP_14016005.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA14688]
gi|419487313|ref|ZP_14027075.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA44128]
gi|419535329|ref|ZP_14074828.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17457]
gi|421241290|ref|ZP_15697835.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2080913]
gi|421273497|ref|ZP_15724337.1| exodeoxyribonuclease III [Streptococcus pneumoniae SPAR55]
gi|421281842|ref|ZP_15732638.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA04672]
gi|147929460|gb|EDK80455.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP23-BS72]
gi|183575787|gb|EDT96315.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC3059-06]
gi|353746221|gb|EHD26883.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA11184]
gi|353746813|gb|EHD27473.1| exodeoxyribonuclease III [Streptococcus pneumoniae 4027-06]
gi|353752221|gb|EHD32852.1| exodeoxyribonuclease III [Streptococcus pneumoniae 6735-05]
gi|353758541|gb|EHD39133.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA47033]
gi|353760985|gb|EHD41560.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA43265]
gi|353768185|gb|EHD48710.1| exodeoxyribonuclease III [Streptococcus pneumoniae 6901-05]
gi|353774828|gb|EHD55315.1| exodeoxyribonuclease III [Streptococcus pneumoniae NP070]
gi|353788211|gb|EHD68609.1| exodeoxyribonuclease III [Streptococcus pneumoniae 6963-05]
gi|353811651|gb|EHD91891.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA13637]
gi|353833915|gb|EHE14023.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA19077]
gi|353837463|gb|EHE17547.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA41277]
gi|353870091|gb|EHE49967.1| exodeoxyribonuclease III [Streptococcus pneumoniae
Netherlands15B-37]
gi|353900887|gb|EHE76437.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA11426]
gi|379536670|gb|EHZ01856.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA04175]
gi|379543907|gb|EHZ09055.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA06083]
gi|379558951|gb|EHZ23983.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA14688]
gi|379563490|gb|EHZ28494.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17457]
gi|379577278|gb|EHZ42200.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA40410]
gi|379585682|gb|EHZ50538.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA44128]
gi|395607668|gb|EJG67765.1| exodeoxyribonuclease III [Streptococcus pneumoniae 2080913]
gi|395873928|gb|EJG85018.1| exodeoxyribonuclease III [Streptococcus pneumoniae SPAR55]
gi|395880009|gb|EJG91064.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA04672]
Length = 275
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ +L+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQV-WDAKYAEYLAKLDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHVHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIDL 275
>gi|55821526|ref|YP_139968.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus LMG 18311]
gi|55737511|gb|AAV61153.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus LMG 18311]
Length = 275
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 111/172 (64%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+ +KPV+
Sbjct: 106 STMDCEGRIITLEFDTFFVTQVYTPNAGDGLKRLLERQI-WDKKYADYLAELDAQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NP+ NRRS GFTDEER F N L+KGF+DT+R + V G YT+W
Sbjct: 165 TGDYNVAHKEIDLANPSSNRRSPGFTDEERAGF-TNLLNKGFIDTYRHLNGDVTGAYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVIKSNMIDSGDRQDHTPIVLEIDL 275
>gi|452820422|gb|EME27464.1| exodeoxyribonuclease III [Galdieria sulphuraria]
Length = 307
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 112/172 (65%), Gaps = 3/172 (1%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S+H+ GRL+ AE+++F++ S YVPNSGD L+ L YR+ WDPS SY+ EL+ KKP++L
Sbjct: 136 SEHNKTGRLIVAEYENFYVASVYVPNSGDKLKNLEYRVHSWDPSFCSYICELQMKKPIVL 195
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFR--AQHRGVVGYTY 130
GDLN AHQ+ID+Y P AGF ER +F VD+FR HR Y++
Sbjct: 196 LGDLNVAHQDIDVYAPERLGSKAGFVQSERNNFSKFLEETKMVDSFRYLYPHRK-EAYSF 254
Query: 131 WGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
W Y+ GGR N+GWR+DY L+S SL D++IL + GSDH PIG+ +++
Sbjct: 255 WDYKTGGRLRNQGWRIDYCLLSSSLVSNLVDAFILDKIEGSDHCPIGIQMRI 306
>gi|262283107|ref|ZP_06060874.1| exodeoxyribonuclease III [Streptococcus sp. 2_1_36FAA]
gi|262261359|gb|EEY80058.1| exodeoxyribonuclease III [Streptococcus sp. 2_1_36FAA]
Length = 275
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 109/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ L+++KPV+
Sbjct: 106 STMDVEGRIITLEFDDFFVTQVYTPNAGDGLKRLDDRQV-WDAKYAEYLATLDQQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+KGF DTFR H + YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLAKGFTDTFRHLHGDIPNQYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVMEIEL 275
>gi|157150318|ref|YP_001450810.1| exodeoxyribonuclease III [Streptococcus gordonii str. Challis
substr. CH1]
gi|157075112|gb|ABV09795.1| exodeoxyribonuclease III [Streptococcus gordonii str. Challis
substr. CH1]
Length = 275
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 109/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ L+++KPV+
Sbjct: 106 STMDVEGRIITLEFDDFFVTQVYTPNAGDGLKRLEDRQV-WDAKYAEYLATLDEQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+KGF DTFR H + YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERTGF-TNLLAKGFTDTFRYLHGDIPNQYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVMEIEL 275
>gi|116628238|ref|YP_820857.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus LMD-9]
gi|386087152|ref|YP_006003026.1| Exonuclease III [Streptococcus thermophilus ND03]
gi|387910253|ref|YP_006340559.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus MN-ZLW-002]
gi|116101515|gb|ABJ66661.1| Exonuclease III [Streptococcus thermophilus LMD-9]
gi|312278865|gb|ADQ63522.1| Exonuclease III [Streptococcus thermophilus ND03]
gi|387575188|gb|AFJ83894.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus MN-ZLW-002]
Length = 275
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 111/172 (64%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+ +KPV+
Sbjct: 106 STMDCEGRIITLEFDTFFVTQVYTPNAGDGLKRLLERQI-WDEKYADYLAELDAQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NP+ NRRS GFTDEER F N L+KGF+DT+R + V G YT+W
Sbjct: 165 TGDYNVAHKEIDLANPSSNRRSPGFTDEERAGF-TNLLNKGFIDTYRHLNGDVTGAYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVIKSNMIDSGDRQDHTPIVLEIDL 275
