BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048140
(334 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84WN0|Y4920_ARATH Uncharacterized protein At4g37920, chloroplastic OS=Arabidopsis
thaliana GN=At4g37920 PE=1 SV=2
Length = 427
Score = 308 bits (788), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 143/309 (46%), Positives = 218/309 (70%), Gaps = 1/309 (0%)
Query: 20 MIQVCDKLIEVFMVDKPTPTDWRRLLVFSKEWNNLRSNFFKRCQDRADAEVDPEMKHKLL 79
M Q CDK+I++F+ +KP W+ LV EWN NF+KRC+ RAD E DP +K KL+
Sbjct: 83 MAQFCDKIIDLFLNEKPKVKQWKTYLVLRDEWNKYSVNFYKRCRIRADTETDPILKQKLV 142
Query: 80 RLGRKLKEIDEDVQSHNELLEVIEAAPSEVSQIVSRRCKDFTQEFFEHLHTVAESYYNDP 139
L K+K+ID++++ HN+LL+ I+ P++++ I ++R +DFT EFF ++ ++E+ +
Sbjct: 143 SLESKVKKIDKEMEKHNDLLKEIQENPTDINAIAAKRRRDFTGEFFRYVTLLSETL-DGL 201
Query: 140 AKQDDIAKLGKLCVAAVQAYDTTTESIEALNAAELKFQDIINSPSVDAACRKIDSLAEKN 199
+D +A+L C++AV AYD T ES+E L+ A+ KF+DI+NSPSVD+AC KI SLA+
Sbjct: 202 EDRDAVARLATRCLSAVSAYDNTLESVETLDTAQAKFEDILNSPSVDSACEKIRSLAKAK 261
Query: 200 QLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYMTARGNLQRLMPKEVRILKYLLTIE 259
+LDS+L+L+I A++AAKES + E KDI+YHLY + +L+ + PKE+++LKYLL I
Sbjct: 262 ELDSSLILLINSAYAAAKESQTVTNEAKDIMYHLYKATKSSLRSITPKEIKLLKYLLNIT 321
Query: 260 DPEERLCGLKDAFTPGEEIEGKDVDTLYTTPEMLHALMKTLVDAYNFSREGSLLKEAKDM 319
DPEER L AF+PG++ E KD LYTTP+ LH +K ++DAY+ ++E + +KEAK M
Sbjct: 322 DPEERFSALATAFSPGDDHEAKDPKALYTTPKELHKWIKIMLDAYHLNKEETDIKEAKQM 381
Query: 320 MNPNMIEKI 328
P +I+++
Sbjct: 382 SQPIVIQRL 390
>sp|P40124|CAP1_MOUSE Adenylyl cyclase-associated protein 1 OS=Mus musculus GN=Cap1 PE=1
SV=4
Length = 474
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 12/92 (13%)
Query: 66 ADAEVDPEMKHKLLRLGRKLKEIDEDVQ--SHNELLEVIEAAPSEVSQIVSRRCKDFTQE 123
D + EM H L+L R L Q + N+L +++ ++ ++++ R K+ +
Sbjct: 66 GDVQKHAEMVHTGLKLERALLATASQCQQPAGNKLSDLLAPISEQIQEVITFREKNRGSK 125
Query: 124 FFEHLHTVAESYYNDPAKQDDIAKLGKLCVAA 155
FF HL V+ES I LG + +AA
Sbjct: 126 FFNHLSAVSES----------IQALGWVALAA 147
>sp|Q61W58|HSP90_CAEBR Heat shock protein 90 OS=Caenorhabditis briggsae GN=daf-21 PE=3
SV=1
Length = 706
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 99/235 (42%), Gaps = 34/235 (14%)
Query: 42 RRLLVFSKEWNNLRSNFFKRCQDRAD--AEVDPEMKHKLLRLGRKLK-EIDEDVQSHNEL 98
R +L SK +R N K+C + D AE K + G+ LK I ED + +L
Sbjct: 375 REMLQQSKILKVIRKNLVKKCMELFDEIAEDKDNFKKFYEQFGKNLKLGIHEDSTNRKKL 434
Query: 99 LEVIEAA------PSEVSQIVSRRCKDFTQEFF---EHLHTVAESYYNDPAKQDDIAKL- 148
E + A P+ + + VSR ++ TQ ++ E VA S + + K L
Sbjct: 435 SEFLRYATSAGEEPTSLKEYVSRMKENQTQIYYITGESKEVVAASAFVERVKSRGFEVLY 494
Query: 149 -----GKLCVAAVQAYD------TTTESIEALNAAELKFQDIINSPSVDAACR------- 190
+ CV ++ YD T E +E E K + + + + C+
Sbjct: 495 MCDPIDEYCVQQLKEYDGKKLVSVTKEGLELPETEEEKKKFEEDKVAYENLCKVIKDILE 554
Query: 191 -KIDSLAEKNQLDSALVLMITK--AWSAAKESNMMKEEVKDILYHLYMTARGNLQ 242
KI+ +A N+L S+ ++T WSA E M + ++D YM A+ +L+
