BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048142
(352 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 261/398 (65%), Positives = 301/398 (75%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+VEDS EEALLLFRE+Q KG+ GDKVTM SLLLACTHLGALE+G WLH YI K+ I+VD
Sbjct: 263 HVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVD 322
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL KDVMT TALI+ LAMCGQ AL+YF EM I
Sbjct: 323 VALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHI 382
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+GVKPDAITFVGVL ACSHAG VDE ISHFN MS+ YGI+P+IEHYG LV ILGRAGRIA
Sbjct: 383 KGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIA 442
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AEELIK+MPMA D FVLGGLLGACRIH NLEAAERAA+QLLE+ P + G+YV+LSN Y
Sbjct: 443 EAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYK 502
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
SS+KW++ KR RELMAER ++KPPGC IEV GVVHEFVK
Sbjct: 503 SSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDMIS 562
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VP+KSEVLFDM EEEKET L+LH+EKLAI FGL+S G IR++KNLR+C+D
Sbjct: 563 KLKNAGYVPDKSEVLFDMAEEEKETELSLHSEKLAIAFGLLSTSVGTPIRVVKNLRICSD 622
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+AT +ISK+YNRE +V DRNRFHHFK+G+CSC+ FW
Sbjct: 623 CHSATKLISKLYNREIIVRDRNRFHHFKDGTCSCRGFW 660
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLAC--------THLGALEVGMWLHPYIMKKNIEV 59
+EALL ++E+ +GL D+ T SL +C H + ++G Y + +
Sbjct: 70 QEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSEGKQIHCHSTKLGFASDTYAQNTLMNM 129
Query: 60 DVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYE-MQIRGVKPDAIT 107
G M K V++ +I V A Q N+A+ F M+ VKP+ +T
Sbjct: 130 YSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVT 189
Query: 108 FVGVLVACSHA 118
V VL AC+ A
Sbjct: 190 LVNVLTACARA 200
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 257/398 (64%), Positives = 295/398 (74%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+VEDS EEAL LF E+Q G+ GDKVTM SLL+ACTHLGALE+G WLH YI K+ IEVD
Sbjct: 183 HVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVD 242
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL KDVMT TALIV LAMCGQG KALE F+EMQ+
Sbjct: 243 VALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQM 302
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
VKPDAITFVGVL ACSHAGLV+E I++FN M KYGI+PSIEHYGC+V +LGRAGRIA
Sbjct: 303 SEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIA 362
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE+LI+NMPMA D+FVL GLL ACRIH NL AERAAQQL+EL P NGG+YV+LSN YS
Sbjct: 363 EAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYS 422
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
S + W+ K++RELM ERNIKKPPGC IEV GVVHEFVK
Sbjct: 423 SMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMR 482
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VP+KSEVLFDMDE+EKE L+LH+EKLAI FGL+S PG IR++KNLRVC+D
Sbjct: 483 RLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSD 542
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A IS+VYNRE +V DRNRFHHF GSCSC+DFW
Sbjct: 543 CHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 580
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 257/398 (64%), Positives = 295/398 (74%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+VEDS EEAL LF E+Q G+ GDKVTM SLL+ACTHLGALE+G WLH YI K+ IEVD
Sbjct: 314 HVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVD 373
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL KDVMT TALIV LAMCGQG KALE F+EMQ+
Sbjct: 374 VALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQM 433
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
VKPDAITFVGVL ACSHAGLV+E I++FN M KYGI+PSIEHYGC+V +LGRAGRIA
Sbjct: 434 SEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIA 493
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE+LI+NMPMA D+FVL GLL ACRIH NL AERAAQQL+EL P NGG+YV+LSN YS
Sbjct: 494 EAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYS 553
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
S + W+ K++RELM ERNIKKPPGC IEV GVVHEFVK
Sbjct: 554 SMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMR 613
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VP+KSEVLFDMDE+EKE L+LH+EKLAI FGL+S PG IR++KNLRVC+D
Sbjct: 614 RLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSD 673
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A IS+VYNRE +V DRNRFHHF GSCSC+DFW
Sbjct: 674 CHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 711
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 79/190 (41%), Gaps = 23/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EA+ LFR ++ + +++T+V++L AC LE +H YI + I
Sbjct: 213 YAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFH 272
Query: 61 VGLGMALKDV----------------MTLTALIVVLAMC------GQGNKALEYFYEMQI 98
L AL DV M L M +AL F EMQ+
Sbjct: 273 TVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQL 332
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVK D +T +L+AC+H G + E ++ EK I + LV + + G I
Sbjct: 333 SGVKGDKVTMASLLIACTHLGAL-ELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIE 391
Query: 159 KAEELIKNMP 168
A + + MP
Sbjct: 392 SAMRVFQEMP 401
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 19/137 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLAC--------THLGALEVGMWLHPYI 52
Y + +A+L ++ + +GL D+ T SL +C H + ++G YI
Sbjct: 115 YTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCEGKQLHCHSTKLGFASDAYI 174
Query: 53 MKKNIEVDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV 101
+ + G M K V++ +I A ++A++ F M+I V
Sbjct: 175 QNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASV 234
Query: 102 KPDAITFVGVLVACSHA 118
KP+ IT V VL AC+ +
Sbjct: 235 KPNEITLVNVLTACARS 251
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/398 (46%), Positives = 253/398 (63%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ + +EAL+LFRE+Q + D+ TMVS+L AC LGALE+G W+ YI K ++ D
Sbjct: 238 YLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKND 297
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL +D T TA++V LA+ G G +AL F +M
Sbjct: 298 TFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLK 357
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V PD +T+VGVL AC+H G+VDE F M+ ++GI P+I HYGC+V +LG+AG +
Sbjct: 358 ASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLK 417
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E+IKNMPM + V G LLGACRIH + E AERA +Q+LEL P+NG YV+ N Y+
Sbjct: 418 EAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYA 477
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
+ KW K++ +R++M +R IKK PGC LIE++G+VHEFV
Sbjct: 478 ACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTS 537
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+ PN SEV D+ EE+KE A+ H+EKLAI FGL++ PGV IRI+KNLR+C D
Sbjct: 538 DLKIAGYSPNTSEVFLDIAEEDKENAVYRHSEKLAIAFGLINSGPGVTIRIVKNLRMCID 597
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH ++SKVY+RE +V DR RFHHF++GSCSCKD+W
Sbjct: 598 CHHVAKLVSKVYDREVIVRDRTRFHHFRHGSCSCKDYW 635
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/398 (46%), Positives = 256/398 (64%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y++ + +E L LFRE+Q + D+ TMVS+L AC HLGALE+G W+ YI K I++D
Sbjct: 327 YLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKID 386
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL +D ++ TA+I LA+ G G +AL+ F +M
Sbjct: 387 SFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLK 446
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ PD +T +GVL AC+H+G+VD+ F M+ ++GI P++ HYGC+V +LGRAG +
Sbjct: 447 ASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLK 506
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E+IKNMP+ + V G LLGACR+H + E AE AAQQ+LEL P+NG YV+L N Y+
Sbjct: 507 EAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYA 566
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
+ +W+K+ +R+LM +R IKK PGC LIE++G VHEFV
Sbjct: 567 ACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSV 626
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+ P+ SEV D+ EEEKE+A+ H+EKLAI FGL+S PGV IRI+KNLR+C D
Sbjct: 627 DLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGVTIRIVKNLRMCVD 686
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH ++SKVYNRE +V DR RFHHF++GSCSCKD+W
Sbjct: 687 CHYVAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 68/175 (38%), Gaps = 53/175 (30%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE-- 58
Y +E++ LF E++ + +T+VS+L AC+ L L VG +H Y+ IE
Sbjct: 195 YNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPV 254
Query: 59 ----------------VDVGLG----MALKDVMTLTALIVVLAMCGQGNKALEY------ 92
+D LG M +DV++ TA++ GQ A Y
Sbjct: 255 RVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPE 314
Query: 93 -------------------------FYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
F EMQ +KPD T V +L AC+H G ++
Sbjct: 315 RDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALE 369
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 22/129 (17%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-- 67
A+ ++ E+ +G+ D+ T LL T A++ G LH +I+K +V + AL
Sbjct: 103 AVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIH 162
Query: 68 --------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
DV+T +I Q +++++ F EM+ V P +IT
Sbjct: 163 LYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSIT 222
Query: 108 FVGVLVACS 116
V VL ACS
Sbjct: 223 LVSVLSACS 231
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/398 (47%), Positives = 249/398 (62%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + S C EAL LF E+Q + +++TMVS+L +C LGALE G W+H +I KK +++
Sbjct: 301 YSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLT 360
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL K+V++ T LI LA GQG KALEYFY M
Sbjct: 361 VTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLE 420
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ V+P+ +TF+GVL ACSHAGLVDE F MS +GI P IEHYGC+V ILGRAG I
Sbjct: 421 KNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIE 480
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + IKNMP+ + + LL +C++H N+E E + +QL+ L P + G Y++LSN Y+
Sbjct: 481 EAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYA 540
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S +W+ ++R M E+ IKK PGC LIE+DGV+HEF
Sbjct: 541 SVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMK 600
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VPN +E D +E++KE++++ H+EKLAI FGL+ PG IRI KNLRVC D
Sbjct: 601 QIKSAGYVPNTAEARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTD 660
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT ++SKV+NRE VV DR RFHHFK GSCSC D+W
Sbjct: 661 CHNATKLVSKVFNREIVVRDRTRFHHFKEGSCSCNDYW 698
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 93/192 (48%), Gaps = 25/192 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EE + LF E+ + D+VT+VS+L AC L LE+G W++ Y+ +K ++ +
Sbjct: 200 YTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGN 259
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L +L +DV+ +A+I + + +AL+ F+EMQ
Sbjct: 260 PTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQK 319
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+ P+ IT V +L +C+ G ++ + HF + +K ++ ++ L+ + G +
Sbjct: 320 ANIDPNEITMVSILSSCAVLGALETGKWVHFFI--KKKRMKLTVTLGTALMDFYAKCGSV 377
Query: 158 AKAEELIKNMPM 169
+ E+ MP+
Sbjct: 378 ESSIEVFGKMPV 389
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 25/182 (13%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK---------KNI-- 57
EA+LLF+E+ + D+ T +L C+ L AL G +H IMK KN
Sbjct: 107 EAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLI 166
Query: 58 -------EVDVGL----GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
EV+V M+ ++V T ++ G + ++ F+EM ++ D +
Sbjct: 167 HMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEV 226
Query: 107 TFVGVLVACSHAGLVDERISHF-NLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
T V VL AC L D + + N E+ G++ + LV + + G++ A L
Sbjct: 227 TLVSVLTACGR--LADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFD 284
Query: 166 NM 167
M
Sbjct: 285 QM 286
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 183/390 (46%), Positives = 254/390 (65%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LFRE+Q + D+ TMVS+L AC HLGALE+G W+ YI K +I+ D +G AL
Sbjct: 323 EALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALI 382
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
KD T TA+IV LA+ G G +AL F M + PD I
Sbjct: 383 DMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEI 442
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
T++GVL AC+HAG+V++ S F M+ ++GI+P++ HYGC+V +LGRAGR+ +A E+I N
Sbjct: 443 TYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVN 502
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP+ + V G LLGACR+H N++ AE AA+Q+LEL P+NG YV+L N Y++ ++W+ +
Sbjct: 503 MPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENL 562
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGFV 262
+++R+LM ER IKK PGC L+E++G V+EFV KAG+
Sbjct: 563 RQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQDLIKAGYS 622
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ SEV D+ EE+KETAL H+EKLAI + L+S PG+ IRI+KNLR+C DCH ++
Sbjct: 623 PDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGITIRIVKNLRMCVDCHHMAKLV 682
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S+ YNRE +V D+ RFHHF++GSCSC +FW
Sbjct: 683 SEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 110/255 (43%), Gaps = 61/255 (23%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI---------MKKNIE 58
+++ +LF E++ +G++ + VT+V +L AC+ L LE G ++ YI + +N+
Sbjct: 190 KKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVL 249
Query: 59 VD-------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEY------------- 92
+D V M +DV++ T+++ A GQ + A +Y
Sbjct: 250 IDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWT 309
Query: 93 ------------------FYEMQIRGVKPDAITFVGVLVACSHAGLVD--ERISHFNLMS 132
F EMQ+ VKPD T V +L AC+H G ++ E + +
Sbjct: 310 AMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTY---I 366
Query: 133 EKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAA 192
+K I+ L+ + + G + KA+++ K M D F ++ I+ + E A
Sbjct: 367 DKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHK-DKFTWTAMIVGLAINGHGEEA 425
Query: 193 ERAAQQLLE--LLPD 205
++E + PD
Sbjct: 426 LAMFSNMIEASITPD 440
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 367 bits (943), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 192/399 (48%), Positives = 250/399 (62%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y ++ +EAL LFR++Q + + VT VS+L AC +LGAL++G W+H YI KK
Sbjct: 340 YSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLT 399
Query: 56 ----------------NIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
NIE V GM K + + A+I LAM G N ALE F +M+
Sbjct: 400 NTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMR 459
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G +PD ITFVGVL ACSHAGLV+ F+ M E Y I P ++HYGC++ +LGRAG
Sbjct: 460 DEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLF 519
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+AE L+KNM M D + G LLGACR+H N+E E AA+ L EL P+N G+YV+LSN Y
Sbjct: 520 DEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIY 579
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+++ +W V RIR + ++ +KK PGC IEVD VVHEF+
Sbjct: 580 ATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEID 639
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
KAG VP+ SEVL+DMDEE KE +L+ H+EKLAI FGL+S P IRI+KNLRVC
Sbjct: 640 QLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCG 699
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+CH+A +ISK++NRE + DRNRFHHFK+GSCSC D+W
Sbjct: 700 NCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 22/189 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI----MKKN 56
Y + EEAL F+E++ + ++ TMV++L AC G+LE+G W+ +I + N
Sbjct: 239 YAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSN 298
Query: 57 IEV------------------DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + D+ G+ KD+++ +I + +AL F +MQ
Sbjct: 299 LRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQ 358
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V+P+ +TFV +L AC++ G +D + +K+ + + L+ + + G I
Sbjct: 359 SNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIE 418
Query: 159 KAEELIKNM 167
A+++ M
Sbjct: 419 AAKQVFAGM 427
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
+ ++D ++ A+I A G+ +AL +F EM+ V P+ T V VL AC+ +G + E
Sbjct: 224 IPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSL-EL 282
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ E +G+ ++ L+ + + G + KA +L + +
Sbjct: 283 GNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGI 325
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 360 bits (925), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 186/398 (46%), Positives = 244/398 (61%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y + +EAL LFRE+ G+ ++T +S+L +C HLGA+++G W+H YI K
Sbjct: 337 YTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVS 396
Query: 56 ---------------NIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
NI V GM +K + + A+I LAM GQ +KA E F +M
Sbjct: 397 TSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSS 456
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++P+ ITFVG+L AC HAGLVD F+ M + Y I P +HYGC++ +LGRAG
Sbjct: 457 DGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFE 516
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE L++NM + D + G LLGACR H +E E A++L EL PDN G+YV+LSN Y+
Sbjct: 517 EAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYA 576
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ KW V RIR + +R +KK PGC IEVD VVHEF+
Sbjct: 577 GAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDE 636
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
GFV + SEVL+DMDEE KE AL+ H+EKLAI FGL+S PG IRIIKNLRVC +
Sbjct: 637 QLKVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRN 696
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+AT +ISK++NRE + DRNRFHHFK+GSCSC D+W
Sbjct: 697 CHSATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EALLLF +++ + ++ T+VS+L AC AL++G + +I + + +
Sbjct: 236 YAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSN 295
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L AL +DV++ +I +AL F EM
Sbjct: 296 LKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLA 355
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
GV+P ITF+ +L +C+H G +D
Sbjct: 356 SGVEPTEITFLSILPSCAHLGAID 379
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 190/398 (47%), Positives = 241/398 (60%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL LF E+Q + DKVTMVS+L AC +GAL +G +H I + IE+D
Sbjct: 243 YAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEID 302
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ LG +L +DV +A+I+ LA G G AL++F +M
Sbjct: 303 LKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMIS 362
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+KP+ +TF+GVL ACSH GLVDE ++F MS+ Y + P IEHYGC+V ILGRAGR+
Sbjct: 363 EDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQ 422
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A ELIK+MP A D V LLGACRI+ N+E AE A LLEL P G+YV+LSN YS
Sbjct: 423 EAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYS 482
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+++W KV +R +M NI+K PG IEVD VHEFV
Sbjct: 483 QAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITA 542
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P + VL D DE+EKE AL H+EKLAI FGL+S PG IRI+KNLRVC+D
Sbjct: 543 RLKANGYAPLTASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRVCDD 602
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A +IS+ Y R +V DRNRFHHF NGSCSCKD+W
Sbjct: 603 CHIAIKLISRTYKRRIIVRDRNRFHHFVNGSCSCKDYW 640
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 60 DVGLGMAL------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLV 113
DVG L +D+++ +++I A Q N+AL F+EMQ+ V PD +T V VL
Sbjct: 217 DVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLS 276
Query: 114 ACSHAG 119
AC G
Sbjct: 277 ACGDVG 282
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 175/398 (43%), Positives = 250/398 (62%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++S +E L LF+++ + + ++ +V+ L AC HLGA+E G W+ Y+ +KN+ +
Sbjct: 243 YVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLT 302
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL K+V+ +A+I LA+ GQG AL F +M++
Sbjct: 303 VRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEM 362
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+GVKP+ +TF+G+L ACSH+ LVDE S F+ M+ YG++P+ H+ C+V + GRAG +
Sbjct: 363 QGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLD 422
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A+ +IK+MP + + G LL ACRIH + E E+ ++LLEL P++GG YV+LSN Y+
Sbjct: 423 QAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYA 482
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ +W +V +R +M ER + K PGC I++ +HEFV
Sbjct: 483 ACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQ 542
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+ P+ +VL DMDEEEKETAL H+EKLAI FGL+ PG IRI KNLRVC D
Sbjct: 543 ELKAAGYKPDTGQVLLDMDEEEKETALCHHSEKLAIAFGLIKTDPGTTIRITKNLRVCAD 602
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+AT +ISK+YNRE +V DR RFHHF++GSCSC DFW
Sbjct: 603 CHSATKLISKIYNREIIVRDRCRFHHFRDGSCSCMDFW 640
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 178/398 (44%), Positives = 246/398 (61%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ + +EAL LFR +Q + D+ TMVS+L AC HLGALE+G W+ YI + I+ D
Sbjct: 326 YIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKND 385
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL +D T TA+IV LA+ G G KAL+ F M
Sbjct: 386 LFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLK 445
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ PD IT++GVL AC+H GLVD+ +F M+ ++GI P+I HYGCLV +L RAGR+
Sbjct: 446 ASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLK 505
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E+I+NMP+ + V G LL CR++ + AE +Q+LEL PDNG YV+L N Y+
Sbjct: 506 EAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYA 565
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
+ ++W ++ +R++M ++ IKK PGC LIE++G VHEFV
Sbjct: 566 ACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQ 625
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+ P+ SEV D+ EE+KE ++ H+EKLAI FGL++ PGV IRI KNLR+C D
Sbjct: 626 DLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRITKNLRMCMD 685
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH ++SKVYNRE +V DR RFHHFK+G CSCKD+W
Sbjct: 686 CHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 723
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 21/189 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EE+ LF ++ K + VT+V +L AC+ L L G +H Y+ KN +V+ L +
Sbjct: 201 EESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV--KNCKVESNLVLE- 257
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISH 127
A+I + A CG+ + AL F M R D I++ ++ ++ G +D ++
Sbjct: 258 ------NAMIDMYADCGEMDSALGIFRSMNNR----DIISWTTIVSGFTNLGEIDVARNY 307
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP---MALDHFVLGGLLGACR 184
F+ M EK + + G YI R+ R +A EL +NM + D F + +L AC
Sbjct: 308 FDKMPEKDYVSWTAMIDG---YI--RSNRFKEALELFRNMQATNVKPDEFTMVSVLTACA 362
Query: 185 IHDNLEAAE 193
LE E
Sbjct: 363 HLGALELGE 371
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + AL +FR + ++ D ++ +++ T+LG ++V Y K
Sbjct: 264 YADCGEMDSALGIFRSMNNR----DIISWTTIVSGFTNLGEIDVA---RNYFDK------ 310
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
M KD ++ TA+I + +ALE F MQ VKPD T V VL AC+H G
Sbjct: 311 ----MPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGA 366
Query: 121 VD--ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGG 178
++ E I + ++ I+ + L+ + + G + KAE + + M D F
Sbjct: 367 LELGEWIRTY---IDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQR-DKFTWTA 422
Query: 179 LLGACRIHDNLEAAERAAQQLLE--LLPD 205
++ ++ + E A +L+ +LPD
Sbjct: 423 MIVGLAVNGHGEKALDMFSNMLKASILPD 451
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 353 bits (907), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 179/398 (44%), Positives = 245/398 (61%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + C EAL LF E+Q + + VTMVS+L AC LGALE G W+H YI +K + +
Sbjct: 296 YTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLT 355
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ LG AL K+ T TALI +A G+G +ALE F M+
Sbjct: 356 IILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRK 415
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
++P +TF+GVL+ACSH+ LV+E HF+ M++ YGI+P EHYGC+V +LGRAG I
Sbjct: 416 ASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLID 475
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I+ MP+ + + LL +C +H N+E E A +Q++ L P + G Y++LSN Y+
Sbjct: 476 EAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYA 535
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
S +WK IR+ M +R I+K PGC LIE+DGVV EF
Sbjct: 536 SVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMID 595
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG++PN ++V ++DE EKE +++ H+EKLAI FGL+ PG IR+ KNLRVC D
Sbjct: 596 RIKMAGYIPNTADVRLEVDEHEKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCTD 655
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+AT +ISKVYNRE VV DRNRFHHFK+G+CSC D+W
Sbjct: 656 CHSATKLISKVYNREIVVRDRNRFHHFKDGTCSCNDYW 693
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 25/192 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+++ E + +F+ + G+ D++T+VS++ AC +G ++G W+ Y+ +K + +
Sbjct: 195 YMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRN 254
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L GM +DV+ +A+I Q +AL F EMQ+
Sbjct: 255 RNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQL 314
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V+P+ +T V VL AC+ G ++ + H + ++ + +I LV + G I
Sbjct: 315 AEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSL--TIILGTALVDFYAKCGCI 372
Query: 158 AKAEELIKNMPM 169
A E ++MP+
Sbjct: 373 DDAVEAFESMPV 384
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 353 bits (907), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 178/398 (44%), Positives = 246/398 (61%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ + +EAL LFR +Q + D+ TMVS+L AC HLGALE+G W+ YI + I+ D
Sbjct: 347 YIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKND 406
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL +D T TA+IV LA+ G G KAL+ F M
Sbjct: 407 LFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLK 466
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ PD IT++GVL AC+H GLVD+ +F M+ ++GI P+I HYGCLV +L RAGR+
Sbjct: 467 ASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLK 526
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E+I+NMP+ + V G LL CR++ + AE +Q+LEL PDNG YV+L N Y+
Sbjct: 527 EAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYA 586
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
+ ++W ++ +R++M ++ IKK PGC LIE++G VHEFV
Sbjct: 587 ACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQ 646
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+ P+ SEV D+ EE+KE ++ H+EKLAI FGL++ PGV IRI KNLR+C D
Sbjct: 647 DLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRITKNLRMCMD 706
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH ++SKVYNRE +V DR RFHHFK+G CSCKD+W
Sbjct: 707 CHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 21/189 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EE+ LF ++ K + VT+V +L AC+ L L G +H Y+ KN +V+ L +
Sbjct: 222 EESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV--KNCKVESNLVLE- 278
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISH 127
A+I + A CG+ + AL F M R D I++ ++ ++ G +D ++
Sbjct: 279 ------NAMIDMYADCGEMDSALGIFRSMNNR----DIISWTTIVSGFTNLGEIDVARNY 328
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP---MALDHFVLGGLLGACR 184
F+ M EK + + G YI R+ R +A EL +NM + D F + +L AC
Sbjct: 329 FDKMPEKDYVSWTAMIDG---YI--RSNRFKEALELFRNMQATNVKPDEFTMVSVLTACA 383
Query: 185 IHDNLEAAE 193
LE E
Sbjct: 384 HLGALELGE 392
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + AL +FR + ++ D ++ +++ T+LG ++V Y K
Sbjct: 285 YADCGEMDSALGIFRSMNNR----DIISWTTIVSGFTNLGEIDVA---RNYFDK------ 331
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
M KD ++ TA+I + +ALE F MQ VKPD T V VL AC+H G
Sbjct: 332 ----MPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGA 387
Query: 121 VD--ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGG 178
++ E I + ++ I+ + L+ + + G + KAE + + M D F
Sbjct: 388 LELGEWIRTY---IDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQR-DKFTWTA 443
Query: 179 LLGACRIHDNLEAAERAAQQLLE--LLPD 205
++ ++ + E A +L+ +LPD
Sbjct: 444 MIVGLAVNGHGEKALDMFSNMLKASILPD 472
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 353 bits (907), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 176/398 (44%), Positives = 254/398 (63%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ +EAL +F+++Q + + + S+L AC+++GA++ G W+H Y+ + +I++D
Sbjct: 269 YISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLD 328
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG AL +++ T A+I LA+ G+ ALE F ++Q
Sbjct: 329 AVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQE 388
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+KP+ IT VGVL AC+HAG VD+ + F M E YG+ P +EHYGC+V +LGR+G +
Sbjct: 389 GRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFS 448
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE+LI +MPM + V G LLGACRIH N + AER + LLEL P N G YV+LSN Y+
Sbjct: 449 EAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYA 508
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF-------------------VK- 258
++ V +IR+LM +R IK PG +++++G VHEF +K
Sbjct: 509 KVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKE 568
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG P+ S+VLFD+DEEEKETA+N H+EKLAI FGL++ +PG I I+KNLRVC+D
Sbjct: 569 RLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDD 628
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+AT +IS++++RE +V DR R+HHFKNG+CSCKDFW
Sbjct: 629 CHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 4/138 (2%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE- 123
M+ +D ++ ++++ G+ +ALE F +MQ +P VL ACS+ G +D+
Sbjct: 254 MSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQG 313
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGAC 183
R H L ++ I+ L+ + + GR+ E+ + M + F ++G
Sbjct: 314 RWVHAYL--KRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMK-EREIFTWNAMIGGL 370
Query: 184 RIHDNLEAAERAAQQLLE 201
IH E A +L E
Sbjct: 371 AIHGRAEDALELFSKLQE 388
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 353 bits (905), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 176/398 (44%), Positives = 253/398 (63%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ +EAL +F+++Q + + + S+L AC+++GA++ G W+H Y+ + +I++D
Sbjct: 269 YISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLD 328
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG AL +++ T A+I LA+ G+ ALE F ++Q
Sbjct: 329 AVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQE 388
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+KP+ IT VGVL AC+HAG VD+ + F M E YG+ P +EHYGC+V +LGR+G +
Sbjct: 389 GRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFS 448
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE+LI +MPM + V G LLGACRIH N + AER + LLEL P N G YV+LSN Y+
Sbjct: 449 EAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYA 508
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF-------------------VK- 258
++ V +IR+LM R IK PG +++++G VHEF +K
Sbjct: 509 KVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKE 568
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG P+ S+VLFD+DEEEKETA+N H+EKLAI FGL++ +PG I I+KNLRVC+D
Sbjct: 569 RLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDD 628
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+AT +IS++++RE +V DR R+HHFKNG+CSCKDFW
Sbjct: 629 CHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 4/138 (2%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE- 123
M+ +D ++ ++++ G+ +ALE F +MQ +P VL ACS+ G +D+
Sbjct: 254 MSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQG 313
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGAC 183
R H L ++ I+ L+ + + GR+ E+ + M + F ++G
Sbjct: 314 RWVHAYL--KRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMK-EREIFTWNAMIGGL 370
Query: 184 RIHDNLEAAERAAQQLLE 201
IH E A +L E
Sbjct: 371 AIHGRAEDALELFSKLQE 388
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 350 bits (898), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 175/398 (43%), Positives = 244/398 (61%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ A+ +F+++Q + + +VTMVSLL AC HLGAL++G W+H YI K +++D
Sbjct: 180 YVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKID 239
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL K++ ++IV L M G+G +A+ F M+
Sbjct: 240 VVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEK 299
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD +TFVG+L CSH+GL+ +F+ M YG+ P +EHYGC+V +LGRAG +
Sbjct: 300 EGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLK 359
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A ELI+ MPM + VLG LL AC+IH + + E+ QQLLEL P +GG+YV LSN Y+
Sbjct: 360 EALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYA 419
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
S +W V R+LM +R + K PGC IEV+ +VHEFV
Sbjct: 420 SLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAK 479
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G VPN + VL D++EEEKE A+ H+E++A+ FGL+S PG IR++KNLR C+D
Sbjct: 480 ELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSD 539
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A +IS + RE +V DR RFHHF+NGSCSC D+W
Sbjct: 540 CHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 66 ALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
+ ++ +T +I CG+ A+ F +MQ VKP +T V +L AC+H G +D
Sbjct: 166 SARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALD 222
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 350 bits (898), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 175/398 (43%), Positives = 244/398 (61%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ A+ +F+++Q + + +VTMVSLL AC HLGAL++G W+H YI K +++D
Sbjct: 108 YVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKID 167
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL K++ ++IV L M G+G +A+ F M+
Sbjct: 168 VVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEK 227
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD +TFVG+L CSH+GL+ +F+ M YG+ P +EHYGC+V +LGRAG +
Sbjct: 228 EGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLK 287
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A ELI+ MPM + VLG LL AC+IH + + E+ QQLLEL P +GG+YV LSN Y+
Sbjct: 288 EALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYA 347
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
S +W V R+LM +R + K PGC IEV+ +VHEFV
Sbjct: 348 SLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAK 407
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G VPN + VL D++EEEKE A+ H+E++A+ FGL+S PG IR++KNLR C+D
Sbjct: 408 ELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSD 467
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A +IS + RE +V DR RFHHF+NGSCSC D+W
Sbjct: 468 CHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 505
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 56/145 (38%), Gaps = 24/145 (16%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
+E C + L + + + K + +L +C G ++G H IMK E D+
Sbjct: 6 LESGVCPDFLGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDM 65
Query: 62 GLGMALKDV------------------------MTLTALIVVLAMCGQGNKALEYFYEMQ 97
L L D +T +I CG+ A+ F +MQ
Sbjct: 66 ILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQ 125
Query: 98 IRGVKPDAITFVGVLVACSHAGLVD 122
VKP +T V +L AC+H G +D
Sbjct: 126 SENVKPTEVTMVSLLSACAHLGALD 150
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 176/398 (44%), Positives = 242/398 (60%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++S ++A+ L+ +Q +G+ ++ MVS++ +C HLGALE+G H YI++ + V+
Sbjct: 220 YAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVN 279
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ LG AL +D ++ T LI AM G KALEYF M+
Sbjct: 280 LILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEK 339
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ P ITF VL ACSH GLV+ + F M Y I P +EHYGC+V +LGRAG++A
Sbjct: 340 AGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLA 399
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE+ + MPM + + G LLGACRIH N E AERA + L+EL P++ G YV+LSN Y+
Sbjct: 400 EAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYA 459
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ KW+ V+ IR++M ER + KPPG L E+DG VH+F
Sbjct: 460 RTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVHKFTIGDKTHPEIQQIERMWEEILG 519
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+ N + LFD+DEEEKE+ ++ H+EKLAI + ++ IRI+KNLRVC D
Sbjct: 520 KIRLAGYTGNNDDALFDIDEEEKESNIHRHSEKLAIAYAIMRTKGHDPIRIVKNLRVCED 579
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTAT +ISKVY RE +V DRNRFHHFK G+CSC D+W
Sbjct: 580 CHTATKLISKVYERELIVRDRNRFHHFKGGACSCMDYW 617
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 182/398 (45%), Positives = 242/398 (60%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + E L+LF+E+Q +G D+ +VS++ ACTHL AL+ G W+H YI K ++++
Sbjct: 396 YAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKIN 455
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ LG L K V T ALI+ LAM G +K+L+ F EM+
Sbjct: 456 IILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKE 515
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV P+ ITFV VL AC H GLVDE HFN M +++ I P+I+HYGC+V +LGRAG +
Sbjct: 516 HGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLK 575
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AEELI++MPMA D G LLGAC+ + + E ER ++L+EL PD+ G V+LSN Y+
Sbjct: 576 EAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYA 635
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
S W V +R +M + + K PGC +IE G VHEF+
Sbjct: 636 SKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAK 695
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P+ EV D+DEEEKET L H+EKLAI FGL++ P IRI+KNLR+CND
Sbjct: 696 KLKLEGYAPDTREVSLDIDEEEKETTLFRHSEKLAIAFGLIAIDPPTPIRIVKNLRICND 755
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA +ISK +NRE VV DR+RFHHFK GSCSC D+W
Sbjct: 756 CHTAAKLISKAFNREIVVRDRHRFHHFKQGSCSCMDYW 793
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 71/176 (40%), Gaps = 53/176 (30%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EEAL+LF+E+ G+ D+V ++S+L AC+ L + G +H ++K IE
Sbjct: 264 YEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETY 323
Query: 61 VGLGMAL----------------------------------------------------- 67
V L AL
Sbjct: 324 VNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPD 383
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE 123
KD ++ +A+I A + + L F EMQI G KPD V V+ AC+H +D+
Sbjct: 384 KDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQ 439
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 347 bits (890), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 180/398 (45%), Positives = 244/398 (61%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + E L LF E+Q + D+ +VS++ ACTHL AL+ G W+H YI K ++V+
Sbjct: 411 YAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVN 470
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG L D V + ALI+ LA+ G ++L+ F EM+
Sbjct: 471 VILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKN 530
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV P+ ITF+GVL AC H GLVDE HF M EK+GI P+++HYGC+V +LGRAG +
Sbjct: 531 NGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLN 590
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE+LI++MPMA D G LLGAC+ H + E ER ++L+EL PD+ G +V+LSN ++
Sbjct: 591 EAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFA 650
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
S W+ V +R +M ++ + K PGC LIE +GVVHEF+
Sbjct: 651 SKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAK 710
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P+ +EV D+DEEEKET L H+EKLAI FGL++ P IRI+KNLR+CND
Sbjct: 711 RLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICND 770
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA +ISK Y RE VV DR+RFH+FK G+CSC D+W
Sbjct: 771 CHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 808
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 53/176 (30%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EEAL++F E+ G+ D+V +VS+L AC HL ++ G +H +++ IE
Sbjct: 279 YEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESY 338
Query: 61 VGLGMAL----------------------------------------------------- 67
V L AL
Sbjct: 339 VNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPE 398
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE 123
KD+++ +A+I A ++ L F+EMQ+ ++PD V V+ AC+H +D+
Sbjct: 399 KDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQ 454
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 92/206 (44%), Gaps = 25/206 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ EEA L+F ++ + + +M+ LL ++G + + +
Sbjct: 217 YVKKGDVEEAKLIFDQMPQRNIVASN-SMIVLLG--------KMGQVMEAWKLFNE---- 263
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
M KD+++ +ALI G +AL F EM G++ D + V VL AC+H +
Sbjct: 264 ----MDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSI 319
Query: 121 VDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGL 179
V ++ H ++ + GI + L+++ +G I A++L N LD +
Sbjct: 320 VKTGKMIHGLVI--RMGIESYVNLQNALIHMYSGSGEIMDAQKLF-NGSHNLDQISWNSM 376
Query: 180 LGACRIHDNLEAAERAAQQLLELLPD 205
+ C ++E A+ L +++P+
Sbjct: 377 ISGCMKCGSVE----KARALFDVMPE 398
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 20/168 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEV-GMWLHPYIMKKNIEV 59
Y++ ++ E+ALLL++ + + D T ++ AC + LE G +H +++K +
Sbjct: 116 YIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA-VRLLEFGGKEIHDHVLKVGFD- 173
Query: 60 DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
DV LI + A+CG A + F E + D++++ +L G
Sbjct: 174 --------SDVYVQNTLINMYAVCGNMRDARKLFDESPVL----DSVSWNSILAGYVKKG 221
Query: 120 LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
V+E F+ M ++ +I ++ +LG+ G++ +A +L M
Sbjct: 222 DVEEAKLIFDQMPQR-----NIVASNSMIVLLGKMGQVMEAWKLFNEM 264
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 347 bits (889), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 181/400 (45%), Positives = 239/400 (59%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK--KNIE 58
Y S +EAL LFR + + + VT +S+L AC +LGAL++G W+H Y+ K K+++
Sbjct: 337 YTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMK 396
Query: 59 VDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM 96
V L +L K + T A+I AM G + AL F M
Sbjct: 397 NTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRM 456
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
G PD ITFVGVL AC HAGL+ +F+ M + Y + P + HYGC++ + GRAG
Sbjct: 457 TSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGL 516
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+AE L+KNM M D + LLGACRIH +E AE A+ L EL P+N +YV+LSN
Sbjct: 517 FDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNI 576
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+ + +W+ V +IR + + +KK PGC IEVD VVHEF+
Sbjct: 577 YAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEI 636
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
KAGFVP+ SEVL+DMDEE KE L+ H+EKLAI FGL+S PG IRI+KNLRVC
Sbjct: 637 DMRLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVC 696
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+CH+AT +ISK++NRE + DRNRFHHFK+GSCSCKD+W
Sbjct: 697 GNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 84/191 (43%), Gaps = 24/191 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLG-ALEVGMWLHPYIMKKNIEV 59
Y + EEA+ F E++ +T + TM+S+L AC G +L++G W+ +I + +
Sbjct: 235 YAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGS 294
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
++ L L K+V++ +I +AL F M
Sbjct: 295 NIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMM 354
Query: 98 IRGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ P+ +TF+ +L AC++ G +D + H + ++ ++ + L+ + + G
Sbjct: 355 QSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGD 414
Query: 157 IAKAEELIKNM 167
+A A+ + M
Sbjct: 415 LAVAKRIFDCM 425
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 51/103 (49%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
+ ++DV++ A+I A G+ +A+ +F EM+ V P+ T + VL AC+ +G +
Sbjct: 220 IPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQL 279
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ E G+ +I L+ + + G + +A L + +
Sbjct: 280 GNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKI 322
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 177/398 (44%), Positives = 243/398 (61%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + ++A LF +++ G+ KVT+VSLL C GAL++G W+H YI K+ +EVD
Sbjct: 334 YAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVD 393
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L AL +D+ A+I AM G G +AL+ F EM+
Sbjct: 394 CILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMER 453
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+GVKP+ ITF+G+L ACSHAGLV E F M +G+ P IEHYGC+V +LGRAG +
Sbjct: 454 QGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLD 513
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E+IK+MP+ + V G L+ ACR+H N + E AA QLLE+ P+N G V++SN Y+
Sbjct: 514 EAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYA 573
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ +W +R+ M +KK PG +IEV+G VHEF+
Sbjct: 574 AANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRR 633
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+VP+ S VL ++DEEEKETAL H+EKLA+ FGL+S P IRI+KNLRVCND
Sbjct: 634 KLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCND 693
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT ++SK+Y R +V DRNRFHHF+ G CSC D+W
Sbjct: 694 CHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 731
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 59/134 (44%), Gaps = 22/134 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + AL ++ +++ D S+L AC + ++G +H +++KK ++ D
Sbjct: 99 YTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRD 158
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL +DV++ + +I L+ + + ALE EM
Sbjct: 159 VFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNF 218
Query: 99 RGVKPDAITFVGVL 112
V+P + V ++
Sbjct: 219 MQVRPSEVAMVSMV 232
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
+DVM TA++ A ++A F +M+ GV+P +T V +L C+ AG +D
Sbjct: 322 RDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALD 376
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 175/398 (43%), Positives = 244/398 (61%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + C EAL LF E+Q + + VTMVS+L AC LGALE G W+H Y+ +K + +
Sbjct: 297 YTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLT 356
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG AL K+ T TALI +A G+G +ALE F M+
Sbjct: 357 TILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRE 416
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++P +TF+GVL+ACSH+ LV+E HF+ M+ YGI+P +EHYGC+V +LGRAG +
Sbjct: 417 AGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVD 476
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I+ MP+ + + LL +C +H N+ E A +Q++ L P + G YV+LSN Y+
Sbjct: 477 EAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYA 536
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
S+ +WK +R+ M +R I+K PGC LIE+DGVV EF
Sbjct: 537 SAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIG 596
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VPN ++V +++E EKE +++ H+EKLAI FGL+ PG IR+ KNLRVC D
Sbjct: 597 RIKVAGYVPNTADVRLEVEEREKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCAD 656
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+AT +ISKVY+RE VV DRN FHHFK+G+CSC D+W
Sbjct: 657 CHSATKLISKVYDREIVVRDRNIFHHFKDGTCSCNDYW 694
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 25/192 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI----MKKN 56
Y+++ E + +F+ + G+ D+VT+VS++ AC +G ++G W+ ++ + +N
Sbjct: 196 YLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARN 255
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
++ L GM +DV+ +A+I Q +AL F EMQ+
Sbjct: 256 PKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQL 315
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V+P+ +T V VL AC+ G ++ + H + ++ + + LV + G I
Sbjct: 316 ARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGT--ALVDFYAKCGCI 373
Query: 158 AKAEELIKNMPM 169
A E ++MP+
Sbjct: 374 DDAVEAFESMPV 385
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/398 (44%), Positives = 243/398 (61%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + ++A LF +++ G+ KVT+VSLL C GAL++G W+H YI K+ +EVD
Sbjct: 374 YAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVD 433
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L AL +D+ A+I AM G G +AL+ F EM+
Sbjct: 434 CILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMER 493
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+GVKP+ ITF+G+L ACSHAGLV E F M +G+ P IEHYGC+V +LGRAG +
Sbjct: 494 QGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLD 553
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E+IK+MP+ + V G L+ ACR+H N + E AA QLLE+ P+N G V++SN Y+
Sbjct: 554 EAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYA 613
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ +W +R+ M +KK PG +IEV+G VHEF+
Sbjct: 614 AANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRR 673
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+VP+ S VL ++DEEEKETAL H+EKLA+ FGL+S P IRI+KNLRVCND
Sbjct: 674 KLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCND 733
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT ++SK+Y R +V DRNRFHHF+ G CSC D+W
Sbjct: 734 CHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 771
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 22/143 (15%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
+ + EE LF +Q + + +++TM+SL++ C GAL++G LH YI++ V +
Sbjct: 274 IRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSL 333
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
L AL +DVM TA++ A ++A F +M+
Sbjct: 334 ALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTS 393
Query: 100 GVKPDAITFVGVLVACSHAGLVD 122
GV+P +T V +L C+ AG +D
Sbjct: 394 GVRPTKVTIVSLLSLCAVAGALD 416
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 343 bits (881), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 172/399 (43%), Positives = 238/399 (59%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ EAL +F ++Q +G+ D +V +L AC LGALE G W+H Y+ NI +
Sbjct: 200 YVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMT 259
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL K+V+ T +I LAM G+G+ +L F +M+
Sbjct: 260 VFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMES 319
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVKPD I F+G L AC+H GLVD+ FN M YGI+P IEHYGC+V +L R G ++
Sbjct: 320 SGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLS 379
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A ++++ MPM D + G L+ CR H N+E AE + +EL PD G+YV+L N YS
Sbjct: 380 EARDMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVIKHWIELEPDKSGAYVLLGNIYS 439
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+S + + IR LM E+ ++K PGC +E+ GV+H+F+
Sbjct: 440 ASGRHASAREIRNLMREKGVEKTPGCSNVEIKGVIHQFIVGDLSHPRIKDILTKWYEIDS 499
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ G+VP+K EVL D++EEE E+AL+ H+EKLAI F L+S + IRI+KNLRVC
Sbjct: 500 RIRLEEGYVPDKKEVLLDIEEEEMESALSRHSEKLAIAFALISTEDYMPIRIVKNLRVCQ 559
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH T +ISKVY RE +V DR RFH FK+G+CSCKD+W
Sbjct: 560 DCHHVTKLISKVYGREIIVRDRTRFHLFKDGTCSCKDYW 598
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE 123
M ++ ++ +A++ G G +AL F +MQ +GV+PD VGVL AC+ G +++
Sbjct: 185 MPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQ 243
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 343 bits (880), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 173/398 (43%), Positives = 240/398 (60%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + C EAL +F E+Q + + VTMVS+L AC LGALE G W+H YI +K++ +
Sbjct: 348 YTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLT 407
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL ++ T TALI +A G+ +ALE F M
Sbjct: 408 VILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLE 467
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
++P +TF+GVL+ACSH LV+E HF M++ YGI P IEHYGC+V +LGRAG I
Sbjct: 468 ANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLID 527
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I+NMP+ + V LL AC +H N+E E A +Q++ L P + G+Y++LSN Y+
Sbjct: 528 EAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYA 587
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
S +WK +R+ M E+ ++K PGC LIE++G + EF
Sbjct: 588 SVGQWKNAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIE 647
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G++PN ++ D+DE EK+ +++ H+EKLAI FGL+ PG IR+ KNLRVC D
Sbjct: 648 NIKMVGYIPNTADARLDVDEYEKQVSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCID 707
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+AT +ISKVYNRE +V DRNRFHHFK+G CSC D+W
Sbjct: 708 CHSATKLISKVYNREIIVRDRNRFHHFKDGLCSCNDYW 745
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ +E + +F+ + D+VT++S+ AC LG +G W+ Y +K +
Sbjct: 247 YVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRS 306
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L AL +DV+ +A+I + +AL F EMQ
Sbjct: 307 RNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQG 366
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
V P+ +T V VL AC+ G ++
Sbjct: 367 TEVNPNDVTMVSVLSACAVLGALE 390
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 183/398 (45%), Positives = 243/398 (61%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL LFRE+ +G+ D TMVSLL AC LGAL +G H Y++K ++ +
Sbjct: 216 YALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGN 275
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ G AL K V++ T+LIV LA+ G G +ALE F E++
Sbjct: 276 LHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELER 335
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+G+ P ITFVGVL ACSH G+VDE +F M E+YGI P IEHYGC+V +LGRAG +
Sbjct: 336 KGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVK 395
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E I+NMPM + V LLGAC IH +L E A QLL+L P + G YV+LSN Y+
Sbjct: 396 QAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYA 455
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
S ++W V ++R M +KK PG L+E+ +HEFV
Sbjct: 456 SEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITK 515
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VP+ S VL D++EEEKETAL+ H+EK+AI F L++ G+ IR++KNLRVC D
Sbjct: 516 LLKLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCAD 575
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A +ISKV++RE VV DR+RFHHFK+G CSCKD+W
Sbjct: 576 CHLAIKLISKVFDREIVVRDRSRFHHFKDGHCSCKDYW 613
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 25/190 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E AL L+R++ + D T LL A L + G +H ++ E
Sbjct: 115 YAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESL 174
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + MA ++++T ++I A+ G+ N+AL F EM +
Sbjct: 175 VFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGL 234
Query: 99 RGVKPDAITFVGVLVACSHAG-LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
RGV+PD T V +L AC+ G L R +H ++ K G+ ++ L+ + + G I
Sbjct: 235 RGVEPDGFTMVSLLSACAELGALALGRRAHVYMV--KVGLDGNLHAGNALLDLYAKCGSI 292
Query: 158 AKAEELIKNM 167
+A ++ M
Sbjct: 293 RQAHKVFDEM 302
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 171/398 (42%), Positives = 245/398 (61%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y +++ ++A+ LF+ +Q +G+ ++ MVS++ +C HLGALE+G H Y++K + ++
Sbjct: 226 YAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLN 285
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ LG AL +D ++ TALI LAM G ++L+YF M
Sbjct: 286 LILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVE 345
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ P ITF VL ACSH GLV+ F M + + P +EHYGC+V +LGRAG++
Sbjct: 346 AGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLE 405
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE + MP+ + V G LLGACRIH N E ER + L++LLP + G YV+LSN Y+
Sbjct: 406 EAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYA 465
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++++W+KV +R++M + +KKPPG LIE+DG VH+F
Sbjct: 466 NAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTIGDSSHPEMDKIERMWEEILM 525
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+ N ++ LFD+DEEEKE+AL+ H+EKLAI FG++ G IRI+KNLRVC D
Sbjct: 526 RIRAAGYRGNTADALFDIDEEEKESALHRHSEKLAIAFGMMRSEAGTPIRIVKNLRVCED 585
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTAT +ISKV+ RE +V DRNRFHHF+ G CSC D+W
Sbjct: 586 CHTATKLISKVFGRELIVRDRNRFHHFRQGLCSCMDYW 623
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 58/216 (26%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
++A + + Q +GL D +T L+ +CT L + +G H +I+K E DV + +L
Sbjct: 101 DQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSL 160
Query: 68 ----------------------KDVMTLTALIVVLAMCG--------------------- 84
DV++ T++I CG
Sbjct: 161 VHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWS 220
Query: 85 -------QGN---KALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD--ERISHFNLMS 132
Q N KA+E F +Q +GV+ + V V+ +C+H G ++ ER + +
Sbjct: 221 TMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVV-- 278
Query: 133 EKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
K G+ ++ LV + R G I KA + +++P
Sbjct: 279 -KNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLP 313
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 176/393 (44%), Positives = 243/393 (61%), Gaps = 48/393 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK------------ 55
+EALLLF+E+ G + + VTM+S+L AC HLGA+++G W+H YI K+
Sbjct: 299 KEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRT 358
Query: 56 ----------NIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
+IE V M K + + A+I AM G+ N A + F M+ G++P
Sbjct: 359 SLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEP 418
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
D IT VG+L ACSH+GL+D F +++ Y I P +EHYGC++ +LG AG +AEE+
Sbjct: 419 DDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEI 478
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
I MPM D + LL AC++H NLE AE AQ+L+E+ P+N GSYV+LSN Y+++ +W
Sbjct: 479 IHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRW 538
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KA 259
+ V RIRE++ + +KK PGC IE+D VVHEF+ +A
Sbjct: 539 EDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEA 598
Query: 260 GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
GFVP+ SEVL +M+EE KE AL H+EKLAI FGL+S PG + ++KNLRVC +CH AT
Sbjct: 599 GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTVVKNLRVCRNCHEAT 658
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ISK+Y RE V DR RFHHF++G CSC D+W
Sbjct: 659 KLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 691
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 24/191 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHP---------- 50
YVE+ EEAL LF+E+ + D+ T+VS+L AC G++E+G +H
Sbjct: 190 YVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGS 249
Query: 51 -----------YIMKKNIEVDVGL--GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
Y ++E+ GL G++ KDV++ LI +AL F EM
Sbjct: 250 SLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEML 309
Query: 98 IRGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
G P+ +T + VL AC+H G +D R H + G+ L+ + + G
Sbjct: 310 RSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGD 369
Query: 157 IAKAEELIKNM 167
I A ++ +M
Sbjct: 370 IEAAHQVFNSM 380
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 173/399 (43%), Positives = 240/399 (60%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ E+A+ F +Q +G+ ++ MV ++ +C HLGAL +G H Y+M+ + ++
Sbjct: 224 YARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLN 283
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ LG A+ KDV+ TALI LAM G KAL YF EM
Sbjct: 284 LILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAK 343
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+G P ITF VL ACSHAG+V+ + F M +G+ P +EHYGC+V +LGRAG++
Sbjct: 344 KGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLR 403
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
KAE+ + MP+ + + LLGACRIH N+E ER + LLE+ P+ G YV+LSN Y+
Sbjct: 404 KAEKFVLKMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYA 463
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ KWK V +R++M ++ ++KPPG LIE+DG VHEF
Sbjct: 464 RANKWKDVTVMRQMMKDKGVRKPPGYSLIEIDGKVHEFTIGDKTHPEIEKIERIWEDIIL 523
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
AG+V N +E +FD+DEEEKE AL+ H+EKLAI +G++ IRI+KNLRVC
Sbjct: 524 PKIKLAGYVGNTAETMFDIDEEEKEGALHRHSEKLAIAYGIMKIRAPTPIRIVKNLRVCE 583
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTAT +ISKV+ E +V DRNRFHHFK G+CSC D+W
Sbjct: 584 DCHTATKLISKVFEVELIVRDRNRFHHFKEGTCSCMDYW 622
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 175/399 (43%), Positives = 248/399 (62%), Gaps = 50/399 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+++ EAL +F ++Q + + K + S+L AC +LGAL+ G W+H Y + +I++D
Sbjct: 277 YIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLD 336
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG +L K+V + A+I LAM G+ A++ F +M I
Sbjct: 337 GVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDI 396
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
P+ ITFVGVL AC+H GLV + ++ FN M ++YG+ P IEHYGC+V +LGRAG +
Sbjct: 397 ---NPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLT 453
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE+++ ++P V G LLGACR H N+E ER + LLEL P N G Y +LSN Y+
Sbjct: 454 EAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYA 513
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVD-GVVHEFVKA------------------ 259
+ +W++V +R+LM ER IK PG +I++ G VH+F+
Sbjct: 514 KAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVK 573
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+ P+ S+VLFD+DEEEKETA+ H+EKLAI FGL++ PG IRI+KNLRVC
Sbjct: 574 ERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCE 633
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+AT +IS+VYNRE +V DR R+HHF+NG+CSCKDFW
Sbjct: 634 DCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 672
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 88 KALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERIS-HFNLMSEKYGIRPSIEHYGC 146
KA+ +YEM + +P+ T+ VL ACS AG+V E + H +L+ K+G+
Sbjct: 120 KAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLV--KHGLGGDGHILSS 177
Query: 147 LVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPD 205
+ + GR+ +A ++ + +D ++ +E AA++L E +PD
Sbjct: 178 AIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVE----AARELFEGMPD 232
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 340 bits (872), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 175/399 (43%), Positives = 248/399 (62%), Gaps = 50/399 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+++ EAL +F ++Q + + K + S+L AC +LGAL+ G W+H Y + +I++D
Sbjct: 278 YIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLD 337
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG +L K+V + A+I LAM G+ A++ F +M I
Sbjct: 338 GVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDI 397
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
P+ ITFVGVL AC+H GLV + ++ FN M ++YG+ P IEHYGC+V +LGRAG +
Sbjct: 398 Y---PNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLT 454
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE+++ ++P V G LLGACR H N+E ER + LLEL P N G Y +LSN Y+
Sbjct: 455 EAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYA 514
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVD-GVVHEFVKA------------------ 259
+ +W++V +R+LM ER IK PG +I++ G VH+F+
Sbjct: 515 KAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVK 574
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+ P+ S+VLFD+DEEEKETA+ H+EKLAI FGL++ PG IRI+KNLRVC
Sbjct: 575 ERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCE 634
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+AT +IS+VYNRE +V DR R+HHF+NG+CSCKDFW
Sbjct: 635 DCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 673
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Query: 79 VLAMCGQGN---KALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERIS-HFNLMSEK 134
++ +C + N KA+ +YEM + +P+ T+ VL ACS +G+V E + H +L+ K
Sbjct: 109 MIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLV--K 166
Query: 135 YGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAER 194
+G+ + + GR+ +A ++ + +D ++ +E
Sbjct: 167 HGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVE---- 222
Query: 195 AAQQLLELLPD 205
AA++L E +PD
Sbjct: 223 AARELFEGMPD 233
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 339 bits (870), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 168/398 (42%), Positives = 238/398 (59%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV +A+ LFRE+Q G+ D+VT++ +L A T LGALE+ W+ ++ ++ I
Sbjct: 205 YVRGGLSSDAVELFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVEREGIGKS 264
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V L GM + V++ T++I LAM G+G +A+ F EM++
Sbjct: 265 VTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKV 324
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV PD + F+GVL ACSHAG+VDE +F+ M +YGI P IEHYGC+V + GRAG +
Sbjct: 325 AGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVE 384
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E ++ MP+ + + L+ ACR H LE E + LL P + +Y++LSN ++
Sbjct: 385 RAMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIMLSNVFA 444
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+++WK+ IR M++R IKK PGC ++E+DG VHEF+
Sbjct: 445 LTQRWKEKSEIRREMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDIYRMVEEMAR 504
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G + SEVL D+DEE+KE AL H+EKLAI F L+ PG +R++KNLRVC+D
Sbjct: 505 ELRRVGHIAATSEVLLDLDEEDKEGALQWHSEKLAIAFALLRTPPGTQVRVVKNLRVCSD 564
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A IS+VY RE VV DR+RFH FK+GSCSCKDFW
Sbjct: 565 CHAAIKCISQVYRREIVVRDRSRFHRFKDGSCSCKDFW 602
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 68/168 (40%), Gaps = 26/168 (15%)
Query: 25 DKVTMVSLLLACTHL-GALEVGMWLHPYIMKKNIEVD-------------VGLG------ 64
+K T LL AC L G+ +VG+ H +K D G G
Sbjct: 125 NKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTLIHMYSCFGGGFLGDAR 184
Query: 65 -----MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
M + +T +A+I G + A+E F EMQ GV+ D +T +GVL A + G
Sbjct: 185 NVFDRMPKESAVTWSAMIGGYVRGGLSSDAVELFREMQANGVQADEVTVIGVLAAATDLG 244
Query: 120 LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ E E+ GI S+ L+ L + G + A + + M
Sbjct: 245 AL-ELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGM 291
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 175/398 (43%), Positives = 239/398 (60%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL LF+E+Q G+ D+ +VS + ACTHL L++G W+H YI + ++V+
Sbjct: 378 YAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVN 437
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V L L K V T A+I+ LAM G ++L F +M+
Sbjct: 438 VILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKK 497
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G P+ ITF+GVL AC H GLV++ +FN M ++ I +I+HYGC+V +LGRAG +
Sbjct: 498 TGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLK 557
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AEELI +MPMA D G LLGACR H + E ER ++L++L PD+ G +V+LSN Y+
Sbjct: 558 EAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYA 617
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
S W V IR +MA+ + K PGC +IE +G VHEF+
Sbjct: 618 SKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLDVVAA 677
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VP SEV D+DEEEKETAL H+EKLA+ FGL++ P IR+ KNLR+CND
Sbjct: 678 KLKIEGYVPTTSEVSLDIDEEEKETALFRHSEKLAVAFGLITISPPTPIRVTKNLRICND 737
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHT +ISK ++R+ VV DR+RFHHFK+G+CSC DFW
Sbjct: 738 CHTVVKLISKAFDRDIVVRDRHRFHHFKHGACSCMDFW 775
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 72/176 (40%), Gaps = 54/176 (30%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EEAL+LF E++ G+ D+V +VS L AC+ + +E+G W+H +K +E
Sbjct: 245 YEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDY 304
Query: 61 VGL-----------------------GMALKDVMTLTALIVVLAMCGQ------------ 85
V L G L D+++ ++I CG
Sbjct: 305 VSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMP 364
Query: 86 -------------------GNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
++AL F EMQ+ GV+PD V + AC+H +D
Sbjct: 365 EKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLD 420
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 175/402 (43%), Positives = 239/402 (59%), Gaps = 50/402 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y S EEAL+LF + + +T + VT +++L AC LGAL++G W+H YI K
Sbjct: 335 YCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTG 394
Query: 56 ---------------------NIEVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFY 94
+ V M + + + A+I LAM G +AL F
Sbjct: 395 NVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFE 454
Query: 95 EMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRA 154
EM G +PD ITFVGVL AC+ AG V+ +F+ M++ YGI P ++HYGC++ +L R+
Sbjct: 455 EMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARS 514
Query: 155 GRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILS 214
G+ +A+ L+ NM M D + G LL ACRIH +E E A++L EL P+N G+YV+LS
Sbjct: 515 GKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLS 574
Query: 215 NRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV----------------- 257
N Y+ + +W V +IR + ++ +KK PGC IE+DGVVHEF+
Sbjct: 575 NIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLD 634
Query: 258 -------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLR 310
+ GFVP+ SEVL+DMDEE KE AL H+EKLAI FGL+S PG IRI+KNLR
Sbjct: 635 EVDRLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGSTIRIVKNLR 694
Query: 311 VCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
VC +CH+AT +ISK++NRE + DRNRFHHFK+G CSC D W
Sbjct: 695 VCRNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDRW 736
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI----MKKN 56
YV+ EEAL F +Q ++ ++ TMVS+L AC HL +LE+G W+ ++ KN
Sbjct: 234 YVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKN 293
Query: 57 IEV------------DVGL------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+++ ++G GM KDV+ +I +AL F M
Sbjct: 294 LQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLR 353
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
V P+ +TF+ VL AC+ G +D
Sbjct: 354 ENVTPNDVTFLAVLPACASLGALD 377
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 73/212 (34%), Gaps = 54/212 (25%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACT-----------HLGALEVGMWLHPYIMKKNI 57
+L LF ++ H GL + T SL +C H AL++ + LHP++ I
Sbjct: 110 SSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLI 169
Query: 58 EVDVGLG------------------------------------------MALKDVMTLTA 75
+ +G + KDV++ A
Sbjct: 170 HMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNA 229
Query: 76 LIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKY 135
+I G+ +AL F MQ V P+ T V VL AC H + E
Sbjct: 230 MIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSL-ELGKWIGSWVRDR 288
Query: 136 GIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
G +++ LV + + G I A +L M
Sbjct: 289 GFGKNLQLVNALVDMYSKCGEIGTARKLFDGM 320
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 168/398 (42%), Positives = 238/398 (59%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV +A+ LFRE+Q G+ D+VT++ +L A T LGALE+ W+ ++ ++ I
Sbjct: 205 YVRGGLSSDAVDLFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVEREGIGKS 264
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V L GM + V++ T++I LAM G+G +A+ F EM++
Sbjct: 265 VTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKV 324
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV PD + F+GVL ACSHAG+VDE +F+ M +YGI P IEHYGC+V + GRAG +
Sbjct: 325 AGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVE 384
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E ++ MP+ + + L+ ACR H LE E + LL P + +Y++LSN ++
Sbjct: 385 RAMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIMLSNVFA 444
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+++WK+ IR M++R IKK PGC ++E+DG VHEF+
Sbjct: 445 LTQRWKEKSEIRREMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDIYRMVEEMAR 504
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G + SEVL D+DEE+KE AL H+EKLAI F L+ PG +R++KNLRVC+D
Sbjct: 505 ELRRVGHIAATSEVLLDLDEEDKEGALQWHSEKLAIAFALLRTPPGTQVRVVKNLRVCSD 564
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A IS+VY RE VV DR+RFH FK+GSCSCKDFW
Sbjct: 565 CHAAIKCISQVYRREIVVRDRSRFHRFKDGSCSCKDFW 602
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 26/168 (15%)
Query: 25 DKVTMVSLLLACTHL-GALEVGMWLHPYIMKKNIEVD-------------VGLG------ 64
+K T LL AC L G+ +VG+ H +K D G G
Sbjct: 125 NKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTLIHMYSCFGGGFLGDAR 184
Query: 65 -----MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
M + +T +A+I G + A++ F EMQ GV+ D +T +GVL A + G
Sbjct: 185 NVFDRMPKESAVTWSAMIGGYVRGGLSSDAVDLFREMQANGVQADEVTVIGVLAAATDLG 244
Query: 120 LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ E E+ GI S+ L+ L + G + A + + M
Sbjct: 245 AL-ELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGM 291
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/398 (43%), Positives = 238/398 (59%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ + EA LF ++ + + DK S+L ACT LGALE G W+H YI K IE+D
Sbjct: 172 YVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELD 231
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L + K + + +I LAM G+G A+E F EM+
Sbjct: 232 SKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMER 291
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V PD ITFV VL AC+H+GLV+E +F M+E G++P +EH+GC+V +LGRAG +
Sbjct: 292 EMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLE 351
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI MP+ D VLG L+GACRIH N E E+ ++++EL P N G YV+L+N Y+
Sbjct: 352 EARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYA 411
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
S+ +W+ V ++R+LM +R +KK PG +IE + V EF+
Sbjct: 412 SAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILE 471
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VP+ VL D+DEEEKE L H+EKLAI FGL+ PG +RI KNLR+C D
Sbjct: 472 TIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRD 531
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A+ +ISKVY+RE ++ DRNRFHHF+ G CSCKD+W
Sbjct: 532 CHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 569
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/398 (42%), Positives = 242/398 (60%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV + EAL +FRE+Q+ ++ D+ TMVS++ AC LGALE+G W+ Y+ ++ I++D
Sbjct: 230 YVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMD 289
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL +D T TA+I+ LA+ G +A+E F+ M
Sbjct: 290 AFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIR 349
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
PD +TF+GVL AC+HAGLVD+ F M E Y I P++ HYGC++ +LGRAG+I
Sbjct: 350 VSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKIT 409
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I MPM + + G LL ACR+H N E E A++LLEL P+N Y++LSN Y+
Sbjct: 410 EALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYA 469
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+W+ V+R+R + E+ IKK PGC LIE+DG++HEFV
Sbjct: 470 KCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMDGIIHEFVAGDQSHPMSKEIYSKLESIIS 529
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P+ +EV ++ E+EK+ L H+EKLAI F L+S P +IRI+KNLR+C D
Sbjct: 530 DLNNVGYFPDVTEVFVEVAEKEKKKVLYWHSEKLAIAFALLSSKPNTVIRIVKNLRMCLD 589
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A +IS++Y RE VV DR RFHHF++G CSCKD+W
Sbjct: 590 CHNAIKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 627
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 24/185 (12%)
Query: 14 FREVQHKGLTGDKVTMVSLLLACTHLGALEV--GMWLHPYIMKKNIEVDVGLGMALKDVM 71
F ++ G VT VS+L AC G +V GM +H + VG G+ L D+
Sbjct: 110 FVDMARAGAAPTPVTYVSVLSACGK-GTRDVLLGMQVHGRV--------VGSGV-LPDLR 159
Query: 72 TLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLM 131
AL+ + A C A + F MQ+R V +++ +L + G VDE F+ M
Sbjct: 160 VENALVDMYAECADMGSAWKVFDGMQVRSV----VSWTSLLSGLARLGQVDEARDLFDRM 215
Query: 132 SEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP---MALDHFVLGGLLGACRIHDN 188
E+ + + ++ A R +A E+ + M ++ D F + ++ AC
Sbjct: 216 PERDTV-----SWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGA 270
Query: 189 LEAAE 193
LE E
Sbjct: 271 LEMGE 275
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
M +D ++ TA+I + +ALE F EMQ V D T V V+ AC+ G + E