>gi|312381587|gb|EFR27301.1| hypothetical protein AND_06082 [Anopheles darlingi]
Length = 517
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 115/176 (65%), Gaps = 4/176 (2%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
P+ V+YGLG + D +GRL+TAE++ F+L+ YVPN+G+ L L R+ WD Y++
Sbjct: 98 PIHVSYGLGDEEQDQDGRLLTAEYEKFYLVCVYVPNAGNKLVTLPKRM-RWDEKFHQYLR 156
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
EL+ KKPVIL GD+N AH+EID+ NP N+++AGFT EER + LS GFVDTFR +
Sbjct: 157 ELDSKKPVILCGDMNVAHEEIDLANPKTNKKNAGFTQEERDGL-SKLLSFGFVDTFRQLY 215
Query: 123 RG-VVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIG 177
Y++W Y G R N GWRLDYF+VSQ DK D+ ++ + + S +P G
Sbjct: 216 PDRKAAYSFWTYMGGARAKNVGWRLDYFIVSQRFTDKVTDN-VMAEHSASPTAPHG 270
>gi|325182155|emb|CCA16608.1| exodeoxyribonuclease putative [Albugo laibachii Nc14]
Length = 375
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 115/186 (61%), Gaps = 5/186 (2%)
Query: 1 IKPLSVTYGLGISDHDS-EGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSS 59
++PL V L S S EGR + EF+ F+L+ YVPN+G L RL R T+WD L
Sbjct: 191 LEPLQVRSHLDDSTLGSTEGRFLALEFEKFWLVHTYVPNAGMKLERLGDRTTQWDAVLLQ 250
Query: 60 YVKELEKK--KPVILTGDLNCAHQEIDIYNPAGNR-RSAGFTDEERQSFGANFLSKGFVD 116
++ LEK+ K VI GDLN AHQ+IDI++P NR +S GFTD ER +FG L GFVD
Sbjct: 251 TLQSLEKESEKGVIWCGDLNVAHQDIDIHDPKNNRNKSPGFTDAERNNFGET-LKTGFVD 309
Query: 117 TFRAQHRGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPI 176
TFR H +TYW YR R N+GWRLDYF+VS+ L + S++ V GSDH P+
Sbjct: 310 TFRHFHPEKQQFTYWSYRFNARTRNKGWRLDYFVVSERLMAQVKASFVREGVKGSDHVPV 369
Query: 177 GLILKL 182
G IL L
Sbjct: 370 GAILSL 375
>gi|422823073|ref|ZP_16871261.1| exodeoxyribonuclease [Streptococcus sanguinis SK405]
gi|422826846|ref|ZP_16875025.1| exodeoxyribonuclease [Streptococcus sanguinis SK678]
gi|422855017|ref|ZP_16901675.1| exodeoxyribonuclease [Streptococcus sanguinis SK1]
gi|324993723|gb|EGC25642.1| exodeoxyribonuclease [Streptococcus sanguinis SK405]
gi|324994964|gb|EGC26877.1| exodeoxyribonuclease [Streptococcus sanguinis SK678]
gi|327462994|gb|EGF09315.1| exodeoxyribonuclease [Streptococcus sanguinis SK1]
Length = 275
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 109/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ L+++KPV+
Sbjct: 106 STMDVEGRIITLEFDGFFVTQVYTPNAGDGLKRLDDRQV-WDAKYAEYLATLDQQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+KGF DTFR H + YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLAKGFTDTFRHLHGDIPNQYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVMEIEL 275
>gi|300767631|ref|ZP_07077541.1| exodeoxyribonuclease III [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|300494616|gb|EFK29774.1| exodeoxyribonuclease III [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
Length = 265
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 115/182 (63%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYG+G+ + D EGR++T E+ +++L+CY PNSG L+RL YR +W+ + +Y+
Sbjct: 83 EPLNVTYGIGVPEFDDEGRVITLEYADYYVLTCYTPNSGGELKRLDYR-QQWEDAFLTYI 141
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L KP+I GDLN AH+ ID+ N N SAGFTDEER F L+ G+ DTFR
Sbjct: 142 NSLSANKPLIFCGDLNVAHENIDLKNWRSNHHSAGFTDEERTKFD-RLLAAGYTDTFRHF 200
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W YR R N GWR+DYF+ SQ L + ++ I ++ GSDH P+ L +
Sbjct: 201 YPDQTDIYSWWSYRGHARDNNSGWRIDYFITSQQLDSQLLNARIHNEIFGSDHCPVELDI 260
Query: 181 KL 182
L
Sbjct: 261 IL 262
>gi|374631714|ref|ZP_09704088.1| exodeoxyribonuclease III [Metallosphaera yellowstonensis MK1]
gi|373525544|gb|EHP70324.1| exodeoxyribonuclease III [Metallosphaera yellowstonensis MK1]
Length = 245
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 117/179 (65%), Gaps = 4/179 (2%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PLS YG+G + DSEGR++T EF F++++ Y PNSG+GLRRL ++++ +D + +V
Sbjct: 71 PLSFRYGIGREEFDSEGRVITLEFPDFYVVNAYFPNSGEGLRRLQFKLS-FDEAFQEFVG 129
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
L +KP+++ GD N AH+EIDI P N AGFT EER+ F FL GFVDTFR
Sbjct: 130 SL--RKPLVVCGDFNVAHEEIDIARPEENEDHAGFTREEREWF-HKFLLSGFVDTFRMFV 186
Query: 123 RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
+ Y++W YR R+ N GWR+DY LVS LA + + IL D+ GSDH+PI L L+
Sbjct: 187 KEGGHYSWWSYRTKARERNVGWRIDYCLVSAELAGRVRRANILEDMMGSDHAPITLQLE 245
>gi|295107237|emb|CBL04780.1| exodeoxyribonuclease III [Gordonibacter pamelaeae 7-10-1-b]
Length = 285
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 120/216 (55%), Gaps = 37/216 (17%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL V +GLG D+EGR+V EF F+ + Y PN+ + L R+++R+ EWD + +
Sbjct: 72 QPLQVLHGLGSDYLDAEGRIVALEFPQFWFVDVYTPNAQNELARIAHRM-EWDDAFRDFC 130
Query: 62 KELEK----------------------------------KKPVILTGDLNCAHQEIDIYN 87
K LE+ KPV++ GD N AHQEID+ N
Sbjct: 131 KGLEEGVLPADVPVQRPAPGEGHVCISELPLTQPGETAAPKPVVMCGDFNVAHQEIDLKN 190
Query: 88 PAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYWGYRHGGRKTNRGWRL 146
P NR AGF+DEER F + L GFVDTFR H V G Y++W YR R+ N GWR+
Sbjct: 191 PGPNRGKAGFSDEERGKF-TDLLEAGFVDTFRRLHPDVTGAYSWWSYRFKARQNNAGWRI 249
Query: 147 DYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
DYFLVS+SLA K + I +V GSDH P+GL L+L
Sbjct: 250 DYFLVSESLAPKVASACIYDEVYGSDHCPVGLELEL 285
>gi|322386046|ref|ZP_08059685.1| exodeoxyribonuclease [Streptococcus cristatus ATCC 51100]
gi|417922375|ref|ZP_12565863.1| exodeoxyribonuclease III [Streptococcus cristatus ATCC 51100]
gi|321269890|gb|EFX52811.1| exodeoxyribonuclease [Streptococcus cristatus ATCC 51100]
gi|342832472|gb|EGU66767.1| exodeoxyribonuclease III [Streptococcus cristatus ATCC 51100]
Length = 275
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 109/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ L+++KPV+
Sbjct: 106 STMDVEGRIITLEFDDFFVTQVYTPNAGDGLKRLDERQV-WDVKYAEYLASLDEQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+KGF DTFR H + YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLAKGFTDTFRHLHGDIPNQYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVMEIEL 275
>gi|251781878|ref|YP_002996180.1| 3'-exo-deoxyribonuclease [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|386316404|ref|YP_006012568.1| exodeoxyribonuclease III [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|242390507|dbj|BAH80966.1| putative 3'-exo-deoxyribonuclease [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|323126691|gb|ADX23988.1| exodeoxyribonuclease III [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 275
