Query 048139
Match_columns 115
No_of_seqs 108 out of 1041
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 11:19:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048139.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048139hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kwu_A MUNC13-1; calcium bindi 99.9 3.8E-24 1.3E-28 127.8 15.2 107 4-113 12-129 (148)
2 2dmh_A Myoferlin; beta-sandwic 99.9 5.8E-24 2E-28 125.9 13.8 107 5-113 3-116 (140)
3 2fk9_A Protein kinase C, ETA t 99.9 7E-24 2.4E-28 127.7 12.0 105 6-112 26-145 (157)
4 2b3r_A Phosphatidylinositol-4- 99.9 1.5E-23 5.3E-28 123.4 12.9 106 7-114 18-132 (134)
5 2ep6_A MCTP2 protein; beta san 99.9 2.4E-24 8.1E-29 126.6 9.2 105 7-114 11-115 (133)
6 3rdl_A Protein kinase C alpha 99.9 1.7E-23 5.6E-28 123.4 12.2 105 7-113 14-125 (137)
7 1wfj_A Putative elicitor-respo 99.9 8.3E-24 2.8E-28 124.6 10.7 106 6-111 7-113 (136)
8 3f04_A Synaptotagmin-1; C2A, c 99.9 1.2E-23 4.2E-28 124.9 10.8 105 7-112 32-142 (143)
9 3b7y_A E3 ubiquitin-protein li 99.9 2.5E-23 8.7E-28 124.8 12.2 107 6-113 17-135 (153)
10 1rsy_A Synaptotagmin I; calciu 99.9 4.2E-23 1.4E-27 123.8 13.0 106 7-113 40-151 (152)
11 2d8k_A Synaptotagmin VII; exoc 99.9 5.5E-23 1.9E-27 121.9 13.2 107 7-114 24-137 (141)
12 3m7f_B E3 ubiquitin-protein li 99.9 5.5E-23 1.9E-27 126.0 13.0 107 6-113 5-123 (176)
13 3fdw_A Synaptotagmin-like prot 99.9 1.2E-23 4E-28 125.7 9.7 107 7-114 21-136 (148)
14 1rlw_A Phospholipase A2, CALB 99.9 3.1E-23 1.1E-27 120.7 10.7 103 8-112 2-111 (126)
15 1gmi_A Protein kinase C, epsil 99.9 2.3E-23 7.9E-28 122.9 9.9 105 6-112 3-121 (136)
16 3pyc_A E3 ubiquitin-protein li 99.9 8.8E-23 3E-27 119.8 12.2 106 6-113 2-113 (132)
17 1a25_A CALB, protein kinase C 99.9 9E-23 3.1E-27 122.0 12.4 105 7-113 29-140 (149)
18 2q3x_A Regulating synaptic mem 99.9 4.2E-23 1.4E-27 126.1 11.0 106 7-113 28-140 (171)
19 3fbk_A RGS3, RGP3, regulator o 99.9 1.1E-22 3.7E-27 122.2 12.4 107 6-114 24-139 (153)
20 2z0u_A WW domain-containing pr 99.9 2.7E-23 9.2E-28 125.1 9.3 105 7-112 41-155 (155)
21 2bwq_A Regulating synaptic mem 99.9 1E-22 3.5E-27 118.9 11.4 103 7-111 16-129 (129)
22 1ugk_A Synaptotagmin IV, KIAA1 99.9 1.8E-22 6E-27 119.3 11.6 107 7-114 20-135 (138)
23 1rh8_A Piccolo protein; beta-s 99.9 1.4E-23 4.7E-28 124.5 6.4 107 8-115 17-141 (142)
24 1v27_A Regulating synaptic mem 99.9 9E-23 3.1E-27 120.8 9.2 106 7-114 19-135 (141)
25 2dmg_A KIAA1228 protein; beta- 99.9 1.9E-22 6.5E-27 119.6 10.2 106 7-114 22-137 (142)
26 2chd_A Rabphilin-3A, exophilin 99.9 2.5E-22 8.5E-27 119.1 10.5 105 7-112 27-140 (142)
27 2nq3_A Itchy homolog E3 ubiqui 99.9 7.6E-22 2.6E-26 120.7 12.7 105 7-113 34-143 (173)
28 2enp_A B/K protein; C2 type 1, 99.9 3.1E-22 1.1E-26 119.4 9.7 106 7-113 24-142 (147)
29 1wfm_A Synaptotagmin XIII; C2 99.9 1.1E-21 3.6E-26 116.0 11.8 104 7-114 24-134 (138)
30 3n5a_A Synaptotagmin-7; calciu 99.9 3.2E-21 1.1E-25 113.6 11.8 91 7-98 14-112 (138)
31 2cm5_A Rabphilin-3A; protein t 99.9 5.1E-21 1.8E-25 116.2 12.9 107 7-114 35-161 (166)
32 1tjx_A Similar to synaptotagmi 99.9 6.5E-21 2.2E-25 115.0 13.0 106 7-113 23-148 (159)
33 1w15_A Synaptotagmin IV; metal 99.9 1.9E-20 6.6E-25 112.2 12.9 90 7-97 28-125 (153)
34 2cjt_A UNC-13 homolog A, MUNC1 99.9 6.7E-21 2.3E-25 111.8 9.8 90 7-102 3-92 (131)
35 2r83_A Synaptotagmin-1; C2A-C2 99.8 3.8E-20 1.3E-24 120.6 13.6 106 7-113 17-128 (284)
36 3jzy_A Intersectin 2; C2 domai 99.8 8E-20 2.7E-24 127.2 13.0 108 5-113 383-495 (510)
37 2cjs_A UNC-13 homolog A, MUNC1 99.8 8.9E-20 3E-24 110.9 10.4 89 8-102 13-101 (167)
38 3l9b_A Otoferlin; C2-domain, b 99.8 2.5E-19 8.4E-24 105.0 11.0 100 10-114 22-124 (144)
39 3nsj_A Perforin-1; pore formin 99.8 5.6E-19 1.9E-23 123.6 12.6 98 8-111 393-492 (540)
40 1dqv_A Synaptotagmin III; beta 99.8 8.6E-19 2.9E-23 115.0 10.9 106 7-113 18-131 (296)
41 2r83_A Synaptotagmin-1; C2A-C2 99.8 4E-18 1.4E-22 111.0 12.8 106 7-113 148-273 (284)
42 1cjy_A CPLA2, protein (cytosol 99.8 6.3E-19 2.2E-23 126.8 8.4 104 7-112 16-126 (749)
43 1djx_A PLC-D1, phosphoinositid 99.8 5.1E-18 1.8E-22 120.6 12.8 107 6-115 494-608 (624)
44 1dqv_A Synaptotagmin III; beta 99.7 1.6E-18 5.5E-23 113.7 4.5 92 7-99 150-249 (296)
45 3pfq_A PKC-B, PKC-beta, protei 99.7 6.8E-17 2.3E-21 115.9 10.7 105 7-113 170-281 (674)
46 3bxj_A RAS GTPase-activating p 99.7 3.4E-18 1.1E-22 118.7 -0.3 99 8-112 10-116 (483)
47 3qr0_A Phospholipase C-beta (P 99.6 2.1E-14 7.1E-19 104.5 11.8 98 7-115 648-755 (816)
48 3ohm_B 1-phosphatidylinositol- 99.6 2.6E-14 9E-19 104.5 9.8 98 7-115 723-829 (885)
49 2zkm_X 1-phosphatidylinositol- 99.6 5.3E-14 1.8E-18 102.4 11.3 99 6-115 675-783 (799)
50 1yrk_A NPKC-delta, protein kin 99.2 2.8E-09 9.4E-14 61.0 13.1 100 8-112 5-113 (126)
51 2enj_A NPKC-theta, protein kin 99.1 3.3E-09 1.1E-13 61.5 11.8 102 6-112 7-118 (138)
52 3l4c_A Dedicator of cytokinesi 96.6 0.054 1.9E-06 34.0 10.3 93 3-97 21-139 (220)
53 2yrb_A Protein fantom; beta sa 96.4 0.063 2.1E-06 31.9 9.0 106 6-114 15-133 (156)
54 2wxf_A Phosphatidylinositol-4, 95.7 0.14 4.7E-06 38.8 9.8 90 7-100 215-326 (940)
55 3hhm_A Phosphatidylinositol-4, 94.9 0.49 1.7E-05 36.4 10.7 92 6-100 352-457 (1091)
56 1e7u_A Phosphatidylinositol 3- 92.0 2 6.9E-05 32.8 9.7 91 8-100 217-332 (961)
57 2y3a_A Phosphatidylinositol-4, 91.3 0.27 9.1E-06 37.8 4.5 89 7-99 351-471 (1092)
58 4e81_A Chaperone protein DNAK; 26.4 1.2E+02 0.004 18.7 8.4 49 45-94 21-72 (219)
59 2hc5_A ORF 99, hypothetical pr 25.3 92 0.0031 17.3 3.2 38 57-99 54-91 (117)
60 3h0x_A 78 kDa glucose-regulate 23.8 1.1E+02 0.0038 17.6 7.2 49 45-94 20-71 (152)
61 3dob_A Heat shock 70 kDa prote 22.9 1.2E+02 0.004 17.5 8.4 49 45-94 20-71 (152)
62 3n8e_A Stress-70 protein, mito 20.4 1.5E+02 0.0051 17.7 7.2 49 45-94 40-91 (182)
No 1
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.93 E-value=3.8e-24 Score=127.80 Aligned_cols=107 Identities=27% Similarity=0.402 Sum_probs=93.1
Q ss_pred ccccCceEEEEEeeecCCCCCCCCCCCCcEEEEEECCeEEEEEEecCCCCCCeeceeEEEeecCCCceEEEEEEeCCCC-
Q 048139 4 SGIQGLPLEITVVGCYNLDDKEWISRQDPYVCLEYGSSKYRTKTCTDGGKNPTFQEKFVLPLIEGLRELNVVVWNSHTL- 82 (115)
Q Consensus 4 ~~~~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~~~~~~t~~~~~~~~~P~w~e~~~~~~~~~~~~L~~~v~~~~~~- 82 (115)
++...+.|.|+|++|++|+..+..+.+||||.+.++...++|+++.+ +.||.|+|.|.|.+......|.|+|||++..
T Consensus 12 ~~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~-t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~ 90 (148)
T 3kwu_A 12 TSKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYG-NLNPVWEENFHFECHNSSDRIKVRVLDEDDDI 90 (148)
T ss_dssp ---CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCS-CSSCEEEEEEEEEECSTTCEEEEEEEECCCSH
T ss_pred ccccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCC-CCCCCcccEEEEEecCCCCEEEEEEEECCCCc
Confidence 45567999999999999999888899999999999999999999887 9999999999999966668899999999875
Q ss_pred ----------CCCceeEEEEEEcchhhccCeeeeEEecccC
Q 048139 83 ----------TPDEFIGSGRIQLHKALSQGFDDAAWPLQTK 113 (115)
Q Consensus 83 ----------~~~~~lG~~~v~l~~l~~~~~~~~~~~L~~~ 113 (115)
+++++||++.+++.++ .+....|++|..+
T Consensus 91 ~~~~~~~~~~~~~~~lG~~~i~l~~l--~~~~~~w~~L~~~ 129 (148)
T 3kwu_A 91 KSRVKQRFKRESDDFLGQTIIEVRTL--SGEMDVWYNLDKR 129 (148)
T ss_dssp HHHHHTTTSSCSSEEEEEEEEEGGGC--CSEEEEEEECBCS
T ss_pred cccccccccCCCCccEEEEEEEHHHC--cCCCCEEEEcccC
Confidence 7899999999999998 3456778898754
No 2
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.92 E-value=5.8e-24 Score=125.89 Aligned_cols=107 Identities=19% Similarity=0.292 Sum_probs=93.9
Q ss_pred cccCceEEEEEeeecCCCCCCCCCCCCcEEEEEECCeEEEEEEecCCCCCCeeceeEEEeecC----CCceEEEEEEeCC
Q 048139 5 GIQGLPLEITVVGCYNLDDKEWISRQDPYVCLEYGSSKYRTKTCTDGGKNPTFQEKFVLPLIE----GLRELNVVVWNSH 80 (115)
Q Consensus 5 ~~~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~~~~~~t~~~~~~~~~P~w~e~~~~~~~~----~~~~L~~~v~~~~ 80 (115)
+-..+.|.|+|++|++|+..+. +.+||||++.+...+++|+++++ +.||.|||.|.|.+.. ....|.|+|||++
T Consensus 3 s~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d 80 (140)
T 2dmh_A 3 SGSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDN-ELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFE 80 (140)
T ss_dssp SCBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCS-CSSCEEEEEEEEECSSCCCCTTCEEEEEEEETT
T ss_pred CCCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecC-CCCCccCcEEEEEecccccCCCCEEEEEEEECC
Confidence 3467899999999999998888 89999999999988999999886 8999999999999843 3578999999999
Q ss_pred CCCCCceeEEEEEEcchhhccCeeeeEEe---cccC
Q 048139 81 TLTPDEFIGSGRIQLHKALSQGFDDAAWP---LQTK 113 (115)
Q Consensus 81 ~~~~~~~lG~~~v~l~~l~~~~~~~~~~~---L~~~ 113 (115)
..+++++||++.+++.++..++....|+. |.+.
T Consensus 81 ~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~ 116 (140)
T 2dmh_A 81 TIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNE 116 (140)
T ss_dssp CSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECT
T ss_pred CCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCC
Confidence 88899999999999999987777677776 6543
No 3
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.92 E-value=7e-24 Score=127.70 Aligned_cols=105 Identities=19% Similarity=0.301 Sum_probs=90.1
Q ss_pred ccCceEEEEEeeecCCCCCCC----------CCCCCcEEEEEECCeE-EEEEEecCCCCCCeeceeEEEeecCCCceEEE
Q 048139 6 IQGLPLEITVVGCYNLDDKEW----------ISRQDPYVCLEYGSSK-YRTKTCTDGGKNPTFQEKFVLPLIEGLRELNV 74 (115)
Q Consensus 6 ~~~~~l~v~i~~a~~l~~~~~----------~~~~~p~~~~~~~~~~-~~t~~~~~~~~~P~w~e~~~~~~~~~~~~L~~ 74 (115)
...+.|+|+|++|++|+..+. .+.+||||++.++... .+|+++.+ +.||.|||+|.|.+.. ...|.|
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~k-tlnP~WNE~F~f~v~~-~~~L~~ 103 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQK-TNKPTYNEEFCANVTD-GGHLEL 103 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSS-CSSCEEEEEEEEEEEE-ECEEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCC-CCCCccCcEEEEEcCC-CCEEEE
Confidence 566899999999999997763 2568999999998765 68998776 9999999999999864 368999
Q ss_pred EEEeCCCCCCCceeEEEEEEcchhhcc----CeeeeEEeccc
Q 048139 75 VVWNSHTLTPDEFIGSGRIQLHKALSQ----GFDDAAWPLQT 112 (115)
Q Consensus 75 ~v~~~~~~~~~~~lG~~~v~l~~l~~~----~~~~~~~~L~~ 112 (115)
+|||++..+++++||++.+++.++... +....|++|.+
T Consensus 104 ~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~ 145 (157)
T 2fk9_A 104 AVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP 145 (157)
T ss_dssp EEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS
T ss_pred EEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC
Confidence 999999888999999999999999865 56778889864
No 4
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.91 E-value=1.5e-23 Score=123.41 Aligned_cols=106 Identities=26% Similarity=0.275 Sum_probs=91.4
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEE-----CCeEEEEEEecCCCCCCeeceeEEEe-ecC---CCceEEEEEE
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEY-----GSSKYRTKTCTDGGKNPTFQEKFVLP-LIE---GLRELNVVVW 77 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~-----~~~~~~t~~~~~~~~~P~w~e~~~~~-~~~---~~~~L~~~v~ 77 (115)
..+.|.|+|++|++|+. +..+.+||||++.+ ...+++|+++++ +.||.|||+|.|. +.. ....|.|+||
T Consensus 18 ~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~ 95 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRK-TRNPTFNEMLVYSGYSKETLRQRELQLSVL 95 (134)
T ss_dssp ETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCS-CSSCEEEEEEEEESCCHHHHTTCEEEEEEE
T ss_pred cCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcC-CCCCCCccEEEECCcCHHHhCcCEEEEEEE
Confidence 56899999999999986 66788999999998 356889999887 9999999999999 642 3478999999
Q ss_pred eCCCCCCCceeEEEEEEcchhhccCeeeeEEecccCC
Q 048139 78 NSHTLTPDEFIGSGRIQLHKALSQGFDDAAWPLQTKT 114 (115)
Q Consensus 78 ~~~~~~~~~~lG~~~v~l~~l~~~~~~~~~~~L~~~~ 114 (115)
|++..+++++||++.+++.++..+.....|++|.++.