Sbjct: 215 MPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGAL-EM 273
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ + GI+ L+ + + G I +A ++ K M
Sbjct: 274 GEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGM 316
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/398 (43%), Positives = 238/398 (59%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ + EA LF ++ + + DK S+L ACT LGALE G W+H YI K IE+D
Sbjct: 227 YVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELD 286
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L + K + + +I LAM G+G A+E F EM+
Sbjct: 287 SKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMER 346
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V PD ITFV VL AC+H+GLV+E +F M+E G++P +EH+GC+V +LGRAG +
Sbjct: 347 EMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLE 406
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI MP+ D VLG L+GACRIH N E E+ ++++EL P N G YV+L+N Y+
Sbjct: 407 EARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYA 466
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
S+ +W+ V ++R+LM +R +KK PG +IE + V EF+
Sbjct: 467 SAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILE 526
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VP+ VL D+DEEEKE L H+EKLAI FGL+ PG +RI KNLR+C D
Sbjct: 527 TIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRD 586
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A+ +ISKVY+RE ++ DRNRFHHF+ G CSCKD+W
Sbjct: 587 CHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 624
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 21/186 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ + ++ + HK ++ +K T L+ AC A+E G +H +++K
Sbjct: 95 YLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLK------ 148
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
G G D +L LI + +A F M R D +++ ++ S G
Sbjct: 149 FGFG---ADGFSLNNLIHMYVNFQSLEQARRVFDNMPQR----DVVSWTSLITGYSQWGF 201
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPM---ALDHFVLG 177
VD+ F LM E+ + + ++ ++ R+ +A L M + LD FV
Sbjct: 202 VDKAREVFELMPERNSVS-----WNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAA 256
Query: 178 GLLGAC 183
+L AC
Sbjct: 257 SMLSAC 262
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 168/399 (42%), Positives = 248/399 (62%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y +++ E+A+ LF ++ +G+ ++ MVS++ +C HLGALE G H Y++K ++ V+
Sbjct: 226 YAKNNCFEKAIDLFELMKREGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVN 285
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ LG AL KD ++ +++I LA+ G +KA+ YF +M
Sbjct: 286 LILGTALVDMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVR 345
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G P IT VL ACSH GLVD+ + + M YGI P +EHYGC+V +LGRAG++A
Sbjct: 346 LGFSPRDITLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLA 405
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE I MP+ + +LG LLGAC+I+ N E AER L+E+ P++ G YV+LSN Y+
Sbjct: 406 EAENFILKMPVKPNAPILGALLGACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYA 465
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ +W+K++ +R++M E+ +KKPPG LIE+DG +++F
Sbjct: 466 CAGQWEKLESLRDIMKEKLVKKPPGWSLIEIDGKINKFSMGDDQKHPEMGKIKRLWEEIL 525
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+ N + FD+DEEEKETA+++H+EKLAI +G++ G IRI+KNLRVC
Sbjct: 526 GKIRLIGYKGNTGDAFFDVDEEEKETAIHMHSEKLAIAYGMMKTKTGTTIRIVKNLRVCE 585
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTAT +IS+VY RE +V DRNRFHHF+NG CSC+D+W
Sbjct: 586 DCHTATKLISEVYGREFIVRDRNRFHHFRNGLCSCRDYW 624
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 180/399 (45%), Positives = 239/399 (59%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y + EAL +F V+H G+ + VT+ ++LLAC H GAL G +H ++K ++E
Sbjct: 1327 YAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEY 1386
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+V +G ++ K+V + TA++ M G+ +AL+ FY+M
Sbjct: 1387 NVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMV 1446
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GVKP+ ITFV VL ACSHAGLV+E FN M KY I P IEHYGC+V + GRAG +
Sbjct: 1447 RAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCL 1506
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A LIK M M D V G LLGACRIH N++ E AAQ+L EL PDN G YV+LSN Y
Sbjct: 1507 NEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLY 1566
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ + +W V+R+R LM R + KPPG L+E+ G VH F+
Sbjct: 1567 ADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLT 1626
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
K G+VPN + VL D+DEEEKE L +H+EKLA+ FG+++ PG I IIKNLRVC
Sbjct: 1627 LELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCG 1686
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHT +ISK+ +R+ VV D RFHHFK+G CSC D+W
Sbjct: 1687 DCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 101/189 (53%), Gaps = 22/189 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ + EEAL LF+ +Q + + ++ TMVSL+ ACT +G L +G +H Y +K IE+
Sbjct: 232 YIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIG 291
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL K + T ++I L + G G +AL F EM+
Sbjct: 292 VYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMER 351
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
VKPDAITF+GVL AC H V E ++F M++ YGI P EHY C+ + R+ +
Sbjct: 352 VNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLD 411
Query: 159 KAEELIKNM 167
+A + K +
Sbjct: 412 EAFKSTKEV 420
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 33/151 (21%)
Query: 1 YVEDSACEEALLLFREVQHK--------GLTGDKVTMVSLLLACTHLGALEVGMWLHPYI 52
YV++ + ALLLF++ + + D V MVS+L AC+ + + +H ++
Sbjct: 1218 YVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFV 1277
Query: 53 MKKNIEVDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKAL 90
+KK + +G+G L KD ++ ++I V A G +AL
Sbjct: 1278 VKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEAL 1337
Query: 91 EYFYEMQIR--GVKPDAITFVGVLVACSHAG 119
E F+ M +R GV+ +A+T VL+AC+HAG
Sbjct: 1338 EVFHGM-VRHVGVRYNAVTLSAVLLACAHAG 1367
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 64/219 (29%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL---- 63
E+AL+L++ + +G+ DK T ++ ACT+ ++++G +H ++K DV +
Sbjct: 107 EQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNL 166
Query: 64 ------------------GMALKDVMTLTALIVVLAMCG--------------------- 84
M +++V++ T +I L CG
Sbjct: 167 IDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWT 226
Query: 85 ----------QGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSE 133
Q +ALE F MQ + P+ T V ++ AC+ G++ R H
Sbjct: 227 AMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIH------ 280
Query: 134 KYGIRPSIE---HYG-CLVYILGRAGRIAKAEELIKNMP 168
Y I+ IE + G L+ + + G I A E+ + MP
Sbjct: 281 DYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP 319
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 180/399 (45%), Positives = 239/399 (59%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y + EAL +F V+H G+ + VT+ ++LLAC H GAL G +H ++K ++E
Sbjct: 2200 YAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEY 2259
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+V +G ++ K+V + TA++ M G+ +AL+ FY+M
Sbjct: 2260 NVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMV 2319
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GVKP+ ITFV VL ACSHAGLV+E FN M KY I P IEHYGC+V + GRAG +
Sbjct: 2320 RAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCL 2379
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A LIK M M D V G LLGACRIH N++ E AAQ+L EL PDN G YV+LSN Y
Sbjct: 2380 NEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLY 2439
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ + +W V+R+R LM R + KPPG L+E+ G VH F+
Sbjct: 2440 ADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLT 2499
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
K G+VPN + VL D+DEEEKE L +H+EKLA+ FG+++ PG I IIKNLRVC
Sbjct: 2500 LELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCG 2559
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHT +ISK+ +R+ VV D RFHHFK+G CSC D+W
Sbjct: 2560 DCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 2598
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 31/222 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ + EEAL LF+ +Q + + ++ TMVSL+ ACT +G L +G +H Y +K IE+
Sbjct: 232 YIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIG 291
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL K + T ++I L + G G +AL F EM+
Sbjct: 292 VYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMER 351
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
VKPDAITF+GVL AC H V E ++F M++ YGI P EHY C+ + R+ +
Sbjct: 352 VNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLD 411
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLL 200
+A + K +G L + I + A + A QLL
Sbjct: 412 EAFKSTKE---------VGSLANSPSICFDARAKQVAWTQLL 444
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 33/151 (21%)
Query: 1 YVEDSACEEALLLFREVQHK--------GLTGDKVTMVSLLLACTHLGALEVGMWLHPYI 52
YV++ + ALLLF++ + + D V MVS+L AC+ + + +H ++
Sbjct: 2091 YVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFV 2150
Query: 53 MKKNIEVDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKAL 90
+KK + +G+G L KD ++ ++I V A G +AL
Sbjct: 2151 VKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEAL 2210
Query: 91 EYFYEMQIR--GVKPDAITFVGVLVACSHAG 119
E F+ M +R GV+ +A+T VL+AC+HAG
Sbjct: 2211 EVFHGM-VRHVGVRYNAVTLSAVLLACAHAG 2240
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 64/219 (29%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL---- 63
E+AL+L++ + +G+ DK T ++ ACT+ ++++G +H ++K DV +
Sbjct: 107 EQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNL 166
Query: 64 ------------------GMALKDVMTLTALIVVLAMCG--------------------- 84
M +++V++ T +I L CG
Sbjct: 167 IDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWT 226
Query: 85 ----------QGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSE 133
Q +ALE F MQ + P+ T V ++ AC+ G++ R H
Sbjct: 227 AMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIH------ 280
Query: 134 KYGIRPSIE---HYG-CLVYILGRAGRIAKAEELIKNMP 168
Y I+ IE + G L+ + + G I A E+ + MP
Sbjct: 281 DYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP 319
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 172/398 (43%), Positives = 235/398 (59%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL LF E+Q +G+ D +VS+L AC H ALE G +H Y ++ E +
Sbjct: 398 YSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESN 457
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G L +DV++ T +I+ + G G AL F +MQ
Sbjct: 458 VVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQE 517
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G K D I F +L ACSHAGLVD+ + +F M YG+ P +EHY CLV +LGRAG +
Sbjct: 518 TGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLD 577
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +IKNM + D V G LLGACRIH N+E E+AA+ L EL PDN G YV+LSN Y+
Sbjct: 578 EANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYA 637
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+++W+ V ++R++M E+ +KK PGC ++ V V F+
Sbjct: 638 EAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYE 697
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
KAG+VPN + L D++EE KE L+ H+EKLAI+FG+++ PG+ IRI+KNLRVC+D
Sbjct: 698 QMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGIINTSPGIPIRIMKNLRVCSD 757
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT ISK+ RE +V D NRFHH KNG CSC D+W
Sbjct: 758 CHNATKFISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 31/194 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL LF E+Q G+ + T+VS++ C HL ALE G +H Y ++ IE D
Sbjct: 196 YSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESD 255
Query: 61 V----GL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V GL M ++DV + A+I ++ Q ++AL +F MQ+
Sbjct: 256 VLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQV 315
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHY----GCLVYILGRA 154
RG+KP++IT V VL AC+H +++ Y IR E LV + +
Sbjct: 316 RGIKPNSITMVSVLPACAHLFALEQ-----GQQIHGYAIRSGFESNDVVGNALVNMYAKC 370
Query: 155 GRIAKAEELIKNMP 168
G + A +L + MP
Sbjct: 371 GNVNSAYKLFERMP 384
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 23/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y +S EAL F +Q +G+ + +TMVS+L AC HL ALE G +H Y ++ E +
Sbjct: 297 YSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESN 356
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL K+V+ A+I + G ++AL F EMQ
Sbjct: 357 DVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQA 416
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+G+KPD+ V VL AC+H L E+ + + + G ++ LV I + G +
Sbjct: 417 QGIKPDSFAIVSVLPACAHF-LALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVN 475
Query: 159 KAEELIKNMP 168
A++L + MP
Sbjct: 476 TAQKLFERMP 485
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 23/191 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ +AL L+ ++Q G+ DK+ +S++ AC L+ G +H I+ + E D
Sbjct: 95 YVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESD 154
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL +DV++ A+I + GQ +AL F EMQ+
Sbjct: 155 VIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQV 214
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KP++ T V V+ C+H L E+ + + + GI + LV + + G +
Sbjct: 215 NGIKPNSSTLVSVMPVCAHL-LALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVN 273
Query: 159 KAEELIKNMPM 169
A +L + MP+
Sbjct: 274 TAHKLFERMPI 284
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 174/391 (44%), Positives = 244/391 (62%), Gaps = 50/391 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL +F ++Q + + K + S+L AC +LGAL+ G W+H Y + +I++D LG +L
Sbjct: 237 EALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLV 296
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
K+V + A+I LAM G+ A++ F +M I P+ I
Sbjct: 297 DMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDI---NPNEI 353
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFVGVL AC+H GLV + ++ FN M ++YG+ P IEHYGC+V +LGRAG + +AE+++ +
Sbjct: 354 TFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSS 413
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
+P V G LLGACR H N+E ER + LLEL P N G Y +LSN Y+ + +W++V
Sbjct: 414 IPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEV 473
Query: 227 KRIRELMAERNIKKPPGCILIEVD-GVVHEFVKA------------------------GF 261
+R+LM ER IK PG +I++ G VH+F+ G+
Sbjct: 474 GEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGY 533
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P+ S+VLFD+DEEEKETA+ H+EKLAI FGL++ PG IRI+KNLRVC DCH+AT +
Sbjct: 534 EPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKL 593
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS+VYNRE +V DR R+HHF+NG+CSCKDFW
Sbjct: 594 ISQVYNREIIVRDRIRYHHFRNGACSCKDFW 624
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 31/214 (14%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
+E++ +A+LL+ E+ +K T ++L AC+ G + G+ +H +++K + D
Sbjct: 134 IENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDG 193
Query: 62 G-LGMALKDVMTLTALI-----------VVLAMCGQGNK-----ALEYFYEMQIRGVKPD 104
L A++ + L+ V A+C K ALE F++MQ ++P
Sbjct: 194 HILSSAIRMYASFGRLVEARRILDDKGGEVDAVCMPDRKGCFMEALEIFHQMQKEKIRPR 253
Query: 105 AITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYG----CLVYILGRAGRIAK 159
VL AC++ G +D+ R H Y R SI+ G LV + + GRI
Sbjct: 254 KFVLPSVLSACANLGALDQGRWIH------TYAKRNSIQLDGVLGTSLVDMYAKCGRIDL 307
Query: 160 AEELIKNMP---MALDHFVLGGLLGACRIHDNLE 190
A E+ + M ++ + ++GGL R D ++
Sbjct: 308 AWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAID 341
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 337 bits (864), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 173/398 (43%), Positives = 247/398 (62%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV +A+ LFRE+Q KG+ D++TMVS+L ACT LGALE+G W+ Y+ K+ ++ +
Sbjct: 90 YVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLGALELGKWVESYVEKERVQKN 149
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V L AL +++++ T++I LAM G+G +A+ F EM
Sbjct: 150 VELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVR 209
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV PD + F+G+L ACSH+GLVD+ +F+ M + + I P IEHYGC+V +L RAG +
Sbjct: 210 SGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVK 269
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + ++ MP+ + V L+ ACR H L+ E+ +QL+ P + +YV+LSN Y+
Sbjct: 270 EALKFVQEMPIDPNPVVWRTLINACRAHGELKLGEKITRQLIRNEPMHESNYVLLSNIYA 329
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
W+K RIRE M + +KK PG +IE+D ++EFV
Sbjct: 330 KMSDWEKKTRIREAMDMKGMKKIPGSTMIELDNEIYEFVAGDKSHAQSKEIYEMVDEMGK 389
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG++P +EVL D+D+E+KE LN H+EKLAI F L++ PG LIRI+KNLRVC+D
Sbjct: 390 EMKRAGYMPTTTEVLLDIDDEDKEDTLNRHSEKLAIAFALLNTPPGTLIRIVKNLRVCDD 449
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A+ ISK+YNRE VV DRNRFHHFKNG CSC+DFW
Sbjct: 450 CHSASKFISKIYNREIVVRDRNRFHHFKNGLCSCRDFW 487
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 27/169 (15%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI--EVDV----------------GLGMA 66
+K T +L AC +G L +G +H +MK EV+V G+ A
Sbjct: 9 NKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEFA 68
Query: 67 LK--------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHA 118
K D ++ +A+I G+ + A+ F EMQI+GV PD IT V VL AC+
Sbjct: 69 RKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGL 128
Query: 119 GLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
G + E EK ++ ++E L+ + + G + KA L ++M
Sbjct: 129 GAL-ELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSM 176
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 176/398 (44%), Positives = 240/398 (60%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y A+ LFRE+Q G+ D++TMVS+L AC LGALE+G WL YI +KNI
Sbjct: 308 YARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRS 367
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V L AL D +++ T++IV LAM G+G +A+ F EM
Sbjct: 368 VELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMME 427
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+GV PD + F+GVL ACSH+GLVD+ +FN M + I P IEHYGC+V +L RAGR+
Sbjct: 428 QGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVN 487
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E ++ MP+ + + ++ AC L+ E A++L+ P + +YV+LSN Y+
Sbjct: 488 EALEFVRAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNIYA 547
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+W+K ++RE+M + ++K PG +IE++ ++EFV
Sbjct: 548 KLLRWEKKTKVREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEMGR 607
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+VP S+VL D+DEE+KE AL H+EKLAI F L+S PG IRI+KNLRVC D
Sbjct: 608 EIKRAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLSTPPGTPIRIVKNLRVCED 667
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+AT ISKVYNRE VV DRNRFHHFKNG CSC DFW
Sbjct: 668 CHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 705
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 28/185 (15%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-- 67
AL + ++ ++ +K T +L AC + LE+G +H ++K E D + L
Sbjct: 211 ALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKFGFEEDPHVRNTLVH 270
Query: 68 -------------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVK 102
KD +T +A+I A G +A+ F EMQ+ GV
Sbjct: 271 MYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVC 330
Query: 103 PDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE 162
PD IT V VL AC+ G + E E+ I S+E L+ + + G + +A +
Sbjct: 331 PDEITMVSVLSACADLGAL-ELGKWLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVK 389
Query: 163 LIKNM 167
+ + M
Sbjct: 390 VFREM 394
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 337 bits (863), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 175/390 (44%), Positives = 242/390 (62%), Gaps = 46/390 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ + +E L LFR++Q + D+ TMVS+L AC HLGALE+G W YI K I+ D
Sbjct: 347 YLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKND 406
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL KD T TA+IV LA G G +AL F M
Sbjct: 407 TFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLE 466
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V PD IT++GV+ AC+H GLV + F+ M+ ++GI+P++ HYGC+V +LGRAG +
Sbjct: 467 ASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLK 526
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E+I NMP+ + V G LLGACR+H N++ AE AA ++LEL P+NG YV+L N Y+
Sbjct: 527 EALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYA 586
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ +KWK + +R++M ER IKK PGC L+E++G+V+EFV
Sbjct: 587 ACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENMKQ 646
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+ P+ SEV D+ EE+KETAL +H+EKLAI + L+S GV IRI+KNLR+C D
Sbjct: 647 DLSNAGYSPDTSEVFLDVGEEDKETALYMHSEKLAIAYALISSGKGVTIRIVKNLRMCVD 706
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNG 344
CH ++SKVYNRE +V D+ RFHHF++G
Sbjct: 707 CHHMAMVVSKVYNRELIVRDKTRFHHFRHG 736
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 22/193 (11%)
Query: 8 EEALLLFREVQHKG--LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGM 65
EE+ LF E++ K ++ + VT+V +L AC+ L L G ++ +K+ G+
Sbjct: 219 EESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKE--------GI 270
Query: 66 ALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERI 125
+++ ALI + A CG+ + A F EM+ R D I++ ++ ++ +D
Sbjct: 271 VEPNLILENALIDMFASCGEMDAARGVFDEMKTR----DVISWTSIVTGFANTCRIDLAR 326
Query: 126 SHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMA---LDHFVLGGLLGA 182
+F+ M E+ + + G L R R + L ++M M+ D F + +L A
Sbjct: 327 KYFDQMPERDYVSWTAMIDGYL-----RMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTA 381
Query: 183 CRIHDNLEAAERA 195
C LE E A
Sbjct: 382 CAHLGALELGEWA 394
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 175/398 (43%), Positives = 234/398 (58%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + C+EAL LF E+Q + ++VTMVS+L +C LGA E G W+H YI KK +++
Sbjct: 298 YAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLT 357
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG M+ K+V T TALI LA G+G ALE+F M
Sbjct: 358 VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLE 417
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
VKP+ +TF+GVL ACSHA LVD+ FN M + I P IEHYGC+V ILGRAG +
Sbjct: 418 NDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE 477
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I NMP + V LL +CR H N+E AE++ + + L P + G Y++LSN Y+
Sbjct: 478 EAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYA 537
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ + R+R L+ E+ IKK PGC LIE+DGVVHEF
Sbjct: 538 LVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK 597
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G+VPN + + +EE KET+++ H+EKLAI +GL+ P IRI KNLR+C D
Sbjct: 598 QIKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRD 657
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT IS+V+ R +V DRNRFHHFK+G CSC D+W
Sbjct: 658 CHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 695
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 90/190 (47%), Gaps = 25/190 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +E + LFR++ + D VTM+S+L+AC L LE+G + YI+ K + +
Sbjct: 197 YTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRN 256
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L +L +DV+ +A+I A + +AL F+EMQ
Sbjct: 257 NTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQK 316
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V P+ +T V VL +C+ G + + HF + +K ++ ++ L+ + G I
Sbjct: 317 GNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKK--MKLTVTLGTQLIDFYAKCGYI 374
Query: 158 AKAEELIKNM 167
++ E+ K M
Sbjct: 375 DRSVEVFKEM 384
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 19/159 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+ ALLLF+++ K + DK T S+L AC+ + AL G +H I+K +
Sbjct: 103 DNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFK--------- 153
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISH 127
+ LI + A CGQ A F M R + + + +L + GL DE +
Sbjct: 154 SNEFVENTLIQMYANCGQIGVARHVFDGMPERSI----VAWNSMLSGYTKNGLWDEVVKL 209
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAE--ELI 164
F + E +R + ++ +L GR+A E ELI
Sbjct: 210 FRKILE---LRIEFDDV-TMISVLMACGRLANLEIGELI 244
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 173/398 (43%), Positives = 248/398 (62%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EA+ +FRE+Q + + VT+VS+L A + LGALE+G W+H Y ++ NI VD
Sbjct: 234 YAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVD 293
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG AL ++V+T + +I LAM G+ L++F +M+
Sbjct: 294 DVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMER 353
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV P +T++G+L ACSHAGLV+E F+ M G+ P IEHYGC+V +LGRAG +
Sbjct: 354 AGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLE 413
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
++EELI NMP+ D + LLGAC++H N+E +R A+ L+EL P + GSYV LSN Y+
Sbjct: 414 ESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYA 473
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
S W+ V ++R +M E +++K PGC IE+DGV+HEF
Sbjct: 474 SLGNWEGVAKVRLMMKEMDVRKDPGCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSR 533
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G+ PN ++VL +MDEE+KE++LN H+EK+AI FGL+S P +RI KNLR+C D
Sbjct: 534 NLILVGYRPNTTQVLTNMDEEDKESSLNYHSEKIAIAFGLISTQPQTPLRITKNLRICED 593
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH++ +ISK+Y R+ +V DR RFHHF NGSCSC D+W
Sbjct: 594 CHSSIKLISKIYKRKIIVRDRKRFHHFVNGSCSCMDYW 631
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 336 bits (862), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 174/397 (43%), Positives = 245/397 (61%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V+ S EEA+ LFRE+Q++G+ GD+VTMV + AC +LGAL++ W+ YI K +I VD+
Sbjct: 440 VQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDL 499
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
LG AL +DV TA I V+AM G A+E F EM +
Sbjct: 500 QLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQ 559
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
VKPD + FV +L ACSH G VD+ F M + +GIRP I HYGC+V +LGRAG + +
Sbjct: 560 KVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEE 619
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A +LI++MP+ + V G LL ACR H N+E A AA++L +L P+ G +V+LSN Y+S
Sbjct: 620 AVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYAS 679
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
+ KW V R+R M E+ ++K PG IEV G++HEF
Sbjct: 680 AGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCR 739
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+AG+VP+ + VL D+DE+EKE L+ H+EKLA+ +GL++ G+ IR++KNLR+C+DC
Sbjct: 740 LSEAGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLITTGQGIPIRVVKNLRMCSDC 799
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H+ ++SK+YNRE V D NR+H FK G CSC+D+W
Sbjct: 800 HSFAKLVSKLYNREITVRDNNRYHFFKEGFCSCRDYW 836
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 99/261 (37%), Gaps = 57/261 (21%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE-- 58
YV + L++ E+ KG DKVTM+S + AC LG L VG H Y+++ +E
Sbjct: 307 YVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGW 366
Query: 59 -------VDVGLG-------------MALKDVMTLTALIVVLAMCGQG------------ 86
+D+ + M K V+T +LI L G
Sbjct: 367 DNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLE 426
Query: 87 -------------------NKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISH 127
+A+E F EMQ +G+ D +T VG+ AC + G +D
Sbjct: 427 RDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALD-LAKW 485
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHD 187
EK I ++ LV + R G + A + K M D +G +
Sbjct: 486 VCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRME-KRDVSAWTAAIGVMAMEG 544
Query: 188 NLEAAERAAQQLLE--LLPDN 206
N E A ++LE + PD+
Sbjct: 545 NTEGAIELFNEMLEQKVKPDD 565
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 22/138 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE-- 58
Y ++A+LL+ ++ G+ DK T LL AC+ + AL G+ +H ++K +E
Sbjct: 105 YASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGD 164
Query: 59 ----------------VDVGL----GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
VD+G GM ++V++ T+LI + +A+ F++M
Sbjct: 165 IFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGE 224
Query: 99 RGVKPDAITFVGVLVACS 116
GV+P+ +T V V+ AC+
Sbjct: 225 AGVEPNPVTMVCVISACA 242
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 82/196 (41%), Gaps = 49/196 (25%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+EA+ LF ++ G+ + VTMV ++ AC L LE+G + YI + LGM L
Sbjct: 213 KEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISE--------LGMEL 264
Query: 68 KDVMTLTALIVVLAMCGQ-----------GNKALEYFY--------------------EM 96
+M + AL+ + CG NK L + EM
Sbjct: 265 STIM-VNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEM 323
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHY----GCLVYILG 152
+G +PD +T + + AC+ G + S S Y +R +E + ++ +
Sbjct: 324 LQKGPRPDKVTMLSTIAACAQLGDLSVGKS-----SHAYVLRNGLEGWDNISNAIIDMYM 378
Query: 153 RAGRIAKAEELIKNMP 168
+ G+ A ++ ++MP
Sbjct: 379 KCGKREAACKVFEHMP 394
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 177/398 (44%), Positives = 240/398 (60%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ EAL LF +Q +G+ ++V+MVS+L AC+HLGAL+ G W H YI + + +
Sbjct: 218 YVQCGQSREALSLFNLMQREGVKVNEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMT 277
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ LG AL K+V T ++ I LAM G G K LE F M+
Sbjct: 278 LTLGTALIDMYAKCGNMNKAMEVFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQ 337
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V+P+ ITFV VL CS GLV+E HF MS+ YGI P +EHYGC+V + GRAG +
Sbjct: 338 DSVQPNEITFVSVLRGCSVVGLVEEGRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLD 397
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A I +MP+ G LL AC+I+ N+E E A+++++EL N G+YV+LSN Y+
Sbjct: 398 EALNFINSMPVRPHVGAWGALLNACKIYRNMEMGELASRKIVELEAKNHGAYVLLSNIYA 457
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
S+ W +V +R+ M + ++K PGC +IEV G VHEF
Sbjct: 458 DSKDWDRVSNVRQTMNVKGVRKQPGCSVIEVGGEVHEFFVGDKSHPRYAEIQVMLGEISR 517
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+G+V N + V FD++EEEKE AL +H+EK+AI FGL+S P V IRI+KNLRVC D
Sbjct: 518 RLKLSGYVANTNPVFFDIEEEEKEDALCMHSEKIAIAFGLISLSPDVPIRIVKNLRVCWD 577
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT +ISK +NRE VV DRNRFHHF++G CSCK +W
Sbjct: 578 CHDATKMISKAFNREIVVRDRNRFHHFRDGECSCKGYW 615
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 60 DVGLG------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLV 113
DVG M+ KD + A+I CGQ +AL F MQ GVK + ++ V VL
Sbjct: 192 DVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVLS 251
Query: 114 ACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
ACSH G +D+ R +H + E+ +R ++ L+ + + G + KA E+ M
Sbjct: 252 ACSHLGALDQGRWAHAYI--ERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGM 304
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/399 (42%), Positives = 238/399 (59%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ EAL +F +Q + + D +V +L AC GALE G W+H Y+ I+++
Sbjct: 184 YVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKIN 243
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ G AL K+V+ T +I LAM G+G++A+ F +M+
Sbjct: 244 LFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMES 303
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD I F+GVL AC+HAGLVD+ F+ M KYGI+P IEHYGC+V +L R G +
Sbjct: 304 SGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLY 363
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A+E+I+ MPM D + G L+ CR H N+E AE A+ + L PD G+YV+LSN Y+
Sbjct: 364 EAKEMIQKMPMEPDALIWGALMAGCRFHKNVEFAEYVAKHWILLEPDKSGAYVLLSNIYA 423
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+S + + IR LM E+ + K PGC +EV+GV+H+F+
Sbjct: 424 ASGRHASAREIRHLMREKGVDKTPGCSTVEVNGVIHQFIVGDLSHPRIKDILSKWYEIDT 483
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ G++P+ EVL D++EEEKE AL+ H+EKLAI F L+S + IRI KNLRVC+
Sbjct: 484 RIRLEEGYIPDMKEVLLDIEEEEKEGALSRHSEKLAIAFALISISDNMPIRIFKNLRVCH 543
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH T +ISKVY RE VV DR RFH FK G+CSCKD+W
Sbjct: 544 DCHHVTKLISKVYGREIVVRDRTRFHLFKEGTCSCKDYW 582
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE- 123
M ++ ++ +A++ G G +AL F MQ V+PD VGVL AC+ G +++
Sbjct: 169 MPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQG 228
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ H L + +GI+ ++ LV + + G + A ++ + M
Sbjct: 229 KWVHGYL--KAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERM 270
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 180/393 (45%), Positives = 242/393 (61%), Gaps = 48/393 (12%)
Query: 8 EEALLLFREVQ-HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMA 66
+EAL LF E+Q K D+VT+VS L AC LGA+++G W+H YI K+ ++++ L +
Sbjct: 351 KEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTS 410
Query: 67 L----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
L KDV +A+I LAM G G A+ F +MQ VKP+
Sbjct: 411 LIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPN 470
Query: 105 AITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
A+TF +L ACSH GLV+E + FN M YG+ P ++HY C+V ILGRAG + +A ELI
Sbjct: 471 AVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELI 530
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWK 224
+ MPMA V G LLGAC IH+N+ AE+A QL+EL P N G+YV+LSN Y+ + KW
Sbjct: 531 EKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWD 590
Query: 225 KVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAG 260
+V +R+LM + +KK PGC IEVDG+VHEF+ G
Sbjct: 591 RVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIG 650
Query: 261 FVPNKSEVLFDMDEEE-KETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
+VPNKS +L ++EE+ KE AL LH+EKLAI FGL+S IRI+KNLRVC DCH+
Sbjct: 651 YVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVA 710
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
++SK+Y+RE ++ DR RFHHF+ G CSC D+W
Sbjct: 711 KLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 54/176 (30%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI--- 57
+V+ EEAL LF+E++ + + + +TMV +L AC E G W+H YI + I
Sbjct: 212 FVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGES 271
Query: 58 ----------------------------------------------EVDVGLG----MAL 67
E D G M
Sbjct: 272 LTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPN 331
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQI-RGVKPDAITFVGVLVACSHAGLVD 122
+D+ ALI CG+ +ALE F+E+Q+ + KPD +T V L AC+ G +D
Sbjct: 332 QDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMD 387
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 26/192 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLT-GDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y S ++LL+F + H+ DK T L+ A + L L G H ++K +
Sbjct: 110 YASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGS 169
Query: 60 DV----------------GLG------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
DV GLG + +DV++ ++I G +ALE F EM+
Sbjct: 170 DVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEME 229
Query: 98 IRGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ VKP+ IT VGVL AC+ + R H + E+ I S+ ++ + + G
Sbjct: 230 TQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYI--ERNRIGESLTLSNAMLDMYTKCGS 287
Query: 157 IAKAEELIKNMP 168
+ A+ L MP
Sbjct: 288 VEDAKRLFDKMP 299
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 177/402 (44%), Positives = 244/402 (60%), Gaps = 50/402 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EEAL++F E+ G+ D+V +VS+L AC HL ++ G +H +++ IE
Sbjct: 239 YEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESY 298
Query: 61 VGL--------------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFY 94
V L GM K V + ALI+ LA+ G ++L+ F
Sbjct: 299 VNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFS 358
Query: 95 EMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRA 154
EM+ GV P+ ITF+GVL AC H GLVDE HF M EK+GI P+++HYGC+V +LGRA
Sbjct: 359 EMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRA 418
Query: 155 GRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILS 214
G + +AE+LI++MPMA D G LLGAC+ H + E ER ++L+EL PD+ G +V+LS
Sbjct: 419 GLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLS 478
Query: 215 NRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA--------------- 259
N ++S W+ V +R +M ++ + K PGC LIE +GVVHEF+
Sbjct: 479 NIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLN 538
Query: 260 ---------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLR 310
G+ P+ +EV D+DEEEKET L H+EKLAI FGL++ P IRI+KNLR
Sbjct: 539 EMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLR 598
Query: 311 VCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+CNDCHTA +ISK Y RE VV DR+RFH+FK G+CSC D+W
Sbjct: 599 ICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 640
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLV 121
M KD+++ +ALI G +AL F EM G++ D + V VL AC+H +V
Sbjct: 224 MDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIV 280
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 170/392 (43%), Positives = 245/392 (62%), Gaps = 47/392 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+EA+ +F ++Q + + VT+VS+L A + LGA+E+G W+H + K IE+D LG AL
Sbjct: 238 KEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSAL 297
Query: 68 -----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
K+ +T +A+I LAM G+ AL++F+ MQ GV P
Sbjct: 298 IDMYSKCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPS 357
Query: 105 AITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+ ++GVL ACSHAGLV+E S + M G+ P IEHYGC+V +LGRAG + +AE+LI
Sbjct: 358 DVVYIGVLSACSHAGLVEEGRSIYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLI 417
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWK 224
NMP+ D +L LLGAC++H N+E ER A+ L+ P + GSYV LSN ++S W+
Sbjct: 418 LNMPVKPDDVILKALLGACKMHGNIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWE 477
Query: 225 KVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAG 260
V ++R M E +I+K PGC IE+DGV+HEF+ G
Sbjct: 478 GVVKVRLKMKELDIRKDPGCSWIELDGVIHEFLVEDDSHPRAEGIHSMLEEMSDRLRSVG 537
Query: 261 FVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATN 320
+ PN ++VL +MDE+EK++AL+ H+EK+AI FGL+S P ++I+KNLRVC DCH++
Sbjct: 538 YRPNTTQVLLNMDEKEKQSALHYHSEKIAIAFGLISTRPQTPLQIVKNLRVCEDCHSSIK 597
Query: 321 IISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
++SK+YNR+ +V DR RFHHF+NGSCSC D+W
Sbjct: 598 LVSKIYNRKIIVRDRKRFHHFENGSCSCMDYW 629
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 64 GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE 123
M K V++ +I A G +A+E F++MQ+ V P+ +T V VL A S G + E
Sbjct: 215 SMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLGAI-E 273
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI-----KNMPMALDHFVLGG 178
+L +EK I L+ + + G I KA ++ K P+ ++GG
Sbjct: 274 LGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWS-AIIGG 332
Query: 179 LLGACRIHDNLEAAERAAQ 197
L R D L+ R Q
Sbjct: 333 LAMHGRARDALDHFWRMQQ 351
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 9 EALLLFREVQHKGLT-GDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EALL F + GL +K T +L AC L +E G LH +++K LG+ +
Sbjct: 105 EALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIEEGKQLHGFVVK--------LGL-V 155
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG 100
D + L+ V MCG A FY+ ++ G
Sbjct: 156 SDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEG 188
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/398 (44%), Positives = 249/398 (62%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ +AL FR +Q + D+ TMVS++ AC LGALE G W Y+ + I++D
Sbjct: 268 YVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMD 327
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL +D T TA+I+ LA+ G+G +A++ FY M
Sbjct: 328 VFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLR 387
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
PD +TFVGVL AC+HAGLVD+ F M+E Y I P++ HYGCL+ +LGRAG++
Sbjct: 388 ALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLK 447
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I MPM + + G LL +CR++ N E E AA++LLEL PDN +Y++LSN Y+
Sbjct: 448 EALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLELDPDNSTAYILLSNMYA 507
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S +WK V+RIR+++ E+ IKK PGC +IE++G++HEFV
Sbjct: 508 KSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMNGIIHEFVAADRSHPMNKEIYSKLENVLT 567
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VP+ +EVL ++ EEEK+ L H+EKLA+TF L++ V+IRI+KNLR+C D
Sbjct: 568 DLRNAGYVPDVTEVLVEVTEEEKQKVLYWHSEKLAVTFALLTSESNVIIRIVKNLRMCLD 627
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A +ISK+Y RE +V DR RFHHF++GSCSCKD+W
Sbjct: 628 CHNAIKLISKLYGREVIVRDRTRFHHFRHGSCSCKDYW 665
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
M +D + TA+I G+ ALE F MQI V+ D T V V+ AC+ G + E
Sbjct: 253 MPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGAL-ET 311
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ + GI+ + L+ + + G I +A ++ K+M
Sbjct: 312 GEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDM 354
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 71/172 (41%), Gaps = 21/172 (12%)
Query: 27 VTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKDVMTLTALIVVLAMCGQG 86
VT VS+L AC L +GM +H +++ + L D AL+ + A CG
Sbjct: 162 VTYVSVLSACGKGKDLLLGMQVHKRVLESGV---------LPDQRVENALVDMYAECGDM 212
Query: 87 NKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGC 146
+ A F MQ+R + ++ V+ +G VD F+ M E+ I +
Sbjct: 213 DAAWVLFEGMQMRSMA----SWTSVISGLVRSGQVDRARDLFDHMPERDTI-----AWTA 263
Query: 147 LVYILGRAGRIAKAEELIKNMPMA---LDHFVLGGLLGACRIHDNLEAAERA 195
++ + GR A E + M + D F + ++ AC LE E A
Sbjct: 264 MIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWA 315
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 172/398 (43%), Positives = 238/398 (59%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV EAL LF E+Q G+ +VT+VS+L AC +GALE GMW+H Y+ + + V
Sbjct: 231 YVRVGRSREALGLFDEMQKAGVAVSEVTLVSVLTACAQMGALERGMWVHSYVCSRGMRVS 290
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL D + T T+ + LAM G G + LE F M+
Sbjct: 291 VTLGTALVDMYSKCGVVTMSMEVFETMRERNIYTWTSALSGLAMNGMGEECLELFKRMES 350
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++P+ +TFV VL CS AGLV+E + F+ M +K+ + P +EHYGC+V + GRAGR+
Sbjct: 351 AGMEPNGVTFVAVLRGCSVAGLVEEGRACFDSMKDKHKVEPWLEHYGCMVDLYGRAGRLD 410
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A + I +MP+ V G LL A RIH+N++ + A +L E+ N ++V+LSN Y+
Sbjct: 411 DAVDFINSMPVEPHEGVWGALLNASRIHNNVDLGKHAMHKLTEIESKNDAAHVLLSNIYA 470
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
S WK V ++R +M + +KK PGC IEVDG VHEF
Sbjct: 471 ESHNWKGVSKVRNMMKSKGVKKMPGCSAIEVDGKVHEFFVGSKSHPRYKDIQTMLAEMSH 530
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ N EVLFD++EEEKE A++LH+EKLA+ FGL++ +IRI+KNLRVC D
Sbjct: 531 RLRLQGYAANTKEVLFDIEEEEKEGAISLHSEKLALAFGLITLPEDTVIRIVKNLRVCKD 590
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH T +ISKV++RE V+ DRNRFHHFK+G+CSC+D+W
Sbjct: 591 CHDYTKLISKVFDREIVMRDRNRFHHFKHGACSCRDYW 628
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 64 GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE 123
GM +D + A++ G+ +AL F EMQ GV +T V VL AC+ G ++
Sbjct: 215 GMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVLTACAQMGALER 274
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ + + + G+R S+ LV + + G + + E+ + M
Sbjct: 275 GMWVHSYVCSR-GMRVSVTLGTALVDMYSKCGVVTMSMEVFETM 317
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 174/398 (43%), Positives = 234/398 (58%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL LF+ +Q G+ ++V+M+S++ ACTHLGAL+ G W H YI K I++
Sbjct: 217 YAQRGQSREALNLFKLMQMDGVKVNEVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMT 276
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL K+V T + I LAM G G K LE F M+
Sbjct: 277 VNLGTALVDMYFKCGNVDRALKVFWEMNEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKH 336
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ P+ ITF+ VL CS G VDE SHF+ M +GI P +EHYGC+V + GRAGR+
Sbjct: 337 EGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLE 396
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A I MP+ G LL ACR++ N+E E A+++L+E+ N G+YV LSN Y+
Sbjct: 397 EALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLIEVEGKNHGAYVSLSNIYA 456
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
+ W +V +R+ M I K PGC ++EV+G VHEF
Sbjct: 457 DTGNWDRVSNVRQSMKAEGISKLPGCSVMEVNGEVHEFFSGDKSHPSYDVIETMWGEISK 516
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+V + + VLFD++EEEKE AL H+EK+AI FGL S G+ IRI+KNLR+C D
Sbjct: 517 RLKLAGYVASTNSVLFDIEEEEKEDALCKHSEKMAIAFGLFSLKEGLPIRIVKNLRICWD 576
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH + +ISK++ RE +V DRNRFHHFK+G CSCKDFW
Sbjct: 577 CHDVSKMISKIFEREIIVRDRNRFHHFKDGECSCKDFW 614
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E S +F VQ L + TMVS C +G +
Sbjct: 155 YAEMSCLSSCHRVFESVQKPDLVC-QTTMVSACAKCGDIG----------------FARN 197
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+ M +D ++ A+I A GQ +AL F MQ+ GVK + ++ + V+ AC+H G
Sbjct: 198 LFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNEVSMISVVTACTHLGA 257
Query: 121 VDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+D+ + +H + EK I+ ++ LV + + G + +A ++ M
Sbjct: 258 LDQGKWAHAYI--EKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEM 303
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 174/400 (43%), Positives = 241/400 (60%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y + +EALLLF+E+ G + VT++S+L AC HLGA+++G W+H YI KK
Sbjct: 276 YTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVT 335
Query: 56 -----------------NIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+IE V M + + + A+I AM G+ N A + F M
Sbjct: 336 NETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRM 395
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ V+PD ITFVG+L ACSH+GL+D F M++ Y + P +EHYGC++ +LG +G
Sbjct: 396 RGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGL 455
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+AEE+I MPM D + LL AC+ H NLE AE AQ+L+++ P+N GSYV+LSN
Sbjct: 456 FKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNI 515
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+++ +W+ V R+R ++ + +KK PGC IEVD VVHEF+
Sbjct: 516 YATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEM 575
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+AGF P+ SEVL +M+EE KE AL H+EKLAI FGL+S PG + I+KNLRVC
Sbjct: 576 DVQLEEAGFAPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVC 635
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+CH AT +ISK+Y RE V DR RFHHF++G CSC D+W
Sbjct: 636 RNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 675
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 27/194 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
YVE+ EEAL LF+E+ + D+ T+VS++ AC G++E+G +H ++
Sbjct: 171 YVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHG 230
Query: 56 -------------------NIEVDVGL--GMALKDVMTLTALIVVLAMCGQGNKALEYFY 94
++E GL G++ KDV++ LI +AL F
Sbjct: 231 FSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQ 290
Query: 95 EMQIRGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGR 153
EM G P+ +T + VL AC+H G +D R H + + G+ L+ + +
Sbjct: 291 EMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAK 350
Query: 154 AGRIAKAEELIKNM 167
G I A ++ +M
Sbjct: 351 CGDIEAAHQVFNSM 364
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD---ER 124
+DV++ A+I G+ +ALE F EM V+PD T V V+ AC+ +G ++ +
Sbjct: 159 RDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQV 218
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
S + + +G S++ L+ + + G + A L + +
Sbjct: 219 HSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGL 261
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 179/402 (44%), Positives = 236/402 (58%), Gaps = 50/402 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTG---DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI 57
YV +EAL LFRE+Q G+ ++ TM +L AC LGALE G W H YI K +
Sbjct: 171 YVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGM 230
Query: 58 EVDVGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEYFY 94
VDV LG AL KDVM +A+I LAM G + + F
Sbjct: 231 PVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFS 290
Query: 95 EMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRA 154
+M +GV+P+A+TF+ V AC H GLV E + M+E Y I P+I+HYGC+V + GRA
Sbjct: 291 KMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRA 350
Query: 155 GRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILS 214
GRI +A ++K+MPM D V G LL R+H ++E E A ++L+EL P N G+YV+LS
Sbjct: 351 GRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLS 410
Query: 215 NRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA--------------- 259
N Y+ +W+ V+ +R+LM IKK PGC LIEV GV+HEF
Sbjct: 411 NVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLE 470
Query: 260 ---------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLR 310
G+V N EVL D+DEE KE AL+LH+EKLA+ +G + PG IRI+KNLR
Sbjct: 471 EILERLKVEGYVGNTKEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLR 530
Query: 311 VCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+C DCH A +ISKV++RE +V D NRFHHF G CSC+D+W
Sbjct: 531 ICRDCHVAIKMISKVFDREIIVRDCNRFHHFTQGLCSCRDYW 572
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 24/177 (13%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKDVMT 72
+F ++ G+ D T LL + L +G +H I++ G+A+ D
Sbjct: 51 IFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSVHAQILR--------FGLAI-DPFV 101
Query: 73 LTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMS 132
T+LI + + CG A + F E+ +PD ++ ++ A AGLVD + F +M
Sbjct: 102 QTSLISMYSSCGNLGFARQVFDEIP----QPDLPSWNSIINANFQAGLVDMARNLFAVMP 157
Query: 133 EKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPM------ALDHFVLGGLLGAC 183
E+ ++ + C++ R G+ +A L + M M + F + G+L AC
Sbjct: 158 ER-----NVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAAC 209
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG---VKPDAITFVGVLVACSHAGLV 121
M ++V++ + +I CGQ +AL F EMQ+ G V+P+ T GVL AC G +
Sbjct: 156 MPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGAL 215
Query: 122 DE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLL 180
+ + +H + +K G+ + L+ + + G + KA + N+ D ++
Sbjct: 216 EHGKWAHAYI--DKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMI 273
Query: 181 GACRIH 186
+H
Sbjct: 274 SGLAMH 279
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 333 bits (855), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 179/402 (44%), Positives = 236/402 (58%), Gaps = 50/402 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTG---DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI 57
YV +EAL LFRE+Q G+ ++ TM +L AC LGALE G W H YI K +
Sbjct: 140 YVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGM 199
Query: 58 EVDVGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEYFY 94
VDV LG AL KDVM +A+I LAM G + + F
Sbjct: 200 PVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFS 259
Query: 95 EMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRA 154
+M +GV+P+A+TF+ V AC H GLV E + M+E Y I P+I+HYGC+V + GRA
Sbjct: 260 KMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRA 319
Query: 155 GRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILS 214
GRI +A ++K+MPM D V G LL R+H ++E E A ++L+EL P N G+YV+LS
Sbjct: 320 GRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLS 379
Query: 215 NRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA--------------- 259
N Y+ +W+ V+ +R+LM IKK PGC LIEV GV+HEF
Sbjct: 380 NVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLE 439
Query: 260 ---------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLR 310
G+V N EVL D+DEE KE AL+LH+EKLA+ +G + PG IRI+KNLR
Sbjct: 440 EILERLKVEGYVGNTKEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLR 499
Query: 311 VCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+C DCH A +ISKV++RE +V D NRFHHF G CSC+D+W
Sbjct: 500 ICRDCHVAIKMISKVFDREIIVRDCNRFHHFTQGLCSCRDYW 541
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 17/164 (10%)
Query: 38 HLGALEVGMWLHPYIMKKNIEVDVGLG-----------MALKDVMTLTALIVVLAMCGQG 86
H L G+ + P++ I + G M ++V++ + +I CGQ
Sbjct: 87 HAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQY 146
Query: 87 NKALEYFYEMQIRG---VKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIE 142
+AL F EMQ+ G V+P+ T GVL AC G ++ + +H + +K G+ +
Sbjct: 147 KEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYI--DKCGMPVDVV 204
Query: 143 HYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIH 186
L+ + + G + KA + N+ D ++ +H
Sbjct: 205 LGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMH 248
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 333 bits (853), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 174/398 (43%), Positives = 238/398 (59%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y++ +EAL +F +Q + + K + S+L AC +LGAL+ G W+H Y+ + D
Sbjct: 268 YIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFD 327
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG AL K+V T A+I L M G+ A+E F++MQ
Sbjct: 328 AVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQK 387
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ +P+ IT +GVL AC+H+G+VDE + FN M E YGI P +EHYGC+V +LGRAG +
Sbjct: 388 QKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLG 447
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AEE++ +MPM V G LLGACR H ++E ER + LLEL P N G Y +LSN Y+
Sbjct: 448 EAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYA 507
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ +W V +R+LM ER +K G +I+ DGVVHEF
Sbjct: 508 RAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIK 567
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
GF PN S+VLFD++EEEKE L H+EKLAI FGL++ PG I ++KNLR+C D
Sbjct: 568 RLKMEGFSPNTSQVLFDIEEEEKEAELQYHSEKLAIAFGLINTKPGTTIHVVKNLRMCED 627
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A +IS+VY+RE +V DR R+HHFK G+CSCKDFW
Sbjct: 628 CHSAFKLISQVYDREIIVRDRARYHHFKTGTCSCKDFW 665
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 76/184 (41%), Gaps = 34/184 (18%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV-----GLGM-------------- 65
+K T +L ACT A E G+ +H +++K+ + DV G+ M
Sbjct: 129 NKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRML 188
Query: 66 ---ALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
DV+ A+I CG+ A E F+ M+ + V + G+ + G+++
Sbjct: 189 GEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGM----AKCGMIE 244
Query: 123 ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP---MALDHFVLGGL 179
E FN M EK I S G YI G G +A E+ M + FVL +
Sbjct: 245 EARELFNEMKEKNEISWSAMIDG---YIKG--GYYKEALEVFNVMQREEIRPRKFVLSSV 299
Query: 180 LGAC 183
L AC
Sbjct: 300 LAAC 303
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 175/389 (44%), Positives = 242/389 (62%), Gaps = 50/389 (12%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-- 67
AL LFRE+Q + D+ TMVS+L+AC LGALE+G W+ I K + + D +G AL
Sbjct: 266 ALALFREMQMSNVKPDEFTMVSILIACALLGALELGEWVKTCIDKNSNKNDSFVGNALVD 325
Query: 68 --------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
KD T T +IV LA+ G G +AL F M V PD IT
Sbjct: 326 MYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAINGHGEEALAMFSNMIEASVTPDEIT 385
Query: 108 FVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
++GVL AC +VD+ S F M+ ++GI+P++ HYGC+V +LG G + +A E+I NM
Sbjct: 386 YIGVLCAC----MVDKGKSFFTNMTMQHGIKPTVTHYGCMVDLLGCVGCLEEALEVIVNM 441
Query: 168 PMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVK 227
P+ + V G LGACR+H N++ A+ AA+Q+LEL P+NG YV+L N Y++S+KW+ +
Sbjct: 442 PVKPNSIVWGSPLGACRVHKNVQLADMAAKQILELEPENGAVYVLLCNIYAASKKWENLC 501
Query: 228 RIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGFVP 263
++R+LM ER IKK PGC L+E++G V+EFV KAG+ P
Sbjct: 502 QVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQGLIKAGYSP 561
Query: 264 NKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIIS 323
+ SEV D+ EE+KETAL H+EKLAI + L+S PGV IRI+KNLR+C DCH ++S
Sbjct: 562 DTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHHMAKLVS 621
Query: 324 KVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ YNRE +V D+ RFHHF++GSCSC +FW
Sbjct: 622 QAYNRELIVKDKTRFHHFRHGSCSCNNFW 650
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 179/401 (44%), Positives = 233/401 (58%), Gaps = 50/401 (12%)
Query: 1 YVEDSACEEALLLFREVQH---KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI 57
YV + AL LFR +Q L ++ TM S+L AC LGAL+ G W+H YI K +
Sbjct: 167 YVSCGEYKAALSLFRSLQTLEGSQLRPNEFTMSSVLSACARLGALQHGKWVHAYIDKTGM 226
Query: 58 EVDVGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEYFY 94
++DV LG +L KDVM +A+I +M G + LE F
Sbjct: 227 KIDVVLGTSLIDMYAKCGSIERAKCIFDNLGPEKDVMAWSAMITAFSMHGLSEECLELFA 286
Query: 95 EMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRA 154
M GV+P+A+TFV VL AC H GLV E +F M +YG+ P I+HYGC+V + RA
Sbjct: 287 RMVNDGVRPNAVTFVAVLCACVHGGLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRA 346
Query: 155 GRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILS 214
GRI A ++K+MPM D + G LL RIH ++E E A +LLEL P N +YV+LS
Sbjct: 347 GRIEDAWNVVKSMPMEPDVMIWGALLNGARIHGDVETCEIAITKLLELDPANSSAYVLLS 406
Query: 215 NRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV----------------- 257
N Y+ +W++V+ +R+LM R IKK PGC L+EVDGV+ EF
Sbjct: 407 NVYAKLGRWREVRHLRDLMEVRGIKKLPGCSLVEVDGVIREFFAGDNSHPELLNLYVMLD 466
Query: 258 -------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLR 310
K G+ N EVL D+DEE KE AL+LH+EKLAI + + PG IRI+KNLR
Sbjct: 467 EIMKRLEKHGYERNTGEVLLDLDEEGKEFALSLHSEKLAIAYCFLRTSPGTTIRIVKNLR 526
Query: 311 VCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDF 351
+C+DCH A IISK +NRE +V D NRFHHFKNG CSCKD+
Sbjct: 527 ICSDCHVAIKIISKEFNREIIVRDCNRFHHFKNGLCSCKDY 567
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 171/386 (44%), Positives = 234/386 (60%), Gaps = 46/386 (11%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----- 67
+FRE+Q G +VTMV +LLAC HLGAL G W+ YI + ++V +G AL
Sbjct: 230 VFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYA 289
Query: 68 -----------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVG 110
K+V T LI AM G+G AL+ F M + KPD +TF+G
Sbjct: 290 KCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLG 349
Query: 111 VLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMA 170
VL AC H GLV+E ++F M E++G+RP IEHYGC+V +LGRAG + +A++LI+ M M
Sbjct: 350 VLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQ 409
Query: 171 LDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIR 230
D + LLGACRIH N++ E A ++LLEL P+NG +YV+L+N Y+ ++W KV +R
Sbjct: 410 PDPIIWRELLGACRIHGNIQLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEVR 469
Query: 231 ELMAERNIKKPPGCILIEVDGVVHEFVK------------------------AGFVPNKS 266
E+M R ++K PGC IE+D VV+EFV AG+V +
Sbjct: 470 EMMDCRRVRKVPGCSSIEIDNVVYEFVVSNYIKPGFEEVYKLLADMNKKLKLAGYVADTG 529
Query: 267 EVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVY 326
+D++EEEKE +L H+EKLA+ FGL+ G+ +RI+KNLR+C DCH I+SKVY
Sbjct: 530 MASYDIEEEEKEHSLMYHSEKLALAFGLLKSPSGLTLRIVKNLRICQDCHGFFKIVSKVY 589
Query: 327 NRETVVMDRNRFHHFKNGSCSCKDFW 352
R+ V DRNRFHHF G+CSCKD+W
Sbjct: 590 RRDISVRDRNRFHHFVGGACSCKDYW 615
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 85/195 (43%), Gaps = 35/195 (17%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + ++ ++ ++ G+ D T ++L + L E+G +H I++ E +
Sbjct: 117 YTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQMGFESN 176
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL +++++ ALI K ++ F EMQI
Sbjct: 177 VYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQI 236
Query: 99 RGVKPDAITFVGVLVACSHAG------LVDERISHFNLMSEKYGIRPSIEHYGCLVYILG 152
G KP +T VGVL+AC+H G +D+ I H L R ++ L+ +
Sbjct: 237 AGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRL-------RLNVFVGTALIDMYA 289
Query: 153 RAGRIAKAEELIKNM 167
+ G + +AE++ K M
Sbjct: 290 KCGVVDEAEKIFKAM 304
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/400 (43%), Positives = 239/400 (59%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y + +EALLLF+E+ G + + VTM+S+L AC HLGA+++G W+H YI K+
Sbjct: 271 YTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVT 330
Query: 56 -----------------NIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+IE V M K + A+I AM G+ N A + F M
Sbjct: 331 NASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRM 390
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ +KPD ITFVG+L ACSHAG++D F M+ Y I P +EHYGC++ +LG +G
Sbjct: 391 RKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGL 450
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+AEE+I M M D + LL AC++H N+E E+ AQ L ++ P+N GSYV+LSN
Sbjct: 451 FKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNI 510
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+++ +W +V RIR L+ ++ +KK PGC IE+D VVHEF+
Sbjct: 511 YATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEM 570
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+AGFVP+ SEVL +M+EE KE AL H+EKLAI FGL+S P + I+KNLRVC
Sbjct: 571 EVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHSEKLAIAFGLISTKPETKLTIVKNLRVC 630
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+CH AT +ISK+Y RE + DR RFHHF++G CSC D+W
Sbjct: 631 RNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 670
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
YVE +EAL LF+E+ + D+ TMV+++ A G++E+G +H +I
Sbjct: 170 YVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSN 229
Query: 56 ---------------NIEVDVG--LGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+E G LG++ KDV++ LI +AL F EM
Sbjct: 230 LKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLR 289
Query: 99 RGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G P+ +T + +L AC+H G +D R H + G+ + L+ + + G I
Sbjct: 290 SGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDI 349
Query: 158 AKAEELIKNM 167
A ++ +M
Sbjct: 350 EAAHQVFNSM 359
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ E+A +F H+ D V+ +L+ G +E +N+ +
Sbjct: 108 YVQNERLEDAHKVFDRSSHR----DVVSYTALVTGYASRGYIESA---------RNMFDE 154
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+ +KDV++ A+I G +ALE F EM V+PD T V V+ A + +G
Sbjct: 155 I----PVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGS 210
Query: 121 VD 122
++
Sbjct: 211 IE 212
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/406 (42%), Positives = 241/406 (59%), Gaps = 54/406 (13%)
Query: 1 YVEDSA--CE------EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI 52
YV +S CE E L LF E+Q + ++VT+V+L+ AC LGAL G W H Y+
Sbjct: 185 YVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYV 244
Query: 53 MKKNIEVDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKAL 90
+K N++++ +G AL +D + A+I A+ G G++AL
Sbjct: 245 LKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQAL 304
Query: 91 EYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYI 150
+ F +M + G+ PD +T V + +CSH GLV+E F M E YG+ P +EHYGCLV +
Sbjct: 305 DLFKKMTLEGLAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDL 364
Query: 151 LGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSY 210
LGRAGR+ +AEE + NMPM + + LLGA R+H NLE E + L++L P+ G+Y
Sbjct: 365 LGRAGRLREAEERVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNY 424
Query: 211 VILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------- 257
V+LSN Y+S +W VKR+R+LM + I K PG L+EV G +HEF+
Sbjct: 425 VLLSNMYASINRWDDVKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIY 484
Query: 258 -----------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRII 306
+ G P EVLFD++EEEKE AL+ H+E+LAI F L++ IRII
Sbjct: 485 LKLEEMSRRLHEYGHKPRTLEVLFDIEEEEKEDALSYHSERLAIAFALIASHHCAPIRII 544
Query: 307 KNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
KNLRVC DCHT++ +ISK+Y RE +V DRNRFHHFK G+CSC D+W
Sbjct: 545 KNLRVCGDCHTSSKLISKIYEREIIVRDRNRFHHFKEGACSCSDYW 590
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 173/400 (43%), Positives = 241/400 (60%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y + +EALLLF+E+ G + + VT+VS+L AC HLGA+++G W+H YI KK
Sbjct: 274 YTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVT 333
Query: 56 -----------------NIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+IE V M K + + A+I AM G+ N + F M
Sbjct: 334 NAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRM 393
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ G++PD ITFVG+L ACSH+G +D F M++ Y I P +EHYGC++ +LG +G
Sbjct: 394 RKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGL 453
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+A+E+IK MPM D + LL ACR H NLE AE A+ L+++ P+N GSYV+LSN
Sbjct: 454 FKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNI 513
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+++ +W +V ++R L+ + +KK PGC IE+D VHEF+
Sbjct: 514 YATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRNREIYGMLEEM 573
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+AGFVP+ SEVL +M+EE KE AL H+EKLAI FGL+S PG + I+KNLRVC
Sbjct: 574 EALLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVC 633
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+CH AT ++SK+Y RE + DR RFHHF++G CSC DFW
Sbjct: 634 RNCHEATKLVSKIYKREIIARDRTRFHHFRDGVCSCNDFW 673
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y E + +EAL LF+E+ + D+ TMV++L AC ++E+G +H +I
Sbjct: 173 YAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSN 232
Query: 56 ---------------NIEVDVGL--GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+E GL G++ KDV++ LI +AL F EM
Sbjct: 233 LKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLR 292
Query: 99 RGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G P+ +T V +L AC+H G +D R H + + + + L+ + + G I
Sbjct: 293 SGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDI 352
Query: 158 AKAEELIKNM 167
A ++ +M
Sbjct: 353 EAAHQVFNSM 362
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
+ +KDV++ A+I A G +ALE F EM V+PD T V VL AC+ + V E
Sbjct: 158 IPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSV-EL 216
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA 160
+ + +G +++ L+ + + G++ A
Sbjct: 217 GRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETA 252
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 81/202 (40%), Gaps = 31/202 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y S AL L+ + GL + T LL +C A E G +H +++K E D
Sbjct: 41 YALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPD 100
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + +L +DV++ TALI A G A E F E+ +
Sbjct: 101 LYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPV 160
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ D +++ ++ + G E + F M K +RP G +V +L + +
Sbjct: 161 K----DVVSWNAMISGYAETGSYKEALELFKEMM-KTNVRPD---EGTMVTVLSACAQ-S 211
Query: 159 KAEELIKNMPMALDHFVLGGLL 180
++ EL + + +D G L
Sbjct: 212 RSVELGRQVHSWIDDHGFGSNL 233
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 176/405 (43%), Positives = 246/405 (60%), Gaps = 53/405 (13%)
Query: 1 YVEDSACEEALLLFREVQHKG-----LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK 55
YV +EAL LFRE+Q ++ +K TM ++L AC LGALE G W+H YI K
Sbjct: 168 YVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMSTVLSACGRLGALEQGKWVHSYIDKY 227
Query: 56 NIEVDVGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEY 92
+E+D+ LG AL KDV +A+I LAM G ++ +
Sbjct: 228 GVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSKKDVKAYSAMICCLAMYGLTDECFQV 287
Query: 93 FYEMQI-RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYIL 151
F EM + P+++TFVG+L AC H GL+++ S+F +M+E++GI PSI+HYGC+V +
Sbjct: 288 FSEMTTSNNINPNSVTFVGILGACVHRGLINKGKSYFKMMTEEFGITPSIQHYGCMVDLY 347
Query: 152 GRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYV 211
GR+G I +AE I +MPM D + G LL R+ +++ E A ++L+EL P N G+YV
Sbjct: 348 GRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYV 407
Query: 212 ILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------- 257
+LSN Y+ + +W +VKRIR M + IKK PGC +EV+GVVHEFV
Sbjct: 408 LLSNVYAKTGRWIEVKRIRHEMEVKGIKKVPGCSYVEVEGVVHEFVVGDESQQESERIYA 467
Query: 258 ----------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIK 307
+AG+V + EVL D++E++KE AL+ H+EKLAI F L+ PG +RIIK
Sbjct: 468 MLEEIMQRLREAGYVSDTKEVLLDLEEKDKEMALSYHSEKLAIAFCLMKTRPGTPVRIIK 527
Query: 308 NLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
NLR+C DCH +ISK+++RE VV D NRFHHF +GSCSC+DFW
Sbjct: 528 NLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFSDGSCSCRDFW 572
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG-----VKPDAITFVGVLVACSHAG 119
M ++V++ + LI MCG+ +AL+ F EMQ+ V P+ T VL AC G
Sbjct: 153 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMSTVLSACGRLG 212
Query: 120 LVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+++ + H + +KYG+ I L+ + + G + +A+ +
Sbjct: 213 ALEQGKWVHSYI--DKYGVEIDIVLGTALIDMYAKCGSLERAKRVF 256
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 175/400 (43%), Positives = 240/400 (60%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQ-HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ EAL++F E+Q K + +++T+VS L AC +GALE+G W+H YI K I +
Sbjct: 339 YEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRM 398
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ + AL +DV +A+I LAM G GN+A++ FY+MQ
Sbjct: 399 NFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQ 458
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
VKP+ +TF V ACSH GLVDE S F+ M YGI P +HY C+V +LGR+G +
Sbjct: 459 EANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYL 518
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA + I+ MP+ V G LLGAC+IH NL AE A +LLEL P N G++V+LSN Y
Sbjct: 519 EKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIY 578
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
+ KW+ V +R+ M +KK PGC IE+DG++HEF+
Sbjct: 579 AKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVM 638
Query: 260 ------GFVPNKSEVLFDMDEEE-KETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
G+ P S+VL ++EEE KE +LNLH+EKLAI +GL+S +IR+IKNLRVC
Sbjct: 639 EKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVC 698
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+ +IS++Y+RE +V DR RFHHF+NG CSC DFW
Sbjct: 699 GDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 103/241 (42%), Gaps = 58/241 (24%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V+ + ++AL LF++++ + + VTMV +L AC + LE G + YI + + V+
Sbjct: 207 FVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVN 266
Query: 61 VGLGMAL----------------------------------------------------- 67
+ L A+
Sbjct: 267 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQ 326
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQI-RGVKPDAITFVGVLVACSHAGLVD-ERI 125
KD++ ALI G+ N+AL F+E+Q+ + +K + IT V L AC+ G ++ R
Sbjct: 327 KDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRW 386
Query: 126 SHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRI 185
H + +K+GIR + L+++ + G + K+ E+ ++ D FV ++G +
Sbjct: 387 IHSYI--KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAM 443
Query: 186 H 186
H
Sbjct: 444 H 444
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----------------- 67
+K T L+ A + +L +G LH +K + DV + +L
Sbjct: 130 NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 189
Query: 68 -----KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACS 116
KDV++ ++I G +KALE F +M+ VK +T VGVL AC+
Sbjct: 190 TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACA 243
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 171/400 (42%), Positives = 240/400 (60%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y + +EALLLF+E+ G + + VTM+S+L AC HLGA+E+G W+H YI K+
Sbjct: 296 YTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVA 355
Query: 56 -----------------NIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+IE V + + + + A+I AM G+ N A + F M
Sbjct: 356 NASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRM 415
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ ++PD ITFVG+L ACSH+G++D F M E Y I P +EHYGC++ +LG +G
Sbjct: 416 RKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGL 475
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+AEE+I M M D + LL AC++H N+E E AQ L+++ P N GSYV+LSN
Sbjct: 476 FKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNI 535
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+++ +W +V +IR L+ ++ +KK PGC IE+D VVHEF+
Sbjct: 536 YATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEM 595
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+AGFVP+ SEVL +M+EE KE AL H+EKLAI FGL+S PG + I+KNLRVC
Sbjct: 596 EVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVC 655
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+CH AT +ISK+Y RE + DR RFHHF++G CSC D+W
Sbjct: 656 RNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 23/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHP---------- 50
Y E +EAL LF+E+ + D+ TMVS++ AC ++E+G +H
Sbjct: 195 YAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSN 254
Query: 51 ----------YIMKKNIEVDVGL--GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
YI +E GL G++ KDV++ LI +AL F EM
Sbjct: 255 LKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 314
Query: 99 RGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G P+ +T + +L AC+H G ++ R H + G+ + H L+ + + G I
Sbjct: 315 SGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDI 374
Query: 158 AKAEELIKNM 167
A+++ ++
Sbjct: 375 EAAQQVFDSI 384
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 17/122 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ E+A +F + H+ D V+ +L+ G YI D
Sbjct: 133 YVQNGRLEDARKVFDQSSHR----DVVSYTALITGYASKG----------YIASAQKMFD 178
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+ +KDV++ A+I A G +ALE F EM V+PD T V V+ AC+ +
Sbjct: 179 ---EIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSAS 235
Query: 121 VD 122
++
Sbjct: 236 IE 237
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 330 bits (847), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 170/398 (42%), Positives = 238/398 (59%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y +++ +EA +F + G+ ++ TMVSLL+ C G+LE+G W+H YI K+ I+ D
Sbjct: 404 YAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGD 463
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L + +D+ A+I AM G G ALE F EM+
Sbjct: 464 MILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEA 523
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV P+ ITF+G L ACSH+GL+ E F+ M ++G P +EHYGC+V +LGRAG +
Sbjct: 524 LGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLD 583
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A ELIK+MPM + V G L AC++H N++ E AA+Q L L P G V++SN Y+
Sbjct: 584 EAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYA 643
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S+ +W V IR M + I K PG IEV+G++HEF+
Sbjct: 644 SANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVYEMIDEMRE 703
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+ P+ S VL ++D+E+K +ALN H+EKLA+ +GL+S PGV IRI+KNLRVC+D
Sbjct: 704 KLEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGLISTAPGVPIRIVKNLRVCDD 763
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT ++SK+Y RE +V DRNRFHHFK GSCSC D+W
Sbjct: 764 CHNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCDYW 801
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ + E + LF ++ +G+ +++TM+SL+ C GALE+G LH + ++ +
Sbjct: 303 YIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLS 362
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L A KD+M +A+I A ++A + F M
Sbjct: 363 LVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTG 422
Query: 99 RGVKPDAITFVGVLVACSHAG 119
G++P+ T V +L+ C+ AG
Sbjct: 423 CGIRPNERTMVSLLMICAKAG 443
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 60/139 (43%), Gaps = 24/139 (17%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIM------KKNIEVDV 61
+EAL L R++ + ++ M+S+ L L++G +H Y+M K + +
Sbjct: 207 DEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCT 266
Query: 62 GL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
L G++ +++ TA+I C N+ + F +M G+ P
Sbjct: 267 ALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFP 326
Query: 104 DAITFVGVLVACSHAGLVD 122
+ IT + ++ C AG ++
Sbjct: 327 NEITMLSLVKECGTAGALE 345
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 172/399 (43%), Positives = 241/399 (60%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKG-LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y + +A+ LFR++QH+G L + VT+VS+L AC HLGAL++G W+H +I + IEV
Sbjct: 234 YARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEV 293
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ LG AL +DV++ + +I+ LAM G N+A +F EM
Sbjct: 294 GLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMI 353
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G++P+ I+F+G+L AC+HAGLVD+ + +F++M + YGI P IEHYGC+V +L RAGR+
Sbjct: 354 EDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRL 413
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+AE LI +MPM + V G LLG CRI+ + E ER ++LEL ++ GS V L+N Y
Sbjct: 414 DQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVY 473
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------- 258
+S + R M + K PGC IE++ V+EF
Sbjct: 474 ASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELK 533
Query: 259 -----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
AG+ P V+ ++DEEEKE AL+ H+EKLA+ FGL++ G IRI+KNLRVCN
Sbjct: 534 WKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCN 593
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A IISK+ RE VV DR+RFHHFK+G CSC D+W