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 109/169 (64%), Gaps = 4/169 (2%)
Query: 16 DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVILTGD 75
D+EGR++T EF++FF+ Y PN+GDGLRRL R WD + Y+ EL+ +KPV+ TGD
Sbjct: 109 DAEGRMITLEFENFFVTQVYTPNAGDGLRRLEDRQI-WDQKYADYLVELDAQKPVLATGD 167
Query: 76 LNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYWGYR 134
N AH+EID+ NP NRRS GFTDEERQ F N L++GF DTFR H + YT+W R
Sbjct: 168 YNVAHKEIDLANPGSNRRSPGFTDEERQGF-TNLLARGFTDTFRHLHGDIPNVYTWWAQR 226
Query: 135 HGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
K N GWR+DY+L S L DK + S ++ DH+PI L + L
Sbjct: 227 SKTSKINNTGWRIDYWLTSNRLVDKINRSEMISSGERQDHTPILLDIDL 275
>gi|422864971|ref|ZP_16911596.1| exodeoxyribonuclease [Streptococcus sanguinis SK1058]
gi|422878263|ref|ZP_16924729.1| exodeoxyribonuclease [Streptococcus sanguinis SK1059]
gi|422928119|ref|ZP_16961061.1| exodeoxyribonuclease [Streptococcus sanguinis ATCC 29667]
gi|422931115|ref|ZP_16964046.1| exodeoxyribonuclease [Streptococcus sanguinis SK340]
gi|327490155|gb|EGF21943.1| exodeoxyribonuclease [Streptococcus sanguinis SK1058]
gi|332367237|gb|EGJ44972.1| exodeoxyribonuclease [Streptococcus sanguinis SK1059]
gi|339617264|gb|EGQ21890.1| exodeoxyribonuclease [Streptococcus sanguinis ATCC 29667]
gi|339620297|gb|EGQ24867.1| exodeoxyribonuclease [Streptococcus sanguinis SK340]
Length = 322
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL+ R WD + Y+ L+++KPV+
Sbjct: 153 STMDVEGRIITLEFDGFFVTQVYTPNAGDGLKRLNERQV-WDAKYAEYLASLDEQKPVLA 211
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+KGF DTFR H + YT+W
Sbjct: 212 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLAKGFTDTFRHLHGDIPNQYTWW 270
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 271 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVMEIEL 322
>gi|146320518|ref|YP_001200229.1| 3'-exo-deoxyribonuclease [Streptococcus suis 98HAH33]
gi|145691324|gb|ABP91829.1| putative 3'-exo-deoxyribonuclease [Streptococcus suis 98HAH33]
Length = 276
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 109/165 (66%), Gaps = 4/165 (2%)
Query: 16 DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVILTGD 75
DSEGR++T EFD F++ Y PN+GDGL+RL+ R WD + Y+ +L+ KPV+ TGD
Sbjct: 110 DSEGRIITLEFDDFYVTQVYTPNAGDGLKRLADRQI-WDVQYADYLAKLDSHKPVLATGD 168
Query: 76 LNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVV-GYTYWGYR 134
N AH+EID+ NPA NR+S GFTDEERQ F N L+KGF DTFR H V+ YT+W R
Sbjct: 169 YNVAHKEIDLANPASNRQSPGFTDEERQGF-TNLLAKGFTDTFRHLHGDVLNAYTWWAQR 227
Query: 135 HGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
K N GWR+DY+LVS +ADK S ++ DH+PI +
Sbjct: 228 SRTSKINNTGWRIDYWLVSDRIADKVSKSDMIDSGARQDHTPIVM 272
>gi|146318325|ref|YP_001198037.1| exonuclease III [Streptococcus suis 05ZYH33]
gi|145689131|gb|ABP89637.1| Exonuclease III [Streptococcus suis 05ZYH33]
Length = 168
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 109/165 (66%), Gaps = 4/165 (2%)
Query: 16 DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVILTGD 75
DSEGR++T EFD F++ Y PN+GDGL+RL+ R WD + Y+ +L+ KPV+ TGD
Sbjct: 2 DSEGRIITLEFDDFYVTQVYTPNAGDGLKRLADRQI-WDVQYADYLAKLDSHKPVLATGD 60
Query: 76 LNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVV-GYTYWGYR 134
N AH+EID+ NPA NR+S GFTDEERQ F N L+KGF DTFR H V+ YT+W R
Sbjct: 61 YNVAHKEIDLANPASNRQSPGFTDEERQGF-TNLLAKGFTDTFRHLHGDVLNAYTWWAQR 119
Query: 135 HGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
K N GWR+DY+LVS +ADK S ++ DH+PI +
Sbjct: 120 SRTSKINNTGWRIDYWLVSDRIADKVSKSDMIDSGARQDHTPIVM 164
>gi|148544535|ref|YP_001271905.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri DSM 20016]
gi|184153898|ref|YP_001842239.1| exodeoxyribonuclease III [Lactobacillus reuteri JCM 1112]
gi|227363037|ref|ZP_03847174.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri MM2-3]
gi|325682856|ref|ZP_08162372.1| exodeoxyribonuclease III [Lactobacillus reuteri MM4-1A]
gi|148531569|gb|ABQ83568.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri DSM 20016]
gi|183225242|dbj|BAG25759.1| exodeoxyribonuclease III [Lactobacillus reuteri JCM 1112]
gi|227071921|gb|EEI10207.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri MM2-3]
gi|324977206|gb|EGC14157.1| exodeoxyribonuclease III [Lactobacillus reuteri MM4-1A]
Length = 253
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/179 (46%), Positives = 113/179 (63%), Gaps = 3/179 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KP +V YG+ S D EGRL+T E+ +F+L+ YVP SG+ L+ L YR+ +WD + YV
Sbjct: 72 KPENVIYGMNNSIFDKEGRLITLEYPNFYLIDVYVPVSGEKLQHLDYRL-DWDRAFLDYV 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L+ KPVI+ GD++ A+Q ID+ P N AGFT +ER FG L+ G DTFR
Sbjct: 131 INLQSSKPVIIGGDMSIAYQPIDLAEPTENHHKAGFTKQERADFG-KLLNAGLTDTFRYL 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
H + G YT+W YR+ R+ N GWRLDYFLVS ++ ++ IL DV GS H PI L+
Sbjct: 190 HPNLHGAYTWWSYRYDARERNVGWRLDYFLVSDVWKERIEEAKILSDVKGSSHCPIELV 248
>gi|323351082|ref|ZP_08086739.1| exodeoxyribonuclease [Streptococcus sanguinis VMC66]
gi|422847206|ref|ZP_16893889.1| exodeoxyribonuclease [Streptococcus sanguinis SK72]
gi|322122806|gb|EFX94515.1| exodeoxyribonuclease [Streptococcus sanguinis VMC66]
gi|325687044|gb|EGD29067.1| exodeoxyribonuclease [Streptococcus sanguinis SK72]
Length = 275
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 109/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ L+++KPV+
Sbjct: 106 STMDVEGRIITLEFDGFFVTQVYTPNAGDGLKRLDDRQV-WDAKYAEYLATLDEQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+KGF DTFR H + YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLAKGFTDTFRHLHGDIPNQYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVMEIEL 275
>gi|422884627|ref|ZP_16931075.1| exodeoxyribonuclease [Streptococcus sanguinis SK49]
gi|332359057|gb|EGJ36878.1| exodeoxyribonuclease [Streptococcus sanguinis SK49]
Length = 275
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 109/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ L+++KPV+
Sbjct: 106 STMDVEGRIITLEFDGFFVTQVYTPNAGDGLKRLDDRQV-WDAKYAEYLATLDEQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+KGF DTFR H + YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLAKGFTDTFRHLHGDIPNQYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVMEIEL 275
>gi|422882779|ref|ZP_16929235.1| exodeoxyribonuclease [Streptococcus sanguinis SK355]
gi|332358812|gb|EGJ36635.1| exodeoxyribonuclease [Streptococcus sanguinis SK355]
Length = 275