T Consensus 96 d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 132 (134)
T 2b3r_A 96 SAESLRENFFLGGITLPLKDFNLSKETVKWYQLTAAT 132 (134)
T ss_dssp ECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC--
T ss_pred ECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCCcc
Confidence 9998888999999999999998877778899998753
No 5
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.91 E-value=2.4e-24 Score=126.64 Aligned_cols=105 Identities=23% Similarity=0.394 Sum_probs=93.4
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEECCeEEEEEEecCCCCCCeeceeEEEeecCCCceEEEEEEeCCCCCCCc
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEYGSSKYRTKTCTDGGKNPTFQEKFVLPLIEGLRELNVVVWNSHTLTPDE 86 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~~~~~~t~~~~~~~~~P~w~e~~~~~~~~~~~~L~~~v~~~~~~~~~~ 86 (115)
..+.|.|+|++|++|+..+..+.+||||++.+....++|+++.+ +.||.|+|+|.|.+......|.|+|||++..++++
T Consensus 11 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~-t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~~~~~ 89 (133)
T 2ep6_A 11 DVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYK-NLNPEWNKVFTFPIKDIHDVLEVTVFDEDGDKPPD 89 (133)
T ss_dssp CSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSS-CSSCCCCEEEEEEESCTTCEEEEEEEEEETTEEEE
T ss_pred CceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecC-CCCCccccEEEEEecCCCCEEEEEEEECCCCCCCC
Confidence 56899999999999999888899999999999999999999887 99999999999999766678999999999888899
Q ss_pred eeEEEEEEcchhhccCeeeeEEecccCC
Q 048139 87 FIGSGRIQLHKALSQGFDDAAWPLQTKT 114 (115)
Q Consensus 87 ~lG~~~v~l~~l~~~~~~~~~~~L~~~~ 114 (115)
+||++.+++.++..+. ..|++|.+++
T Consensus 90 ~lG~~~i~l~~l~~~~--~~w~~L~~~~ 115 (133)
T 2ep6_A 90 FLGKVAIPLLSIRDGQ--PNCYVLKNKD 115 (133)
T ss_dssp ECCBCEEEGGGCCSSC--CEECCCBCSC
T ss_pred eeEEEEEEHHHccCCC--ceEEEeecCC
Confidence 9999999999986533 4677887653
No 6
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.91 E-value=1.7e-23 Score=123.41 Aligned_cols=105 Identities=28% Similarity=0.372 Sum_probs=92.7
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEE-----CCeEEEEEEecCCCCCCeeceeEEEeecC--CCceEEEEEEeC
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEY-----GSSKYRTKTCTDGGKNPTFQEKFVLPLIE--GLRELNVVVWNS 79 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~-----~~~~~~t~~~~~~~~~P~w~e~~~~~~~~--~~~~L~~~v~~~ 79 (115)
..+.|.|+|++|++|+..+..+.+||||++.+ ....++|+++.+ +.||.|+|.|.|.+.. ....|.|+|||+
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~-t~nP~wne~f~f~~~~~~~~~~l~i~v~d~ 92 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRS-TLNPQWNESFTFKLKPSDKDRRLSVEIWDW 92 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCS-CSSCEEEEEEEEECCGGGGGCEEEEEEEEC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcC-CCCCCcccEEEEEcCchhcCCEEEEEEEEC
Confidence 46899999999999999888899999999998 466899999887 8999999999999843 235799999999
Q ss_pred CCCCCCceeEEEEEEcchhhccCeeeeEEecccC
Q 048139 80 HTLTPDEFIGSGRIQLHKALSQGFDDAAWPLQTK 113 (115)
Q Consensus 80 ~~~~~~~~lG~~~v~l~~l~~~~~~~~~~~L~~~ 113 (115)
+..+++++||++.+++.++...+ ..+||.|.++
T Consensus 93 d~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 125 (137)
T 3rdl_A 93 DRTTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQ 125 (137)
T ss_dssp CSSSCCEEEEEEEEEHHHHHHSC-EEEEEECBCH
T ss_pred CCCCCCceEEEEEEeHHHhccCc-cCceEECcCc
Confidence 98889999999999999998766 7788898764
No 7
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.91 E-value=8.3e-24 Score=124.65 Aligned_cols=106 Identities=24% Similarity=0.463 Sum_probs=93.3
Q ss_pred ccCceEEEEEeeecCCCCCCCCCCCCcEEEEEECCeEEEEEEecCCCCCCeeceeEEEeecCCCceEEEEEEeCCCCCCC
Q 048139 6 IQGLPLEITVVGCYNLDDKEWISRQDPYVCLEYGSSKYRTKTCTDGGKNPTFQEKFVLPLIEGLRELNVVVWNSHTLTPD 85 (115)
Q Consensus 6 ~~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~~~~~~t~~~~~~~~~P~w~e~~~~~~~~~~~~L~~~v~~~~~~~~~ 85 (115)
...+.|.|+|++|++|+..+..+.+||||++.+....++|+++.+++.||.|+|+|.|.+......|.|+|||++..+++
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~~~d 86 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGTED 86 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSCTTT
T ss_pred CCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCCCCC
Confidence 46689999999999999988888999999999998889999987349999999999999977678999999999988899
Q ss_pred ceeEEEEEEcchhhccC-eeeeEEecc
Q 048139 86 EFIGSGRIQLHKALSQG-FDDAAWPLQ 111 (115)
Q Consensus 86 ~~lG~~~v~l~~l~~~~-~~~~~~~L~ 111 (115)
++||++.+++.++...+ ....||+|.
T Consensus 87 ~~lG~~~i~l~~l~~~~~~~~~w~~L~ 113 (136)
T 1wfj_A 87 DAVGEATIPLEPVFVEGSIPPTAYNVV 113 (136)
T ss_dssp CCSEEEEEESHHHHHHSEEEEEEEEEE
T ss_pred ceEEEEEEEHHHhccCCCCCcEEEEee
Confidence 99999999999995544 355677875
No 8
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.91 E-value=1.2e-23 Score=124.93 Aligned_cols=105 Identities=21% Similarity=0.308 Sum_probs=92.9
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEE---CCeEEEEEEecCCCCCCeeceeEEEeecC---CCceEEEEEEeCC
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEY---GSSKYRTKTCTDGGKNPTFQEKFVLPLIE---GLRELNVVVWNSH 80 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~---~~~~~~t~~~~~~~~~P~w~e~~~~~~~~---~~~~L~~~v~~~~ 80 (115)
..+.|.|+|++|++|+..+..+.+||||++.+ ....++|+++++ +.||.|+|+|.|.+.. ....|.|+|||++
T Consensus 32 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 110 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRK-TLNPVFNEQFTFKVPYSELGGKTLVMAVYDFD 110 (143)
T ss_dssp TTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCS-CSSCEEEEEEEECCCHHHHTTCEEEEEEEECC
T ss_pred CCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcC-CCCCcCcCeEEEeecHhhcCCCEEEEEEEeCC
Confidence 56789999999999998888888999999998 456899999887 9999999999999842 3478999999999
Q ss_pred CCCCCceeEEEEEEcchhhccCeeeeEEeccc
Q 048139 81 TLTPDEFIGSGRIQLHKALSQGFDDAAWPLQT 112 (115)
Q Consensus 81 ~~~~~~~lG~~~v~l~~l~~~~~~~~~~~L~~ 112 (115)
..+++++||++.++|.++..+.....|++|.+
T Consensus 111 ~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 111 RFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp SSSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CCCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 88899999999999999988777788889875
No 9
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.91 E-value=2.5e-23 Score=124.80 Aligned_cols=107 Identities=21% Similarity=0.326 Sum_probs=87.1
Q ss_pred ccCceEEEEEeeecCCCCCCCCCCCCcEEEEEECC------eEEEEEEecCCCCCCeeceeEEEeecCCCceEEEEEEeC
Q 048139 6 IQGLPLEITVVGCYNLDDKEWISRQDPYVCLEYGS------SKYRTKTCTDGGKNPTFQEKFVLPLIEGLRELNVVVWNS 79 (115)
Q Consensus 6 ~~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~~------~~~~t~~~~~~~~~P~w~e~~~~~~~~~~~~L~~~v~~~ 79 (115)
...+.|.|+|++|++|+..+..+.+||||++.+.. ..++|+++.+ +.||.|||.|.|.+......|.|+|||+
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~~~l~~~V~d~ 95 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKK-SLNPKWNEEILFRVHPQQHRLLFEVFDE 95 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSS-CSSCCCCEEEEEEECTTTCEEEEEEEEC
T ss_pred CCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccC-CCCCCCCCEEEEEecCCCCEEEEEEEEC
Confidence 45679999999999999888888999999999862 5789999887 9999999999999976667899999999
Q ss_pred CCCCCCceeEEEEEEcchhhccCee------eeEEecccC
Q 048139 80 HTLTPDEFIGSGRIQLHKALSQGFD------DAAWPLQTK 113 (115)
Q Consensus 80 ~~~~~~~~lG~~~v~l~~l~~~~~~------~~~~~L~~~ 113 (115)
+..+++++||++.+++.++...... ..|+.|.++
T Consensus 96 d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~ 135 (153)
T 3b7y_A 96 NRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPR 135 (153)
T ss_dssp CSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCS
T ss_pred CCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccc
Confidence 9888999999999999999775532 478898765
No 10
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.91 E-value=4.2e-23 Score=123.81 Aligned_cols=106 Identities=21% Similarity=0.294 Sum_probs=93.2
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEEC---CeEEEEEEecCCCCCCeeceeEEEeecC---CCceEEEEEEeCC
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEYG---SSKYRTKTCTDGGKNPTFQEKFVLPLIE---GLRELNVVVWNSH 80 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~---~~~~~t~~~~~~~~~P~w~e~~~~~~~~---~~~~L~~~v~~~~ 80 (115)
..+.|.|+|++|++|+..+..+.+||||++.+. ...++|+++++ +.||.|||.|.|.+.. ....|.|+|||++
T Consensus 40 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 118 (152)
T 1rsy_A 40 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRK-TLNPVFNEQFTFKVPYSELGGKTLVMAVYDFD 118 (152)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTT-CSSCEEEEEEEECCCHHHHTTCEEEEEEEECC
T ss_pred CCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCC-CCCCcCcccEEEeecHHHcCCCEEEEEEEECC
Confidence 467899999999999998888899999999983 56889999887 9999999999999843 3578999999999
Q ss_pred CCCCCceeEEEEEEcchhhccCeeeeEEecccC
Q 048139 81 TLTPDEFIGSGRIQLHKALSQGFDDAAWPLQTK 113 (115)
Q Consensus 81 ~~~~~~~lG~~~v~l~~l~~~~~~~~~~~L~~~ 113 (115)
..+++++||++.+++.++..+.....|++|.+.
T Consensus 119 ~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 151 (152)
T 1rsy_A 119 RFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSA 151 (152)
T ss_dssp SSSCCEEEEEEEEEGGGCCCSSCEEEEEECBCC
T ss_pred CCCCCcEEEEEEEEchhccCCCCcceEEECCCC
Confidence 888999999999999999777777888899764
No 11
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.91 E-value=5.5e-23 Score=121.87 Aligned_cols=107 Identities=21% Similarity=0.257 Sum_probs=93.4
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEEC---CeEEEEEEecCCCCCCeeceeEEEeecC----CCceEEEEEEeC
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEYG---SSKYRTKTCTDGGKNPTFQEKFVLPLIE----GLRELNVVVWNS 79 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~---~~~~~t~~~~~~~~~P~w~e~~~~~~~~----~~~~L~~~v~~~ 79 (115)
..+.|.|+|++|++|+..+..+.+||||++.+. ...++|+++.+ +.||.|||.|.|.+.+ ....|.|+|||+
T Consensus 24 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 102 (141)
T 2d8k_A 24 QESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRK-NLNPHWNETFLFEGFPYEKVVQRILYLQVLDY 102 (141)
T ss_dssp SSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTT-CSSCCCCEEEEECSCCHHHHTTSEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcC-CCCCccccEEEECccCHHHcccCEEEEEEEEC
Confidence 568899999999999998888899999999984 46889999876 9999999999998522 357899999999
Q ss_pred CCCCCCceeEEEEEEcchhhccCeeeeEEecccCC
Q 048139 80 HTLTPDEFIGSGRIQLHKALSQGFDDAAWPLQTKT 114 (115)
Q Consensus 80 ~~~~~~~~lG~~~v~l~~l~~~~~~~~~~~L~~~~ 114 (115)
+..+++++||++.+++.++..+.....|++|.++.