Sbjct: 594 DCHDAIKIISKIVEREIVVRDRSRFHHFKDGKCSCNDYW 632
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 330 bits (846), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 176/400 (44%), Positives = 237/400 (59%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQ-HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ EALL+F E+Q K + +++T+VS L AC +GALE+G W+H YI K I++
Sbjct: 341 YEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKM 400
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ + AL +DV +A+I LAM G G++A++ FY+MQ
Sbjct: 401 NFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQ 460
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
VKP+ +TF V ACSH GLVDE S F M YGI P +HY C+V +LGR+G +
Sbjct: 461 EANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYL 520
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA + I+ MP+ V G LLGAC+IH NL AE A +LLEL P N G++V+LSN Y
Sbjct: 521 EKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIY 580
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
+ S KW V +R+ M +KK PGC IE+DG++HEF+
Sbjct: 581 AKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVM 640
Query: 260 ------GFVPNKSEVLFDMDEEE-KETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
G+ P S VL ++EEE KE +LNLH+EKLAI +GL+S IR+IKNLR+C
Sbjct: 641 EKLKSNGYEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKAIRVIKNLRMC 700
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH +IS++YNRE +V DR RFHHF+NG CSC DFW
Sbjct: 701 GDCHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 58/241 (24%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V+ + ++AL LF++++ + + VTMV +L AC + LE G + YI + + V+
Sbjct: 209 FVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVN 268
Query: 61 VGLGMAL----------------------------------------------------- 67
+ L A+
Sbjct: 269 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPK 328
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQI-RGVKPDAITFVGVLVACSHAGLVD-ERI 125
KD++ ALI G+ N+AL F+E+Q+ + +K + IT V L AC+ G ++ R
Sbjct: 329 KDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRW 388
Query: 126 SHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRI 185
H + +K GI+ + L+++ + G + KA E+ ++ D FV ++G +
Sbjct: 389 IHSYI--KKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVE-KRDVFVWSAMIGGLAM 445
Query: 186 H 186
H
Sbjct: 446 H 446
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 101/241 (41%), Gaps = 34/241 (14%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----------------- 67
+K T L+ A + +L +G LH +K + DV + +L
Sbjct: 132 NKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 191
Query: 68 -----KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
KDV++ ++I G +KALE F +M+ VK +T VGVL AC+ ++
Sbjct: 192 TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLE 251
Query: 123 --ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLL 180
R+ + E+ + ++ ++ + + G I A+ L M D+ +L
Sbjct: 252 FGRRVCSY---IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK-DNVTWTTML 307
Query: 181 GACRIHDNLEAAERAAQQLLELLP--DNGGSYVILSNRYSSSRKWKKVKRIRELMAERNI 238
I ++ E AA+++L +P D ++S + + + + EL ++NI
Sbjct: 308 DGYAISEDYE----AAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNI 363
Query: 239 K 239
K
Sbjct: 364 K 364
>gi|297737119|emb|CBI26320.3| unnamed protein product [Vitis vinifera]
Length = 522
Score = 330 bits (845), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 168/391 (42%), Positives = 235/391 (60%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+ L LF E+Q + ++VT+V+L+ AC LGAL G W H Y++K N++++ +G AL
Sbjct: 132 KSVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTAL 191
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+D + A+I A+ G G++AL+ F +M + G+ PD
Sbjct: 192 IDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDD 251
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+T V + +CSH GLV+E F M E YG+ P +EHYGCLV +LGRAGR+ +AEE +
Sbjct: 252 VTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVL 311
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
NMPM + + LLGA R+H NLE E + L++L P+ G+YV+LSN Y+S +W
Sbjct: 312 NMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDD 371
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
VKR+R+LM + I K PG L+EV G +HEF+ + G
Sbjct: 372 VKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMSRRLHEYGH 431
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P EVLFD++EEEKE AL+ H+E+LAI F L++ IRIIKNLRVC DCHT++ +
Sbjct: 432 KPRTLEVLFDIEEEEKEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCHTSSKL 491
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISK+Y RE +V DRNRFHHFK G+CSC D+W
Sbjct: 492 ISKIYEREIIVRDRNRFHHFKEGACSCSDYW 522
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/398 (43%), Positives = 235/398 (59%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + E+L LFR + ++VT++++L AC LGALE G W+H YI K I+++
Sbjct: 248 YAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQIN 307
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL KDV+ ++IV AM G AL+ F EM
Sbjct: 308 VHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTE 367
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G KP ITF+G+L AC H GLV+E S F LM +KYGI P IEHYGC+V +LGRAG +
Sbjct: 368 TGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLE 427
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A L+KNM +A D + G LLG CR+H N++ E A+ L++ N G+YV+LSN Y+
Sbjct: 428 EAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYA 487
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
++ W+ V ++R LM E I+K GC IEVD VHEFV
Sbjct: 488 ATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEINS 547
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P VL D+ EE+KE +L +H+EKLAI FGL+S PG ++I+KNLRVC+D
Sbjct: 548 WLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNLRVCSD 607
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHT +IS++ R+ V+ DRNRFHHF++G CSC D+W
Sbjct: 608 CHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 17/166 (10%)
Query: 14 FREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG--------- 64
F+EV+ DK V+ LL H L G++ +P + K LG
Sbjct: 44 FQEVERFASLIDKSKSVAHLLQ-IHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVF 102
Query: 65 --MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
+V + +A+I ++A Y+ +M GV+P+A TF VL +CS L
Sbjct: 103 NTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS---LES 159
Query: 123 ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
++ H + K G+ + LV + R G + A +L MP
Sbjct: 160 GKVLHCQAI--KLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMP 203
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 169/398 (42%), Positives = 241/398 (60%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + + A LF +++ G+ +++TMVSLL C GAL++G W H YI K+ +EVD
Sbjct: 308 YAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVD 367
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V L AL +D+ T ++ M G G KAL+ F EM+
Sbjct: 368 VILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMET 427
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVKP+ ITF+G L ACSHAGLV E F M +G+ P +EHYGC+V +LGRAG +
Sbjct: 428 LGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLD 487
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A ++I++MP+ + + G +L AC+IH N E AA++LL L P N G V++SN Y+
Sbjct: 488 EAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYA 547
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
++ +W V +R+ + + IKK PG IEV+G+VH+F
Sbjct: 548 AANRWNDVAGMRKAVKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSK 607
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG++P+ S VL ++DEEEKETALN H+EKLA+ FGL+S PG IR++KNLR+C+D
Sbjct: 608 KLKEAGYLPDTSVVLHNIDEEEKETALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICDD 667
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHT T ++SK+Y R +V DRNRFHHF+ GSCSC +W
Sbjct: 668 CHTVTKLLSKIYKRVIIVRDRNRFHHFREGSCSCGGYW 705
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 23/186 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ + EE LF + + + + +TM+SL+++C +GA+++G LH YI++ +
Sbjct: 207 YIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMS 266
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L AL KDVMT TA+I A + A + F +M+
Sbjct: 267 LALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRD 326
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+P+ +T V +L C+ G +D F+ +K G+ + L+ + + G I+
Sbjct: 327 NGVRPNELTMVSLLSLCAVNGALDMG-KWFHAYIDKQGVEVDVILKTALIDMYAKCGDIS 385
Query: 159 KAEELI 164
A+ L
Sbjct: 386 GAQRLF 391
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 174/398 (43%), Positives = 235/398 (59%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EA+ LF ++Q + + D T+V +L AC LGALE+G W+ + + +
Sbjct: 289 YALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYN 348
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG AL KD + A+I LAM G + F +++
Sbjct: 349 PVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEK 408
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD TF+G+L C+HAGLVDE +FN M + + PSIEHYGC+V +LGRAG +
Sbjct: 409 LGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLD 468
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI+NMPM + V G LLGACRIH + + AE A +QL+EL P N G+YV+LSN YS
Sbjct: 469 EAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYS 528
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ KW + ++R M E+ I+KPPGC IEVDG+VHEF+
Sbjct: 529 ANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTK 588
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VP VLFD++EEEKE L H+EKLAI FGL+S P +IR++KNLRVC D
Sbjct: 589 KMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGD 648
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A +IS + RE V D NRFH F+ GSCSC D+W
Sbjct: 649 CHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 686
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 91/191 (47%), Gaps = 27/191 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----KN 56
Y+ EA+ +FR + L D T+V +L ACT LG L G W+H IM+ +N
Sbjct: 188 YIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRN 247
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ V L GM KD+++ A+I A+ G +A++ F +MQ
Sbjct: 248 VFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQR 307
Query: 99 RGVKPDAITFVGVLVACSHAGLVD--ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
VKPD T VGVL AC+ G ++ E +S +E + P + L+ + + G
Sbjct: 308 ENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNE-FLYNPVLGT--ALIDLYAKCGS 364
Query: 157 IAKAEELIKNM 167
+++A E+ K M
Sbjct: 365 MSRAWEVFKGM 375
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 83/190 (43%), Gaps = 25/190 (13%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V + ++A+ + ++ +G + T +L AC L L++G+ +H ++K + DV
Sbjct: 88 VSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDV 147
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ +L K+V++ TA+I G+ +A++ F +
Sbjct: 148 FVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEM 207
Query: 100 GVKPDAITFVGVLVACSHAG-LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ PD+ T V VL AC+ G L H +M + G+ ++ LV + + G +
Sbjct: 208 NLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIM--EMGMVRNVFVGTSLVDMYAKCGNME 265
Query: 159 KAEELIKNMP 168
KA + MP
Sbjct: 266 KARSVFDGMP 275
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/400 (42%), Positives = 240/400 (60%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y + +EALLLF+E+ G + + VTM+S+L AC HLGA+E+G W+H YI K+
Sbjct: 311 YTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVA 370
Query: 56 -----------------NIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+IE V + + + + A+I AM G+ N A + F M
Sbjct: 371 NASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRM 430
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ ++PD ITFVG+L ACSH+G++D F M E Y I P +EHYGC++ +LG +G
Sbjct: 431 RKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGL 490
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+AEE+I M M D + LL AC+++ N+E E AQ L+++ P N GSYV+LSN
Sbjct: 491 FKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNI 550
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+++ +W +V +IR L+ ++ +KK PGC IE+D VVHEF+
Sbjct: 551 YATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEM 610
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+AGFVP+ SEVL +M+EE KE AL H+EKLAI FGL+S PG + I+KNLRVC
Sbjct: 611 EVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVC 670
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+CH AT +ISK+Y RE + DR RFHHF++G CSC D+W
Sbjct: 671 RNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 23/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHP---------- 50
Y E +EAL LF+E+ + D+ TMVS++ AC ++E+G +H
Sbjct: 210 YAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSN 269
Query: 51 ----------YIMKKNIEVDVGL--GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
YI +E GL G++ KDV++ LI +AL F EM
Sbjct: 270 LKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 329
Query: 99 RGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G P+ +T + +L AC+H G ++ R H + G+ + H L+ + + G I
Sbjct: 330 SGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDI 389
Query: 158 AKAEELIKNM 167
A+++ ++
Sbjct: 390 EAAQQVFDSI 399
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 17/122 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ E+A +F + H+ D V+ +L+ G YI D
Sbjct: 148 YVQNGRLEDARKVFDQSSHR----DVVSYTALITGYASKG----------YIASAQKMFD 193
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+ +KDV++ A+I A G +ALE F EM V+PD T V V+ AC+ +
Sbjct: 194 ---EIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSAS 250
Query: 121 VD 122
++
Sbjct: 251 IE 252
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 168/393 (42%), Positives = 238/393 (60%), Gaps = 48/393 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK------------ 55
+EALLLF+E+ G + + VTM+S+L AC HLGA+++G W+H YI K+
Sbjct: 280 KEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLT 339
Query: 56 ----------NIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
+IE V M + + + A+I AM G+ N A + F +M+ G+ P
Sbjct: 340 SLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDP 399
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
D ITFVG+L ACSH+G++D F MS+ Y I P +EHYGC++ +LG G +A+E+
Sbjct: 400 DDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEM 459
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
I+ MPM D + LL AC++H+N+E E AQ L+++ P+N GSYV+LSN Y+++ +W
Sbjct: 460 IRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRW 519
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KA 259
+V +IR L+ ++ IKK PGC IE+D VVHEF+ +
Sbjct: 520 DQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREIYRMLEEMEMLMEET 579
Query: 260 GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
GFVP+ SEVL +M+EE KE AL H+EKLAI FGL+S PG + I+KNLRVC +CH AT
Sbjct: 580 GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEAT 639
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ISK+Y RE + DR R H K+G SC D+W
Sbjct: 640 KLISKIYKREIIARDRTRLHLLKDGVWSCHDYW 672
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 23/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN---- 56
YVE +EAL L++++ + D+ TMV+++ AC G++E+G LH +I
Sbjct: 172 YVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSN 231
Query: 57 ----------------IEVDVGL--GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+E GL G+A KDV++ LI +AL F EM
Sbjct: 232 IKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLR 291
Query: 99 RGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G P+ +T + VL AC+H G +D R H + G+ + L+ + + G I
Sbjct: 292 SGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDI 351
Query: 158 AKAEELIKNM 167
A+++ +M
Sbjct: 352 EAAKQVFDSM 361
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
+++KDV++ A+I +ALE + +M VKPD T V V+ AC+ +G + E
Sbjct: 157 ISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSI-EL 215
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ E +G +I+ L+ + + G + A L + +
Sbjct: 216 GRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGL 258
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 172/398 (43%), Positives = 237/398 (59%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V A+ LFRE+Q G+ D++TMVS+L AC LGALE+G W+ Y+ KKNI
Sbjct: 203 FVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKS 262
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V L AL D +++ T++I LAM G+G A+ F EM
Sbjct: 263 VELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVE 322
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD + F+GVL ACSH+GLVD+ +F M + I P +EHYGC+V +L R G +
Sbjct: 323 NGITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVK 382
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E ++ MP + + ++ AC L+ E +++L++ P + +YV+LSN Y+
Sbjct: 383 EAFEFVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYA 442
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
R+W+K ++RE+M R +KK PG +IEV+ ++EFV
Sbjct: 443 KLRQWEKKTKVREMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEMGR 502
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
KAG+VP S+VL D+DEE+KE AL H+EKLAI F L++ PG IRI+KNLRVC D
Sbjct: 503 EIKKAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLNTPPGTSIRIVKNLRVCED 562
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+AT ISKVYNRE VV DRNRFHHFKNG CSC+DFW
Sbjct: 563 CHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCRDFW 600
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 82/182 (45%), Gaps = 25/182 (13%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV-------- 61
+ L +R + G+T +K T +L C +G+L +G +H ++K E DV
Sbjct: 109 SFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIH 168
Query: 62 --------GLGMALK--------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
G A K D +T +A+I G ++A++ F EMQ+ GV PD
Sbjct: 169 MYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDE 228
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
IT V VL AC+ G + E EK I S+E L+ + + G + KA +L +
Sbjct: 229 ITMVSVLSACADLGAL-ELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFR 287
Query: 166 NM 167
M
Sbjct: 288 QM 289
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 173/400 (43%), Positives = 240/400 (60%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQ-HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
+V+ + EA LFR ++ K + D+ ++L ACT +GALE GMW+H Y+ K I +
Sbjct: 208 FVKGNRFREAFALFRRMRVEKKMELDRFVAATMLSACTGVGALEQGMWIHKYVEKTGIVL 267
Query: 60 DVGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
D L G+ +K V + +I AM G+G A+ F EM+
Sbjct: 268 DSKLATTIIDMYCKCGCLDKAFHVFCGLKVKRVSSWNCMIGGFAMHGKGEDAIRLFKEME 327
Query: 98 IRG-VKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
V PD+ITFV VL AC+H+GLV+E +F M + +GI P+ EHYGC+V +L RAGR
Sbjct: 328 EEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMVDVHGIDPTKEHYGCMVDLLARAGR 387
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A+++I MPM+ D VLG LLGACRIH NLE E +++EL P+N G YVIL N
Sbjct: 388 LEEAKKVIDEMPMSPDAAVLGALLGACRIHGNLELGEEVGNRVIELDPENSGRYVILGNM 447
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA----------------- 259
Y+S KW++V +R+LM +R +KK PG +IE++GVV+EFV
Sbjct: 448 YASCGKWEQVAGVRKLMDDRGVKKEPGFSMIEMEGVVNEFVAGGRDHPLAEAIYAKIYEM 507
Query: 260 -------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
GFVP+ VL D+ EEE+E L H+EKLAI +GL+ G +R+ KNLRVC
Sbjct: 508 LESIRVVGFVPDTDGVLHDLVEEERENPLFYHSEKLAIAYGLLKTKRGETLRVTKNLRVC 567
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A+ +ISKVY+ + ++ DR+RFHHF NG CSCKD+W
Sbjct: 568 KDCHQASKMISKVYDCDIIIRDRSRFHHFSNGECSCKDYW 607
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 172/397 (43%), Positives = 239/397 (60%), Gaps = 47/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V+ S E+A+ LFRE+Q +G+ D+VTM+ + AC +LGA E+ W+H YI K I D+
Sbjct: 441 VQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDM 500
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
L AL +DV TA I +AM G G A F +M I+
Sbjct: 501 RLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQ 560
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
GVKPD + FV VL ACSH G V++ + F+LM E +GI P IEHYGC+V +LGRAG + +
Sbjct: 561 GVKPDVVLFVQVLTACSHGGQVEQGLHIFSLM-EDHGISPQIEHYGCMVDLLGRAGLLRE 619
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A +LIK+MPM + V G LL ACR+H N+E A AA+++ EL P G +V+LSN Y+S
Sbjct: 620 AFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYAS 679
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK--------------------- 258
+ KW V R+R + E+ ++K PG ++V+GV+HEF
Sbjct: 680 AGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCR 739
Query: 259 ---AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
AG +P+ S VL D+DE+EKE L+ H+EKLAI FGL++ + IR++KNLR+C+DC
Sbjct: 740 FSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDC 799
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H+ + S +YNRE +V D NRFH F+ G CSC D+W
Sbjct: 800 HSFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 836
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 22/130 (16%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL----- 63
EA+LL+ + G+T + T +L CT + A G+ +H ++K +E DV +
Sbjct: 114 EAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLI 173
Query: 64 -----------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
GM+ ++V++ T+LI A + +A+ F+EM G++P ++
Sbjct: 174 HFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSV 233
Query: 107 TFVGVLVACS 116
T V V+ AC+
Sbjct: 234 TMVCVISACA 243
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 14/139 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y +EA+ LF E+ G+ VTMV ++ AC L L++G + YI +
Sbjct: 207 YARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGE------ 260
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
LG+ L VM + AL+ + CG + A F E V + + + +L + GL
Sbjct: 261 --LGLKLNKVM-VNALVDMYMKCGAIDAAKRLFDEC----VDRNLVLYNTILSNYARQGL 313
Query: 121 VDERISHFNLMSEKYGIRP 139
E ++ + M ++ G RP
Sbjct: 314 AREALAILDEMLQQ-GPRP 331
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 160/399 (40%), Positives = 248/399 (62%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y +++ E+A+ LF ++ +G+ ++ MVS++ +C HLGALE G + Y++K ++ V+
Sbjct: 224 YAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVN 283
Query: 61 VGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ LG AL D+ ++ +++I LA+ G +KA+ YF +M
Sbjct: 284 LILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMIS 343
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G P +TF VL ACSH GLV++ + + M + +GI P +EHYGC+V +LGRAG++A
Sbjct: 344 LGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLA 403
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE I M + + +LG LLGAC+I+ N E AER L+++ P++ G YV+LSN Y+
Sbjct: 404 EAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYA 463
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ +W K++ +R++M E+ +KKPPG LIE+DG +++F
Sbjct: 464 CAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEIL 523
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+ N + FD+DEEEKE+++++H+EKLAI +G++ PG IRI+KNLRVC
Sbjct: 524 GKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCE 583
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHT T +IS+VY RE +V DRNRFHHF+NG CSC+D+W
Sbjct: 584 DCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 327 bits (838), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 172/387 (44%), Positives = 236/387 (60%), Gaps = 48/387 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK--NIEVDVGLGM 65
+EALL+F+E+ G T + VTM+S+L AC HLGA+++G W+H YI KK I + L
Sbjct: 293 KEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQT 352
Query: 66 AL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
+L K + + A+I AM G+ + A + M+ G++P
Sbjct: 353 SLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEP 412
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
D ITFVG+L ACSHAGL D F M+ Y I P +EHYGC++ +LGR+G +AEEL
Sbjct: 413 DDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEEL 472
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
I +M M D + G LL AC+IH NLE E AQ+L+++ P N GSYV+LSN Y++S +W
Sbjct: 473 INSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARW 532
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KA 259
V R+R L+ ++ +KK PGC IE+D +VHEF+ +
Sbjct: 533 DDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAET 592
Query: 260 GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
GFV + SEVL +M+EE KE AL+ H+EKLAI FGL+S PG +RI+KNLRVC +CH AT
Sbjct: 593 GFVSDTSEVLQEMEEELKEGALSYHSEKLAIAFGLISTKPGTKLRIVKNLRVCRNCHEAT 652
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSC 346
+ISK+Y RE + DR+RFHHFK+G C
Sbjct: 653 KLISKIYKREIIARDRSRFHHFKDGMC 679
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 23/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E +EAL LF E+ + D+ TM ++L CTH G +E+G +H +I +
Sbjct: 185 YAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSN 244
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L G+ KDV++ LI A +AL F EM
Sbjct: 245 LKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLK 304
Query: 99 RGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G P+ +T + +L AC+H G +D R H + + GI + L+ + + G I
Sbjct: 305 LGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNI 364
Query: 158 AKAEELIKNM 167
A ++ +
Sbjct: 365 EAANQVFDTI 374
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
+ +KDV++ A+I A G+ +ALE F EM VKPD T VL C+H+G V E
Sbjct: 170 IPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNV-EL 228
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACR 184
+ + +G +++ L+ + + G + +A L + + D L+G
Sbjct: 229 GRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYK-DVISWNTLIGGYA 287
Query: 185 IHDNLEAAERAAQQLLEL 202
++ + A Q++L+L
Sbjct: 288 YINHHKEALLVFQEMLKL 305
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 327 bits (838), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 170/400 (42%), Positives = 240/400 (60%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y + +EALLLF+E+ G + VTM+S+L AC HLGA+++G W+H YI K+
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSAT 401
Query: 56 -----------------NIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+IE V + K + + A+I AM G+ + A + F M
Sbjct: 402 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRM 461
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ G++PD ITFVG+L ACS +G++D F M++ Y I P +EHYGC++ +LG +G
Sbjct: 462 RKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGL 521
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+AEE+I NM M D + LL AC+I N+E E AQ L+++ P+N G YV+LSN
Sbjct: 522 FKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNI 581
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+++ +W +V +IR L+ ++ +KK PGC IE+D VVHEF+
Sbjct: 582 YATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEM 641
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
KAGFVP+ SEVL +M+EE KE AL H+EKLAI FGL+S PG + I+KNLRVC
Sbjct: 642 EVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVC 701
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+CH AT +ISK+Y RE + DR RFHHF++G CSC D+W
Sbjct: 702 RNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y E +EAL LF+E+ + D+ TMV+++ AC G++E+G +H +I
Sbjct: 241 YAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSN 300
Query: 56 ---------------NIEVDVGL--GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+E GL G+ KDV++ LI +AL F EM
Sbjct: 301 LKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 360
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
G +P+ +T + +L AC+H G +D
Sbjct: 361 SGERPNDVTMLSILPACAHLGAID 384
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 17/122 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ E+A +F H+ D V+ +L+ G +E L I
Sbjct: 179 YVQNGRLEDARKVFDRSPHR----DVVSYTALIKGYASRGYIESAQKLFDEI-------- 226
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+KDV++ A+I A G +ALE F EM ++PD T V V+ AC+ +G
Sbjct: 227 -----PVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGS 281
Query: 121 VD 122
++
Sbjct: 282 IE 283
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 327 bits (838), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 166/400 (41%), Positives = 239/400 (59%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y + +EALLLF+++ G + VTM+S+L AC HLGA+++G W+H YI K+
Sbjct: 311 YTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVT 370
Query: 56 -----------------NIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+IE V M + + + A+I AM G+ N A + F M
Sbjct: 371 NASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRM 430
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ G++PD ITFVG+L ACSH+G++D F M+ Y + P +EHYGC++ + G +G
Sbjct: 431 RKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGL 490
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+AE++I M M D + LL AC++H N+E E AQ L+++ P+N GSYV+LSN
Sbjct: 491 FKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNI 550
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+++ +W +V + R L+ ++ +KK PGC IE+D VVHEF+
Sbjct: 551 YATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEM 610
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+AGFVP+ SEVL +M+EE KE AL H+EKLAI FGL+S PG + I+KNLRVC
Sbjct: 611 EVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVC 670
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+CH AT +ISK+Y RE + DR RFHHF++G CSC D+W
Sbjct: 671 RNCHEATKLISKIYKREIIARDRTRFHHFRDGECSCNDYW 710
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 23/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN---- 56
Y E +EAL LF+++ + D+ TMV++L AC G++E+G +H +I
Sbjct: 210 YAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXN 269
Query: 57 ----------------IEVDVGL--GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+E GL G++ KDV++ LI +AL F +M
Sbjct: 270 LKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLR 329
Query: 99 RGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G KP+ +T + +L AC+H G +D R H + G+ + L+ + + G I
Sbjct: 330 SGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDI 389
Query: 158 AKAEELIKNM 167
A+++ +M
Sbjct: 390 EAAQQVFDSM 399
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 17/122 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ E+A + + H+ D V+ +L+ G +E + M I V
Sbjct: 148 YVQNGRLEDAQKVXDKSSHR----DVVSYTALITGYASRGXIESA-----HKMFDEIPV- 197
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
KDV++ A I A G +ALE F +M V+PD T V VL AC+ +G
Sbjct: 198 -------KDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGS 250
Query: 121 VD 122
++
Sbjct: 251 IE 252
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 327 bits (838), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 171/393 (43%), Positives = 234/393 (59%), Gaps = 48/393 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK-----KNIEVDVG 62
EEAL LF + + + VT + +L AC LGAL++G W+H YI K N +
Sbjct: 346 EEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTS 405
Query: 63 L------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV-KP 103
L M +++ + A++ AM G +AL F EM +G+ +P
Sbjct: 406 LIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRP 465
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
D ITFVGVL AC+ AGLVD +F M + YGI P ++HYGC++ +L RA + +AE L
Sbjct: 466 DDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEIL 525
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
+KNM M D + G LL AC+ H +E E A++L +L P+N G++V+LSN Y+ + +W
Sbjct: 526 MKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRW 585
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KA 259
V RIR + ++ +KK PGC IE+DG VHEF+ +
Sbjct: 586 DDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEEN 645
Query: 260 GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
GFVPN SEVL+DMDEE KE AL+ H+EKLAI+FGL+ PG IRI+KNLRVC +CH+AT
Sbjct: 646 GFVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNCHSAT 705
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ISK++NRE + DRNRFHHFK+G CSC D W
Sbjct: 706 KLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 22/189 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ EEA++ F E+Q + +K TMV +L AC H + E+G W+ ++ +
Sbjct: 238 YVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSN 297
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L AL KDV++ +I + +AL F M
Sbjct: 298 LQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLR 357
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
VKP+ +TF+G+L AC+ G +D + + + + L+ + + G I
Sbjct: 358 SNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIE 417
Query: 159 KAEELIKNM 167
AE + ++M
Sbjct: 418 AAERVFRSM 426
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHA 118
+ +KDV++ A+I G+ +A+ FYEMQ V P+ T V VL AC H
Sbjct: 223 IPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHT 276
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 327 bits (838), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 171/393 (43%), Positives = 239/393 (60%), Gaps = 48/393 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK------------ 55
+EALLLF+E+ G T + VTM+S+L AC HLGA+++G W+H YI K+
Sbjct: 279 KEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT 338
Query: 56 ----------NIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
+IE V M K + + A+I AM G+ + + + F M+ G++P
Sbjct: 339 SLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEP 398
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
D ITFVG+L ACSH+G++D F M++ Y + P +EHYGC++ +LG +G +AEE+
Sbjct: 399 DDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEM 458
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
I M M D + LL AC++H N+E AE AQ L+++ P+N SY++LSN Y+S+ +W
Sbjct: 459 INTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRW 518
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KA 259
+ V RIR L+ + +KK PGC IEVD VV EFV +A
Sbjct: 519 EDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVGDKFHPQNREIYGMLEEMEVLLEEA 578
Query: 260 GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
GFVP+ SEVL +M+EE KE AL H+EKLAI FGL+S PG + I+KNLRVC +CH AT
Sbjct: 579 GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEAT 638
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
++SK+Y RE V DR RFHHF++G CSC D+W
Sbjct: 639 KLLSKIYKREIVARDRTRFHHFRDGVCSCNDYW 671
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 23/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN---- 56
Y E +EAL LF E+ + D+ T V++L AC H G++E+G +H ++
Sbjct: 171 YAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSN 230
Query: 57 ----------------IEVDVGL--GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+E GL G++ KDV++ LI +AL F EM
Sbjct: 231 LKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 290
Query: 99 RGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G P+ +T + VL AC+H G +D R H + G+ + L+ + + G I
Sbjct: 291 SGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDI 350
Query: 158 AKAEELIKNM 167
A ++ +M
Sbjct: 351 EAAHQVFNSM 360
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 18/167 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ E+A +F H+ D V+ +L+ G + L I
Sbjct: 109 YVQNWRLEDAYKVFDRSSHR----DVVSYTALITGYASRGDIRSAQKLFDEI-------- 156
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+KDV++ A+I A G +ALE F EM V+PD T+V VL AC+H+G
Sbjct: 157 -----PVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGS 211
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ E + + +G +++ L+ + + G + A L + +
Sbjct: 212 I-ELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGL 257
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 327 bits (837), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 169/399 (42%), Positives = 237/399 (59%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN---- 56
Y S EAL LFRE+Q + L VTM+S+L +C LGAL++G W+H Y+ K
Sbjct: 197 YARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRF 256
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
++VD L MA++D +A+I+ A+ G G KA+ F EM+
Sbjct: 257 VKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRK 316
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G +PD ITF+G+L ACSH GLV+E +F M +KYG+ P I+HYGC+V +LGRAGR+
Sbjct: 317 AGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLE 376
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E I +P+ + LL AC H N+E +R +Q+ EL +GG Y+ILSN +
Sbjct: 377 EAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCA 436
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ +W+ V +R+LM ER + K PGC +EV+ VVHEF
Sbjct: 437 RAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVK 496
Query: 260 -----GFVPNKSEVLF-DMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+VPN S V DM++EEKE L H+EKLAITFGL++ PG IR++KNLRVC
Sbjct: 497 ELKLVGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCG 556
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+A +IS +++R+ ++ D RFHHFK+G CSC+D+W
Sbjct: 557 DCHSAAKLISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 60/144 (41%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y A LF ++ GL D T SLL AC ALE G LH +K + +
Sbjct: 96 YARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSEN 155
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + L + V+T A+I A + N+AL F E+Q
Sbjct: 156 VYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQA 215
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
R +KP +T + VL +C+ G +D
Sbjct: 216 RNLKPTDVTMLSVLSSCALLGALD 239
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 326 bits (836), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 168/398 (42%), Positives = 234/398 (58%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ EALLLF +++ L D TMVSLL AC LGAL G LH I ++ +EVD
Sbjct: 345 YIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVD 404
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ LG AL +DV T +A+I LA G G ALEYF+ M++
Sbjct: 405 IYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKV 464
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G +P+++T++ +L ACSH+ L+DE +F M + IRP IEHYGC++ +LGR+G +
Sbjct: 465 DGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLD 524
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +L++ MPM + + +L ACR+H + A AA+ LL+L PD YV L N Y
Sbjct: 525 EAMDLVRTMPMQPNAVIWASILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYI 584
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
SR+W+ +IR LM ER +KK G I V G VH+F+
Sbjct: 585 DSRQWEDASQIRRLMEERGVKKAAGYSSITVAGQVHKFIVCDRTHPQIMEITAMMEEITR 644
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P S++ D+DEEEKE AL H+EK+AI FGL+S P + + IIKNLRVC D
Sbjct: 645 RLKSVGYSPITSQITVDVDEEEKEHALLAHSEKIAIAFGLISLAPNLPLHIIKNLRVCED 704
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A +IS+++NRE +V DR+RFHHF++G+CSC DFW
Sbjct: 705 CHSAIKLISRIWNREIIVRDRSRFHHFRDGTCSCNDFW 742
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 20/186 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y EA+ F + G+ D+VT++ LL AC L L G LH + +K
Sbjct: 212 YSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEK----- 266
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
G+ M+ K V+ ALI + A CG +A E F + RG +P ++ ++ G
Sbjct: 267 -GMLMSGKLVV---ALIDMYAKCGDIGRAWEVFDALG-RGRRPQ--SWNAMIDGYCKLGH 319
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM---PMALDHFVLG 177
VD F+ M ++ + + L+ GR+ +A L M + D+F +
Sbjct: 320 VDVARYLFDQMEDR-----DLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMV 374
Query: 178 GLLGAC 183
LL AC
Sbjct: 375 SLLTAC 380
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSH-AGLVDERIS 126
++V++ T LI + G+ +A++ F M G++PD +T +G+L AC+ LV R
Sbjct: 200 RNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSL 259
Query: 127 HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
H L+ EK G+ S + L+ + + G I +A E+ +
Sbjct: 260 H-KLVGEK-GMLMSGKLVVALIDMYAKCGDIGRAWEVFDAL 298
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 326 bits (836), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 238/398 (59%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EA+ LF+E+Q + + VT+VS+L A +GALE+G W+H Y K IE+D
Sbjct: 245 YAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEID 304
Query: 61 VGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG AL D+ +T +A+I AM G+ A+ +F+ M
Sbjct: 305 DVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGK 364
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV P+ + ++G+L ACSHAGLV+E S F+ M + G++P IEHYGC+V +LGRAG +
Sbjct: 365 AGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLE 424
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AEELI+NMP+ D + LLGAC++H NL+ ER A+ L+EL P + GSYV LSN Y+
Sbjct: 425 EAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYA 484
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S W+ V R+R M +I+K PGC IE+ G++HEF+
Sbjct: 485 SLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSM 544
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ PN EV + DE+E+ AL H+EK+A+ FGL+S P ++I+KNLR+C D
Sbjct: 545 KLRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICED 604
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH + +IS +Y R+ +V DR RFH F++GSCSC D+W
Sbjct: 605 CHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642
>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
Length = 706
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/398 (43%), Positives = 229/398 (57%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV EAL LF E++H G +VT+VS L AC LGALE G W+H + + +
Sbjct: 309 YVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLS 368
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL ++V T T+ + LAM G G L F M+
Sbjct: 369 VTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMES 428
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+P+ +TFV VL CS AGLVDE + F+ M +GI P +EHYGC+V + GRAGR+
Sbjct: 429 TGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLD 488
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A I MP+ V G LL A RIH N+E + A +L+ + N ++V+LSN Y+
Sbjct: 489 DAVNFINGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYA 548
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
S+ WK V +R +M + +KK PGC IEV G VHEF
Sbjct: 549 DSQNWKGVSNVRNMMKAKGVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQ 608
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G++ N EVLFD++EE+KE A++LH+EKLAI FGLV+ + IRI+KNLRVC D
Sbjct: 609 RLRLQGYIANTKEVLFDIEEEDKEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCED 668
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH T +ISKV+NRE V+ DRNRFHHFK+G+CSCKD+W
Sbjct: 669 CHDYTKMISKVFNREIVMRDRNRFHHFKDGACSCKDYW 706
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Query: 64 GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE 123
GM +D + A+I G+ +AL F EM+ G +T V L AC+ G + E
Sbjct: 293 GMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGAL-E 351
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
R + + G+R S+ L+ + + G +A A E+ +M
Sbjct: 352 RGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSM 395
>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
Length = 706
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/398 (43%), Positives = 229/398 (57%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV EAL LF E++H G +VT+VS L AC LGALE G W+H + + +
Sbjct: 309 YVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLS 368
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL ++V T T+ + LAM G G L F M+
Sbjct: 369 VTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMES 428
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+P+ +TFV VL CS AGLVDE + F+ M +GI P +EHYGC+V + GRAGR+
Sbjct: 429 TGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLD 488
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A I MP+ V G LL A RIH N+E + A +L+ + N ++V+LSN Y+
Sbjct: 489 DAVNFINGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYA 548
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
S+ WK V +R +M + +KK PGC IEV G VHEF
Sbjct: 549 DSQNWKGVSNVRNMMKAKGVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQ 608
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G++ N EVLFD++EE+KE A++LH+EKLAI FGLV+ + IRI+KNLRVC D
Sbjct: 609 RLRLQGYIANTKEVLFDIEEEDKEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCED 668
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH T +ISKV+NRE V+ DRNRFHHFK+G+CSCKD+W
Sbjct: 669 CHDYTKMISKVFNREIVMRDRNRFHHFKDGACSCKDYW 706
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Query: 64 GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE 123
GM +D + A+I G+ +AL F EM+ G +T V L AC+ G + E
Sbjct: 293 GMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGAL-E 351
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
R + + G+R S+ L+ + + G +A A E+ +M
Sbjct: 352 RGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSM 395
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 168/393 (42%), Positives = 236/393 (60%), Gaps = 48/393 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK------------ 55
+EALLLF+E+ G + VTM+S+L AC LGA++ G W+H YI K+
Sbjct: 318 KEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRT 377
Query: 56 ----------NIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
+IE V M + + A+I AM G+ N A + F M+ G++P
Sbjct: 378 SLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEP 437
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
D ITFVG+L ACSH+G++D F M++ Y I P +EHYGC++ +LG G +AEE+
Sbjct: 438 DDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEM 497
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
I M M D + LL AC++H N+E E AQ+L+++ P+N GSYV+LSN Y+++ +W
Sbjct: 498 INTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRW 557
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KA 259
+V IR L+ ++ +KK PGC IE+D VVHEF+ +A
Sbjct: 558 NEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEA 617
Query: 260 GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
GFVP+ SEVL +M+EE K+ AL H+EKLAI FGL+S PG + I+KNLRVC +CH AT
Sbjct: 618 GFVPDTSEVLQEMEEEFKQGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEAT 677
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ISK+Y RE + DR RFHHF++G CSC D+W
Sbjct: 678 KLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 23/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI----MKKN 56
Y + +EAL LF+E+ + D+ TMV+++ AC G++++G +H +I + N
Sbjct: 210 YADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSN 269
Query: 57 ----------------IEVDVGL--GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+E GL G++ KDV++ +I +AL F EM
Sbjct: 270 LKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLR 329
Query: 99 RGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G P+ +T + +L AC+ G +D R H + G+ + L+ + + G I
Sbjct: 330 SGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDI 389
Query: 158 AKAEELIKNM 167
A ++ +M
Sbjct: 390 EAAHQVFNSM 399
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 17/121 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ ++A +F H+ D V+ +L+ G +E + I
Sbjct: 148 YVKNGRWKDAHKVFDGSSHR----DVVSYTALITGYASRGYIESAQKMFDEI-------- 195
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+KDV++ A+I A G +AL+ F EM VKPD T V V+ AC+ +G
Sbjct: 196 -----PVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGS 250
Query: 121 V 121
+
Sbjct: 251 I 251
>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
Length = 699
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/398 (43%), Positives = 229/398 (57%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV EAL LF E++H G +VT+VS L AC LGALE G W+H + + +
Sbjct: 302 YVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLS 361
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL ++V T T+ + LAM G G L F M+
Sbjct: 362 VTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMES 421
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+P+ +TFV VL CS AGLVDE + F+ M +GI P +EHYGC+V + GRAGR+
Sbjct: 422 TGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLD 481
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A I MP+ V G LL A RIH N+E + A +L+ + N ++V+LSN Y+
Sbjct: 482 DAVNFINGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYA 541
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
S+ WK V +R +M + +KK PGC IEV G VHEF
Sbjct: 542 DSQNWKGVSNVRNMMKAKGVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQ 601
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G++ N EVLFD++EE+KE A++LH+EKLAI FGLV+ + IRI+KNLRVC D
Sbjct: 602 RLRLQGYIANTKEVLFDIEEEDKEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCED 661
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH T +ISKV+NRE V+ DRNRFHHFK+G+CSCKD+W
Sbjct: 662 CHDYTKMISKVFNREIVMRDRNRFHHFKDGACSCKDYW 699
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Query: 64 GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE 123
GM +D + A+I G+ +AL F EM+ G +T V L AC+ G + E
Sbjct: 286 GMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGAL-E 344
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
R + + G+R S+ L+ + + G +A A E+ +M
Sbjct: 345 RGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSM 388
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 164/398 (41%), Positives = 238/398 (59%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EA+ LF+E+Q + + VT+VS+L A +GALE+G W+H Y K +E+D
Sbjct: 245 YAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEID 304
Query: 61 VGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG AL D+ +T +A+I AM G+ A+ +F+ M
Sbjct: 305 DVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGK 364
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV P+ + ++G+L ACSHAGLV+E S F+ M + G++P IEHYGC+V +LGRAG +
Sbjct: 365 AGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLE 424
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AEELI+NMP+ D + LLGAC++H NL+ ER A+ L+EL P + GSYV LSN Y+
Sbjct: 425 EAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYA 484
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S W+ V R+R M +I+K PGC IE+ G++HEF+
Sbjct: 485 SLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSM 544
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ PN EV + DE+E+ AL H+EK+A+ FGL+S P ++I+KNLR+C D
Sbjct: 545 KLRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICED 604
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH + +IS +Y R+ +V DR RFH F++GSCSC D+W
Sbjct: 605 CHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/398 (42%), Positives = 233/398 (58%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EAL LF +Q +GL DKVT +++L AC + G+LE +H ++K D
Sbjct: 623 YAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSD 682
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG AL ++V++ A+I A G+G L+ F M++
Sbjct: 683 TSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKM 742
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD +TFV +L ACSHAGL++E +F MS +GI P+IEHYGC+V +LGRAG++
Sbjct: 743 EGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLD 802
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+ E LIK MP + + G LLGACRIH N+ AERAA+ L+L PDN YV LS+ Y+
Sbjct: 803 EVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYA 862
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
++ W ++R+LM +R + K PG IEV +H FV
Sbjct: 863 AAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTH 922
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VP+ V+ D+DE EKE A+ H+E+LAI +GL+S +PG IRI KNLRVC D
Sbjct: 923 AMKMEGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTLPGTPIRIFKNLRVCPD 982
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTAT I+K+ +RE V D NRFHHFK+G CSC D+W
Sbjct: 983 CHTATKFITKIVDREIVARDVNRFHHFKDGVCSCGDYW 1020
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 114/257 (44%), Gaps = 29/257 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
E EEA ++ ++Q +G+ +K+T V LL AC + AL G +H ++K D+
Sbjct: 422 AEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDI 481
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ AL KD+++ TA+I LA G G +AL F +MQ
Sbjct: 482 SVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQA 541
Query: 100 GVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KP+ +T+ +L ACS +D R H ++ + G+ LV + G +
Sbjct: 542 GLKPNRVTYTSILNACSSPAALDWGRRIHQQVI--EAGLATDAHVANTLVNMYSMCGSVK 599
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE--LLPDNGGSYVILSNR 216
A ++ M D ++G H+ + A + +L E L PD +Y+ + N
Sbjct: 600 DARQVFDRMTQR-DIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDK-VTYINMLNA 657
Query: 217 YSSSRKWKKVKRIRELM 233
++S + K I L+
Sbjct: 658 CANSGSLEWAKEIHSLV 674
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 100/239 (41%), Gaps = 27/239 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ EEAL L RE+Q GL + T + LL +C ALE G +H MK + D
Sbjct: 219 YVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFD 278
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + M K V++ T +I A CG A E F +MQ
Sbjct: 279 VNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQ 338
Query: 99 RGVKPDAITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV P+ IT++ VL A S A L + H ++++ G + LV + + G
Sbjct: 339 EGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNA--GHESDLAVGTALVKMYAKCGSY 396
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLL-ELLPDNGGSYVILSN 215
++ + + + D ++G N E A Q+ E + N +YVIL N
Sbjct: 397 KDCRQVFEKL-VNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLN 454
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 125/294 (42%), Gaps = 56/294 (19%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + E A +F+++Q +G+ +++T +++L A + AL+ G +H +I+ E D
Sbjct: 320 YADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESD 379
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL +D++ +I LA G +A E +++MQ
Sbjct: 380 LAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQR 439
Query: 99 RGVKPDAITFVGVLVACS-----------HAGLVDE----RISHFNLMSEKYG------- 136
G+ P+ IT+V +L AC H+ +V + IS N + Y
Sbjct: 440 EGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKD 499
Query: 137 --------IRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMA---LDHFVLGGLLGACRI 185
+R I + ++ L ++G A+A + ++M A + +L AC
Sbjct: 500 ARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSS 559
Query: 186 HDNLEAAERAAQQLLEL-LPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNI 238
L+ R QQ++E L + L N YS K +++ + M +R+I
Sbjct: 560 PAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDI 613
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/398 (43%), Positives = 232/398 (58%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWL-----------H 49
Y + +EAL LF ++ ++G D MV +L AC LGALE+G W +
Sbjct: 222 YASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGN 281
Query: 50 PYIMKKNIEV-----------DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
P + I++ +V GM KD++ A I LAM G A F +M+
Sbjct: 282 PVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEK 341
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD TFVG+L AC+HAGLVDE +FN M + + P IEHYGC+V +LGRAG +
Sbjct: 342 SGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLD 401
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +L+K+MPM + V G LLG CR+H + + E +QL+ L P N G+YV+LSN YS
Sbjct: 402 EAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALEPSNSGNYVLLSNIYS 461
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+S KW+ +IR +M+ER IKK PG IEVDGVVHEF+
Sbjct: 462 ASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTSHPLSEKIYAKLGELVK 521
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+G+VP VLFD++EEEKE + H+EKLAI FGL+S P IR++KNLRVC D
Sbjct: 522 DLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIAFGLISTAPNDKIRVVKNLRVCGD 581
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A IS+ RE +V D NRFH F +GSCSCKD+W
Sbjct: 582 CHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKDYW 619
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 64 GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE 123
GM KD+++ +++I A G +AL+ F++M G +PD VGVL AC+ G ++
Sbjct: 206 GMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALEL 265
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
NLM + + L+ + + GR+ A E+ + M
Sbjct: 266 GNWASNLMDRNEFLGNPVLGTA-LIDMYAKCGRMDSAWEVFRGM 308
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 174/405 (42%), Positives = 244/405 (60%), Gaps = 53/405 (13%)
Query: 1 YVEDSACEEALLLFREVQ-----HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK 55
YV +EAL LFRE+Q + ++ TM ++L AC LGALE G W+H YI K
Sbjct: 169 YVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKY 228
Query: 56 NIEVDVGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEY 92
++E+D+ LG AL KDV +A+I LAM G ++ +
Sbjct: 229 HVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQL 288
Query: 93 FYEMQIR-GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYIL 151
F EM + P+++TFVG+L AC H GL++E S+F +M E++GI PSI+HYGC+V +
Sbjct: 289 FSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLY 348
Query: 152 GRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYV 211
GR+G I +AE I +MPM D + G LL R+ +++ E A ++L+EL P N G+YV
Sbjct: 349 GRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYV 408
Query: 212 ILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------- 257
+LSN Y+ + +W +VK IR M + I K PGC +EV+GVVHEFV
Sbjct: 409 LLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYA 468
Query: 258 ----------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIK 307
+AG+V + EVL D++E++KE AL+ H+EKLAI F L+ PG +RIIK
Sbjct: 469 MLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIK 528
Query: 308 NLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
NLR+C DCH +ISK+++RE VV D NRFHHF++GSCSC+DFW
Sbjct: 529 NLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG-----VKPDAITFVGVLVACSHAG 119
M ++V++ + LI MCG+ +AL+ F EMQ+ V+P+ T VL AC G
Sbjct: 154 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213
Query: 120 LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ E+ + +KY + I L+ + + G + +A+ + +
Sbjct: 214 AL-EQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL 260
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 174/390 (44%), Positives = 240/390 (61%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EAL L+RE+ +G+ D TMVSLL AC LGAL +G +H Y++K + + AL
Sbjct: 220 EALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALL 279
Query: 69 D----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
D V++ T+LIV LA+ G GN+AL+ F E++ +G+KP I
Sbjct: 280 DLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEI 339
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFVGVL ACSH G++DE ++F M E+YGI P IEH+GC+V +L RAG++ A + I+N
Sbjct: 340 TFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRN 399
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP+ + + LLGAC IH +LE E A ++ L + G +V+LSN Y+S R+W V
Sbjct: 400 MPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDV 459
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GFV 262
+ +R++M + +KK PG L+E+ V+EF+ G+V
Sbjct: 460 QNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYV 519
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P VL D++EEEKETAL+ HTEK+AI F LV+ PG IRI+KNLRVC DCH A +I
Sbjct: 520 PRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLI 579
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SKV+ RE +V DR+RFHHFK+GSCSCKD+W
Sbjct: 580 SKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG--LVD 122
M+ +D + ++I A+ G N+AL + EM GV+PD T V +L AC G +
Sbjct: 197 MSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALG 256
Query: 123 ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
ER+ + + K G+ + L+ + + G A+++ M
Sbjct: 257 ERVHMYMV---KVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEM 298
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 165/389 (42%), Positives = 240/389 (61%), Gaps = 46/389 (11%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI------------ 57
A+ LFR++Q G+ D VTMVS+L ACT LGALE+G W+ YI K+ +
Sbjct: 195 AVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVD 254
Query: 58 ------EVDVGLG----MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
+VD LG M+ + +++ T++IV LAM G+G +A+ F EM+ G+ P+ I
Sbjct: 255 MFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIA 314
Query: 108 FVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
F+G+L ACSH+GLV+ +F+ M+ ++GI P IEHYGC+V +L RAG + +A E ++ M
Sbjct: 315 FIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERM 374
Query: 168 PMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVK 227
P+ + + L+ ACR+H L+ E ++QL+ P + +YV+LSN Y W+K
Sbjct: 375 PIEPNPIIWRTLISACRVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKS 434
Query: 228 RIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGFVP 263
+IR M ++ I+K PG +IE+D +HEF+ +AG+ P
Sbjct: 435 KIRVAMGKKGIQKVPGSTMIELDNEIHEFIVGDRSHNQYNEIIKMVNEMGREMKRAGYAP 494
Query: 264 NKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIIS 323
+EV D+DEE+KE AL+ H+EKLAI F L++ PG IRI KNLRVC DCH+A+ IS
Sbjct: 495 TTTEVFLDIDEEDKEDALSRHSEKLAIAFALLNTPPGSPIRITKNLRVCGDCHSASKFIS 554
Query: 324 KVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
K+YNRE V+ DR+RFHHF++G CSC DFW
Sbjct: 555 KIYNREIVMRDRSRFHHFRDGQCSCGDFW 583
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 25/191 (13%)
Query: 1 YVEDSACE-EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y E S + A+ + + G++ +K +L AC L L +G +H ++K +
Sbjct: 83 YAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKAVHGSLVKFGFDD 142
Query: 60 DV---------------GLGMALK--------DVMTLTALIVVLAMCGQGNKALEYFYEM 96
D+ G+ A K D +T TA+I A GQ A+ F +M
Sbjct: 143 DIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKM 202
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
QI GV PD +T V VL AC+ G + E EK + ++E LV + + G
Sbjct: 203 QIAGVCPDDVTMVSVLSACTDLGAL-ELGKWIESYIEKERVLKTVELSNALVDMFAKCGD 261
Query: 157 IAKAEELIKNM 167
+ KA L +NM
Sbjct: 262 VDKALGLFRNM 272
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 174/390 (44%), Positives = 240/390 (61%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EAL L+RE+ +G+ D TMVSLL AC LGAL +G +H Y++K + + AL
Sbjct: 220 EALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALL 279
Query: 69 D----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
D V++ T+LIV LA+ G GN+AL+ F E++ +G+KP I
Sbjct: 280 DLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEI 339
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFVGVL ACSH G++DE ++F M E+YGI P IEH+GC+V +L RAG++ A + I+N
Sbjct: 340 TFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRN 399
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP+ + + LLGAC IH +LE E A ++ L + G +V+LSN Y+S R+W V
Sbjct: 400 MPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDV 459
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GFV 262
+ +R++M + +KK PG L+E+ V+EF+ G+V
Sbjct: 460 QNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYV 519
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P VL D++EEEKETAL+ HTEK+AI F LV+ PG IRI+KNLRVC DCH A +I
Sbjct: 520 PRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLI 579
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SKV+ RE +V DR+RFHHFK+GSCSCKD+W
Sbjct: 580 SKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG--LVD 122
M+ +D + ++I A+ G N+AL + EM GV+PD T V +L AC G +
Sbjct: 197 MSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALG 256
Query: 123 ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
ER+ + + K G+ + L+ + + G A+++ M
Sbjct: 257 ERVHMYMV---KVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEM 298
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 167/399 (41%), Positives = 229/399 (57%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ +EAL LF E+Q+ + D V++ S L AC+ LGALE G W+H Y K +D
Sbjct: 218 YVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALEQGKWIHSYANKTRTRID 277
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L M K V TALI A G G +A+ F EMQ
Sbjct: 278 SVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVWTALISGYAYHGLGREAISKFLEMQN 337
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVKP+AITF VL ACS+ GLV+E S FN + Y ++P+IEHYGC+V +LGRAG +
Sbjct: 338 MGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERDYNLKPTIEHYGCMVDLLGRAGLLN 397
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A I+ MP+ + + G LL AC+IH N+E E+ + L+E+ ++GG YV ++N ++
Sbjct: 398 EANRFIQKMPLKPNAVIWGSLLKACQIHKNIELGEKIGEILIEMDSNHGGRYVHMANIHA 457
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+KW K R LM E+ + K PGC I ++G HEF+
Sbjct: 458 MGKKWDKAAETRRLMREQGVVKVPGCSAISLEGTTHEFLAGDRSHAEIQEIRTKWRFVRR 517
Query: 260 -----GFVPNKSEVLFDM-DEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+VP ++L D+ D+EEKE ++ H+EKLAIT+GL+ PG IRI+KNLRVC
Sbjct: 518 KLEENGYVPELEDMLLDLVDDEEKEAIVHQHSEKLAITYGLMKTKPGTTIRIMKNLRVCK 577
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH N+ISK+Y R+ V+ DR RFHHFK+G CSC D+W
Sbjct: 578 DCHKVMNLISKIYKRDIVMRDRTRFHHFKDGKCSCGDYW 616
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 21/162 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+ A LLF +Q D V+ S++ G +++ + L + +KN
Sbjct: 162 KHAHLLFDRIQEP----DAVSWNSVIKGYVKAGEMDMALTLFRKMPEKN----------- 206
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISH 127
+ ++ T +I G +AL+ F+EMQ V PD ++ L ACS G +++
Sbjct: 207 -NAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALEQGKW- 264
Query: 128 FNLMSEKYGIRPSIEHYGCLVYI--LGRAGRIAKAEELIKNM 167
+ S R I+ C V I + G + +A + KNM
Sbjct: 265 --IHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNM 304
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 166/399 (41%), Positives = 239/399 (59%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLF-REVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ +EA+ +F R +Q + ++VT+VS+L A + LG LE+G W+H Y K I +
Sbjct: 240 YAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRI 299
Query: 60 DVGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQ 97
D LG AL D V+T A+I LAM G+ N Y M+
Sbjct: 300 DDVLGSALVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRME 359
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G+ P +T++ +L ACSHAGLVDE S FN M G++P IEHYGC+V +LGRAG +
Sbjct: 360 KCGISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYL 419
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+AEELI NMPM D + LLGA ++H N++ RAA+ L+++ P + G+YV LSN Y
Sbjct: 420 EEAEELILNMPMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMY 479
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------- 258
+SS W V +R +M + +I+K PGC IE+DGV+HEF+
Sbjct: 480 ASSGNWDGVAAVRLMMKDMDIRKDPGCSWIEIDGVIHEFLVEDDSHSRAKDIHSMLEEIS 539
Query: 259 -----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G +P+ ++VL MDE+ KE+ L+ H+EK+A+ FGL+S P + I+KNLR+C
Sbjct: 540 NKLSLEGHMPDTTQVLLKMDEKHKESVLHYHSEKIAVAFGLISTPPKTPLCIVKNLRICE 599
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH++ +ISK+Y R+ V+ DR RFHHF++GSCSC D+W
Sbjct: 600 DCHSSMKLISKMYERKIVIRDRKRFHHFEHGSCSCMDYW 638
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 323 bits (829), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 169/396 (42%), Positives = 239/396 (60%), Gaps = 48/396 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y + +EALLLF+E+ G + ++VTM+S+L AC HLGA+++G W+H YI K+
Sbjct: 311 YTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVS 370
Query: 56 -----------------NIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+IE V M + + + A+I AM G+ N A + F M
Sbjct: 371 NPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRM 430
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ G++PD ITFVG+L ACSH+G++D F M+E Y I P +EHYGC++ +LG +G
Sbjct: 431 RKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGL 490
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+AEE+I +M M D + LL AC++H N+E E AQ L+++ P N GSYV+LSN
Sbjct: 491 FKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNI 550
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+++ +W +V + R L+ ++ +KK PGC IE+D VVHEF+
Sbjct: 551 YATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEM 610
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+AGFVP+ SEVL +M+EE KE AL H+EKLAI FGL+S PG + I+KNLRVC
Sbjct: 611 EVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVC 670
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSC 348
+CH AT +ISK+Y RE + DR RFHHF +G CSC
Sbjct: 671 RNCHEATKLISKIYKREIIARDRTRFHHFXDGVCSC 706
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 23/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHP---------- 50
Y E +EAL LF+E+ + D+ TMV++L AC ++E+G +H
Sbjct: 210 YAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSN 269
Query: 51 ----------YIMKKNIEVDVGL--GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
YI +E GL G++ KDV++ LI +AL F EM
Sbjct: 270 LKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 329
Query: 99 RGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G P+ +T + +L AC+H G +D R H + G+ L+ + + G I
Sbjct: 330 SGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDI 389
Query: 158 AKAEELIKNM 167
A+++ +M
Sbjct: 390 EAAQQVFDSM 399
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 17/122 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ E+A +F + H+ D V+ +L+ G YI D
Sbjct: 148 YVKNGRXEDARKVFDQSSHR----DVVSYTALIKGYASNG----------YIXSAQKMFD 193
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+ +KDV++ ALI A G +ALE F EM VKPD T V VL AC+ +
Sbjct: 194 ---EIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSAS 250
Query: 121 VD 122
++
Sbjct: 251 IE 252
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 323 bits (829), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 165/390 (42%), Positives = 238/390 (61%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EA+ LFRE+Q + D++TMVS+L ACT LGALE+G W+ YI + I V + AL
Sbjct: 217 EAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALI 276
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
K +++ T++IV +AM G+G +A F EM GV PD +
Sbjct: 277 DMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDV 336
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
F+G+L ACSH+GLV+ +F M +KY + P IEHYGC+V + R G + +A E ++N
Sbjct: 337 AFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRN 396
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP+ + +L L+ ACR H + E+ + L++ P + +YV+LSN Y+ + W+K
Sbjct: 397 MPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKK 456
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGFV 262
+IRE+M + +KK PG +IE+D ++EFV K+G+
Sbjct: 457 TKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYR 516
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ SEVL D++EE+KE +LN H+EKLAI FGL+ PG IRI+KNLRVC+DCH+A+ I
Sbjct: 517 PSTSEVLLDINEEDKEDSLNRHSEKLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSASKFI 576
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SK+Y+RE ++ DRNRFHHFK+G CSC DFW
Sbjct: 577 SKIYDREIIMRDRNRFHHFKSGQCSCGDFW 606
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV------ 61
++AL L+ + H + +K T +L AC L L +G +H ++K + D+
Sbjct: 114 DKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTM 173
Query: 62 ---------GLGMALK--------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
G+ A K D +T +A+I A G+ +A+ F EMQ+ V PD
Sbjct: 174 VHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPD 233
Query: 105 AITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
IT V +L AC+ G + E E++ I +E L+ + + G I+KA +L
Sbjct: 234 EITMVSMLSACTDLGAL-ELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLF 292
Query: 165 KNM 167
+ M
Sbjct: 293 RAM 295
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 323 bits (829), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 168/398 (42%), Positives = 229/398 (57%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL+LFR + ++VT++S+L AC LGALE G W+H YI I+ +
Sbjct: 178 YTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFN 237
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL KDV+ ++IV AM G +AL+ F M
Sbjct: 238 VHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCR 297
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ P ITF+G+L AC H+G V E FN M ++YGI P IEHYGC+V +LGRAG +
Sbjct: 298 MGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVE 357
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A EL+KNM + D + G LLGACR+H + E+ + L++ N G+Y++LSN Y+
Sbjct: 358 QAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYA 417
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ W V R+R +M + +KK PGC IEV+ VHEF+
Sbjct: 418 AVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEING 477
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P VL D+ E EKE +L +H+EKLAI FGL++ PG I+I+KNLRVC D
Sbjct: 478 WLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCAD 537
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH T +ISK+ R+ VV DRNRFHHF NGSCSC D+W
Sbjct: 538 CHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 575
>gi|413932592|gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays]
Length = 619
Score = 323 bits (828), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 174/398 (43%), Positives = 234/398 (58%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV +A+ LFRE+Q G+ D+VTM+ +L A LGALE+ W+ ++ K+ I
Sbjct: 222 YVRSGLSSDAVGLFREMQASGVRPDEVTMIGVLAAAADLGALELARWVGRFVEKEGIGKS 281
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V L GM + +++ T++I LAM G+G +A+ F EM+
Sbjct: 282 VTLCNALIDALAKCGDLDGAMAVFQGMKERTIVSWTSVIDALAMEGRGKEAVAVFEEMKT 341
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+PD + F+GVL ACSHAG+VDE +F M YGI P IEHYGC+V + GRAG +
Sbjct: 342 AGVRPDDVAFIGVLTACSHAGMVDEGYGYFESMRMAYGIDPKIEHYGCMVDMFGRAGMVE 401
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E + MPM + + L+ ACR H LE E + LL P + +YV+LSN Y+
Sbjct: 402 RAMEFVHKMPMKPNPIIWRTLVAACRAHGRLELGETITRNLLNEYPAHEANYVMLSNVYA 461
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+R+WK+ IR M++R IKK PGC L+E+DG VHEF+
Sbjct: 462 LTRRWKEKSEIRREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQWKEIYMMVEEMAR 521
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG + SEVL D+DEE+KE AL H+EKLAI F L+ PG +R++KNLRVC+D
Sbjct: 522 ELRRAGHISATSEVLLDLDEEDKEVALQWHSEKLAIAFVLLRTPPGTQVRVVKNLRVCSD 581
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A IS VYNRE +V DR+RFH FKNGSCSC DFW
Sbjct: 582 CHAAIKCISLVYNREIIVRDRSRFHRFKNGSCSCNDFW 619
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 22/109 (20%)
Query: 25 DKVTMVSLLLACT---------HLGALEVGMWLHPYIMKKNIEVDVGLG----------- 64
+K T LL AC H AL+ G Y+ I + G
Sbjct: 145 NKFTFPFLLKACAAFPGVGVQAHAAALKFGFTTDQYVSNTLIHMYSCFGGEFLGDARNVF 204
Query: 65 --MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGV 111
MA +T +A+I G + A+ F EMQ GV+PD +T +GV
Sbjct: 205 DRMAKSSAVTWSAMIGGYVRSGLSSDAVGLFREMQASGVRPDEVTMIGV 253
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 323 bits (828), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 168/398 (42%), Positives = 229/398 (57%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL+LFR + ++VT++S+L AC LGALE G W+H YI I+ +
Sbjct: 231 YTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFN 290
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL KDV+ ++IV AM G +AL+ F M
Sbjct: 291 VHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCR 350
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ P ITF+G+L AC H+G V E FN M ++YGI P IEHYGC+V +LGRAG +
Sbjct: 351 MGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVE 410
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A EL+KNM + D + G LLGACR+H + E+ + L++ N G+Y++LSN Y+
Sbjct: 411 QAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYA 470
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ W V R+R +M + +KK PGC IEV+ VHEF+
Sbjct: 471 AVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEING 530
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P VL D+ E EKE +L +H+EKLAI FGL++ PG I+I+KNLRVC D
Sbjct: 531 WLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCAD 590
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH T +ISK+ R+ VV DRNRFHHF NGSCSC D+W
Sbjct: 591 CHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 628
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 323 bits (828), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 172/401 (42%), Positives = 236/401 (58%), Gaps = 49/401 (12%)
Query: 1 YVEDSACEEALLLFREVQ--HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
Y + +EAL +FRE+Q G D+VT++S L AC LGA+++G W+H YI K+ I+
Sbjct: 450 YEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQ 509
Query: 59 VDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM 96
++ L +L KDV +A+I LAM G+G A+E F +M
Sbjct: 510 LNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDM 569
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
Q VKP+++TF +L ACSH+GLVDE F+ M YG+ P +HY C+V +LGRAG
Sbjct: 570 QETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGH 629
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A + I+ MP+A V G LLGAC IH NLE AE+A +LLE+ P N G+YV+LSN
Sbjct: 630 LEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNL 689
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+ + W+ V +R+ M + +KK GC IE+DG VHEF+
Sbjct: 690 YAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEI 749
Query: 258 -----KAGFVPNKSEVLFDMDEEE-KETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
G+V N +L ++EEE KE AL LH+EK+AI FGL+ IRI+KNLRV
Sbjct: 750 MARLRSHGYVANTLCMLQFVEEEEMKEKALKLHSEKMAIAFGLIRADSQQAIRIVKNLRV 809
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCHT ++SKVY R+ V+ DR RFHHF G CSC+D+W
Sbjct: 810 CRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQDYW 850
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 101/249 (40%), Gaps = 61/249 (24%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI------MK 54
+V+ ++AL LF ++++G+ + VTMVS++ AC L +G + YI M
Sbjct: 318 FVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMN 377
Query: 55 KNI------------EVDVGLG-----------------------------------MAL 67
N+ EV++ G M
Sbjct: 378 LNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPR 437