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 109/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ L+++KPV+
Sbjct: 106 STMDVEGRIITLEFDGFFVTQVYTPNAGDGLKRLDDRQV-WDAKYAEYLATLDEQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+KGF DTFR H + YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLAKGFTDTFRHLHGDIPNQYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVMEIEL 275
>gi|419706513|ref|ZP_14234033.1| 3'-exo-deoxyribonuclease [Streptococcus salivarius PS4]
gi|383283748|gb|EIC81692.1| 3'-exo-deoxyribonuclease [Streptococcus salivarius PS4]
Length = 275
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+ +KPV+
Sbjct: 106 STMDCEGRIITLEFDKFFVTQVYTPNAGDGLKRLLERQI-WDEKYADYLAELDAQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NP+ NRRS GFTDEER+ F N L+KGF DT+R + V G YT+W
Sbjct: 165 TGDYNVAHKEIDLANPSSNRRSPGFTDEEREGF-TNLLAKGFTDTYRHLNGDVTGAYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGDRQDHTPIVLEIDL 275
>gi|322377529|ref|ZP_08052020.1| exodeoxyribonuclease III [Streptococcus sp. M334]
gi|321281729|gb|EFX58738.1| exodeoxyribonuclease III [Streptococcus sp. M334]
Length = 275
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ +L+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDEFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAQLDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVMEIEL 275
>gi|414157180|ref|ZP_11413480.1| exodeoxyribonuclease [Streptococcus sp. F0442]
gi|410868496|gb|EKS16461.1| exodeoxyribonuclease [Streptococcus sp. F0442]
Length = 275
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 109/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL+ R WD + Y+ L+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDGFFVTQVYTPNAGDGLKRLAERQV-WDVKYAEYLANLDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLAAGFTDTFRHLHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIEL 275
>gi|307707550|ref|ZP_07644032.1| exodeoxyribonuclease III [Streptococcus mitis NCTC 12261]
gi|307616502|gb|EFN95693.1| exodeoxyribonuclease III [Streptococcus mitis NCTC 12261]
Length = 275
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDKFFVTQVYTPNTGDGLKRLEERQI-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
+GD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 SGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIEL 275
>gi|308179822|ref|YP_003923950.1| exodeoxyribonuclease III [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|308045313|gb|ADN97856.1| exodeoxyribonuclease III [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 254
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 115/182 (63%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYG+G+ + D EGR++T E+ +++L+CY PNSG L+RL YR +W+ + +Y+
Sbjct: 72 EPLNVTYGIGVPEFDDEGRVITLEYADYYVLTCYTPNSGGELKRLDYR-QQWEDAFLTYI 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L KP+I GDLN AH+ ID+ N N SAGFTDEER F L+ G+ DTFR
Sbjct: 131 NSLSANKPLIFCGDLNVAHENIDLKNWHSNHHSAGFTDEERTKFD-RLLAAGYTDTFRHF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W YR R N GWR+DYF+ SQ L + ++ I ++ GSDH P+ L +
Sbjct: 190 YPDQTDIYSWWSYRGHARDNNSGWRIDYFITSQQLDSQLLNARIHNEIFGSDHCPVELDI 249
Query: 181 KL 182
L
Sbjct: 250 IL 251
>gi|414158968|ref|ZP_11415260.1| exodeoxyribonuclease [Streptococcus sp. F0441]
gi|410868951|gb|EKS16915.1| exodeoxyribonuclease [Streptococcus sp. F0441]
Length = 275
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ +L+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDGFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAQLDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLETGFTDTFRHLHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVLEIEL 275
>gi|418105971|ref|ZP_12743027.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA44500]
gi|353776147|gb|EHD56626.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA44500]
Length = 275
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ +L+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQV-WDAKYAEYLAKLDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVLEIDL 275
>gi|306824688|ref|ZP_07458032.1| exodeoxyribonuclease III [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|304432899|gb|EFM35871.1| exodeoxyribonuclease III [Streptococcus sp. oral taxon 071 str.
73H25AP]
Length = 275
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ +L+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDTFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAQLDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S ++DK S ++ DH+PI L ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVSDKVTKSDMIDSGARQDHTPIVLEIEL 275
>gi|392428342|ref|YP_006469353.1| exodeoxyribonuclease [Streptococcus intermedius JTH08]
gi|419777556|ref|ZP_14303467.1| exodeoxyribonuclease III [Streptococcus intermedius SK54]
gi|423070793|ref|ZP_17059569.1| exodeoxyribonuclease [Streptococcus intermedius F0413]
gi|424787315|ref|ZP_18214083.1| exodeoxyribonuclease III [Streptococcus intermedius BA1]
gi|355364887|gb|EHG12614.1| exodeoxyribonuclease [Streptococcus intermedius F0413]
gi|383844792|gb|EID82203.1| exodeoxyribonuclease III [Streptococcus intermedius SK54]
gi|391757488|dbj|BAM23105.1| exodeoxyribonuclease homolog [Streptococcus intermedius JTH08]
gi|422114078|gb|EKU17796.1| exodeoxyribonuclease III [Streptococcus intermedius BA1]
Length = 275
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 109/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ L+++KPV+
Sbjct: 106 STMDVEGRIITLEFDGFFVTQVYTPNAGDGLKRLDDRQV-WDAKYAEYLATLDEQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+KGF DTFR H + YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLAKGFTDTFRHLHGDIPNQYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVMEIEL 275
>gi|419817316|ref|ZP_14341481.1| exodeoxyribonuclease III [Streptococcus sp. GMD4S]
gi|404466152|gb|EKA11507.1| exodeoxyribonuclease III [Streptococcus sp. GMD4S]
Length = 275
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 109/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ +L+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDEFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAQLDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPECYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTQSDMIDSGARQDHTPIVMEIEL 275
>gi|386345233|ref|YP_006041397.1| 3-exo-deoxyribonuclease [Streptococcus thermophilus JIM 8232]
gi|339278694|emb|CCC20442.1| 3-exo-deoxyribonuclease [Streptococcus thermophilus JIM 8232]