Sbjct: 555 KKIEKVAVSNRLVSSPCCIVTSEYGWSANMERIMKAQALRDSSTMGYMAAKKHLE 609
>sp|A6X0J3|PYRH_OCHA4 Uridylate kinase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM
6882 / NCTC 12168) GN=pyrH PE=3 SV=1
Length = 240
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 162 TTESIEALNAAELKFQDIINSPSVDAA----------CRKIDSLAEKNQLDSALVLMITK 211
TT+S AL AAE++ ++ VD + DSL K LD L +M T
Sbjct: 142 TTDSAAALRAAEIEADALLKGTQVDGIYSADPKKDPNATRFDSLTHKEVLDRGLAVMDTA 201
Query: 212 AWSAAKESNM 221
A + A+E+N+
Sbjct: 202 AVALARENNI 211
>sp|Q08163|CAP1_RAT Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus GN=Cap1
PE=1 SV=3
Length = 474
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 12/92 (13%)
Query: 66 ADAEVDPEMKHKLLRLGRKLKEIDEDVQ--SHNELLEVIEAAPSEVSQIVSRRCKDFTQE 123
D + EM H L+L R L Q + N+L +++ ++ ++++ R K+ +
Sbjct: 66 GDVQKHAEMVHTGLKLERALLVTASQCQQPAGNKLSDLLAPISEQIQEVITFREKNRGSK 125
Query: 124 FFEHLHTVAESYYNDPAKQDDIAKLGKLCVAA 155
FF HL V+ES I LG + +AA
Sbjct: 126 FFNHLSAVSES----------IQALGWVALAA 147
>sp|Q1WRS0|ADDA_LACS1 ATP-dependent helicase/nuclease subunit A OS=Lactobacillus
salivarius (strain UCC118) GN=addA PE=3 SV=1
Length = 1248
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 17/115 (14%)
Query: 24 CDKLIEVFMVDKPTPTDWRRLLVFSKEWNNLRS---NF-FKRCQDRADAEVDPEMKHKLL 79
+KL + F D T + + +V KEWNNL++ NF FKR ++D +D + K +
Sbjct: 246 LEKLYQTFEQDCATIDELQDFVVGCKEWNNLKTTLQNFKFKRA--KSDRGLDDDQKKQKE 303
Query: 80 RLGRKL----KEIDEDVQ------SHNELLEVIEAAPSEVSQIVSRRCKDFTQEF 124
R+ + L K+I ED+ +E+ E+ + + ++ + +S K+F EF
Sbjct: 304 RINKTLRDGSKKIIEDLSVKYFALPEDEIKELTQKS-KQIVETLSEVVKEFGAEF 357
>sp|Q57CX9|PYRH_BRUAB Uridylate kinase OS=Brucella abortus biovar 1 (strain 9-941)
GN=pyrH PE=3 SV=1
Length = 240
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 10/70 (14%)
Query: 162 TTESIEALNAAELKFQDIINSPSVDA----------ACRKIDSLAEKNQLDSALVLMITK 211
TT+S AL AAE++ ++ VD + D L K LD L +M T
Sbjct: 142 TTDSAAALRAAEIEADALLKGTQVDGIYSADPKKDPGATRFDQLTHKEVLDRGLAVMDTA 201
Query: 212 AWSAAKESNM 221
A + A+E+N+
Sbjct: 202 AVALARENNI 211
>sp|O13792|SUB2_SCHPO ATP-dependent RNA helicase uap56 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=uap56 PE=1 SV=3
Length = 434
Score = 33.1 bits (74), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 187 AACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVK--DILYHLYMTARGNLQRL 244
A RKI+ L + + + V++ K+ S A E + + E I H G L
Sbjct: 281 AKNRKINDLLDSLEFNQ--VVIFVKSVSRANELDRLLRECNFPSICIH------GGL--- 329
Query: 245 MPKEVRILKYLLTIEDPEERLCGLKDAFTPGEEIEGKDVDTLYTTPEMLHALMKTLVDAY 304
P+E RI +Y +D ++R+C D F G +IE ++ Y P+ + + + A
Sbjct: 330 -PQEERIKRYK-AFKDFDKRICVATDVFGRGIDIERVNIVINYDMPDSPDSYLHRVGRAG 387
Query: 305 NFSREGSLLKEAKDMMNPNMIEKIEE 330
F +G + + + +++KI+E
Sbjct: 388 RFGTKGLAITFSSSEEDSQILDKIQE 413
>sp|A6LK98|PYRH_THEM4 Uridylate kinase OS=Thermosipho melanesiensis (strain BI429 / DSM
12029) GN=pyrH PE=3 SV=1
Length = 233