T Consensus 103 d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 137 (141)
T 2d8k_A 103 DRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPSG 137 (141)
T ss_dssp CSSSSCEEEEEEEEETTTSCTTSCEEEEECCEECC
T ss_pred CCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCCC
Confidence 98889999999999999998877778888987654
No 12
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.90 E-value=5.5e-23 Score=126.01 Aligned_cols=107 Identities=20% Similarity=0.355 Sum_probs=85.9
Q ss_pred ccCceEEEEEeeecCCCCCCCCCCCCcEEEEEECC------eEEEEEEecCCCCCCeeceeEEEeecCCCceEEEEEEeC
Q 048139 6 IQGLPLEITVVGCYNLDDKEWISRQDPYVCLEYGS------SKYRTKTCTDGGKNPTFQEKFVLPLIEGLRELNVVVWNS 79 (115)
Q Consensus 6 ~~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~~------~~~~t~~~~~~~~~P~w~e~~~~~~~~~~~~L~~~v~~~ 79 (115)
-..+.|.|+|++|++|+..+..+.+||||++.+.. ..++|+++++ +.||.|+|.|.|.+......|.|+|||+
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~-t~nP~Wne~f~f~v~~~~~~L~~~V~d~ 83 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKK-SLNPKWNEEILFRVLPQRHRILFEVFDE 83 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSS-CSSCEEEEEEEEEECTTTCEEEEEEEEC
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECC-CCCCcccceEEEEEcCCCCEEEEEEEEC
Confidence 45689999999999999988889999999999864 5789999886 9999999999999977667999999999
Q ss_pred CCCCCCceeEEEEEEcchhhccCee-e-----eEEecccC
Q 048139 80 HTLTPDEFIGSGRIQLHKALSQGFD-D-----AAWPLQTK 113 (115)
Q Consensus 80 ~~~~~~~~lG~~~v~l~~l~~~~~~-~-----~~~~L~~~ 113 (115)
+..+++++||++.++|..+...+.. . .||.|..+
T Consensus 84 d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~ 123 (176)
T 3m7f_B 84 NRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPR 123 (176)
T ss_dssp C----CEEEEEEEEESCSCCBC------CCCCEEEECBCS
T ss_pred CCCCCCcEEEEEEEEHHHccccCCcccccccccEEEcccc
Confidence 9888999999999999999876543 1 68888764
No 13
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.90 E-value=1.2e-23 Score=125.72 Aligned_cols=107 Identities=26% Similarity=0.356 Sum_probs=92.5
Q ss_pred cCceEEEEEeeecCCCCCC-CCCCCCcEEEEEEC-----CeEEEEEEecCCCCCCeeceeEEEeecCC---CceEEEEEE
Q 048139 7 QGLPLEITVVGCYNLDDKE-WISRQDPYVCLEYG-----SSKYRTKTCTDGGKNPTFQEKFVLPLIEG---LRELNVVVW 77 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~-~~~~~~p~~~~~~~-----~~~~~t~~~~~~~~~P~w~e~~~~~~~~~---~~~L~~~v~ 77 (115)
..+.|.|+|++|++|+..+ ..+.+||||++.+. ..+++|+++++ +.||.|||+|.|.+... ...|.|+||
T Consensus 21 ~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~~~~~~L~~~V~ 99 (148)
T 3fdw_A 21 QTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRD-TVNPLYDETLRYEIPESLLAQRTLQFSVW 99 (148)
T ss_dssp TTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSS-CSSCEEEEEEEEECCSTTGGGCEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCC-CCCCcEeeEEEEEeChhHhCceEEEEEEE
Confidence 4678999999999999877 57889999999986 34889999887 99999999999998542 457999999
Q ss_pred eCCCCCCCceeEEEEEEcchhhccCeeeeEEecccCC
Q 048139 78 NSHTLTPDEFIGSGRIQLHKALSQGFDDAAWPLQTKT 114 (115)
Q Consensus 78 ~~~~~~~~~~lG~~~v~l~~l~~~~~~~~~~~L~~~~ 114 (115)
|++..+++++||++.+++.++..+.....|++|.++.
T Consensus 100 d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 136 (148)
T 3fdw_A 100 HHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKI 136 (148)
T ss_dssp EECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC-
T ss_pred ECCCCcCCcEEEEEEEEcccccccCCccceEECcCcc
Confidence 9998888999999999999998877778899998875
No 14
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.90 E-value=3.1e-23 Score=120.71 Aligned_cols=103 Identities=17% Similarity=0.310 Sum_probs=89.8
Q ss_pred CceEEEEEeeecCCCCC---CCCCCCCcEEEEEECC---eEEEEEEecCCCCCCeeceeEEEeec-CCCceEEEEEEeCC
Q 048139 8 GLPLEITVVGCYNLDDK---EWISRQDPYVCLEYGS---SKYRTKTCTDGGKNPTFQEKFVLPLI-EGLRELNVVVWNSH 80 (115)
Q Consensus 8 ~~~l~v~i~~a~~l~~~---~~~~~~~p~~~~~~~~---~~~~t~~~~~~~~~P~w~e~~~~~~~-~~~~~L~~~v~~~~ 80 (115)
.+.|.|+|++|++|+.. +..+.+||||++.+.. ..++|+++++ +.||.|||+|.|.+. +....|.|+|||++
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~~~~l~i~V~d~d 80 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNN-DINPVWNETFEFILDPNQENVLEITLMDAN 80 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTT-CSSCEEEEEEEEEECTTSCCEEEEEEEECC
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCC-CCCCcccceEEEEecCCCCCEEEEEEEECC
Confidence 57899999999999873 5568899999999974 7899999887 999999999999994 45678999999999
Q ss_pred CCCCCceeEEEEEEcchhhccCeeeeEEeccc
Q 048139 81 TLTPDEFIGSGRIQLHKALSQGFDDAAWPLQT 112 (115)
Q Consensus 81 ~~~~~~~lG~~~v~l~~l~~~~~~~~~~~L~~ 112 (115)
.. ++++||++.+++.++..+.....|++|.+
T Consensus 81 ~~-~~~~iG~~~i~l~~l~~~~~~~~~~~L~~ 111 (126)
T 1rlw_A 81 YV-MDETLGTATFTVSSMKVGEKKEVPFIFNQ 111 (126)
T ss_dssp SS-CCEEEEEEEEEGGGSCTTCEEEEEEEETT
T ss_pred CC-CCceeEEEEEEHHHccCCCcEEEEEEcCC
Confidence 76 58899999999999987777778888865
No 15
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.90 E-value=2.3e-23 Score=122.87 Aligned_cols=105 Identities=24% Similarity=0.456 Sum_probs=87.9
Q ss_pred ccCceEEEEEeeecCCCCCCCCCC-----------CCcEEEEEECCeE-EEEEEecCCCCCCeeceeEEEeecCCCceEE
Q 048139 6 IQGLPLEITVVGCYNLDDKEWISR-----------QDPYVCLEYGSSK-YRTKTCTDGGKNPTFQEKFVLPLIEGLRELN 73 (115)
Q Consensus 6 ~~~~~l~v~i~~a~~l~~~~~~~~-----------~~p~~~~~~~~~~-~~t~~~~~~~~~P~w~e~~~~~~~~~~~~L~ 73 (115)
...+.|.|+|++|++|+..+..++ +||||++.+.... .+|++..+ +.||.|||+|.|.+... ..|.
T Consensus 3 ~~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~-t~nP~WnE~f~f~v~~~-~~L~ 80 (136)
T 1gmi_A 3 VFNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQK-TNSPAWHDEFVTDVCNG-RKIE 80 (136)
T ss_dssp CEEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSS-CSSCEEEEEEEEEEEEE-CEEE
T ss_pred ccceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECC-CcCCccCCEEEEEecCC-CEEE
Confidence 456899999999999998765443 8999999998654 57887776 99999999999998654 7899
Q ss_pred EEEEeCCCCCCCceeEEEEEEcchhhccC--eeeeEEeccc
Q 048139 74 VVVWNSHTLTPDEFIGSGRIQLHKALSQG--FDDAAWPLQT 112 (115)
Q Consensus 74 ~~v~~~~~~~~~~~lG~~~v~l~~l~~~~--~~~~~~~L~~ 112 (115)
|+|||++..++|++||++.+++.++...+ ....|+.|.+
T Consensus 81 ~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~ 121 (136)
T 1gmi_A 81 LAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP 121 (136)
T ss_dssp EEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS
T ss_pred EEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC
Confidence 99999998889999999999999998753 3366778754
No 16
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.90 E-value=8.8e-23 Score=119.77 Aligned_cols=106 Identities=17% Similarity=0.277 Sum_probs=88.8
Q ss_pred ccCceEEEEEeeecCCCCCCCCCCCCcEEEEEECC--eEEEEEEecCCCCCCeeceeEEEeecCCCceEEEEEEeCCCCC
Q 048139 6 IQGLPLEITVVGCYNLDDKEWISRQDPYVCLEYGS--SKYRTKTCTDGGKNPTFQEKFVLPLIEGLRELNVVVWNSHTLT 83 (115)
Q Consensus 6 ~~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~~--~~~~t~~~~~~~~~P~w~e~~~~~~~~~~~~L~~~v~~~~~~~ 83 (115)
.....|+|+|++|++|+..+..+.+||||++.+.. ..++|+++.+ +.||.|+|.|.|.+.... .|.|+|||++..+
T Consensus 2 ~~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~-~l~~~v~d~d~~~ 79 (132)
T 3pyc_A 2 SEFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKN-TLDPKWNQHYDLYVGKTD-SITISVWNHKKIH 79 (132)
T ss_dssp CSEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSS-CSSCEEEEEEEEEEETTC-CEEEEEEEGGGTT
T ss_pred CCeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCC-CCCCCccCEEEEEeCCCC-EEEEEEEECCCCC
Confidence 34568999999999999998889999999999974 7899999876 999999999999986543 5999999998776
Q ss_pred C---CceeEEEEEEcchhhc-cCeeeeEEecccC
Q 048139 84 P---DEFIGSGRIQLHKALS-QGFDDAAWPLQTK 113 (115)
Q Consensus 84 ~---~~~lG~~~v~l~~l~~-~~~~~~~~~L~~~ 113 (115)
+ +++||++.+++.++.. .....+++.|..+
T Consensus 80 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~ 113 (132)
T 3pyc_A 80 KKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKL 113 (132)
T ss_dssp SSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCS
T ss_pred CCCCCCceEEEEEeHHHhhcccccCcEEEeeeec
Confidence 5 7899999999999844 3334566777655
No 17
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.90 E-value=9e-23 Score=121.99 Aligned_cols=105 Identities=28% Similarity=0.324 Sum_probs=91.7
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEEC-----CeEEEEEEecCCCCCCeeceeEEEeecCC--CceEEEEEEeC
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEYG-----SSKYRTKTCTDGGKNPTFQEKFVLPLIEG--LRELNVVVWNS 79 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~-----~~~~~t~~~~~~~~~P~w~e~~~~~~~~~--~~~L~~~v~~~ 79 (115)
..+.|.|+|++|++|+..+..+.+||||++.+. ...++|+++++ +.||.|+|+|.|.+... ...|.|+|||+
T Consensus 29 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~~~~~L~i~V~d~ 107 (149)
T 1a25_A 29 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKC-SLNPEWNETFRFQLKESDKDRRLSVEIWDW 107 (149)
T ss_dssp SSSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSS-CSSCEEEEEEEEECCSGGGGCEEEEEEEEC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCC-CCCCcCCcEEEEEeccccCCCEEEEEEEEC
Confidence 357899999999999998888899999999986 46889999887 99999999999998542 46899999999
Q ss_pred CCCCCCceeEEEEEEcchhhccCeeeeEEecccC
Q 048139 80 HTLTPDEFIGSGRIQLHKALSQGFDDAAWPLQTK 113 (115)
Q Consensus 80 ~~~~~~~~lG~~~v~l~~l~~~~~~~~~~~L~~~ 113 (115)
+..+++++||++.+++.++... ....||+|.+.
T Consensus 108 d~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~ 140 (149)
T 1a25_A 108 DLTSRNDFMGSLSFGISELQKA-GVDGWFKLLSQ 140 (149)
T ss_dssp CSSSCCEEEEEEEEEHHHHTTC-CEEEEEECBCH
T ss_pred CCCCCCCEEEEEEEEHHHhCcC-ccCCeEEccCC
Confidence 9888899999999999999775 46778898763
No 18
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.90 E-value=4.2e-23 Score=126.06 Aligned_cols=106 Identities=22% Similarity=0.281 Sum_probs=92.0
Q ss_pred cCceEEEEEeeecCCCCCCC-CCCCCcEEEEEECC-----eEEEEEEecCCCCCCeeceeEEEeecCCCceEEEEEE-eC
Q 048139 7 QGLPLEITVVGCYNLDDKEW-ISRQDPYVCLEYGS-----SKYRTKTCTDGGKNPTFQEKFVLPLIEGLRELNVVVW-NS 79 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~-~~~~~p~~~~~~~~-----~~~~t~~~~~~~~~P~w~e~~~~~~~~~~~~L~~~v~-~~ 79 (115)
..+.|.|+|++|++|+..+. .+.+||||++.+.. ..++|+++++ +.||.|||+|.|.+......|.|+|| |+
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~~~L~~~V~~d~ 106 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARK-TLDPLYQQSLVFDESPQGKVLQVIVWGDY 106 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCS-CSSCEEEEEEECSSCCTTEEEEEEEEEEC
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCC-CCCCCCCcEEEEEecCCCCEEEEEEEEcC
Confidence 46789999999999998875 68899999998852 3788999887 99999999999999766789999999 99
Q ss_pred CCCCCCceeEEEEEEcchhhccCeeeeEEecccC
Q 048139 80 HTLTPDEFIGSGRIQLHKALSQGFDDAAWPLQTK 113 (115)
Q Consensus 80 ~~~~~~~~lG~~~v~l~~l~~~~~~~~~~~L~~~ 113 (115)
+..+++++||++.+++.++..+....+|++|.+.
T Consensus 107 d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 107 GRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp STTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 9888999999999999999876777889999765
No 19
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.90 E-value=1.1e-22 Score=122.19 Aligned_cols=107 Identities=23% Similarity=0.347 Sum_probs=90.4
Q ss_pred ccCceEEEEEeeecCCCCCCCCCCCCcEEEEEEC-----CeEEEEEEecCCCCCCeeceeEEEee--cCCCceEEEEEEe
Q 048139 6 IQGLPLEITVVGCYNLDDKEWISRQDPYVCLEYG-----SSKYRTKTCTDGGKNPTFQEKFVLPL--IEGLRELNVVVWN 78 (115)
Q Consensus 6 ~~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~-----~~~~~t~~~~~~~~~P~w~e~~~~~~--~~~~~~L~~~v~~ 78 (115)
...+.|.|+|++|++|+..+ .+.+||||++.+. ...++|+++++ +.||.|||+|.|.+ ......|.|+|||
T Consensus 24 ~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~~~~~L~i~V~d 101 (153)
T 3fbk_A 24 AQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPD-CRDPAFHEHFFFPVQEEDDQKRLLVTVWN 101 (153)
T ss_dssp ESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTT-CSSCEEEEEEEEECCGGGTTSEEEEEEEE
T ss_pred CCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCC-CCCCccccEEEEecccHHhCCEEEEEEEe
Confidence 35688999999999999887 5889999999983 35789999887 99999999999998 3334569999999
Q ss_pred CCCCCC-CceeEEEEEEcchhhc-cCeeeeEEecccCC
Q 048139 79 SHTLTP-DEFIGSGRIQLHKALS-QGFDDAAWPLQTKT 114 (115)
Q Consensus 79 ~~~~~~-~~~lG~~~v~l~~l~~-~~~~~~~~~L~~~~ 114 (115)
++..++ +++||++.+++.++.. ......|+.|.++.