Length = 275
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+ +KPV+
Sbjct: 106 STMDCEGRIITLEFDTFFVTQVYTPNAGDGLKRLLERQI-WDKKYADYLAELDAQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NP+ NRRS GFTDEER F N L+KGF DT+R + V G YT+W
Sbjct: 165 TGDYNVAHKEIDLANPSSNRRSPGFTDEERAGF-TNLLNKGFTDTYRHLNGDVTGAYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSNMIDSGDRQDHTPIVLEIDL 275
>gi|418018388|ref|ZP_12657944.1| 3'-exo-deoxyribonuclease ExoIII [Streptococcus salivarius M18]
gi|345527237|gb|EGX30548.1| 3'-exo-deoxyribonuclease ExoIII [Streptococcus salivarius M18]
Length = 275
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 109/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+ +KPV+
Sbjct: 106 STMDCEGRIITLEFDKFFVTQVYTPNAGDGLKRLLERQI-WDEKYADYLAELDAQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NP+ NRRS GFTDEER F N LSKGF DT+R + V G YT+W
Sbjct: 165 TGDYNVAHKEIDLANPSSNRRSPGFTDEERAGF-TNLLSKGFTDTYRHLNGDVTGSYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGDRQDHTPIVLEIDL 275
>gi|254555843|ref|YP_003062260.1| exodeoxyribonuclease III [Lactobacillus plantarum JDM1]
gi|380031793|ref|YP_004888784.1| exodeoxyribonuclease III [Lactobacillus plantarum WCFS1]
gi|418274434|ref|ZP_12889932.1| exodeoxyribonuclease III [Lactobacillus plantarum subsp. plantarum
NC8]
gi|448820389|ref|YP_007413551.1| Exodeoxyribonuclease III [Lactobacillus plantarum ZJ316]
gi|254044770|gb|ACT61563.1| exodeoxyribonuclease III [Lactobacillus plantarum JDM1]
gi|342241036|emb|CCC78270.1| exodeoxyribonuclease III [Lactobacillus plantarum WCFS1]
gi|376010000|gb|EHS83326.1| exodeoxyribonuclease III [Lactobacillus plantarum subsp. plantarum
NC8]
gi|448273886|gb|AGE38405.1| Exodeoxyribonuclease III [Lactobacillus plantarum ZJ316]
Length = 254
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 115/182 (63%), Gaps = 3/182 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL+VTYG+G+ + D EGR++T E+ +++L+CY PNSG L+RL YR +W+ + +Y+
Sbjct: 72 EPLNVTYGIGVPEFDDEGRVITLEYADYYVLTCYTPNSGGELKRLDYR-QQWEDAFLTYI 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
L KP+I GDLN AH+ ID+ N N SAGFTDEER F L+ G+ DTFR
Sbjct: 131 NSLSANKPLIFCGDLNVAHENIDLKNWRSNHHSAGFTDEERTKFD-RLLAAGYTDTFRHF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLIL 180
+ Y++W YR R N GWR+DYF+ SQ L + ++ I ++ GSDH P+ L +
Sbjct: 190 YPDQTDIYSWWSYRGHARDNNSGWRIDYFITSQQLDSQLLNARIHNEIFGSDHCPVELDI 249
Query: 181 KL 182
L
Sbjct: 250 IL 251
>gi|417847042|ref|ZP_12493014.1| exodeoxyribonuclease III [Streptococcus mitis SK1073]
gi|339457407|gb|EGP69978.1| exodeoxyribonuclease III [Streptococcus mitis SK1073]
Length = 275
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDEFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +A+K S ++ DH+PI + ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIANKVTKSDMIDSGARQDHTPIVMEIEL 275
>gi|149180849|ref|ZP_01859351.1| exodeoxyribonuclease [Bacillus sp. SG-1]
gi|148851368|gb|EDL65516.1| exodeoxyribonuclease [Bacillus sp. SG-1]
Length = 253
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 114/176 (64%), Gaps = 3/176 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PLSV+YG+G D + EGR +T EF+ F+LL+ Y PNS L RL R+ W+ + +Y+
Sbjct: 72 EPLSVSYGIGEDDDEPEGRCITLEFEDFYLLNVYTPNSKRDLSRLEDRL-HWEERVRAYI 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
KEL++ KPVI GDLN AH EID+ NP N ++GFT EER+ + L++GFVD+FR
Sbjct: 131 KELDEIKPVIYCGDLNVAHNEIDLRNPKSNHGNSGFTTEEREKM-STLLNEGFVDSFRHL 189
Query: 122 H-RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPI 176
+ YT+W Y R+ N GWR+DYF+VS L D D+ + DV GSDH P+
Sbjct: 190 YPEKDQSYTWWSYMSKVRERNIGWRIDYFIVSDRLKDSLKDAGMHTDVLGSDHCPV 245
>gi|445381668|ref|ZP_21427102.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus MTCC 5460]
gi|445394570|ref|ZP_21428836.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus MTCC 5461]
gi|444748857|gb|ELW73805.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus MTCC 5461]
gi|444748961|gb|ELW73903.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus MTCC 5460]
Length = 275
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+ +KPV+
Sbjct: 106 STMDCEGRIITLEFDTFFVTQVYTPNAGDGLKRLLERQI-WDEKYADYLAELDAQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NP+ NRRS GFTDEER F N L+KGF DT+R + V G YT+W
Sbjct: 165 TGDYNVAHKEIDLANPSSNRRSPGFTDEERAGF-TNLLNKGFTDTYRHLNGDVTGAYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSNMIDSGDRQDHTPIVLEIDL 275
>gi|156543084|ref|XP_001605156.1| PREDICTED: recombination repair protein 1-like isoform 1 [Nasonia
vitripennis]
gi|345493726|ref|XP_003427141.1| PREDICTED: recombination repair protein 1-like isoform 2 [Nasonia
vitripennis]
Length = 391
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 116/176 (65%), Gaps = 4/176 (2%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+P+ ++ GL + D EGRL+TAE++ F+L++ YVPN+G+ L L R+ +W+ + ++
Sbjct: 213 EPIDISMGLD-EEFDDEGRLITAEYEHFYLVNVYVPNAGNKLVTLPKRL-KWNEAFKKHI 270
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
++L+KKKPVI+ GD+N AHQEID+ NP N ++AGFT EER +FL GFVDTFR
Sbjct: 271 QDLDKKKPVIICGDMNVAHQEIDLKNPKTNTKNAGFTKEERDGM-TDFLQAGFVDTFRLL 329
Query: 122 HRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPI 176
+ YT+W Y + R N GWRLDY++VS+ + +K D V GSDH P+
Sbjct: 330 YPDKTDAYTFWAYFNNARSKNIGWRLDYYIVSEKIKNKVCDVVNRDQVFGSDHCPV 385
>gi|402828442|ref|ZP_10877330.1| exodeoxyribonuclease III [Slackia sp. CM382]
gi|402286525|gb|EJU34996.1| exodeoxyribonuclease III [Slackia sp. CM382]
Length = 264
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 112/195 (57%), Gaps = 16/195 (8%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
+PL V + +G D+EGR+ EF+ F+ + Y PN+ L RL +R+ WD + +
Sbjct: 72 EPLQVVHHVGTPALDTEGRICACEFEKFWFVDVYTPNAQPELARLEHRMA-WDAAFREFC 130
Query: 62 KELE-------------KKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGAN 108
K LE + KPVI+ GD N AHQEID+ NP NR S GF+DEER SF +
Sbjct: 131 KNLEAGVVPEGLGYASAEPKPVIMCGDFNVAHQEIDLKNPRSNRGSPGFSDEERSSF-TS 189
Query: 109 FLSKGFVDTFRAQHRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPD 167
L GF DTFR H + G Y++W YR RK N GWR+DYFLVS +L + I +
Sbjct: 190 LLDAGFADTFRMLHPDLEGAYSWWSYRFNARKNNAGWRIDYFLVSDALRGAIESASIYDE 249
Query: 168 VTGSDHSPIGLILKL 182
V GSDH P+GL + L
Sbjct: 250 VMGSDHCPVGLDIAL 264
>gi|422848137|ref|ZP_16894813.1| exodeoxyribonuclease [Streptococcus sanguinis SK115]
gi|325690669|gb|EGD32670.1| exodeoxyribonuclease [Streptococcus sanguinis SK115]
Length = 275
Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 109/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ L+++KPV+
Sbjct: 106 STMDVEGRIITLEFDGFFVTQVYTPNAGDGLKRLDDRQV-WDVKYAEYLATLDQQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+KGF DTFR H + YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLAKGFTDTFRHLHGDIPNQYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVMEIEL 275
>gi|374315128|ref|YP_005061556.1| exodeoxyribonuclease III [Sphaerochaeta pleomorpha str. Grapes]
gi|359350772|gb|AEV28546.1| exodeoxyribonuclease III [Sphaerochaeta pleomorpha str. Grapes]
Length = 271
Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 118/182 (64%), Gaps = 4/182 (2%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
I+P+SV+ +G DSEGR VTAEF+ +F++ CY PNS + L R+ R+ +WD + Y
Sbjct: 93 IQPISVSREIG-HPLDSEGRTVTAEFEDYFVICCYTPNSQEKLARIELRM-DWDAAFRKY 150
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
V +L+KKKPV++ GDLN AH ID+ NP N ++AG++ +ERQ F + L+ GF D+FR
Sbjct: 151 VSDLDKKKPVLICGDLNVAHNPIDLKNPKQNEQNAGYSIQERQGF-STLLASGFTDSFRY 209
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ Y++W YR R+ N GWR+DY+L S+ DS I V GSDH+P+ L+
Sbjct: 210 LYPDKTDAYSWWSYRFHAREKNIGWRIDYWLASKRFEQHIKDSIIEDQVLGSDHAPVVLV 269
Query: 180 LK 181
L+
Sbjct: 270 LE 271
>gi|299538266|ref|ZP_07051551.1| exodeoxyribonuclease [Lysinibacillus fusiformis ZC1]
gi|424736313|ref|ZP_18164773.1| exodeoxyribonuclease [Lysinibacillus fusiformis ZB2]
gi|298726468|gb|EFI67058.1| exodeoxyribonuclease [Lysinibacillus fusiformis ZC1]
gi|422949916|gb|EKU44289.1| exodeoxyribonuclease [Lysinibacillus fusiformis ZB2]
Length = 251
Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 115/180 (63%), Gaps = 3/180 (1%)
Query: 3 PLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVK 62
PLSV YG+G D EGR++T E+ +F+L++ Y PN+ L RL R+ +W+ L++Y++
Sbjct: 73 PLSVKYGVGAEDSQDEGRIITLEYKNFYLVNVYTPNAQRDLARLPLRL-QWEDRLANYLQ 131
Query: 63 ELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQH 122
EL +KPV+ GDLN AH EID+ N N ++GFT EER F A L GFVD+FR +H
Sbjct: 132 ELNCQKPVVYCGDLNVAHTEIDLKNAKSNIGNSGFTYEERAKFSA-LLESGFVDSFRYKH 190
Query: 123 -RGVVGYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILK 181
YT+W Y + R+ N GWR+DYF+VS L ++ + I P + GSDH PI L L+
Sbjct: 191 PEETDHYTWWSYMNKVRERNIGWRIDYFVVSNQLKEQIESATIHPHIMGSDHCPIELQLQ 250
>gi|401681190|ref|ZP_10813095.1| exodeoxyribonuclease III [Streptococcus sp. AS14]
gi|400187325|gb|EJO21520.1| exodeoxyribonuclease III [Streptococcus sp. AS14]
Length = 275
Score = 165 bits (417), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 109/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ L+ +KPV+
Sbjct: 106 STMDVEGRIITLEFDNFFVTQVYTPNAGDGLKRLDDRQV-WDAKYAEYLATLDGQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+KGF DTFR H + YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLAKGFTDTFRHLHGDIPNQYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVMEIEL 275
>gi|55823454|ref|YP_141895.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus CNRZ1066]
gi|55739439|gb|AAV63080.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus CNRZ1066]
Length = 275
Score = 165 bits (417), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+ +KPV+
Sbjct: 106 STMDCEGRIITLEFDTFFVTQVYTPNAGDGLKRLLERQI-WDEKYADYLAELDAQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NP+ NRRS GFTDEER F N L+KGF DT+R + V G YT+W
Sbjct: 165 TGDYNVAHKEIDLANPSSNRRSPGFTDEERAGF-TNLLNKGFTDTYRHLNGDVTGAYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVIKSNMIDSGDRQDHTPIVLEIDL 275
>gi|417927917|ref|ZP_12571305.1| exodeoxyribonuclease III [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|340765791|gb|EGR88317.1| exodeoxyribonuclease III [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
Length = 275
Score = 165 bits (417), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 108/169 (63%), Gaps = 4/169 (2%)
Query: 16 DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVILTGD 75
D+EGR++T EF+ FF+ Y PN+GDGLRRL R WD + Y+ EL+ +KPV+ TGD
Sbjct: 109 DAEGRIITLEFEDFFVTQVYTPNAGDGLRRLDDRQI-WDHKYADYLTELDTQKPVLATGD 167
Query: 76 LNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYWGYR 134
N AH+EID+ NP NRRS GFTDEERQ F N L++GF DTFR H + YT+W R
Sbjct: 168 YNVAHKEIDLANPGSNRRSPGFTDEERQGF-TNLLARGFTDTFRHLHGDIPNVYTWWAQR 226
Query: 135 HGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
K N GWR+DY+L S L DK + S ++ DH+PI L + L
Sbjct: 227 SKTSKINNTGWRIDYWLTSNRLVDKINRSEMISSGERQDHTPILLDIDL 275
>gi|421185556|ref|ZP_15642955.1| exonuclease III [Oenococcus oeni AWRIB418]
gi|399968819|gb|EJO03250.1| exonuclease III [Oenococcus oeni AWRIB418]
Length = 273
Score = 165 bits (417), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 82/168 (48%), Positives = 113/168 (67%), Gaps = 3/168 (1%)
Query: 16 DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVILTGD 75
D EGR+VT E+ F+LL+ Y PNSGDGLRRL R +WD Y+ +L ++K VI +GD
Sbjct: 108 DQEGRIVTLEYPDFYLLNVYTPNSGDGLRRLPER-GKWDDQFRHYISDLSERKIVIFSGD 166
Query: 76 LNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVGYTYWGYRH 135
LN AH+EID+ N + N SAGFTD+ER+ F + LS GF+DT+R QH + Y++W R+
Sbjct: 167 LNVAHEEIDLKNSSSNHNSAGFTDQEREKF-SRLLSAGFIDTWRLQHPKEIAYSWWSQRN 225
Query: 136 GGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
KTN GWR+DY++VS S DK + ++ T +DH+PI L +KL
Sbjct: 226 RLAKTNNAGWRIDYYIVSNSAKDKIVKTGMIDTGTRADHAPIYLQMKL 273
>gi|357635898|ref|ZP_09133773.1| exodeoxyribonuclease III [Streptococcus macacae NCTC 11558]
gi|357584352|gb|EHJ51555.1| exodeoxyribonuclease III [Streptococcus macacae NCTC 11558]
Length = 276
Score = 165 bits (417), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 110/169 (65%), Gaps = 4/169 (2%)
Query: 16 DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVILTGD 75
D+EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y++ L+K+KPV+ TGD
Sbjct: 109 DAEGRIITLEFDKFFVTQVYTPNAGDGLKRLDDRQI-WDKKYADYLENLDKQKPVLATGD 167
Query: 76 LNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYWGYR 134
N AH+EID+ +P+ NRRS GFTDEERQ F N L KGF DTFR H + Y++W R
Sbjct: 168 YNVAHKEIDLAHPSSNRRSPGFTDEERQGF-TNLLDKGFTDTFRYIHGDIPEVYSWWAQR 226
Query: 135 HGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
K N GWR+DY+L S LADK S ++ + DH+PI L + L
Sbjct: 227 SKTSKINNSGWRIDYWLTSNRLADKILKSEMIDSGSRQDHTPILLEIDL 275
>gi|322373458|ref|ZP_08047994.1| exodeoxyribonuclease III [Streptococcus sp. C150]
gi|321278500|gb|EFX55569.1| exodeoxyribonuclease III [Streptococcus sp. C150]
Length = 275