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 10/70 (14%)
Query: 162 TTESIEALNAAELKFQDIINSPSVDAA----------CRKIDSLAEKNQLDSALVLMITK 211
TT++ AL A E+K +I VD RK D+L +D L +M T+
Sbjct: 135 TTDTAAALRAVEMKADILIKGTKVDGIYDKDPKKFTDARKFDTLTYDEAIDKGLKIMDTE 194
Query: 212 AWSAAKESNM 221
A+S K +M
Sbjct: 195 AFSICKRYDM 204
>sp|Q8G0D7|PYRH_BRUSU Uridylate kinase OS=Brucella suis biovar 1 (strain 1330) GN=pyrH
PE=3 SV=2
Length = 240
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 10/70 (14%)
Query: 162 TTESIEALNAAELKFQDIINSPSVDA----------ACRKIDSLAEKNQLDSALVLMITK 211
TT+S AL AAE++ ++ VD + D L K LD L +M T
Sbjct: 142 TTDSAAALRAAEIEADALLKGTQVDGIYSADPKKDPGATRFDQLTHKEFLDRGLAVMDTA 201
Query: 212 AWSAAKESNM 221
A + A+E+N+
Sbjct: 202 AVALARENNI 211
>sp|Q3SYV4|CAP1_BOVIN Adenylyl cyclase-associated protein 1 OS=Bos taurus GN=CAP1 PE=2
SV=3
Length = 472
Score = 32.0 bits (71), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 66 ADAEVDPEMKHKLLRLGRKLKEIDEDVQ--SHNELLEVIEAAPSEVSQIVSRRCKDFTQE 123
D + EM H L+L R L Q + N+L +++ ++ ++V+ R K+ +
Sbjct: 67 GDVQKHAEMVHTGLKLERALLVTASQCQQPAGNKLSDLLAPISEQIQEVVTFREKNRGSK 126
Query: 124 FFEHLHTVAES 134
F HL V+ES
Sbjct: 127 LFNHLSAVSES 137
>sp|Q51Y68|ATG17_MAGO7 Autophagy-related protein 17 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=ATG17 PE=3 SV=1
Length = 504
Score = 31.6 bits (70), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 113/290 (38%), Gaps = 45/290 (15%)
Query: 2 DGEKRDEKDGSKSLDD-GKMIQVCDKLIEVFMVD---KPTPTDWRRLLVFSKEWNNLRSN 57
D +RD + K LDD G+ + ++ +VD +P + R L+ F E N R
Sbjct: 105 DVGRRDFEQLIKVLDDAGERLTRTMNVLHNTIVDPVFRPAGEEPRSLMFFVDEGNVDRLT 164
Query: 58 FFKRCQDRADAEVDPEMKHKLLRLGRKLKEIDEDVQSHNELLEVIEAAPSEVSQIVSRRC 117
++ E E+K L D D++S + L PS + + SR
Sbjct: 165 -------KSLKESIAELKAAETSYDGDLLRFDNDIRSVKKHLLAAPGLPSPSNSVFSRPM 217
Query: 118 KDFTQEFFEHLHTVAESYYNDPAKQDDIAKLGKLCVAAVQAYDTTTESIEALNAAE---- 173
D + H H +AE+ + + + LCV AV+A + ++ AAE
Sbjct: 218 ADLVRTLTNHSHAMAENLSS-------LTRHFDLCVTAVRASEGGA-ALALRKAAEDGPS 269
Query: 174 -LKFQDIINSPSVDAACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYH 232
+ +I DA + I +++ + + + V+M +++ + E V+DI
Sbjct: 270 TISISGVIRGDGTDADDQDIKTMSARERDEMLRVVM--------QDATEVGEVVRDINSG 321
Query: 233 L-YMTARGNLQRLMPKEVRILKYLLTIEDPEERLCGLKDAFTPGEEIEGK 281
L M A G L VR C L DAF EE+E +
Sbjct: 322 LEEMQALGALVEQQAAHVRTAHE-----------CTL-DAFRRLEEVEAR 359
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 124,173,201
Number of Sequences: 539616
Number of extensions: 5075413
Number of successful extensions: 16998
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 16964
Number of HSP's gapped (non-prelim): 90
length of query: 334
length of database: 191,569,459
effective HSP length: 118
effective length of query: 216
effective length of database: 127,894,771
effective search space: 27625270536
effective search space used: 27625270536
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)