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQI--RGVKPDAITFVGVLVACSHAGLVD--E 123
KD+ LI G+ +AL F E+Q+ G +PD +T + L AC+ G +D E
Sbjct: 438 KDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGE 497
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGAC 183
I H + E+ + ++ L+ + ++G + KA E+ ++ D FV ++
Sbjct: 498 WI-HGYIKKERIQLNRNLA--TSLIDMYSKSGDVEKAIEVFHSIGNK-DVFVWSAMIAGL 553
Query: 184 RIHDNLEAA 192
+H EAA
Sbjct: 554 AMHGRGEAA 562
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACS 116
KD+++ +++ G +KAL+ F M+ GV P+A+T V V+ AC+
Sbjct: 306 KDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACA 354
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 166/398 (41%), Positives = 230/398 (57%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ +AL LF +++ G+ D T+VSLL AC LGAL G LH I ++ +E D
Sbjct: 345 YIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRIVEED 404
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL +DV T TA+I LA G G ALE F +M+
Sbjct: 405 VYLGTALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMKR 464
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G +P ++T++ VL ACSH+ L+DE HFN M + + P +EHYGC++ +L R+G +
Sbjct: 465 DGFQPTSVTYIAVLTACSHSSLLDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLD 524
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A L++ MPM + + G +L ACR+H N++ A AA+ LL+L P+ YV L N Y
Sbjct: 525 EAMHLVQTMPMQPNAVIWGSILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYI 584
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
SR+W KR+R LM ER +KK G I V G VH+FV
Sbjct: 585 DSRQWADAKRVRMLMEERGVKKTAGYSSITVAGQVHKFVANDQSHPWTLEIMAMMEEIAC 644
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P S + D+DEEEKE AL H+EK+AI FGL+S P + I I+KNLRVC D
Sbjct: 645 RLKSVGYSPVTSRIAVDVDEEEKEQALLAHSEKIAIAFGLISLPPSLPIHIVKNLRVCED 704
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A ++S+++NRE +V DR+RFHHF++G+CSC DFW
Sbjct: 705 CHSAIKLVSQLWNREIIVRDRSRFHHFRDGACSCNDFW 742
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 168/398 (42%), Positives = 229/398 (57%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL+LFR + ++VT++S+L AC LGALE G W+H YI I+ +
Sbjct: 165 YTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFN 224
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL KDV+ ++IV AM G +AL+ F M
Sbjct: 225 VHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCR 284
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ P ITF+G+L AC H+G V E FN M ++YGI P IEHYGC+V +LGRAG +
Sbjct: 285 MGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVE 344
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A EL+KNM + D + G LLGACR+H + E+ + L++ N G+Y++LSN Y+
Sbjct: 345 QAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYA 404
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ W V R+R +M + +KK PGC IEV+ VHEF+
Sbjct: 405 AVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEING 464
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P VL D+ E EKE +L +H+EKLAI FGL++ PG I+I+KNLRVC D
Sbjct: 465 WLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCAD 524
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH T +ISK+ R+ VV DRNRFHHF NGSCSC D+W
Sbjct: 525 CHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 562
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 173/401 (43%), Positives = 238/401 (59%), Gaps = 49/401 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ +EAL LF E+ G ++ T+ S L AC +L AL+ G W+H YI K I+++
Sbjct: 139 YVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMN 198
Query: 61 VGLGMALKD------------------------VMTLTALIVVLAMCGQGNKALEYFYEM 96
L +L D V A+I AM G+ +A++ F +M
Sbjct: 199 ERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQM 258
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
++ V P+ +TFV +L ACSH LV+E +F M+ YGI P IEHYGC+V +LGR+G
Sbjct: 259 KVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGL 318
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +AEE + NMPMA D + G LLGACRIH ++E +R + + EL D+ G +V+L+N
Sbjct: 319 LKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANL 378
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
YS+S +W + K +R+ + KK PGC IE++GV H+F+
Sbjct: 379 YSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEM 438
Query: 258 -----KAGFVPNKSEVLFDM-DEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
AG+VP EVL D+ DEE+KETAL+ H+EKLAI FGL++ PG IRI+KNLRV
Sbjct: 439 TTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNLRV 498
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH AT ISKVY RE +V DR R+HHFK+G CSCKD+W
Sbjct: 499 CADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 539
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 96/212 (45%), Gaps = 10/212 (4%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE- 123
M+ +DV++ T +I G +AL+ F+EM G P+ T L AC++ +D+
Sbjct: 124 MSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQG 183
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN-MPMALDHFVLGGLLGA 182
R H + +K I+ + L+ + + G I A ++ + + L + ++G
Sbjct: 184 RWIHVYI--DKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGG 241
Query: 183 CRIH-DNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKP 241
+H + EA + Q +E + N ++V L N S + ++ + + MA +P
Sbjct: 242 YAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEP 301
Query: 242 PGCILIEVDGVVHEFV-KAGFVPNKSEVLFDM 272
IE G + + + ++G + E +F+M
Sbjct: 302 E----IEHYGCMVDLLGRSGLLKEAEETVFNM 329
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 173/401 (43%), Positives = 238/401 (59%), Gaps = 49/401 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ +EAL LF E+ G ++ T+ S L AC +L AL+ G W+H YI K I+++
Sbjct: 224 YVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMN 283
Query: 61 VGLGMALKD------------------------VMTLTALIVVLAMCGQGNKALEYFYEM 96
L +L D V A+I AM G+ +A++ F +M
Sbjct: 284 ERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQM 343
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
++ V P+ +TFV +L ACSH LV+E +F M+ YGI P IEHYGC+V +LGR+G
Sbjct: 344 KVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGL 403
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +AEE + NMPMA D + G LLGACRIH ++E +R + + EL D+ G +V+L+N
Sbjct: 404 LKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANL 463
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
YS+S +W + K +R+ + KK PGC IE++GV H+F+
Sbjct: 464 YSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEM 523
Query: 258 -----KAGFVPNKSEVLFDM-DEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
AG+VP EVL D+ DEE+KETAL+ H+EKLAI FGL++ PG IRI+KNLRV
Sbjct: 524 TTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNLRV 583
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH AT ISKVY RE +V DR R+HHFK+G CSCKD+W
Sbjct: 584 CADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 624
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 96/212 (45%), Gaps = 10/212 (4%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE- 123
M+ +DV++ T +I G +AL+ F+EM G P+ T L AC++ +D+
Sbjct: 209 MSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQG 268
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN-MPMALDHFVLGGLLGA 182
R H + +K I+ + L+ + + G I A ++ + + L + ++G
Sbjct: 269 RWIHVYI--DKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGG 326
Query: 183 CRIH-DNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKP 241
+H + EA + Q +E + N ++V L N S + ++ + + MA +P
Sbjct: 327 YAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEP 386
Query: 242 PGCILIEVDGVVHEFV-KAGFVPNKSEVLFDM 272
IE G + + + ++G + E +F+M
Sbjct: 387 E----IEHYGCMVDLLGRSGLLKEAEETVFNM 414
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 166/398 (41%), Positives = 232/398 (58%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + E LLLFR++ + + ++VT++++L AC GALE G W+H YI I ++
Sbjct: 47 YAQHGLPNEGLLLFRQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGIN 106
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G +L KDV+ +++V AM G AL F EM +
Sbjct: 107 VRVGTSLIDMYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCM 166
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G +P ITF+GVL ACSHAGLV E F M ++YGI P +EHYGC+V +LGRAG +
Sbjct: 167 IGYQPTDITFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLE 226
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A EL+KNM + D + G LLGACR+H N+ E+ A+ L+ N G+YV+LSN Y+
Sbjct: 227 EAYELVKNMEIDQDPVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYA 286
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
++ W+ V R+R LM E +K PGC IEV+ VHEF+
Sbjct: 287 AAGNWEGVARVRTLMKESGFEKEPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEING 346
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P VL D+++ +KE +L +H+EKLA+ FGL++ PG I+I+KNLRVC D
Sbjct: 347 WLKTHGYTPQTDIVLHDLEDAQKERSLGVHSEKLALAFGLITTKPGTTIKIVKNLRVCAD 406
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH T +ISK+ R+ V+ DRNRFHHF NG CSC D+W
Sbjct: 407 CHAVTKLISKITGRKVVMRDRNRFHHFVNGLCSCGDYW 444
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 162/391 (41%), Positives = 238/391 (60%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
++A+ +FRE++ + + VT+VS+L A + LG+LE+G WLH Y I +D LG AL
Sbjct: 256 KDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSAL 315
Query: 68 KD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D V+T +A+I A+ GQ A++ F +M+ GV+P
Sbjct: 316 IDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSD 375
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+ ++ +L ACSH GLV+E +F+ M G+ P IEHYGC+V +LGR+G + +AEE I
Sbjct: 376 VAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFIL 435
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
NMP+ D + LLGACR+ N+E +R A L++++P + G+YV LSN Y+S W +
Sbjct: 436 NMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSE 495
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------------AGF 261
V +R M E++I+K PGC LI++DGV+HEFV AG+
Sbjct: 496 VSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGY 555
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P ++VL +++EE+KE L+ H+EK+A FGL+S PG IRI+KNLR+C DCH++ +
Sbjct: 556 RPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKL 615
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISKVY R+ V DR RFHHF++GSCSC D+W
Sbjct: 616 ISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
M + V++ +I ++ G A+E F EM+ ++P+ +T V VL A S G + E
Sbjct: 234 MRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSL-EL 292
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
+L +E GIR L+ + + G I KA + + +P
Sbjct: 293 GEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLP 336
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/398 (41%), Positives = 240/398 (60%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ + EAL +FRE+Q ++ D+ TMVS++ AC LGALE+G W+ Y+ ++ I++D
Sbjct: 252 YVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMD 311
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL +D T TA+I+ LA+ G G +A+E F+ M
Sbjct: 312 AFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIG 371
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
PD +TF+GVL AC+HAGLVD+ F M E Y I P++ HYGC++ + GRAG+I
Sbjct: 372 VSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKIT 431
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I MPM + + G LL ACR+H N E E ++LL++ P+N Y +LSN Y+
Sbjct: 432 EALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYA 491
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+W+ V+R+R + E+ IKK PGC LIE++G++HEFV
Sbjct: 492 KCNRWEDVRRLRHTIMEKGIKKEPGCSLIEMNGIIHEFVAGDQSHPMSKEIYCKLESIIN 551
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P+ +EV ++ EEEK+ L H+EKLAI F L+S P +IRI+KNLR+C D
Sbjct: 552 DLNNVGYFPDVTEVFVEVAEEEKQKVLFWHSEKLAIAFALLSSEPNTVIRIVKNLRMCLD 611
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A +IS++Y RE VV DR RFHHF++G CSCKD+W
Sbjct: 612 CHNAIKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 649
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 22/189 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTH-LGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EA F ++ G VT VS+L AC G + +GM +H + VG G+ L
Sbjct: 127 EACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRV--------VGSGV-L 177
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISH 127
D+ AL+ + A C A + F MQ+R V +++ +L + G VDE
Sbjct: 178 PDLRVENALVDMYAECADMESAWKLFDGMQVRSV----VSWTSLLSGLTRLGRVDEARDL 233
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP---MALDHFVLGGLLGACR 184
F M E+ + + ++ +A R +A E+ + M ++ D F + ++ AC
Sbjct: 234 FGRMPERDTV-----SWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACA 288
Query: 185 IHDNLEAAE 193
LE E
Sbjct: 289 QLGALEMGE 297
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 18/167 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E + E A LF +Q + + V+ SLL T LG ++ D
Sbjct: 190 YAECADMESAWKLFDGMQVRSV----VSWTSLLSGLTRLGRVDEAR-------------D 232
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+ M +D ++ TA+I + +ALE F EMQ V D T V V+ AC+ G
Sbjct: 233 LFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGA 292
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ E + + GI+ L+ + + G I +A ++ K+M
Sbjct: 293 L-EMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDM 338
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 169/397 (42%), Positives = 241/397 (60%), Gaps = 51/397 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y + +EALLLF+E+ G T + VTM+S+L AC HLGA+++G W+H YI KK
Sbjct: 298 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVV 357
Query: 56 -NI---------------EVDVGL-----GMALKDVMTLTALIVVLAMCGQGNKALEYFY 94
N+ ++D M+ + + T A+I AM G+ N A + F
Sbjct: 358 TNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFS 417
Query: 95 EMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRA 154
M++ G++PD ITFVG+L ACSH+G++D + F M+ Y I P +EHYGC++ +LG +
Sbjct: 418 RMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHS 477
Query: 155 GRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILS 214
G +AEE+I MPM D + LL AC+IH NLE E A++L+++ P N GSYV+LS
Sbjct: 478 GLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLS 537
Query: 215 NRYSSSRKWKKVKRIRELMAERNIKKP-PGCILIEVDGVVHEFV---------------- 257
N Y+++ +W +V +IR L+ ++ +KK PGC IE+D VVHEF+
Sbjct: 538 NIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGML 597
Query: 258 --------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNL 309
+AGFVP+ SEVL +M+EE +E AL H+EKLAI FGL+S PG + I+KNL
Sbjct: 598 EEMEVLLEEAGFVPDTSEVLQEMEEEWREGALRHHSEKLAIAFGLISTKPGTKLTIMKNL 657
Query: 310 RVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSC 346
RVC +CH AT +ISK+Y RE + DR RF HF++G C
Sbjct: 658 RVCKNCHEATKLISKIYKREIIARDRTRFXHFRDGVC 694
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 25/191 (13%)
Query: 1 YVEDSACEEALLLFREVQH-KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI----MKK 55
YVE +EAL LF+E+ + D+ TMV+++ AC ++E+G +H +I
Sbjct: 196 YVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFAS 255
Query: 56 NIEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
N+++ L G+ KDV++ LI +AL F EM
Sbjct: 256 NLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEML 315
Query: 98 IRGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEH-YGCLVYILGRAG 155
G P+ +T + +L AC+H G +D R H + + G+ ++ L+ + + G
Sbjct: 316 RSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCG 375
Query: 156 RIAKAEELIKN 166
I A+++ +
Sbjct: 376 DIDAAQQVFDS 386
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 69/168 (41%), Gaps = 19/168 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ E+A +F H+ D V+ +L+ G +E L I K
Sbjct: 134 YAQNGRLEDARKVFDISSHR----DVVSYTALIAGYVSRGYIESAQKLFDEIPGK----- 184
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYE-MQIRGVKPDAITFVGVLVACSHAG 119
DV++ A+I G +ALE F E M + V+PD T V V+ AC+ +
Sbjct: 185 --------DVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSD 236
Query: 120 LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ E H + +G +++ L+ + + G + A EL +
Sbjct: 237 SI-ELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGL 283
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 169/394 (42%), Positives = 238/394 (60%), Gaps = 47/394 (11%)
Query: 1 YVEDSACEEALLLFREVQHKG-LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ +A+ LFR++QH+G L + VT+VS+L AC HLGAL++G W+H +I + IEV
Sbjct: 265 YAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEV 324
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ LG AL +DV++ + +I+ LAM G N+A +F EM
Sbjct: 325 GLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMI 384
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G++P+ I+F+G+L AC+HAGLVD+ + +F++M + YGI P IEHYGC+V +L RAGR+
Sbjct: 385 EDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRL 444
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+AE LI +MPM + V G LLG CRI+ + E ER ++LEL ++ GS V L+N Y
Sbjct: 445 DQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVY 504
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------- 258
+S + R M + K PGC IE++ V+EF
Sbjct: 505 ASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELK 564
Query: 259 -----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
AG+ P V+ ++DEEEKE AL+ H+EKLA+ FGL++ G IRI+KNLRVCN
Sbjct: 565 WKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCN 624
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCS 347
DCH A IISK+ RE VV DR+RFHHFK+G CS
Sbjct: 625 DCHDAIKIISKIVEREIVVRDRSRFHHFKDGKCS 658
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 64 GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR-GVKPDAITFVGVLVACSHAGLVD 122
M +++V++ A+I A + A+E F +MQ G+ P+ +T V VL AC+H G +D
Sbjct: 249 NMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALD 308
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 18/145 (12%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKDVMTLTALIVVLAMCG 84
D+ T S+L AC L + G +H ++ K E ++ +L+ + G
Sbjct: 126 DEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCE---------SNLFVRNSLVDLYFKVG 176
Query: 85 QGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHY 144
A + F EM +R D +++ ++ +G+VD+ F+ M EK ++ +
Sbjct: 177 CNCIAQKLFDEMVVR----DVVSWNTLISGYCFSGMVDKARMVFDGMMEK-----NLVSW 227
Query: 145 GCLVYILGRAGRIAKAEELIKNMPM 169
++ R G + +A +L +NMPM
Sbjct: 228 STMISGYARVGNLEEARQLFENMPM 252
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 164/399 (41%), Positives = 240/399 (60%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQH-KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
YV+++ EAL LFREV + ++VT+++++ AC LG LE G W+H YI +
Sbjct: 256 YVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGH 315
Query: 60 DVGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
V L M+ KD+++ +++ LA+ G G +AL F+ MQ
Sbjct: 316 SVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQ 375
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
++PD ITF+GVL ACSHAGLV E F + YG+R EHYGC+V +L RAG +
Sbjct: 376 TTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLL 435
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
A+A E I+ MP+ D + G +LGACR+++NLE E AA+ LLEL P N G Y++LSN Y
Sbjct: 436 AEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIY 495
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
+ + W +VK++RELM E+ I+K PGC + +D + H F+
Sbjct: 496 ARRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVR 555
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+V + SEVL ++D+ +KE +++ H+EKLA+ +GL+ G I I+KNLRVC+
Sbjct: 556 EKLKLVGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCS 615
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHT ++SK+Y R+ + DRNRFHHFK+GSCSC+D+W
Sbjct: 616 DCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 26/192 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+++ EALLL+++++ G + D+VTM +L+ AC L L VGM LH +I + ++++
Sbjct: 155 YMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKIC 214
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ- 97
LG AL KDV +ALI + +AL+ F E+
Sbjct: 215 AVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAG 274
Query: 98 IRGVKPDAITFVGVLVACSHAG-LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
++P+ +T + V+ AC+ G L R H + + G S+ + L+ + + G
Sbjct: 275 GSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNN--SLIDMFSKCGD 332
Query: 157 IAKAEELIKNMP 168
I A+ + +M
Sbjct: 333 IDAAKRIFDSMS 344
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 320 bits (821), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 162/390 (41%), Positives = 234/390 (60%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LF ++Q + ++VT+V+L+ AC++LGAL G W H Y+++ N++++ +G AL
Sbjct: 202 EALHLFCDMQLSQIKPNEVTLVALISACSNLGALSQGAWAHGYVLRNNLKLNRFVGTALV 261
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+D A+I A+ G GN+ALE + M++ + PD
Sbjct: 262 DMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQALELYRNMKLEDLVPDGA 321
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
T V + ACSH GLV+E + F M +G+ P +EHYGCL+ +LGRAGR+ +AEE +++
Sbjct: 322 TIVVTMFACSHGGLVEEGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAGRLKEAEERLQD 381
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MPM + + LLGA ++H NLE E A + L+EL P+ G+YV+LSN Y+S +W V
Sbjct: 382 MPMKPNAILWRSLLGAAKLHGNLEMGEAALKHLIELEPETSGNYVLLSNMYASIGRWNDV 441
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GFV 262
KR+R LM + + K PG L+E++G +HEF+ G
Sbjct: 442 KRVRMLMKDHGVDKLPGFSLVEINGAMHEFLTGDKAHPFSKEIYSKIGEINRRLLEYGHK 501
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P SEVLFD++EE+KE L+ H+E+LAI F L++ + IRIIKNLRVC DCH T +I
Sbjct: 502 PRTSEVLFDVEEEDKEDFLSYHSERLAIAFALIASSSSMPIRIIKNLRVCGDCHAITKLI 561
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S Y R+ +V DRNRFHHFK+GSCSC D+W
Sbjct: 562 SAAYQRDIIVRDRNRFHHFKDGSCSCLDYW 591
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 320 bits (821), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 169/399 (42%), Positives = 241/399 (60%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----K 55
Y ++ +A +F ++ G ++VT+ +LLLAC H GAL VGM LH ++K
Sbjct: 268 YAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVN 327
Query: 56 NIEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
N+ + + GM K+V + TA+I M G +AL+ FY+M
Sbjct: 328 NVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMI 387
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GVKP+ ITF+ VL ACSHAG ++E FN MS +Y + P +EHYGC+V +LGRAG I
Sbjct: 388 WAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYI 447
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A LIK+M + D + G LL ACRIH ++E AE +A++L +L P N G YV+L+N Y
Sbjct: 448 KEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIY 507
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ + +WK V+R+R L+ +R + KPPG L+E+ G VH F+
Sbjct: 508 ADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELS 567
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+AG+VPN + VL D+DEEEKE + +H+EKLA+ FG+++ +PG I +IKNLRVC
Sbjct: 568 VKLQEAGYVPNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKNLRVCG 627
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHT +ISK+ +RE +V D RFHHFK+G CSC D+W
Sbjct: 628 DCHTVIKLISKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 32/151 (21%)
Query: 1 YVEDSACEEALLLFREV---------QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPY 51
YV++ EAL++F+E + G + D V M+S+L AC+ + V +H
Sbjct: 158 YVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGV 217
Query: 52 IMKKNIEVDVGL----------------------GMALKDVMTLTALIVVLAMCGQGNKA 89
+K ++ +G+ MA KDV++ ++I V A G A
Sbjct: 218 AIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDA 277
Query: 90 LEYFYEM-QIRGVKPDAITFVGVLVACSHAG 119
E F+ M + G K + +T +L+AC+H G
Sbjct: 278 FEVFHGMLKAGGGKYNEVTLSTLLLACAHEG 308
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 320 bits (821), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 170/399 (42%), Positives = 234/399 (58%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----KN 56
Y S EAL LFR++Q + L + VT++S+L +C LGAL++G W+H Y+ K K
Sbjct: 203 YARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKY 262
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
++V+ L M+++D +A+IV AM GQG + F EM
Sbjct: 263 VKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMAR 322
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V+PD ITF+G+L ACSH GLVDE +F MSE YGI P I+HYGC+V +LGRAG +
Sbjct: 323 AKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLH 382
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I +P+ + LL +C H NLE A++ Q+LEL +GG YVILSN +
Sbjct: 383 EAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCA 442
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ KW+ V +R+LM + K PGC IEVD VVHEF
Sbjct: 443 RAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELVK 502
Query: 260 -----GFVPNKSEVLF-DMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+VP+ S V+ DM++EEKE L H+EKLAI+FGL++ PG IR++KNLRVC
Sbjct: 503 ELKSVGYVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFGLLNTPPGTTIRVVKNLRVCG 562
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+A +IS + +RE ++ D RFHHFK+G CSC D+W
Sbjct: 563 DCHSAAKLISSLIDREIILRDVQRFHHFKDGKCSCGDYW 601
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLH----------- 49
Y +A +A+ LF + + L D T SLL AC A + G LH
Sbjct: 102 YSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLGLNEN 161
Query: 50 PYIMKKNIEV-----DVGLGMALKD------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
PY+ I + DV + D V++ A+I A + N+AL F ++Q
Sbjct: 162 PYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQA 221
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
R +KP+ +T + VL +C+ G +D
Sbjct: 222 RKLKPNDVTVLSVLSSCALLGALD 245
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 320 bits (820), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 166/398 (41%), Positives = 236/398 (59%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ EALLLF ++ L D T+V+LL AC LGAL+ G LH I ++ +E D
Sbjct: 347 YIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEAD 406
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ LG AL +DV T TA+I LA G G ALE+FY+M+
Sbjct: 407 IYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRC 466
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G +P++++++ VL ACSH+ L++E +F+ M Y I P IEHYGC++ +LGR+G +
Sbjct: 467 DGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLD 526
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +L+K MP+ + + +L ACR+H +++ A+ AA+ LL+L PD G YV L N Y
Sbjct: 527 EAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYI 586
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
SR+W+ +IR LM ER +KK G I V G VH+FV +
Sbjct: 587 DSRQWENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISH 646
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P S++ D+DEEEKE AL H+EKLAI FGL++ P + + I KNLRVC D
Sbjct: 647 RLKSLGYSPLTSQITVDVDEEEKEQALLAHSEKLAIAFGLINLAPNLPVHIRKNLRVCED 706
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A +IS+++NRE +V DR+RFHHF+ G+CSC DFW
Sbjct: 707 CHSAIKLISRLWNREIIVRDRSRFHHFREGTCSCNDFW 744
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 20/186 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EA+ F+ + G+ D+VT++++L AC L LE+G LH + +K +
Sbjct: 214 YSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTS 273
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
L + ALI + A CG A + F + RG +P + + + C H G
Sbjct: 274 ENL---------VVALIDMYAKCGDFGHAQQVFDALG-RGPRPQSWNAI-IDGYCKH-GH 321
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM---PMALDHFVLG 177
VD S F+ M + I + ++ +G++ +A L +M + +D+F +
Sbjct: 322 VDVARSLFDEMEVR-----DIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVV 376
Query: 178 GLLGAC 183
LL AC
Sbjct: 377 NLLTAC 382
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 67 LKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERIS 126
++DV++ T+LI + + +A+ F M G+ PD +T + VL AC A L D +
Sbjct: 201 VRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSAC--AKLKDLELG 258
Query: 127 H-FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+L+ E+ G+ S L+ + + G A+++ +
Sbjct: 259 RSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDAL 300
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 320 bits (820), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 171/400 (42%), Positives = 241/400 (60%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQ-HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ +EAL +FRE+Q +K ++VT+ S L AC LGA+++G W+H YI K+ I++
Sbjct: 339 YQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKL 398
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ + +L +DV +A+I LAM G G A++ F +MQ
Sbjct: 399 NFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQ 458
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
VKP+A+TF +L ACSH+GLVDE FN M YG+ P +HY C+V ILGRAG +
Sbjct: 459 ETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCL 518
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A ELI+ MP+ V G LLGACRI+ N+E AE A +LLE +N G+YV+LSN Y
Sbjct: 519 EEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIY 578
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ + KW V R+R+ M ++K PGC IEV+G++HEF+
Sbjct: 579 AKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIV 638
Query: 258 ----KAGFVPNKSEVLFDMDEEE-KETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
G+V ++S +L ++EE KE ALNLH+EKLAI +GL+ P IRI+KNLRVC
Sbjct: 639 ARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRMEPSQPIRIVKNLRVC 698
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+ +ISK+YNR+ ++ DR RFHHF G+CSC D+W
Sbjct: 699 GDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 56/246 (22%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V+ + EEAL LF+ ++ + ++VTMV +L AC LE G W YI + I+++
Sbjct: 207 FVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDIN 266
Query: 61 VGLGMAL----------------------KDVMTLT------------------------ 74
+ L A+ KD+++ T
Sbjct: 267 LILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPR 326
Query: 75 -------ALIVVLAMCGQGNKALEYFYEMQI-RGVKPDAITFVGVLVACSHAGLVDERIS 126
ALI G+ +AL F E+Q+ + KP+ +T L AC+ G +D
Sbjct: 327 EDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLG-G 385
Query: 127 HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIH 186
++ +K GI+ + L+ + + G + KA E+ ++ D FV ++ +H
Sbjct: 386 WIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERR-DVFVWSAMIAGLAMH 444
Query: 187 DNLEAA 192
+ AA
Sbjct: 445 GHGRAA 450
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 23/131 (17%)
Query: 9 EALLLFREVQHKGLT-GDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+ LL+F ++ H+ + T ++ A T + +L G +H +MK + D+ + +L
Sbjct: 113 QGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSL 172
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
KD+++ ++I G +AL+ F M++ +P+
Sbjct: 173 IHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNR 232
Query: 106 ITFVGVLVACS 116
+T VGVL AC+
Sbjct: 233 VTMVGVLSACA 243
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 320 bits (820), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 241/398 (60%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V + AL FR +Q + + ++ T+V +L AC+ LGALE+G W+H Y+ K IE++
Sbjct: 253 FVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELN 312
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL +DV+T +I L+M G+ +A+E F M
Sbjct: 313 LFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIG 372
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
R ++P +TFVGVL ACSH GLVD F+ M+ YG+ P IEHYGC+V +LGR GR+
Sbjct: 373 RRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLE 432
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI+ M M DH +LG LL AC++H NLE E+ A+ L + + G+YV+LS+ Y+
Sbjct: 433 EAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYA 492
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
SS KWK+ ++R M E ++K PGC IEV+ +HEF+
Sbjct: 493 SSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKLEELNR 552
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P K VL D+++ EKE AL +H+E+LAI +GL+S P +IR++KNLRVC D
Sbjct: 553 LLRLEGYHPEKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEPCTVIRVMKNLRVCYD 612
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A +I+K+ R+ VV DRNRFH+F+NG+CSC D+W
Sbjct: 613 CHSAIKLIAKITRRKVVVRDRNRFHYFENGACSCGDYW 650
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD-ERIS 126
KD + TA+I + N+ALE F MQ V+P+ T V VL ACS G ++ R
Sbjct: 241 KDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWV 300
Query: 127 HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
H + K+ I ++ L+ + R G I +A+ + M
Sbjct: 301 HSYM--RKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEM 339
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 320 bits (819), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 164/399 (41%), Positives = 227/399 (56%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ +EAL LF E+Q+ + D V++ + L AC LGALE G W+H Y+ K I +D
Sbjct: 222 YVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMD 281
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG L K V TALI A G G +A+ F EMQ
Sbjct: 282 SVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQK 341
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KP+ ITF VL ACS+ GLV+E F M Y ++P+IEHYGC+V +LGRAG +
Sbjct: 342 MGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLD 401
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A+ I+ MP+ + + G LL ACRIH N+E E + L+ + P +GG YV +N ++
Sbjct: 402 EAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHA 461
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+KW K R LM E+ + K PGC I ++G HEF+
Sbjct: 462 MDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRR 521
Query: 260 -----GFVPNKSEVLFDM-DEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+VP E+L D+ D++E+E ++ H+EKLAIT+GL+ PG +IRI+KNLRVC
Sbjct: 522 KLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCK 581
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH T +ISK+Y R+ V+ DR RFHHF++G CSC D+W
Sbjct: 582 DCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 82/215 (38%), Gaps = 58/215 (26%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE--------- 58
E +LLL++ + + T SLL AC++L A E +H I K E
Sbjct: 97 ERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSL 156
Query: 59 ----------------------------------------VDVGLG----MALKDVMTLT 74
+D+ L MA K+ ++ T
Sbjct: 157 INSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWT 216
Query: 75 ALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSE 133
+I +AL+ F+EMQ V+PD ++ L AC+ G +++ + H L
Sbjct: 217 TMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKT 276
Query: 134 KYGIRPSIEHYGC-LVYILGRAGRIAKAEELIKNM 167
+ + + GC L+ + + G + +A E+ KN+
Sbjct: 277 RIRMDSVL---GCVLIDMYAKCGEMEEALEVFKNI 308
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 320 bits (819), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 174/390 (44%), Positives = 236/390 (60%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----KNIEVDVGL- 63
EAL LFRE+ +G+ D T+VSLL A LGALE+G +H Y++K KN V L
Sbjct: 202 EALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLL 261
Query: 64 -----------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
M+ ++ ++ T+LIV LA+ G G +ALE F EM+ +G+ P I
Sbjct: 262 DLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEI 321
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFVGVL ACSH G++DE +F M E+ GI P IEHYGC+V +L RAG + +A E I+N
Sbjct: 322 TFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQN 381
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP+ + + LLGAC IH +L E A LL L P + G YV+LSN Y+S R+W V
Sbjct: 382 MPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDV 441
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GFV 262
+ IR M + +KK PG L+E+ V+EF G+V
Sbjct: 442 QVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLEGYV 501
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ + VL D++EEEKE AL+ H+EK+AI F L++ PG IR++KNLRVC DCH A +I
Sbjct: 502 PHTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAIKLI 561
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+K+Y+RE V+ DR+RFHHF+ GSCSCKD+W
Sbjct: 562 AKIYDREIVIRDRSRFHHFRGGSCSCKDYW 591
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD-E 123
M +D++ ++I A+ G+ N+AL F EM + GV+PD T V +L A + G ++
Sbjct: 179 MKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELG 238
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
R H L+ K G+ + L+ + + G I +A+ + M
Sbjct: 239 RRVHVYLL--KVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEM 280
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 164/398 (41%), Positives = 241/398 (60%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V + AL FR +Q + + ++ T+V +L AC+ LGALE+G W+H Y+ K IE++
Sbjct: 253 FVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELN 312
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL +DV+T +I L+M G+ +A+E F M
Sbjct: 313 LFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVG 372
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
R ++P +TFVGVL ACSH GLVD F+ M+ Y + P IEHYGC+V +LGR GR+
Sbjct: 373 RRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLE 432
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI+ M M DH +LG LL AC++H NLE E+ A++L + + G+YV+LS+ Y+
Sbjct: 433 EAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYA 492
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
SS KWK+ ++R M E ++K PGC IEV+ +HEF+
Sbjct: 493 SSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNR 552
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P K VL D+++ EKE AL +H+E+LAI +GL+S P +IR++KNLRVC D
Sbjct: 553 LLRLEGYHPEKEVVLQDIEDGEKEWALAMHSERLAICYGLISTEPCTMIRVMKNLRVCYD 612
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A +I+K+ R+ VV DRNRFH+F+NG+CSC D+W
Sbjct: 613 CHSAIKLIAKITRRKIVVRDRNRFHYFENGACSCGDYW 650
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD-ERIS 126
KD + TA+I + N+ALE F MQ V+P+ T V VL ACS G ++ R
Sbjct: 241 KDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWV 300
Query: 127 HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
H + K+ I ++ L+ + R G I +A+ + M
Sbjct: 301 HSYM--RKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEM 339
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 241/398 (60%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V + AL FR +Q + + ++ T+V +L AC+ LGALE+G W+H Y+ K IE++
Sbjct: 210 FVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELN 269
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL +DV+T +I L+M G+ +A+E F M
Sbjct: 270 LFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIG 329
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
R ++P +TFVGVL ACSH GLVD F+ M+ YG+ P IEHYGC+V +LGR GR+
Sbjct: 330 RRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLE 389
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI+ M M DH +LG LL AC++H NLE E+ A+ L + + G+YV+LS+ Y+
Sbjct: 390 EAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYA 449
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
SS KWK+ ++R M E ++K PGC IEV+ +HEF+
Sbjct: 450 SSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKLEELNR 509
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P K VL D+++ EKE AL +H+E+LAI +GL+S P +IR++KNLRVC D
Sbjct: 510 LLRLEGYHPEKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEPCTVIRVMKNLRVCYD 569
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A +I+K+ R+ VV DRNRFH+F+NG+CSC D+W
Sbjct: 570 CHSAIKLIAKITRRKVVVRDRNRFHYFENGACSCGDYW 607
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 29/186 (15%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK-------------- 54
+A+ L+ + H + D M S+L AC AL G +H +K
Sbjct: 113 DAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIM 172
Query: 55 ------------KNIEVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVK 102
+ + ++ + KD + TA+I + N+ALE F MQ V+
Sbjct: 173 ELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVR 232
Query: 103 PDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAE 161
P+ T V VL ACS G ++ R H + K+ I ++ L+ + R G I +A+
Sbjct: 233 PNEFTIVCVLSACSQLGALEIGRWVHSYM--RKFEIELNLFVGNALINMYSRCGSIDEAQ 290
Query: 162 ELIKNM 167
+ M
Sbjct: 291 TVFDEM 296
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 163/392 (41%), Positives = 236/392 (60%), Gaps = 48/392 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
E+L LFR++Q G+ ++VT+V+L+ AC++LGA+ G W+H ++++ I+++ +G A
Sbjct: 349 ESLYLFRDMQVIGIRPNEVTIVALISACSNLGAVSQGFWVHCFVLRNKIKMNRFVGTAFV 408
Query: 68 -----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
+D TA+I A+ G GN+ALE + +M+ +G+ PD
Sbjct: 409 DMYSKCGCLNLACQVFDKMPENDRDSFCYTAMIGGFAVHGYGNQALELYRKMKFKGLVPD 468
Query: 105 AITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+ TFV + ACSH GLV+E + F M E +G+ P +EHYGCL+ +LGRAGR+ +AEE +
Sbjct: 469 SATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDLLGRAGRLKEAEEWL 528
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWK 224
+MPM + + LLGA RIH NL E A +L+EL P+ G+YV+LSN Y+S +
Sbjct: 529 ADMPMKPNAVLWRSLLGAARIHGNLGVGEVALTKLIELEPETSGNYVLLSNMYASVGRVN 588
Query: 225 KVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------G 260
VKR+R+LM + K PG L+E+ G +HEF+ G
Sbjct: 589 DVKRVRKLMKHHGVNKLPGFSLVEIKGAMHEFLTGDRSHPFSKEIYLKIAEINSRLEEYG 648
Query: 261 FVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATN 320
SE LFD++EE+KE L+ H+E+LAI F L++ + IRIIKNLRVC DCH T
Sbjct: 649 HKARTSEALFDLEEEDKEGVLSYHSERLAIAFALIASPSSLAIRIIKNLRVCGDCHAFTK 708
Query: 321 IISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+IS Y+RE +V DRNRFHHFK+GSCSC D+W
Sbjct: 709 LISVAYHREIIVRDRNRFHHFKDGSCSCLDYW 740
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 170/398 (42%), Positives = 238/398 (59%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI----MKKN 56
YV+ +EA+ LF +++ G+ ++VT+V++L AC LGAL++GM +H Y K+N
Sbjct: 202 YVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRN 261
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + L M + V++ +A+I LAM G+ +AL F +M
Sbjct: 262 VRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQ 321
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++P+ +TF+G+L ACSH GL+ E F M+ YGI P IEHYGC+V +L RAG +
Sbjct: 322 VGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLH 381
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E I NMPM + V G LLGACR+H N+E AE A + LLEL P N G YV+LSN Y+
Sbjct: 382 EAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYA 441
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ +W+ R+R+ M +R +KK PG I VDGVVHEFV
Sbjct: 442 EAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLE 501
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VPN S VL D++E EK ++ H+EKLA+ FGL++ IRI+KNLR+C D
Sbjct: 502 EMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICED 561
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A +IS + NRE VV DRNRFH F + SCSC+D+W
Sbjct: 562 CHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 599
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
+A++LF ++ + D T S+L AC +L L G LH + K VG
Sbjct: 144 DAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEK------VGF----- 192
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD--ERIS 126
+ T++I CG+ +A+ F +M+ GVK + +T V VL AC+ G +D RI
Sbjct: 193 --RSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIH 250
Query: 127 HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIH 186
+ S ++G + ++ L+ + + G + +A ++ + M ++G +H
Sbjct: 251 EY---SNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEME-ERTVVSWSAMIGGLAMH 306
Query: 187 DNLEAAERAAQQLLEL-LPDNGGSYVIL 213
E A R + ++ + NG +++ L
Sbjct: 307 GRAEEALRLFSDMSQVGIEPNGVTFIGL 334
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 170/398 (42%), Positives = 238/398 (59%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI----MKKN 56
YV+ +EA+ LF +++ G+ ++VT+V++L AC LGAL++GM +H Y K+N
Sbjct: 235 YVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRN 294
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + L M + V++ +A+I LAM G+ +AL F +M
Sbjct: 295 VRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQ 354
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++P+ +TF+G+L ACSH GL+ E F M+ YGI P IEHYGC+V +L RAG +
Sbjct: 355 VGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLH 414
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E I NMPM + V G LLGACR+H N+E AE A + LLEL P N G YV+LSN Y+
Sbjct: 415 EAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYA 474
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ +W+ R+R+ M +R +KK PG I VDGVVHEFV
Sbjct: 475 EAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLE 534
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VPN S VL D++E EK ++ H+EKLA+ FGL++ IRI+KNLR+C D
Sbjct: 535 EMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICED 594
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A +IS + NRE VV DRNRFH F + SCSC+D+W
Sbjct: 595 CHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 632
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EA LLF ++ + + + + L+ H GA D+ M +
Sbjct: 181 EARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAY-----------------DLFSRMPER 223
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD--ERIS 126
+V + T++I CG+ +A+ F +M+ GVK + +T V VL AC+ G +D RI
Sbjct: 224 NVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIH 283
Query: 127 HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIH 186
+ S ++G + ++ L+ + + G + +A ++ + M ++G +H
Sbjct: 284 EY---SNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEME-ERTVVSWSAMIGGLAMH 339
Query: 187 DNLEAAERAAQQLLEL-LPDNGGSYVIL 213
E A R + ++ + NG +++ L
Sbjct: 340 GRAEEALRLFSDMSQVGIEPNGVTFIGL 367
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 164/398 (41%), Positives = 241/398 (60%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V + AL FR +Q + + ++ T+V +L AC+ LGALE+G W+H Y+ K IE++
Sbjct: 217 FVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELN 276
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL +DV+T +I L+M G+ +A+E F M
Sbjct: 277 LFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVG 336
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
R ++P +TFVGVL ACSH GLVD F+ M+ Y + P IEHYGC+V +LGR GR+
Sbjct: 337 RRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLE 396
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI+ M M DH +LG LL AC++H NLE E+ A++L + + G+YV+LS+ Y+
Sbjct: 397 EAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYA 456
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
SS KWK+ ++R M E ++K PGC IEV+ +HEF+
Sbjct: 457 SSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNR 516
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P K VL D+++ EKE AL +H+E+LAI +GL+S P +IR++KNLRVC D
Sbjct: 517 LLRLEGYHPEKEVVLQDIEDGEKEWALAMHSERLAICYGLISTEPCTMIRVMKNLRVCYD 576
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A +I+K+ R+ VV DRNRFH+F+NG+CSC D+W
Sbjct: 577 CHSAIKLIAKITRRKIVVRDRNRFHYFENGACSCGDYW 614
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 29/186 (15%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK-------------- 54
EA+ L+ + H+ + D M S+L AC AL G +H +K
Sbjct: 120 EAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIM 179
Query: 55 ------------KNIEVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVK 102
+ + ++ + KD + TA+I + N+ALE F MQ V+
Sbjct: 180 ELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVR 239
Query: 103 PDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAE 161
P+ T V VL ACS G ++ R H + K+ I ++ L+ + R G I +A+
Sbjct: 240 PNEFTIVCVLSACSQLGALEIGRWVHSYM--RKFEIELNLFVGNALINMYSRCGSIDEAQ 297
Query: 162 ELIKNM 167
+ M
Sbjct: 298 TVFDEM 303
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 173/401 (43%), Positives = 236/401 (58%), Gaps = 50/401 (12%)
Query: 1 YVEDSACEEALLLFREVQ-HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
YV EAL F ++ H + ++ +VS+L AC HLGAL+ G W+H YI K I +
Sbjct: 264 YVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILL 323
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ AL +D++T T++I L+M G G + L F EM
Sbjct: 324 SSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEML 383
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G KPD IT +GVL CSH+GLV+E +S F+ M +GI P +EHYGCL+ +LGRAGR+
Sbjct: 384 AEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRL 443
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLP-DNGGSYVILSNR 216
A E IK+MPM D LL ACRIH +++ ER + EL P +GG YV+LSN
Sbjct: 444 ESAFEAIKSMPMEPDVVAWRALLSACRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNL 503
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA----------------- 259
Y+S +W+ V ++R+ M++R + PGC IE+DGVVHEF+ A
Sbjct: 504 YASMGQWESVTKVRKAMSQRGSEGCPGCSWIEIDGVVHEFLAADKLHPRISEINKKLNEV 563
Query: 260 --------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
G+VP+ +VLFD++EE+KE A++ H+EKLA+ FGL+S G IRI KNLR
Sbjct: 564 LRRISIEGGYVPSTKQVLFDLNEEDKEQAVSWHSEKLAVAFGLLSTQEGT-IRITKNLRT 622
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH+A IS V+NRE VV DR+RFH F+ G+CSC D+W
Sbjct: 623 CEDCHSAMKTISLVFNREIVVRDRSRFHTFRYGNCSCTDYW 663
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 163/399 (40%), Positives = 239/399 (59%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQH-KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
YV+++ EAL LFREV + ++VT+++++ AC LG LE G W+H YI +
Sbjct: 256 YVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGH 315
Query: 60 DVGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
V L M+ KD+++ +++ A+ G G +AL F MQ
Sbjct: 316 SVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQ 375
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
++PD ITF+GVL ACSHAGLV E F + YG+R EHYGC+V +L RAG +
Sbjct: 376 TTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLL 435
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
A+A E I+ MP+ D + G +LGACR+++NLE E AA+ LL+L P N G Y++LSN Y
Sbjct: 436 AEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIY 495
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------- 258
+ + W +VK++RELM E+ I+K PGC + +D + H F+
Sbjct: 496 AKRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVR 555
Query: 259 -----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
AG+V + SEVL ++D+ +KE +++ H+EKLA+ +GL+ G I I+KNLRVC+
Sbjct: 556 EKLKLAGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCS 615
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHT ++SK+Y R+ + DRNRFHHFK+GSCSC+D+W
Sbjct: 616 DCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 26/192 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+++ EALLL+++++ G + D+VTM +L+ AC L L VGM LH +I + ++++
Sbjct: 155 YMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKIC 214
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ- 97
LG AL KDV +ALI + +AL+ F E+
Sbjct: 215 AVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAG 274
Query: 98 IRGVKPDAITFVGVLVACSHAG-LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
++P+ +T + V+ AC+ G L R H + + G S+ + L+ + + G
Sbjct: 275 GSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNN--SLIDMFSKCGD 332
Query: 157 IAKAEELIKNMP 168
I A+ + +M
Sbjct: 333 IDAAKRIFDSMS 344
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 167/390 (42%), Positives = 230/390 (58%), Gaps = 46/390 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +E L LF+E+Q G D+ T+VS++ AC L ALE G W+H YI + + ++
Sbjct: 483 YAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTIN 542
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG L D + T ALI+ LAM G +L+ F M+
Sbjct: 543 VILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKK 602
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V P+ ITF+GVL AC H GLVDE HF M + I+P+++HYGC+V +LGRAG++
Sbjct: 603 CHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQ 662
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AEEL+ MPM D G LLGAC+ H + E R ++L+EL PD+ G +V+LSN Y+
Sbjct: 663 EAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYA 722
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
S KW V IR +M + + K PGC +IE +GV+HEF+
Sbjct: 723 SKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAM 782
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P+ +EVL D+DEEEKE+ L H+EKLAI FGL++ P IRI+KNLR+CND
Sbjct: 783 KLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICND 842
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNG 344
CHTA +ISK + R+ VV DR+RFHHF+ G
Sbjct: 843 CHTAAKLISKAFCRKIVVRDRHRFHHFEQG 872
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 162/400 (40%), Positives = 242/400 (60%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQH--KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
Y ++ EA+ L+ ++ + G+ + V + ++LLAC H GA++ G +H +++ +E
Sbjct: 275 YAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLE 334
Query: 59 VDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+V +G ++ K++++ +A+I M G+G +ALE F EM
Sbjct: 335 ENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEM 394
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ G++P+ ITF+ VL ACSHAGL+DE +N M +++GI +EHYGC+V +LGRAG
Sbjct: 395 KRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGC 454
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A LIK M + D + G LL ACRIH N+E AE + ++L EL N G YV+LSN
Sbjct: 455 LDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNI 514
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+ +R WK V+RIR L+ R I+KPPG E+ G ++ F
Sbjct: 515 YAEARMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKL 574
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+AG+VPN VL D+DEEEKE+AL +H+EKLA+ F L++ +P +I IIKNLRVC
Sbjct: 575 LERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVC 634
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+DCHTA I+K+ RE ++ D RFHHFK+G CSC+D+W
Sbjct: 635 SDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 674
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 162/400 (40%), Positives = 242/400 (60%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQH--KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
Y ++ EA+ L+ ++ + G+ + V + ++LLAC H GA++ G +H +++ +E
Sbjct: 274 YAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLE 333
Query: 59 VDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+V +G ++ K++++ +A+I M G+G +ALE F EM
Sbjct: 334 ENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEM 393
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ G++P+ ITF+ VL ACSHAGL+DE +N M +++GI +EHYGC+V +LGRAG
Sbjct: 394 KRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGC 453
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A LIK M + D + G LL ACRIH N+E AE + ++L EL N G YV+LSN
Sbjct: 454 LDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNI 513
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+ +R WK V+RIR L+ R I+KPPG E+ G ++ F
Sbjct: 514 YAEARMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKL 573
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+AG+VPN VL D+DEEEKE+AL +H+EKLA+ F L++ +P +I IIKNLRVC
Sbjct: 574 LERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVC 633
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+DCHTA I+K+ RE ++ D RFHHFK+G CSC+D+W
Sbjct: 634 SDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 673
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 171/398 (42%), Positives = 230/398 (57%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL +F +Q +G+ + V M+S+L ACT LGAL+ G W H YI + I++
Sbjct: 215 YAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKIT 274
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V L GM K+V T ++ + LAM G G K LE F M+
Sbjct: 275 VRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQ 334
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV P+A+TFV VL CS G VDE HF+ M ++GI P +EHYGCLV + RAGR+
Sbjct: 335 DGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLE 394
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A +I+ MPM V LL A R++ NLE A++++LEL N G+YV+LSN Y+
Sbjct: 395 DAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYA 454
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
S W V +R+ M + ++K PGC ++EV+G VHEF
Sbjct: 455 DSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISR 514
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+ + + V+FD+DEEEKE AL LH+EK AI FG++S V IRI+KNLRVC D
Sbjct: 515 RLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGD 574
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH + +ISK++NRE +V DRNRFHHFK+G CSC FW
Sbjct: 575 CHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 64 GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE 123
GM +D + A+I A G+ +AL F+ MQ+ GVK + + + VL AC+ G +D+
Sbjct: 199 GMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQ 258
Query: 124 -RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
R +H + E+ I+ ++ LV + + G + KA E+ M
Sbjct: 259 GRWAHSYI--ERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGM 301
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 170/399 (42%), Positives = 229/399 (57%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL LF +++ G+ + T+VSLL AC HLGAL+ G+ LH YI IEV+
Sbjct: 364 YAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVN 423
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL KDV+ +I +A+ G +A + F EM+
Sbjct: 424 SIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKE 483
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+P+ ITFV +L ACSHAG+VDE + MS YGI P +EHYGC++ +L RAG +
Sbjct: 484 AGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLE 543
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A ELI MPM + LG LLG CRIH N E E ++L+ L P + G Y++LSN Y+
Sbjct: 544 EAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYA 603
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+++KW +++R LM I K PG +IE+ G+VH FV
Sbjct: 604 AAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHT 663
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+ + VL DM+EE+KE AL +H+EKLAI +GL+ IRI+KNLRVC
Sbjct: 664 RLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCR 723
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH +ISKVY RE +V DRNRFHHF++G CSC DFW
Sbjct: 724 DCHHVIKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 762
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 110/233 (47%), Gaps = 16/233 (6%)
Query: 56 NIEVDVGL--GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLV 113
N+E GL M +DV++ +++ A CG+ N+AL F +M+ GVKP T V +L
Sbjct: 338 NVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLS 397
Query: 114 ACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDH 173
AC+H G +D+ + H + I + LV + + G+I+ A ++ M + D
Sbjct: 398 ACAHLGALDKGL-HLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAME-SKDV 455
Query: 174 FVLGGLLGACRIHDNLEAAERAAQQLLEL-LPDNGGSYVILSNRYSSSRKWKKVKRIREL 232
++ IH N++ A++ +++ E + N ++V + + S + + +++ +
Sbjct: 456 LAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDC 515
Query: 233 MAERNIKKPP----GCILIEVDGVVHEFVKAGFVPNKSEVLFDMDEEEKETAL 281
M+ +P GC V+ +AGF+ E++ M E +AL
Sbjct: 516 MSSSYGIEPKVEHYGC-------VIDLLARAGFLEEAMELIGTMPMEPNPSAL 561
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 166/397 (41%), Positives = 232/397 (58%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----NI 57
V + + EEAL LF E++ G+ D++ + ++L AC L LE G +H +K ++
Sbjct: 44 VHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSL 103
Query: 58 EVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
VD L M ++DV+T TALIV A G+G ++L ++ +M
Sbjct: 104 SVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIAS 163
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
GVKPD ITF+G+L ACSHAGLV+ S+F M E YGI+P EHY C++ +LGR+G++ +
Sbjct: 164 GVKPDFITFIGLLFACSHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLME 223
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A+EL+ M + D V LL ACR+H N+E ERAA L EL P N YV+LSN YS+
Sbjct: 224 AKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSA 283
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
+ KW++ + R LM R + K PGC IE+ VH F+
Sbjct: 284 AGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMIL 343
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+AG+VP+ + L DMDEE KE L H+EKLA+ FGL++ PG IRI KNLR+C DC
Sbjct: 344 IKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDC 403
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
HTA +S V++R ++ D N FHHF+ G+CSC D+W
Sbjct: 404 HTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 440
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 60 DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
DV M KDV++ T+L+ G +AL F EM+I G+ PD I VL AC+
Sbjct: 23 DVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELT 82
Query: 120 LVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+++ + H N + K G+ S+ LV + + G I A ++ +M
Sbjct: 83 VLEFGKQVHANFL--KSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSM 129
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 169/398 (42%), Positives = 236/398 (59%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EA+ LF E++ GL ++VT+V++L+AC +G L +G +H + + E +
Sbjct: 220 YAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKN 279
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + L D V++ +A+I LA G+ AL F +M
Sbjct: 280 IRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMIN 339
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVKP+A+TF+G+L ACSH G+V++ +F M+ YGI P IEHYGC+V + RAG +
Sbjct: 340 TGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQ 399
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E I NMP+A + V G LLG C++H N++ AE A + L +L P N G YV+LSN Y+
Sbjct: 400 EAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYA 459
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ +W+ V R+R+LM +R +KK PG I V+GVV+ FV
Sbjct: 460 EAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQ 519
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VPN S VL DM+E++KE L H+EKLA+ FGL+ PG +IRI+KNLRVC D
Sbjct: 520 RMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCED 579
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A IIS V RE VV DRNRFH FKNGSCSC D+W
Sbjct: 580 CHAALKIISVVSTREIVVRDRNRFHCFKNGSCSCGDYW 617
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG--LVD 122
M ++V + T++I A CG+ +A++ F EM+ G+ P+ +T V VLVAC+ G ++
Sbjct: 205 MPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLG 264
Query: 123 ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
RI F S + G +I L+ + + G + A + NM
Sbjct: 265 RRIHDF---SNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNM 306
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 233/398 (58%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWL-----------H 49
Y + +EAL +F E+Q + + D MV + AC+ LGALE+G W +
Sbjct: 279 YASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSN 338
Query: 50 PYIMKKNIEV-----------DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
P + I+ +V GM KD + A+I LAMCG A F +M
Sbjct: 339 PVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVK 398
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD TFVG+L C+HAGLVD+ +F+ MS + + P+IEHYGC+V + RAG +
Sbjct: 399 VGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLV 458
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A++LI++MPM + V G LLG CR+H + + AE +QL+EL P N G YV+LSN YS
Sbjct: 459 EAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYS 518
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+S +W + ++IR + ++ ++K PGC +EVDGVVHEF+
Sbjct: 519 ASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFK 578
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+ P VLFD++EEEKE L H+EKLA+ F L+S +IR++KNLRVC D
Sbjct: 579 DLREAGYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAFALISTGAKDVIRVVKNLRVCGD 638
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ++SKV RE +V D NRFHHF GSCSC+D+W
Sbjct: 639 CHEAIKLVSKVTGREIIVRDNNRFHHFTEGSCSCRDYW 676
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 25/190 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----N 56
Y+E EAL LFR + GL D T+V +L AC+ +G L G W+ Y+ + N
Sbjct: 178 YIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGN 237
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ V L GM KDV+ +ALI A G +AL+ F+EMQ
Sbjct: 238 VFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQR 297
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLM-SEKYGIRPSIEHYGCLVYILGRAGRI 157
V+PD VGV ACS G ++ LM +++ P + L+ + G +
Sbjct: 298 ENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGT--ALIDFYAKCGSV 355
Query: 158 AKAEELIKNM 167
A+A+E+ K M
Sbjct: 356 AQAKEVFKGM 365
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 23/141 (16%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLG-ALEVGMWLHPYIMKKNIEVD 60
V + A +A+ ++ ++ G D T +L ACT L VG+ LH ++K + D
Sbjct: 77 VSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWD 136
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + L K+V++ TA+I G +AL F +
Sbjct: 137 VFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLE 196
Query: 99 RGVKPDAITFVGVLVACSHAG 119
G++PD+ T V +L ACS G
Sbjct: 197 MGLRPDSFTLVRILYACSRVG 217
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 169/391 (43%), Positives = 227/391 (58%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LF +++ G+ + T+VSLL AC HLGAL+ G+ LH YI IEV+ +G AL
Sbjct: 281 EALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALV 340
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
KDV+ +I +A+ G +A + F EM+ GV+P+ I
Sbjct: 341 DMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDI 400
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFV +L ACSHAG+VDE + MS YGI P +EHYGC++ +L RAG + +A ELI
Sbjct: 401 TFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGT 460
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MPM + LG LLG CRIH N E E ++L+ L P + G Y++LSN Y++++KW
Sbjct: 461 MPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDA 520
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFVKA-------------------------GF 261
+++R LM I K PG +IE+ G+VH FV G+
Sbjct: 521 RKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGY 580
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
+ VL DM+EE+KE AL +H+EKLAI +GL+ IRI+KNLRVC DCH +
Sbjct: 581 SADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKL 640
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISKVY RE +V DRNRFHHF++G CSC DFW
Sbjct: 641 ISKVYGREIIVRDRNRFHHFEDGECSCLDFW 671
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 105/222 (47%), Gaps = 14/222 (6%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
M +DV++ +I A+CG+ N+AL F +M+ GVKP T V +L AC+H G +D+
Sbjct: 258 MVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKG 317
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACR 184
+ H + I + LV + + G+I+ A ++ M + D ++
Sbjct: 318 L-HLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAME-SKDVLAWNTIIAGMA 375
Query: 185 IHDNLEAAERAAQQLLEL-LPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPP- 242
IH N++ A++ +++ E + N ++V + + S + + +++ + M+ +P
Sbjct: 376 IHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKV 435
Query: 243 ---GCILIEVDGVVHEFVKAGFVPNKSEVLFDMDEEEKETAL 281
GC V+ +AGF+ E++ M E +AL
Sbjct: 436 EHYGC-------VIDLLARAGFLEEAMELIGTMPMEPNPSAL 470
>gi|296085273|emb|CBI29005.3| unnamed protein product [Vitis vinifera]
Length = 587
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 171/399 (42%), Positives = 229/399 (57%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL LF +++ G+ + T+VSLL AC HLGAL+ G+ LH YI IEV+
Sbjct: 189 YAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVN 248
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL KDV+ +I +A+ G +A F EM+
Sbjct: 249 SIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQRLFKEMKE 308
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+P+ ITFV +L ACSHAG+VDE + MS YGI P +EHYGC++ +L RAG +
Sbjct: 309 AGVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGLLE 368
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A ELI MPM + LG LLG CRIH N E E ++L+ L P + G Y++LSN Y+
Sbjct: 369 EAMELIGTMPMEPNPCALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYA 428
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+++KW +++R LM I K PG +IE+ G+VH FV
Sbjct: 429 AAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHT 488
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G + +VL DM+EE+KE AL +H+EKLAI +GL+ IRI+KNLRVC
Sbjct: 489 RLKSAIGHSADTGDVLLDMEEEDKEHALPVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCR 548
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH T +ISKVY RE +V DRNRFHHF++G CSC DFW
Sbjct: 549 DCHHVTKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 587
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 70/137 (51%), Gaps = 2/137 (1%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
M +DV++ +++ A CG+ N+AL F +M+ GVKP T V +L AC+H G +D+
Sbjct: 174 MPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKG 233
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACR 184
+ H + I + LV + + G+I+ A ++ M + D ++
Sbjct: 234 L-HLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAME-SKDVLAWNTIIAGMA 291
Query: 185 IHDNLEAAERAAQQLLE 201
IH +++ A+R +++ E
Sbjct: 292 IHGHVKEAQRLFKEMKE 308
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 234/398 (58%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +E+L +F +++ G+ D+ M S+L AC L ALE+G H Y+++ +D
Sbjct: 117 YAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALD 176
Query: 61 VGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL D+ ++ ++I A G+GN A+ F +M
Sbjct: 177 IVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQ 236
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KP+ I+FVGVL ACSH GLV+E +FNLM++ YGI P + HY C++ +LGRAG +
Sbjct: 237 AGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLD 296
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE I MP+ D V G LLGACRIH N E A+R A+ LL + G YV+LSN Y+
Sbjct: 297 EAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYA 356
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ +W ++R+LM +R + K PG IEV ++H FV
Sbjct: 357 AAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSR 416
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VPNK+ VL D++++EKE +L+ H+EKLAI FG+++ PG IR+ KNLRVC D
Sbjct: 417 KMKAAGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGD 476
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHT IS + R+ VV D NRFHHFK+G CSC D+W
Sbjct: 477 CHTVIKFISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 27/142 (19%)
Query: 20 KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL------------ 67
KG+ ++ T+ +++ AC + +LE G H YI+K E DV + AL
Sbjct: 4 KGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLED 63
Query: 68 ----------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSH 117
+ T A+I A KAL+ FYEM R D +++ V+ +
Sbjct: 64 AGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSER----DVVSWTAVIAGYAQ 119
Query: 118 AGLVDERISHFNLMSEKYGIRP 139
G DE ++ FN M K G++
Sbjct: 120 NGYGDESLNVFNQM-RKTGMKS 140
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 2/137 (1%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
M+ +DV++ TA+I A G G+++L F +M+ G+K D VL AC+ + E
Sbjct: 102 MSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAAL-EL 160
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACR 184
F+ + G I LV + ++G + A ++ MP + ++ C
Sbjct: 161 GRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQR-NEVSWNSIITGCA 219
Query: 185 IHDNLEAAERAAQQLLE 201
H A +Q+L+
Sbjct: 220 QHGRGNDAVLLFEQMLQ 236
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 317 bits (812), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 171/398 (42%), Positives = 231/398 (58%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V+ + A F+ +Q G+ DK+T LL AC AL G LH I + + D
Sbjct: 590 FVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCD 649
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G L K+V + T++I A G+G +ALE FY+MQ
Sbjct: 650 VLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQ 709
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVKPD ITFVG L AC+HAGL++E + HF M E + I P +EHYGC+V + GRAG +
Sbjct: 710 EGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLN 768
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E I M + D V G LLGAC++H N+E AE+AAQ+ LEL P++ G +VILSN Y+
Sbjct: 769 EAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYA 828
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ WK+V ++R++M +R + K PG IEVDG VH F
Sbjct: 829 AAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHM 888
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G+VP+ VL D+++ EKE AL H+E+LAIT+GL+ P I I KNLRVC D
Sbjct: 889 EMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGD 948
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTAT ISK+ R+ + D NRFHHFK+G CSC DFW
Sbjct: 949 CHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ + AL F+ + +G+ + T S+L C +LE+G W+H IMK +E D
Sbjct: 489 YVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESD 548
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL +D+++ +I G+ A +YF MQ
Sbjct: 549 LHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQE 608
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD ITF G+L AC+ + E L++E + G L+ + + G I
Sbjct: 609 SGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTG-LISMYTKCGSIE 667
Query: 159 KAEELIKNMP 168
A ++ +P
Sbjct: 668 DAHQVFHKLP 677
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 22/145 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ EEA L ++ + DK T VS+L AC ++ G L+ I+K + D
Sbjct: 186 YVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTD 245
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL +D++T T++I LA G+ +A F M+
Sbjct: 246 LFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEE 305
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE 123
GV+PD + FV +L AC+H +++
Sbjct: 306 EGVQPDKVAFVSLLRACNHPEALEQ 330
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 69/131 (52%), Gaps = 22/131 (16%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
++A LF+ ++ +G+ DKV VSLL AC H ALE G +H + + + ++ +G A+
Sbjct: 294 KQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAI 353
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
++V++ TA+I A G+ ++A +F +M G++P+
Sbjct: 354 LSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNR 413
Query: 106 ITFVGVLVACS 116
+TF+ +L ACS
Sbjct: 414 VTFMSILGACS 424
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 25/191 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + +EA L F ++ G+ ++VT +S+L AC+ AL+ G + +I++ D
Sbjct: 388 FAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSD 447
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL ++V+ A+I Q + AL F +
Sbjct: 448 DRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLK 507
Query: 99 RGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G+KP++ TF +L C + ++ + HF +M K G+ + LV + G +
Sbjct: 508 EGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIM--KAGLESDLHVSNALVSMFVNCGDL 565
Query: 158 AKAEELIKNMP 168
A+ L +MP
Sbjct: 566 MSAKNLFNDMP 576
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 23/182 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EA+ + V + + T +LL C L G ++ +I K ++ D+ + L
Sbjct: 93 EAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLI 152
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
KDV + L+ G +A + +M VKPD
Sbjct: 153 NMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKR 212
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFV +L AC+ A VD+ +NL+ K G + L+ + + G I A ++ N
Sbjct: 213 TFVSMLNACADARNVDKGRELYNLIL-KAGWDTDLFVGTALINMHIKCGDIGDATKVFDN 271
Query: 167 MP 168
+P
Sbjct: 272 LP 273
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 171/398 (42%), Positives = 231/398 (58%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V+ + A F+ +Q G+ DK+T LL AC AL G LH I + + D
Sbjct: 590 FVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCD 649
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G L K+V + T++I A G+G +ALE FY+MQ
Sbjct: 650 VLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQ 709
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVKPD ITFVG L AC+HAGL++E + HF M E + I P +EHYGC+V + GRAG +
Sbjct: 710 EGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLN 768
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E I M + D V G LLGAC++H N+E AE+AAQ+ LEL P++ G +VILSN Y+
Sbjct: 769 EAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYA 828
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ WK+V ++R++M +R + K PG IEVDG VH F
Sbjct: 829 AAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHM 888
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G+VP+ VL D+++ EKE AL H+E+LAIT+GL+ P I I KNLRVC D
Sbjct: 889 EMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGD 948
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTAT ISK+ R+ + D NRFHHFK+G CSC DFW
Sbjct: 949 CHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ + AL F+ + +G+ + T S+L C +LE+G W+H IMK +E D
Sbjct: 489 YVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESD 548
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL +D+++ +I G+ A +YF MQ
Sbjct: 549 LHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQE 608
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD ITF G+L AC+ + E L++E + G L+ + + G I
Sbjct: 609 SGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTG-LISMYTKCGSIE 667
Query: 159 KAEELIKNMP 168
A ++ +P
Sbjct: 668 DAHQVFHKLP 677
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 22/145 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ EEA L ++ + DK T VS+L AC ++ G L+ I+K + D
Sbjct: 186 YVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTD 245
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL +D++T T++I LA G+ +A F M+
Sbjct: 246 LFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEE 305
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE 123
GV+PD + FV +L AC+H +++
Sbjct: 306 EGVQPDKVAFVSLLRACNHPEALEQ 330