Score = 165 bits (417), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+ +KPV+
Sbjct: 106 STMDCEGRIITLEFDNFFVTQVYTPNAGDGLKRLLERQI-WDEKYADYLAELDAQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NP+ NRRS GFTDEER F N L+KGF DT+R + V G YT+W
Sbjct: 165 TGDYNVAHKEIDLANPSSNRRSPGFTDEERTGF-TNLLTKGFTDTYRHLNGDVTGAYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGDRQDHTPIVLEIDL 275
>gi|293365984|ref|ZP_06612686.1| exodeoxyribonuclease [Streptococcus oralis ATCC 35037]
gi|291315527|gb|EFE55978.1| exodeoxyribonuclease [Streptococcus oralis ATCC 35037]
Length = 275
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 109/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EF+ FF+ Y PN+GDGL+RL R WD + Y+ +L+K+KPV+
Sbjct: 106 STMDLEGRIITLEFEEFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAQLDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHLHGDVPECYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVLEIEL 275
>gi|228476989|ref|ZP_04061627.1| exodeoxyribonuclease III [Streptococcus salivarius SK126]
gi|387760772|ref|YP_006067749.1| exodeoxyribonuclease III [Streptococcus salivarius 57.I]
gi|228251008|gb|EEK10179.1| exodeoxyribonuclease III [Streptococcus salivarius SK126]
gi|339291539|gb|AEJ52886.1| exodeoxyribonuclease III [Streptococcus salivarius 57.I]
Length = 275
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+ +KPV+
Sbjct: 106 STMDCEGRIITLEFDNFFVTQVYTPNAGDGLKRLLERQI-WDEKYADYLAELDAQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NP+ NRRS GFTDEER F N L+KGF DT+R + V G YT+W
Sbjct: 165 TGDYNVAHKEIDLANPSSNRRSPGFTDEERAGF-TNLLAKGFTDTYRHLNGDVTGAYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGDRQDHTPIVLEIDL 275
>gi|421452945|ref|ZP_15902301.1| Exodeoxyribonuclease III [Streptococcus salivarius K12]
gi|400181254|gb|EJO15521.1| Exodeoxyribonuclease III [Streptococcus salivarius K12]
Length = 275
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ EL+ +KPV+
Sbjct: 106 STMDCEGRIITLEFDNFFVTQVYTPNAGDGLKRLLERQI-WDEKYADYLAELDAQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NP+ NRRS GFTDEER F N L+KGF DT+R + V G YT+W
Sbjct: 165 TGDYNVAHKEIDLANPSSNRRSPGFTDEERAGF-TNLLAKGFTDTYRHLNGDVTGAYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L + L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGDRQDHTPIVLEIDL 275
>gi|315613690|ref|ZP_07888597.1| exodeoxyribonuclease III [Streptococcus sanguinis ATCC 49296]
gi|315314381|gb|EFU62426.1| exodeoxyribonuclease III [Streptococcus sanguinis ATCC 49296]
Length = 296
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD+FF+ Y PN+GDGL+RL R WD + Y+ +L+K+KPV+
Sbjct: 127 STMDLEGRIITLEFDTFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAQLDKEKPVLA 185
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 186 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPERYTWW 244
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +A+K S ++ DH+PI L ++L
Sbjct: 245 AQRSKTSKINNTGWRIDYWLTSNRVAEKVTKSDMIDSGARQDHTPIVLEIEL 296
>gi|307710716|ref|ZP_07647145.1| exodeoxyribonuclease III [Streptococcus mitis SK321]
gi|307617487|gb|EFN96658.1| exodeoxyribonuclease III [Streptococcus mitis SK321]
Length = 275
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 107/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ EL+K+KPV+
Sbjct: 106 STMDLEGRIITLEFDKFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAELDKEKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +AD S ++ DH+PI + ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRIADNVTKSDMIDSGARQDHTPIVMEIEL 275
>gi|408401144|ref|YP_006859107.1| putative 3'-exo-deoxyribonuclease [Streptococcus dysgalactiae
subsp. equisimilis RE378]
gi|407967372|dbj|BAM60610.1| putative 3'-exo-deoxyribonuclease [Streptococcus dysgalactiae
subsp. equisimilis RE378]
Length = 275
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 108/169 (63%), Gaps = 4/169 (2%)
Query: 16 DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVILTGD 75
D+EGR++T EF+ FF+ Y PN+GDGLRRL R WD + Y+ EL+ +KPV+ TGD
Sbjct: 109 DAEGRIITLEFEDFFVTQVYTPNAGDGLRRLDDRQI-WDHKYADYLTELDTQKPVLATGD 167
Query: 76 LNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYWGYR 134
N AH+EID+ NP NRRS GFTDEERQ F N L++GF DTFR H + YT+W R
Sbjct: 168 YNVAHKEIDLANPGSNRRSPGFTDEERQGF-TNLLARGFTDTFRHLHGDIPNVYTWWAQR 226
Query: 135 HGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
K N GWR+DY+L S L DK + S ++ DH+PI L + L
Sbjct: 227 SKTSKINNTGWRIDYWLTSNRLVDKINRSEMISSGERQDHTPILLDIDL 275
>gi|418126485|ref|ZP_12763390.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA44511]
gi|353795549|gb|EHD75897.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA44511]
Length = 275
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 107/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ +L+K KPV+
Sbjct: 106 STMDLEGRIITLEFDEFFVTQVYTPNAGDGLKRLEERQV-WDVKYAEYLAQLDKVKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH EID+ NPA NRRS GFTDEER F N L+ GF DTFR H V YT+W
Sbjct: 165 TGDYNVAHNEIDLANPASNRRSPGFTDEERAGF-TNLLATGFTDTFRHIHGDVPERYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI L ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVLEIEL 275
>gi|422820757|ref|ZP_16868950.1| exodeoxyribonuclease [Streptococcus sanguinis SK353]
gi|324991375|gb|EGC23308.1| exodeoxyribonuclease [Streptococcus sanguinis SK353]
Length = 275
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ L+ +KPV+
Sbjct: 106 STMDVEGRIITLEFDDFFVTQVYTPNAGDGLKRLDDRQV-WDAKYAEYLARLDGQKPVLA 164
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+KGF DTFR H + YT+W
Sbjct: 165 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLAKGFTDTFRHLHGDIPNKYTWW 223
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 224 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVMEIEL 275
>gi|357238481|ref|ZP_09125818.1| exodeoxyribonuclease III [Streptococcus ictaluri 707-05]
gi|356753204|gb|EHI70325.1| exodeoxyribonuclease III [Streptococcus ictaluri 707-05]
Length = 275
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 109/169 (64%), Gaps = 4/169 (2%)
Query: 16 DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVILTGD 75
D+EGR++T EFD FF+ Y PN+GD LRRL R WD + Y+ +L+ +KPV+ TGD
Sbjct: 109 DAEGRIITLEFDDFFVTQVYTPNAGDALRRLDDRQI-WDQKYADYLAQLDAQKPVLATGD 167
Query: 76 LNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYWGYR 134
N AH+EID+ NPA NRRSAGFTDEERQ F N L++GF DTFR H V YT+W R
Sbjct: 168 YNVAHKEIDLANPASNRRSAGFTDEERQGF-TNLLNRGFTDTFRFMHGHVPNVYTWWAQR 226
Query: 135 HGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