T Consensus 102 ~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~ 139 (153)
T 3fbk_A 102 RASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEH 139 (153)
T ss_dssp CCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTT
T ss_pred CCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChh
Confidence 998776 8999999999999985 55677888998754
No 20
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.90 E-value=2.7e-23 Score=125.13 Aligned_cols=105 Identities=16% Similarity=0.173 Sum_probs=90.9
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEECC------eEEEEEEecCCCCCCeeceeEEEeecC---CCceEEEEEE
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEYGS------SKYRTKTCTDGGKNPTFQEKFVLPLIE---GLRELNVVVW 77 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~~------~~~~t~~~~~~~~~P~w~e~~~~~~~~---~~~~L~~~v~ 77 (115)
..+.|.|.|++|++|+..+..+.+|||+++.+.. .+++|+++++ +.||.|||+|.|.+.. ....|.|+||
T Consensus 41 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~-tlnP~wnE~F~f~v~~~~l~~~~L~~~V~ 119 (155)
T 2z0u_A 41 KNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDA-SDTLVFNEVFWVSMSYPALHQKTLRVDVC 119 (155)
T ss_dssp TTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEEC-CSSEEEEEEEEEECCHHHHHHCEEEEEEE
T ss_pred CCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCC-CCCCccccEEEEEcCHHHhCcCEEEEEEE
Confidence 4678999999999999998889999999999854 2799999987 9999999999999853 2468999999
Q ss_pred eCCCCCCCceeEEEEEEcchhhc-cCeeeeEEeccc
Q 048139 78 NSHTLTPDEFIGSGRIQLHKALS-QGFDDAAWPLQT 112 (115)
Q Consensus 78 ~~~~~~~~~~lG~~~v~l~~l~~-~~~~~~~~~L~~ 112 (115)
|++..+++++||++.+++.++.. ......||.|++
T Consensus 120 d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~~ 155 (155)
T 2z0u_A 120 TTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLLS 155 (155)
T ss_dssp EECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEBC
T ss_pred ECCCCCCCcEEEEEEEEHHHccCCCCccccceEccC
Confidence 99988899999999999999954 455677888864
No 21
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.90 E-value=1e-22 Score=118.93 Aligned_cols=103 Identities=27% Similarity=0.463 Sum_probs=85.2
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEE-----CCeEEEEEEecCCCCCCeeceeEEEee-cC---CCceEEEEEE
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEY-----GSSKYRTKTCTDGGKNPTFQEKFVLPL-IE---GLRELNVVVW 77 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~-----~~~~~~t~~~~~~~~~P~w~e~~~~~~-~~---~~~~L~~~v~ 77 (115)
..+.|.|+|++|++|+..+..+.+||||++.+ ....++|+++++ +.||.|||+|.|.+ .. ....|.|+||
T Consensus 16 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~~~~~~~~~~~l~~~V~ 94 (129)
T 2bwq_A 16 VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKK-TLEPKWNQTFIYSPVHRREFRERMLEITLW 94 (129)
T ss_dssp TTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSS-BSSCEEEEEEEECSCCGGGGGGCEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccC-CCCCccccEEEEccCCHHHhcCCeEEEEEE
Confidence 45789999999999999888888999999998 356899999887 99999999999995 32 3478999999
Q ss_pred eCCCCCC--CceeEEEEEEcchhhccCeeeeEEecc
Q 048139 78 NSHTLTP--DEFIGSGRIQLHKALSQGFDDAAWPLQ 111 (115)
Q Consensus 78 ~~~~~~~--~~~lG~~~v~l~~l~~~~~~~~~~~L~ 111 (115)
|++..++ +++||++.+++.++...+ ..+||+|.
T Consensus 95 d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 95 DQARVREEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp EC-------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred ECCcCcCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 9998876 999999999999987765 67788874
No 22
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.89 E-value=1.8e-22 Score=119.28 Aligned_cols=107 Identities=15% Similarity=0.171 Sum_probs=89.7
Q ss_pred cCceEEEEEeeecCCCCCCCC-CCCCcEEEEEEC---CeEEEEEEecCCCCCCeeceeEEEe-ecC---CCceEEEEEEe
Q 048139 7 QGLPLEITVVGCYNLDDKEWI-SRQDPYVCLEYG---SSKYRTKTCTDGGKNPTFQEKFVLP-LIE---GLRELNVVVWN 78 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~-~~~~p~~~~~~~---~~~~~t~~~~~~~~~P~w~e~~~~~-~~~---~~~~L~~~v~~ 78 (115)
..+.|.|+|++|++|+..+.. +.+||||++.+. ...++|+++++ +.||.|||+|.|. +.. ....|.|+|||
T Consensus 20 ~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d 98 (138)
T 1ugk_A 20 ERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRK-TLDPAFDETFTFYGIPYTQIQELALHFTILS 98 (138)
T ss_dssp GGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSS-CSSCEEEEEEEEECCCSTTGGGCEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcC-CCCCcEeeEEEEcCcCHHHhccCEEEEEEEE
Confidence 457899999999999988875 789999999985 36899999886 9999999999996 643 34689999999
Q ss_pred CCCCCCCceeEEEEEEcchhhccCeeeeE-EecccCC
Q 048139 79 SHTLTPDEFIGSGRIQLHKALSQGFDDAA-WPLQTKT 114 (115)
Q Consensus 79 ~~~~~~~~~lG~~~v~l~~l~~~~~~~~~-~~L~~~~ 114 (115)
++..+++++||++.+++.++........| ++|..+.
T Consensus 99 ~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~~ 135 (138)
T 1ugk_A 99 FDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIISGP 135 (138)
T ss_dssp ECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBSSS
T ss_pred CCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhcCC
Confidence 99888999999999999999775444444 4887764
No 23
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.89 E-value=1.4e-23 Score=124.54 Aligned_cols=107 Identities=22% Similarity=0.320 Sum_probs=92.6
Q ss_pred CceEEEEEeeecCCCCCCCCCCCCcEEEEEECCe--------------EEEEEEecCCCCCCeeceeEEEe-ecC---CC
Q 048139 8 GLPLEITVVGCYNLDDKEWISRQDPYVCLEYGSS--------------KYRTKTCTDGGKNPTFQEKFVLP-LIE---GL 69 (115)
Q Consensus 8 ~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~~~--------------~~~t~~~~~~~~~P~w~e~~~~~-~~~---~~ 69 (115)
.+.|.|+|++|++|+..+..+.+||||++.+... .++|+++++ +.||.|||.|.|. +.. ..
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~v~~~~l~~ 95 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQK-SLNPEWNQTVIYKSISMEQLMK 95 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHH-HHSCEEEEEEEECSCCHHHHTT
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCC-CCCCCCCCEEEECCcCHHHccC
Confidence 5789999999999999988899999999999752 477888876 9999999999997 532 35
Q ss_pred ceEEEEEEeCCCCCCCceeEEEEEEcchhhccCeeeeEEecccCCC
Q 048139 70 RELNVVVWNSHTLTPDEFIGSGRIQLHKALSQGFDDAAWPLQTKTG 115 (115)
Q Consensus 70 ~~L~~~v~~~~~~~~~~~lG~~~v~l~~l~~~~~~~~~~~L~~~~~ 115 (115)
..|.|+|||++..+++++||++.+++.++........|++|.++.+
T Consensus 96 ~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 141 (142)
T 1rh8_A 96 KTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQTE 141 (142)
T ss_dssp CEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCCC
T ss_pred CEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCccCC
Confidence 6899999999988889999999999999987667788999988753
No 24
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.89 E-value=9e-23 Score=120.76 Aligned_cols=106 Identities=27% Similarity=0.460 Sum_probs=91.2
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEE-----CCeEEEEEEecCCCCCCeeceeEEEee-cC---CCceEEEEEE
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEY-----GSSKYRTKTCTDGGKNPTFQEKFVLPL-IE---GLRELNVVVW 77 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~-----~~~~~~t~~~~~~~~~P~w~e~~~~~~-~~---~~~~L~~~v~ 77 (115)
..+.|.|+|++|++|+..+..+.+||||++.+ ....++|+++++ +.||.|||.|.|.+ .. ....|.|+||
T Consensus 19 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~-t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 97 (141)
T 1v27_A 19 VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKK-TLEPKWNQTFIYSPVHRREFRERMLEITLW 97 (141)
T ss_dssp TTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSS-CSSCCCCCCCEECSCCTTGGGTCEEEEEEE
T ss_pred CCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccC-CCCCccccEEEEccCCHHHhcCCEEEEEEE
Confidence 35789999999999999888889999999998 356889999887 99999999999995 32 2478999999
Q ss_pred eCCCCCC--CceeEEEEEEcchhhccCeeeeEEecccCC
Q 048139 78 NSHTLTP--DEFIGSGRIQLHKALSQGFDDAAWPLQTKT 114 (115)
Q Consensus 78 ~~~~~~~--~~~lG~~~v~l~~l~~~~~~~~~~~L~~~~ 114 (115)
|++..++ +++||++.+++.++...+ ...||+|.+++
T Consensus 98 d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~ 135 (141)
T 1v27_A 98 DQARVREEESEFLGEILIELETALLDD-EPHWYKLQTHD 135 (141)
T ss_dssp EBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCS
T ss_pred ECCCCcCCCCceEEEEEEEccccCCCC-CCceEECcccc
Confidence 9998876 899999999999987655 67888998764
No 25
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.89 E-value=1.9e-22 Score=119.64 Aligned_cols=106 Identities=24% Similarity=0.229 Sum_probs=89.8
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEEC-----CeEEEEEEecCCCCCCeeceeEEEeecC---CCceEEEEEEe
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEYG-----SSKYRTKTCTDGGKNPTFQEKFVLPLIE---GLRELNVVVWN 78 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~-----~~~~~t~~~~~~~~~P~w~e~~~~~~~~---~~~~L~~~v~~ 78 (115)
..+.|.|+|++|++|+..+..+ +||||++.+. ...++|+++++ +.||.|||+|.|.+.. ....|.|+|||
T Consensus 22 ~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 99 (142)
T 2dmg_A 22 QRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKK-TLNPVFDQSFDFSVSLPEVQRRTLDVAVKN 99 (142)
T ss_dssp TTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCS-CSSCEEEEEEEECCCHHHHHHCEEEEEEEE
T ss_pred CCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCC-CCCCCcCceEEEEecHHHhCcCEEEEEEEE
Confidence 3678999999999999988888 9999999984 26789999887 9999999999999843 23589999999
Q ss_pred CCCCCC--CceeEEEEEEcchhhccCeeeeEEecccCC
Q 048139 79 SHTLTP--DEFIGSGRIQLHKALSQGFDDAAWPLQTKT 114 (115)
Q Consensus 79 ~~~~~~--~~~lG~~~v~l~~l~~~~~~~~~~~L~~~~ 114 (115)
++..+. +++||++.+++.++........|+.|.+..
T Consensus 100 ~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~ 137 (142)
T 2dmg_A 100 SGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDS 137 (142)
T ss_dssp CCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSC
T ss_pred CCCccccCCcEEEEEEEecccccccccccceeeccCCC
Confidence 997653 579999999999987766677888888764
No 26
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.89 E-value=2.5e-22 Score=119.11 Aligned_cols=105 Identities=26% Similarity=0.362 Sum_probs=89.3
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEECC-----eEEEEEEecCCCCCCeeceeEEEe-ecCC---CceEEEEEE
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEYGS-----SKYRTKTCTDGGKNPTFQEKFVLP-LIEG---LRELNVVVW 77 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~~-----~~~~t~~~~~~~~~P~w~e~~~~~-~~~~---~~~L~~~v~ 77 (115)
..+.|.|+|++|++|+..+..+.+||||++.+.. ..++|+++++ +.||.|+|.|.|. +... ...|.|+||
T Consensus 27 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 105 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRN-TRNPVWNETLQYHGITEEDMQRKTLRISVC 105 (142)
T ss_dssp GGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCS-CSSCEEEEEEEEESCCHHHHHHCEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCC-CCCCcCcCEEEEcccCHHHccCCEEEEEEE
Confidence 4678999999999999988888999999999864 6899999887 9999999999998 5322 368999999
Q ss_pred eCCCCCCCceeEEEEEEcchhhccCeeeeEEeccc
Q 048139 78 NSHTLTPDEFIGSGRIQLHKALSQGFDDAAWPLQT 112 (115)
Q Consensus 78 ~~~~~~~~~~lG~~~v~l~~l~~~~~~~~~~~L~~ 112 (115)
|++..+++++||++.+++.++..++....|++|..
T Consensus 106 d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 106 DEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred ECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 99988889999999999999987665555557754
No 27
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.88 E-value=7.6e-22 Score=120.68 Aligned_cols=105 Identities=19% Similarity=0.356 Sum_probs=87.8
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEECCeEEEEEEecCCCCCCeeceeEEEeecCCCceEEEEEEeCCCCCCCc
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEYGSSKYRTKTCTDGGKNPTFQEKFVLPLIEGLRELNVVVWNSHTLTPDE 86 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~~~~~~t~~~~~~~~~P~w~e~~~~~~~~~~~~L~~~v~~~~~~~~~~ 86 (115)
..+.|.|+|++|++|+.....+.+||||++.+....++|+++++ +.||.|||+|.|.+.+ ...|.|+|||++..++++
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~-tlnP~Wne~f~f~v~~-~~~L~~~V~D~d~~~~dd 111 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNN-TNSPKWKQPLTVIVTP-VSKLHFRVWSHQTLKSDV 111 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSS-CSSCEEEEEEEEEECT-TCEEEEEEEECCSSSCCE
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCC-CCCCeECCEEEEEeCC-CCEEEEEEEECCCCCCCc
Confidence 56789999999999985444555999999999999999999886 9999999999999964 678999999999888999
Q ss_pred eeEEEEEEcchhhccC--ee---eeEEecccC
Q 048139 87 FIGSGRIQLHKALSQG--FD---DAAWPLQTK 113 (115)
Q Consensus 87 ~lG~~~v~l~~l~~~~--~~---~~~~~L~~~ 113 (115)
+||++.+++.++.... .. ..|+.|..+
T Consensus 112 ~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~ 143 (173)
T 2nq3_A 112 LLGTAALDIYETLKSNNMKLEEVVVTLQLGGD 143 (173)
T ss_dssp EEEEEEEEHHHHHHHTTTEESSEEEEEEEEES
T ss_pred eEEEEEEEHHHhcccCCCCcceeEEEEECccC
Confidence 9999999999997632 11 346677654
No 28
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.88 E-value=3.1e-22 Score=119.37 Aligned_cols=106 Identities=16% Similarity=0.157 Sum_probs=87.7
Q ss_pred cCceEEEEEeeecCCCCC-CC------CCCCCcEEEEEEC---CeEEEEEEecCCCCCCeeceeEEEeecC---CCceEE
Q 048139 7 QGLPLEITVVGCYNLDDK-EW------ISRQDPYVCLEYG---SSKYRTKTCTDGGKNPTFQEKFVLPLIE---GLRELN 73 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~-~~------~~~~~p~~~~~~~---~~~~~t~~~~~~~~~P~w~e~~~~~~~~---~~~~L~ 73 (115)
..+.|.|+|++|++|+.. +. .+.+||||++.+. ...++|+++++ +.||.|||+|.|.+.. ....|.