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 69/131 (52%), Gaps = 22/131 (16%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
++A LF+ ++ +G+ DKV VSLL AC H ALE G +H + + + ++ +G A+
Sbjct: 294 KQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAI 353
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
++V++ TA+I A G+ ++A +F +M G++P+
Sbjct: 354 LSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNR 413
Query: 106 ITFVGVLVACS 116
+TF+ +L ACS
Sbjct: 414 VTFMSILGACS 424
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 25/191 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + +EA L F ++ G+ ++VT +S+L AC+ AL+ G + +I++ D
Sbjct: 388 FAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSD 447
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL ++V+ A+I Q + AL F +
Sbjct: 448 DRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLK 507
Query: 99 RGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G+KP++ TF +L C + ++ + HF +M K G+ + LV + G +
Sbjct: 508 EGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIM--KAGLESDLHVSNALVSMFVNCGDL 565
Query: 158 AKAEELIKNMP 168
A+ L +MP
Sbjct: 566 MSAKNLFNDMP 576
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 23/182 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL----- 63
EA+ + V + + T +LL C L G ++ +I K ++ D+ +
Sbjct: 93 EAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLI 152
Query: 64 -----------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
M KDV + L+ G +A + +M VKPD
Sbjct: 153 NMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKR 212
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFV +L AC+ A VD+ +NL+ K G + L+ + + G I A ++ N
Sbjct: 213 TFVSMLNACADARNVDKGRELYNLIL-KAGWDTDLFVGTALINMHIKCGDIGDATKVFDN 271
Query: 167 MP 168
+P
Sbjct: 272 LP 273
>gi|297735590|emb|CBI18084.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 317 bits (811), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 171/409 (41%), Positives = 238/409 (58%), Gaps = 58/409 (14%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGM---------WLHPYI 52
V + ++A+ + ++ +G + T +L AC L L++G+ W+H I
Sbjct: 88 VSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKEWIHKCI 147
Query: 53 MK----KNIEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKAL 90
M+ +N+ V L GM KD+++ A+I A+ G +A+
Sbjct: 148 MEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAI 207
Query: 91 EYFYEMQIR---GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCL 147
+ F +MQ G+KPD TF+G+L C+HAGLVDE +FN M + + PSIEHYGC+
Sbjct: 208 DLFLQMQRENKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCM 267
Query: 148 VYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNG 207
V +LGRAG + +A +LI+NMPM + V G LLGACRIH + + AE A +QL+EL P N
Sbjct: 268 VDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNS 327
Query: 208 GSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------- 257
G+YV+LSN YS++ KW + ++R M E+ I+KPPGC IEVDG+VHEF+
Sbjct: 328 GNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSE 387
Query: 258 --------------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLI 303
AG+VP VLFD++EEEKE L H+EKLAI FGL+S P +I
Sbjct: 388 KIYAKLDELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVI 447
Query: 304 RIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
R++KNLRVC DCH A +IS + RE V D NRFH F+ GSCSC D+W
Sbjct: 448 RVVKNLRVCGDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 496
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 169/400 (42%), Positives = 240/400 (60%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQ-HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ +EAL +F E+Q K D+VT+VS L AC LGA+++G W+H YI ++ I +
Sbjct: 334 YEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVL 393
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ L +L +DV +A+I L M G+G A++ F+EMQ
Sbjct: 394 NCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQ 453
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
VKP+++TF VL ACSHAGLVDE F+ M YG+ P ++HY C+V ILGRAG +
Sbjct: 454 EAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFL 513
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A ELI M V G LLGAC +H N+E E A+ QLL+L P N G+ V+LSN Y
Sbjct: 514 EEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIY 573
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ + +W+KV +R+LM + +KK PGC IE +G VHEF+
Sbjct: 574 AKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIA 633
Query: 258 ----KAGFVPNKSEVLFDMDEEE-KETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
G+ PNKS +L ++E++ KE AL+LH+EKLAI FGLV+ P IR++KNLR+C
Sbjct: 634 TKLKSVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGLVTLAPSQPIRVVKNLRIC 693
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH ++S+VY+R+ ++ DR RFHHF++G CSC D+W
Sbjct: 694 GDCHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 98/246 (39%), Gaps = 56/246 (22%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + + E+AL LF +++ + + + VTMV +L AC LE G W+ YI +K I+VD
Sbjct: 202 FAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVD 261
Query: 61 VGL-----------------------------------------------------GMAL 67
+ L M +
Sbjct: 262 LTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPV 321
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV-KPDAITFVGVLVACSHAGLVDERIS 126
K++ LI G+ +AL F E+Q+ + KPD +T V L AC+ G +D
Sbjct: 322 KEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLG-G 380
Query: 127 HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIH 186
++ ++ GI + LV + + G + KA E+ ++ D +V ++ +H
Sbjct: 381 WIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVE-ERDVYVWSAMIAGLGMH 439
Query: 187 DNLEAA 192
+AA
Sbjct: 440 GRGKAA 445
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 112/271 (41%), Gaps = 45/271 (16%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL--------------------- 63
+K T ++ A + L A VG +H +K + +D+ +
Sbjct: 125 NKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLF 184
Query: 64 -GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
G++ KDV++ ++I A ALE F +M+ V P+++T VGVL AC A +D
Sbjct: 185 KGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSAC--AKKLD 242
Query: 123 ERISHFNLMS-EKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLL- 180
+ E+ GI+ + ++ + + G + A++L MP D F +L
Sbjct: 243 LEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMP-ERDVFSWTIMLD 301
Query: 181 GACRIHDNLEAAERAAQQLLELLP-DNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIK 239
G ++ D AA+ + +P ++ +L + Y + K K+ I + I
Sbjct: 302 GYAKMGDY-----DAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIA 356
Query: 240 KPPGCIL------------IEVDGVVHEFVK 258
KP L I++ G +H ++K
Sbjct: 357 KPDEVTLVSTLSACAQLGAIDLGGWIHVYIK 387
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 167/402 (41%), Positives = 234/402 (58%), Gaps = 50/402 (12%)
Query: 1 YVEDSACEEALLLFREVQHKG--LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
Y ++ E+AL LF E+ G + + VT+VS+L AC ALE G +H + +
Sbjct: 288 YTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLH 347
Query: 59 VDVGLGMAL------------------------KDVMTLTALIVVLAMCGQGNKALEYFY 94
++ + AL K+++ +I A G G +A+ F
Sbjct: 348 LNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFE 407
Query: 95 EMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRA 154
M GV+PDA+TF+G+L CSH+GL+D ++HFN M + + P +EHY C+V +LGRA
Sbjct: 408 NMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRA 467
Query: 155 GRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILS 214
GR+ +A+ELI MPM V G LL ACR H NLE AE AA++L L PDN G+YV+LS
Sbjct: 468 GRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLS 527
Query: 215 NRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK---------------- 258
N Y+ + W++VK++R L+ + +KK PGC IE++G H F+
Sbjct: 528 NLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLE 587
Query: 259 --------AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLR 310
AG++P+ S VL D+ EEEKE L H+EKLAI FGL++ PGV++R+ KNLR
Sbjct: 588 ALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLR 647
Query: 311 VCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+C DCH AT ISK+Y RE +V D NRFH FK+GSCSC D+W
Sbjct: 648 ICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 689
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 164/398 (41%), Positives = 233/398 (58%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E E+ +LF +++ G DKV MV+++ AC LGA+ +H Y+ + +D
Sbjct: 177 YAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLD 236
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG A+ K+V++ +A+I GQG +ALE F+ M
Sbjct: 237 VELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLN 296
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ P+ ITF+ +L ACSHAGLVD+ + F+LMS YG+RP ++HY C+V +LGRAGR+
Sbjct: 297 SGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLD 356
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A LI+NM + D + LGACRIH ++ AE+AA+ LL L N G Y++LSN Y+
Sbjct: 357 QALRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYA 416
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
++ +WK V +IR LMA+R +KK PG IEVD +++ F
Sbjct: 417 NAGRWKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQ 476
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VP+ + VL D+DEE K L+ H+EKLAI FGL++ G IRI KNLRVC D
Sbjct: 477 KLESAGYVPDTNSVLHDVDEEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGD 536
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+ ++S + R+ +V D NRFHHFK G CSC D+W
Sbjct: 537 CHSFCKLVSAITQRDIIVRDANRFHHFKEGICSCGDYW 574
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 104/241 (43%), Gaps = 34/241 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V++ E FRE+ G D ++ ++ AC L +G +H ++K + +D
Sbjct: 76 FVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLD 135
Query: 61 -------------VGL---------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
G+ M KD++T T +I A CG+ N++ F +M+
Sbjct: 136 NFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRR 195
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G PD + V ++ AC+ G +++ R+ H + + +Y + +E ++ + + G I
Sbjct: 196 DGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSL--DVELGTAMIDMYAKCGSI 253
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+ E+ M + ++GA H R A +L ++ ++G I+ NR
Sbjct: 254 DSSREIFDRMEQK-NVISWSAMIGAYGYH----GQGREALELFHMMLNSG----IIPNRI 304
Query: 218 S 218
+
Sbjct: 305 T 305
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/400 (40%), Positives = 241/400 (60%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQH--KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
Y ++ EA+ L+ ++ + G+ + V + ++LLAC H GA++ G +H +++ +E
Sbjct: 129 YAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQVVRMGLE 188
Query: 59 VDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+V +G ++ K++++ +A+I M G+G +ALE F EM
Sbjct: 189 ENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEM 248
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ G++P+ ITF+ VL ACSHAGL+DE +N M +++GI +EHYGC+V +LGRAG
Sbjct: 249 KRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGC 308
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A LIK M + D + G LL ACRIH N+E AE + ++L EL N G YV+LSN
Sbjct: 309 LDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNI 368
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+ + WK V+RIR L+ R I+KPPG E+ G ++ F
Sbjct: 369 YAEAGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKL 428
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+AG+VPN VL D+DEEEKE+AL +H+EKLA+ F L++ +P +I IIKNLRVC
Sbjct: 429 LERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVC 488
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+DCHTA I+K+ RE ++ D RFHHFK+G CSC+D+W
Sbjct: 489 SDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 528
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/398 (41%), Positives = 231/398 (58%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EAL LF +Q +GL DKVT +++L AC + G+LE +H + K D
Sbjct: 505 YAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSD 564
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL ++V++ A+I A G+G AL+ F M++
Sbjct: 565 TSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKM 624
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVKPD +TFV +L ACSHAGL++E +F MS+ + I P+IEHYGC+V +LGRAG++
Sbjct: 625 EGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLD 684
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE LIK MP + + G LLGACRIH N+ AERAA+ L+L DN YV LS+ Y+
Sbjct: 685 EAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYA 744
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
++ W ++R+LM +R + K PG I+V +H FV
Sbjct: 745 AAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTH 804
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VP+ V+ D+DE EKE A+ H+E+LAI +GL+S PG I I KNLRVC D
Sbjct: 805 AMKMKGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTRIHIFKNLRVCPD 864
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTAT ISK+ +RE + D NRFHHFK+G CSC D+W
Sbjct: 865 CHTATKFISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 115/257 (44%), Gaps = 29/257 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
E EEA ++ ++Q +G+ +K+T V LL AC + AL G +H + K D+
Sbjct: 304 AEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDI 363
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
G+ AL KDV++ TA+I LA G G +AL + EMQ
Sbjct: 364 GVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQA 423
Query: 100 GVKPDAITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+P+ +T+ +L ACS A L R H ++ + G+ LV + G +
Sbjct: 424 GVEPNRVTYTSILNACSSPAALEWGRRIHQQVV--EAGLATDAHVGNTLVNMYSMCGSVK 481
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE--LLPDNGGSYVILSNR 216
A ++ M + D ++G H+ + A + +L E L PD +Y+ + N
Sbjct: 482 DARQVFDRM-IQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDK-VTYINMLNA 539
Query: 217 YSSSRKWKKVKRIRELM 233
++S + + I L+
Sbjct: 540 CANSGSLEWAREIHTLV 556
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 22/138 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y++ E+AL L R++Q GL D+ T++S L +C GALE G +H M+ + D
Sbjct: 101 YIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFD 160
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + M K V++ T I A CG+ A E F +M+
Sbjct: 161 VKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQ 220
Query: 99 RGVKPDAITFVGVLVACS 116
GV P+ IT++ VL A S
Sbjct: 221 EGVVPNRITYISVLNAFS 238
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 11/188 (5%)
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD-ERIS 126
+ V + A++V G KAL+ +MQ G+ PD T + L +C G ++ R
Sbjct: 89 RTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREI 148
Query: 127 HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM---PMALDHFVLGGLLGAC 183
HF M + G+ ++ C++ + + G I +A E+ M + +GG
Sbjct: 149 HFQAM--QAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCG 206
Query: 184 RIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS--SRKWKKVKRIRELMAERNIKKP 241
R E ++ Q E + N +Y+ + N +SS + KW K R L A
Sbjct: 207 RSETAFEIFQKMEQ---EGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTA 263
Query: 242 PGCILIEV 249
G L+++
Sbjct: 264 VGTALVKM 271
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/399 (40%), Positives = 238/399 (59%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLF-REVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ E++ +F R V+ + + VT+ ++LLAC H G+ +G +H ++K +E
Sbjct: 183 YAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLES 242
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+V +G ++ K+V + +A++ M G +ALE FYEM
Sbjct: 243 NVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMN 302
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+ GVKP+ ITFV VL ACSHAGL++E F MS ++ + P +EHYGC+V +LGRAG +
Sbjct: 303 MAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYL 362
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A +LIK M + D V G LLGACR+H N++ E +A++L EL P N G YV+LSN Y
Sbjct: 363 KEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIY 422
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ + +W+ V+R+R LM + KPPG L+++ G VH F+
Sbjct: 423 ADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLS 482
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ G+VP+ + VL D+ EEKE L +H+EKLA+ FG+++ +PG I IIKNLRVC
Sbjct: 483 MKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCG 542
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTA ISK+ +RE VV D RFHHF++G CSC D+W
Sbjct: 543 DCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 581
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 64 GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG-VKPDAITFVGVLVACSHAG 119
GMA +DV++ ++I V A G +++E F+ M G + +A+T VL+AC+H+G
Sbjct: 167 GMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSG 223
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/399 (40%), Positives = 238/399 (59%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLF-REVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ E++ +F R V+ + + VT+ ++LLAC H G+ +G +H ++K +E
Sbjct: 337 YAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLES 396
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+V +G ++ K+V + +A++ M G +ALE FYEM
Sbjct: 397 NVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMN 456
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+ GVKP+ ITFV VL ACSHAGL++E F MS ++ + P +EHYGC+V +LGRAG +
Sbjct: 457 MAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYL 516
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A +LIK M + D V G LLGACR+H N++ E +A++L EL P N G YV+LSN Y
Sbjct: 517 KEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIY 576
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ + +W+ V+R+R LM + KPPG L+++ G VH F+
Sbjct: 577 ADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLS 636
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ G+VP+ + VL D+ EEKE L +H+EKLA+ FG+++ +PG I IIKNLRVC
Sbjct: 637 MKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCG 696
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTA ISK+ +RE VV D RFHHF++G CSC D+W
Sbjct: 697 DCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 31/150 (20%)
Query: 1 YVEDSACEEALLLFRE--VQHKGLTGD------KVTMVSLLLACTHLGALEVGMWLHPYI 52
YV++ ALLLF+E V+ G GD + MVS+L AC+ + + +H ++
Sbjct: 228 YVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFL 287
Query: 53 MKKNIEVDVGL----------------------GMALKDVMTLTALIVVLAMCGQGNKAL 90
+K+ E D+G+ GMA +DV++ ++I V A G +++
Sbjct: 288 IKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESM 347
Query: 91 EYFYEMQIRG-VKPDAITFVGVLVACSHAG 119
E F+ M G + +A+T VL+AC+H+G
Sbjct: 348 EIFHRMVKDGEINYNAVTLSAVLLACAHSG 377
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/395 (42%), Positives = 239/395 (60%), Gaps = 46/395 (11%)
Query: 4 DSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL 63
D EAL LF +Q G+ D V +VS L AC LG L+ G W+H YI K IE+D L
Sbjct: 180 DQRDTEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPIL 239
Query: 64 GMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV 101
G L K V TA+I A+ G+G +ALE+F +MQ GV
Sbjct: 240 GCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGV 299
Query: 102 KPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAE 161
+P+ +TF G+L ACSHAGLV E F M +G +PSIEHYGC+V +LGRAG + +AE
Sbjct: 300 EPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAE 359
Query: 162 ELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSR 221
ELI+NMP+ + + G LL AC IH NLE ++ + L+++ P +GG Y+ L++ ++++
Sbjct: 360 ELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAG 419
Query: 222 KWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------ 257
+W + R+R M E+ + K PGC +I V+G HEF+
Sbjct: 420 EWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLR 479
Query: 258 KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHT 317
+ G+ P ++L D++++EKETA++ H+EKLA+TFGL+S PG+ IRI+KNLRVC DCHT
Sbjct: 480 EEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHT 539
Query: 318 ATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ISKVY RE ++ DR RFH FK+G+C+C D+W
Sbjct: 540 VIKLISKVYAREILMRDRTRFHLFKDGNCTCGDYW 574
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 10/174 (5%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y EEALLL+ + + + + T LL AC+ + ALE +H +I+K +
Sbjct: 93 YSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSE 152
Query: 61 VGLGMALKDVMT-----LTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC 115
+ +L +V + +A ++ + + +AL F+ MQ G+K D + V L AC
Sbjct: 153 IYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTEALNLFHRMQTAGIKLDNVALVSTLQAC 212
Query: 116 SHAGLVDE-RISHFNLMSEKYGIRPSIEHYGC-LVYILGRAGRIAKAEELIKNM 167
+ G++D+ + H + + I P + GC L+ + + G + +A E+ + M
Sbjct: 213 ADLGVLDQGKWIHAYIKKHEIEIDPIL---GCVLIDMYAKCGDLEEAIEVFRKM 263
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 164/397 (41%), Positives = 235/397 (59%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V + AL +FR +Q + + ++VT+V +L AC+ LGAL++G W+ Y+ K IE++
Sbjct: 225 VRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIELNH 284
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+G AL K+V+T ++I+ A+ G+ +A+E F + +
Sbjct: 285 FVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLIKQ 344
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G P ++TFVGVL ACSH GL + F+ M++ YGI P IEHYGC+V +LGR GR+ +
Sbjct: 345 GFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEE 404
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A I+ M +A DH +LG LL AC+IH NLE AER A+ L+ + G+Y++LSN YSS
Sbjct: 405 AYSFIRMMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSGTYILLSNAYSS 464
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA-------------------- 259
S KWK+ +R M E I+K PGC IEV+ +HEF+
Sbjct: 465 SGKWKEAAEVRTNMREEGIEKEPGCSSIEVNNEIHEFLLGDLRHPQKEKIYKKLEELNQI 524
Query: 260 ----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
G+ P VL D+++ EKE AL +H+E+LAI +GL+S P +R++KNLRVCNDC
Sbjct: 525 LRLEGYTPATEVVLHDIEKSEKEWALAIHSERLAICYGLISTKPLTTLRVVKNLRVCNDC 584
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H +IS + R+ VV DRNRFHHF+NG CSC D+W
Sbjct: 585 HLTIKLISNITRRKIVVRDRNRFHHFENGVCSCGDYW 621
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 14/173 (8%)
Query: 6 ACEEALLLFREVQHK----GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI---- 57
C AL REV + GL+ ++ + L+ GA E + + ++++
Sbjct: 141 GCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVAST 200
Query: 58 -EVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACS 116
++ +KD + TA+I L G+ N+ALE F MQ V P+ +T V VL ACS
Sbjct: 201 VMINYYFDHGIKDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACS 260
Query: 117 HAGLVDERISHFNLMSEKYGIRPSIEHY--GCLVYILGRAGRIAKAEELIKNM 167
G + + M + R + H+ G L+ + R G I +A+ + + M
Sbjct: 261 ELGALQLGRWVRSYMDKH---RIELNHFVGGALINMYSRCGDIDEAQRVFEQM 310
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/370 (43%), Positives = 221/370 (59%), Gaps = 46/370 (12%)
Query: 29 MVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL--------------------- 67
M +L AC + ALE G +H I+K E+DV + L
Sbjct: 1 MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60
Query: 68 -KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERIS 126
DV + A+I LA G G +A+ F +M GVKP+ ITFV VL CSHAGLVDE +
Sbjct: 61 EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRN 120
Query: 127 HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIH 186
+F+ M+ +GI P EHY C+V + GRAG + +A I MP+ + V G LLGACR+H
Sbjct: 121 YFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVH 180
Query: 187 DNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCIL 246
N+E AERA +QL+EL P+N G+YV+LSN Y+++ +W ++R++M +R++KK PGC
Sbjct: 181 GNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSW 240
Query: 247 IEVDGVVHEFV------------------------KAGFVPNKSEVLFDMDEEEKETALN 282
IEV VH F+ AG++PN + VL D++EE+KE L
Sbjct: 241 IEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILG 300
Query: 283 LHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFK 342
H+EKLAI FG++S PG IR++KNLRVC DCHTAT IS++ +RE V+ D +RFHHFK
Sbjct: 301 HHSEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHFK 360
Query: 343 NGSCSCKDFW 352
+G CSC D+W
Sbjct: 361 DGQCSCGDYW 370
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/399 (41%), Positives = 231/399 (57%), Gaps = 48/399 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ + A+ LF+E+ + L+ + VT+ S+L AC LGAL +G W+H I + +E +
Sbjct: 391 YTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESN 449
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL K+V+T A+I + G G +AL+ FYEM
Sbjct: 450 VYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQ 509
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ P +TF+ +L ACSH+GLV E F+ M+ YG +P EHY C+V ILGRAG++
Sbjct: 510 SGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLT 569
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A E I+ MP+ V G LLGAC IH N E A A+++L +L P+N G YV+LSN YS
Sbjct: 570 NALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYS 629
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ R + K +R+++ +R + K PGC LIE+D + F
Sbjct: 630 TDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTG 689
Query: 258 ---KAGF-VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+AG+ + L D+++EEKE +N+H+EKLAI FGL+S PG IRIIKNLRVC
Sbjct: 690 KMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCL 749
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTAT ISK+ R VV D NRFHHFKNG CSC D+W
Sbjct: 750 DCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 13/108 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ +S E+++ +F ++ GL+ D T+ ++L A L +GM + KK +
Sbjct: 189 FSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLH-- 246
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITF 108
DV LT LI + + CG+ K F ++ +PD I++
Sbjct: 247 -------SDVYVLTGLISLYSKCGKSCKGRILFDQID----QPDLISY 283
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/402 (41%), Positives = 234/402 (58%), Gaps = 50/402 (12%)
Query: 1 YVEDSACEEALLLFREVQHKG--LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
Y ++ E+AL LF E+ G + + VT+VS+L AC ALE G +H + +
Sbjct: 214 YTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLH 273
Query: 59 VDVGLGMAL------------------------KDVMTLTALIVVLAMCGQGNKALEYFY 94
++ + AL K+++ +I A G G +A+ F
Sbjct: 274 LNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFE 333
Query: 95 EMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRA 154
M GV+PDA+TF+G+L CSH+GL+D ++HFN M + + P +EHY C+V +LGRA
Sbjct: 334 NMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRA 393
Query: 155 GRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILS 214
GR+ +A+ELI MPM V G LL ACR H NLE AE AA++L L PDN G+YV+LS
Sbjct: 394 GRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLS 453
Query: 215 NRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK---------------- 258
N Y+ + W++VK++R L+ + +KK PGC IE++G H F+
Sbjct: 454 NLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLE 513
Query: 259 --------AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLR 310
AG++P+ S VL D+ EEEKE L H+EKLAI FGL++ PGV++R+ KNLR
Sbjct: 514 ALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLR 573
Query: 311 VCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+C DCH AT ISK+Y RE +V D NRFH FK+GSCSC D+W
Sbjct: 574 ICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 615
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/399 (41%), Positives = 231/399 (57%), Gaps = 48/399 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ + A+ LF+E+ + L+ + VT+ S+L AC LGAL +G W+H I + +E +
Sbjct: 391 YTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESN 449
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL K+V+T A+I + G G +AL+ FYEM
Sbjct: 450 VYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQ 509
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ P +TF+ +L ACSH+GLV E F+ M+ YG +P EHY C+V ILGRAG++
Sbjct: 510 SGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLT 569
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A E I+ MP+ V G LLGAC IH N E A A+++L +L P+N G YV+LSN YS
Sbjct: 570 NALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYS 629
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ R + K +R+++ +R + K PGC LIE+D + F
Sbjct: 630 TDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTG 689
Query: 258 ---KAGF-VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+AG+ + L D+++EEKE +N+H+EKLAI FGL+S PG IRIIKNLRVC
Sbjct: 690 KMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCL 749
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTAT ISK+ R VV D NRFHHFKNG CSC D+W
Sbjct: 750 DCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 13/108 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ +S E+++ +F ++ GL+ D T+ ++L A L +GM + KK +
Sbjct: 189 FSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLH-- 246
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITF 108
DV LT LI + + CG+ K F ++ +PD I++
Sbjct: 247 -------SDVYVLTGLISLYSKCGKSCKGRILFDQID----QPDLISY 283
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 166/399 (41%), Positives = 234/399 (58%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y + EA +FR ++ K +T + +T+ ++LLA +H GAL +G +H +++ +E
Sbjct: 261 YAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED 320
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
DV +G ++ K+V + TA+I M G KALE F M
Sbjct: 321 DVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI 380
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV+P+ ITFV VL ACSHAGL D FN M ++G+ P +EHYGC+V +LGRAG +
Sbjct: 381 DSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFL 440
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA +LI+ M M D + LL ACRIH N+E AE + +L EL P N G Y++LS+ Y
Sbjct: 441 QKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIY 500
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF--------------------- 256
+ S +WK V+R+R M R + KPPG L+E++G VH F
Sbjct: 501 ADSGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELN 560
Query: 257 ---VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
++AG+V N S V D+DEEEKE L +H+EKLAI FG+++ +PG + ++KNLRVC+
Sbjct: 561 RKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCS 620
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH +ISK+ +RE VV D RFHHFK+G CSC D+W
Sbjct: 621 DCHNVIKLISKIVDREFVVRDAKRFHHFKDGFCSCGDYW 659
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 25/120 (20%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----------------- 67
D + MVS++ AC+ + A + +H +++K+ + V +G L
Sbjct: 182 DSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARK 241
Query: 68 -------KDVMTLTALIVVLAMCGQGNKALEYFYEM-QIRGVKPDAITFVGVLVACSHAG 119
KD ++ +++ V A G N+A + F + + + V + IT VL+A SH+G
Sbjct: 242 IFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSG 301
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/400 (42%), Positives = 242/400 (60%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y + +EALLLF+E+ G T + VTM+S+L AC HLGA+++G W+H YI K+
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 401
Query: 56 -----------------NIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+IE V + K + + A+I AM G+ + + + F M
Sbjct: 402 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ G++PD ITFVG+L ACSH+G++D F M++ Y + P +EHYGC++ +LG +G
Sbjct: 462 RKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGL 521
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+AEE+I M M D + LL AC++H N+E E A+ L+++ P+N GSYV+LSN
Sbjct: 522 FKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNI 581
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+S+ +W +V + R L+ ++ +KK PGC IE+D VVHEF+
Sbjct: 582 YASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEM 641
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
KAGFVP+ SEVL +M+EE KE AL H+EKLAI FGL+S PG + I+KNLRVC
Sbjct: 642 EVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVC 701
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+CH AT +ISK+Y RE + DR RFHHF++G CSC D+W
Sbjct: 702 RNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 23/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI-------- 52
Y E +EAL LF+++ + D+ TMV+++ AC G++E+G +H +I
Sbjct: 241 YAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSN 300
Query: 53 ----------MKKNIEVDVGLGM----ALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
K E++ G+ KDV++ LI +AL F EM
Sbjct: 301 LKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 360
Query: 99 RGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G P+ +T + +L AC+H G +D R H + G+ + L+ + + G I
Sbjct: 361 SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDI 420
Query: 158 AKAEELIKNM 167
A ++ ++
Sbjct: 421 EAAHQVFNSI 430
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ E+A +F + H+ D V+ +L+ G +E L I
Sbjct: 179 YVQNGRLEDAHKVFDKSPHR----DVVSYTALIKGYASRGYIENAQKLFDEI-------- 226
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+KDV++ A+I A G +ALE F +M V+PD T V V+ AC+ +G
Sbjct: 227 -----PVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
+ E +L + +G +++ L+ + + G + A L + +P
Sbjct: 282 I-ELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP 328
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 163/400 (40%), Positives = 240/400 (60%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQH--KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
Y ++ +AL L+R++ + + + VT+ ++LLAC H G ++ G +H +++ +E
Sbjct: 270 YAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLE 329
Query: 59 VDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+V +G ++ K++++ +A+I M G G +AL+ F EM
Sbjct: 330 ENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEM 389
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
G P+ ITF+ VL ACSHAGL+D+ +N M +++GI P +EHYGC+V +LGRAG
Sbjct: 390 CRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGC 449
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A LIK M + D + G LL ACRIH N+E AE +A++L EL N G YV+LSN
Sbjct: 450 LDEAYGLIKEMKVKPDAAIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNI 509
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+ + WK V+R+R L+ R I+KPPG +E+ G H F
Sbjct: 510 YAEAGMWKDVERMRVLVKTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKL 569
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+AG+VPN VL D+DEEEK +AL++H+EKLAI F L++ +PG +I +IKNLRVC
Sbjct: 570 LEKMQEAGYVPNTGSVLHDLDEEEKASALHIHSEKLAIAFALMNSVPGSVIHVIKNLRVC 629
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTA +I+K+ RE +V D RFHHFK+GSCSC D+W
Sbjct: 630 TDCHTAIKLITKIAQREIIVRDLQRFHHFKDGSCSCGDYW 669
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 166/400 (41%), Positives = 238/400 (59%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTG-DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y + +AL+LF+++ +G D++T+V+ L AC+ +GALE G W+H ++ I +
Sbjct: 233 YAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRL 292
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+V + L KD++ A+I AM G AL F EMQ
Sbjct: 293 NVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQ 352
Query: 98 -IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
I G++P ITF+G L AC+HAGLV+E I F M ++YGI+P IEHYGCLV +LGRAG+
Sbjct: 353 GITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQ 412
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A E IKNM M D + +LG+C++H + + A+ L+ L N G YV+LSN
Sbjct: 413 LKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNI 472
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF-------------------- 256
Y+S ++ V ++R LM E+ I K PG IE++ VHEF
Sbjct: 473 YASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKI 532
Query: 257 ---VKA-GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+K+ G+VPN + VL D++E EKE +L +H+E+LAI +GL+S PG ++I KNLRVC
Sbjct: 533 SERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVC 592
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+DCHT T +ISK+ R+ V+ DRNRFHHF +GSCSC DFW
Sbjct: 593 SDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 166/398 (41%), Positives = 236/398 (59%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL +F +Q +G+ ++V+MV +L ACTHL L+ G W+H Y+ + + +
Sbjct: 219 YAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMT 278
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL ++V T ++ I LAM G G ++L+ F +M+
Sbjct: 279 VTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKR 338
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+P+ ITF+ VL CS GLV+E HF+ M YGI P +EHYG +V + GRAGR+
Sbjct: 339 EGVQPNGITFISVLKGCSVVGLVEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLK 398
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A I +MPM LL ACR++ N E E A ++++EL N G+YV+LSN Y+
Sbjct: 399 EALNFINSMPMRPHVGAWSALLHACRMYKNKELGEIAQRKIVELEDKNDGAYVLLSNIYA 458
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
+ W+ V +R+ M + +KK PGC +IEVDG VHEF+
Sbjct: 459 DYKNWESVSSLRQTMKAKGVKKLPGCSVIEVDGEVHEFIVGDKSHPRYDEIEMKLEEISK 518
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+G+V N + VLFD++EEEKE AL+ H+EK+AI FGL+S V IR++ NLR+C D
Sbjct: 519 CLRLSGYVANTNPVLFDIEEEEKEDALSKHSEKVAIAFGLISLKGVVPIRVVMNLRICWD 578
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH +ISK++NRE +V DRNRFHHFK+G CSCKD+W
Sbjct: 579 CHNVAKMISKIFNREIIVRDRNRFHHFKDGECSCKDYW 616
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 16/144 (11%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKDVMTLTALIVVLAMCG 84
D VT ++L AC G ++ +K + M +D +T A+I A CG
Sbjct: 177 DLVTQTAMLNACAKCGDIDFA--------RKMFD-----EMPERDHVTWNAMIAGYAQCG 223
Query: 85 QGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEH 143
+ +AL+ F+ MQ+ GVK + ++ V VL AC+H ++D R H + E+Y +R ++
Sbjct: 224 RSREALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAYV--ERYKVRMTVTL 281
Query: 144 YGCLVYILGRAGRIAKAEELIKNM 167
LV + + G + +A ++ M
Sbjct: 282 GTALVDMYAKCGNVDRAMQVFWGM 305
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 165/399 (41%), Positives = 237/399 (59%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----KN 56
Y + EAL LFRE+Q K L +++T++S+L +C LG+L++G W+H Y K K
Sbjct: 207 YARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKY 266
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
++V+ L M KD +A+IV A GQ ++ F M+
Sbjct: 267 VKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRS 326
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V+PD ITF+G+L ACSH GLV+E +F+ M ++GI PSI+HYG +V +LGRAG +
Sbjct: 327 ENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLE 386
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A E I +P++ + LL AC H+NLE AE+ ++++LEL +GG YVILSN Y+
Sbjct: 387 DAYEFIDKLPISPTPMLWRILLAACSSHNNLELAEKVSERILELDDSHGGDYVILSNLYA 446
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
++KW+ V +R++M +R K PGC IEV+ VVHEF
Sbjct: 447 RNKKWEAVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVK 506
Query: 259 ----AGFVPNKSEVLF-DMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
AG+VP+ S V+ DM ++EKE L H+EKLAI FGL++ PG IR++KNLRVC
Sbjct: 507 ELKLAGYVPDTSMVVHADMGDQEKEITLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRVCR 566
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+A +IS ++ R+ V+ D RFHHF++G CSC+DFW
Sbjct: 567 DCHSAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCRDFW 605
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 27/183 (14%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
E LF E+ L D T SLL AC ALE G LH MK ++ +V + L
Sbjct: 114 EVFNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGVDDNVYVCPTLI 173
Query: 69 DVMT----------------------LTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
++ T A+I A + N+AL F EMQ + +KP+ I
Sbjct: 174 NMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPNEI 233
Query: 107 TFVGVLVACSHAGLVD--ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
T + VL +C+ G +D + I + ++K+G ++ L+ + + G + A +
Sbjct: 234 TLLSVLSSCALLGSLDLGKWIHEY---AKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIF 290
Query: 165 KNM 167
+NM
Sbjct: 291 ENM 293
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 164/397 (41%), Positives = 235/397 (59%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V++S +EA+ LFR +Q +G+T DKVTMV + AC +LGAL++ W+H YI KK+I D+
Sbjct: 449 VQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDM 508
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
LG AL +DV TA I +AM G G A+E F EM +
Sbjct: 509 HLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQ 568
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G+KPD + FV +L A SH GLV++ F M + YGI P HYGC+V +LGRAG +++
Sbjct: 569 GIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSE 628
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A LI +M M + + G LL ACR+H N++ A AA+++ EL P+ G +V+LSN Y+S
Sbjct: 629 ALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYAS 688
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA-------------------- 259
+ +W V ++R + E+ K PG IE++G + EF
Sbjct: 689 AGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCR 748
Query: 260 ----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
G+VP+ + VL D++E+EKE L+ H+EKLAI F L+S G+ IR+ KNLR+C+DC
Sbjct: 749 LRDIGYVPDLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTGQGMPIRVAKNLRICSDC 808
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H+ ++SK Y+RE +V D NRFH F+ G CSC D+W
Sbjct: 809 HSFAKLVSKSYSREIIVRDNNRFHFFQQGFCSCGDYW 845
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 25/137 (18%)
Query: 5 SAC---EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
SAC +A+++FR++ G D T +L ACT AL G +H I+K E D+
Sbjct: 115 SACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDM 174
Query: 62 GL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ M+ ++V++ T+LI A G +A+ F+EM
Sbjct: 175 FVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEV 234
Query: 100 GVKPDAITFVGVLVACS 116
G++P+++T VGV+ AC+
Sbjct: 235 GIRPNSVTMVGVISACA 251
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKDVMT 72
L ++ GL +++ +L+ +CT +G E + +K +E+ + +
Sbjct: 52 LHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEY-----AQKALELFIEDNGIMGTHYM 106
Query: 73 LTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE 123
++LI + CG G KA+ F ++ G PD TF VL AC+ + + E
Sbjct: 107 FSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTE 157
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
YV E L + E+ G D++TM+S + AC+ L + G W H Y+++ +E
Sbjct: 316 YVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLE 373
>gi|212721478|ref|NP_001131178.1| uncharacterized protein LOC100192486 [Zea mays]
gi|194690792|gb|ACF79480.1| unknown [Zea mays]
Length = 617
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 167/398 (41%), Positives = 231/398 (58%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ EAL+LF E+ G T + T+VS+L AC +G L+ G W+H Y+ + +++
Sbjct: 221 YMHVGRSREALMLFDEMLSAGTTVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMS 280
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ LG AL D V T T+ + LAM G G + L+ F M+
Sbjct: 281 IKLGTALVDMYSKCGAVVTAMEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEG 340
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++P+ ++FV VL CS AGLVDE + F+ M +KYG+ P EHYGC+V + GRAGR+
Sbjct: 341 AGIQPNGVSFVAVLRGCSMAGLVDEGRACFDSM-DKYGVDPWPEHYGCMVDLYGRAGRLD 399
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A I +MPM V G LL A RIH++++ + A +LL + +N ++V LSN Y+
Sbjct: 400 DAISFINDMPMEPHEGVWGALLNASRIHNSVDLGKYALDKLLAIESENDAAHVQLSNIYA 459
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAG------------------ 260
S+ WK V R+R +M + +KK PG IEVDG VHEF G
Sbjct: 460 ESQNWKGVSRVRGMMKAKGVKKVPGWSTIEVDGKVHEFYVGGRLHPRYNEIELMLAEMDR 519
Query: 261 ------FVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ N EVLFD++EEEKE A++LH+EKLA+ FGL+ V IRI+KNLRVC D
Sbjct: 520 RLRLQGYTANTREVLFDIEEEEKEGAISLHSEKLALAFGLIVLPEDVEIRIVKNLRVCMD 579
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH ++SKV+NRE V+ DRNRFHHFK G CSC+D+W
Sbjct: 580 CHRYIKLVSKVFNREIVMRDRNRFHHFKGGECSCRDYW 617
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 168/391 (42%), Positives = 239/391 (61%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+EAL LF +Q G+ D V +VS L AC LG L+ G W+H YI K IE+D LG L
Sbjct: 232 KEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVL 291
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
K V TA+I A+ G+G +ALE+F +MQ GV+P+
Sbjct: 292 IDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQ 351
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TF G+L ACSHAGLV E F M +G +PSIEHYGC+V +LGRAG + +AEELI+
Sbjct: 352 MTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIE 411
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
NMP+ + + G LL AC IH NLE ++ + L+++ P +GG Y+ L++ ++++ +W +
Sbjct: 412 NMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQ 471
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
R+R M E+ + K PGC +I V+G HEF+ + G+
Sbjct: 472 AARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGY 531
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P ++L D++++EKETA++ H+EKLA+TFGL+S PG+ IRI+KNLRVC DCHT +
Sbjct: 532 KPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKL 591
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISKVY RE ++ DR RFH FK+G+C+C D+W
Sbjct: 592 ISKVYAREILMRDRTRFHLFKDGNCTCGDYW 622
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 22/169 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + A LLF +V + D V+ S++ T G +E+ + ++ ++NI
Sbjct: 163 YSKSGDIKSARLLFDQVDQR----DTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNI--- 215
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
++ T++I G+ +AL F+ MQ G+K D + V L AC+ G+
Sbjct: 216 ----------ISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGV 265
Query: 121 VDE-RISHFNLMSEKYGIRPSIEHYGC-LVYILGRAGRIAKAEELIKNM 167
+D+ + H + + I P + GC L+ + + G + +A E+ + M
Sbjct: 266 LDQGKWIHAYIKKHEIEIDPIL---GCVLIDMYAKCGDLEEAIEVFRKM 311
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 168/391 (42%), Positives = 239/391 (61%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+EAL LF +Q G+ D V +VS L AC LG L+ G W+H YI K IE+D LG L
Sbjct: 232 KEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVL 291
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
K V TA+I A+ G+G +ALE+F +MQ GV+P+
Sbjct: 292 IDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQ 351
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TF G+L ACSHAGLV E F M +G +PSIEHYGC+V +LGRAG + +AEELI+
Sbjct: 352 MTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIE 411
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
NMP+ + + G LL AC IH NLE ++ + L+++ P +GG Y+ L++ ++++ +W +
Sbjct: 412 NMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQ 471
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
R+R M E+ + K PGC +I V+G HEF+ + G+
Sbjct: 472 AARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGY 531
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P ++L D++++EKETA++ H+EKLA+TFGL+S PG+ IRI+KNLRVC DCHT +
Sbjct: 532 KPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKL 591
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISKVY RE ++ DR RFH FK+G+C+C D+W
Sbjct: 592 ISKVYAREILMRDRTRFHLFKDGNCTCGDYW 622
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 22/169 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + A LLF +V + D V+ S++ T G +E+ + ++ ++NI
Sbjct: 163 YSKSGDIKSARLLFDQVDQR----DTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNI--- 215
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
++ T++I G+ +AL F+ MQ G+K D + V L AC+ G+
Sbjct: 216 ----------ISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGV 265
Query: 121 VDE-RISHFNLMSEKYGIRPSIEHYGC-LVYILGRAGRIAKAEELIKNM 167
+D+ + H + + I P + GC L+ + + G + +A E+ + M
Sbjct: 266 LDQGKWIHAYIKKHEIEIDPIL---GCVLIDMYAKCGDLEEAIEVFRKM 311
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 172/399 (43%), Positives = 238/399 (59%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------ 54
+ E+ EEAL L+ E+ KG+ D T+VSLL AC +GAL +G +H Y++K
Sbjct: 197 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 256
Query: 55 ---KNIEVDVGL-------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ- 97
N+ +D+ M K+ ++ T+LIV LA+ G G +A+E F M+
Sbjct: 257 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 316
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G+ P ITFVG+L ACSH G+V E +F M E+Y I P IEH+GC+V +L RAG++
Sbjct: 317 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 376
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA E IK+MPM + + LLGAC +H + + AE A Q+L+L P++ G YV+LSN Y
Sbjct: 377 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMY 436
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+S ++W V++IR+ M +KK PG L+EV VHEF+
Sbjct: 437 ASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMT 496
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+VP S V D++EEEKE A+ H+EK+AI F L+S I ++KNLRVC
Sbjct: 497 GRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCA 556
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A ++SKVYNRE VV DR+RFHHFKNGSCSC+D+W
Sbjct: 557 DCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 28/192 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLT-GDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN--- 56
Y E A L+RE++ GL D T L+ A T + + +G +H +++
Sbjct: 95 YAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGS 154
Query: 57 -IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
I V L M KD++ ++I A G+ +AL + EM
Sbjct: 155 LIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMN 214
Query: 98 IRGVKPDAITFVGVLVACSHAGLVD--ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
+G+KPD T V +L AC+ G + +R+ + + K G+ ++ L+ + R G
Sbjct: 215 SKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI---KVGLTRNLHSSNVLLDLYARCG 271
Query: 156 RIAKAEELIKNM 167
R+ +A+ L M
Sbjct: 272 RVEEAKTLFDEM 283
>gi|242032459|ref|XP_002463624.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
gi|241917478|gb|EER90622.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
Length = 607
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 171/398 (42%), Positives = 233/398 (58%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV +A+ LFRE+Q G+ D+VT++ +L A LGALE+ W+ ++ ++ I
Sbjct: 210 YVRGGLSSDAVGLFREMQASGVRPDEVTVIGVLAAAADLGALELARWVGRFVEREGIGKS 269
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V L GM + V++ T++I LAM G+G +A+ F M+
Sbjct: 270 VTLCNALIDALAKCGDVDGAVAVFQGMEERTVVSWTSVIDALAMEGRGKEAVAVFEAMKT 329
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+PD + F+GVL ACSHAG+VDE +F+ M +YGI P IEHYGC+V + GRAG +
Sbjct: 330 AGVRPDDVVFIGVLTACSHAGMVDEGYGYFDSMKMEYGIDPKIEHYGCMVDMFGRAGMVE 389
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E I MPM + + L+ ACR H LE E + LL P + +YV+LSN Y+
Sbjct: 390 RAMEFIHTMPMKPNPIIWRTLVAACRAHGRLELGESITRNLLNEYPAHEANYVMLSNVYA 449
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+++WK+ IR M++R IKK PGC L+E+DG VHEF+
Sbjct: 450 LTQRWKEKSEIRREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQWKEIYMMVEEMAR 509
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G + SEVL D+DEE+KE AL H+EKLAI F L+ PG +R++KNLRVC+D
Sbjct: 510 ELKHVGHISATSEVLLDLDEEDKEGALQWHSEKLAIAFVLLRTPPGTQVRVVKNLRVCSD 569
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A IS VYNRE +V DR+RFH FKNGSCSC DFW
Sbjct: 570 CHAAIKCISLVYNREIIVRDRSRFHRFKNGSCSCNDFW 607
>gi|357114903|ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 611
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 170/398 (42%), Positives = 236/398 (59%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV +A++LFR +Q G+ D+VT++ +L A LGALE+ W+ ++ ++ I
Sbjct: 214 YVRAGLSSDAVVLFRGMQVSGVRPDEVTVIGVLAAAADLGALELTRWVGRFVEREGIGKS 273
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V L GM + V++ T++I LAM G+G +A+ F EM+
Sbjct: 274 VTLCNALIDTLAKCGDVDGAVAVFEGMEERTVVSWTSVIDALAMEGRGKEAVGVFEEMKA 333
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV PD + F+GVL ACSHAG+VDE +F+ M +YGI P IEHYGC+V + GRAG +
Sbjct: 334 VGVLPDDVAFIGVLTACSHAGMVDEGRGYFDSMKTEYGIEPKIEHYGCMVDMFGRAGMVE 393
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+ E ++ MPM + + L+ ACR H LE E + LL P + +YV+LSN Y+
Sbjct: 394 QGLEFVRAMPMKPNPIIWRTLVAACRAHGRLELGESITRNLLNEFPAHEANYVMLSNVYA 453
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+++WK+ IR M++R IKK PGC L+E+DG VHEF+
Sbjct: 454 LTQRWKEKSEIRREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQYKEIYRMVEEMSR 513
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G + SEVL D+DEE+KE AL H+EKLAI F L+ PG +R++KNLRVC+D
Sbjct: 514 ELRRIGHIAATSEVLLDLDEEDKEGALQWHSEKLAIAFVLLRTPPGTQVRVVKNLRVCSD 573
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A IS+VYNRE VV DR+RFH FK+GSCSCKDFW
Sbjct: 574 CHAAIKCISQVYNREIVVRDRSRFHRFKDGSCSCKDFW 611
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 25/132 (18%)
Query: 5 SACEEALLLFREVQHKGLTGDKVTMVSLLLACTHL-GALEVGMWLHPYIMKKNIEVD--- 60
SA A F + + +K T LL +C L G+ +VG+ H +K D
Sbjct: 114 SARRRAAAFFPLMLRAAVAPNKFTFPFLLKSCAALPGSPDVGLQAHAAALKFGFAADHYV 173
Query: 61 ----------VGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
G G M + +T +A+I G + A+ F MQ+
Sbjct: 174 SNTLIHMYSCFGAGFLGDARNVFERMPRESAVTWSAMIGGYVRAGLSSDAVVLFRGMQVS 233
Query: 100 GVKPDAITFVGV 111
GV+PD +T +GV
Sbjct: 234 GVRPDEVTVIGV 245
>gi|414880744|tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, partial [Zea mays]
Length = 1822
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 167/398 (41%), Positives = 231/398 (58%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ EAL+LF E+ G T + T+VS+L AC +G L+ G W+H Y+ + +++
Sbjct: 1426 YMHVGRSREALMLFDEMLSAGTTVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMS 1485
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ LG AL D V T T+ + LAM G G + L+ F M+
Sbjct: 1486 IKLGTALVDMYSKCGAVVTAMEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEG 1545
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++P+ ++FV VL CS AGLVDE + F+ M +KYG+ P EHYGC+V + GRAGR+
Sbjct: 1546 AGIQPNGVSFVAVLRGCSMAGLVDEGRACFDSM-DKYGVDPWPEHYGCMVDLYGRAGRLD 1604
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A I +MPM V G LL A RIH++++ + A +LL + +N ++V LSN Y+
Sbjct: 1605 DAISFINDMPMEPHEGVWGALLNASRIHNSVDLGKYALDKLLAIESENDAAHVQLSNIYA 1664
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAG------------------ 260
S+ WK V R+R +M + +KK PG IEVDG VHEF G
Sbjct: 1665 ESQNWKGVSRVRGMMKAKGVKKVPGWSTIEVDGKVHEFYVGGRLHPRYNEIELMLAEMDR 1724
Query: 261 ------FVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ N EVLFD++EEEKE A++LH+EKLA+ FGL+ V IRI+KNLRVC D
Sbjct: 1725 RLRLQGYTANTREVLFDIEEEEKEGAISLHSEKLALAFGLIVLPEDVEIRIVKNLRVCMD 1784
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH ++SKV+NRE V+ DRNRFHHFK G CSC+D+W
Sbjct: 1785 CHRYIKLVSKVFNREIVMRDRNRFHHFKGGECSCRDYW 1822
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 232/398 (58%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++++ EE+L +F +++ G+ D+ + S+L AC L LE G +H +K +
Sbjct: 440 YAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWS 499
Query: 61 ----------------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + M +KDV+T TA+IV A G+G +L+++ M
Sbjct: 500 QSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVS 559
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G +PD ITF+G+L ACSHAGLVDE +F M++ YGI+P EHY C++ + GR+G++
Sbjct: 560 SGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLD 619
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A++L+ M + D V LL ACR+H+NLE AERAA L EL P N YV+LSN YS
Sbjct: 620 EAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYS 679
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+SRKW V +IR+LM + I K PGC +E++ V+ F+
Sbjct: 680 ASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIIL 739
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+VP+ S L DMD+E KE L H+EKLA+ FGL++ P IRI KNLRVC D
Sbjct: 740 RIKEAGYVPDMSFSLHDMDKEGKEVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGD 799
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A IS+V+ R ++ D N FHHF+ G CSC D+W
Sbjct: 800 CHSAMKYISRVFTRHIILRDSNCFHHFREGECSCGDYW 837
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 29/185 (15%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV------- 61
EA LFR ++ +G + T+ S+L C+ LG ++ G +H +++K E +V
Sbjct: 145 EAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLV 204
Query: 62 -----------------GLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
GL K+ + TA++ A G G KA+E+F M +GV+ +
Sbjct: 205 DMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECN 264
Query: 105 AITFVGVLVACSH--AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE 162
TF +L ACS A E++ F + K G ++ LV + + G + A+
Sbjct: 265 QYTFPTILTACSSVLARCFGEQVHGFIV---KSGFGSNVYVQSALVDMYAKCGDLKNAKN 321
Query: 163 LIKNM 167
+++ M
Sbjct: 322 MLETM 326
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 23/181 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACT-------HLGALEVGMWLHPYIMKKNIEVD 60
EEAL LF+ + + + D T S+L C + L + Y + N VD
Sbjct: 348 EEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVSNALVD 407
Query: 61 -------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
V M KDV++ T+L+ A ++L+ F +M++ GV PD
Sbjct: 408 MYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFI 467
Query: 108 FVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
+L AC+ L++ + H + + K G+R S Y LV + + G + A+ + +
Sbjct: 468 VASILSACAELTLLEFGKQVHLDFI--KSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVS 525
Query: 167 M 167
M
Sbjct: 526 M 526
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 22/137 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +A+ FR + +G+ ++ T ++L AC+ + A G +H +I+K +
Sbjct: 240 YAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSN 299
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL DV++ +L+V G +AL F M
Sbjct: 300 VYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHG 359
Query: 99 RGVKPDAITFVGVLVAC 115
R +K D TF VL C
Sbjct: 360 RNMKIDDYTFPSVLNCC 376
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 166/399 (41%), Positives = 229/399 (57%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + + E A LF+E+Q++ L D +T S+L C + ALE+G +H I + +++D
Sbjct: 507 HAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLD 566
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL +DVM+ TA+I A G+ KA+E F++MQ
Sbjct: 567 VNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQN 626
Query: 99 RGVKP-DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G +P D TF +L AC+HAGLV E F+ M +YG+ P+IEHYGCLV +LGRA R
Sbjct: 627 EGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRF 686
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+AE LI MP D V LLGACRIH N+ AE AA L+L N Y++LSN Y
Sbjct: 687 QEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVY 746
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+++ +W V +IR +M R I+K PG IEVD ++HEF+
Sbjct: 747 AAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLS 806
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+AG+ P+ VL D+ + +ET+L H+E+LAI +GL+ PG IRI KNLR+C
Sbjct: 807 VEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICG 866
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTA+ ISK+ RE + D NRFH FKNG CSC+D+W
Sbjct: 867 DCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 905
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 25/191 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + +E L LF ++ +G++ DKVT ++LL A T L+ G +H +++ + D
Sbjct: 204 YAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSD 263
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL +DV+ ALI LA G +A E +Y M+
Sbjct: 264 IRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRS 323
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV + T++ +L ACS + ++ ++ H ++ + G ++ L+ + R G +
Sbjct: 324 DGVALNRTTYLSILNACSTSKALEAGKLIHSHISED--GHSSDVQIGNALISMYARCGDL 381
Query: 158 AKAEELIKNMP 168
KA EL MP
Sbjct: 382 PKARELFYTMP 392
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 131/300 (43%), Gaps = 31/300 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + ++A LF E+Q+ G +K+T +S+L AC LE G +H I+K + D
Sbjct: 103 YAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRD 162
Query: 61 ----------------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V G++ +DV++ ++ + A + L F +M
Sbjct: 163 PRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSS 222
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD +T++ +L A + ++DE L E+ G+ I LV + R G +
Sbjct: 223 EGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE-GLNSDIRVGTALVTMCVRCGDVD 281
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHD-NLEAAERAAQQLLELLPDNGGSYVILSNRY 217
A++ K + D V L+ A H N+EA E+ + + + N +Y+ + N
Sbjct: 282 SAKQAFKGI-ADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNAC 340
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEV-DGVVHEFVKAGFVPNKSEVLFDMDEEE 276
S+S+ + K I ++E +++ + ++ + + G +P E+ + M + +
Sbjct: 341 STSKALEAGKLIHSHISEDGHSSD-----VQIGNALISMYARCGDLPKARELFYTMPKRD 395
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 22/131 (16%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EA+ L++++Q +G+ +VT + LL AC + A G +H I++ I+ + L AL
Sbjct: 414 EAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALM 473
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+DV++ ++I A G A + F EMQ ++PD I
Sbjct: 474 NMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNI 533
Query: 107 TFVGVLVACSH 117
TF VL C +
Sbjct: 534 TFASVLSGCKN 544
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 25/170 (14%)
Query: 18 QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG------------- 64
Q + D+ T V+LL CT L +H +++ + D+ L
Sbjct: 19 QPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSV 78
Query: 65 ---------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC 115
M +DV++ +LI A G KA + F EMQ G P+ IT++ +L AC
Sbjct: 79 LDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTAC 138
Query: 116 -SHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
S A L + + H ++ Y P +++ L+ + G+ G + +A ++
Sbjct: 139 YSPAELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVF 186
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 229/398 (57%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ AL ++Q +G+ +K + VS+L AC+ ALE G +H I+K+ ++ D
Sbjct: 764 YAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGD 823
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL K+V+T A+I A G +KAL++F M
Sbjct: 824 VRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDK 883
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD TF +L AC+H+GLV E F+ + ++G+ P+IEHYGCLV +LGRAGR
Sbjct: 884 EGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQ 943
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE LI MP D V LLGACRIH N+ AE AA L+L N YV+LSN Y+
Sbjct: 944 EAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYA 1003
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ +W V +IR +M R I+K PG IEVD ++HEF+
Sbjct: 1004 AAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSL 1063
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+ P+ VL ++D+E +ET+L H+E+LAI +GL+ PG IRI KNLR+C D
Sbjct: 1064 EMERAGYSPDTQYVLHNLDKEHQETSLCTHSERLAIAYGLLKTPPGTPIRIFKNLRICGD 1123
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA+ ISK+ RE + D NRFH FKNG CSC+DFW
Sbjct: 1124 CHTASKFISKLVGREIIARDSNRFHTFKNGKCSCEDFW 1161
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 165/372 (44%), Gaps = 57/372 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + + E A LF E++ +GL DK+T S+L+ C + ALE+G +H I++ +++D
Sbjct: 562 HAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLD 621
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL ++VM+ TA+I A G+ KA E F++MQ
Sbjct: 622 VNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQN 681
Query: 99 RGVKPDAITFVGVLVACSHAGLVDER---ISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
G KP TF +L AC + +DE I+H +++ Y + + + L+ ++G
Sbjct: 682 DGFKPVKSTFSSILKACMSSACLDEGKKVIAH--ILNSGYELDTGVGN--ALISAYSKSG 737
Query: 156 RIAKAEELIKNMP----MALDHFVLG----GLLGACRIHDNLEAAERAAQQLLELLPDNG 207
+ A ++ MP M+ + + G GL G L+ A + +Q + L N
Sbjct: 738 SMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTA-----LQFAYQMQEQGVVL---NK 789
Query: 208 GSYVILSNRYSSSRKWKKVKRIRELMAERNIKKP--PGCILIEVDGVVHEFVKAGFVPNK 265
S+V + N SS ++ KR+ + +R ++ G LI + + K G +
Sbjct: 790 FSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISM------YAKCGSLEEA 843
Query: 266 SEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKV 325
EV FD E+ N A GL S + + D T T+I+S
Sbjct: 844 QEV-FDNFTEKNVVTWNAMINAYA-QHGLASKALD-FFNCMDKEGIKPDGSTFTSILSAC 900
Query: 326 YNRETVVMDRNR 337
N +VM+ NR
Sbjct: 901 -NHSGLVMEGNR 911
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 25/191 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + EE + LF ++ +G+ DKVT ++LL A T L+ G +H + + + D
Sbjct: 259 YAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSD 318
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL +DV+ ALI LA G +A E +Y+M+
Sbjct: 319 IRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRS 378
Query: 99 RGVKPDAITFVGVLVACSHA-GLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV + T++ VL ACS + L + H ++ + G ++ L+ + R G +
Sbjct: 379 DGVVMNRTTYLSVLNACSTSKALGAGELIHSHI--SEVGHSSDVQIGNSLISMYARCGDL 436
Query: 158 AKAEELIKNMP 168
+A EL MP
Sbjct: 437 PRARELFNTMP 447
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 22/131 (16%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EA+ L++++Q +G+ +VT + LL ACT+ A G +H I++ I+ + L AL
Sbjct: 469 EAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALM 528
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+D+++ ++I A G A + F EM+ G++PD I
Sbjct: 529 NMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKI 588
Query: 107 TFVGVLVACSH 117
TF VLV C +
Sbjct: 589 TFASVLVGCKN 599
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 104/247 (42%), Gaps = 31/247 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + ++A LF E+Q G K+T +S+L AC LE G +H I++ + D
Sbjct: 158 YAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRD 217
Query: 61 ----------------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V G+ +DV++ ++ + A + + F +M
Sbjct: 218 PRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSS 277
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD +T++ +L A + ++DE + ++ G+ I L + R G +A
Sbjct: 278 EGIPPDKVTYINLLDAFTTPSMLDEG-KRIHKLAVNEGLNSDIRVGTALATMFVRCGDVA 336
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPD----NGGSYVILS 214
A++ ++ D V L+ A H + E A +Q ++ D N +Y+ +
Sbjct: 337 GAKQALEAFA-DRDVVVYNALIAALAQHGHY---EEAFEQYYQMRSDGVVMNRTTYLSVL 392
Query: 215 NRYSSSR 221
N S+S+
Sbjct: 393 NACSTSK 399
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVA-CSHAG 119
V L M +DV++ +LI A G KA + F EMQ G P IT++ +L A CS A
Sbjct: 139 VFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAE 198
Query: 120 LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
L + H ++ Y P +++ L+ + G+ + A ++ +
Sbjct: 199 LEYGKKIHSKIIEAGYQRDPRVQN--SLLNMYGKCEDLPSARQVFSGI 244
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 168/382 (43%), Positives = 231/382 (60%), Gaps = 38/382 (9%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EAL LFRE+ +G+ D T+VSLL A LGALE+G +H Y++K + + + +L
Sbjct: 214 EALTLFREMSAEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLRENSHVTNSLL 273
Query: 69 DV--------------MTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVA 114
D+ ++ T+LIV LA+ G G +ALE F EM+ +G+ P ITFVGVL A
Sbjct: 274 DLYAKCDAIWEXERNAVSWTSLIVGLAVNGFGEEALELFREMEGQGLVPSEITFVGVLYA 333
Query: 115 CSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHF 174
CSH G++DE +F M E++GI P IEHYGC+V +L RAG + +A E I+NMP+ +
Sbjct: 334 CSHCGMLDEGFDYFRRMKEEFGIMPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAV 393
Query: 175 VLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMA 234
LLGAC IH +L E A LL+L P + G YV+LSN Y+S +W V+ IR M
Sbjct: 394 TWRTLLGACTIHGHLGLGETARSHLLKLEPKHSGDYVLLSNLYTSECRWADVQLIRRSML 453
Query: 235 ERNIKKPPGCILIEVDGVVHEFVKA------------------------GFVPNKSEVLF 270
+ +KK G L+E+ V+EF G+VP+ + VL
Sbjct: 454 KDGVKKTSGYSLVELGNRVYEFTMGNRSHPQSQDVYALLEKITELLKLEGYVPHTANVLA 513
Query: 271 DMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRET 330
D++EEEKE AL+ H+EK AI F ++ PG IR++KNLRVC DCH A +++KVY+RE
Sbjct: 514 DIEEEEKEQALSYHSEKXAIAFMRLNTAPGTTIRVMKNLRVCADCHMAIKLMAKVYDREI 573
Query: 331 VVMDRNRFHHFKNGSCSCKDFW 352
V+ DR RFHHF+ GSCSCKD+W
Sbjct: 574 VIRDRGRFHHFRGGSCSCKDYW 595
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 163/391 (41%), Positives = 230/391 (58%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+EA+ LFR +Q +G+ DK+T S L +C+ L+ G +H ++ +DV L AL
Sbjct: 381 DEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSAL 440
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
++V+ TA+I A G+ +ALEYF +M+ +G+KPD
Sbjct: 441 VSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDK 500
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TF VL AC+H GLV+E HF M YGI+P +EHY C V +LGRAG + +AE +I
Sbjct: 501 VTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVIL 560
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP V G LL ACRIH ++E ERAA+ +L+L PD+ G+YV LSN Y+++ +++
Sbjct: 561 TMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYED 620
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEF------------------------VKAGF 261
+++R++M +R++ K PG IEVDG VH F + G+
Sbjct: 621 AEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGY 680
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ VL D+DEE+K L H+E+LAIT+GL+ PG IRI+KNLRVC DCHTA+
Sbjct: 681 VPDTRFVLHDVDEEQKVQTLCSHSERLAITYGLMKTPPGTPIRIVKNLRVCGDCHTASKF 740
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISKV RE + D +RFHHF +G CSC DFW
Sbjct: 741 ISKVVGREIIARDAHRFHHFVDGVCSCGDFW 771
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 25/190 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + AL L ++Q + +K+T S+L CT ALE G +H YI++ +
Sbjct: 273 YAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGRE 332
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL +DV+T TA++ A G ++A++ F MQ
Sbjct: 333 IWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQ 392
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERIS-HFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+G+KPD +TF L +CS + E S H L+ Y + ++ LV + + G +
Sbjct: 393 QGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQ--SALVSMYAKCGSM 450
Query: 158 AKAEELIKNM 167
A + M
Sbjct: 451 DDARLVFNQM 460
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 25/183 (13%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EA + ++ G DKVT VSLL A T+ L+VG +H I K +E++ +G +L
Sbjct: 180 EAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLV 239
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
K+V+T T LI A GQ + ALE +MQ V P+ I
Sbjct: 240 GMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKI 299
Query: 107 TFVGVLVACSHA-GLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
T+ +L C+ L + H ++ YG I L+ + + G + +A +L
Sbjct: 300 TYTSILQGCTTPLALEHGKKVHRYIIQSGYG--REIWVVNALITMYCKCGGLKEARKLFG 357
Query: 166 NMP 168
++P
Sbjct: 358 DLP 360
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 27/161 (16%)
Query: 32 LLLACTHLGALEVGMWLHPYIMKKNIEVDVGL----------------------GMALKD 69
LL C L +LE G +H I+K I+ + L G+ ++
Sbjct: 102 LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRN 161
Query: 70 VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL--VDERISH 127
+++ TA+I Q +A + + M++ G KPD +TFV +L A ++ L V +++ H
Sbjct: 162 IVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKV-H 220
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
+ + P + LV + + G I+KA+ + +P
Sbjct: 221 MEIAKAGLELEPRVG--TSLVGMYAKCGDISKAQVIFDKLP 259
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 7 CEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVG 45
C EAL F +++ +G+ DKVT S+L ACTH+G +E G
Sbjct: 481 CREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEG 519
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 172/399 (43%), Positives = 238/399 (59%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------ 54
+ E+ EEAL L+ E+ KG+ D T+VSLL AC +GAL +G +H Y++K
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 55 ---KNIEVDVGL-------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ- 97
N+ +D+ M K+ ++ T+LIV LA+ G G +A+E F M+
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G+ P ITFVG+L ACSH G+V E +F M E+Y I P IEH+GC+V +L RAG++
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 243
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA E IK+MPM + + LLGAC +H + + AE A Q+L+L P++ G YV+LSN Y
Sbjct: 244 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMY 303
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+S ++W V++IR+ M +KK PG L+EV VHEF+
Sbjct: 304 ASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMT 363
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+VP S V D++EEEKE A+ H+EK+AI F L+S I ++KNLRVC
Sbjct: 364 GRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCA 423
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A ++SKVYNRE VV DR+RFHHFKNGSCSC+D+W
Sbjct: 424 DCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD-- 122
M KD++ ++I A G+ +AL + EM +G+KPD T V +L AC+ G +
Sbjct: 49 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 108
Query: 123 ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+R+ + + K G+ ++ L+ + R GR+ +A+ L M
Sbjct: 109 KRVHVYMI---KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 150
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 166/398 (41%), Positives = 237/398 (59%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EAL L+RE++ G+ D ++MVS+L AC+ +GAL +G +H ++ +EVD
Sbjct: 188 YAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVD 247
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ LG AL KDV+T +++I+ LA G G+ AL F EM
Sbjct: 248 MKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMIS 307
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+G++P+ ITF+GVL+AC+H GLV++ +F+ MS+ +G+ P +EHYGC+V +LGRAG +
Sbjct: 308 QGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVE 367
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A ELI++M D + LLGACRIH N+E AE A +L L P G YV+LSN Y+
Sbjct: 368 EAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKVLDPLADGHYVLLSNIYA 427
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ W+ V +R+ + NI++ PG IE + VHEFV
Sbjct: 428 QANSWEGVAEMRKTIRRENIQRVPGRSSIEWENTVHEFVSGDRSHPRIEEIYKMLEEMMD 487
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+ P S VL D+DE+ K+ AL H+EKLAI FGL+ +RI KNLR C D
Sbjct: 488 RLRQAGYRPMTSLVLQDIDEQSKKRALAEHSEKLAIAFGLLVTPARSTLRITKNLRACED 547
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A +IS Y+R+ +V DRNRFHHF G CSCKD+W
Sbjct: 548 CHSAIKLISLAYDRKLIVRDRNRFHHFSEGQCSCKDYW 585
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 48 LHPYIMKKNIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+H Y ++ ++ + ++ G +D + +++I A +ALE + EM++ GV PD
Sbjct: 154 IHGYAVRGDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDC 213
Query: 106 ITFVGVLVACSHAG 119
I+ V VL ACS G
Sbjct: 214 ISMVSVLSACSAMG 227
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 313 bits (803), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 165/392 (42%), Positives = 229/392 (58%), Gaps = 47/392 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+E+L LFR++Q + D++T+V +L AC GAL+ G ++H I K I D+ L AL
Sbjct: 94 QESLALFRKMQLHKIEPDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETAL 153
Query: 68 KD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D V T A+I LAM G G A+ F +M+ + PD
Sbjct: 154 VDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDD 213
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TF+ +L ACSHAGLVDE ++ F M K+ I P +EHYGC+V +L RA ++ A I+
Sbjct: 214 VTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIE 273
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
NMP+ + + LLGACR + + AE+ ++++EL PD+ G YV+LSN Y+ +W
Sbjct: 274 NMPIKANSVLWATLLGACRSGGHFDLAEKIXRRVIELEPDSCGRYVMLSNLYAGVSQWDH 333
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------------KAG 260
++R+ M + I+K PGC IE++G++H+FV G
Sbjct: 334 ALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGG 393
Query: 261 FVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATN 320
VP + VLFD++EEEKE +L LH+EKLAI GL+S G IRI+KNLRVCNDCH+
Sbjct: 394 HVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLK 453
Query: 321 IISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ SKVYNRE V DR+RFHHFK GSCSC DFW
Sbjct: 454 VTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 485
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 26/209 (12%)
Query: 22 LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-------------- 67
L D+VTMVSL+ AC LG LE G LH Y + ++ ++ + A+
Sbjct: 7 LRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQ 66
Query: 68 --------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
KDV++ T+++ LA G ++L F +MQ+ ++PD IT VGVL AC+ G
Sbjct: 67 EVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTG 126
Query: 120 LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGL 179
+D+ + +L+ +K+ I + LV + + G I A ++ + M + + F +
Sbjct: 127 ALDQG-KYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR-NVFTWNAM 184
Query: 180 LGACRIHDNLEAAERAAQQLL--ELLPDN 206
+G +H + E A Q+ +L+PD+
Sbjct: 185 IGGLAMHGHGEDAISLFDQMEXDKLMPDD 213
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 165/399 (41%), Positives = 235/399 (58%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y + EA +FR V++K +T + +T+ ++LLA +H GAL +G +H +++ +E
Sbjct: 261 YAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED 320
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
DV +G ++ K+V + TA+I M G KALE F M
Sbjct: 321 DVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI 380
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV+P+ ITFV VL ACSHAGL E FN M ++G+ P +EHYGC+V +LGRAG +