K N GWR+DY+L S+ L ++ S ++ DH+PI L + L
Sbjct: 227 SKTSKINNTGWRIDYWLTSKRLDERILKSEMISSGERQDHTPILLEIDL 275
>gi|422854785|ref|ZP_16901449.1| exodeoxyribonuclease [Streptococcus sanguinis SK160]
gi|422875883|ref|ZP_16922353.1| exodeoxyribonuclease [Streptococcus sanguinis SK1056]
gi|325696280|gb|EGD38171.1| exodeoxyribonuclease [Streptococcus sanguinis SK160]
gi|332362319|gb|EGJ40119.1| exodeoxyribonuclease [Streptococcus sanguinis SK1056]
Length = 322
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 109/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ L+++KPV+
Sbjct: 153 STMDVEGRIITLEFDGFFVTQVYTPNAGDGLKRLDDRQV-WDAKYAEYLATLDEQKPVLA 211
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+KGF DTFR H + YT+W
Sbjct: 212 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLAKGFTDTFRHLHGDIPNQYTWW 270
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 271 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVMEIEL 322
>gi|19745558|ref|NP_606694.1| 3'-exo-deoxyribonuclease [Streptococcus pyogenes MGAS8232]
gi|19747679|gb|AAL97193.1| putative 3'-exo-deoxyribonuclease [Streptococcus pyogenes MGAS8232]
Length = 275
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/185 (47%), Positives = 115/185 (62%), Gaps = 5/185 (2%)
Query: 1 IKPLSVTYGLGI-SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSS 59
+ P+S +G + D+EGR++T EF+ FF+ Y PN+GDGLRRL R WD +
Sbjct: 93 LNPVSTFPEIGAPTTMDAEGRIITLEFEDFFVTQVYTPNAGDGLRRLDDRQI-WDHKYAD 151
Query: 60 YVKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFR 119
Y+ EL+ +KPV+ GD N AH+EID+ NP+ NRRS GFTDEERQSF N L++GF DTFR
Sbjct: 152 YLTELDAQKPVLAAGDYNVAHKEIDLANPSSNRRSPGFTDEERQSF-TNLLARGFTDTFR 210
Query: 120 AQHRGVVG-YTYWGYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIG 177
H + YT+W R K N GWR+DY+L S L DK S ++ DH+PI
Sbjct: 211 HLHGDIPHVYTWWAQRSKTSKINNTGWRIDYWLASNRLVDKVKRSEMISSGERQDHTPIL 270
Query: 178 LILKL 182
L + L
Sbjct: 271 LDIDL 275
>gi|410494191|ref|YP_006904037.1| exodeoxyribonuclease III [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|417753299|ref|ZP_12401431.1| exodeoxyribonuclease III [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|333770440|gb|EGL47475.1| exodeoxyribonuclease III [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|410439351|emb|CCI61979.1| exodeoxyribonuclease III [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 275
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 108/169 (63%), Gaps = 4/169 (2%)
Query: 16 DSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVILTGD 75
D+EGR++T EF+ FF+ Y PN+GDGLRRL R WD + Y+ EL+ +KPV+ TGD
Sbjct: 109 DAEGRMITLEFEDFFVTQVYTPNAGDGLRRLEDRQI-WDQKYADYLVELDAQKPVLATGD 167
Query: 76 LNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYWGYR 134
N AH+EID+ NP NRRS GFTDEERQ F N L++GF DTFR H + YT+W R
Sbjct: 168 YNVAHKEIDLANPGSNRRSPGFTDEERQGF-TNLLARGFTDTFRHLHGDIPHVYTWWAQR 226
Query: 135 HGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
K N GWR+DY+L S L DK + S ++ DH+PI L + L
Sbjct: 227 SKTSKINNTGWRIDYWLTSNRLVDKINRSEMISSGERQDHTPILLDIDL 275
>gi|125718506|ref|YP_001035639.1| exodeoxyribonuclease [Streptococcus sanguinis SK36]
gi|125498423|gb|ABN45089.1| Exodeoxyribonuclease, putative [Streptococcus sanguinis SK36]
Length = 322
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 109/172 (63%), Gaps = 4/172 (2%)
Query: 13 SDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYVKELEKKKPVIL 72
S D EGR++T EFD FF+ Y PN+GDGL+RL R WD + Y+ L+++KPV+
Sbjct: 153 STMDVEGRIITLEFDGFFVTQVYTPNAGDGLKRLDDRQV-WDAKYAEYLATLDEQKPVLA 211
Query: 73 TGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHRGVVG-YTYW 131
TGD N AH+EID+ NPA NRRS GFTDEER F N L+KGF DTFR H + YT+W
Sbjct: 212 TGDYNVAHKEIDLANPASNRRSPGFTDEERAGF-TNLLAKGFTDTFRHLHGDIPNQYTWW 270
Query: 132 GYRHGGRKTNR-GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL 182
R K N GWR+DY+L S +ADK S ++ DH+PI + ++L
Sbjct: 271 AQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQDHTPIVMEIEL 322
>gi|430751698|ref|YP_007214606.1| exodeoxyribonuclease III [Thermobacillus composti KWC4]
gi|430735663|gb|AGA59608.1| exodeoxyribonuclease III [Thermobacillus composti KWC4]
Length = 258
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 116/182 (63%), Gaps = 4/182 (2%)
Query: 1 IKPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSY 60
+PLSV GL D D EGR++T EF +FFL++ Y PN+ L RL YRI W+ +Y
Sbjct: 72 FEPLSVRKGLSDGD-DPEGRVLTLEFPAFFLVNVYTPNARRDLSRLEYRIA-WEERFRAY 129
Query: 61 VKELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRA 120
+KEL+ +KPV++ GDLN AH+EID+ N NR +AGFTDEER++ L GF DTFR
Sbjct: 130 LKELDARKPVVVCGDLNVAHREIDLKNAKFNRGNAGFTDEEREAM-TRLLEAGFTDTFRH 188
Query: 121 QHRGVV-GYTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLI 179
+ YT+W + R+ N GWR+DYFLVS LA D+ I + GSDH P+GL+
Sbjct: 189 FYPDRTDAYTWWSFMPKVRERNIGWRIDYFLVSARLAPYLEDALIDSGIMGSDHCPVGLL 248
Query: 180 LK 181
++
Sbjct: 249 MR 250
>gi|403071080|ref|ZP_10912412.1| exodeoxyribonuclease [Oceanobacillus sp. Ndiop]
Length = 253
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 112/178 (62%), Gaps = 3/178 (1%)
Query: 2 KPLSVTYGLGISDHDSEGRLVTAEFDSFFLLSCYVPNSGDGLRRLSYRITEWDPSLSSYV 61
KPL V YGLG D+ EGR++T EF+ FFL++ Y PNS L RL YR+ EW+ L SY+
Sbjct: 72 KPLHVRYGLGKEDNQEEGRIITLEFNEFFLVNVYTPNSKRDLTRLDYRL-EWEDELYSYL 130
Query: 62 KELEKKKPVILTGDLNCAHQEIDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQ 121
+EL+++KPVI GDLN AHQEID+ N N ++GFT +ER L GFVDT R
Sbjct: 131 RELDEEKPVIYCGDLNVAHQEIDLKNHKTNHGNSGFTAQERGKM-TRLLDSGFVDTLRHF 189
Query: 122 HRGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGL 178
H G Y++W Y R+ N GWR+DYF+VS+ L +S + V GSDH P+ L
Sbjct: 190 HPDKEGIYSWWSYMKTIRERNIGWRIDYFIVSKRLVPYLKNSDVHSLVMGSDHCPVAL 247
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.140 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,203,087,513
Number of Sequences: 23463169
Number of extensions: 137471814
Number of successful extensions: 259330
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3847
Number of HSP's successfully gapped in prelim test: 1727
Number of HSP's that attempted gapping in prelim test: 247249
Number of HSP's gapped (non-prelim): 5714
length of query: 182
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 49
effective length of database: 9,238,593,890
effective search space: 452691100610
effective search space used: 452691100610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 72 (32.3 bits)