T Consensus 24 ~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~ 102 (147)
T 2enp_A 24 LHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRK-TQKPVFEERYTFEIPFLEAQRRTLL 102 (147)
T ss_dssp TTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCS-CSSCCCCBCCEECCCHHHHHHSEEE
T ss_pred CCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccC-CCCCeEeeeEEEEeChHHhccCEEE
Confidence 467899999999999873 32 3578999999985 45789999886 9999999999999853 235899
Q ss_pred EEEEeCCCCCCCceeEEEEEEcchhhccCeeeeEEecccC
Q 048139 74 VVVWNSHTLTPDEFIGSGRIQLHKALSQGFDDAAWPLQTK 113 (115)
Q Consensus 74 ~~v~~~~~~~~~~~lG~~~v~l~~l~~~~~~~~~~~L~~~ 113 (115)
|+|||++..+++++||++.+++.++........|+.|.++
T Consensus 103 ~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 142 (147)
T 2enp_A 103 LTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIPS 142 (147)
T ss_dssp EEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBCC
T ss_pred EEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeecC
Confidence 9999999888899999999999999766555556687765
No 29
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.88 E-value=1.1e-21 Score=116.03 Aligned_cols=104 Identities=20% Similarity=0.131 Sum_probs=87.1
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEEC----CeEEEEEEecCCCCCCeeceeEEEeecCC---CceEEEEEEeC
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEYG----SSKYRTKTCTDGGKNPTFQEKFVLPLIEG---LRELNVVVWNS 79 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~----~~~~~t~~~~~~~~~P~w~e~~~~~~~~~---~~~L~~~v~~~ 79 (115)
..+.|.|+|++|++ .+..+.+||||++.+. ...++|+++++ +.||.|||+|.|.+... ...|.|+|||+
T Consensus 24 ~~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~-tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~ 99 (138)
T 1wfm_A 24 QKAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKR-QLHTTWEEGLVLPLAEEELPTATLTLTLRTC 99 (138)
T ss_dssp TTTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCC-CSSEECSSCEEEECCTTSSTTCEEEEEEEEC
T ss_pred CCCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcC-CCCCcCCceEEEEecHHHcCCCEEEEEEEEC
Confidence 46789999999984 4567889999999983 23678999887 99999999999998542 46899999999
Q ss_pred CCCCCCceeEEEEEEcchhhccCeeeeEEecccCC
Q 048139 80 HTLTPDEFIGSGRIQLHKALSQGFDDAAWPLQTKT 114 (115)
Q Consensus 80 ~~~~~~~~lG~~~v~l~~l~~~~~~~~~~~L~~~~ 114 (115)
+..+++++||++.++|.++........|+.|.+..
T Consensus 100 d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 134 (138)
T 1wfm_A 100 DRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSG 134 (138)
T ss_dssp CSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCCS
T ss_pred CCCCCCcEEEEEEEEcccccCcccccceeeCcCCC
Confidence 98889999999999999997656667888987653
No 30
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.87 E-value=3.2e-21 Score=113.64 Aligned_cols=91 Identities=20% Similarity=0.284 Sum_probs=79.8
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEECC-----eEEEEEEecCCCCCCeeceeEEEeecCC---CceEEEEEEe
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEYGS-----SKYRTKTCTDGGKNPTFQEKFVLPLIEG---LRELNVVVWN 78 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~~-----~~~~t~~~~~~~~~P~w~e~~~~~~~~~---~~~L~~~v~~ 78 (115)
..+.|.|+|++|++|+..+..+.+|||+++.+.. ..++|+++.+ +.||.|||+|.|.+... ...|.|+|||
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~-t~nP~wne~f~f~v~~~~l~~~~l~~~V~d 92 (138)
T 3n5a_A 14 SANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKR-NLNPIFNESFAFDIPTEKLRETTIIITVMD 92 (138)
T ss_dssp TTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSS-CSSCEEEEEEEEECCGGGGGGEEEEEEEEE
T ss_pred CCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccC-CCCCcCcceEEEECChhhcCceEEEEEEEE
Confidence 4688999999999999988888999999999863 4788888887 89999999999998543 3679999999
Q ss_pred CCCCCCCceeEEEEEEcchh
Q 048139 79 SHTLTPDEFIGSGRIQLHKA 98 (115)
Q Consensus 79 ~~~~~~~~~lG~~~v~l~~l 98 (115)
++..+++++||++.+++.++
T Consensus 93 ~~~~~~~~~lG~~~i~l~~~ 112 (138)
T 3n5a_A 93 KDKLSRNDVIGKIYLSWKSG 112 (138)
T ss_dssp CCSSSCCEEEEEEEESSSSC
T ss_pred CCCCCCCcEEEEEEEccccC
Confidence 99888999999999999854
No 31
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.87 E-value=5.1e-21 Score=116.19 Aligned_cols=107 Identities=21% Similarity=0.333 Sum_probs=88.0
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEECC-----eEEEEEEecCCCCCCeeceeEEEeecC---CCceEEEEEEe
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEYGS-----SKYRTKTCTDGGKNPTFQEKFVLPLIE---GLRELNVVVWN 78 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~~-----~~~~t~~~~~~~~~P~w~e~~~~~~~~---~~~~L~~~v~~ 78 (115)
..+.|.|+|++|++|+..+..+.+||||++.+.. ..++|+++++ +.||.|||.|.|.+.. ....|.|+|||
T Consensus 35 ~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 113 (166)
T 2cm5_A 35 QQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKK-TLNPEFNEEFFYDIKHSDLAKKSLDISVWD 113 (166)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCS-CSSCEEEEEEEEECCGGGGGGCEEEEEEEE
T ss_pred CCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccC-CCCCcccceEEEEcchHhcCCCEEEEEEEE
Confidence 4678999999999999988888999999999864 6889999887 9999999999999853 24689999999
Q ss_pred CCCCCCCceeEEEEEEcchhh----------c--cCeeeeEEecccCC
Q 048139 79 SHTLTPDEFIGSGRIQLHKAL----------S--QGFDDAAWPLQTKT 114 (115)
Q Consensus 79 ~~~~~~~~~lG~~~v~l~~l~----------~--~~~~~~~~~L~~~~ 114 (115)
++..+++++||++.+++.++. . +.....|..|.+++
T Consensus 114 ~d~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~~~~Wh~L~~~~ 161 (166)
T 2cm5_A 114 YDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQNEN 161 (166)
T ss_dssp CCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCCEEEEEECBC--
T ss_pred CCCCCCCcEEEeEEEecccCCchhHHHHHHHhCCCCcceEeeECCCcc
Confidence 998889999999999998742 1 23345566776643
No 32
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.87 E-value=6.5e-21 Score=114.98 Aligned_cols=106 Identities=19% Similarity=0.209 Sum_probs=88.1
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEECC-----eEEEEEEecCCCCCCeeceeEEEeecCC---CceEEEEEEe
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEYGS-----SKYRTKTCTDGGKNPTFQEKFVLPLIEG---LRELNVVVWN 78 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~~-----~~~~t~~~~~~~~~P~w~e~~~~~~~~~---~~~L~~~v~~ 78 (115)
..+.|.|+|++|++|+..+..+.+||||++.+.. ..++|+++.+ +.||.|+|+|.|.+... ...|.|+|||
T Consensus 23 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~l~i~V~d 101 (159)
T 1tjx_A 23 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKN-TLNPYYNESFSFEVPFEQIQKVQVVVTVLD 101 (159)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCS-CSSCEEEEEEEEECCGGGGGGCEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecC-CCCCcccceEEEEcCHHHhCCcEEEEEEEE
Confidence 4678999999999999988888999999999852 4788888887 99999999999998432 4579999999
Q ss_pred CCCCCCCceeEEEEEEcch----------hhc--cCeeeeEEecccC
Q 048139 79 SHTLTPDEFIGSGRIQLHK----------ALS--QGFDDAAWPLQTK 113 (115)
Q Consensus 79 ~~~~~~~~~lG~~~v~l~~----------l~~--~~~~~~~~~L~~~ 113 (115)
++..+++++||++.+++.. +.. .....+|+.|.+.
T Consensus 102 ~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~~ 148 (159)
T 1tjx_A 102 YDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 148 (159)
T ss_dssp CCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBCH
T ss_pred CCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcCc
Confidence 9988899999999999984 332 2345678888754
No 33
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.86 E-value=1.9e-20 Score=112.23 Aligned_cols=90 Identities=21% Similarity=0.227 Sum_probs=73.8
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEEC--Ce---EEEEEEecCCCCCCeeceeEEEeecCC---CceEEEEEEe
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEYG--SS---KYRTKTCTDGGKNPTFQEKFVLPLIEG---LRELNVVVWN 78 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~--~~---~~~t~~~~~~~~~P~w~e~~~~~~~~~---~~~L~~~v~~ 78 (115)
..+.|.|+|++|++|+..+..+.+||||++.+. .. +++|+++++ +.||.|||+|.|.+... ...|.|+|||
T Consensus 28 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~l~v~V~d 106 (153)
T 1w15_A 28 TTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKC-TPNAVFNELFVFDIPCESLEEISVEFLVLD 106 (153)
T ss_dssp TTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCS-CSSEEEEEEEEEECCSSSSTTEEEEEEEEE
T ss_pred CCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccC-CCCCeecceEEEECCHHHhCceEEEEEEEe
Confidence 457899999999999988888889999999983 32 678999887 99999999999998543 3679999999
Q ss_pred CCCCCCCceeEEEEEEcch
Q 048139 79 SHTLTPDEFIGSGRIQLHK 97 (115)
Q Consensus 79 ~~~~~~~~~lG~~~v~l~~ 97 (115)
++..+++++||++.+++..
T Consensus 107 ~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 107 SERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp CCTTSCCEEEEEEEESTTC
T ss_pred CCCCCCCcEEEEEEECCCC
Confidence 9988899999999999988
No 34
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.85 E-value=6.7e-21 Score=111.76 Aligned_cols=90 Identities=21% Similarity=0.259 Sum_probs=74.0
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEECCeEEEEEEecCCCCCCeeceeEEEeecCCCceEEEEEEeCCCCCCCc
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEYGSSKYRTKTCTDGGKNPTFQEKFVLPLIEGLRELNVVVWNSHTLTPDE 86 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~~~~~~t~~~~~~~~~P~w~e~~~~~~~~~~~~L~~~v~~~~~~~~~~ 86 (115)
..+.|.|+|++|++++. .+.+||||++. ....+|+++.+++.||.|||+|.|.+......|.|+|||++ .++|+
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd 76 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDT 76 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SSCEE
T ss_pred cceEEEEEEEEeECCCC---CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CCCCC
Confidence 34789999999998852 56789999998 23345555443489999999999999766678999999999 88899
Q ss_pred eeEEEEEEcchhhccC
Q 048139 87 FIGSGRIQLHKALSQG 102 (115)
Q Consensus 87 ~lG~~~v~l~~l~~~~ 102 (115)
+||++.+++.++...+
T Consensus 77 ~iG~~~i~l~~l~~~~ 92 (131)
T 2cjt_A 77 MVGTVWIPLRTIRQSN 92 (131)
T ss_dssp EEEEEEEEGGGSCBCS
T ss_pred eEEEEEEEHHHhhhcC
Confidence 9999999999987654
No 35
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.85 E-value=3.8e-20 Score=120.58 Aligned_cols=106 Identities=20% Similarity=0.275 Sum_probs=92.9
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEEC---CeEEEEEEecCCCCCCeeceeEEEeecC---CCceEEEEEEeCC
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEYG---SSKYRTKTCTDGGKNPTFQEKFVLPLIE---GLRELNVVVWNSH 80 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~---~~~~~t~~~~~~~~~P~w~e~~~~~~~~---~~~~L~~~v~~~~ 80 (115)
..+.|.|+|++|++|+..+..+.+||||++.+. ...++|+++.+ +.||.|||+|.|.+.. ....|.|+|||++
T Consensus 17 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~-~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d 95 (284)
T 2r83_A 17 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRK-TLNPVFNEQFTFKVPYSELAGKTLVMAVYDFD 95 (284)
T ss_dssp TTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCS-CSSCEEEEEEEECCCGGGCTTCEEEEEEEECC
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccC-CCCCeeCceEEEEechHHhCcCEEEEEEEECC
Confidence 568999999999999998888899999999985 35788999887 8999999999999843 3478999999999
Q ss_pred CCCCCceeEEEEEEcchhhccCeeeeEEecccC
Q 048139 81 TLTPDEFIGSGRIQLHKALSQGFDDAAWPLQTK 113 (115)
Q Consensus 81 ~~~~~~~lG~~~v~l~~l~~~~~~~~~~~L~~~ 113 (115)
..+++++||++.+++.++..+.....|++|.+.
T Consensus 96 ~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~ 128 (284)
T 2r83_A 96 RFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSA 128 (284)
T ss_dssp SSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCC
T ss_pred CCCCCceeEEEEEcchhcccCCcceeEEEeecc
Confidence 888899999999999999877777788898764
No 36
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.83 E-value=8e-20 Score=127.19 Aligned_cols=108 Identities=19% Similarity=0.267 Sum_probs=92.3
Q ss_pred cccCceEEEEEeeecCCCCCCCCCCCCcEEEEEECCeEEEEEEecCCCCCCeeceeEEEeecC-CCceEEEEEEeCCCCC
Q 048139 5 GIQGLPLEITVVGCYNLDDKEWISRQDPYVCLEYGSSKYRTKTCTDGGKNPTFQEKFVLPLIE-GLRELNVVVWNSHTLT 83 (115)
Q Consensus 5 ~~~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~~~~~~t~~~~~~~~~P~w~e~~~~~~~~-~~~~L~~~v~~~~~~~ 83 (115)
....+.|.|+|++|++|+..+..|.+||||++.++...++|+++.+ +.||.|+|+|.|.+.. ....|.|+|||++..+
T Consensus 383 ~~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~-t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~ 461 (510)
T 3jzy_A 383 TSGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQD-TLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFS 461 (510)
T ss_dssp ---CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSS-CSSCEEEEEEEEEESCTTTCEEEEEEEECCSSS
T ss_pred CCCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCC-CCCCccCceEEEEecCCCCCEEEEEEEeCCCCC
Confidence 3456789999999999999988899999999999999999999887 9999999999999854 4467999999999988
Q ss_pred CCceeEEEEEEcchhhccCe----eeeEEecccC
Q 048139 84 PDEFIGSGRIQLHKALSQGF----DDAAWPLQTK 113 (115)
Q Consensus 84 ~~~~lG~~~v~l~~l~~~~~----~~~~~~L~~~ 113 (115)
++++||++.+++.++..++. ...|++|.+.