Sbjct: 381 DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFL 440
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA +LI+ M M D + LL ACRIH N+E AE + +L EL N G Y++LS+ Y
Sbjct: 441 QKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIY 500
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF--------------------- 256
+ + +WK V+R+R +M R + KPPG L+E++G VH F
Sbjct: 501 ADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELN 560
Query: 257 ---VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
++AG+V N S V D+DEEEKE L +H+EKLAI FG+++ +PG + ++KNLRVC+
Sbjct: 561 RKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCS 620
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH +ISK+ +RE VV D RFHHFK+G CSC D+W
Sbjct: 621 DCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 159/401 (39%), Positives = 233/401 (58%), Gaps = 49/401 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWL-HPYI------- 52
Y + C EAL LF+E++ G+ D+VT+V++L AC LGA ++G L H YI
Sbjct: 322 YSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQ 381
Query: 53 -----------------MKKNIEVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYE 95
+ +E+ +G +K ++I LA G G A+ F E
Sbjct: 382 NTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRE 441
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
+ G+KPD +TFVGVL AC H+GL++E F M YGI+P +EHYGC+V +LGR G
Sbjct: 442 LISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYG 501
Query: 156 RIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSN 215
+ +A +L++ MP + + LL ACR H N++ E A Q+LLE+ +G YV+LSN
Sbjct: 502 CLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSN 561
Query: 216 RYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------ 257
+ + +W++ +++R++M + I+KPPG IE+ G +H FV
Sbjct: 562 ILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKD 621
Query: 258 ------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
AG+VPN ++V+FD+DEEEKE+ ++ H+EKLA+ FGL+ P IRI+KNLR+
Sbjct: 622 MAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLRI 681
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH A ++S++Y RE V D RFHHF+NGSCSC DFW
Sbjct: 682 CADCHKAFKLVSEIYGREITVRDTMRFHHFRNGSCSCMDFW 722
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 18/204 (8%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E + E AL LF E+Q+ G+ D+ T V+L C+ L VG +H + K +D
Sbjct: 187 YAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSID 246
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+++ +A++ + A CG N A F M G A + ++ + G
Sbjct: 247 -------SNILLKSAIVDMYAKCGLINIAERVFSTM---GTSKSAAAWSSMVCGYARCGE 296
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP---MALDHFVLG 177
++ FN M E+ + + ++ +AG+ ++A EL K M + D L
Sbjct: 297 INVARKLFNHMHER-----DVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLV 351
Query: 178 GLLGACRIHDNLEAAERAAQQLLE 201
+L AC + +R Q +E
Sbjct: 352 AVLSACARLGAFDLGKRLYHQYIE 375
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 23/139 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTG-DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y EA++L+ + KG+ + T LL +C L +LE G +H +I+K E
Sbjct: 85 YSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFES 144
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
D+ + AL +D+++ +I A Q AL F EMQ
Sbjct: 145 DLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQ 204
Query: 98 IRGVKPDAITFVGVLVACS 116
G+ PD TFV + CS
Sbjct: 205 NSGILPDEFTFVALFSVCS 223
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 167/398 (41%), Positives = 230/398 (57%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ EALLLF +++ GL D TMV LL A LGAL G LH I ++ +E D
Sbjct: 345 YIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERD 404
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL +DV T +A+I LA G G ALE+F+ M+
Sbjct: 405 VYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKC 464
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G +++T++ VL ACSH+ L+DE +F+ M + IRP IEHYGC++ +LGR+G +
Sbjct: 465 DGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLD 524
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +L++ MPM + + +L ACR+H N++ A+ AA LL+L P YV + N Y
Sbjct: 525 EAMDLVQTMPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDAVYVQMYNIYI 584
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
SR+W+ +IR LM +R +KK G I V G VH+F+
Sbjct: 585 DSRQWEDASKIRRLMEKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIAEIVVMMEEIGR 644
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+ P S++ D+DEEEKE AL H+EKLAI FGLVS P + + IIKNLRVC D
Sbjct: 645 RLKSAGYSPITSQITVDVDEEEKEQALLAHSEKLAIAFGLVSLAPNLPVHIIKNLRVCED 704
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A +IS+++NRE +V DR+RFHHF+ G CSC DFW
Sbjct: 705 CHSAIKLISRLWNREIIVRDRSRFHHFRGGVCSCNDFW 742
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 22/186 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y EA+ F + G+ D+VT++ +L AC L L G LH + K
Sbjct: 212 YSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKR---- 267
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM-QIRGVKPDAITFVGVLVACSHAG 119
M + D + + ALI + A CG +A E F + + RG +P + ++ G
Sbjct: 268 ----MLMSDKL-VVALIDMYAKCGDTGRAREVFDALGRGRGPQP----WNAMIDGYCKVG 318
Query: 120 LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM---PMALDHFVL 176
VD S F+ M + + + L+ GR+ +A L M + D+F +
Sbjct: 319 HVDIARSLFDQMEDH-----DVITFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTM 373
Query: 177 GGLLGA 182
GLL A
Sbjct: 374 VGLLTA 379
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 165/399 (41%), Positives = 235/399 (58%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y + EA +FR V++K +T + +T+ ++LLA +H GAL +G +H +++ +E
Sbjct: 261 YAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED 320
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
DV +G ++ K+V + TA+I M G KALE F M
Sbjct: 321 DVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI 380
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV+P+ ITFV VL ACSHAGL E FN M ++G+ P +EHYGC+V +LGRAG +
Sbjct: 381 DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFL 440
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA +LI+ M M D + LL ACRIH N+E AE + +L EL N G Y++LS+ Y
Sbjct: 441 QKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIY 500
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF--------------------- 256
+ + +WK V+R+R +M R + KPPG L+E++G VH F
Sbjct: 501 ADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELN 560
Query: 257 ---VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
++AG+V N S V D+DEEEKE L +H+EKLAI FG+++ +PG + ++KNLRVC+
Sbjct: 561 RKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCS 620
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH +ISK+ +RE VV D RFHHFK+G CSC D+W
Sbjct: 621 DCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 166/400 (41%), Positives = 236/400 (59%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTG-DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y + +AL+LF+++ G D++T+V+ L AC+ +GALE G W+H ++ I +
Sbjct: 231 YSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRL 290
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+V + AL KD++ A+I AM G AL F EMQ
Sbjct: 291 NVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQ 350
Query: 98 -IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
I G++P ITF+G L AC+HAGLV+E I F M ++YGI+P IEHYGCLV +LGRAG+
Sbjct: 351 GITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQ 410
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A E+IKNM M D + +LG+C++H + A+ L+ N G YV+LSN
Sbjct: 411 LKRAYEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNISNSGIYVLLSNI 470
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF-------------------- 256
Y+ ++ V ++R LM E+ I K PG IE+D VHEF
Sbjct: 471 YALVGDYEGVAKVRNLMKEKGIVKEPGISTIEIDNKVHEFRAGDREHLKSKEIYTMLRKM 530
Query: 257 ---VKA-GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+K+ G+VPN + VL D++E EKE +L +H+E+LAI +GL+S PG ++I KNLRVC
Sbjct: 531 SERIKSHGYVPNTNTVLHDLEETEKERSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVC 590
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+DCHT T +ISK+ R+ V+ DRNRFHHF +GSCSC DFW
Sbjct: 591 SDCHTVTKLISKITGRKIVMRDRNRFHHFSDGSCSCDDFW 630
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 313 bits (802), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 171/399 (42%), Positives = 238/399 (59%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------ 54
+ E+ EEAL L+ E+ KG+ D T+VSLL AC +GAL +G H Y++K
Sbjct: 197 FAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRN 256
Query: 55 ---KNIEVDVGL-------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
N+ +D+ M K+ ++ T+LIV LA+ G G +A+E F M+
Sbjct: 257 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMES 316
Query: 99 R-GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+ G+ P ITFVG+L ACSH G+V E +F MSE+Y I P IEH+GC+V +L RAG++
Sbjct: 317 KEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQV 376
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA E I MPM + + LLGAC +H + + AE A ++L+L P++ G YV+LSN Y
Sbjct: 377 KKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMY 436
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
+S ++W V++IR+ M ++K PG L+EV VHEF+
Sbjct: 437 ASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEMT 496
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+VP S V D++EEEKE AL H+EK+AI F L+S IR++KNL+VC
Sbjct: 497 DRLRLEGYVPQISNVYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVKNLKVCA 556
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A ++SKVYNRE VV DR+RFHHFKNGSCSC+D+W
Sbjct: 557 DCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 24/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLT-GDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN--- 56
Y E A+ L+RE++ G D T LL A + + +G +H +++
Sbjct: 95 YAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVVIRSGFGS 154
Query: 57 -IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
I V L M KD++ ++I A G+ +AL + EM
Sbjct: 155 LIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMD 214
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
++G+KPD T V +L AC+ G + F++ K G+ ++ L+ + R GR+
Sbjct: 215 LKGIKPDGFTIVSLLSACAKIGALTLG-KRFHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 158 AKAEELIKNM 167
+A+ L M
Sbjct: 274 EEAKTLFDEM 283
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 163/399 (40%), Positives = 230/399 (57%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN---- 56
Y S EAL LFRE+Q + VTM+S++++C LGAL++G W+H Y+ KK
Sbjct: 206 YARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKY 265
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
++V+ L GM ++D +A+IV A G G KA+ F EM+
Sbjct: 266 VKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKR 325
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+PD ITF+G+L ACSHAGLV++ +F MS+ YGI P I+HYGC+V +LGRAG +
Sbjct: 326 EGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLD 385
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + + + + LL AC H N+E A+R +++ EL +GG YVILSN Y+
Sbjct: 386 EAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYA 445
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+W+ V +R+LM +R + K PGC +EV+ VVHEF
Sbjct: 446 RVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMK 505
Query: 260 -----GFVPNKSEVLF-DMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+VP+ S V DM+EE KE L H+EKLA+ FGL++ PG IR+ KNLR+C
Sbjct: 506 EIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLRICG 565
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A +IS ++ R+ V+ D RFH F++G CSC DFW
Sbjct: 566 DCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSCGDFW 604
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----KN 56
Y ++ A LF E+ GL D T SLL AC AL GM LH + +K N
Sbjct: 105 YARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHN 164
Query: 57 IEV------------DVGLGMALKD------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
I + D+ + D +++ A+I A Q N+AL F E+Q
Sbjct: 165 IYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQA 224
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
++P +T + V+++C+ G +D
Sbjct: 225 SNIEPTDVTMLSVIMSCALLGALD 248
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 166/392 (42%), Positives = 229/392 (58%), Gaps = 47/392 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+EAL LF+++Q + D++T+V +L AC GAL+ G ++H I K I D+ L AL
Sbjct: 296 QEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETAL 355
Query: 68 KD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D V T ALI LAM G G A+ F +M+ + PD
Sbjct: 356 VDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDD 415
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TF+ +L ACSHAGLVDE ++ F M K+ I P +EHYGC+V +L RA ++ A I+
Sbjct: 416 VTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIE 475
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
NMP+ + + LLGACR + + AE+ ++++EL PD+ G YV+LSN Y+ +W
Sbjct: 476 NMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDH 535
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------------KAG 260
++R+ M + I+K PGC IE++G++H+FV G
Sbjct: 536 ALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGG 595
Query: 261 FVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATN 320
VP + VLFD++EEEKE +L LH+EKLAI GL+S G IRI+KNLRVCNDCH+
Sbjct: 596 HVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLK 655
Query: 321 IISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ SKVYNRE V DR+RFHHFK GSCSC DFW
Sbjct: 656 VTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 687
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 110/224 (49%), Gaps = 27/224 (12%)
Query: 8 EEALLLFREVQH-KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMA 66
E+A L E+ L D+VTMVSL+ AC LG LE G +LH Y + ++ ++ + A
Sbjct: 194 EKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNA 253
Query: 67 L----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
+ KDV++ T+++ LA G +AL F +MQ+ ++ D
Sbjct: 254 ILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELD 313
Query: 105 AITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
IT VGVL AC+ G +D+ + +L+ +K+ I + LV + + G I A ++
Sbjct: 314 EITLVGVLSACAQTGALDQG-KYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVF 372
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLL--ELLPDN 206
+ M + + F L+G +H + E A Q+ +L+PD+
Sbjct: 373 RRMRVR-NVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDD 415
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 81/190 (42%), Gaps = 24/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y EA+ L+ + +G+ D T +L AC LGA+++G H ++K D
Sbjct: 86 YARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSD 145
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM-Q 97
+ + AL +DV+T +I G KA + EM +
Sbjct: 146 LFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTK 205
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+ ++PD +T V ++ AC+ G + ER + S++ G+ ++ ++ + + I
Sbjct: 206 LDNLRPDEVTMVSLVPACAQLGNL-ERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDI 264
Query: 158 AKAEELIKNM 167
A+E+ +
Sbjct: 265 ESAQEVFNRI 274
>gi|357141422|ref|XP_003572219.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Brachypodium distachyon]
Length = 571
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 232/398 (58%), Gaps = 50/398 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ L LFR++ + D+VT+++++ AC+HLGAL+ G W H Y +
Sbjct: 178 YLSQGLYTHVLRLFRQM----VATDEVTLLAVVSACSHLGALDTGRWAHAYHARTCRNTT 233
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG AL KDV T + +I LA+ G AL+ F EM+
Sbjct: 234 RNLGTALLNMYMRCGDVESAWSVFHEMLDKDVRTWSVMIAGLAVNGLPRDALKLFAEMKN 293
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV PD+IT VL ACSHAG+VDE + M +Y ++P+IEHYGC+V +LGRAG++
Sbjct: 294 IGVDPDSITMTAVLSACSHAGMVDEGKMFLHCMPIEYHLQPTIEHYGCVVDLLGRAGQLE 353
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A LI+ +P D + G LL ACR H N++ + AA ++L+L P + G+ V LSN Y+
Sbjct: 354 EALALIETVPFKADVALWGALLVACRAHKNVDMGQMAAMEILKLDPHHAGACVFLSNAYA 413
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
++ KW V+ +R M E I KPPG ++E+DGVV+EF+
Sbjct: 414 AAGKWDLVQEVRSSMKEHRIYKPPGSSIVELDGVVYEFLSGDHSHPQSDRIYAMLDEVCK 473
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G P+ EV FD+DEE+KE ++ H+EKLA+ GL+S G +IRI+KNLR+C D
Sbjct: 474 TLSLKGHRPSTKEVAFDIDEEDKEVCISQHSEKLALALGLISTRRGAVIRIVKNLRICED 533
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+ I+S+VY+R VV DRNRFHHFKNGSCSC D+W
Sbjct: 534 CHSVMKIVSEVYDRVIVVRDRNRFHHFKNGSCSCLDYW 571
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/391 (41%), Positives = 226/391 (57%), Gaps = 50/391 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EAL LFR + +G ++ T+VS+L ACT GALE G W+H ++ KK + D LG AL
Sbjct: 157 EALCLFRWMMEEGFVPNRGTVVSVLSACTGAGALETGKWVHVFVEKKRLRWDEFLGTALV 216
Query: 69 DVM----------------------TLTALIVVLAMCGQGNKALEYFYEMQIRG-VKPDA 105
D+ T A+I LAM G KAL+ F +M++ G V PD
Sbjct: 217 DMYAKCGAVELALEVFTGLRARNTCTWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDE 276
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TFVGVL+ACSHAG VD HF + +KYG+ +EHY C+V +L R+G + +A +LI
Sbjct: 277 VTFVGVLLACSHAGFVDAGKEHFYTIPQKYGVELILEHYACMVDLLARSGHLQEAHKLIT 336
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MPM D V LLG CR+H N++ AE + E+ G +V+LSN Y++ +W
Sbjct: 337 EMPMKPDVVVWRALLGGCRLHKNVKMAENV---ISEMEATCSGDHVLLSNLYAAVGRWNG 393
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GF 261
V+ +R M + I+K PGC +E+DG +HEF+ G+
Sbjct: 394 VEDVRRTMRSKGIEKIPGCSSVEMDGSIHEFISGDKSHPSYDDIHAKLIEIGGRMQQHGY 453
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
V +EV +D+++EEKE AL H+EKLAI FGL+ P IRI+KNLR C DCH+ +
Sbjct: 454 VTETAEVFYDIEDEEKEQALGYHSEKLAIAFGLIGGPPEATIRIVKNLRFCTDCHSFAKL 513
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+SK+Y+RE VV DR RFHHF+ G+CSC DFW
Sbjct: 514 VSKIYHREIVVRDRARFHHFRGGACSCNDFW 544
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 233/398 (58%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EAL L+RE+ + D +T+VS++ AC+ LGAL VG +H ++ IE+D
Sbjct: 95 YAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAEVHRFVESNRIELD 154
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ LG AL KDV T +++I+ LA G G+++L F +M
Sbjct: 155 LKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMIS 214
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KP+ +TFVGVL+AC+H GLV E +F M+E +GI P++EHYGC+V +LGR+G +
Sbjct: 215 EGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVE 274
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI++M D + LLGACRIH N+E AE A +L L P G YV+LSN Y+
Sbjct: 275 EARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLDPLGDGHYVLLSNIYA 334
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ W+ V +R+ + NI++ PG IE D +HEFV
Sbjct: 335 QANSWEGVAEMRKTIRRDNIQRIPGRSSIEWDEKIHEFVSGDRLHPRSKEIYRVLEEMMD 394
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+ P VL D+DE+ KE +L H+EKLAI F L++ IRI KNLR C D
Sbjct: 395 RLKQAGYKPMTGLVLQDIDEQSKERSLAEHSEKLAIAFALLTTPARSTIRITKNLRACED 454
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A +IS VY+R+ +V DRNRFHHF G CSCKD+W
Sbjct: 455 CHSAMKLISLVYDRKLIVRDRNRFHHFSEGQCSCKDYW 492
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Query: 48 LHPYIMKKNIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+H Y M+ + + ++ G +D + +++I A + +ALE + EM + PD
Sbjct: 61 IHGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDC 120
Query: 106 ITFVGVLVACSHAG--LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
IT V V+ ACS G V + F E I ++ L+ + + G I A+ +
Sbjct: 121 ITLVSVVSACSDLGALAVGAEVHRF---VESNRIELDLKLGTALIDMYAKCGDIESAQRV 177
Query: 164 IKNMP 168
MP
Sbjct: 178 FDRMP 182
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 163/392 (41%), Positives = 233/392 (59%), Gaps = 47/392 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+EA+ LFR +Q +G+ DK+T S+L +C+ L+ G +H ++ +DV L AL
Sbjct: 332 DEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSAL 391
Query: 68 ----------------------KDVMTLTALIV-VLAMCGQGNKALEYFYEMQIRGVKPD 104
++V+ TA+I A G+ +ALEYF +M+ +G+KPD
Sbjct: 392 VSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPD 451
Query: 105 AITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+TF VL AC+H GLV+E HF M YGI+P +EHY C V +LGRAG + +AE +I
Sbjct: 452 KVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVI 511
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWK 224
+MP V G LL ACR+H ++E ERAA+ +L+L PD+ G+YV LS+ Y+++ +++
Sbjct: 512 LSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYE 571
Query: 225 KVKRIRELMAERNIKKPPGCILIEVDGVVHEF------------------------VKAG 260
+++R++M +R++ K PG IEVDG VH F + G
Sbjct: 572 DAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMG 631
Query: 261 FVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATN 320
+VP+ VL D+DEE+KE L H+E+LAIT+GL+ PG+ IRI+KNLRVC DCHTAT
Sbjct: 632 YVPDTRFVLHDVDEEQKERILFSHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCHTATK 691
Query: 321 IISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISKV RE + D RFHHF +G CSC DFW
Sbjct: 692 FISKVVGREIIARDAQRFHHFADGVCSCGDFW 723
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 27/191 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + AL L +Q + +K+T S+L CT ALE G +H YI++ +
Sbjct: 224 YAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRE 283
Query: 61 V--------------GLGMALK--------DVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ GL A K DV+T TA++ A G ++A+ F MQ
Sbjct: 284 LWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQ 343
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE--RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+G+KPD +TF VL +CS + E RI H L+ Y + ++ LV + + G
Sbjct: 344 QGIKPDKMTFTSVLTSCSSPAFLQEGKRI-HQQLVHAGYNLDVYLQ--SALVSMYAKCGS 400
Query: 157 IAKAEELIKNM 167
+ A + M
Sbjct: 401 MDDASLVFNQM 411
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EA + ++ G DKVT VSLL A T+ L++G +H I++ +E++ +G +L
Sbjct: 131 EAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLV 190
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
K+V+T T LI A GQ + ALE MQ V P+ I
Sbjct: 191 GMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKI 250
Query: 107 TFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
TF +L C+ A L + H ++ YG + L+ + + G + +A +L
Sbjct: 251 TFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWV--VNSLITMYCKCGGLEEARKLFS 308
Query: 166 NMP 168
++P
Sbjct: 309 DLP 311
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 31/163 (19%)
Query: 32 LLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----------------------KD 69
LL C L +LE G +H I+K I+ + L L ++
Sbjct: 53 LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRN 112
Query: 70 VMTLTALIVVLAMCGQGNKALEYF--YE-MQIRGVKPDAITFVGVLVACSHAGLVD-ERI 125
+++ TA+I GNK LE F YE M++ G KPD +TFV +L A ++ L+ +
Sbjct: 113 IVSWTAMIEAFVA---GNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQK 169
Query: 126 SHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
H ++ + P + LV + + G I+KA + +P
Sbjct: 170 VHMEIVEAGLELEPRVG--TSLVGMYAKCGDISKARVIFDRLP 210
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 7 CEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVG 45
C EAL F +++ +G+ DKVT S+L ACTH+G +E G
Sbjct: 433 CREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEG 471
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 169/398 (42%), Positives = 227/398 (57%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ + E A+ LF+E+ T + VT+ ++L AC LG+L G W+H I +N+E +
Sbjct: 386 YTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPN 445
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL K+ +T +I + G G++AL+ + EM
Sbjct: 446 IYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLH 505
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G P A+TF+ VL ACSHAGLV E F+ M KY I P IEHY C+V ILGR+G++
Sbjct: 506 LGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLE 565
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
KA E IK MP+ V G LLGAC IH + + A A+++L EL P + G YV+LSN YS
Sbjct: 566 KALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYS 625
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
R + K IR+++ +R + K PGC LIEV+G H FV
Sbjct: 626 VERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTG 685
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ L D++EEEKE A+N+H+EKLAI FGL++ PG IRIIKNLRVC D
Sbjct: 686 KMREMGYQAETVPALHDVEEEEKELAVNVHSEKLAIAFGLITTEPGNEIRIIKNLRVCLD 745
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTAT ISK+ R VV D NRFHHFK+G CSC D+W
Sbjct: 746 CHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 783
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 76/190 (40%), Gaps = 25/190 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + E ++ LFRE+ G T+V L+ + G L + +H + +K I ++
Sbjct: 285 FTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILN 344
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ A K V+ A+I G A+ F EM
Sbjct: 345 PTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMK 404
Query: 99 RGVKPDAITFVGVLVACSHAG-LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
P+A+T +L AC+ G L + H + SE + P+I LV + + G I
Sbjct: 405 TEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSEN--LEPNIYVSTALVDMYAKCGNI 462
Query: 158 AKAEELIKNM 167
++A +L +M
Sbjct: 463 SEAWQLFDSM 472
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 13/118 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V++ ++++ LFRE+ G+ D T+ ++L A L L+VGM + +K
Sbjct: 185 VKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALK------- 237
Query: 62 GLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
+G D + LT LI + + CG N A F + +PD I + ++ + G
Sbjct: 238 -IGFGFCDYV-LTGLISLYSKCGDVNTARLLFRRIN----RPDLIAYNAMISGFTANG 289
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 164/399 (41%), Positives = 242/399 (60%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQH-KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ ++A+ +FRE++ + + + VT+VS+L A + LG+LE+G WLH Y I +
Sbjct: 242 YSQNGFFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRI 301
Query: 60 DVGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQ 97
D LG AL D V+T +A+I A+ GQ A++ F +M+
Sbjct: 302 DDVLGSALIDMYSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMR 361
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV+P + ++ +L ACSHAGLV+E +F+ M G+ P IEHYGC+V +LGR G +
Sbjct: 362 QAGVRPSDVAYINLLTACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLL 421
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+AEE I NMP+ D + LLGACR+H N+E +R A L++++P + G+YV LSN Y
Sbjct: 422 DEAEEFILNMPIKPDDVIWKALLGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMY 481
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------- 258
+S W +V +R M E +I+K PGC I++DGV+HEF+
Sbjct: 482 ASQGNWSEVSEMRLRMKEMDIRKDPGCSWIDIDGVLHEFLVEDDSHPRAKEINSMLVEIS 541
Query: 259 -----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
AG+ P ++VL +++EE+KE AL+ H+EK+A FGL+S PG IRI+KNLR+C
Sbjct: 542 DKLRLAGYRPITTQVLLNLEEEDKENALHYHSEKMATAFGLISTSPGKPIRIVKNLRICE 601
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH++ +ISKVY R+ V DR RFHHF++GSCSC D+W
Sbjct: 602 DCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 640
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 166/391 (42%), Positives = 234/391 (59%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL L++ + +G+ D TMVSLL AC L L +G H Y++K + ++ AL
Sbjct: 90 EALTLYKRMGSEGVEPDGFTMVSLLSACAELATLVLGRRAHVYMVKVGLNKNLHANNALL 149
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
++V++ T+LIV LA+ G G +ALE+F +M+ G+ P
Sbjct: 150 DLYAKCGTISEARKIFDEMGIERNVVSWTSLIVGLAVNGFGKEALEHFKDMEREGLVPSE 209
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
ITFVGVL ACSH G+V+E +F M E+Y I P IEHYGC+V +LGRAG + +A + I+
Sbjct: 210 ITFVGVLYACSHCGIVNEGFEYFKRMKEQYDIVPRIEHYGCMVDLLGRAGLLKEAYDYIQ 269
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MP+ + + LLGAC IH +L A +LL+L P + G YV+LSN Y+S ++W
Sbjct: 270 DMPLQPNAVIWRTLLGACTIHGHLGLGAFARARLLQLEPKDSGDYVLLSNLYASEQRWSD 329
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------------AGF 261
V +R M ++K PG L+E+ VHEFV AG+
Sbjct: 330 VHEVRRTMLSEGVRKTPGYSLVELGNHVHEFVMGDRTHPQSEAIYKMLVEMAMKLKLAGY 389
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ + VL D++EEEKE+AL H+EK+AI F L++ +PG IRIIKNLRVC DCH A +
Sbjct: 390 VPHTANVLADIEEEEKESALFYHSEKIAIAFMLINTLPGTPIRIIKNLRVCADCHFAIKL 449
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISKV+ R+ VV D +RFHHF++GSCSC+D+W
Sbjct: 450 ISKVFERDIVVRDCSRFHHFRDGSCSCRDYW 480
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSH-AGLVDE 123
M KD++ ++I A+ G+ N+AL + M GV+PD T V +L AC+ A LV
Sbjct: 67 MPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAELATLVLG 126
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
R +H ++ K G+ ++ L+ + + G I++A ++ M
Sbjct: 127 RRAHVYMV--KVGLNKNLHANNALLDLYAKCGTISEARKIFDEM 168
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 310 bits (795), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 163/398 (40%), Positives = 226/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ + A+ ++Q + + +K + VSLL AC+ ALE G +H I+K+ ++ D
Sbjct: 709 YAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGD 768
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL K+V+T A+I A G +KAL +F M+
Sbjct: 769 VRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEK 828
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD TF +L AC+HAGLV E F+ M +YG+ P+IEHYGCLV +LGRA R
Sbjct: 829 EGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQ 888
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE LI MP D V LLGACRIH N+ AE AA L+L N Y++LSN Y+
Sbjct: 889 EAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYA 948
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ +W V +IR +M R I+K PG IEVD ++HEF+
Sbjct: 949 AAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSV 1008
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+ P+ VL D+ + +ET+L H+E+LAI +GL+ PG IRI KNLR+C D
Sbjct: 1009 EMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGD 1068
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA+ ISK+ RE + D NRFH FKNG CSC+D+W
Sbjct: 1069 CHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 1106
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 127/265 (47%), Gaps = 31/265 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + + E A LF+E+Q++ L D +T S+L C + ALE+G +H I + +++D
Sbjct: 507 HAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLD 566
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL +DVM+ TA+I A G+ KA+E F++MQ
Sbjct: 567 VNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQN 626
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE--RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
G +P TF +L C+ + +DE ++ + +++ Y + + + L+ ++G
Sbjct: 627 EGFRPVKSTFSSILKVCTSSACLDEGKKVIAY-ILNSGYELDTGVGN--ALISAYSKSGS 683
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE--LLPDNGGSYVILS 214
+ A E+ MP + D ++ + + A A Q+ E ++P N S+V L
Sbjct: 684 MTDAREVFDKMP-SRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVP-NKFSFVSLL 741
Query: 215 NRYSSSRKWKKVKRIRELMAERNIK 239
N SS ++ KR+ + +R ++
Sbjct: 742 NACSSFSALEEGKRVHAEIVKRKLQ 766
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 25/191 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + +E L LF ++ +G++ DKVT ++LL A T L+ G +H +++ + D
Sbjct: 204 YAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSD 263
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL +DV+ ALI LA G +A E +Y M+
Sbjct: 264 IRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRS 323
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV + T++ +L ACS + ++ ++ H ++ + G ++ L+ + R G +
Sbjct: 324 DGVALNRTTYLSILNACSTSKALEAGKLIHSHISED--GHSSDVQIGNALISMYARCGDL 381
Query: 158 AKAEELIKNMP 168
KA EL MP
Sbjct: 382 PKARELFYTMP 392
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 130/300 (43%), Gaps = 31/300 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + ++A LF E+Q+ G +K+T +S+L AC LE G +H I+K + D
Sbjct: 103 YAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRD 162
Query: 61 ----------------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V G++ +DV++ ++ + A + L F +M
Sbjct: 163 PRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSS 222
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD +T++ +L A + ++DE L E+ G+ I LV + R G +
Sbjct: 223 EGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE-GLNSDIRVGTALVTMCVRCGDVD 281
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHD-NLEAAERAAQQLLELLPDNGGSYVILSNRY 217
A++ K D V L+ A H N+EA E+ + + + N +Y+ + N
Sbjct: 282 SAKQAFKGTA-DRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNAC 340
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEV-DGVVHEFVKAGFVPNKSEVLFDMDEEE 276
S+S+ + K I ++E +++ + ++ + + G +P E+ + M + +
Sbjct: 341 STSKALEAGKLIHSHISEDGHSSD-----VQIGNALISMYARCGDLPKARELFYTMPKRD 395
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 22/131 (16%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EA+ L++++Q +G+ +VT + LL AC + A G +H I++ I+ + L AL
Sbjct: 414 EAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALM 473
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+DV++ ++I A G A + F EMQ ++PD I
Sbjct: 474 NMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNI 533
Query: 107 TFVGVLVACSH 117
TF VL C +
Sbjct: 534 TFASVLSGCKN 544
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 25/170 (14%)
Query: 18 QHKGLTGDKVTMVSLLLACTH---------LGALEVGMWLHPYIMKKNIEVDVGLG---- 64
Q + ++ T V+LL CT + A V W+ P I N+ +++ +
Sbjct: 19 QPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSV 78
Query: 65 ---------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC 115
M +DV++ +LI A G KA + F EMQ G P+ IT++ +L AC
Sbjct: 79 LDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTAC 138
Query: 116 -SHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
S A L + + H ++ Y P +++ L+ + G+ G + +A ++
Sbjct: 139 YSPAELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVF 186
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 310 bits (793), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 162/391 (41%), Positives = 237/391 (60%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKG-LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV------ 61
E L +F E+ +G ++ +VS+L ACTHLGAL++G H +++ E++V
Sbjct: 169 ECLSVFGEMSREGSCRPEESILVSVLSACTHLGALDLGRCTHVTLLRNIREMNVIVQTSL 228
Query: 62 ------------GLG----MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
GL M K+ ++ + +I LAM G+G +AL+ F +M G+KPD
Sbjct: 229 IDMYVKCGCIEKGLSLFQRMVKKNQLSYSVMITGLAMHGRGMEALQVFSDMLEEGLKPDD 288
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+ ++GVL AC+HAGLVDE + FN M ++GI P+I+HYGC+V+++GRAG + KA E I+
Sbjct: 289 VVYLGVLSACNHAGLVDEGLQCFNRMKLEHGIEPTIQHYGCIVHLMGRAGMLNKALEHIR 348
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MP+ + V GLL AC+ H NLE E AA+ L EL N G YV+LSN Y+ +++W+
Sbjct: 349 SMPIKPNEVVWRGLLSACKFHHNLEIGEIAAKSLGELNSSNPGDYVVLSNMYARAKRWED 408
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GF 261
V +IR MA + + PG L++V+ +++FV G+
Sbjct: 409 VAKIRTEMARKGFTQTPGFSLVQVERKIYKFVSQDMSHPQCKGMYEMIHQMEWQLKFEGY 468
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P+ S+VLFD+DEEEK L H++KLA+ F L+ G IRI +NLR+CNDCHT T +
Sbjct: 469 SPDTSQVLFDVDEEEKRQRLKAHSQKLAMAFALIHTSQGAPIRIARNLRMCNDCHTYTKL 528
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS +Y RE V DRNRFHHFK+G+CSC+D+W
Sbjct: 529 ISVIYQREITVRDRNRFHHFKDGTCSCRDYW 559
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 24/155 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV E AL L+ E+ +G+ D T +L AC L ++E GM +H YI K+ +E D
Sbjct: 60 YVNVMNMENALFLYYEMLERGVESDNFTYPALFKACASLRSIEEGMQIHGYIFKRGLEGD 119
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + +L +DV + +A+I A G ++ L F EM
Sbjct: 120 LFVQNSLINMYGKCGKIELSCSVFEHMDRRDVASWSAIIAAHASLGMWSECLSVFGEMSR 179
Query: 99 RG-VKPDAITFVGVLVACSHAGLVD-ERISHFNLM 131
G +P+ V VL AC+H G +D R +H L+
Sbjct: 180 EGSCRPEESILVSVLSACTHLGALDLGRCTHVTLL 214
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/398 (42%), Positives = 229/398 (57%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EAL LF ++ ++GL D MV +L +C LGALE+G W I +
Sbjct: 285 YASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDN 344
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG AL KD + A I LAM G AL F +M+
Sbjct: 345 SVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEK 404
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD TFVG+L AC+HAGLV+E +FN M + + P IEHYGC+V +LGRAG +
Sbjct: 405 SGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLD 464
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LIK+MPM + V G LLG CR+H + + E ++L+ L P + G+YV+LSN Y+
Sbjct: 465 EAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYA 524
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+S KW++ +IR +M+ER +KK PG IEVDGVVH+F+
Sbjct: 525 ASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAK 584
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VP VLFD++EEEKE + H+EKLA+ FGL+S P I ++KNLRVC D
Sbjct: 585 DLKAAGYVPTTDHVLFDIEEEEKEHFIGCHSEKLAVAFGLISTAPNDKILVVKNLRVCGD 644
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A IS++ RE +V D NRFH F +G CSCKD+W
Sbjct: 645 CHEAIKHISRIAGREIIVRDNNRFHCFTDGLCSCKDYW 682
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 23/189 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI----MKKN 56
YV C EA+ +FR + GL D ++V +L AC G L G W+ YI M +N
Sbjct: 184 YVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRN 243
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ V L GM K++++ +++I A G +AL+ F++M
Sbjct: 244 VFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLN 303
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD VGVL +C+ G ++ NL++ + S+ L+ + + GR+
Sbjct: 304 EGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTA-LIDMYAKCGRMD 362
Query: 159 KAEELIKNM 167
+A E+ + M
Sbjct: 363 RAWEVFRGM 371
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 80/188 (42%), Gaps = 35/188 (18%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+E++ ++ ++ +GL+ D T +L AC + E+G+ +H ++K E D + ++L
Sbjct: 90 QESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISL 149
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
K+ + TA I G+ +A++ F + G++PD+
Sbjct: 150 INLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDS 209
Query: 106 ITFVGVLVACSHAG------LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
+ V VL AC G +DE I+ ++ + ++ Y G+ G + +
Sbjct: 210 FSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFY-------GKCGNMER 262
Query: 160 AEELIKNM 167
A + M
Sbjct: 263 ARSVFDGM 270
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 168/399 (42%), Positives = 236/399 (59%), Gaps = 48/399 (12%)
Query: 1 YVEDSACEEALLLFREVQH-KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ EA+ ++R ++ + + ++ T VS+L A H+GAL+ GM +H +++K N+ +
Sbjct: 451 YTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHL 510
Query: 60 DVGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQ 97
DV +G L D+ + A+I + G G KAL+ F EMQ
Sbjct: 511 DVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQ 570
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GVKPD +TF+ +L ACSH+GLVDE F+LM E YGI+PS++HYGC+V +LGRAG +
Sbjct: 571 DEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQE-YGIKPSLKHYGCMVDLLGRAGFL 629
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
A + IK+MP+ D + G LLGACRIH N+E + A+ +L E+ +N G YV+LSN Y
Sbjct: 630 EMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIY 689
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
++ KW+ V ++R L ER +KK PG IEV+ V F
Sbjct: 690 ANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILT 749
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G++P+ S VL D++E+EKE L H+E+LAI FG++S P IRI KNLRVC
Sbjct: 750 AKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCG 809
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH AT IS++ RE VV D RFHHFKNG CSC D+W
Sbjct: 810 DCHNATKFISRITEREIVVRDSKRFHHFKNGICSCGDYW 848
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 22/132 (16%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
+++ +AL + E++ +G+ D VT+ S+L C LG + +H Y++K +E ++
Sbjct: 249 IQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFEL 308
Query: 62 --------------GLG--------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
LG M L+DV++ ++I A +F++MQ+
Sbjct: 309 FVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLN 368
Query: 100 GVKPDAITFVGV 111
G++PD +T V +
Sbjct: 369 GLEPDLLTLVSL 380
>gi|414885893|tpg|DAA61907.1| TPA: hypothetical protein ZEAMMB73_945776 [Zea mays]
Length = 584
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 161/394 (40%), Positives = 228/394 (57%), Gaps = 49/394 (12%)
Query: 8 EEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMA 66
+EA+ +FRE + + D+VT+VS++ A +LGAL G+W H Y+ +K IEV+ L A
Sbjct: 191 DEAIAVFREMLASQECQPDRVTLVSVVSAIAYLGALAHGLWAHAYVFRKCIEVEEKLSSA 250
Query: 67 L-----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
L + + T A++ G +ALE F M+ + P
Sbjct: 251 LINMYSKCGFIEGAVYVFDNVGGKRSLDTWNAMLAGFTANGYSERALELFTRMESTRLMP 310
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
+ ITF VL ACSH GLV+E + +F MS YGI P I HYGC+V + RAG KAEE+
Sbjct: 311 NKITFNTVLNACSHGGLVEEGMKYFQRMSRFYGIEPDIAHYGCMVDLFCRAGMFEKAEEI 370
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
I+ MPM D +L LLGACR H NLE ++ +L+E ++ YV+LSN Y+ W
Sbjct: 371 IQTMPMEPDASMLKALLGACRTHKNLELGKKVGHRLIEAAANDHAGYVLLSNIYALDGNW 430
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KA 259
V ++R+LM +R + K PG +E++GV+HEF+ +
Sbjct: 431 GGVHKVRKLMLDRGVLKTPGSSSVELNGVIHEFISGDKSHSRKRDIYKMLGEICQQLKSS 490
Query: 260 GFVPNKSEVLFDMDEEE-KETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTA 318
G+ P+ S+VL D+D+E+ KE++L LH+EKLAI FGL+S PG IR++ NLR+C DCH A
Sbjct: 491 GYTPDTSQVLLDIDDEDVKESSLALHSEKLAIAFGLISTAPGTPIRVVNNLRICGDCHNA 550
Query: 319 TNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ISK+Y R +V D NRFHHF+ GSCSC D+W
Sbjct: 551 IKLISKIYGRCIIVRDANRFHHFRKGSCSCGDYW 584
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 160/396 (40%), Positives = 229/396 (57%), Gaps = 47/396 (11%)
Query: 4 DSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL 63
+S EAL LFRE+Q GL VTM+ L +C LGAL++G W+H Y+ K + V +
Sbjct: 214 NSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKV 273
Query: 64 GMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV 101
AL +D +A+IV A G G++A+ EM+ V
Sbjct: 274 NTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKV 333
Query: 102 KPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAE 161
+PD ITF+G+L ACSH GLV+E +F+ M+ +YGI PSI+HYGC++ +LGRAGR+ +A
Sbjct: 334 QPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEAC 393
Query: 162 ELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSR 221
+ I +P+ + LL +C H N+E A+ Q++ EL +GG YVILSN + +
Sbjct: 394 KFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYVILSNLCARNG 453
Query: 222 KWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK----------------------- 258
+W V +R++M ++ K PGC IEV+ VVHEF
Sbjct: 454 RWDDVNHLRKMMVDKGALKVPGCSSIEVNNVVHEFFSGDGVHSTSTILHHALDELVKELK 513
Query: 259 -AGFVPNKSEVLF-DMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCH 316
AG+VP+ S V + D+++EEKE L H+EKLAIT+GL++ PG IR++KNLRVC DCH
Sbjct: 514 LAGYVPDTSLVFYADIEDEEKEIVLRYHSEKLAITYGLLNTPPGTTIRVVKNLRVCVDCH 573
Query: 317 TATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
A IS ++ R+ ++ D RFHHFK+G CSC D+W
Sbjct: 574 NAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 609
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 80/182 (43%), Gaps = 25/182 (13%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----KNIEV------ 59
A+LL +V GL D T SLL AC L ALE G LH +K N+ V
Sbjct: 119 AILLCSQVLCSGLLPDDYTFSSLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLIN 178
Query: 60 ------DVGLGMALKD------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
DV + D V+ A+I A + N+AL F E+Q G+KP +T
Sbjct: 179 MYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVT 238
Query: 108 FVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
+ L +C+ G +D R H + +K G ++ L+ + + G + A + K+
Sbjct: 239 MLVALSSCALLGALDLGRWIHEYV--KKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKD 296
Query: 167 MP 168
MP
Sbjct: 297 MP 298
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/401 (41%), Positives = 235/401 (58%), Gaps = 49/401 (12%)
Query: 1 YVEDSACEEALLLFREVQ-HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y+++ EA+ ++ ++ H+GL + T VS+L A ++LG L+ GM +H +K + +
Sbjct: 346 YMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNL 405
Query: 60 DVGLGMALKDVMT----------------------LTALIVVLAMCGQGNKALEYFYEMQ 97
DV + L D+ A+I L + G G KAL F +MQ
Sbjct: 406 DVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQ 465
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+KPD +TFV +L ACSHAGLVD+ S F+LM YGI P +HY C+V +LGRAG++
Sbjct: 466 QEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQL 525
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A E I++MP+ D V G LLGACRIH N+E + A+Q L EL P+N G YV++SN Y
Sbjct: 526 DEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMY 585
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVV--------------HEFVK----- 258
+ KW V +R L+ +N++K PG +EV G V HE ++
Sbjct: 586 AKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHD 645
Query: 259 -------AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
AG+VP+ S VL D++E+EKE LN H+E+LAI FG+++ PG + I KNLRV
Sbjct: 646 LLAKMKSAGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPGTPLHIYKNLRV 705
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH+AT ISK+ RE +V D NRFHHFK+G CSC DFW
Sbjct: 706 CGDCHSATKYISKITEREIIVRDANRFHHFKDGHCSCGDFW 746
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 28/190 (14%)
Query: 4 DSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK-------- 55
++ +A+ L + +G+ GD VT+ S+L C LG + + +H Y +K
Sbjct: 146 NTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFV 205
Query: 56 -NIEVDV----GL---------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV 101
N +DV G+ GMAL+D++T ++I G+ A+E F+ M GV
Sbjct: 206 CNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGV 265
Query: 102 KPDAITFVGVLVACSHAGLVDE---RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
PD +T V + A + G DE + H + + + I +V + + +I
Sbjct: 266 CPDVLTLVSLASAVAQCG--DELGAKSVHCYVRRRGWDVGDIIAG-NAMVDMYAKMSKID 322
Query: 159 KAEELIKNMP 168
A+++ N+P
Sbjct: 323 AAQKVFDNLP 332
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 25/183 (13%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV-DVGLGMAL- 67
A+ LF + G+ D +T+VSL A G +H Y+ ++ +V D+ G A+
Sbjct: 253 AVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMV 312
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI-RGVKPDA 105
+DV++ LI G N+A+ + +M G+KP
Sbjct: 313 DMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQ 372
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
TFV VL A S+ G + + + + +S K G+ + CL+ + + G++ +A L +
Sbjct: 373 GTFVSVLPAYSYLGGLQQGM-RMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFE 431
Query: 166 NMP 168
+MP
Sbjct: 432 HMP 434
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 161/396 (40%), Positives = 226/396 (57%), Gaps = 47/396 (11%)
Query: 4 DSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE----- 58
++ EAL LFRE+Q GL VTM+ +L +C LG+L++G W+H Y+ K +
Sbjct: 191 NNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKV 250
Query: 59 -----------------VDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV 101
V+V M +D +A+IV A G G +A+ EM+ V
Sbjct: 251 NTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKV 310
Query: 102 KPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAE 161
+PD ITF+G+L ACSH GLV+E +F+ M+ +YGI PSI+HYGC+V +LGRAGR+ +A
Sbjct: 311 QPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAY 370
Query: 162 ELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSR 221
+ I +P+ + LL AC H N+E +R +++ EL +GG YVI SN +
Sbjct: 371 KFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYG 430
Query: 222 KWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------ 257
KW V +R+ M ++ K PGC IEV+ VVHEF
Sbjct: 431 KWDDVNHLRKTMIDKGAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKELK 490
Query: 258 KAGFVPNKSEVLF-DMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCH 316
AG+VP+ S V + DM++EEKE L H+EKLAITFGL++ PG IR++KNLRVC DCH
Sbjct: 491 SAGYVPDTSLVFYADMEDEEKEIILRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCH 550
Query: 317 TATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
A IS ++ R+ ++ D RFHHFK+G CSC D+W
Sbjct: 551 NAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 586
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 70 VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD-ERISHF 128
V+ A+I+ LA + N+AL F E+Q G+KP +T + VL +C+ G +D R H
Sbjct: 178 VVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHE 237
Query: 129 NLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
+ +KYG ++ L+ + + G + A + ++MP
Sbjct: 238 YV--KKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMP 275
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 171/383 (44%), Positives = 229/383 (59%), Gaps = 46/383 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL LFRE+ +G+ D TMVSLL AC LGAL +G H Y++K ++ +
Sbjct: 71 YALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGN 130
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ G AL K V++ T+LIV LA+ G G +ALE F E++
Sbjct: 131 LHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELER 190
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+G+ P ITFVGVL ACSH G+VDE +F M E+YGI P IEHYGC+V +LGRAG +
Sbjct: 191 KGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVK 250
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E I+NMPM + V LLGAC IH +L E A QLL+L P + G YV+LSN Y+
Sbjct: 251 QAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYA 310
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
S ++W V ++R M +KK PG L+E+ +HEFV
Sbjct: 311 SEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITK 370
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VP+ S VL D++EEEKETAL+ H+EK+AI F L++ G+ IR++KNLRVC D
Sbjct: 371 LLKLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCAD 430
Query: 315 CHTATNIISKVYNRETVVMDRNR 337
CH A +ISKV++RE VV DR+R
Sbjct: 431 CHLAIKLISKVFDREIVVRDRSR 453
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG-LVDE 123
MA ++++T ++I A+ G+ N+AL F EM +RGV+PD T V +L AC+ G L
Sbjct: 56 MAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALG 115
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
R +H ++ K G+ ++ L+ + + G I +A ++ M
Sbjct: 116 RRAHVYMV--KVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEM 157
>gi|326506208|dbj|BAJ86422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 582
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 162/394 (41%), Positives = 224/394 (56%), Gaps = 49/394 (12%)
Query: 8 EEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMA 66
EEA+ +FRE + D+VT+VS++ A +LGAL G+W H Y+ +K IEVD L A
Sbjct: 189 EEAVAVFREMLASNECQPDRVTLVSVISAIAYLGALAQGLWAHAYVCRKEIEVDEKLSSA 248
Query: 67 L-----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
L + V T A++ G +ALE F M+ G P
Sbjct: 249 LINMYSKCGFIEGAVYVFENSCALRSVDTWNAMLAGFTASGCSERALELFTRMESSGFVP 308
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
+ ITF +L ACSH G V+E I +F M+ I P I HYGC+V + RAG KAEE+
Sbjct: 309 NKITFNTLLNACSHGGFVEEGIGYFERMTNSSSIEPDIAHYGCMVDLFCRAGLFEKAEEM 368
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
I+ MPM D V L+GACR + N E ++A +L+E P++ YV+LSN Y+ W
Sbjct: 369 IQMMPMEPDAAVWKALVGACRTYSNFELGKKAGHRLIEAAPNDHAGYVLLSNIYALDGNW 428
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------------A 259
K V ++R+LM ++K PG IE+DGV+HEF+ A
Sbjct: 429 KGVYKVRKLMLNCGVQKVPGSSSIELDGVIHEFISGDKSHSRKRDVYEMLSEICQQLKVA 488
Query: 260 GFVPNKSEVLFDMDEEE-KETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTA 318
G+ P+ S+VL D+D+E+ KE++L LH+E+LA+ FGL+S PG IRI+KNLRVC DCH A
Sbjct: 489 GYAPDTSQVLLDIDDEDVKESSLALHSERLALAFGLISTAPGTPIRIVKNLRVCGDCHNA 548
Query: 319 TNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
++SK+Y R +V D NRFH F+ GSCSC D+W
Sbjct: 549 IKLLSKIYGRCIMVRDANRFHRFREGSCSCGDYW 582
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/398 (42%), Positives = 221/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + E A+ LF+E+ T + VT+ S+L AC LGAL G +H I KN+E +
Sbjct: 381 YAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQN 440
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL K+ +T +I + G G++AL+ F EM
Sbjct: 441 IYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLH 500
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G +P ++TF+ VL ACSHAGLV E F+ M KY I P EHY C+V ILGRAG++
Sbjct: 501 LGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLE 560
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
KA E I+ MP+ V G LLGAC IH + A A+++L EL P N G YV+LSN YS
Sbjct: 561 KALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLSNIYS 620
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
R + K +RE + +RN+ K PGC LIEV+G H FV
Sbjct: 621 VERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQTTSIYAKLEELTG 680
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G+ L D++EEEKE N+H+EKLAI FGL++ PG IRIIKNLRVC D
Sbjct: 681 KMREMGYQSETVTALHDVEEEEKELMFNVHSEKLAIAFGLITTEPGTEIRIIKNLRVCLD 740
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT ISK+ R VV D NRFHHFK+G CSC D+W
Sbjct: 741 CHAATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 778
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 66/179 (36%), Gaps = 23/179 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E A+ FRE+ G TMV L+ + G L + + + +K + + AL
Sbjct: 287 ECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTAL 346
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
K V A+I A G A+ F EM P+
Sbjct: 347 TTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNP 406
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+T +L AC+ G + S L+ K + +I L+ + + G I++A +L
Sbjct: 407 VTITSILSACAQLGALSFGKSVHQLIKSK-NLEQNIYVSTALIDMYAKCGNISEASQLF 464
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 160/400 (40%), Positives = 228/400 (57%), Gaps = 49/400 (12%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
VE EAL L E+Q+ G D V + SLL AC +LGAL+ G WLH Y++ ++VD
Sbjct: 196 VEAGQSVEALSLCYEMQNAGFELDGVAIASLLTACANLGALDQGRWLHFYVLNNGVDVDR 255
Query: 62 GLGMAL------------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+G AL KDV TA+I A+ G+G +ALE+F M+
Sbjct: 256 VIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDGFAIHGRGVEALEWFNRMR 315
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G++P++ITF VL ACS+ GLV+E F M Y + PSIEHYGC+V +LGR+GR+
Sbjct: 316 REGIRPNSITFTAVLRACSYGGLVEEGKELFKSMKCFYNVNPSIEHYGCMVDLLGRSGRL 375
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A+ELIK MPM + G LL AC IH + + L+E+ D+ G Y+ L+
Sbjct: 376 DEAKELIKKMPMKPSAVIWGALLKACWIHRDFLLGSQVGAHLVEVDSDHSGRYIQLATIL 435
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
++ KWK+ +R M + PG + ++G+VHEF+
Sbjct: 436 AAEGKWKEAAEVRLKMKSLGVPISPGKSSVTLNGIVHEFLAGHQDHPQMEQIQLKLKQIA 495
Query: 260 -------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
G+ P ++L D++ EEKETA+ H+EKLAI FGL++ PG IR+IKNLR+C
Sbjct: 496 ERLRQDEGYEPATKDLLLDLENEEKETAMAQHSEKLAIAFGLINTKPGTTIRVIKNLRIC 555
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHT ++S++Y+RE ++ DR RFHHF++GSCSCKD+W
Sbjct: 556 RDCHTVAKLVSQIYSREIIMRDRVRFHHFRDGSCSCKDYW 595
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 51 YIMKKNIEVDVG--LGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITF 108
YI +++ G L M LK+V++ T+LI L GQ +AL YEMQ G + D +
Sbjct: 164 YIKSGDVKTAYGVFLDMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAI 223
Query: 109 VGVLVACSHAGLVDE-RISHFNLMS 132
+L AC++ G +D+ R HF +++
Sbjct: 224 ASLLTACANLGALDQGRWLHFYVLN 248
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 166/389 (42%), Positives = 231/389 (59%), Gaps = 52/389 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EALLLF+E+ G T + VTM+S+L AC HLGA+++G W+H YI KK V
Sbjct: 283 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVV 342
Query: 61 VGLGMALKDVM---------------------------TLTALIVVLAMCGQGNKALEYF 93
V +L+ + T A+I AM G+ N A + F
Sbjct: 343 VTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIF 402
Query: 94 YEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGR 153
M+ G++PD ITFVG+L ACSH+G++D + F M + Y I P +EHYGC++ +LG
Sbjct: 403 SRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGH 462
Query: 154 AGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVIL 213
+G +AEE+I MPM D + LL AC+IH NLE E A++L+++ P+N GSYV+L
Sbjct: 463 SGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLL 522
Query: 214 SNRYSSSRKWKKVKRIRELMAERNIKKP-PGCILIEVDGVVHEFV--------------- 257
SN Y+++ KW +V +IR L+ ++ +KK PGC IE+D VVHEF+
Sbjct: 523 SNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGM 582
Query: 258 ---------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKN 308
+AGFVP+ SEVL +M+EE KE AL H+EKLAI FGL+S PG + I+KN
Sbjct: 583 LEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKN 642
Query: 309 LRVCNDCHTATNIISKVYNRETVVMDRNR 337
LRVC +CH AT +ISK+Y RE + DR R
Sbjct: 643 LRVCRNCHEATKLISKIYKREIIARDRTR 671
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI----MKKN 56
Y E ++AL LF+E+ + D+ TM +++ AC G++E+G +H +I N
Sbjct: 182 YAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSN 241
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+++ L G++ KDV++ LI +AL F EM
Sbjct: 242 LKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 301
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
G P+ +T + +L AC+H G +D
Sbjct: 302 SGETPNDVTMLSILPACAHLGAID 325
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 18/167 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ E+A +F H+ D V+ +L+ G +E + I
Sbjct: 120 YAQNGRLEDAQKVFDRSSHR----DVVSYTALITGYASRGYIESAQKMFDEI-------- 167
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+KDV++ A+I A G KALE F EM VKPD T V+ AC+ +G
Sbjct: 168 -----PIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGS 222
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ E + +G +++ L+ + + G + A EL++ +
Sbjct: 223 I-ELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGL 268
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 157/398 (39%), Positives = 237/398 (59%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ ++ E+AL +F + +G+ + +T+VS LLACT +GAL+VG +H Y+ +++
Sbjct: 280 FSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLN 339
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
G+G AL KD++T + +I A+ G ++AL+ F +M+
Sbjct: 340 RGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKS 399
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD + F+ +L ACSH+G VD+ ++ F M Y I P+++HY +V +LGRAGR+
Sbjct: 400 AGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLD 459
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A I++MP+ D + G L ACR H N+E AE A++LL+L P + GSYV LSN Y+
Sbjct: 460 EALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYA 519
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ +W+ V+R+R LM R ++K PG IEV+G VH FV
Sbjct: 520 AVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITA 579
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G++P + VL +++EEEKE AL H+EKLA+ FGL+S PG IRI+KNLRVC D
Sbjct: 580 SAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGD 639
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+ SK+ RE ++ D RFHHFK+G+CSC D+W
Sbjct: 640 CHSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDYW 677
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL--VD 122
M K+V++ T +I + G KAL F+ M GV+P+ +T V L+AC+ G V
Sbjct: 265 MPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVG 324
Query: 123 ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
ERI ++ L S + + I LV + + G I A +
Sbjct: 325 ERIHNY-LSSNGFQLNRGIG--TALVDMYAKCGNIKSASRVF 363
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 169/398 (42%), Positives = 225/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YVE+ E+ L LFR + G+ + +++ S+LL C++L AL++G +H + K + D
Sbjct: 238 YVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSD 297
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
G +L KDV+ A+I A G G KAL F EM+
Sbjct: 298 TTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKK 357
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD ITFV VL+AC+HAGLVD + +FN M +GI EHY C+V +LGRAG+++
Sbjct: 358 EGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLS 417
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LIK+MP + G LLGACRIH NL AE AA+ LLEL P YV L+N Y+
Sbjct: 418 EAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYA 477
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
+ +W V IR M + N+ K PG IE++ VVH F
Sbjct: 478 AQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHEKLKDLEK 537
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VP+ VL D+ EE KE L H+EKLAI FGL+ GV IR+ KNLRVC D
Sbjct: 538 KMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVPLGVPIRVFKNLRVCGD 597
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+AT IS + RE +V D RFHHFK+G CSC+D+W
Sbjct: 598 CHSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDYW 635
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 167/394 (42%), Positives = 230/394 (58%), Gaps = 53/394 (13%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK-------------- 54
E L +F E+ D T+VS+L AC GAL +G +H Y+ K
Sbjct: 890 EVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALI 949
Query: 55 ------------KNIEVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVK 102
+ I ++GLG + V++ T+LIV LA G G +ALE F M+ +
Sbjct: 950 DLYAKCGSVNDARRIFEEMGLG---RTVVSWTSLIVGLAANGFGKEALELFSLMEREKLV 1006
Query: 103 PDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE 162
P IT VGVL ACSH GLVD+ +F+ M E YGI P IEH GC+V +LGRAGR+ +A +
Sbjct: 1007 PTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYD 1066
Query: 163 LIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRK 222
I MP+ + V LLG+C +H LE + A ++L+EL P + G YV+LSN Y++
Sbjct: 1067 YIITMPLEPNAVVWRTLLGSCAMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGM 1126
Query: 223 WKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------K 258
W V +R+ M + ++K PG L+E+ V+EFV +
Sbjct: 1127 WADVHVLRKTMVKDRVRKNPGHSLVELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRR 1186
Query: 259 AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTA 318
G++P S VL D++EEEKETALN H+E+LAI F L+ +PG+ IRIIKNLR+C DCH A
Sbjct: 1187 EGYIPRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVA 1246
Query: 319 TNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
N+ISKVY+RE +V DR+RFHHF+ G+CSCKD+W
Sbjct: 1247 FNLISKVYDREIIVRDRSRFHHFQGGACSCKDYW 1280
>gi|226507132|ref|NP_001145890.1| uncharacterized protein LOC100279406 [Zea mays]
gi|219884839|gb|ACL52794.1| unknown [Zea mays]
Length = 318
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 149/313 (47%), Positives = 197/313 (62%), Gaps = 24/313 (7%)
Query: 64 GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE 123
GM + +++ T++I LAM G+G +A+ F EM+ GV+PD + F+GVL ACSHAG+VDE
Sbjct: 6 GMKERTIVSWTSVIDALAMEGRGKEAVAVFEEMKTAGVRPDDVAFIGVLTACSHAGMVDE 65
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGAC 183
+F M YGI P IEHYGC+V + GRAG + +A E + MPM + + L+ AC
Sbjct: 66 GYGYFESMRMAYGIDPKIEHYGCMVDMFGRAGMVERAMEFVHKMPMKPNPIIWRTLVAAC 125
Query: 184 RIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPG 243
R H LE E + LL P + +YV+LSN Y+ +R+WK+ IR M++R IKK PG
Sbjct: 126 RAHGRLELGETITRNLLNEYPAHEANYVMLSNVYALTRRWKEKSEIRREMSKRGIKKVPG 185
Query: 244 CILIEVDGVVHEFV------------------------KAGFVPNKSEVLFDMDEEEKET 279
C L+E+DG VHEF+ +AG + SEVL D+DEE+KE
Sbjct: 186 CSLVELDGEVHEFIAGDESHPQWKEIYMMVEEMARELRRAGHISATSEVLLDLDEEDKEV 245
Query: 280 ALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFH 339
AL H+EKLAI F L+ PG +R++KNLRVC+DCH A IS VYNRE +V DR+RFH
Sbjct: 246 ALQWHSEKLAIAFVLLRTPPGTQVRVVKNLRVCSDCHAAIKCISLVYNREIIVRDRSRFH 305
Query: 340 HFKNGSCSCKDFW 352
FKNGSCSC DFW
Sbjct: 306 RFKNGSCSCNDFW 318
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 159/398 (39%), Positives = 236/398 (59%), Gaps = 48/398 (12%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V S EAL+LFRE+Q KGL VT++S+L AC LGALE+G W+H YI K ++ V
Sbjct: 215 VRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLV 274
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ AL +D + ++V A G G +A+ F EM+ +
Sbjct: 275 KVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQ 334
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G+KPD +TF+GVL ACSH+G+V E + +F+ M E YGI I+HYGC+ +L R+G++ +
Sbjct: 335 GMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMRE-YGIVSGIKHYGCVTDLLARSGQLER 393
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A + I +P+ + LL AC H +++ +R +++LEL +GG YVI SN ++
Sbjct: 394 AYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCAN 453
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA-------------------- 259
+ +W+++ +R+LM+E+ + K PGC IE+D +VHEF
Sbjct: 454 TGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQ 513
Query: 260 ----GFVPNKSEVL-FDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VPN S V +M EEEK T+L H+EKLAI+FGL++ PG +RI+KNLRVC D
Sbjct: 514 LKLVGYVPNTSHVFHVEMGEEEKATSLRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPD 573
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+ ++S V+NR ++ D NRFHHF++G CSC D+W
Sbjct: 574 CHSMAKLVSMVFNRRIILRDLNRFHHFEDGVCSCGDYW 611
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 12/122 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y EA+ +F E++ +G+ D VT + +L AC+H G + G+ + +
Sbjct: 315 YANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMR------E 368
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
G+ +K +T L LA GQ +A ++ E+ I KP AI + +L AC+ G
Sbjct: 369 YGIVSGIKHYGCVTDL---LARSGQLERAYKFIDELPI---KPTAILWRTLLSACAGHGD 422
Query: 121 VD 122
VD
Sbjct: 423 VD 424
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 22/132 (16%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACT-----------HLGALEVGMWLHPYIMKKNIEV-- 59
+F + +G+ D T VSLL AC H A++ G H Y+ I +
Sbjct: 125 VFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYA 184
Query: 60 ---DVGLGMALKD------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVG 110
DV + D V++ A+I +AL F EMQ +G+KP ++T +
Sbjct: 185 ECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLIS 244
Query: 111 VLVACSHAGLVD 122
VL AC+ G ++
Sbjct: 245 VLSACALLGALE 256
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 158/398 (39%), Positives = 231/398 (58%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL F E++ G+ D TMVS++ A L W+H I++ ++ +
Sbjct: 425 YAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKN 484
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL D V+T A+I G G AL+ F +M+
Sbjct: 485 IFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKK 544
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V+P+ IT++ V+ ACSH+GLVDE + HF M + YG+ PS++HYG +V +LGRAGRI
Sbjct: 545 GAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIK 604
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I+NMP++ V G +LGAC+IH N+E E+AA++L EL PD GG +V+L+N Y+
Sbjct: 605 EAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYA 664
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
S+ KW KV +R+ M ++ +KK PGC ++E+ VH F
Sbjct: 665 STSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVY 724
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VP+ + ++ D++++ +E LN H+EKLAI FGL++ PG I + KNLRVC D
Sbjct: 725 EIKAAGYVPD-TNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGD 783
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT IS V RE +V D RFHHFKNG CSC D+W
Sbjct: 784 CHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 70/136 (51%), Gaps = 22/136 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ E+A+ +F ++ +G+ VT++ L AC LG LE G ++H ++ + N+ D
Sbjct: 324 YVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSD 383
Query: 61 VGLGMAL-------------KDV---------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + +L D+ ++ A+I+ A G+ ++AL F EM+
Sbjct: 384 ISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKS 443
Query: 99 RGVKPDAITFVGVLVA 114
G+KPD+ T V V+ A
Sbjct: 444 LGMKPDSFTMVSVIPA 459
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 82/189 (43%), Gaps = 23/189 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----KN 56
+ ++ ++AL L +Q +G D +T+V++L A +G L VG +H Y ++ K
Sbjct: 223 FSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKL 282
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + L GM K V++ +++ G+ KA+ F +M
Sbjct: 283 VNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLE 342
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ P +T + L AC+ G + ER + ++ + I L+ + + R+
Sbjct: 343 EGIDPTGVTIMEALHACADLGDL-ERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVD 401
Query: 159 KAEELIKNM 167
A ++ N+
Sbjct: 402 IASDIFNNL 410
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLV 121
M +D+++ +I + G KALE MQ G +PD+IT V VL A + GL+
Sbjct: 208 MPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLL 264
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 233/398 (58%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V+ EA+ LF +++ + + ++VT+VS+L AC LG L++G +H Y K + +
Sbjct: 117 FVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRN 176
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + L D V++ +A+I LAM GQ +AL F EM
Sbjct: 177 VHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIK 236
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVKP+ +TF+G+L ACSH GL+DE F M+ YG+ P IEHYGC+V + RAG +
Sbjct: 237 LGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLE 296
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E I +MP+ + V G LLG C++H N++ AE A + L EL P N G YV++SN Y+
Sbjct: 297 EAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYA 356
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ +W+ R+R+LM +R +KK G I V+GVVHEFV
Sbjct: 357 EAERWEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLV 416
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G+ P S VL DM+E+EKE L H+EKLA+ FGL++ G IRI+KNLRVC D
Sbjct: 417 KMKRRGYAPKTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNLRVCED 476
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A IIS + +RE +V DRNRFH F++G CSC+DFW
Sbjct: 477 CHAALKIISGIVSREIIVRDRNRFHCFRDGQCSCRDFW 514
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 63 LGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
L M K+V + T++I CG+ N+A++ F +++ V+P+ +T V VL AC+ G +D
Sbjct: 100 LRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLD 159
Query: 123 -ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
RI H S K G + ++ L+ + + G + A + M
Sbjct: 160 LGRIVH--EYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEM 203
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 170/399 (42%), Positives = 225/399 (56%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + E L +FRE L D T+VS+L AC +GAL +G +H + K + +
Sbjct: 198 FAANGRPNEVLTIFRETLEADLMPDGFTIVSVLTACAEIGALTLGRRVHVFASKVGLVGN 257
Query: 61 VGLGMALKD-----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+G AL D V++ T+LIV LA G G ALE F M+
Sbjct: 258 SHVGNALIDLYAKCGGVEDAWKVFEEMGVARTVVSWTSLIVGLAGNGFGKDALELFGLME 317
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+ P IT VGVL ACSH GLVD+ +FN M +KYGI P IEH GC+V +LGRAGR+
Sbjct: 318 RERLIPTDITMVGVLYACSHCGLVDDGFRYFNEMQDKYGIAPGIEHLGCMVDLLGRAGRV 377
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A I MP+ + V LLGAC +H LE E A +L+EL P + G YV+LSN Y
Sbjct: 378 EEAHNYITTMPVEPNAVVWRTLLGACAMHKKLELGEAAWARLVELDPGHSGDYVLLSNLY 437
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
++ +W +R+ MA ++K PG L+E+ V+EFV
Sbjct: 438 AAVGRWADAHVLRKTMATHGVRKNPGHSLVELRNSVYEFVMGDRSHPESDQIYQTLAEIA 497
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+VP S VL D++EEEKETALN H+E+LAI F L+ +PG IRI+KNLR+C
Sbjct: 498 ERLRCQGYVPRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGSPIRIVKNLRMCG 557
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH +ISKVY+RE +V DR+RFHHFK G CSCKD+W
Sbjct: 558 DCHLVIKLISKVYDREIIVRDRSRFHHFKGGECSCKDYW 596
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 159/398 (39%), Positives = 236/398 (59%), Gaps = 48/398 (12%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V S EAL+LFRE+Q KGL VT++S+L AC LGALE+G W+H YI K ++ V
Sbjct: 215 VRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLV 274
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ AL +D + ++V A G G +A+ F EM+ +
Sbjct: 275 KVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQ 334
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G+KPD +TF+GVL ACSH+G+V E + +F+ M E YGI I+HYGC+ +L R+G++ +
Sbjct: 335 GMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMRE-YGIVSGIKHYGCVTDLLARSGQLER 393
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A + I +P+ + LL AC H +++ +R +++LEL +GG YVI SN ++
Sbjct: 394 AYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCAN 453
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA-------------------- 259
+ +W+++ +R+LM+E+ + K PGC IE+D +VHEF
Sbjct: 454 TGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQ 513
Query: 260 ----GFVPNKSEVL-FDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VPN S V +M EEEK T+L H+EKLAI+FGL++ PG +RI+KNLRVC D
Sbjct: 514 LKLVGYVPNTSHVFHVEMGEEEKATSLRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPD 573
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+ ++S V+NR ++ D NRFHHF++G CSC D+W
Sbjct: 574 CHSMAKLVSMVFNRRIILRDLNRFHHFEDGVCSCGDYW 611
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 12/122 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y EA+ +F E++ +G+ D VT + +L AC+H G + G+ + +
Sbjct: 315 YANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMR------E 368
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
G+ +K +T L LA GQ +A ++ E+ I KP AI + +L AC+ G
Sbjct: 369 YGIVSGIKHYGCVTDL---LARSGQLERAYKFIDELPI---KPTAILWRTLLSACAGHGD 422
Query: 121 VD 122
VD
Sbjct: 423 VD 424
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 22/132 (16%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACT-----------HLGALEVGMWLHPYIMKKNIEV-- 59
+F + +G+ D T VSLL AC H A++ G H Y+ I +
Sbjct: 125 VFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYA 184
Query: 60 ---DVGLGMALKD------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVG 110
DV + D V++ A+I +AL F EMQ +G+KP ++T +
Sbjct: 185 ECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLIS 244
Query: 111 VLVACSHAGLVD 122
VL AC+ G ++
Sbjct: 245 VLSACALLGALE 256
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 160/397 (40%), Positives = 233/397 (58%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V+ S EEA+ L RE+Q++G+ GD+VTMV + AC +LGAL++ W++ YI K +I +D+
Sbjct: 432 VQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDM 491
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
LG AL +DV TA I V A+ G A+E F EM +
Sbjct: 492 QLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQ 551
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
VK D FV +L A SH G VD+ F M + +G+ P I HYGC+V +LGRAG + +
Sbjct: 552 DVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEE 611
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A +L+K+MP+ + + G L ACR H N+E A A +++ +L P+ G +V+LSN Y+S
Sbjct: 612 AFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYAS 671
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
+ KW V R+R M E+ +K G IEV G++ EF
Sbjct: 672 AGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQEINCR 731
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+ G+VP+ + VL D+DE+EKE L+ H+EKLA+ +GL++ G+ IR++KNLR+C+DC
Sbjct: 732 ISQVGYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLINTGKGIPIRVVKNLRMCSDC 791
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H+ ++SK+Y RE V D NR+H FK G CSC+DFW
Sbjct: 792 HSFAKLVSKLYGREITVRDNNRYHFFKEGFCSCRDFW 828
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 87/220 (39%), Gaps = 54/220 (24%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE-- 58
YV+ E L++ E+ KG DKVTM+S + AC LG L VG H Y+ + +E
Sbjct: 299 YVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERL 358
Query: 59 -------VDVGL-------------GMALKDVMTLTALIVVLAMCGQGNKALEYF----- 93
+D+ + M+ K V+T +LI L G+ AL F
Sbjct: 359 DNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPE 418
Query: 94 --------------------------YEMQIRGVKPDAITFVGVLVACSHAGLVDERISH 127
EMQ +G+K D +T VG+ AC + G +D
Sbjct: 419 SNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWI 478
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ + EK I ++ LV + R G A + +NM
Sbjct: 479 YTYI-EKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENM 517
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 32/212 (15%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y C+EA+ ++ + G+ D T LL AC+ + A G+ +H ++K +
Sbjct: 96 YAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVK 155
Query: 60 D----------------VGLG------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
D V LG M ++V++ T+LI ++ +A+ F+EM
Sbjct: 156 DLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMV 215
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV+P+ +T V + AC+ ++ NLM+E G++ + L+ + + G +
Sbjct: 216 EVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTE-LGVKSNTLVVNALLDMYMKCGDM 274
Query: 158 AKAEELI-----KNMPM---ALDHFVLGGLLG 181
E+ KN+ M + ++V GL G
Sbjct: 275 YAVREIFDEFSDKNLVMYNTIMSNYVQHGLAG 306
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 163/398 (40%), Positives = 232/398 (58%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y E +EAL LF E+Q G+ D+VT++S++ AC LG L+ W+H Y+ K
Sbjct: 55 YAESDKPQEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGA 114