T Consensus 462 ~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~ 495 (510)
T 3jzy_A 462 PDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV 495 (510)
T ss_dssp SCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS
T ss_pred CCCceEEEEEEHHHhccccCCCCceeeeecCCCC
Confidence 99999999999999976433 4566777654
No 37
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.83 E-value=8.9e-20 Score=110.90 Aligned_cols=89 Identities=21% Similarity=0.244 Sum_probs=74.0
Q ss_pred CceEEEEEeeecCCCCCCCCCCCCcEEEEEECCeEEEEEEecCCCCCCeeceeEEEeecCCCceEEEEEEeCCCCCCCce
Q 048139 8 GLPLEITVVGCYNLDDKEWISRQDPYVCLEYGSSKYRTKTCTDGGKNPTFQEKFVLPLIEGLRELNVVVWNSHTLTPDEF 87 (115)
Q Consensus 8 ~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~~~~~~t~~~~~~~~~P~w~e~~~~~~~~~~~~L~~~v~~~~~~~~~~~ 87 (115)
.+.|.|+|++|++++ ..+..||||++. ...++|+++..++.||.|||+|.|.+......|.|+|||++ .++|++
T Consensus 13 ~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~ 86 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDG---AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDTM 86 (167)
T ss_dssp CCEEEEEEEEEECSS---CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SSCCEE
T ss_pred eEEEEEEEEEEECCC---CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CCCCce
Confidence 458999999999874 256789999998 33456666543489999999999999766678999999999 888999
Q ss_pred eEEEEEEcchhhccC
Q 048139 88 IGSGRIQLHKALSQG 102 (115)
Q Consensus 88 lG~~~v~l~~l~~~~ 102 (115)
||++.++|.++...+
T Consensus 87 iG~~~i~L~~l~~~~ 101 (167)
T 2cjs_A 87 VGTVWIPLRTIRQSN 101 (167)
T ss_dssp EEEEEEEGGGSCBCS
T ss_pred EEEEEEEHHHhcccC
Confidence 999999999987654
No 38
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.82 E-value=2.5e-19 Score=105.02 Aligned_cols=100 Identities=16% Similarity=0.285 Sum_probs=87.2
Q ss_pred eEEEEEeeecCCCCCCCCCCCCcEEEEEECCeEEEEEEecCCCCCCeeceeEEEeec---CCCceEEEEEEeCCCCCCCc
Q 048139 10 PLEITVVGCYNLDDKEWISRQDPYVCLEYGSSKYRTKTCTDGGKNPTFQEKFVLPLI---EGLRELNVVVWNSHTLTPDE 86 (115)
Q Consensus 10 ~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~~~~~~t~~~~~~~~~P~w~e~~~~~~~---~~~~~L~~~v~~~~~~~~~~ 86 (115)
.|+|.|.+|.+|+ ++.|||+++.+.+.+++|+++.+++.||.|||.|.|.+. .....|.+.|+|++.+++++
T Consensus 22 sL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~nr 96 (144)
T 3l9b_A 22 ALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFSNK 96 (144)
T ss_dssp EEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSCCE
T ss_pred EEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccCCC
Confidence 4889999999998 578999999999999999999744899999999999983 24678999999999999999
Q ss_pred eeEEEEEEcchhhccCeeeeEEecccCC
Q 048139 87 FIGSGRIQLHKALSQGFDDAAWPLQTKT 114 (115)
Q Consensus 87 ~lG~~~v~l~~l~~~~~~~~~~~L~~~~ 114 (115)
+||++.++|.++...+.....-.|.+.+
T Consensus 97 lIG~~~i~Lq~lv~~~~l~l~~~LvD~n 124 (144)
T 3l9b_A 97 LIGTFRMVLQKVVEENRVEVSDTLIDDN 124 (144)
T ss_dssp EEEEEEEESHHHHHHSEEEEEEEEECTT
T ss_pred EEEEEEEEhHHhccCCeEEEeecccCCC
Confidence 9999999999999887666555666654
No 39
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.81 E-value=5.6e-19 Score=123.59 Aligned_cols=98 Identities=21% Similarity=0.370 Sum_probs=85.2
Q ss_pred CceEEEEEeeecCCCCCCCCCCCCcEEEEEECCeEEEEEEecCCCCCCeeceeEEEeec--CCCceEEEEEEeCCCCCCC
Q 048139 8 GLPLEITVVGCYNLDDKEWISRQDPYVCLEYGSSKYRTKTCTDGGKNPTFQEKFVLPLI--EGLRELNVVVWNSHTLTPD 85 (115)
Q Consensus 8 ~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~~~~~~t~~~~~~~~~P~w~e~~~~~~~--~~~~~L~~~v~~~~~~~~~ 85 (115)
.+.|.|+|++|++|+. +..+.+|||+++.+.+..++|+++++ +.||.|||.|.|.+. .....|.|+|||++..++|
T Consensus 393 ~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~-tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~d 470 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWN-NNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDD 470 (540)
T ss_dssp EEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCS-CSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCC
T ss_pred ccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecC-CCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCC
Confidence 4689999999999998 88899999999999988999999987 999999999999862 3567899999999988899
Q ss_pred ceeEEEEEEcchhhccCeeeeEEecc
Q 048139 86 EFIGSGRIQLHKALSQGFDDAAWPLQ 111 (115)
Q Consensus 86 ~~lG~~~v~l~~l~~~~~~~~~~~L~ 111 (115)
++||++.++|.. +....|+.|.
T Consensus 471 D~LG~~~~~L~~----g~~~~~~~l~ 492 (540)
T 3nsj_A 471 DLLGSCDRSPHS----GFHEVTCELN 492 (540)
T ss_dssp EEEEEEEECCCS----EEEEEEEECS
T ss_pred CEEEEEEEEeeC----CcEEEEEEcC
Confidence 999999999873 4455566664
No 40
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.79 E-value=8.6e-19 Score=114.97 Aligned_cols=106 Identities=20% Similarity=0.268 Sum_probs=86.9
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEE---CCeEEEEEEecCCCCCCeeceeEEEeecCC---CceEEEEEEeCC
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEY---GSSKYRTKTCTDGGKNPTFQEKFVLPLIEG---LRELNVVVWNSH 80 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~---~~~~~~t~~~~~~~~~P~w~e~~~~~~~~~---~~~L~~~v~~~~ 80 (115)
..+.|.|+|++|++|+..+..+.+||||++.+ +...++|+++++ +.||.|+|+|.|.+... ...|.|+|||++
T Consensus 18 ~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d 96 (296)
T 1dqv_A 18 GSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRK-TLNPIFNETFQFSVPLAELAQRKLHFSVYDFD 96 (296)
T ss_dssp SSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCS-CSSCEEEEEEEEECCGGGGSSCCCEEEEEECC
T ss_pred CCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCC-CCCCcEeeEEEEEecHHHhcCCEEEEEEEEcC
Confidence 46789999999999999888889999999998 467889999887 99999999999998432 358999999999
Q ss_pred CCCCCceeEEEEEE-cchhhc-cCeeeeEEecccC
Q 048139 81 TLTPDEFIGSGRIQ-LHKALS-QGFDDAAWPLQTK 113 (115)
Q Consensus 81 ~~~~~~~lG~~~v~-l~~l~~-~~~~~~~~~L~~~ 113 (115)
..+++++||++.++ +.++.. ......|+.|...
T Consensus 97 ~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~ 131 (296)
T 1dqv_A 97 RFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEG 131 (296)
T ss_dssp SSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCC
T ss_pred CCCCCceEEEEEeccccccccCCccceeeeccccc
Confidence 88899999999996 555544 2234556777543
No 41
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.79 E-value=4e-18 Score=111.03 Aligned_cols=106 Identities=19% Similarity=0.213 Sum_probs=86.7
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEEC--C---eEEEEEEecCCCCCCeeceeEEEeecCC---CceEEEEEEe
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEYG--S---SKYRTKTCTDGGKNPTFQEKFVLPLIEG---LRELNVVVWN 78 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~--~---~~~~t~~~~~~~~~P~w~e~~~~~~~~~---~~~L~~~v~~ 78 (115)
..+.|.|.|++|++|+..+..+.+|||+++.+. + .+++|+++++ +.||.|||.|.|.+... ...|.|+|||
T Consensus 148 ~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~l~i~V~d 226 (284)
T 2r83_A 148 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKN-TLNPYYNESFSFEVPFEQIQKVQVVVTVLD 226 (284)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCS-CSSCEEEEEEEEECCTTTGGGEEEEEEEEE
T ss_pred cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecC-CCCCEEceeEEEeCCHHHhCceEEEEEEEe
Confidence 356899999999999988888899999999984 2 4678888876 99999999999998543 3479999999
Q ss_pred CCCCCCCceeEEEEEEcchh----------h-c-cCeeeeEEecccC
Q 048139 79 SHTLTPDEFIGSGRIQLHKA----------L-S-QGFDDAAWPLQTK 113 (115)
Q Consensus 79 ~~~~~~~~~lG~~~v~l~~l----------~-~-~~~~~~~~~L~~~ 113 (115)
++..+++++||++.+++..+ . . .....+|+.|.+.
T Consensus 227 ~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 227 YDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp CCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred CCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 99888999999999999753 1 2 2345678888764
No 42
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.78 E-value=6.3e-19 Score=126.79 Aligned_cols=104 Identities=17% Similarity=0.299 Sum_probs=91.5
Q ss_pred cCceEEEEEeeecCCCC---CCCCCCCCcEEEEEEC---CeEEEEEEecCCCCCCeeceeEEEeecC-CCceEEEEEEeC
Q 048139 7 QGLPLEITVVGCYNLDD---KEWISRQDPYVCLEYG---SSKYRTKTCTDGGKNPTFQEKFVLPLIE-GLRELNVVVWNS 79 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~---~~~~~~~~p~~~~~~~---~~~~~t~~~~~~~~~P~w~e~~~~~~~~-~~~~L~~~v~~~ 79 (115)
..+.|.|+|++|++|+. .+..+.+||||++.+. ..+++|+++++ +.||.|||+|.|.+.. ....|.|+|||+
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~-tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNN-DINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTT-CSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcC-CCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 46799999999999988 6777889999999997 46899999887 9999999999999954 567899999999
Q ss_pred CCCCCCceeEEEEEEcchhhccCeeeeEEeccc
Q 048139 80 HTLTPDEFIGSGRIQLHKALSQGFDDAAWPLQT 112 (115)
Q Consensus 80 ~~~~~~~~lG~~~v~l~~l~~~~~~~~~~~L~~ 112 (115)
+..+ +++||++.+++.++..+.....|+.|.+
T Consensus 95 D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~ 126 (749)
T 1cjy_A 95 NYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQ 126 (749)
T ss_dssp CSSS-CEEEEEECCBSTTSCTTCCCCEEEEETT
T ss_pred CCCC-CceeEEEEEEHHHcCCCCceEEEEecCC
Confidence 9888 9999999999999977666777888864
No 43
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.78 E-value=5.1e-18 Score=120.64 Aligned_cols=107 Identities=21% Similarity=0.254 Sum_probs=89.5
Q ss_pred ccCceEEEEEeeecCCCCCCC--CCCCCcEEEEEECC-----eEEEEEEecCCCCCCeeceeEEEeecC-CCceEEEEEE
Q 048139 6 IQGLPLEITVVGCYNLDDKEW--ISRQDPYVCLEYGS-----SKYRTKTCTDGGKNPTFQEKFVLPLIE-GLRELNVVVW 77 (115)
Q Consensus 6 ~~~~~l~v~i~~a~~l~~~~~--~~~~~p~~~~~~~~-----~~~~t~~~~~~~~~P~w~e~~~~~~~~-~~~~L~~~v~ 77 (115)
...+.|.|+|++|++|+..+. .+..||||++.+.+ .+++|+++.+.+.||.|||+|.|.+.. ....|.|+||
T Consensus 494 ~~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~ 573 (624)
T 1djx_A 494 WRPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVE 573 (624)
T ss_dssp CCCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEE
T ss_pred ccceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEE
Confidence 367899999999999998763 57899999999843 688999988734999999999999853 3468999999
Q ss_pred eCCCCCCCceeEEEEEEcchhhccCeeeeEEecccCCC
Q 048139 78 NSHTLTPDEFIGSGRIQLHKALSQGFDDAAWPLQTKTG 115 (115)
Q Consensus 78 ~~~~~~~~~~lG~~~v~l~~l~~~~~~~~~~~L~~~~~ 115 (115)
|++..+++++||++.+++..+..+ ..+++|.+..|
T Consensus 574 D~D~~~~dd~iG~~~ipl~~L~~G---~r~v~L~d~~g 608 (624)
T 1djx_A 574 DYDSSSKNDFIGQSTIPWNSLKQG---YRHVHLLSKNG 608 (624)
T ss_dssp ECCSSSCCEEEEEEEEEGGGBCCE---EEEEEEECTTS
T ss_pred EcCCCCCCceeEEEEEEHHHcCCC---cEEEeCCCCCc
Confidence 999888999999999999998653 34778877654
No 44
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.73 E-value=1.6e-18 Score=113.70 Aligned_cols=92 Identities=24% Similarity=0.283 Sum_probs=80.1
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEEC-----CeEEEEEEecCCCCCCeeceeEEEeecCC---CceEEEEEEe
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEYG-----SSKYRTKTCTDGGKNPTFQEKFVLPLIEG---LRELNVVVWN 78 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~-----~~~~~t~~~~~~~~~P~w~e~~~~~~~~~---~~~L~~~v~~ 78 (115)
..+.|.|.|++|++|+..+..+..|||+++.+. ..+++|+++++ +.||.|||.|.|.+... ...|.|+|||
T Consensus 150 ~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 228 (296)
T 1dqv_A 150 TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKN-TLNPTYNEALVFDVAPESVENVGLSIAVVD 228 (296)
T ss_dssp TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCS-CSSCEEEECCCCCCCSGGGGSCCCCCEEEE
T ss_pred ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecC-CCCCeECceEEEEcCHHHccCcEEEEEEEe
Confidence 357899999999999988888889999999985 25788998886 99999999999998543 3579999999
Q ss_pred CCCCCCCceeEEEEEEcchhh
Q 048139 79 SHTLTPDEFIGSGRIQLHKAL 99 (115)
Q Consensus 79 ~~~~~~~~~lG~~~v~l~~l~ 99 (115)
++..+++++||.+.+++..+.
T Consensus 229 ~d~~~~~~~iG~~~i~l~~~~ 249 (296)
T 1dqv_A 229 YDCIGHNEVIGVCRVGPEAAD 249 (296)
T ss_dssp CCSSSCCEEEEECCCSSCTTC
T ss_pred CCCCCCCceEEEEEECCccCC
Confidence 999889999999999998763
No 45
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.71 E-value=6.8e-17 Score=115.90 Aligned_cols=105 Identities=29% Similarity=0.393 Sum_probs=91.3
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEE-----CCeEEEEEEecCCCCCCeeceeEEEeecC--CCceEEEEEEeC
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEY-----GSSKYRTKTCTDGGKNPTFQEKFVLPLIE--GLRELNVVVWNS 79 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~-----~~~~~~t~~~~~~~~~P~w~e~~~~~~~~--~~~~L~~~v~~~ 79 (115)
..+.|.|++.+|++|...+..+..|||+++.+ ...+++|+++++ +.||.|||.|.|.+.. ....|.++|||+
T Consensus 170 ~~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~-tlnP~wne~f~f~~~~~~~~~~L~v~v~d~ 248 (674)
T 3pfq_A 170 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKS-SLNPEWNETFRFQLKESDKDRRLSVEIWDW 248 (674)
T ss_dssp CSSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSS-CSSCEEEEEEEEECCSTTTTCEEEEEEEEC
T ss_pred ccceeeeeeecccccCCCCcccccCcccccccccCcccccccccccccc-ccCCCccceeeeecccCCccceeeeEEeec
Confidence 45789999999999999999999999999998 345789999887 9999999999999843 345799999999
Q ss_pred CCCCCCceeEEEEEEcchhhccCeeeeEEecccC
Q 048139 80 HTLTPDEFIGSGRIQLHKALSQGFDDAAWPLQTK 113 (115)
Q Consensus 80 ~~~~~~~~lG~~~v~l~~l~~~~~~~~~~~L~~~ 113 (115)
+..+++++||.+.+++.++...+. ..|+.|.+.
T Consensus 249 d~~~~dd~iG~~~i~l~~l~~~~~-~~w~~Lls~ 281 (674)
T 3pfq_A 249 DLTSRNDFMGSLSFGISELQKAGV-DGWFKLLSQ 281 (674)
T ss_dssp CSSSCCEECCBCCCBTTHHHHCCE-EEEEECBCT
T ss_pred ccccccccccccccchhhhccCCc-ccceeeccc
Confidence 999999999999999999987654 778877654
No 46
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.67 E-value=3.4e-18 Score=118.68 Aligned_cols=99 Identities=14% Similarity=0.232 Sum_probs=13.6
Q ss_pred CceEEEEEeeecCCCCCCCCCCCCcEEEEEECCe-EEEEEEecCCC---CCCeeceeEEEeecCCCceEEEEEEeC-C--
Q 048139 8 GLPLEITVVGCYNLDDKEWISRQDPYVCLEYGSS-KYRTKTCTDGG---KNPTFQEKFVLPLIEGLRELNVVVWNS-H-- 80 (115)
Q Consensus 8 ~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~~~-~~~t~~~~~~~---~~P~w~e~~~~~~~~~~~~L~~~v~~~-~-- 80 (115)
.+.|+|+|++|++|+..+ ||||.+.+++. ..+|+++++ + .||.|||+|.|.+.+....|.++|||. +
T Consensus 10 ~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~k-t~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~~ 83 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPR-SASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDKK 83 (483)
T ss_dssp EECC---------------------------------------------------CCEECC-------------------
T ss_pred ccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeC-CCCCCCCccccEEEEecCCCccEEEEEEEecCCcc
Confidence 468999999999998765 89999998765 568888776 7 999999999999744457899999994 3
Q ss_pred -CCCCCceeEEEEEEcchhhccCeeeeEEeccc
Q 048139 81 -TLTPDEFIGSGRIQLHKALSQGFDDAAWPLQT 112 (115)
Q Consensus 81 -~~~~~~~lG~~~v~l~~l~~~~~~~~~~~L~~ 112 (115)
..+++++||++.+++.++..+.....||+|.+
T Consensus 84 ~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~ 116 (483)
T 3bxj_A 84 RKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTL 116 (483)
T ss_dssp -----------------------CCEECC----
T ss_pred ccCCCCceEEEEEEEHHHhcCCCCCCeEEECCC
Confidence 25689999999999999987777778888854
No 47
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.58 E-value=2.1e-14 Score=104.47 Aligned_cols=98 Identities=27% Similarity=0.495 Sum_probs=78.7
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEECC-------eEEEEEEecCCCCCCeecee-EEEe-ec-CCCceEEEEE
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEYGS-------SKYRTKTCTDGGKNPTFQEK-FVLP-LI-EGLRELNVVV 76 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~~-------~~~~t~~~~~~~~~P~w~e~-~~~~-~~-~~~~~L~~~v 76 (115)
..+.|.|+|++|++|+.. ..||||++.+.+ .+++|+++.+++.||.|||+ |.|. +. +....|.|+|
T Consensus 648 ~~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V 723 (816)
T 3qr0_A 648 VAGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIV 723 (816)
T ss_dssp CCEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEE
T ss_pred cceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEE
Confidence 357899999999999753 579999999853 57899998865799999998 9998 63 4456899999
Q ss_pred EeCCCCCCCceeEEEEEEcchhhccCeeeeEEecccCCC
Q 048139 77 WNSHTLTPDEFIGSGRIQLHKALSQGFDDAAWPLQTKTG 115 (115)
Q Consensus 77 ~~~~~~~~~~~lG~~~v~l~~l~~~~~~~~~~~L~~~~~ 115 (115)
||++ ++++|++.+||..|.. |. .+.+|.+..|
T Consensus 724 ~D~d----ddfiG~~~ipL~~L~~-Gy--R~vpL~~~~g 755 (816)
T 3qr0_A 724 SEEN----GKFIGHRVMPLDGIKP-GY--RHVPLRNESN 755 (816)
T ss_dssp EETT----SCEEEEEEEESTTCCC-EE--EEEEEECTTS
T ss_pred EecC----CCeeeEEEEEHHHcCC-cc--eEEEEeCCCC
Confidence 9974 7899999999999865 33 3467777654
No 48
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.55 E-value=2.6e-14 Score=104.55 Aligned_cols=98 Identities=23% Similarity=0.416 Sum_probs=77.7
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEECC------eEEEEEEecCCCCCCeece-eEEEe-e-cCCCceEEEEEE
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEYGS------SKYRTKTCTDGGKNPTFQE-KFVLP-L-IEGLRELNVVVW 77 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~~------~~~~t~~~~~~~~~P~w~e-~~~~~-~-~~~~~~L~~~v~ 77 (115)
....|.|+|++|++|+.. ..||||++.+.+ .+++|+++.+++.||.||| .|.|. + .+....|.|+||
T Consensus 723 ~~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~ 798 (885)
T 3ohm_B 723 VANALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAF 798 (885)
T ss_dssp CCEEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred cceEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEE
Confidence 345899999999999753 579999999853 2578999876579999999 69998 6 344568999999
Q ss_pred eCCCCCCCceeEEEEEEcchhhccCeeeeEEecccCCC
Q 048139 78 NSHTLTPDEFIGSGRIQLHKALSQGFDDAAWPLQTKTG 115 (115)
Q Consensus 78 ~~~~~~~~~~lG~~~v~l~~l~~~~~~~~~~~L~~~~~ 115 (115)
|++ ++++|++.+||..|.. |. .+.+|.+..|
T Consensus 799 D~d----ddfiG~~~lpL~~L~~-Gy--R~vpL~~~~g 829 (885)
T 3ohm_B 799 EEG----GKFVGHRILPVSAIRS-GY--HYVCLRNEAN 829 (885)
T ss_dssp ETT----TEEEEEEEEETTTCCC-EE--EEEEEECTTS
T ss_pred cCC----ccEEeeEEEEHHHcCC-Cc--eEEEecCCCC
Confidence 986 7899999999999864 33 3467776654
No 49
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.55 E-value=5.3e-14 Score=102.42 Aligned_cols=99 Identities=27% Similarity=0.418 Sum_probs=78.0
Q ss_pred ccCceEEEEEeeecCCCCCCCCCCCCcEEEEEECC------eEEEEE-EecCCCCCCeece-eEEE-eec-CCCceEEEE
Q 048139 6 IQGLPLEITVVGCYNLDDKEWISRQDPYVCLEYGS------SKYRTK-TCTDGGKNPTFQE-KFVL-PLI-EGLRELNVV 75 (115)
Q Consensus 6 ~~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~~------~~~~t~-~~~~~~~~P~w~e-~~~~-~~~-~~~~~L~~~ 75 (115)
...+.|.|+|++|++|+. +..||||++.+.+ .+++|+ ++.+++.||.||| .|.| .+. +....|.|+
T Consensus 675 ~~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~ 750 (799)
T 2zkm_X 675 VVATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVA 750 (799)
T ss_dssp TTCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEE
T ss_pred eeeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEE
Confidence 346789999999999985 3689999999842 367899 7776579999999 6999 773 445589999
Q ss_pred EEeCCCCCCCceeEEEEEEcchhhccCeeeeEEecccCCC
Q 048139 76 VWNSHTLTPDEFIGSGRIQLHKALSQGFDDAAWPLQTKTG 115 (115)
Q Consensus 76 v~~~~~~~~~~~lG~~~v~l~~l~~~~~~~~~~~L~~~~~ 115 (115)
|||++ ++++|++.+|+..+.. | -.+++|.+..|
T Consensus 751 V~D~d----~d~iG~~~ipl~~L~~-G--~r~v~L~~~~g 783 (799)
T 2zkm_X 751 VMEEG----NKFLGHRIIPINALNS-G--YHHLCLHSESN 783 (799)
T ss_dssp EEETT----TEEEEEEEEEGGGBCC-E--EEEEEEECTTC
T ss_pred EEEeC----CCccceEeeehhhcCC-C--cEEEeccCCCC
Confidence 99986 7899999999999864 2 34567766554
No 50
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.19 E-value=2.8e-09 Score=60.98 Aligned_cols=100 Identities=14% Similarity=0.119 Sum_probs=70.3
Q ss_pred CceEEEEEeeecCCCCCCCCCCCCcEEEEEECCeE----EEEEEecCCCCCCeeceeEEEeecCCCceEEEEEEeCCCCC
Q 048139 8 GLPLEITVVGCYNLDDKEWISRQDPYVCLEYGSSK----YRTKTCTDGGKNPTFQEKFVLPLIEGLRELNVVVWNSHTLT 83 (115)
Q Consensus 8 ~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~~~~----~~t~~~~~~~~~P~w~e~~~~~~~~~~~~L~~~v~~~~~~~ 83 (115)
...|+|.+.++.--.-.......||||.+.+.... .+|-+.+..+..|.|++.|...+.++ +.|.+.|+....
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~G-r~l~i~Vfh~a~-- 81 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYEG-RVIQIVLMRAAE-- 81 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCTT-CEEEEEEEEETT--
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeCC-EEEEEEEEcCCC--
Confidence 45688888765321111112247999999886432 23324455599999999999998755 799999997653
Q ss_pred CCceeEEEEEEcchhhc-----cCeeeeEEeccc
Q 048139 84 PDEFIGSGRIQLHKALS-----QGFDDAAWPLQT 112 (115)
Q Consensus 84 ~~~~lG~~~v~l~~l~~-----~~~~~~~~~L~~ 112 (115)
+|++.+++++.+|.. ++..+.|..|.+
T Consensus 82 --~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP 113 (126)
T 1yrk_A 82 --EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP 113 (126)
T ss_dssp --EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS
T ss_pred --CeeeEEEEEHHHHHhhhccCCCceEEEEeccc
Confidence 899999999999984 345566778865
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=99.13 E-value=3.3e-09 Score=61.46 Aligned_cols=102 Identities=13% Similarity=0.104 Sum_probs=70.8
Q ss_pred ccCceEEEEEeeecCCCCCC-CCCCCCcEEEEEECCeE----EEEEEecCCCCCCeeceeEEEeecCCCceEEEEEEeCC
Q 048139 6 IQGLPLEITVVGCYNLDDKE-WISRQDPYVCLEYGSSK----YRTKTCTDGGKNPTFQEKFVLPLIEGLRELNVVVWNSH 80 (115)
Q Consensus 6 ~~~~~l~v~i~~a~~l~~~~-~~~~~~p~~~~~~~~~~----~~t~~~~~~~~~P~w~e~~~~~~~~~~~~L~~~v~~~~ 80 (115)
-....|+|.+.+..--+-.. .....||||.+.+.... .+|-+.+..+..|.|++.|...+.++ +.|.|.|+...
T Consensus 7 ~m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~G-r~l~i~Vfh~a 85 (138)
T 2enj_A 7 GMSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINKG-RVMQIIVKGKN 85 (138)
T ss_dssp SCCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCSS-CEEEEEEECSS
T ss_pred ccCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEECC-eEEEEEEEcCC
Confidence 34567889887764322111 12247999999886432 33312233488999999999998754 79999999655
Q ss_pred CCCCCceeEEEEEEcchhhc-----cCeeeeEEeccc
Q 048139 81 TLTPDEFIGSGRIQLHKALS-----QGFDDAAWPLQT 112 (115)
Q Consensus 81 ~~~~~~~lG~~~v~l~~l~~-----~~~~~~~~~L~~ 112 (115)
. +|++.++|++.+|.. ++..+.|..|.+
T Consensus 86 ~----~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP 118 (138)
T 2enj_A 86 V----DLISETTVELYSLAERCRKNNGKTEIWLELKP 118 (138)
T ss_dssp C----SCCEEEEEESHHHHHHHHHTTTCEEEEEECBS
T ss_pred C----CeeeEEEEEHHHHHhhhccCCCceEEEEeccc
Confidence 3 799999999999984 345566778865
No 52
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=96.64 E-value=0.054 Score=33.97 Aligned_cols=93 Identities=12% Similarity=0.105 Sum_probs=55.0
Q ss_pred cccccCceEEEEEeeecCCCCCCCCCCCCcEEEEEEC-------------------CeEEEEEEecCCCCCCeeceeEEE
Q 048139 3 ISGIQGLPLEITVVGCYNLDDKEWISRQDPYVCLEYG-------------------SSKYRTKTCTDGGKNPTFQEKFVL 63 (115)
Q Consensus 3 ~~~~~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~-------------------~~~~~t~~~~~~~~~P~w~e~~~~ 63 (115)
|++...+.|.|++.++.--... .....+.-+.+.+. ...++|.+... ..+|.|+|++.+
T Consensus 21 ~Pgd~RNdLYVtl~~g~F~~~~-k~~aRNIeV~vevr~~~G~~i~~~I~~~sg~~~~se~~S~V~YH-nk~P~w~EtIKi 98 (220)
T 3l4c_A 21 MPGDVRNDIYVTLVQGDFDKGS-KTTAKNVEVTVSVYDEDGKRLEHVIFPGAGDEAISEYKSVIYYQ-VKQPRWFETVKV 98 (220)
T ss_dssp -----CEEEEEEEEEEECCCSS-SSSCCCEEEEEEEEETTSCBCCSCEECTTCCSCBSCEECCCCTT-CSSCCCCEEEEE
T ss_pred cCCCCcccEEEEeeEeEECCCC-CCCcceEEEEEEEEcCCCCCcccCEEcCCCCCCceeEEEEEEEc-CCCCCceEeEEE
Confidence 4556777888998887422211 11122333433331 12566666655 789999999999
Q ss_pred eecC---CCceEEEEEEeCCCC----CCCceeEEEEEEcch
Q 048139 64 PLIE---GLRELNVVVWNSHTL----TPDEFIGSGRIQLHK 97 (115)
Q Consensus 64 ~~~~---~~~~L~~~v~~~~~~----~~~~~lG~~~v~l~~ 97 (115)
.++. ...-|.|+++....- ..+..+|.+.+||.+
T Consensus 99 ~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 99 AIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp EECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred eeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 9854 345788998765421 223478999999864
No 53
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=96.40 E-value=0.063 Score=31.89 Aligned_cols=106 Identities=13% Similarity=0.066 Sum_probs=68.8
Q ss_pred ccCceEEEEEeeecCCCCC-CCCCCCCcEEEEEEC---CeEEEEEEecCCCCCCeeceeEEEeecCC--------CceEE
Q 048139 6 IQGLPLEITVVGCYNLDDK-EWISRQDPYVCLEYG---SSKYRTKTCTDGGKNPTFQEKFVLPLIEG--------LRELN 73 (115)
Q Consensus 6 ~~~~~l~v~i~~a~~l~~~-~~~~~~~p~~~~~~~---~~~~~t~~~~~~~~~P~w~e~~~~~~~~~--------~~~L~ 73 (115)
...+.++|.|.++.--+.. ...+..+|...+.+. -+.+.|.+.. +.+|.+|-+..+.+... ...+.
T Consensus 15 ~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~--G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~ 92 (156)
T 2yrb_A 15 RGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR--GLHPEYNFTSQYLVHVNDLFLQYIQKNTIT 92 (156)
T ss_dssp SSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE--SSSCCCCEEEEEEECCSHHHHHHHHHCCEE
T ss_pred CCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc--CCCCCcceEEEEEEEeCHHHHHHHhcCCEE
Confidence 3567888888887421110 112234565544443 4577777765 78999998888887332 25788
Q ss_pred EEEEeCCCCCCCceeEEEEEEcchhhccCe-eeeEEecccCC
Q 048139 74 VVVWNSHTLTPDEFIGSGRIQLHKALSQGF-DDAAWPLQTKT 114 (115)
Q Consensus 74 ~~v~~~~~~~~~~~lG~~~v~l~~l~~~~~-~~~~~~L~~~~ 114 (115)
++++... ....+.+|++.+++.+++..+. .....+|.+..
T Consensus 93 lELhqa~-g~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~ 133 (156)
T 2yrb_A 93 LEVHQAY-STEYETIAACQLKFHEILEKSGRIFCTASLIGTK 133 (156)
T ss_dssp EEEEEEC-SSCEEEEEEEEECCSHHHHCCSCEEEEEEECBSS
T ss_pred EEEEEee-CCCceEEEEEEEEhHHhhCcCCceEEEEEEEcCC
Confidence 8888865 3356799999999999986533 44444665544
No 54
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=95.69 E-value=0.14 Score=38.78 Aligned_cols=90 Identities=11% Similarity=0.188 Sum_probs=58.6
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEEEE--CCe----EEEEEEecCCCCCCeeceeEEEee----cCCCceEEEEE
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCLEY--GSS----KYRTKTCTDGGKNPTFQEKFVLPL----IEGLRELNVVV 76 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~--~~~----~~~t~~~~~~~~~P~w~e~~~~~~----~~~~~~L~~~v 76 (115)
-...+.|+|..+.++... ...+.|+.+.+ ++. ...|....- ..+|.|||.+.|.+ -+....|.++|
T Consensus 215 ~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~-~~~~~Wne~l~f~i~i~dLPr~a~L~~ti 290 (940)
T 2wxf_A 215 LEQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNV-CSEPVWKQRLEFDISVCDLPRMARLCFAL 290 (940)
T ss_dssp CCSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEES-CSSCEEEEEEEEEEEGGGCCTTCEEEEEE
T ss_pred cCCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccC-CCCcccceEEEcccccccCCcccEEEEEE
Confidence 346789999999887533 23455666554 332 334444333 66899999999987 25678899999
Q ss_pred EeCCCC--C----------CCceeEEEEEEcchhhc
Q 048139 77 WNSHTL--T----------PDEFIGSGRIQLHKALS 100 (115)
Q Consensus 77 ~~~~~~--~----------~~~~lG~~~v~l~~l~~ 100 (115)
|+.... + .+..+|-+.+++-+...
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~ 326 (940)
T 2wxf_A 291 YAVVEKAKKARSTKKKSKKADCPIAWANLMLFDYKD 326 (940)
T ss_dssp EEEC----------------CEEEEEEEEESBCTTS
T ss_pred EEecCCccCccccccccccccceEEEEeeeEECCcC
Confidence 985321 1 24489999999887543
No 55
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=94.92 E-value=0.49 Score=36.43 Aligned_cols=92 Identities=13% Similarity=0.125 Sum_probs=60.0
Q ss_pred ccCceEEEEEeeecCCCCCCCCCCCCcEEEEEEC--C----eEEEEEEecCCCCCCeeceeEEEee----cCCCceEEEE
Q 048139 6 IQGLPLEITVVGCYNLDDKEWISRQDPYVCLEYG--S----SKYRTKTCTDGGKNPTFQEKFVLPL----IEGLRELNVV 75 (115)
Q Consensus 6 ~~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~~--~----~~~~t~~~~~~~~~P~w~e~~~~~~----~~~~~~L~~~ 75 (115)
.-...+.|+|..+.++.. ......+.|+.+.+. + ....|+... ..+|.|||.+.|.+ -+....|.++
T Consensus 352 ~~~~~f~v~i~~~~~~n~-~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~--~~~~~Wne~l~f~i~i~dLPr~arL~~t 428 (1091)
T 3hhm_A 352 VINSALRIKILCATYVNV-NIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP--CSNPRWNEWLNYDIYIPDLPRAARLCLS 428 (1091)
T ss_dssp GCCSEEEEEEEEESCCCC-CCSSCCCCCEEEEEESSSCSSCCEECCCCCC--TTSCEEEEEEEEEEEGGGCCTTCEEEEE
T ss_pred hCCCCEEEEEEEecCCCC-CccccceEEEEEEEEECCEEccCceeccccC--CCCCCCCeeEEecCccccCChhcEEEEE
Confidence 345678999999877742 222234567777663 2 234444332 45778999999997 2567899999
Q ss_pred EEeCCCC----CCCceeEEEEEEcchhhc
Q 048139 76 VWNSHTL----TPDEFIGSGRIQLHKALS 100 (115)
Q Consensus 76 v~~~~~~----~~~~~lG~~~v~l~~l~~ 100 (115)
||+.... ..+..+|-+.+++-+...
T Consensus 429 l~~~~~~~~~~~~~~~lg~~n~~lfd~~~ 457 (1091)
T 3hhm_A 429 ICSVKGRKGAKEEHCPLAWGNINLFDYTD 457 (1091)
T ss_dssp ECCCCCCC-------CCEEEEEESBCTTC
T ss_pred EEEecCccCcccccceeEEeeeeeEccCC
Confidence 9986532 124579999999887643
No 56
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=92.01 E-value=2 Score=32.77 Aligned_cols=91 Identities=9% Similarity=-0.008 Sum_probs=53.2
Q ss_pred CceEEEEEeeecCCCCCCCCCCCCcEEEEEE--CCeE---EEEEEecCCCCCCeeceeEEEee----cCCCceEEEEEEe
Q 048139 8 GLPLEITVVGCYNLDDKEWISRQDPYVCLEY--GSSK---YRTKTCTDGGKNPTFQEKFVLPL----IEGLRELNVVVWN 78 (115)
Q Consensus 8 ~~~l~v~i~~a~~l~~~~~~~~~~p~~~~~~--~~~~---~~t~~~~~~~~~P~w~e~~~~~~----~~~~~~L~~~v~~ 78 (115)
...+.|.|..+...... .....+.|+.+.+ +... ..|....- +.+|.|||.+.|.+ -+....|.++||+
T Consensus 217 ~~~f~i~i~~~~~~~~~-~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~-~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 294 (961)
T 1e7u_A 217 DRKFRVKIRGIDIPVLP-RTADLTVFVEANIQYGQQVLCQRRTSPKPF-TEEVLWNVWLEFSIKIKDLPKGALLNLQIYC 294 (961)
T ss_dssp CSEEEEEEEEEECSSCC-TTSCEEEEEEEEEEETTEEEEEEECCCEEC-CSEEEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred cCceEEEEeeccccccc-CCCCceEEEEEEEEECCEEcccceeecccc-CCCcccceeEEeccccccCCcccEEEEEEEe
Confidence 35678888876531111 1122345665543 3332 22333322 55799999999987 2567889999997
Q ss_pred CCCC----------------CCCceeEEEEEEcchhhc
Q 048139 79 SHTL----------------TPDEFIGSGRIQLHKALS 100 (115)
Q Consensus 79 ~~~~----------------~~~~~lG~~~v~l~~l~~ 100 (115)
.... +....+|-+.+++-+...
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~~ 332 (961)
T 1e7u_A 295 GAKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHRF 332 (961)
T ss_dssp EEC--------------------CEEEEEEEESBCTTS
T ss_pred cccCccccccccccccccccccceeEEEEeeeeecCCC
Confidence 4211 124478999999877643
No 57
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=91.27 E-value=0.27 Score=37.84 Aligned_cols=89 Identities=11% Similarity=0.111 Sum_probs=54.1
Q ss_pred cCceEEEEEeeecCCCCCCCCCCCCcEEEE--EECCe----EEEEEEecCCCCCCeeceeEEEee----cCCCceEEEEE
Q 048139 7 QGLPLEITVVGCYNLDDKEWISRQDPYVCL--EYGSS----KYRTKTCTDGGKNPTFQEKFVLPL----IEGLRELNVVV 76 (115)
Q Consensus 7 ~~~~l~v~i~~a~~l~~~~~~~~~~p~~~~--~~~~~----~~~t~~~~~~~~~P~w~e~~~~~~----~~~~~~L~~~v 76 (115)
-...+.|+|..+.++... ...+.|+.+ ..++. ...|....- +.+|.|||.+.|.+ -+....|.++|
T Consensus 351 ~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~-~~~~~Wnewl~f~i~~~dLPr~a~L~~ti 426 (1092)
T 2y3a_A 351 NNNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISG-KNDHIWNEQLEFDINICDLPRMARLCFAV 426 (1092)
T ss_dssp CCSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCS-SSCCCCCEEEEEEEESSSCCTTCEEEEEC
T ss_pred cCCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccC-CCCCccceeEEeCCccccCChhcEEEEEE
Confidence 346788999988877533 233445443 33433 233433332 56899999999987 24567899999
Q ss_pred EeCCCC----------------------CCCceeEEEEEEcchhh
Q 048139 77 WNSHTL----------------------TPDEFIGSGRIQLHKAL 99 (115)
Q Consensus 77 ~~~~~~----------------------~~~~~lG~~~v~l~~l~ 99 (115)
|+.... ..+..+|-+.+++-+..
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 471 (1092)
T 2y3a_A 427 YAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFK 471 (1092)
T ss_dssp CCC------------------------------CCEEEEESBCTT
T ss_pred EEecCccccccccccccccccccccccccccceeEEEeeeeECCc
Confidence 985210 11237889999887753
No 58
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=26.35 E-value=1.2e+02 Score=18.71 Aligned_cols=49 Identities=12% Similarity=0.144 Sum_probs=31.2
Q ss_pred EEEecCCCCCCeeceeEEEee-cCCCceEEEEEEeCCC--CCCCceeEEEEEE
Q 048139 45 TKTCTDGGKNPTFQEKFVLPL-IEGLRELNVVVWNSHT--LTPDEFIGSGRIQ 94 (115)
Q Consensus 45 t~~~~~~~~~P~w~e~~~~~~-~~~~~~L~~~v~~~~~--~~~~~~lG~~~v~ 94 (115)
+.++..++.-|.= .+..|.- .+.+..+.|.||.-.. ...+.+||...+.
T Consensus 21 ~~lI~rnt~iP~~-k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~ 72 (219)
T 4e81_A 21 TTLIAKNTTIPTK-HSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLD 72 (219)
T ss_dssp EEEECTTCBSSEE-EEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEE
T ss_pred EEEEeCcCcccEe-EEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEe
Confidence 4555655666763 4445544 4567788999988542 2346689987774
No 59
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=25.26 E-value=92 Score=17.31 Aligned_cols=38 Identities=29% Similarity=0.279 Sum_probs=26.6
Q ss_pred eceeEEEeecCCCceEEEEEEeCCCCCCCceeEEEEEEcchhh
Q 048139 57 FQEKFVLPLIEGLRELNVVVWNSHTLTPDEFIGSGRIQLHKAL 99 (115)
Q Consensus 57 w~e~~~~~~~~~~~~L~~~v~~~~~~~~~~~lG~~~v~l~~l~ 99 (115)
++..+.|.+......+.|+|.|... ++.|-+ +|...++
T Consensus 54 ~n~~L~F~vdee~~~~vVkVvD~~T---gEVIRq--IPpEe~L 91 (117)
T 2hc5_A 54 SQVHLKFELHDKLNEYYVKVIEDST---NEVIRE--IPPKRWL 91 (117)
T ss_dssp SSCCEEEEEEEETTEEEEEEEETTT---TEEEEE--ECHHHHH
T ss_pred cCCceEEEEecCCCcEEEEEEECCC---CcEEEe--CChHHHH
Confidence 4566888887666789999999773 556655 6655543
No 60
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=23.82 E-value=1.1e+02 Score=17.56 Aligned_cols=49 Identities=10% Similarity=0.196 Sum_probs=29.8
Q ss_pred EEEecCCCCCCeeceeEEEee-cCCCceEEEEEEeCCC--CCCCceeEEEEEE
Q 048139 45 TKTCTDGGKNPTFQEKFVLPL-IEGLRELNVVVWNSHT--LTPDEFIGSGRIQ 94 (115)
Q Consensus 45 t~~~~~~~~~P~w~e~~~~~~-~~~~~~L~~~v~~~~~--~~~~~~lG~~~v~ 94 (115)
+.++..++.-|.= ....|.- .+.+..+.+.||.... ...+.+||...+.
T Consensus 20 ~~lI~rnt~iP~~-k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~ 71 (152)
T 3h0x_A 20 TPLIKRNTAIPTK-KSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELT 71 (152)
T ss_dssp EEEECTTCBSSEE-EEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEEC
T ss_pred EEEEECcCccCEE-EEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEe
Confidence 4455554556653 4445553 4556778888988542 2346688987775
No 61
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=22.89 E-value=1.2e+02 Score=17.50 Aligned_cols=49 Identities=10% Similarity=0.137 Sum_probs=30.6
Q ss_pred EEEecCCCCCCeeceeEEEee-cCCCceEEEEEEeCCC--CCCCceeEEEEEE
Q 048139 45 TKTCTDGGKNPTFQEKFVLPL-IEGLRELNVVVWNSHT--LTPDEFIGSGRIQ 94 (115)
Q Consensus 45 t~~~~~~~~~P~w~e~~~~~~-~~~~~~L~~~v~~~~~--~~~~~~lG~~~v~ 94 (115)
+.++..++.-|.= ....|.- .+.+..+.+.||.... ...+.+||...+.
T Consensus 20 ~~lI~rnt~iP~~-k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~ 71 (152)
T 3dob_A 20 TNLIDRNTRIPTK-ACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELS 71 (152)
T ss_dssp EEEECTTCBSSEE-EEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEE
T ss_pred EEEEECcCccCEE-EEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEe
Confidence 4455554666653 4455554 4566788899988442 2346689987775
No 62
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=20.42 E-value=1.5e+02 Score=17.72 Aligned_cols=49 Identities=16% Similarity=0.264 Sum_probs=31.0
Q ss_pred EEEecCCCCCCeeceeEEEee-cCCCceEEEEEEeCCC--CCCCceeEEEEEE
Q 048139 45 TKTCTDGGKNPTFQEKFVLPL-IEGLRELNVVVWNSHT--LTPDEFIGSGRIQ 94 (115)
Q Consensus 45 t~~~~~~~~~P~w~e~~~~~~-~~~~~~L~~~v~~~~~--~~~~~~lG~~~v~ 94 (115)
+.++..++.-|. .....|.- .+.+..+.|.||.-.. ...+.+||...+.
T Consensus 40 ~~lI~rnt~iP~-~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~ 91 (182)
T 3n8e_A 40 TKLINRNTTIPT-KKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLI 91 (182)
T ss_dssp EEEECTTCBSSE-EEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEEC
T ss_pred EEEEeCCCccCE-EEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEc
Confidence 455555466676 34455553 4566779999998542 2346689987774
Done!