Query: 56 ----NIEVDV-----GLG--------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
N +D+ LG M ++V++ T++I A+ G + AL++FY+M+
Sbjct: 115 LPVNNALIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKD 174
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+KP+ +TFVGVL ACSHAGLV+E F M+ ++ I P EHYGC+V + GRA +
Sbjct: 175 ENIKPNGVTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLR 234
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A EL++ MP+A + + G L+ AC+IH E E AA+Q+LEL PD+ G+ V LSN Y+
Sbjct: 235 DALELVETMPLAPNVVIWGSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYA 294
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
R+W+ V +R LM +R I K GC IE++ V+EFV A
Sbjct: 295 KDRRWQDVGELRNLMKQRGISKERGCSRIELNNQVYEFVMADKKHKQADKIYEKLDEVVK 354
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ PN VL D++EE K+ + H+EKLA+ +GL+ G IRI+KNLRVC D
Sbjct: 355 ELKLVGYTPNTRSVLVDVEEEGKKEVVLWHSEKLALCYGLMGEGKGSCIRIVKNLRVCED 414
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHT ++SKVY E +V DR RFHH+K G CSC D+W
Sbjct: 415 CHTFIKLVSKVYGMEIIVRDRTRFHHYKAGVCSCNDYW 452
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
M KD++ +A+I A + +AL F EMQ+ G+KPD +T + V+ AC+ G++D R
Sbjct: 40 MEEKDLVCWSAMISGYAESDKPQEALNLFSEMQVFGIKPDQVTILSVISACARLGVLD-R 98
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACR 184
++ +K G+ ++ L+ + + G + A + + M + + ++ A
Sbjct: 99 AKWIHMYVDKNGLGGALPVNNALIDMYAKCGNLGAARGVFEKM-QSRNVISWTSMINAFA 157
Query: 185 IHDNLEAAERAAQQLL-ELLPDNGGSYV 211
IH + A + Q+ E + NG ++V
Sbjct: 158 IHGDASNALKFFYQMKDENIKPNGVTFV 185
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 159/398 (39%), Positives = 236/398 (59%), Gaps = 48/398 (12%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V S EAL+LFRE+Q KGL VT++S+L AC LGALE+G W+H YI K ++ V
Sbjct: 215 VRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLV 274
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ AL +D + ++V A G G +A+ F EM+ +
Sbjct: 275 KVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQ 334
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G+KPD +TF+GVL ACSH+G+V E + +F+ M E YGI I+HYGC+ +L R+G++ +
Sbjct: 335 GMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMRE-YGIVSGIKHYGCVTDLLARSGQLER 393
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A + I +P+ + LL AC H +++ +R +++LEL +GG YVI SN ++
Sbjct: 394 AYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCAN 453
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA-------------------- 259
+ +W+++ +R+LM+E+ + K PGC IE+D +VHEF
Sbjct: 454 TGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQ 513
Query: 260 ----GFVPNKSEVL-FDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VPN S V +M EEEK T+L H+EKLAI+FGL++ PG +RI+KNLRVC D
Sbjct: 514 LKLVGYVPNTSHVFHVEMGEEEKATSLRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPD 573
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+ ++S V+NR ++ D NRFHHF++G CSC D+W
Sbjct: 574 CHSMAKLVSMVFNRRIILRDLNRFHHFEDGVCSCGDYW 611
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 22/137 (16%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACT-----------HLGALEVGMWLHPYIMKKN 56
EEA +F + +G+ D T VSLL AC H A++ G H Y+
Sbjct: 120 EEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTL 179
Query: 57 IEV-----DVGLGMALKD------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
I + DV + D V++ A+I +AL F EMQ +G+KP +
Sbjct: 180 INMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTS 239
Query: 106 ITFVGVLVACSHAGLVD 122
+T + VL AC+ G ++
Sbjct: 240 VTLISVLSACALLGALE 256
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 12/122 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y EA+ +F E++ +G+ D VT + +L AC+H G + G+ + +
Sbjct: 315 YANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMR------E 368
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
G+ +K +T L LA GQ +A ++ E+ I KP AI + +L AC+ G
Sbjct: 369 YGIVSGIKHYGCVTDL---LARSGQLERAYKFIDELPI---KPTAILWRTLLSACAGHGD 422
Query: 121 VD 122
VD
Sbjct: 423 VD 424
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 306 bits (785), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 158/397 (39%), Positives = 238/397 (59%), Gaps = 45/397 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ E AL LF ++ +G+ +++T+ SLL AC +LGA+++G H I K +
Sbjct: 662 YVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTF 721
Query: 61 VGLGMAL---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ +G +L D++T A++V A G G +A++ F +M++
Sbjct: 722 LFVGNSLITMYFKCGYEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVE 781
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G+ PD ++F+GVL ACSHAGLVDE +HFN M++KYGI P + HY C+V +LGRAG +++
Sbjct: 782 GILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSE 841
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
AE LI+NMP+ D + LLGACRIH N+E +R A++L ++ +YV+LSN ++S
Sbjct: 842 AEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFAS 901
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA-------------------- 259
W KV IR+LM ++ + K PG I+V +H FV
Sbjct: 902 QGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGC 961
Query: 260 ----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
G++P+ + VL D++EE+K+ L H+EKLA+ FG++S G I+IIKNLR+C DC
Sbjct: 962 FRATGYMPDTNFVLHDVEEEQKQNELLYHSEKLAVVFGILSTPNGSPIQIIKNLRICGDC 1021
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
HT +SKV R+ ++ D NRFHHF++GSCSC D+W
Sbjct: 1022 HTFMKFMSKVTLRKIIIRDGNRFHHFRDGSCSCGDYW 1058
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 64/174 (36%), Gaps = 53/174 (30%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHP---------- 50
+V++ EAL L E+ G + S L AC ++G +E+G +H
Sbjct: 530 FVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFN 589
Query: 51 -YIMKKNIEVDVGLG------------------------------------------MAL 67
Y+M I + G M
Sbjct: 590 SYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPK 649
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLV 121
+DV++ TA+I G G AL+ F +M RG+KP+ +T +L AC + G +
Sbjct: 650 RDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAI 703
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 306 bits (785), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 163/398 (40%), Positives = 232/398 (58%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E E+L+LF +++ +G+ DKV MV+++ AC LGA+ + YI +K ++D
Sbjct: 308 YAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLD 367
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG A+ K+V++ +A+I GQG KAL+ F M
Sbjct: 368 VILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLR 427
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ P+ IT V +L ACSHAGLV+E + F+LM E Y +R ++HY C+V +LGRAGR+
Sbjct: 428 SGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLD 487
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI++M + D + G LGACR H ++ AE+AA LLEL P N G Y++LSN Y+
Sbjct: 488 EALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYA 547
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
++ +W+ V + R+LM++R +KK PG IEVD H+F
Sbjct: 548 NAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGN 607
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VP+ + VL D+DEE K L H+EKLAI FGL++ IRIIKNLRVC D
Sbjct: 608 KLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGD 667
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHT ++S + R +V D NRFHHFK G+CSC D+W
Sbjct: 668 CHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 29/193 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E E+L+LF +++ +G+ DKV MV+++ AC LGA+ + YI +K ++D
Sbjct: 106 YAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLD 165
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG A+ K+V++ +A+I GQG KAL+ F M
Sbjct: 166 VILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLS 225
Query: 99 RGVKPDAITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGC--LVYILGRAG 155
G+ PD IT +L ACS L R+ H + K+G+ ++H+ C LV + G+
Sbjct: 226 SGMLPDKITLASLLYACSDLKNLQMGRLIHH--IVYKFGL--DLDHFVCAALVDMYGKCR 281
Query: 156 RIAKAEELIKNMP 168
I A L MP
Sbjct: 282 EIEDARFLFDKMP 294
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 22/133 (16%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
+AL LFR + G+ DK+T+ SLL AC+ L L++G +H + K +++D + AL
Sbjct: 215 KALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALV 274
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+D++T T +I A CG N++L F +M+ GV PD +
Sbjct: 275 DMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKV 334
Query: 107 TFVGVLVACSHAG 119
V V+ AC+ G
Sbjct: 335 AMVTVVFACAKLG 347
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 129/325 (39%), Gaps = 77/325 (23%)
Query: 14 FREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL------ 67
FRE+ G D T+ ++ AC L L++G +H + K +++D + AL
Sbjct: 18 FRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVK 77
Query: 68 ----------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGV 111
+D++T T +I A CG+ N++L F +M+ GV PD + V V
Sbjct: 78 CREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTV 137
Query: 112 LVACSHAG------LVDERISH-----------------------------FNLMSEKYG 136
+ AC+ G ++D+ I F+ M EK
Sbjct: 138 VFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEK-- 195
Query: 137 IRPSIEHYGCLVYILGRAGRIAKAEELIKNM---PMALDHFVLGGLLGACRIHDNLEAAE 193
++ + ++ G G+ KA +L + M M D L LL AC NL+
Sbjct: 196 ---NVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMG- 251
Query: 194 RAAQQLLELLPDNGGSYV--ILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDG 251
R ++ + +V L + Y R+ + + + + M ER+ L+
Sbjct: 252 RLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERD--------LVTWTV 303
Query: 252 VVHEFVKAGFVPNKSEVLFDMDEEE 276
++ + + G N+S VLFD EE
Sbjct: 304 MIGGYAECG-NANESLVLFDKMREE 327
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 306 bits (785), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 163/398 (40%), Positives = 230/398 (57%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E E+L+LF +++ +G+ DKV MV+++ AC LGA+ + YI +K ++D
Sbjct: 912 YAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLD 971
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG A+ K+V++ +A+I GQG KAL+ F M
Sbjct: 972 VILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLR 1031
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ P+ IT V +L ACSHAGLV+E + F+ M E Y +R ++HY C+V +LGRAGR+
Sbjct: 1032 SGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLD 1091
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI +M D + G LGACR H ++ AE+AA LLEL P N G Y++LSN Y+
Sbjct: 1092 EALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYA 1151
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
++ +W+ V +IR+LM++R +KK PG IEVD H+F
Sbjct: 1152 NAGRWEDVAKIRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGN 1211
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VP+ + VL D+DEE K L H+EKLAI FGL++ IRIIKNLRVC D
Sbjct: 1212 KLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGD 1271
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHT ++S + R +V D NRFHHFK G+CSC D+W
Sbjct: 1272 CHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 1309
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 211/375 (56%), Gaps = 49/375 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E E+L+LF +++ +G+ DKV MV+++ AC LGA+ + YI +K ++D
Sbjct: 236 YAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLD 295
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG A+ K+V++ +A+I GQG KAL+ F M
Sbjct: 296 VILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLS 355
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD IT +L ACSHAGLV+E + F+ M E Y +R ++HY C+V +LGRAGR+
Sbjct: 356 SGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLD 415
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LIK+M + D + G LGACR H ++ AE+AA LLEL N G YV+LSN Y+
Sbjct: 416 EALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYA 475
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
++ +W+ V +IR+LM++R +KK PG IEVD H+F
Sbjct: 476 NAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSN 535
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLR---V 311
G+VP+ + VL D+DEE K L H+EKLAI FGL++ IRIIKNLR +
Sbjct: 536 KLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLREKKL 595
Query: 312 CNDCHTATNIISKVY 326
+ H ++I++ VY
Sbjct: 596 YLELHVHSSIVNLVY 610
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 22/128 (17%)
Query: 14 FREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL------ 67
FRE+ G D T+ ++ AC L L++G +H + K +++D + AL
Sbjct: 148 FRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVK 207
Query: 68 ----------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGV 111
+D++T T +I A CG+ N++L F +M+ GV PD + V V
Sbjct: 208 CREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTV 267
Query: 112 LVACSHAG 119
+ AC+ G
Sbjct: 268 VFACAKLG 275
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 22/128 (17%)
Query: 14 FREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL------ 67
FRE+ G D T+ ++ AC L L++G +H + K +++D + AL
Sbjct: 824 FRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGK 883
Query: 68 ----------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGV 111
+D++T T +I A CG N++L F +M+ GV PD + V V
Sbjct: 884 CREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTV 943
Query: 112 LVACSHAG 119
+ AC+ G
Sbjct: 944 VFACAKLG 951
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 306 bits (785), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 235/398 (59%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN---- 56
Y E + +EAL LF E+Q G+ D+VTM+S++ AC HLGAL+ W+H ++ K
Sbjct: 330 YAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGA 389
Query: 57 -------IEVDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
IE+ G M K+V++ T +I AM G AL +F++M+
Sbjct: 390 LPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMED 449
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
++P+ ITFVGVL ACSHAGLV+E F M ++ I P HYGC+V + GRA +
Sbjct: 450 ENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLR 509
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A EL++ MP+A + + G L+ ACR+H +E E AA++LLEL PD+ G++V LSN Y+
Sbjct: 510 EALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYA 569
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+R+W+ V ++R+LM + I K GC E++ +HEF+ A
Sbjct: 570 KARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVS 629
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ PN +L D++EEEK+ + H+EKLA+ +GL+ G IRIIKNLRVC D
Sbjct: 630 KLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMRDGTGSCIRIIKNLRVCED 689
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHT + SKVY RE VV DR RFHH+K+G CSCKD+W
Sbjct: 690 CHTFIKLASKVYEREIVVRDRTRFHHYKDGVCSCKDYW 727
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 109/265 (41%), Gaps = 56/265 (21%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +ALLLF E+++ + D++ + ++L AC G L G +H +IM+ NI VD
Sbjct: 198 YCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVD 257
Query: 61 VGLGMAL----------------------------------------------------- 67
L AL
Sbjct: 258 PHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVK 317
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISH 127
KD++ +A+I A +AL F EMQ G+KPD +T + V+ AC+H G +D+
Sbjct: 318 KDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQ-AKW 376
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHD 187
+L +K G ++ L+ + + G + +A + MP + ++ A +H
Sbjct: 377 IHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRK-NVISWTCMISAFAMHG 435
Query: 188 NLEAAERAAQQLL-ELLPDNGGSYV 211
+ +A R Q+ E + NG ++V
Sbjct: 436 DAGSALRFFHQMEDENIEPNGITFV 460
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 25/183 (13%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLH-----------PYIMKKN 56
E+ LL++ ++ +GL D+ + LL A + + +L G+ +H P++
Sbjct: 104 EKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGL 163
Query: 57 IEVDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+ + G M +DV+T + +I G N AL F EM+ V+PD
Sbjct: 164 VRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDE 223
Query: 106 ITFVGVLVACSHAG-LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+ VL AC AG L ++ H +M + P ++ LV + G + A L
Sbjct: 224 MMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQ--SALVTMYASCGSMDLALNLF 281
Query: 165 KNM 167
+ M
Sbjct: 282 EKM 284
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 306 bits (785), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 164/404 (40%), Positives = 234/404 (57%), Gaps = 52/404 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTG-DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
YV+ + EA LF ++ + DK ++L ACT LGAL+ G W+H YI + IE+
Sbjct: 229 YVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLSACTGLGALDQGKWIHEYIKRNGIEL 288
Query: 60 DVGLGMALKD------------------------VMTLTALIVVLAMCGQGNKALEYFYE 95
D L A+ D + + +I LAM G G A++ F E
Sbjct: 289 DSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWISSWNCMIGGLAMHGNGEAAIQLFKE 348
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
M+ + V PD ITF+ +L AC+H+GLV+E ++F+ M YGI P +EH+GC+V +LGRAG
Sbjct: 349 MERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSYMIRVYGIEPRMEHFGCMVDLLGRAG 408
Query: 156 RIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSN 215
+ +A +LI MP++ D VLG LLGAC+ H N+E E ++++EL P+N G YV+L+N
Sbjct: 409 MVPEARKLIDEMPVSPDVTVLGTLLGACKKHRNIELGEEIGRRVIELEPNNSGRYVLLAN 468
Query: 216 RYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------ 257
Y+++ KW+ ++R+LM +R +KK PG +IE+ G VHEF+
Sbjct: 469 LYANAGKWEDAAKVRKLMDDRGVKKAPGFSMIELQGTVHEFIAGERNHPQAKELHAKVYE 528
Query: 258 ------KAGFVPNKSEVL--FDMDEEEK-ETALNLHTEKLAITFGLVSPMPGVLIRIIKN 308
G+V + + VL D DEEE E L H+EKLAI FGL PG +RI+KN
Sbjct: 529 MLEHLKSVGYVADTNGVLHGHDFDEEEDGENPLYYHSEKLAIAFGLSRTKPGETLRILKN 588
Query: 309 LRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
LR+C DCH A +IS V++RE +V DR RFH FK G CSC+D+W
Sbjct: 589 LRICEDCHHACKLISTVFDREIIVRDRTRFHRFKMGQCSCQDYW 632
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 25/177 (14%)
Query: 11 LLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKDV 70
LLL+ + + + T SLL+AC ++ GM +H ++ K G G
Sbjct: 110 LLLYSHMLQNSVLPNNFTFPSLLIACR---KIQHGMQIHAHLFK------FGFG---AHS 157
Query: 71 MTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNL 130
+ L +LI + +A F+ + PD++++ ++ S GL+DE + F L
Sbjct: 158 VCLNSLIHMYVTFQALEEARRVFHTIP----HPDSVSWTSLISGYSKWGLIDEAFTIFQL 213
Query: 131 MSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPM----ALDHFVLGGLLGAC 183
M +K + + ++ + R +A L M LD FV +L AC
Sbjct: 214 MPQK-----NSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLSAC 265
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 306 bits (785), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 167/403 (41%), Positives = 230/403 (57%), Gaps = 52/403 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHL-----GALEVGMWLHPYIMKK 55
Y EAL + E+ +G D+VTM+S + A L G + G W+H YI K
Sbjct: 267 YARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKN 326
Query: 56 NIEVDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYF 93
I D+ L AL +DV TA I +AM G G A F
Sbjct: 327 GIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLF 386
Query: 94 YEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGR 153
+M I+GVKPD + FV VL ACSH G V++ + F+LM E +GI P IEHYGC+V +LGR
Sbjct: 387 NQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLM-EDHGISPQIEHYGCMVDLLGR 445
Query: 154 AGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVIL 213
AG + +A +LIK+MPM + V G LL ACR+H N+E A AA+++ EL P G +V+L
Sbjct: 446 AGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLL 505
Query: 214 SNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK--------------- 258
SN Y+S+ KW V R+R + E+ ++K PG ++V+GV+HEF
Sbjct: 506 SNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALML 565
Query: 259 ---------AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNL 309
AG +P+ S VL D+DE+EKE L+ H+EKLAI FGL++ + IR++KNL
Sbjct: 566 QEMNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNL 625
Query: 310 RVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
R+C+DCH+ + S +YNRE +V D NRFH F+ G CSC D+W
Sbjct: 626 RMCSDCHSFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 668
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 306 bits (784), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 230/398 (57%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +EAL LFRE+Q + +VS+L AC+ LGAL+ G W+H YI KK + VD
Sbjct: 199 YAQNGQPKEALALFREMQMLDQEPNSAILVSVLSACSQLGALDHGCWVHCYIGKKCVRVD 258
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L AL +DV TA I LAM G +AL+ F +M+
Sbjct: 259 SILSAALIDMYAKCGSIDLAMQAFSTSRKRDVSAYTAAISGLAMNGCSEEALQLFEQMKG 318
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD ++++ VL ACSHAG V++ +F MS+ +GIRP ++HY C+V +LGRAG +
Sbjct: 319 EGISPDGVSYIAVLCACSHAGWVEKGFHYFASMSDVHGIRPELDHYACMVDLLGRAGLLE 378
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE+ + +MP+ D+ + G LLGACR++ N E +R L+E ++ G Y++LSN Y+
Sbjct: 379 EAEKFVASMPIKPDNVIWGALLGACRVYGNAEMGQRVGSLLVESDQNHDGRYILLSNIYA 438
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S K + +++R+ M R + + PGC LIEV G VHEF
Sbjct: 439 ESMKGEDAEQVRKTMRRRKVDRVPGCSLIEVAGFVHEFFSGDRSHEKTEEIYLMWEEIVK 498
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+ V+FD++EEEKE + H+EKLA+ FG + G +RI+KN+R+C+D
Sbjct: 499 EIKKFGYREETRAVVFDVEEEEKEAVIGHHSEKLAVAFGFLYTKSGSTLRIVKNIRICSD 558
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ++SKV+ R+ + DR FHHF+ G CSCKD+W
Sbjct: 559 CHYAIKLVSKVFKRKIAIRDRKCFHHFEEGLCSCKDYW 596
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKD 69
++LLF + L + T L C++ A ++G H ++K + E+ D
Sbjct: 76 SVLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAFDLGRQFHGMVIKNSFEM---------D 126
Query: 70 VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFN 129
V ++I ++CG+ N A F E + D +++ ++ C G + E +S F+
Sbjct: 127 VFVRNSIIRFYSVCGRLNDARWVFDESS----ELDVVSWNSMIDGCIRNGNILEALSLFS 182
Query: 130 LMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDH----FVLGGLLGAC 183
M+E+ I + ++ + G+ +A L + M M LD +L +L AC
Sbjct: 183 KMTERNDI-----SWNMMISGYAQNGQPKEALALFREMQM-LDQEPNSAILVSVLSAC 234
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 306 bits (784), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 159/405 (39%), Positives = 234/405 (57%), Gaps = 53/405 (13%)
Query: 1 YVEDSACEEALLLFREVQHKG-------LTGDKVTMVSLLLACTHLGALEVGMWLHPYIM 53
Y + EAL+ FR++ + +++T+V++L +C +GALE G W+H Y+
Sbjct: 224 YAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVE 283
Query: 54 KKNIEVDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALE 91
I+V+V +G AL KDV+ ++I+ + G ++AL+
Sbjct: 284 NNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQ 343
Query: 92 YFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYIL 151
F+EM GVKP ITFV VL AC+HAGLV + F+ M + YG+ P +EHYGC+V +L
Sbjct: 344 LFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYGCMVNLL 403
Query: 152 GRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYV 211
GRAGR+ +A +L+++M + D + G LL ACRIH N+ E A+ L+ + G+YV
Sbjct: 404 GRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVSLGEEIAEILVSNGLASSGTYV 463
Query: 212 ILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAG----------- 260
+LSN Y+++R W V ++R +M ++K PGC IEV VHEFV
Sbjct: 464 LLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSIEVKNRVHEFVAGDRRHPRSKDIYS 523
Query: 261 -------------FVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIK 307
+ P VL D+ E+EKE +L +H+EKLA+ FGL+S PG I+I+K
Sbjct: 524 MLEKMNGWLKERHYTPKTDAVLHDIGEQEKEQSLEVHSEKLALAFGLISTSPGAAIKIVK 583
Query: 308 NLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
NLRVC DCH I+SK+ R+ ++ DRNRFHHF+NGSCSC+D+W
Sbjct: 584 NLRVCLDCHAVMKIMSKISGRKIIMRDRNRFHHFENGSCSCRDYW 628
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 306 bits (784), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 222/398 (55%), Gaps = 66/398 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y S ++ LF E+ + + + VTMVSLL C GAL++G W H YI + +EVD
Sbjct: 368 YAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVD 427
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V L AL +D+ ++ +M G G +ALE F EM+
Sbjct: 428 VILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMES 487
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+P+ ITFV + ACSH+GL +EHYGCLV +LGRAG +
Sbjct: 488 HGVEPNDITFVSIFHACSHSGL--------------------MEHYGCLVDLLGRAGHLD 527
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +I+NMPM + + G LL AC++H NL E AA+++LEL P N G V+ SN Y+
Sbjct: 528 EAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYA 587
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S+++W V +RE M+ +KK PG IEV G VH F
Sbjct: 588 SAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCI 647
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
++G+ PN + VL ++DEEEKE+AL+ H+EKLA FGL+S PG IRI+KNLR+C+D
Sbjct: 648 KLRESGYTPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAPGTPIRIVKNLRICDD 707
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT ++SK+Y R +V DRNRFHHF G CSC +W
Sbjct: 708 CHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 745
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 22/131 (16%)
Query: 14 FREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL------ 67
F + + L +++T++SL+ C +G L++G W H Y+++ + + L AL
Sbjct: 280 FNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGK 339
Query: 68 ----------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGV 111
KDV + LI A ++ F EM VKP+ +T V +
Sbjct: 340 CGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSL 399
Query: 112 LVACSHAGLVD 122
L C+ AG +D
Sbjct: 400 LSLCAEAGALD 410
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 27/190 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK--NIE 58
YV A EAL L RE+Q G+ V ++SL+ +L ++ G +H YI++ + +
Sbjct: 164 YVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEK 223
Query: 59 VDVGLGMALKDVM-------------------TLTALIVVLAMCGQG---NKALEYFYEM 96
++V + AL D+ ++ + V++A C + ++ + F M
Sbjct: 224 MEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRM 283
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
+ P+ IT + ++ C G +D + H L+ +G+ S+ L+ + G+ G
Sbjct: 284 LEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGM--SLALVTALIDMYGKCG 341
Query: 156 RIAKAEELIK 165
++ A L
Sbjct: 342 QVGYARALFN 351
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 306 bits (784), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 162/399 (40%), Positives = 226/399 (56%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+E+ + AL ++ ++ G+ D+ T +L+ A + L ALE G +H ++K + +D
Sbjct: 1175 YIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLD 1234
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G +L D V+ A+++ LA G ++AL F MQ
Sbjct: 1235 HFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQS 1294
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD +TF+GVL ACSH+GL E +F+ M + YGI P IEHY CLV LGRAGRI
Sbjct: 1295 NGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQ 1354
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE +I +MP + LLGACR + E A+R A +LL L P + +YV+LSN Y+
Sbjct: 1355 EAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYA 1414
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+SR+W V R +M +N+KK PG I+V VH FV
Sbjct: 1415 ASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMK 1474
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ +VP+ L D++EEEKE AL H+EKLAI FGL+S P IR+IKNLRVC
Sbjct: 1475 RIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCG 1534
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+A ISK+ RE V+ D NRFHHF+NG+CSC D+W
Sbjct: 1535 DCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 80/192 (41%), Gaps = 29/192 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y++ + +AL F + G+ D++T+ + + A L L+ G + Y +K D
Sbjct: 1074 YIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNND 1133
Query: 61 VG-----LGMALK-----------------DVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L M +K D + T +I G + AL ++ M++
Sbjct: 1134 LWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRV 1193
Query: 99 RGVKPDAITFVGVLVACS-HAGLVDERISHFNLMSEKYGIRPSIEHY--GCLVYILGRAG 155
GV+PD TF ++ A S L + H N++ Y S++H+ LV + + G
Sbjct: 1194 SGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDY----SLDHFVGTSLVDMYCKCG 1249
Query: 156 RIAKAEELIKNM 167
+ A + + M
Sbjct: 1250 SVQDAYRVFRKM 1261
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 306 bits (784), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 170/396 (42%), Positives = 227/396 (57%), Gaps = 51/396 (12%)
Query: 8 EEALLLFREVQH-KGLTGDKVTMVSLLLACTHLGALEVGMWLHPY---IMKKNIEVDVGL 63
E+A L E+ L D+VTMVSL+ AC LG LE G +LH Y + K I D+ L
Sbjct: 194 EKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVL 253
Query: 64 GMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGV 101
AL D V T ALI LAM G G A+ F +M+ +
Sbjct: 254 ETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKL 313
Query: 102 KPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAE 161
PD +TF+ +L ACSHAGLVDE ++ F M K+ I P +EHYGC+V +L RA ++ A
Sbjct: 314 MPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDAL 373
Query: 162 ELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSR 221
I+NMP+ + + LLGACR + + AE+ ++++EL PD+ G YV+LSN Y+
Sbjct: 374 AFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVS 433
Query: 222 KWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------ 257
+W ++R+ M + I+K PGC IE++G++H+FV
Sbjct: 434 QWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVN 493
Query: 258 -KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCH 316
G VP + VLFD++EEEKE +L LH+EKLAI GL+S G IRI+KNLRVCNDCH
Sbjct: 494 LDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCH 553
Query: 317 TATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ + SKVYNRE V DR+RFHHFK GSCSC DFW
Sbjct: 554 SFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 589
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 101/233 (43%), Gaps = 28/233 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y EA+ L+ + +G+ D T +L AC LGA+++G H ++K D
Sbjct: 86 YARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSD 145
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM-Q 97
+ + AL +DV+T +I G KA + EM +
Sbjct: 146 LFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTK 205
Query: 98 IRGVKPDAITFVGVLVACSHAGLVD--ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
+ ++PD +T V ++ AC+ G ++ + + ++ +K+ I + LV + + G
Sbjct: 206 LDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCG 265
Query: 156 RIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLL--ELLPDN 206
I A ++ + M + + F L+G +H + E A Q+ +L+PD+
Sbjct: 266 SIDLALQVFRRMRVR-NVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDD 317
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 163/401 (40%), Positives = 228/401 (56%), Gaps = 49/401 (12%)
Query: 1 YVEDSACEEALLLFREVQ-HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y+++ EA+ ++ +Q H+GL + T VS+L A +HLGAL+ G +H +K + +
Sbjct: 348 YMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNL 407
Query: 60 DVGLGMALKDVMT----------------------LTALIVVLAMCGQGNKALEYFYEMQ 97
DV +G + D+ A+I + + G G KAL F +MQ
Sbjct: 408 DVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQ 467
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G+ PD +TFV +L ACSHAGLVD+ + FN+M YGI+P +HY C+V + GRAG++
Sbjct: 468 QEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQL 527
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
A + I+NMP+ D + G LLGACRIH N+E + A+Q L EL P N G YV++SN Y
Sbjct: 528 DDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMY 587
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
+ KW V +R L+ +N++K PG IEV V+ F
Sbjct: 588 AKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLD 647
Query: 260 --------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
G+VP+ S VL D++E+EKE LN H+E+LAI FG+++ P + I KNLRV
Sbjct: 648 LLAKIRSLGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPRTPLHIYKNLRV 707
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH AT ISK+ RE +V D NRFHHFK+G CSC DFW
Sbjct: 708 CGDCHNATKYISKITEREIIVRDSNRFHHFKDGYCSCGDFW 748
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 87/190 (45%), Gaps = 24/190 (12%)
Query: 3 EDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE---- 58
++ EA+ LF + +G+ GD VT+ S+L C LG + + +H Y +K ++
Sbjct: 147 RNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELF 206
Query: 59 -----VDV----GL---------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG 100
+DV G+ GM+ +D++T ++I GQ A+E F M+ G
Sbjct: 207 VCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSG 266
Query: 101 VKPDAITFVGVLVACSHAG-LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
V PD +T + + A + G + R H ++ + + I +V + + +I
Sbjct: 267 VSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAG-NAIVDMYAKLSKIEA 325
Query: 160 AEELIKNMPM 169
A+ + +MP+
Sbjct: 326 AQRMFDSMPV 335
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 63/131 (48%), Gaps = 12/131 (9%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
A+ +F ++ G++ D +T++SL A G + G +H Y++++ DVG
Sbjct: 254 SAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGW--DVG------ 305
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHF 128
D++ A++ + A + A F M +R DA+++ ++ GL E I +
Sbjct: 306 DIIAGNAIVDMYAKLSKIEAAQRMFDSMPVR----DAVSWNTLITGYMQNGLASEAIHVY 361
Query: 129 NLMSEKYGIRP 139
+ M + G++P
Sbjct: 362 DHMQKHEGLKP 372
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 162/399 (40%), Positives = 226/399 (56%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+E+ + AL ++ ++ G+ D+ T +L+ A + L ALE G +H ++K + +D
Sbjct: 1175 YIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLD 1234
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G +L D V+ A+++ LA G ++AL F MQ
Sbjct: 1235 HFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQS 1294
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD +TF+GVL ACSH+GL E +F+ M + YGI P IEHY CLV LGRAGRI
Sbjct: 1295 NGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQ 1354
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE +I +MP + LLGACR + E A+R A +LL L P + +YV+LSN Y+
Sbjct: 1355 EAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYA 1414
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+SR+W V R +M +N+KK PG I+V VH FV
Sbjct: 1415 ASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMK 1474
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ +VP+ L D++EEEKE AL H+EKLAI FGL+S P IR+IKNLRVC
Sbjct: 1475 RIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCG 1534
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+A ISK+ RE V+ D NRFHHF+NG+CSC D+W
Sbjct: 1535 DCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 80/192 (41%), Gaps = 29/192 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y++ + +AL F + G+ D++T+ + + A L L+ G + Y +K D
Sbjct: 1074 YIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNND 1133
Query: 61 VG-----LGMALK-----------------DVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L M +K D + T +I G + AL ++ M++
Sbjct: 1134 LWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRV 1193
Query: 99 RGVKPDAITFVGVLVACS-HAGLVDERISHFNLMSEKYGIRPSIEHY--GCLVYILGRAG 155
GV+PD TF ++ A S L + H N++ Y S++H+ LV + + G
Sbjct: 1194 SGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDY----SLDHFVGTSLVDMYCKCG 1249
Query: 156 RIAKAEELIKNM 167
+ A + + M
Sbjct: 1250 SVQDAYRVFRKM 1261
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 161/399 (40%), Positives = 235/399 (58%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----KN 56
Y + EAL LFRE+Q K L +++T++S+L +C LG+L++G W+H Y K K
Sbjct: 205 YARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKY 264
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
++V+ L M KD +A+IV A G+ K++ F M+
Sbjct: 265 VKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRS 324
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V+PD ITF+G+L ACSH G V+E +F+ M K+GI PSI+HYG +V +L RAG +
Sbjct: 325 ENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLE 384
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A E I +P++ + LL AC H+NL+ AE+ ++++ EL +GG YVILSN Y+
Sbjct: 385 DAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYA 444
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
++KW+ V +R++M +R K PGC IEV+ VVHEF
Sbjct: 445 RNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVK 504
Query: 259 ----AGFVPNKSEVLF-DMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+G+VP+ S V+ +M+++EKE L H+EKLAITFGL++ PG IR++KNLRVC
Sbjct: 505 ELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCR 564
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A +IS ++ R+ V+ D RFHHF++G CSC DFW
Sbjct: 565 DCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 60/136 (44%), Gaps = 22/136 (16%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
E LF E+ G+ D T SLL AC ALE G LH MK ++ +V + L
Sbjct: 112 EVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLI 171
Query: 69 DVMT----------------------LTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
++ T A+I A + N+AL F EMQ + +KP+ I
Sbjct: 172 NMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEI 231
Query: 107 TFVGVLVACSHAGLVD 122
T + VL +C+ G +D
Sbjct: 232 TLLSVLSSCALLGSLD 247
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 161/400 (40%), Positives = 232/400 (58%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------ 54
+ + +EA FRE+ + + ++V++ +L AC GA E G LH ++ K
Sbjct: 241 FAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYV 300
Query: 55 ---KNIEVDV-----GLGMA---------LKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
N +D + MA + +++ T++I LAM G G +A++ F+EM+
Sbjct: 301 GSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEME 360
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV+PD ITF+ +L ACSH+GLV+E F+ M YGI P+IEHYGC+V + GRA R+
Sbjct: 361 ESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARL 420
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA E I MP++ + + LLGAC IH N+E AE +L E+ PDN G +V+LSN Y
Sbjct: 421 QKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLLSNVY 480
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ + KWK V IR M E ++KK PG +IE+D V++ FV
Sbjct: 481 AVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVIYGFVAGEKPNEVTEEAHEKLREIM 540
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+AG+ P VL D++EEEKE +++ H+EKLA FG+ G ++RI+KNLRVC
Sbjct: 541 LRLRTEAGYAPQLRSVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGRILRIVKNLRVC 600
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHT +ISKVY E +V DR+RFH FK+G CSC+D+W
Sbjct: 601 GDCHTVMKLISKVYQVEIIVRDRSRFHSFKDGFCSCRDYW 640
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD-E 123
M L+D ++ + +IV A G ++A +F E+ ++ + ++ GVL AC+ AG +
Sbjct: 226 MPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFG 285
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMA 170
+I H EK G L+ + G +A A + +NMP+A
Sbjct: 286 KILHG--FVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVA 330
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 158/398 (39%), Positives = 226/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + ++AL LF ++Q + L D TMV +L AC LGAL++G+W + + +
Sbjct: 291 YAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSN 350
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG AL KD + A++V L+M G F ++
Sbjct: 351 PVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEK 410
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD TF+G+L C+H G V+E FN M + + PSIEHYGC+V +LGRAG +
Sbjct: 411 HGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLN 470
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI NMPM + V G LLG C++H + AE+ ++L+EL P N G+YV LSN YS
Sbjct: 471 EAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYS 530
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ +W++ ++IR M E+ I+K C IE+DG+VHEF+
Sbjct: 531 GNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGR 590
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G VP VLFD++EEEKE L H+EKLA+ FGL++ P +IR++KNLRVC D
Sbjct: 591 ELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGD 650
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A +ISK+ RE ++ D NRFH F +GSCSC+D+W
Sbjct: 651 CHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 23/189 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI----MKKN 56
Y+ EA+ F+++ GL D ++V +L AC LG G W+ YI M +N
Sbjct: 190 YISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRN 249
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ V L M KD+++ + +I A G +AL+ F++MQ
Sbjct: 250 VFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQS 309
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+KPD T VGVL AC+ G +D I +LM + + L+ + + G +
Sbjct: 310 ENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTA-LIDMYSKCGSVT 368
Query: 159 KAEELIKNM 167
+A E+ M
Sbjct: 369 QAWEIFTAM 377
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 22/140 (15%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V ++A+ L+ ++ G + T+ +L AC + +G+ +H ++K + DV
Sbjct: 90 VSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDV 149
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ +L K+V++ TA+I G +A+ F ++
Sbjct: 150 FVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEM 209
Query: 100 GVKPDAITFVGVLVACSHAG 119
G+KPD+ + V VL AC+ G
Sbjct: 210 GLKPDSFSLVKVLAACARLG 229
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 158/398 (39%), Positives = 226/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + ++AL LF ++Q + L D TMV +L AC LGAL++G+W + + +
Sbjct: 291 YAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSN 350
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG AL KD + A++V L+M G F ++
Sbjct: 351 PVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEK 410
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD TF+G+L C+H G V+E FN M + + PSIEHYGC+V +LGRAG +
Sbjct: 411 HGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLN 470
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI NMPM + V G LLG C++H + AE+ ++L+EL P N G+YV LSN YS
Sbjct: 471 EAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYS 530
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ +W++ ++IR M E+ I+K C IE+DG+VHEF+
Sbjct: 531 GNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGR 590
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G VP VLFD++EEEKE L H+EKLA+ FGL++ P +IR++KNLRVC D
Sbjct: 591 ELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGD 650
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A +ISK+ RE ++ D NRFH F +GSCSC+D+W
Sbjct: 651 CHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 23/189 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI----MKKN 56
Y+ EA+ F+++ GL D ++V +L AC LG G W+ YI M +N
Sbjct: 190 YISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRN 249
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ V L M KD+++ + +I A G +AL+ F++MQ
Sbjct: 250 VFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQS 309
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+KPD T VGVL AC+ G +D I +LM + + L+ + + G +
Sbjct: 310 ENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTA-LIDMYSKCGSVT 368
Query: 159 KAEELIKNM 167
+A E+ M
Sbjct: 369 QAWEIFTAM 377
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 22/140 (15%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V ++A+ L+ ++ G + T+ +L AC + +G+ +H ++K + DV
Sbjct: 90 VSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDV 149
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ +L K+V++ TA+I G +A+ F ++
Sbjct: 150 FVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEM 209
Query: 100 GVKPDAITFVGVLVACSHAG 119
G+KPD+ + V VL AC+ G
Sbjct: 210 GLKPDSFSLVKVLAACARLG 229
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/395 (40%), Positives = 231/395 (58%), Gaps = 46/395 (11%)
Query: 4 DSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL 63
D E+L+LF ++ +G+ DKV MV+++ AC LGA+ + + YI++ +DV L
Sbjct: 179 DCNAYESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVIL 238
Query: 64 GMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV 101
G A+ K+V++ +A+I G+G A++ F+ M +
Sbjct: 239 GTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAI 298
Query: 102 KPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAE 161
P+ +TFV +L ACSHAGL++E + FN M E++ +RP ++HY C+V +LGRAGR+ +A
Sbjct: 299 LPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEAL 358
Query: 162 ELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSR 221
LI+ M + D + LLGACRIH +E AE+AA LLEL P N G YV+LSN Y+ +
Sbjct: 359 RLIEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAG 418
Query: 222 KWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------ 257
KW+KV + R++M +R +KK PG IEVD ++F
Sbjct: 419 KWEKVAKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLE 478
Query: 258 KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHT 317
AG+VP+ VL D++EE K+ L H+EKLAI FGL++ G IRI KNLRVC DCHT
Sbjct: 479 MAGYVPDTDFVLQDVEEEVKQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHT 538
Query: 318 ATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ ++S + R +V D NRFHHF +G+CSC D+W
Sbjct: 539 FSKMVSSIMRRSIIVRDANRFHHFNDGTCSCGDYW 573
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 24/176 (13%)
Query: 14 FREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL------ 67
FRE+ G+T D T+ ++ C L++G +H ++K + D + +L
Sbjct: 89 FRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAK 148
Query: 68 ----------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGV 111
KD++T T +I A C ++L F M+ GV PD + V V
Sbjct: 149 CIVVEDAQRLFERMLSKDLVTWTVMIGAYADC-NAYESLVLFDRMREEGVVPDKVAMVTV 207
Query: 112 LVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ AC+ G + R N + G + ++ + + G + A E+ M
Sbjct: 208 VNACAKLGAM-HRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRM 262
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/394 (42%), Positives = 230/394 (58%), Gaps = 53/394 (13%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK-------------- 54
E L +F E+ D T+VS+L AC GAL +G +H Y+ K
Sbjct: 202 EVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALI 261
Query: 55 ------------KNIEVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVK 102
+ I ++GLG + V++ T+LIV LA G G +ALE F M+ +
Sbjct: 262 DLYAKCGSVNDARRIFEEMGLG---RTVVSWTSLIVGLAANGFGKEALELFSLMEREKLV 318
Query: 103 PDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE 162
P IT VGVL ACSH GLVD+ +F+ M E YGI P IEH GC+V +LGRAGR+ +A +
Sbjct: 319 PTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYD 378
Query: 163 LIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRK 222
I MP+ + V LLG+C +H LE + A ++L+EL P + G YV+LSN Y++
Sbjct: 379 YIITMPLEPNAVVWRTLLGSCAMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGM 438
Query: 223 WKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------K 258
W V +R+ M + ++K PG L+E+ V+EFV +
Sbjct: 439 WADVHVLRKTMVKDRVRKNPGHSLVELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRR 498
Query: 259 AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTA 318
G++P S VL D++EEEKETALN H+E+LAI F L+ +PG+ IRIIKNLR+C DCH A
Sbjct: 499 EGYIPRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVA 558
Query: 319 TNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
N+ISKVY+RE +V DR+RFHHF+ G+CSCKD+W
Sbjct: 559 FNLISKVYDREIIVRDRSRFHHFQGGACSCKDYW 592
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 161/390 (41%), Positives = 230/390 (58%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
E+L+LF +++ +G+ DKV MV+++ AC LGA+ + YI +K ++DV LG A+
Sbjct: 472 ESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMI 531
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
K+V++ +A+I GQG KAL+ F M G+ P+ I
Sbjct: 532 DMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKI 591
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
T V +L ACSHAGLV+E + F+LM E Y +R ++HY C+V +LGRAGR+ +A +LI++
Sbjct: 592 TLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIES 651
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
M + D + G LGACR H ++ AE+AA LLEL P N G Y++LSN Y+++ +W+ V
Sbjct: 652 MTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDV 711
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GFV 262
+ R+LM++R +KK PG IEVD H+F G+V
Sbjct: 712 AKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYV 771
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ + VL D+DEE K L H+EKLAI FGL++ IRIIKNLRVC DCHT ++
Sbjct: 772 PDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLV 831
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S + R +V D NRFHHFK G+CSC D+W
Sbjct: 832 SAITGRVIIVRDANRFHHFKEGACSCGDYW 861
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 22/137 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E E+L+LF +++ +G+ DKV MV+++ AC LGA+ + YI +K ++D
Sbjct: 234 YAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLD 293
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG A+ K+V++ +A+I GQG KAL+ F M
Sbjct: 294 VILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLS 353
Query: 99 RGVKPDAITFVGVLVAC 115
G+ PD IT +L AC
Sbjct: 354 SGMLPDKITLASLLYAC 370
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 14 FREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL--GMALKDVM 71
FRE+ G D T+ ++ AC L L++ + + Y+ + IE L M +D++
Sbjct: 167 FRELIRCGARPDNYTLPFVIRACRDLKNLQMAL-VDMYVKCREIEDARFLFDKMQERDLV 225
Query: 72 TLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
T T +I A CG+ N++L F +M+ GV PD + V V+ AC+ G
Sbjct: 226 TWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLG 273
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 64/161 (39%), Gaps = 50/161 (31%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLAC-----------THLGALEVGMW---------L 48
+AL LFR + G+ DK+T+ SLL AC H A GM +
Sbjct: 343 KALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLV 402
Query: 49 HPYIMKKNIEVDVGL--GMALKDVMTLTALI----------------------------V 78
H Y + ++ GL GM ++D ++ + ++
Sbjct: 403 HFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNY 462
Query: 79 VLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
L CG N++L F +M+ GV PD + V V+ AC+ G
Sbjct: 463 TLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLG 503
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/390 (42%), Positives = 226/390 (57%), Gaps = 46/390 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL LF +Q +G+ + V+M+S+L ACT LGAL+ G W H YI + I++
Sbjct: 223 YAQVGESREALNLFHLMQLEGVKVNGVSMISVLSACTQLGALDQGRWAHSYIERNKIKIT 282
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG L K+V T ++ + LAM G G K L+ F M+
Sbjct: 283 VRLGTTLVDLYAKCGDMDKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQ 342
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV P+A+TFV VL CS G VDE HF+ M ++GI P ++HYGCLV + RAGR+
Sbjct: 343 DGVTPNAVTFVSVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLE 402
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A +I+ MPM V LL A R++ NLE A++++LEL N G+YV+LSN Y+
Sbjct: 403 DAVSIIQQMPMKAHAAVWSSLLHASRMYKNLELGVLASKKMLELETSNHGAYVLLSNIYA 462
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
S W V +R+ M + ++K PGC ++EV+G VHEF
Sbjct: 463 DSDDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYNEIDAVWKDISR 522
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+ + + V+FD+DEEEKE AL LH+EK AI FG++S V IRI+KNLRVC D
Sbjct: 523 RLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKADVPIRIVKNLRVCGD 582
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNG 344
CH + +ISK++NRE +V DRNRFHHFK+G
Sbjct: 583 CHQVSMMISKIFNREIIVRDRNRFHHFKDG 612
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 141/401 (35%), Positives = 211/401 (52%), Gaps = 51/401 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
++++ EE L F + GL D+ T +++L C +G + + +H IM +
Sbjct: 713 HLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNAN 772
Query: 61 VGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL D+ M TA++ A G G A+++F M
Sbjct: 773 TCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVH 832
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD +TF +L ACSH+GLV+E +F MS++Y I P ++HY C+V ++GR+G +
Sbjct: 833 YGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQ 892
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A LIK MPM V G LLGACR++ + + +AA++L EL P +G +Y++LSN YS
Sbjct: 893 DAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYS 952
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+S WK RIR LM ++ + + G IE +H+FV
Sbjct: 953 ASGLWKDASRIRNLMKQKGLVRASGYSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRK 1012
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGL--VSPMPGVLIRIIKNLRV 311
+ GF VL D+DE+ KE +N H+EK+A+ FGL +SPM ++IR KNLR+
Sbjct: 1013 KMKSELGFKSRTEFVLHDVDEDVKEEMINQHSEKIAMAFGLLVISPMEPIIIR--KNLRI 1070
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH IS + R ++ D RFHHF GSCSC+D+W
Sbjct: 1071 CGDCHETAKAISLIEKRRIIIRDSKRFHHFLEGSCSCRDYW 1111
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 64 GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE 123
GM KD + A+I A G+ +AL F+ MQ+ GVK + ++ + VL AC+ G +D+
Sbjct: 207 GMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSMISVLSACTQLGALDQ 266
Query: 124 -RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
R +H + E+ I+ ++ LV + + G + KA E+ M
Sbjct: 267 GRWAHSYI--ERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGM 309
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 22/123 (17%)
Query: 21 GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL----------------- 63
G ++VT +S++ AC H G E G+ +H +MK + +V +
Sbjct: 632 GFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISS 691
Query: 64 -----GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHA 118
+++K++++ +IV+ G + L YF + G+KPD TF+ VL C
Sbjct: 692 CKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDI 751
Query: 119 GLV 121
G+V
Sbjct: 752 GVV 754
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 231/398 (58%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + ++AL L+RE++ + D TMVS+L AC+ +GAL VG +H ++ +E+D
Sbjct: 178 YTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELD 237
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL KDV+T +++I+ LA G G+ AL F M
Sbjct: 238 VKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLS 297
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++P+ +TF+GVL++C+H GLV + +F+ MS +G+ P ++HYGC+V +LGR+G I
Sbjct: 298 EGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIE 357
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A++LI++MP D + LLGACRI+ N+E AE A +L L P G YV+LSN Y+
Sbjct: 358 EAKQLIRDMPFEPDAVIWRALLGACRIYKNVEVAEEAMAKLRVLDPHADGHYVLLSNIYA 417
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ W+ V +R + I++ PG IE +HEF+
Sbjct: 418 QANSWEGVAEMRRTLRRERIQRIPGRSSIEWQNTIHEFISGDRSHPRSKEIYKMLGEMMD 477
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+ P VL D+DE+ KE AL H+EKLA+ FGL++ G +RI KNLR C D
Sbjct: 478 RLRQAGYKPMTGLVLQDIDEQSKERALAEHSEKLAVAFGLLTTPAGSTLRITKNLRACED 537
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A +I+ +Y R+ ++ DRNRFHHF G CSCKD+W
Sbjct: 538 CHSAIKLIALLYERKLIIRDRNRFHHFSEGRCSCKDYW 575
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Query: 48 LHPYIMKKNIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+H Y + +++ +V GM +D + ++++ + ALE + EM+ V PD
Sbjct: 144 IHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMRAACVNPDC 203
Query: 106 ITFVGVLVACSHAG--LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
T V VL ACS G V + F E G+ ++ L+ + + G I + +
Sbjct: 204 TTMVSVLSACSDMGALAVGAEVHQF---VESNGVELDVKLGTALIDMYAKCGDIENSVRV 260
Query: 164 IKNMPM 169
+MP+
Sbjct: 261 FHSMPV 266
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 160/399 (40%), Positives = 236/399 (59%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKG-LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ EA LF ++ +G + + VT+ ++LLAC H GAL++G +H ++K +E
Sbjct: 274 YAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELED 333
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
++ +G ++ K+V + T ++ M G G +A++ FYEM
Sbjct: 334 NLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMI 393
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G+KP+ ITFV VL ACSHAGL+ E FN M ++ + P IEHY C+V +LGRAG +
Sbjct: 394 RCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYL 453
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A LI+ M + D V G LLGACRIH N+E E +A++L +L P N G YV+LSN Y
Sbjct: 454 KEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIY 513
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ + +W V+R+R LM + K PG ++E G VH F+
Sbjct: 514 ADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELN 573
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ G++PN + VL+D+D EEK L +H+EKLA+ FG+++ +PG +I+IIKNLR+C
Sbjct: 574 VKLQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICG 633
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A +ISK+ NRE V+ D RFHHFK+G CSC D+W
Sbjct: 634 DCHFAIKLISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 34/153 (22%)
Query: 1 YVEDSACEEALLLFRE-----------VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLH 49
YV++ EA+ LF+E + G+ D V + ++ AC + V +H
Sbjct: 162 YVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVH 221
Query: 50 PYIMKKNIEVDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGN 87
+KK E + +G L DV + +LI V A G
Sbjct: 222 GLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSV 281
Query: 88 KALEYFYEMQIRG-VKPDAITFVGVLVACSHAG 119
+A F +M RG V+ +A+T VL+AC+H+G
Sbjct: 282 EAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSG 314
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 161/393 (40%), Positives = 233/393 (59%), Gaps = 49/393 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EAL +F + KG++ ++ T+ S L AC +L AL+ G W+H YI K NI+++ L L
Sbjct: 217 EALDIFHNMLAKGMSPNEYTLASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLI 276
Query: 69 D------------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
D V A+I A+ G+ +A+E F +M+I V P+
Sbjct: 277 DMYAKCGELEFASKLFNSNPRLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPN 336
Query: 105 AITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+TFV +L ACSH V+E +F M+ Y ++P +EHYGCLV +LGRAGR+ +AEE+I
Sbjct: 337 KVTFVALLNACSHGNRVEEGRYYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEII 396
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWK 224
+M + D + G LL AC+IH + E ER + + EL P++ G +V+L+N YS + W
Sbjct: 397 SSMHLTPDVAIWGALLSACKIHKDAEMGERVGKIVKELDPNHLGCHVLLANIYSLTGNWN 456
Query: 225 KVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------------AG 260
+ + +RE +AE KK PGC IE++G+ H+F+ AG
Sbjct: 457 EARTLREKIAESGKKKTPGCSSIELNGMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIAG 516
Query: 261 FVPNKSEVLFDMDE-EEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
++P EVL D+D+ E++ETAL H+EKLAI FGL++ P IRI+KNLRVC+DCH A
Sbjct: 517 YIPESGEVLLDIDDNEDRETALLKHSEKLAIAFGLMNTTPKTPIRIVKNLRVCSDCHLAI 576
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISKVY+RE +V DR R+HHFK+G+CSC D+W
Sbjct: 577 KFISKVYDREIIVRDRIRYHHFKDGTCSCNDYW 609
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 164/399 (41%), Positives = 227/399 (56%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + E L +FRE+ D T+VS+L AC +G L +G +H ++ K + +
Sbjct: 200 FAANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTACAEIGVLALGRRVHVFVAKVGLVGN 259
Query: 61 VGLGMALKD-----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQ 97
G AL D V++ T+LIV LA+ G G AL+ F M+
Sbjct: 260 AHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWTSLIVGLAVNGFGMDALQLFSMME 319
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+ P IT VGVL ACSH GLVD+ +F+ M +YGI P IEH GC+V +LGRAGR+
Sbjct: 320 REKLMPTEITMVGVLYACSHCGLVDDGFRYFDQMKAEYGITPRIEHLGCMVDLLGRAGRV 379
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A I MP+ + V LLGAC +H LE E A +L+EL P + G YV+LSN Y
Sbjct: 380 EEAHNYITTMPLEPNAVVWRTLLGACAMHKKLEIGEAAWARLVELDPGHSGDYVLLSNLY 439
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ +W V +R+ M ++K PG L+E+ V+EFV
Sbjct: 440 AGVGRWADVHVLRKTMVTHGVRKNPGHSLVELRNSVYEFVMGDRSHPETDQIYEMLGDIA 499
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ G++P+ S VL D+++EEKE+ALN H+E+LAI F L+ +PG IRI+KNLRVC
Sbjct: 500 ERLRRQGYIPHTSNVLADIEDEEKESALNYHSERLAIAFALLKSLPGTPIRIVKNLRVCG 559
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A +ISKVY+RE +V DR+RFHHFK G+CSCKD+W
Sbjct: 560 DCHMAIKLISKVYDREIIVRDRSRFHHFKGGACSCKDYW 598
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 162/391 (41%), Positives = 232/391 (59%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
+A+ +F + G T+VS+L A + L L G W+H Y+ K E+D LG +L
Sbjct: 241 DAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLI 300
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
K V TA+IV L + G N AL F EM G+KP+AI
Sbjct: 301 EMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAI 360
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
F+GVL AC+HAGLVD+ +F++M +Y I P++EHYGCLV IL RAG + +A+ I+N
Sbjct: 361 IFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIEN 420
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP++ + + LLG R H ++ E AAQ+++E+ P+ G Y++LSN Y++S W+KV
Sbjct: 421 MPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKV 480
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GFV 262
+RE+M +R +K PGC +E G +HEF+ G V
Sbjct: 481 SHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHV 540
Query: 263 PNKSEVLFDMD-EEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P+ ++VL ++ E+EKE L H+E+LAI FGL++ PG+ IRI+KNLRVCNDCH+ T +
Sbjct: 541 PDTTQVLLCIEGEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKL 600
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+SK+Y+RE +V D RFHHFKNGSCSC D+W
Sbjct: 601 LSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 631
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 87/219 (39%), Gaps = 43/219 (19%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YVE+ + ++LF E+ H+ L D T+ ++ C LG ++ G +H +K D
Sbjct: 91 YVENQFSHDGIVLFHELVHEYLP-DNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSD 149
Query: 61 VGL----------------------GMALKDV-----------MTLTALIVVLAMCGQGN 87
V + GM KDV ++ A+I G +
Sbjct: 150 VFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFD 209
Query: 88 KALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCL 147
ALE FY+M I D +T+ ++ G + + F +M K G RPS + L
Sbjct: 210 SALELFYQMPIW----DLVTWNLMIAGYELNGQFMDAVKMFFMML-KLGSRPS---HATL 261
Query: 148 VYILGR-AGRIAKAEELIKNMPMALDHFVLGGLLGACRI 185
V +L +G + + M + F L G+LG I
Sbjct: 262 VSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLI 300
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 158/398 (39%), Positives = 233/398 (58%), Gaps = 48/398 (12%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE--- 58
V S EAL+LFRE+Q KGL VT++S+L AC LGALE+G W+H Y+ K ++
Sbjct: 219 VRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALLGALELGRWIHEYVRKVQLDSLV 278
Query: 59 -------------------VDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ V GM +D + +IV A G +A+ F EM+ +
Sbjct: 279 KVNTALIDMYGKCGSLEDAISVFQGMESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQ 338
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G+KPD +TF+GVL ACSH+GLV E + +F+ M E +G+ P I+HYGC+ +L R+G++ +
Sbjct: 339 GIKPDDVTFLGVLYACSHSGLVSEGLQYFDSMRE-FGLVPGIKHYGCVADLLARSGQLDR 397
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A E I +P+ + LL AC + + ++ +++LEL +GG YVI SN ++
Sbjct: 398 AYEFIDELPIKPTAILWRTLLSACGSRGDADLGKQVFERILELDDSHGGDYVIFSNLCAN 457
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK--------------------- 258
+ +W+++ R+R+LM E+ + K PGC IEVD VHEF
Sbjct: 458 TGRWEEMNRVRKLMNEKGVVKVPGCSSIEVDNRVHEFFAGDGRHPKSLDARRMVDGVIEQ 517
Query: 259 ---AGFVPNKSEVL-FDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VPN S V +M EEEK +L H+EKLAI+FGL++ PG +R++KNLRVC D
Sbjct: 518 LKLAGYVPNTSHVFHVEMGEEEKAVSLRYHSEKLAISFGLLNTSPGTTLRVVKNLRVCPD 577
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+ ++S V+NR ++ D NRFHHF++G CSC D+W
Sbjct: 578 CHSMAKLVSMVFNRRIILRDLNRFHHFEDGVCSCGDYW 615
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 22/137 (16%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACT-----------HLGALEVGMWLHPYIMKK- 55
EEA +F + +G+ D T VSLL AC H A++VG H Y++
Sbjct: 124 EEAARVFVRMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHGVAVKVGAAEHEYVLPTL 183
Query: 56 -NIEVDVGLGMALKD---------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
N+ + G A + V++ A+I + +AL F EMQ +G+K +
Sbjct: 184 INMYAECGDARAARTMFGRVDGECVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKLTS 243
Query: 106 ITFVGVLVACSHAGLVD 122
+T + VL AC+ G ++
Sbjct: 244 VTLISVLSACALLGALE 260
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y S EA+ LF E++ +G+ D VT + +L AC+H G + G+ + +
Sbjct: 319 YANHSYGREAISLFEEMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQYFDSMR------E 372
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
GL +K + L LA GQ ++A E+ E+ I KP AI + +L AC G
Sbjct: 373 FGLVPGIKHYGCVADL---LARSGQLDRAYEFIDELPI---KPTAILWRTLLSACGSRGD 426
Query: 121 VD 122
D
Sbjct: 427 AD 428
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 157/398 (39%), Positives = 229/398 (57%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL F E++ G+ D TMVS++ A L W+H I++ ++ +
Sbjct: 425 YAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKN 484
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL D V+T A+I G G AL+ F +M+
Sbjct: 485 IFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKK 544
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V+P+ IT++ V+ ACSH+GLVDE + HF M + YG+ PS++HYG +V +LGRAGRI
Sbjct: 545 GAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIK 604
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I+NMP++ V G GAC+IH N+E E+AA++L EL PD GG +V+L+N Y+
Sbjct: 605 EAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYA 664
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
S+ KW KV +R+ M ++ +KK PGC ++E+ VH F
Sbjct: 665 STSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVY 724
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VP+ + ++ D++++ +E LN H+EKLAI FGL++ PG I + KNLRVC D
Sbjct: 725 EIKAAGYVPD-TNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGD 783
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT IS V RE +V D RFHHFKNG CSC D+W
Sbjct: 784 CHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 70/136 (51%), Gaps = 22/136 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ E+A+ +F ++ +G+ VT++ L AC LG LE G ++H ++ + N+ D
Sbjct: 324 YVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSD 383
Query: 61 VGLGMAL-------------KDV---------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + +L D+ ++ A+I+ A G+ ++AL F EM+
Sbjct: 384 ISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKS 443
Query: 99 RGVKPDAITFVGVLVA 114
G+KPD+ T V V+ A
Sbjct: 444 LGMKPDSFTMVSVIPA 459
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 82/189 (43%), Gaps = 23/189 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----KN 56
+ ++ ++AL L +Q +G D +T+V++L A +G L VG +H Y ++ K
Sbjct: 223 FSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKL 282
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + L GM K V++ +++ G+ KA+ F +M
Sbjct: 283 VNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLE 342
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ P +T + L AC+ G + ER + ++ + I L+ + + R+
Sbjct: 343 EGIDPTGVTIMEALHACADLGDL-ERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVD 401
Query: 159 KAEELIKNM 167
A ++ N+
Sbjct: 402 IASDIFNNL 410
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLV 121
M +D+++ +I + G KALE MQ G +PD+IT V VL A + GL+
Sbjct: 208 MPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLL 264
>gi|357124715|ref|XP_003564043.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Brachypodium distachyon]
Length = 599
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 233/398 (58%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ +AL +F +++ G+ G+ S ++ACT G L G +H ++ + I +D
Sbjct: 202 YVKAGRFLDALEVFDQMRALGIEGNGFVAASAVVACTGAGVLARGREVHRWVEQSGITMD 261
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L A+ D + + +I LA+ G+ A+E F+EM+
Sbjct: 262 EKLATAVVDMYCKCGSVEEAWHVFKVLPTKGLTSWNCMIGGLAVHGRCKDAIELFHEMER 321
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V PD +T V VL AC+H G+V + ++FN + ++YGI P +EHYGC+V + GRAG +
Sbjct: 322 EDVAPDDVTLVNVLTACAHTGMVSDGHNYFNYIVQRYGIEPKMEHYGCMVDLFGRAGLLD 381
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A+++I +MPM D VLG L GAC+IH +L+ E +++EL P N G YV+L+N +
Sbjct: 382 EAKKVIDDMPMEPDIGVLGALFGACKIHRDLDLGEAIGWRVIELDPQNSGRYVLLANLLA 441
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF----------------VK---- 258
S+ +W V ++R LM ERN+ K G +IE+DG V EF VK
Sbjct: 442 SAGQWVDVAKVRRLMDERNVSKEAGRSVIEIDGEVCEFQCGSLCHAQEKEIFAAVKDMMR 501
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G++P+ S+VL D+ EEEKE L H+EKLAI FGL+ PG +RI KNLRVC D
Sbjct: 502 KIRLEGYMPDTSDVLHDITEEEKEVPLQYHSEKLAIAFGLLRTRPGDTVRITKNLRVCRD 561
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT IS+V+ RE VV DRNRFHHFK+G+CSC+D+W
Sbjct: 562 CHEATKFISRVFEREIVVRDRNRFHHFKDGTCSCRDYW 599
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 162/391 (41%), Positives = 232/391 (59%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
+A+ +F + G T+VS+L A + L L G W+H Y+ K E+D LG +L
Sbjct: 289 DAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLI 348
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
K V TA+IV L + G N AL F EM G+KP+AI
Sbjct: 349 EMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAI 408
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
F+GVL AC+HAGLVD+ +F++M +Y I P++EHYGCLV IL RAG + +A+ I+N
Sbjct: 409 IFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIEN 468
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP++ + + LLG R H ++ E AAQ+++E+ P+ G Y++LSN Y++S W+KV
Sbjct: 469 MPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKV 528
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GFV 262
+RE+M +R +K PGC +E G +HEF+ G V
Sbjct: 529 SHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHV 588
Query: 263 PNKSEVLFDMD-EEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P+ ++VL ++ E+EKE L H+E+LAI FGL++ PG+ IRI+KNLRVCNDCH+ T +
Sbjct: 589 PDTTQVLLCIEGEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKL 648
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+SK+Y+RE +V D RFHHFKNGSCSC D+W
Sbjct: 649 LSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 679
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 32/191 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YVE+ + ++LF E+ H+ L D T+ ++ C LG ++ G +H +K D
Sbjct: 88 YVENQFSHDGIVLFHELVHEYLP-DNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSD 146
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + GM KDV+ +LI A CG+ + AL+ F EM
Sbjct: 147 VFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPE 206
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
R DA ++ ++ S G V+ F+ M + ++ + ++ ++G
Sbjct: 207 R----DAFSWTVLVDGLSKCGKVESARKLFDQMPCR-----NLVSWNAMINGYMKSGDFD 257
Query: 159 KAEELIKNMPM 169
A EL MP+
Sbjct: 258 SALELFYQMPI 268
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 160/392 (40%), Positives = 230/392 (58%), Gaps = 47/392 (11%)
Query: 1 YVEDSACEEALLLFREVQH-KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ +A+ +FR +Q G+ + VT+VS+L AC HLGAL++G W+ +I ++ + +
Sbjct: 170 YAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAHLGALDLGKWIDGFISRREMAL 229
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ LG AL +DV++ + +I LAM G ++A FYEM
Sbjct: 230 GLFLGNALADMYAKCGCITEARRVFNKMEERDVISWSIIICGLAMYGHADEAFGCFYEML 289
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G KP+ + F+G+L AC+HAGLV + ++ FN M ++YG+ P +EHYGC+V +L RAG +
Sbjct: 290 DCGEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLSRAGEL 349
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KAE++I +MPM + + G LLG CRI+ + +R Q +LEL D+ GSYV L+N Y
Sbjct: 350 DKAEDMISSMPMKPNVIIWGALLGGCRIYRDSGRGQRVVQHILELDSDHSGSYVYLANVY 409
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------- 258
SS + + R M E + K PGC IEVD VHEF
Sbjct: 410 SSMGRLDDAAKCRLRMRENGVLKTPGCSWIEVDNTVHEFFMGDLSHPESNKIYSMIRELM 469
Query: 259 -----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
AG+ P V+ +DEEEKE AL++H+EKLAI FGL+S G IR++KNLR+CN
Sbjct: 470 WKMKLAGYKPKTDLVVHSIDEEEKEDALSIHSEKLAIAFGLISTSEGTTIRVVKNLRICN 529
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGS 345
DCH A IIS + RE +V DR+RFHHFK+G+
Sbjct: 530 DCHDAAKIISGIVKREIIVRDRSRFHHFKDGA 561
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 157/392 (40%), Positives = 228/392 (58%), Gaps = 48/392 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EA FRE+Q G+ ++V++ L AC GA+E G LH +I K V + AL
Sbjct: 252 EAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALL 311
Query: 69 D-----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D +++ T++I LAM G G +A++ F+EM+ G++PD
Sbjct: 312 DTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDG 371
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
I F+ +L ACSHAGL+++ +F M + Y I P+IEHYGC+V + GRAG++ KA E I
Sbjct: 372 IAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFII 431
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MP+ + LLGAC IH N++ AER ++L EL P+N G +V+LSN Y+ + KWK
Sbjct: 432 HMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLSNIYAVAGKWKD 491
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEF-------------------------VKAG 260
V +R M ++ + K PG +IEVD +++ F V+
Sbjct: 492 VAAVRRSMTDQRMNKTPGWSMIEVDKIMYSFVAGEVQNSITEEAYEKLKEIMLKLRVEGC 551
Query: 261 FVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATN 320
++P VL D+++EEKE +++ H+EKLA+ FG+ G +IRI+KNLRVC DCHT
Sbjct: 552 YIPEVGSVLHDIEDEEKEDSVSRHSEKLAVAFGIARLCKGSIIRIVKNLRVCRDCHTVMK 611
Query: 321 IISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ISKVY E VV DR+RFH FK GSCSC+D+W
Sbjct: 612 LISKVYGLEIVVRDRSRFHSFKTGSCSCRDYW 643
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 63 LGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
L M +KD ++ + +IV A G +A +F E+Q G++P+ ++ G L AC+ AG ++
Sbjct: 227 LEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIE 286
Query: 123 -ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
+I H + EK G + L+ + G + A + + MP
Sbjct: 287 FGKILHGFI--EKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMP 331
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 168/390 (43%), Positives = 230/390 (58%), Gaps = 47/390 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LFR++Q G+ D+VTMVS++ AC GAL+ G W+H YI K+ IE D+ L AL
Sbjct: 176 EALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQLIETDLELSTALV 235
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
KD +++IV LA+ G ALE F+ M+ VKP+ +
Sbjct: 236 NMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHV 295
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF+GVL AC+H+GLV E +++ M E +GI PS+E YGC+V +L RA + A L++
Sbjct: 296 TFIGVLSACAHSGLVSEGRRYWSSMLE-FGIVPSMELYGCMVDLLCRASLVEDACTLVET 354
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP++ + + LL C+ NL+ +E AQ+LLEL P N +Y++LSN Y+S +W+K+
Sbjct: 355 MPISPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLELEPHNAENYILLSNLYASMSQWEKM 414
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGFV 262
++R+ M IK PGC IEVDG+VHEFV G
Sbjct: 415 SQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHPEAMEVREILRDISKRVHAVGHQ 474
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P S+VL ++ +EEKE AL H+E+LAI +GL+ + IRI+KNLRVC DCH T II
Sbjct: 475 PGISDVLHNVVDEEKENALCEHSERLAIAYGLLKTKTPMAIRIVKNLRVCGDCHEVTKII 534
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S Y RE +V DR RFH F NGSCSC+DFW
Sbjct: 535 SAEYRREIIVRDRVRFHKFVNGSCSCRDFW 564
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 26/186 (13%)
Query: 8 EEALLLFREVQHKGLTG-DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMA 66
+E ++LFR++ +G + TM +L AC+ + ALE G +H ++K + A
Sbjct: 73 KEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHANVLKSGFGSSPFVETA 132
Query: 67 L----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
L ++++ + +I A G N+AL F +MQ GV PD
Sbjct: 133 LVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPD 192
Query: 105 AITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
+T V V+ AC+ +G +D + H + K I +E LV + + G I +A+E+
Sbjct: 193 EVTMVSVISACAASGALDTGKWVHAYI--NKQLIETDLELSTALVNMYAKCGCIERAKEV 250
Query: 164 IKNMPM 169
MP+
Sbjct: 251 FDAMPV 256
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 303 bits (777), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 166/398 (41%), Positives = 229/398 (57%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V+ + A F+ +Q G+ D++T LL AC AL G LH I + ++ D
Sbjct: 584 FVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCD 643
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G L K+V + T++I A G+G +ALE F +MQ
Sbjct: 644 VVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQ 703
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVKPD ITFVG L AC+HAGL+ E + HF M + + I P +EHYGC+V + GRAG +
Sbjct: 704 EGVKPDWITFVGALSACAHAGLIKEGLHHFESMKD-FNIEPRMEHYGCMVDLFGRAGLLH 762
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E I M + D + G LLGAC++H ++E AE+ AQ+ LEL P++ G YVILSN Y+
Sbjct: 763 EAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYA 822
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVH------------------------ 254
++ WK+V ++R++M +R + K PG IEVDG VH
Sbjct: 823 AAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHM 882
Query: 255 EFVKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
E K G+VP+ VL D+++ EKE AL H+E+LAI +GL+ P I I KNLRVC D
Sbjct: 883 EMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKTPPLTPIVISKNLRVCGD 942
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTAT +ISK+ R+ + D NRFHHFK+G CSC DFW
Sbjct: 943 CHTATKLISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 23/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ + A+ F+ + +G+ D T S+L C ALE+G W+ I++ E D
Sbjct: 483 YVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESD 542
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL +D+++ +I G+ A +YF MQ
Sbjct: 543 LHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQE 602
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVKPD ITF G+L AC+ + E L++E + G L+ + + G I
Sbjct: 603 SGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTG-LISMYTKCGSID 661
Query: 159 KAEELIKNMP 168
A + N+P
Sbjct: 662 DAHLVFHNLP 671
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 22/131 (16%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
++A LF+ ++ +G+ DKV VSLL AC H ALE G +H + + ++ ++ +G AL
Sbjct: 288 KQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTAL 347
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
++V++ TA+I A G+ +A +F +M G++P+
Sbjct: 348 LSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNR 407
Query: 106 ITFVGVLVACS 116
+TF+ +L ACS
Sbjct: 408 VTFMSILGACS 418
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 22/145 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ EEA L ++ G+ DK T V +L AC ++ G L I+ + D
Sbjct: 180 YVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTD 239
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL +D++T T++I LA Q +A F M+
Sbjct: 240 LFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEE 299
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE 123
GV+PD + FV +L AC+H +++
Sbjct: 300 EGVQPDKVAFVSLLKACNHPEALEQ 324
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 75/190 (39%), Gaps = 23/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + EEA L F ++ G+ ++VT +S+L AC+ AL+ G +H I+K D
Sbjct: 382 FAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITD 441
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL ++V+ A+I + + A+ F +
Sbjct: 442 DRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLK 501
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD+ TF +L C + E + + G + LV + G +
Sbjct: 502 EGIKPDSSTFTSILNVCKSPDAL-ELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLM 560
Query: 159 KAEELIKNMP 168
A L +MP
Sbjct: 561 SAMNLFNDMP 570
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 162/399 (40%), Positives = 225/399 (56%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI-----MKK 55
Y + EAL LFR + D+VT+V +L A LG +E G WLH Y+ ++
Sbjct: 226 YTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQL 285
Query: 56 NIEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
N+ V L G+ KD++ A+I AM G KALE F +++
Sbjct: 286 NVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQLR 345
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+G+ P ITF+G+L ACSH+GLV+E S F M +YGI P IEHYGC+V +LGRAG I
Sbjct: 346 DQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEYGIDPKIEHYGCMVDLLGRAGLI 405
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A L++++ + D + LL ACR+H N+ +R A L+ N G Y++LSN Y
Sbjct: 406 EEAFHLVQSLTITPDAVMWVSLLAACRLHKNMALGQRIADFLVANGLANSGMYILLSNIY 465
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
++ KW++V R+R +M I+K PGC IE+D V+EFV
Sbjct: 466 AAVGKWEEVARVRSMMKASGIQKEPGCSAIEIDRKVYEFVAGDMSHPCTDEIYAMLDKMN 525
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G VP VL D+DE KE AL +H+EKLA+ FGL+S PG I+I+KNLR C+
Sbjct: 526 ALVKEHGHVPQTELVLHDLDEATKEKALAVHSEKLAVAFGLISSRPGSTIKIVKNLRACS 585
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH +ISK+ +R+ V DRNRFHHF +GSC+C D+W
Sbjct: 586 DCHAVLKLISKITSRKIVFRDRNRFHHFVDGSCTCGDYW 624
>gi|294464140|gb|ADE77588.1| unknown [Picea sitchensis]
Length = 312
Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 198/312 (63%), Gaps = 24/312 (7%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
M+ K+V++ A+IV M G G AL F +MQ RGVKP+ ITF+ VL ACSHAGLVDE
Sbjct: 1 MSNKNVVSWNAMIVGYGMHGHGEDALVLFTQMQQRGVKPNEITFISVLSACSHAGLVDEG 60
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACR 184
+N M+ Y I P++EHY C+V +LGRAG + +A + I+ MP+ V G LG+CR
Sbjct: 61 WKCYNCMTLDYAITPTVEHYACMVDLLGRAGHLNEAWDFIEKMPIEPGASVWGAFLGSCR 120
Query: 185 IHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGC 244
IH N+E ER A+ LL L PDN G YV+LSN Y+++ +W V ++R++M E+++KK PGC
Sbjct: 121 IHCNIELGERVAELLLNLDPDNAGYYVLLSNIYAAAGRWDDVAKVRKMMKEKDVKKSPGC 180
Query: 245 ILIEVDGVVHEFV------------------------KAGFVPNKSEVLFDMDEEEKETA 280
LIEV+ +H FV G+VP VL D++EE KE
Sbjct: 181 SLIEVNNKLHSFVVGDISHPQTEAIYAMLETLARQMEAVGYVPCTDFVLHDVEEEIKENM 240
Query: 281 LNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHH 340
L H+EKLAI FGL+S G IRI KNLRVC DCH+AT ISK+ RE ++ D NRFHH
Sbjct: 241 LFAHSEKLAIAFGLISTRSGTSIRITKNLRVCGDCHSATKFISKIVKREIIMRDLNRFHH 300
Query: 341 FKNGSCSCKDFW 352
FK+G CSC D+W
Sbjct: 301 FKDGLCSCGDYW 312
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 152/393 (38%), Positives = 228/393 (58%), Gaps = 48/393 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEA FRE+Q KG+ ++ ++ +L AC GALE G LH +I K + V + AL
Sbjct: 251 EEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNAL 310
Query: 68 -----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
+++++ T+++ LAM G G +A+ F++M+ G++PD
Sbjct: 311 LDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPD 370
Query: 105 AITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
I F+ +L ACSHAGLV++ +F+ M Y I PSIEHYGC+V + GRAG++ KA E +
Sbjct: 371 EIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFV 430
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWK 224
MP+ + LLGAC +H +++ AE+ ++L EL P+N +V+LSN Y+ + KWK
Sbjct: 431 CQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLSNAYAVAGKWK 490
Query: 225 KVKRIRELMAERNIKKPPGCILIEVDGVVHEF-------------------------VKA 259
+R M E+ I K PG +IEVD +++ F V+
Sbjct: 491 DAASVRRSMTEQRITKTPGWSMIEVDKIMYTFLAGTKQYKITEEAYKKLKEIIRRLRVEG 550
Query: 260 GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
G+VP VL D++EEEKE ++++H+EKLA+ FG+ G IRI+KNLR+C DCH
Sbjct: 551 GYVPEIGRVLHDIEEEEKEGSVSVHSEKLAVAFGIARLCKGRTIRIVKNLRICRDCHAVM 610
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+IS++Y E VV DR+RFH FK+G CSC+D+W
Sbjct: 611 KLISQIYKVEIVVRDRSRFHSFKDGYCSCRDYW 643
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 63 LGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
L M +KD ++ + +IV A G +A +F E+Q +G++P+ + GVL AC+ AG ++
Sbjct: 227 LEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALE 286
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 303 bits (776), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 165/410 (40%), Positives = 234/410 (57%), Gaps = 58/410 (14%)
Query: 1 YVEDSACEEALLLFREVQH------KG-----LTGDKVTMVSLLLACTHLGALEVGMWLH 49
YV E+ALLL ++Q+ KG L + +T++++L +C L AL G +H
Sbjct: 481 YVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 540
Query: 50 PYIMKKNIEVDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGN 87
Y +K N+ DV +G AL K+V+T +I+ M G G
Sbjct: 541 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 600
Query: 88 KALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCL 147
+A++ M ++GVKP+ +TF+ V ACSH+G+VDE + F +M YG+ PS +HY C+
Sbjct: 601 EAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV 660
Query: 148 VYILGRAGRIAKAEELIKNMPMALDHF-VLGGLLGACRIHDNLEAAERAAQQLLELLPDN 206
V +LGRAGRI +A +L+ MP + LLGA RIH+NLE E AAQ L++L P+
Sbjct: 661 VDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNV 720
Query: 207 GGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------- 257
YV+L+N YSS+ W K +R M E+ ++K PGC IE VH+FV
Sbjct: 721 ASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQS 780
Query: 258 ---------------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVL 302
K G+VP+ S VL +++E+EKE L H+EKLAI FG+++ PG +
Sbjct: 781 EKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTI 840
Query: 303 IRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IR+ KNLRVCNDCH AT ISK+ +RE ++ D RFH FKNG+CSC D+W
Sbjct: 841 IRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 24/134 (17%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLG---ALEVGMWLHPYIMKKN------IE 58
E AL FR + + + T+VS++ AC++L L +G +H Y ++K I
Sbjct: 181 EMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIIN 240
Query: 59 VDVGLGMAL---------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
V + L +D++T ++ L Q +ALEY EM + GV+P
Sbjct: 241 TLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300
Query: 104 DAITFVGVLVACSH 117
D T VL ACSH
Sbjct: 301 DEFTISSVLPACSH 314
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 24/135 (17%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK-NIEVDVGLGMAL 67
EAL RE+ +G+ D+ T+ S+L AC+HL L G LH Y +K +++ + +G AL
Sbjct: 285 EALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSAL 344
Query: 68 KDVMT----------------------LTALIVVLAMCGQGNKALEYFYEM-QIRGVKPD 104
D+ A+I + +AL F M + G+ +
Sbjct: 345 VDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLAN 404
Query: 105 AITFVGVLVACSHAG 119
+ T GV+ AC +G
Sbjct: 405 STTMAGVVPACVRSG 419
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 303 bits (775), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 165/410 (40%), Positives = 234/410 (57%), Gaps = 58/410 (14%)
Query: 1 YVEDSACEEALLLFREVQH------KG-----LTGDKVTMVSLLLACTHLGALEVGMWLH 49
YV E+ALLL ++Q+ KG L + +T++++L +C L AL G +H
Sbjct: 481 YVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 540
Query: 50 PYIMKKNIEVDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGN 87
Y +K N+ DV +G AL K+V+T +I+ M G G
Sbjct: 541 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 600
Query: 88 KALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCL 147
+A++ M ++GVKP+ +TF+ V ACSH+G+VDE + F +M YG+ PS +HY C+
Sbjct: 601 EAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV 660
Query: 148 VYILGRAGRIAKAEELIKNMPMALDHF-VLGGLLGACRIHDNLEAAERAAQQLLELLPDN 206
V +LGRAGRI +A +L+ MP + LLGA RIH+NLE E AAQ L++L P+
Sbjct: 661 VDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNV 720
Query: 207 GGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------- 257
YV+L+N YSS+ W K +R M E+ ++K PGC IE VH+FV
Sbjct: 721 ASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQS 780
Query: 258 ---------------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVL 302
K G+VP+ S VL +++E+EKE L H+EKLAI FG+++ PG +
Sbjct: 781 EKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTI 840
Query: 303 IRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IR+ KNLRVCNDCH AT ISK+ +RE ++ D RFH FKNG+CSC D+W
Sbjct: 841 IRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 24/134 (17%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLG---ALEVGMWLHPYIMKKN------IE 58
E AL FR + + + T+VS++ AC++L L +G +H Y ++K I
Sbjct: 181 EMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIIN 240
Query: 59 VDVGLGMAL---------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
V + L +D++T ++ L Q +ALEY EM + GV+P
Sbjct: 241 TLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300
Query: 104 DAITFVGVLVACSH 117
D T VL ACSH
Sbjct: 301 DEFTISSVLPACSH 314
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 24/140 (17%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK-NIEVDVGLGMAL 67
EAL RE+ +G+ D+ T+ S+L AC+HL L G LH Y +K +++ + +G AL
Sbjct: 285 EALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSAL 344
Query: 68 KDVMT----------------------LTALIVVLAMCGQGNKALEYFYEM-QIRGVKPD 104
D+ A+I + +AL F M + G+ +
Sbjct: 345 VDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLAN 404
Query: 105 AITFVGVLVACSHAGLVDER 124
+ T GV+ AC +G +
Sbjct: 405 STTMAGVVPACVRSGAFSRK 424
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 160/399 (40%), Positives = 233/399 (58%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----KN 56
Y + EAL LFRE+Q K L +++T++S+L +C LG+L++G W+H Y K K
Sbjct: 205 YARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKY 264
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
++V+ L M KD +A+IV A G+ K++ F M+
Sbjct: 265 VKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRS 324
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V+PD ITF+G+L ACSH G V+E +F+ M K+GI PSI+HYG +V +L AG +
Sbjct: 325 ENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLE 384
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A E I +P++ + LL AC H+NL+ AE+ ++++ EL +GG YVILSN Y+
Sbjct: 385 DAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYA 444
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
++KW+ V +R++M +R K PGC IEV+ VVHEF
Sbjct: 445 RNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVK 504
Query: 259 ----AGFVPNKSEVLF-DMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+G+VP+ S V+ +M+++EKE L H+EKLAITFGL++ PG IR++KNLRVC
Sbjct: 505 ELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCR 564
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A +IS ++ R+ V D RFHHF++G CSC DFW
Sbjct: 565 DCHNAAKLISLIFGRKVVXRDVQRFHHFEDGKCSCGDFW 603
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 60/136 (44%), Gaps = 22/136 (16%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
E LF E+ G+ D T SLL AC ALE G LH MK ++ +V + L
Sbjct: 112 EVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLI 171
Query: 69 DVMT----------------------LTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
++ T A+I A + N+AL F EMQ + +KP+ I
Sbjct: 172 NMYTECEDVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEI 231
Query: 107 TFVGVLVACSHAGLVD 122
T + VL +C+ G +D
Sbjct: 232 TLLSVLSSCALLGSLD 247
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 160/398 (40%), Positives = 230/398 (57%), Gaps = 48/398 (12%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI---- 57
V S EAL+LFRE+Q KGL VT++S+L AC LGALE+G W+H Y+ K +
Sbjct: 210 VRSSRPGEALVLFREMQGKGLKPTSVTVISVLSACALLGALELGRWVHDYVRKIGLGSLV 269
Query: 58 ------------------EVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+DV GM KD + +IV A G G +A+ F EM+
Sbjct: 270 KVSTALIDMYAKCGSLEDAIDVFQGMESKDRQAWSVMIVAYANHGYGREAISLFEEMKKE 329
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G+KPD ITF+GVL ACSH+GLV E + +F+ M + +GI P I+HYGC+ +L R+G++ +
Sbjct: 330 GMKPDDITFLGVLYACSHSGLVSEGLQYFDDMKD-HGIVPGIKHYGCVTDLLARSGQLER 388
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A + I +P+ + LL AC H + E +R +++L+L +GG YVI SN ++
Sbjct: 389 AYKFIDELPINPTPILWRTLLSACGGHGDFELGKRVFERILKLDDSHGGDYVIFSNLCAN 448
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA-------------------- 259
+ W+++ +R+LM+E+ + K PGC IE+D VHEF
Sbjct: 449 TGYWEEMNMVRKLMSEKGVVKVPGCSSIEIDNTVHEFFAGDGRHPKSQEARKMVDEVIDQ 508
Query: 260 ----GFVPNKSEVL-FDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VPN S V +M EEEK +L H+EKLAI FGL++ PG +R++KNLRVC D
Sbjct: 509 LKLVGYVPNTSHVFHVEMGEEEKAISLKYHSEKLAIAFGLLNTAPGATLRVVKNLRVCPD 568
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+ ++S V+NR ++ D NRFHHF+ G CSC D+W
Sbjct: 569 CHSMAKLVSMVFNRRIILRDLNRFHHFEEGICSCGDYW 606
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 22/140 (15%)
Query: 5 SACEEALLLFREVQHKGLTGDKVTMVSLLLACT-----------HLGALEVGMWLHPYIM 53
S A+ +F + +G+ D T VSLL AC H A+++G H Y+
Sbjct: 112 SEAAAAVRVFVRMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHALAVKLGAADHDYVR 171
Query: 54 KK--NIEVDVGLGMALKD---------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVK 102
N+ + G A + V++ A+I + +AL F EMQ +G+K
Sbjct: 172 PTLINMYAECGDARAARVMFGGTDGGCVVSYNAMIAAAVRSSRPGEALVLFREMQGKGLK 231
Query: 103 PDAITFVGVLVACSHAGLVD 122
P ++T + VL AC+ G ++
Sbjct: 232 PTSVTVISVLSACALLGALE 251
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y EA+ LF E++ +G+ D +T + +L AC+H G + G+ + D
Sbjct: 310 YANHGYGREAISLFEEMKKEGMKPDDITFLGVLYACSHSGLVSEGLQYFDDMK------D 363
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
G+ +K +T L LA GQ +A ++ E+ I P I + +L AC G
Sbjct: 364 HGIVPGIKHYGCVTDL---LARSGQLERAYKFIDELPI---NPTPILWRTLLSACGGHG 416
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/410 (40%), Positives = 234/410 (57%), Gaps = 58/410 (14%)
Query: 1 YVEDSACEEALLLFREVQH------KG-----LTGDKVTMVSLLLACTHLGALEVGMWLH 49
YV E+ALLL ++Q+ KG L + +T++++L +C L AL G +H
Sbjct: 394 YVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 453
Query: 50 PYIMKKNIEVDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGN 87
Y +K N+ DV +G AL K+V+T +I+ M G G
Sbjct: 454 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 513
Query: 88 KALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCL 147
+A++ M ++GVKP+ +TF+ V ACSH+G+VDE + F +M YG+ PS +HY C+
Sbjct: 514 EAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV 573
Query: 148 VYILGRAGRIAKAEELIKNMPMALDHF-VLGGLLGACRIHDNLEAAERAAQQLLELLPDN 206
V +LGRAGRI +A +L+ MP + LLGA RIH+NLE E AAQ L++L P+
Sbjct: 574 VDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNV 633
Query: 207 GGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------- 257
YV+L+N YSS+ W K +R M E+ ++K PGC IE VH+FV
Sbjct: 634 ASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQS 693
Query: 258 ---------------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVL 302
K G+VP+ S VL +++E+EKE L H+EKLAI FG+++ PG +
Sbjct: 694 EKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTI 753
Query: 303 IRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IR+ KNLRVCNDCH AT ISK+ +RE ++ D RFH FKNG+CSC D+W
Sbjct: 754 IRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 803
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 24/134 (17%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLG---ALEVGMWLHPYIMKKN------IE 58
E AL FR + + + T+VS++ AC++L L +G +H Y ++K I
Sbjct: 94 EMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIIN 153
Query: 59 VDVGLGMAL---------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
V + L +D++T ++ L Q +ALEY EM + GV+P
Sbjct: 154 TLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 213
Query: 104 DAITFVGVLVACSH 117
D T VL ACSH
Sbjct: 214 DEFTISSVLPACSH 227
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 24/135 (17%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK-NIEVDVGLGMAL 67
EAL RE+ +G+ D+ T+ S+L AC+HL L G LH Y +K +++ + +G AL
Sbjct: 198 EALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSAL 257
Query: 68 KD----------------------VMTLTALIVVLAMCGQGNKALEYFYEM-QIRGVKPD 104
D + A+I + +AL F M + G+ +
Sbjct: 258 VDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLAN 317
Query: 105 AITFVGVLVACSHAG 119
+ T GV+ AC +G
Sbjct: 318 STTMAGVVPACVRSG 332
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 163/398 (40%), Positives = 231/398 (58%), Gaps = 47/398 (11%)
Query: 2 VEDSACEEALLLFREVQ-HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
V+ S EEA+ +F +Q +G+ D VTM+S+ AC HLGAL++ W++ YI K I++D
Sbjct: 445 VQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLD 504
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG L +DV TA I +AM G +A+E F +M
Sbjct: 505 VRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIE 564
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+G+KPD + FVG L ACSH GLV + F M + +G+ P HYGC+V +LGRAG +
Sbjct: 565 QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLE 624
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI++MPM + + LL ACR+ N+E A AA+++ L P+ GSYV+LSN Y+
Sbjct: 625 EAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYA 684
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
S+ +W + ++R M E+ ++KPPG I++ G HEF
Sbjct: 685 SAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQ 744
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G VP+ S VL D+DE+EK L+ H+EKLA+ +GL+S G IRI+KNLRVC+D
Sbjct: 745 RASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSD 804
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+ SKVYNRE ++ D NRFH+ + G CSC DFW
Sbjct: 805 CHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 94/223 (42%), Gaps = 23/223 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y C EA+LLF + + G++ DK T L AC A G+ +H I+K
Sbjct: 109 YASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK------ 162
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+G A KD+ +L+ A CG+ + A + F EM R V +++ ++ +
Sbjct: 163 --MGYA-KDLFVQNSLVHFYAECGELDSARKVFDEMSERNV----VSWTSMICGYARRDF 215
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE---LIKNMPMALDHFVLG 177
+ + F M + P+ C++ + + E+ I+N + ++ ++
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 178 GLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSS 220
L+ + ++ A+R L + G S + L N +S+
Sbjct: 276 ALVDMYMKCNAIDVAKR-------LFDEYGASNLDLCNAMASN 311
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 22/136 (16%)
Query: 4 DSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL 63
D A + L FR V+ + +T + VTMV ++ AC L LE G ++ +I IEV+ +
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 64 GMALKDV-MTLTALIVV-----------LAMC----------GQGNKALEYFYEMQIRGV 101
AL D+ M A+ V L +C G +AL F M GV
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV 333
Query: 102 KPDAITFVGVLVACSH 117
+PD I+ + + +CS
Sbjct: 334 RPDRISMLSAISSCSQ 349
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 83/223 (37%), Gaps = 59/223 (26%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------ 54
YV EAL +F + G+ D+++M+S + +C+ L + G H Y+++
Sbjct: 312 YVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW 371
Query: 55 -------------------------------------------KNIEVDVGL----GMAL 67
+N EVD M
Sbjct: 372 DNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR-GVKPDAITFVGVLVACSHAGLVD--ER 124
K++++ +I L +A+E F MQ + GV D +T + + AC H G +D +
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKW 491
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
I ++ EK GI+ + LV + R G A + ++
Sbjct: 492 IYYY---IEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/397 (40%), Positives = 220/397 (55%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
++ + A+ LF+ +Q + + VT+ S+L AC +GAL +G W+H I E +V
Sbjct: 209 TQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNV 268
Query: 62 GLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ AL D+ +T A+I + G G +AL+ FY+M
Sbjct: 269 YVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSS 328
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
VKP +TF+ VL ACSHAGLV E F+ M +G P EHY C+V ILGRAG++ K
Sbjct: 329 SVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKK 388
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A E IK MP+ V G LLGAC IH + A A+++L EL P+N G YV++SN YS
Sbjct: 389 ALEFIKAMPVEPGPPVWGALLGACMIHKDTNLAHVASEKLFELDPENIGYYVLMSNIYSV 448
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF----------------------- 256
RK+ + +R++ ++ + K PGC LIE+ V H F
Sbjct: 449 ERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQVPHVFTSGDQSHPQSKAIYAELDKLTGK 508
Query: 257 -VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+AGF + VL D++EEEKE + +H+EKLAI FGL+S PG IRIIKNLRVC DC
Sbjct: 509 MTEAGFQTETTTVLHDLEEEEKELTMKVHSEKLAIAFGLISTEPGAEIRIIKNLRVCLDC 568
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H T +SK+ R VV D NRFHHFK+G CSC D+W
Sbjct: 569 HNWTKFLSKITKRVIVVRDANRFHHFKDGLCSCGDYW 605
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/308 (48%), Positives = 200/308 (64%), Gaps = 24/308 (7%)
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISH 127
+D+ A+I AM G G +AL+ F EM+ +GVKP+ ITF+G+L ACSHAGLV E
Sbjct: 337 RDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKL 396
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHD 187
F M +G+ P IEHYGC+V +LGRAG + +A E+IK+MP+ + V G L+ ACR+H
Sbjct: 397 FEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHK 456
Query: 188 NLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILI 247
N + E AA QLLE+ P+N G V++SN Y+++ +W +R+ M +KK PG +I
Sbjct: 457 NPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVI 516
Query: 248 EVDGVVHEFV------------------------KAGFVPNKSEVLFDMDEEEKETALNL 283
EV+G VHEF+ +AG+VP+ S VL ++DEEEKETAL
Sbjct: 517 EVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTY 576
Query: 284 HTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKN 343
H+EKLA+ FGL+S P IRI+KNLRVCNDCH AT ++SK+Y R +V DRNRFHHF+
Sbjct: 577 HSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFRE 636
Query: 344 GSCSCKDF 351
G CSC D+
Sbjct: 637 GYCSCGDY 644
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 20/170 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + AL ++ +++ D S+L AC + ++G +H +++KK ++ D
Sbjct: 134 YTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRD 193
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVK---PDAITFVGVLVACSH 117
V +G AL+++ C A F +M R V P + + C H
Sbjct: 194 VFVG---------NALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGH 244
Query: 118 AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
GL + FN +++K + + GC+ R+ R+ + +L M
Sbjct: 245 LGLARQL---FNGLTQKTVVSWTAMIAGCI-----RSNRLEEGTKLFIRM 286
>gi|226493697|ref|NP_001147320.1| selenium-binding protein-like [Zea mays]
gi|195609890|gb|ACG26775.1| selenium-binding protein-like [Zea mays]
Length = 605
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/400 (40%), Positives = 235/400 (58%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ +AL +F E++ +G+ G+ + ++ACT GAL G +H ++ + I++D
Sbjct: 206 YVKACRFLDALEVFDEMRARGVDGNVFVAATAVVACTGAGALARGREVHRWVEQSGIQMD 265
Query: 61 V------------------------GLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
L +A K + T +I A+ G+G AL+ F M
Sbjct: 266 EKLATAVVDMYCKCGCVEEAWRVFEALPLAAKGLTTWNCMIGGFAVHGRGQDALKLFGRM 325
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ GV PD +T V VL AC+HAG++ E +FN + ++YGI P +EHYGC+V + GRAGR
Sbjct: 326 EREGVAPDDVTLVNVLTACAHAGMLSEGRHYFNYVPQRYGIEPKMEHYGCMVDLYGRAGR 385
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A+++I++MPM D VLG L GA +IH +++ E +++EL P N G YV+L+N
Sbjct: 386 LEEAKKVIQDMPMEPDVGVLGALFGASKIHGDVDLGEAIGWRVIELDPQNSGRYVLLANL 445
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF-------------------- 256
+++ +W+ V R+R LM ERN+ K G +IEV G V EF
Sbjct: 446 LATAGRWEDVARVRRLMDERNVSKEAGRSVIEVQGEVCEFQCGGLCHPRAEEVYAMASDM 505
Query: 257 ---VKA-GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
++A G+VP+ +VL + EEEKET L H+EKLAI FGL+ PG +RI KNLRVC
Sbjct: 506 MRKIRAEGYVPDTRDVLHAIAEEEKETPLLYHSEKLAIAFGLLHTRPGDTMRITKNLRVC 565
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH AT +S+V+ R+ VV DRNRFHHFK+G CSCKD+W
Sbjct: 566 RDCHEATKFVSRVFERQIVVRDRNRFHHFKDGQCSCKDYW 605
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 156/391 (39%), Positives = 225/391 (57%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
+A FREV+ +G+ ++V++ +L AC GA E G LH ++ K + + AL
Sbjct: 252 DAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALI 311
Query: 69 DV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
D ++ TA+I +AM G G +A+ F EM+ +KPD+I
Sbjct: 312 DTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSI 371
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF+ +L ACSHAGLVD S+F+ M YGI P IEHYGC+V + GRAG++ +A + +
Sbjct: 372 TFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQ 431
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP++ + V LLGAC IH NL A + +QL EL P+N G +V+LSN Y+ + KWK V
Sbjct: 432 MPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSNIYAVAGKWKDV 491
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------------KAGF 261
+R M + +KK PG +IEV+ +++ FV + G+
Sbjct: 492 AALRRSMTHQRLKKTPGWSMIEVNRIIYSFVAGEKQNDIAVEAHQKLREIMSRLRIEGGY 551
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP VL D++ EEKE +++ H+EKLA+ FG+ G IR++KNLR+C DCHT +
Sbjct: 552 VPEVGSVLHDIEVEEKEDSVSQHSEKLAVAFGMAKLPRGRAIRVVKNLRICRDCHTVMKL 611
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISKVY E VV DR+RFH F +GSCSC+D+W
Sbjct: 612 ISKVYEVEIVVRDRSRFHSFTHGSCSCRDYW 642
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 60 DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
+V + M LKD ++ + +IV A G N A +F E++ G++P+ ++ GVL AC+ AG
Sbjct: 224 EVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAG 283
Query: 120 LVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ RI H EK G I L+ + G + A + NM
Sbjct: 284 AFEFGRILHG--FVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNM 330
>gi|298205169|emb|CBI17228.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 156/390 (40%), Positives = 232/390 (59%), Gaps = 51/390 (13%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
E++LL+ G+ + +T+VS LLACT +GAL+VG +H Y+ +++ G+G AL
Sbjct: 206 ESILLW-----NGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALV 260
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
KD++T + +I A+ G ++AL+ F +M+ G+ PD +
Sbjct: 261 DMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEV 320
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
F+ +L ACSH+G VD+ ++ F M Y I P+++HY +V +LGRAGR+ +A I++
Sbjct: 321 IFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQS 380
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP+ D + G L ACR H N+E AE A++LL+L P + GSYV LSN Y++ +W+ V
Sbjct: 381 MPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDV 440
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGFV 262
+R+R LM R ++K PG IEV+G VH FV + G++
Sbjct: 441 ERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYM 500
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P + VL +++EEEKE AL H+EKLA+ FGL+S PG IRI+KNLRVC DCH+
Sbjct: 501 PETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYA 560
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SK+ RE ++ D RFHHFK+G+CSC D+W
Sbjct: 561 SKLSRREIILRDIKRFHHFKDGTCSCGDYW 590
>gi|194696956|gb|ACF82562.1| unknown [Zea mays]
gi|413957085|gb|AFW89734.1| selenium-binding protein-like protein [Zea mays]
Length = 605
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 161/400 (40%), Positives = 235/400 (58%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ +AL +F E++ +G+ G+ + ++ACT GAL G +H ++ + I++D
Sbjct: 206 YVKACRFLDALEVFDEMRARGVDGNVFVAATAVVACTGAGALARGREVHRWVEQSGIQMD 265
Query: 61 V------------------------GLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
L +A K + T +I A+ G+G AL+ F M
Sbjct: 266 EKLATAVVDMYCKCGCVEEAWRVFEALPLAAKGLTTWNCMIGGFAVHGRGEDALKLFGRM 325
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ GV PD +T V VL AC+HAG++ E +FN + ++YGI P +EHYGC+V + GRAGR
Sbjct: 326 EREGVAPDDVTLVNVLTACAHAGMLSEGRHYFNYVPQRYGIEPKMEHYGCMVDLYGRAGR 385
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A+++I++MPM D VLG L GA +IH +++ E +++EL P N G YV+L+N
Sbjct: 386 LEEAKKVIQDMPMEPDVGVLGALFGASKIHGDVDLGEAIGWRVIELDPQNSGRYVLLANL 445
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF-------------------- 256
+++ +W+ V R+R LM ERN+ K G +IEV G V EF
Sbjct: 446 LATAGRWEDVARVRRLMDERNVSKEAGRSVIEVQGEVCEFQCGGLCHPRAEEVYAMARDM 505
Query: 257 ---VKA-GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
++A G+VP+ +VL + EEEKET L H+EKLAI FGL+ PG +RI KNLRVC
Sbjct: 506 MREIRAEGYVPDTRDVLHAIAEEEKETPLLYHSEKLAIAFGLLHTRPGDTMRITKNLRVC 565
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH AT +S+V+ R+ VV DRNRFHHFK+G CSCKD+W
Sbjct: 566 RDCHEATKFVSRVFERQIVVRDRNRFHHFKDGQCSCKDYW 605
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 156/391 (39%), Positives = 225/391 (57%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LF +Q +G+ + +++S+L C L +L+ G +H +++ + ++D+ + L
Sbjct: 313 EALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLI 372
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
KD++ ++I A G G KALE F+EM G PD I
Sbjct: 373 TMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEI 432
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF+GVL AC + G V E + F M KY + EHY C+V +LGRAG++ +A LI+N
Sbjct: 433 TFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIEN 492
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP+ D V G LL ACR H NL+ AE AA++LL+L P + G Y++LSN Y+S +WK V
Sbjct: 493 MPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDV 552
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------------KAGF 261
+R+ M RN+ K PGC IEVD VH F +AG+
Sbjct: 553 AELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEMIMKKLEKLGASLREAGY 612
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P+ S V+ D+DEE+K +L H+EK+A+ +GL+ G IR++KNLRVC DCH+A +
Sbjct: 613 CPDGSFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPVGKPIRVMKNLRVCGDCHSAIKL 672
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
I++V RE ++ D NRFHHFK+G CSC+DFW
Sbjct: 673 IAQVTGREIILRDANRFHHFKDGLCSCRDFW 703
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 162/399 (40%), Positives = 225/399 (56%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ +EAL LF E+Q+ + D V++ + L AC LGALE G W+H Y+ K I +D
Sbjct: 251 YVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMD 310
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG L K V TALI A G G +A+ F EMQ
Sbjct: 311 SVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQK 370
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KP+ ITF VL ACS+ GLV+E F M Y ++P+IEHYGC+V +L RAG +
Sbjct: 371 MGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIEHYGCVVDLLSRAGLLD 430
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A+ I+ MP+ + + G LL ACRIH N+E E + L+ + P +GG YV +N ++
Sbjct: 431 EAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHA 490
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+KW K R LM E+ + K PGC I ++G HEF+
Sbjct: 491 MGKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWKIMRR 550
Query: 260 -----GFVPN-KSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+VP + +L +D++E+ET ++ H+EKLAIT+GL+ PG IRI+KNLRVC
Sbjct: 551 KLEENGYVPELEDMLLDLVDDDERETIVHQHSEKLAITYGLIKTKPGTTIRIMKNLRVCK 610
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH T +ISK+Y R+ V+ DR RFHHF++G CSC D+W
Sbjct: 611 DCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 649
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E +LLL++ + + T SLL AC++L ALE +H I K E
Sbjct: 126 ERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYE--------- 176
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISH 127
DV + +LI A G A F R KPDA+++ V+ + AG +D ++
Sbjct: 177 NDVYAVNSLINSYAATGNFKLAHLLF----DRIPKPDAVSWNSVIKGYAKAGKMDIALTL 232
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL---IKNMPMALDHFVLGGLLGAC 183
F M EK I + ++ +AG +A +L ++N + D+ L L AC
Sbjct: 233 FRKMVEKNAIS-----WTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSAC 286
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 5 SACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI------- 57
SA EE + ++ G D + SL+ + G ++ L I K +
Sbjct: 158 SALEETTQIHAQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVI 217
Query: 58 -------EVDVGLG----MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
++D+ L M K+ ++ T +I G +AL+ F+EMQ V+PD +
Sbjct: 218 KGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNV 277
Query: 107 TFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGC-LVYILGRAGRIAKAEELI 164
+ L AC+ G +++ + H L + + + GC L+ + + G + +A E+
Sbjct: 278 SLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVL---GCVLIDMYAKCGDMGEALEVF 334
Query: 165 KNM 167
KN+
Sbjct: 335 KNI 337
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 231/398 (58%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EA+ LF+E+ K + D +T+ S +LAC +G+L++ W+ YI K D
Sbjct: 346 YAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRND 405
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL KDV+ +A+IV + G+G A++ FY M+
Sbjct: 406 VFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQ 465
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV P+ +TFVG+L AC+H+GLV+E F+ M + YGI +HY C+V +LGR+G +
Sbjct: 466 AGVCPNDVTFVGLLTACNHSGLVEEGWELFHSM-KYYGIEARHQHYACVVDLLGRSGHLN 524
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I MP+ V G LLGAC+I+ ++ E AA+QL L P N G YV LSN Y+
Sbjct: 525 EAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYA 584
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
SSR W V ++R LM E+ + K G LIE++G + F
Sbjct: 585 SSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLER 644
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AGF+P+ VL D+++EEKE L H+E+LAI +GL+S PG +RI KNLR C +
Sbjct: 645 RLKEAGFIPHIESVLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITKNLRACIN 704
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+AT +ISK+ NRE VV D NRFHHFKNG CSC+D+W
Sbjct: 705 CHSATKLISKLVNREIVVRDANRFHHFKNGVCSCRDYW 742
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL +F +++ + + D + +VS+L A T + LE G +H ++K +E +
Sbjct: 245 YGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFE 304
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L M + +VM A+I A G N+A+ F EM
Sbjct: 305 PDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMIS 364
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
+ ++ D+IT ++AC+ G +D
Sbjct: 365 KNIRTDSITVRSAILACAQVGSLD 388
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 22/128 (17%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV----GL- 63
+A+ ++ +Q G+ D T+ +L AC+ + LEVG +H I + E DV GL
Sbjct: 152 DAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLV 211
Query: 64 -----------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
G+ +++++ T++I G +AL F +M+ R VKPD I
Sbjct: 212 ALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWI 271
Query: 107 TFVGVLVA 114
V VL A
Sbjct: 272 ALVSVLRA 279
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 156/402 (38%), Positives = 226/402 (56%), Gaps = 50/402 (12%)
Query: 1 YVEDSACEEALLLFREV--QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
Y + ++AL LF E+ + G+ + VT++S+L AC L LE G +H + +
Sbjct: 241 YSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLN 300
Query: 59 VDVGLGMAL------------------------KDVMTLTALIVVLAMCGQGNKALEYFY 94
+ + +AL K+++ +I A G G +A+ F
Sbjct: 301 SNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFR 360
Query: 95 EMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRA 154
EM G++PD ITF G+L CSH+GLVD + +FN MS Y I P +EHY C+ +LGRA
Sbjct: 361 EMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRA 420
Query: 155 GRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILS 214
GR+A+A +L+ MPM + G LL ACR H NLE AE AA++L L P+N G+YV+LS
Sbjct: 421 GRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLS 480
Query: 215 NRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV----------------- 257
N Y+ + +W++V ++R ++ + KK PGC IE++G H F+
Sbjct: 481 NMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLE 540
Query: 258 -------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLR 310
AG+ P+ S VL D+ EEEKE L H+EKLA+ FG+++ ++R+ KNLR
Sbjct: 541 ALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLR 600
Query: 311 VCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+C DCHTA IS++Y RE +V D NRFHHFK G CSC D+W
Sbjct: 601 ICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 642
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 156/378 (41%), Positives = 218/378 (57%), Gaps = 47/378 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ EAL LF +Q G+ D +V +L AC LG LE G W+H Y+ NI +
Sbjct: 318 YVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRIT 377
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL K+V+ T +I LAM G+G++ALE F +M+
Sbjct: 378 VFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMER 437
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVKPD I F+G L AC+H GLVD+ F+ M KYGI+P IEHYGC+V +L R G +
Sbjct: 438 LGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLN 497
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E+++ MPM D + G L+ CR H N+E AE + +EL PD G+YV+L N Y+
Sbjct: 498 EAREMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIELEPDKSGAYVLLGNIYA 557
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+S + + IR LM E+ + K PGC +E+ GV+H+F+
Sbjct: 558 ASGRHASAREIRHLMREKGVDKTPGCSTVEIKGVIHQFIVGDLSHPFIEEILSKWDEIDS 617
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ G+VP+K EVL D++EEEKE AL+ H+EK+AI F L++ + IRI+KNLRVC+
Sbjct: 618 RIRLEEGYVPDKKEVLLDIEEEEKENALSRHSEKMAIAFALINTSDDMPIRIVKNLRVCH 677
Query: 314 DCHTATNIISKVYNRETV 331
DCH T +ISKV++ V
Sbjct: 678 DCHHVTKLISKVFDLTVV 695
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE- 123
M ++ ++ +A++ G G +AL F MQ GV+PD VGVL AC+ G++++
Sbjct: 303 MPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQLGVLEQG 362
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ H L + IR ++ LV + + G + A E+ K M
Sbjct: 363 KWVHGYLKANN--IRITVFLGTALVDMYAKCGEMQLAMEVFKVM 404
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 156/402 (38%), Positives = 226/402 (56%), Gaps = 50/402 (12%)
Query: 1 YVEDSACEEALLLFREV--QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
Y + ++AL LF E+ + G+ + VT++S+L AC L LE G +H + +
Sbjct: 278 YSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLN 337
Query: 59 VDVGLGMAL------------------------KDVMTLTALIVVLAMCGQGNKALEYFY 94
+ + +AL K+++ +I A G G +A+ F
Sbjct: 338 SNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFR 397
Query: 95 EMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRA 154
EM G++PD ITF G+L CSH+GLVD + +FN MS Y I P +EHY C+ +LGRA
Sbjct: 398 EMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRA 457
Query: 155 GRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILS 214
GR+A+A +L+ MPM + G LL ACR H NLE AE AA++L L P+N G+YV+LS
Sbjct: 458 GRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLS 517
Query: 215 NRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV----------------- 257
N Y+ + +W++V ++R ++ + KK PGC IE++G H F+
Sbjct: 518 NMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLE 577
Query: 258 -------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLR 310
AG+ P+ S VL D+ EEEKE L H+EKLA+ FG+++ ++R+ KNLR
Sbjct: 578 ALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLR 637
Query: 311 VCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+C DCHTA IS++Y RE +V D NRFHHFK G CSC D+W
Sbjct: 638 ICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 679
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 71/167 (42%), Gaps = 18/167 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E + + + G TGD T +L + L ++ +G +H I++ ++ D
Sbjct: 146 YARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFD 205
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+ + T+LI++ CG+ N A + F M IR D ++ +L + +G
Sbjct: 206 LYVA---------TSLIILYGKCGEINDAGKVFDNMTIR----DVSSWNALLAGYTKSGC 252
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+D ++ F M + +I + ++ ++G +A L M
Sbjct: 253 IDAALAIFERMPWR-----NIVSWTTMISGYSQSGLAQQALSLFDEM 294
>gi|115480819|ref|NP_001064003.1| Os09g0573000 [Oryza sativa Japonica Group]
gi|113632236|dbj|BAF25917.1| Os09g0573000 [Oryza sativa Japonica Group]
Length = 555
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 157/393 (39%), Positives = 219/393 (55%), Gaps = 53/393 (13%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK-NIEVDVGLGMAL 67
+ L LFR ++ T D VT+++LL AC HLGAL W H Y+ + + L AL
Sbjct: 167 QVLRLFRTMR----TADHVTLLALLSACAHLGALHTARWAHAYLATTCSFPITTNLATAL 222
Query: 68 ------------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
KDV T T +I LA+ G AL F M+ ++P
Sbjct: 223 LNMYMRCGDVQTACSLFHSTPTRHKDVHTWTVMIAGLALNGFSTDALHLFTHMKDHNIQP 282
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
D++T VL AC+HAG+VDE M Y ++P+IEHYGC V +LGRAG + +A L
Sbjct: 283 DSVTLTAVLSACTHAGMVDEGKRILRRMPLDYHLQPTIEHYGCTVDLLGRAGLLEEALAL 342
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
I+ +P D + G LL ACR H N E + A ++L L P + G++V LSN Y+++ KW
Sbjct: 343 IRAVPFKADVALWGALLVACRCHRNFEMGQMVAMEILRLDPQHAGAWVFLSNVYAAAGKW 402
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------ 259
V+ +R M + I KPPG ++E+DGVV+EF+
Sbjct: 403 DLVQEVRSSMKQHRIHKPPGSSVVELDGVVYEFLSGDHSHPQSDQIYAMLDEIGKTLSLK 462
Query: 260 GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
G P V FD+DEE+KE ++ H+EKLA+ FGL++ G +IRI+KNLR+C DCH+
Sbjct: 463 GHKPATKLVTFDIDEEDKEVCISQHSEKLAVAFGLINTRRGAVIRIVKNLRICEDCHSVM 522
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
++S+VY+R VV DRNRFHHFK+GSCSC D+W
Sbjct: 523 KVVSEVYDRVIVVRDRNRFHHFKSGSCSCLDYW 555
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 164/398 (41%), Positives = 224/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ E EA LF ++Q +G D + +S+L AC GALE +H + + +EVD
Sbjct: 306 FAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVD 365
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL ++V++ A+I LA G G ALE F M
Sbjct: 366 VRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTA 425
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVKPD +TFV VL ACSHAGLVDE S + M++ YGI P + H C+V +LGRAGR+
Sbjct: 426 HGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLM 485
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A+ I NM + D G LLG+CR + N+E E A++ L+L P N +YV+LSN Y+
Sbjct: 486 EAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYA 545
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ KW V +R +M ER I+K PG IEVD +H+F+ A
Sbjct: 546 EAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIE 605
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G++P+ VL + + ++KE + H+EKLAI +GL+ PG IR+ KNLRVC D
Sbjct: 606 KIKAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCTD 665
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT +ISKV RE +V D NRFHHFK+G CSC D+W
Sbjct: 666 CHGATKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 23/191 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EA L +++ +G + +T VS+L AC GAL+ +H + + +E+D
Sbjct: 205 YAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELD 264
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL +DV++ +I A G+G++A + F +MQ
Sbjct: 265 VRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQT 324
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G KPDAI F+ +L AC+ AG + E + + + G+ + LV++ ++G I
Sbjct: 325 EGCKPDAIMFLSILNACASAGAL-EWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSID 383
Query: 159 KAEELIKNMPM 169
A + M +
Sbjct: 384 DARVVFDRMKV 394
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 131/299 (43%), Gaps = 40/299 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YVE E+A+ LFRE+ H+G+ + T + +L AC L AL+ G +H I +E D
Sbjct: 104 YVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESD 163
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL D+++ T +I A G G +A +M+
Sbjct: 164 VRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQ 223
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G KP+AIT+V +L AC+ G + + + + + G+ + LV + ++G I
Sbjct: 224 EGFKPNAITYVSILNACASEGAL-KWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSID 282
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHD-NLEAAERAAQQLLELLPDNGGSYVILSNRY 217
A + M + D ++GA H EA + Q E + ++ + N
Sbjct: 283 DARVVFDRMKVR-DVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNAC 341
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVD-----GVVHEFVKAGFVPNKSEVLFD 271
+S+ + VK+I + +EVD +VH + K+G + + + V+FD
Sbjct: 342 ASAGALEWVKKIHRHALDSG---------LEVDVRVGTALVHMYSKSGSIDD-ARVVFD 390
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 115/299 (38%), Gaps = 56/299 (18%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL----- 63
EA+++ +GL D V +L C L +H I+K +E + +
Sbjct: 11 EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLL 70
Query: 64 -----------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+ K + A+I A+ F EM GV+P+A
Sbjct: 71 HVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAG 130
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYG--IRPSIEHYG---------CLVYILGRAG 155
T++ +L AC+ +L + K+G + I H G L+ + G+ G
Sbjct: 131 TYMIILKACA------------SLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCG 178
Query: 156 RIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQL-LELLPDNGGSYVILS 214
I +A + N+ M D ++GA N + A R Q+ E N +YV +
Sbjct: 179 SINEARRIFDNL-MNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSIL 237
Query: 215 NRYSSSRKWKKVKRIRE--LMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFD 271
N +S K VKR+ L A + G L+++ + K+G + + + V+FD
Sbjct: 238 NACASEGALKWVKRVHRHALDAGLELDVRVGTALVQM------YAKSGSIDD-ARVVFD 289
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 300 bits (768), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 150/397 (37%), Positives = 228/397 (57%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V++ +E L FR++ + + S++ AC HL L +G LH YI + + ++
Sbjct: 316 VQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENI 375
Query: 62 GLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ M L+D+++ TA+I+ A+ GQ A+E F +M+
Sbjct: 376 FIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETE 435
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G+KP+ + F+ VL ACSH GLVDE +FN M+ +GI P +EHY + +LGRAGR+ +
Sbjct: 436 GIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEE 495
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A + I M + + LL ACR+H N++ AE+ A ++LE+ P+N G+Y++L+N YS+
Sbjct: 496 AYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSA 555
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
+R+WK+ + R M I+K P C IEV V+ F+
Sbjct: 556 ARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVEL 615
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
K G+VP+ SEV D++EE+K+ + H+E+LAI FG+++ G+ IR+ KNLRVC DC
Sbjct: 616 MEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDC 675
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
HTAT ISK+ RE VV D +RFHHFKNG+CSC D+W
Sbjct: 676 HTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 712
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 41/218 (18%), Positives = 84/218 (38%), Gaps = 32/218 (14%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EE L + RE+ L D T+ S+L + G +H +++ ++ D+ + +L
Sbjct: 221 EETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSL 280
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+D ++ ++I G ++ L +F +M + +KP +
Sbjct: 281 IDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKS 340
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKY----GIRPSIEHYGCLVYILGRAGRIAKAE 161
+F ++ AC+H + H Y G +I LV + + G I A+
Sbjct: 341 YSFSSIMPACAHLTTL-----HLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAK 395
Query: 162 ELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQL 199
++ M + D ++ C +H A +Q+
Sbjct: 396 QIFDRMRLR-DMVSWTAMIMGCALHGQAPDAIELFEQM 432
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 164/398 (41%), Positives = 223/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EA+ LF E++ + D MV L +C LGALE+G W + + +
Sbjct: 281 YASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSN 340
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG +L KD + A+I LAM GQ A F +M
Sbjct: 341 PVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGK 400
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ P+ TFVG+L C+HAGLVD+ +FN MS + + P+IEHYGC+V +L RAG +
Sbjct: 401 FGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLD 460
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A LIK MPM + V G LLG CR+H + AE +QL+EL P N G YV+LSN YS
Sbjct: 461 EAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYS 520
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+SR+W + ++IR + E+ ++K PG +EVDGVVHEF+
Sbjct: 521 ASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFK 580
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+ P VLFD++EEEKE L H+EKLA+ F L+S +IR++KNLRVC D
Sbjct: 581 DLKEAGYNPTTEFVLFDVEEEEKEHFLGCHSEKLAVAFALISTGAKYVIRVVKNLRVCGD 640
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ISKV RE V+ D NRFH F +G+CSC+D+W
Sbjct: 641 CHEAIKHISKVTGREIVIRDNNRFHCFSDGACSCRDYW 678
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 22/143 (15%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI----MKKNI 57
+E EA+ LFR + GL D +V +L AC LG LE G W+ + + +N+
Sbjct: 181 IEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNV 240
Query: 58 EVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
V L GM KD++ +A+I A G +A+E F+EM+
Sbjct: 241 FVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKV 300
Query: 100 GVKPDAITFVGVLVACSHAGLVD 122
V+PD VG L +C+ G ++
Sbjct: 301 NVRPDCYAMVGALSSCASLGALE 323
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 22/132 (16%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL------ 63
A+ L+ + + D T +L AC L +G+ +H + K + DV +
Sbjct: 88 AVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVC 147
Query: 64 ----------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
M +K+V++ T +I G+ +A++ F + G++PD
Sbjct: 148 FYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFV 207
Query: 108 FVGVLVACSHAG 119
V VL AC+ G
Sbjct: 208 IVRVLRACARLG 219
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 300 bits (768), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 156/378 (41%), Positives = 218/378 (57%), Gaps = 47/378 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ EAL LF +Q G+ D +V +L AC LG LE G W+H Y+ NI +
Sbjct: 318 YVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRIT 377
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL K+V+ T +I LAM G+G++ALE F +M+
Sbjct: 378 VFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMER 437
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVKPD I F+G L AC+H GLVD+ F+ M KYGI+P IEHYGC+V +L R G +
Sbjct: 438 LGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLN 497
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E+++ MPM D + G L+ CR H N+E AE + +EL PD G+YV+L N Y+
Sbjct: 498 EAREMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIELEPDKSGAYVLLGNIYA 557
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+S + + IR LM E+ + K PGC +E+ GV+H+F+
Sbjct: 558 ASGRHASAREIRHLMREKGVDKTPGCSTVEIKGVIHQFIVGDLSHPFIEEILSKWDEIDS 617
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ G+VP+K EVL D++EEEKE AL+ H+EK+AI F L++ + IRI+KNLRVC+
Sbjct: 618 RIRLEEGYVPDKKEVLLDIEEEEKENALSRHSEKMAIAFALINTSDDMPIRIVKNLRVCH 677
Query: 314 DCHTATNIISKVYNRETV 331
DCH T +ISKV++ V
Sbjct: 678 DCHHVTKLISKVFDLTVV 695
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE- 123
M ++ ++ +A++ G G +AL F MQ GV+PD VGVL AC+ G++++
Sbjct: 303 MPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQLGVLEQG 362
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ H L + IR ++ LV + + G + A E+ K M
Sbjct: 363 KWVHGYLKANN--IRITVFLGTALVDMYAKCGEMQLAMEVFKVM 404
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 300 bits (768), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 158/400 (39%), Positives = 230/400 (57%), Gaps = 53/400 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWL-HPYI------- 52
Y E + E AL LF E+Q+ D+VT+V++L AC LGA ++G L H YI
Sbjct: 111 YAEVNQPESALCLFGEMQNS----DEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQ 166
Query: 53 -----------------MKKNIEVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYE 95
+ +E+ +G +K ++I LA G G A+ F E
Sbjct: 167 NTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRE 226
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
+ G+KPD +TFVGVL AC H+GL++E F M YGI+P +EHYGC+V +LGR G
Sbjct: 227 LISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYG 286
Query: 156 RIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSN 215
+ +A +L++ MP + + LL ACR H N++ E A Q+LLE+ +G YV+LSN
Sbjct: 287 CLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSN 346
Query: 216 RYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------ 257
+ + +W++ +++R++M + I+KPPG IE+ G +H FV
Sbjct: 347 ILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKD 406
Query: 258 ------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
AG+VPN ++V+FD+DEEEKE+ ++ H+EKLA+ FGL+ P IRI+KNLR+
Sbjct: 407 MAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLRI 466
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDF 351
C DCH A ++S++Y RE V D RFHHF+NGSCSC DF
Sbjct: 467 CADCHKAFKLVSEIYGREITVRDTMRFHHFRNGSCSCMDF 506
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 300 bits (767), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 157/398 (39%), Positives = 219/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ E+A+ LFRE+Q + + VT+ +L AC LGAL +G W+H + + E
Sbjct: 395 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL K+ +T +I + GQG +AL FYEM
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 514
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ P +TF+ VL ACSHAGLV E FN M +YG PS++HY C+V ILGRAG +
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I+ M + V LLGACRIH + A +++L EL PDN G +V+LSN +S
Sbjct: 575 RALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHS 634
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ R + + +R+ +R + K PG LIE+ H F
Sbjct: 635 ADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEG 694
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+ P L D++EEE+E + +H+E+LAI FGL++ PG IRIIKNLRVC D
Sbjct: 695 KMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLD 754
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHT T +ISK+ R VV D NRFHHFK+G CSC D+W
Sbjct: 755 CHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 71/190 (37%), Gaps = 28/190 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + E +L LF+E+ G T+VSL+ HL + +H Y +K N
Sbjct: 297 YTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA---IHGYCLKSNFLSH 353
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL K + + A+I G A+ F EMQ
Sbjct: 354 ASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQK 413
Query: 99 RGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
P+ +T +L AC+ G + + H + S + SI L+ + + G I
Sbjct: 414 SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDF--ESSIYVSTALIGMYAKCGSI 471
Query: 158 AKAEELIKNM 167
A+A L M
Sbjct: 472 AEARRLFDLM 481
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/398 (38%), Positives = 233/398 (58%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + E L F ++ G+ ++V+++S+LLAC +LGAL G W H Y+++ E D
Sbjct: 894 YAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFD 953
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + A+ KD++ +A+I + G G KA++ F +M
Sbjct: 954 ILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVK 1013
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+P +TF VL ACSH+GL++E +F LM+E++ I + +Y C+V +LGRAG+++
Sbjct: 1014 AGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLS 1073
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI+NMP+ D + G LLGACRIH+NL+ AE+ A L L P + G +V+LSN Y+
Sbjct: 1074 EAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYA 1133
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
+ +W +V+++R++MA R K G L+E D VH+F
Sbjct: 1134 AKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAA 1193
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VP VL D++EE KE AL+ H+E+LAI FGL++ PG +RI KNLR+C D
Sbjct: 1194 PMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGD 1253
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A +ISK+ NR +V D +RFH F++G CSC D+W
Sbjct: 1254 CHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 1291
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 163/292 (55%), Gaps = 24/292 (8%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK--NIE 58
Y ++ +++ +FR + G+ D V +V +L A + LG + + LH Y+++ N
Sbjct: 383 YAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSN 442
Query: 59 VDVGL--------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEM-Q 97
V VG GM ++DV+ +++I + G+G +ALE F +M +
Sbjct: 443 VFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVK 502
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V+P+ +TF+ +L ACSHAGLV+E + F+ M Y +RP EH+G +V +LGR G++
Sbjct: 503 NSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQL 562
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA ++I MP+ V G LLGACRIH N+E E AA+ L L P + G Y++LSN Y
Sbjct: 563 GKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIY 622
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAG-FVPNKSEV 268
+ KW V +R + ER +KK G ++EV G VH F+ + F P+ ++
Sbjct: 623 AVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKI 674
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 27/239 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + A EAL LF E+ K + VT+VS L AC LE G +H + K E+D
Sbjct: 282 YANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELD 341
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL KDV++ AL+ A G K++ F M
Sbjct: 342 FSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLS 401
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PDA+ V +L A S G+ + + + + G ++ L+ + + G +
Sbjct: 402 DGIQPDAVAVVKILAASSELGIFQQALCLHGYVV-RSGFNSNVFVGASLIELYSKCGSLG 460
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE---LLPDNGGSYVILS 214
A +L K M + D + ++ A IH A Q+++ + P+N ILS
Sbjct: 461 DAVKLFKGM-IVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILS 518
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 23/139 (16%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y +++ EEAL LF + V + D VT+VS++ AC L ++ G +H ++++ +
Sbjct: 180 YQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDG 239
Query: 60 DVGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
D+ L M KDV++ + +I A N+AL F+EM
Sbjct: 240 DLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMI 299
Query: 98 IRGVKPDAITFVGVLVACS 116
+ +P+++T V L AC+
Sbjct: 300 EKRFEPNSVTVVSALQACA 318
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
Query: 1 YVEDSACEEALLLFR-EVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y + EE L LF + G D T+ L AC L LE+G +H + KKN E+
Sbjct: 77 YCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGF-AKKNDEI 135
Query: 60 DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
D+ +AL+ + + CGQ +AL+ F E Q +PD + + ++
Sbjct: 136 G-------SDMFVGSALVELYSKCGQMGEALKVFEEFQ----RPDTVLWTSMVTGYQQNN 184
Query: 120 LVDERISHFNLM 131
+E ++ F+ M
Sbjct: 185 DPEEALALFSQM 196
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 158/374 (42%), Positives = 225/374 (60%), Gaps = 32/374 (8%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EA+ LF E++ GL ++VT+V++L+AC +G L +G +H + + E +
Sbjct: 220 YAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKN 279
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + L D V++ +A+I LA G+ AL F +M
Sbjct: 280 IRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMIN 339
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVKP+A+TF+G+L ACSH G+V++ +F M+ YGI P IEHYGC+V + RAG +
Sbjct: 340 TGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQ 399
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E I NMP+A + V G LLG C++H N++ AE A + L +L P N G YV+LSN Y+
Sbjct: 400 EAHEFIMNMPIAPNGVVWGALLGGCKVHKNVKLAEEATRHLSKLDPLNDGYYVVLSNIYA 459
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFDMDEEEKE 278
+ +W+ V R+R+LM +R + ++ G+VPN S VL DM+E++KE
Sbjct: 460 EAGRWEDVARVRKLMRDRGT----------WEKLLQRMKLKGYVPNTSVVLLDMEEDQKE 509
Query: 279 TALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRF 338
L H+EKLA+ FGL+ PG +IRI+KNLRVC DCH A IIS V RE VV DRNRF
Sbjct: 510 KFLYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRF 569
Query: 339 HHFKNGSCSCKDFW 352
H FKNGSCSC D+W
Sbjct: 570 HCFKNGSCSCGDYW 583
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG--LVD 122
M ++V + T++I A CG+ +A++ F EM+ G+ P+ +T V VLVAC+ G ++
Sbjct: 205 MPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLG 264
Query: 123 ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
RI F S + G +I L+ + + G + A + NM
Sbjct: 265 RRIHDF---SNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNM 306
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 159/405 (39%), Positives = 227/405 (56%), Gaps = 53/405 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIM----KKN 56
Y + EAL LFR++ G+ D+V++V L A LG E G WLH ++ +
Sbjct: 229 YTQHGRPSEALRLFRQMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVANGGRRAR 288
Query: 57 IEVDVGLGMAL-------------------------KDVMTLTALIVVLAMCGQGNKALE 91
+ ++ +G AL +DV+ A+I AM G+ +ALE
Sbjct: 289 VRLNARVGTALVDMYYKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALE 348
Query: 92 YFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYIL 151
F +++ +G+ P ITF+GVL ACSH+GLVDE + F M E+YGI P +EHYGC+V +L
Sbjct: 349 AFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDLL 408
Query: 152 GRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYV 211
GRAGR+ +A +L+++M D + LLGACR+H NL +R A L+ N G+YV
Sbjct: 409 GRAGRVEEAFDLVQSMKAKPDAAMWASLLGACRLHKNLALGQRVADYLVGNGLANSGTYV 468
Query: 212 ILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------ 259
+LSN Y+++ KW++V R+R +M ++K PGC +EV V EFV
Sbjct: 469 LLSNMYAAAGKWREVGRVRSMMRASGVQKEPGCSAVEVGRRVVEFVAGDRSHPRSAEIYA 528
Query: 260 ------------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIK 307
G VP+ VL D+D+ KE AL +H+EKLA+ FGL+S P I+I+K
Sbjct: 529 KLEEVNSIARARGHVPHTELVLHDLDDAAKERALAVHSEKLALAFGLISTPPRTGIKIVK 588
Query: 308 NLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
NLR C DCH ++S+ R+ V DRNRFHHF +GSCSC D+W
Sbjct: 589 NLRACADCHAVLKLVSEATGRKIVFRDRNRFHHFVDGSCSCGDYW 633
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 158/398 (39%), Positives = 228/398 (57%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +A+ FR + G + T+V +L AC+HLGA G W+H +I + ++
Sbjct: 165 YTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLN 224
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL K+V T LI AM GQG+ AL+ F M +
Sbjct: 225 VFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLM 284
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
KPD +TF+GVL AC H GLV E F M +++G++P IEHYGC+V +LGRAG +
Sbjct: 285 ENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLE 344
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A ELI++M + D + LL ACR+H N + E ++L+EL P+NG +YV+LSN YS
Sbjct: 345 EALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYS 404
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
R+W +V ++R +M+ R I+K PGC IE++ VV+EFV +
Sbjct: 405 RERRWAEVGKLRGMMSLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIK 464
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+V L+D+++EEKE ++ H+EKLA+ FGL++ +RI+KNLR+C D
Sbjct: 465 KLKENGYVTGTDMALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLD 524
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH ++S VY R VV DRNRFHHF G CSC+D+W
Sbjct: 525 CHEFFKVLSLVYKRYIVVRDRNRFHHFYEGFCSCRDYW 562
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 154/397 (38%), Positives = 227/397 (57%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V++ +E L F+++ + + V+ S++ AC HL L +G LH YI++ + +V
Sbjct: 313 VQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNV 372
Query: 62 GLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ M L D+++ TA+I+ A+ G A+ F M++
Sbjct: 373 FIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVE 432
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
GVKP+ + F+ VL ACSHAGLVDE +FN M++ Y I P +EHY + +LGR GR+ +
Sbjct: 433 GVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEE 492
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A E I +M + V LL ACR+H N+E AE+ +++L + P N G+YV+LSN YS+
Sbjct: 493 AYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSA 552
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
+ +WK +++R M ++ +KK P C IE+ VH FV
Sbjct: 553 AGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQ 612
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+ G+V + +EVL D++EE+K L H+E+LAITFG++S G IR+ KNLRVC DC
Sbjct: 613 MEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDC 672
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
HTAT ISK+ RE VV D +RFHHFK+G CSC DFW
Sbjct: 673 HTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 709
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 22/132 (16%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E+AL++ RE+ + L D T+ S+L L G +H Y ++ + DV +G +L
Sbjct: 218 EDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSL 277
Query: 68 KDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D+ ++ ++I G ++ L++F +M I +KP+
Sbjct: 278 IDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNH 337
Query: 106 ITFVGVLVACSH 117
++F ++ AC+H
Sbjct: 338 VSFSSIMPACAH 349
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 157/398 (39%), Positives = 232/398 (58%), Gaps = 48/398 (12%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN----I 57
V S EAL+LFRE+Q KGL VT++S+L AC LGAL++G WLH Y+ K +
Sbjct: 210 VRSSRPGEALVLFREMQAKGLNPTPVTVISVLSACALLGALQLGRWLHDYVRKLGLGSLV 269
Query: 58 EVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+V L GM +D + +IV A G G +A+ F EM+ +
Sbjct: 270 KVSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVMIVAYANHGYGREAISLFEEMKKQ 329
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G+KPD ITF+G+L ACSH+GLV E + +F+ M + +GI P I+HYGC+ +L R+G++ +
Sbjct: 330 GMKPDDITFLGLLYACSHSGLVSEGLRYFDDMKD-HGIVPGIKHYGCVTDLLARSGQLER 388
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A + I +P+ + LL AC H ++E +R +++LEL +GG YVI SN ++
Sbjct: 389 AYKFIDELPINPTPILWRTLLSACGGHGDVELGKRVFERILELDDSHGGDYVIFSNLCAN 448
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA-------------------- 259
+ W+++ R+R+LM+++ + K PGC IE+D VHEF
Sbjct: 449 TGYWEEMNRVRKLMSDKGVVKVPGCSSIEIDNTVHEFFAGDGRHPKSQEARKMVDEVIDQ 508
Query: 260 ----GFVPNKSEVL-FDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G++P+ S V +M EEEK +L H+EKLAI FGL++ PG +R++KNLRVC D
Sbjct: 509 LKLVGYIPDTSHVFHVEMGEEEKAISLKYHSEKLAIAFGLLNTAPGATLRVVKNLRVCPD 568
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+ +S V+NR ++ D NRFHHF+ G CSC D+W
Sbjct: 569 CHSMAKFVSMVFNRRIILRDLNRFHHFERGICSCGDYW 606
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 22/129 (17%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACT-----------HLGALEVGMWLHPYIMKKNIEV-- 59
+F + +G+ D T VSLL AC H A+++G H Y+ I +
Sbjct: 120 VFVRMLEEGVAPDTYTFVSLLKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLINMYA 179
Query: 60 --------DVGLGMALKD-VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVG 110
V G A D V++ A+I + +AL F EMQ +G+ P +T +
Sbjct: 180 ECGDARAARVTFGRADGDCVVSYNAMIAAAVRSSRPGEALVLFREMQAKGLNPTPVTVIS 239
Query: 111 VLVACSHAG 119
VL AC+ G
Sbjct: 240 VLSACALLG 248
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y EA+ LF E++ +G+ D +T + LL AC+H G + G+ + D
Sbjct: 310 YANHGYGREAISLFEEMKKQGMKPDDITFLGLLYACSHSGLVSEGLRYFDDMK------D 363
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
G+ +K +T L LA GQ +A ++ E+ I P I + +L AC G
Sbjct: 364 HGIVPGIKHYGCVTDL---LARSGQLERAYKFIDELPI---NPTPILWRTLLSACGGHGD 417
Query: 121 VD 122
V+
Sbjct: 418 VE 419
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 150/397 (37%), Positives = 227/397 (57%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V++ +E L FR++ + + S++ AC HL L +G LH YI + + ++
Sbjct: 377 VQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENI 436
Query: 62 GLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ M L+D+++ TA+I+ A+ G A+E F +M+
Sbjct: 437 FIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTE 496
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G++P+ + F+ VL ACSHAGLVDE +FN M+ +GI P +EHY + +LGRAGR+ +
Sbjct: 497 GIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEE 556
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A + I MP+ V LL ACR+H N++ AE+ A ++LE+ P N G+Y++L+N YS+
Sbjct: 557 AYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSA 616
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
+R+WK+ + R + I+K P C IEV V+ F+
Sbjct: 617 ARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLMEL 676
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
K G+VP+ SEV D++EE+K+ + H+E+LAI FG+++ G IR+ KNLRVC DC
Sbjct: 677 MEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKNLRVCTDC 736
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
HTAT ISK+ RE VV D +RFHHFKNG+CSC D+W
Sbjct: 737 HTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 773
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 89/225 (39%), Gaps = 33/225 (14%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
E L + RE+ L D T+ S+L + G +H +++ ++ +V + +L
Sbjct: 283 ETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLI 342
Query: 69 DVMTLTALIV-------------------VLAMCGQG---NKALEYFYEMQIRGVKPDAI 106
D+ +V ++A C Q ++ L++F +M + +KP +
Sbjct: 343 DMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSY 402
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKY----GIRPSIEHYGCLVYILGRAGRIAKAEE 162
+F ++ AC+H + H Y G +I LV + + G I A +
Sbjct: 403 SFSSIMPACAHLTTL-----HLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQ 457
Query: 163 LIKNMPMALDHFVLGGLLGACRIHDN-LEAAERAAQQLLELLPDN 206
+ M + D ++ C +H + L+A E Q E + N
Sbjct: 458 IFDRMRLR-DMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPN 501
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 160/399 (40%), Positives = 223/399 (55%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIM-KKNIEV 59
Y + EAL LFR + G+ D+VT+V +L A LG +E G WLH Y+ + +++
Sbjct: 494 YTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQL 553
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
V +G AL KD++ A+I AM G KALE F + +
Sbjct: 554 SVRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWNAMINGYAMHGDSRKALEMFVQSR 613
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+G+ P ITF+G+L ACSH+G+V+E F M +YGI P IEHYGC+V +LGRAG I
Sbjct: 614 EQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMEREYGIDPKIEHYGCMVDLLGRAGLI 673
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A L+++M + D + LL ACR+H N+ ++ A L+ N G Y++LSN Y
Sbjct: 674 KEAFCLVQSMKITPDAVMWVSLLAACRLHKNMSLGQQIADYLVAKGLANSGMYILLSNIY 733
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
++ W +V R+R +M I+K PGC IE+D V+EFV
Sbjct: 734 AAVGNWGEVARVRSMMKASGIQKEPGCSSIEIDREVYEFVAGDMSHPRTDEIYVMLDKMN 793
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G VP VL D+DE KE AL +H+EKLA+ FGL+S PG I+I+KNLR C+
Sbjct: 794 GLVKEHGHVPQTELVLHDLDEATKEKALAVHSEKLALAFGLISTQPGATIKIVKNLRACS 853
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH +IS++ R+ V DRNRFHHF +GSCSC D+W
Sbjct: 854 DCHAVLKLISRITGRKIVFRDRNRFHHFVDGSCSCGDYW 892
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%)
Query: 64 GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE 123
G+ KD + A+I G+ N+AL F M GV+PD +T V VL A + G V+
Sbjct: 478 GLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQLGTVES 537
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/399 (41%), Positives = 230/399 (57%), Gaps = 48/399 (12%)
Query: 1 YVEDSACEEALLLFREVQH-KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ EA+ +++ ++ K + ++ T VS+L A H+GAL+ GM +H ++K N+ +
Sbjct: 494 YAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHL 553
Query: 60 DVGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQ 97
DV + L DV +T A+I + G K L+ F EM
Sbjct: 554 DVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEML 613
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GVKPD +TFV +L ACSH+G V+E F LM E YGI+PS++HYGC+V +LGRAG +
Sbjct: 614 DEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYL 672
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
A + IK+MP+ D + G LLGACRIH N+E + A+ +L E+ N G YV+LSN Y
Sbjct: 673 EMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIY 732
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
++ KW+ V ++R L ER +KK PG IEV+ V F
Sbjct: 733 ANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLT 792
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G++P+ S VL D++E+EKE L H+E+LAI FG++S P IRI KNLRVC
Sbjct: 793 AKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCG 852
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH AT IS++ RE VV D NRFHHFK+G CSC D+W
Sbjct: 853 DCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 22/132 (16%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
+++ +AL + E++ +G+ + VT+VS+L C LG + M +H Y++K +E D+
Sbjct: 292 IQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDL 351
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ AL DV++ ++I A +F +MQ+
Sbjct: 352 FVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLN 411
Query: 100 GVKPDAITFVGV 111
G +PD +T V +
Sbjct: 412 GFQPDLLTLVSL 423
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 114/264 (43%), Gaps = 34/264 (12%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN-IEVDVGLGMAL---- 67
F ++Q G D +T+VSL + +H +IM++ + DV +G A+
Sbjct: 404 FFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMY 463
Query: 68 ------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM-QIRGVKPDAITF 108
KDV++ LI A G ++A+E + M + + + P+ T+
Sbjct: 464 AKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTW 523
Query: 109 VGVLVACSHAGLVDERIS-HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
V +L A +H G + + + H ++ K + + CL+ + G+ GR+ A L +
Sbjct: 524 VSILPAYAHVGALQQGMKIHGRVI--KTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQV 581
Query: 168 PMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE--LLPDNGGSYVILSNRYSSSRKWKK 225
P ++ IH + E + ++L+ + PD+ ++V L + S S ++
Sbjct: 582 PQE-SSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDH-VTFVSLLSACSHSGFVEE 639
Query: 226 VKRIRELMAERNIK---KPPGCIL 246
K LM E IK K GC++
Sbjct: 640 GKWCFRLMQEYGIKPSLKHYGCMV 663
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 73/184 (39%), Gaps = 25/184 (13%)
Query: 3 EDSACEEALLLFREVQHKGLTGDKVTMVSLLLAC--------THLGALEVGMWLHPYIMK 54
E C LLL E++ D T +L AC H A ++G + ++
Sbjct: 200 EAIGCFYQLLLVSEIR-----PDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAA 254
Query: 55 KNIEVDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
I + G M +D+ + A+I L G +AL+ EM++ G+K
Sbjct: 255 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 314
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
+ +T V +L C G + + +L K+G+ + L+ + + G + A +
Sbjct: 315 NFVTVVSILPVCPQLGDISTAML-IHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKA 373
Query: 164 IKNM 167
+ M
Sbjct: 374 FQQM 377
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/397 (39%), Positives = 227/397 (57%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V C L + ++ +G+T D TM+S+L C+ L A G +H I K +E DV
Sbjct: 330 VHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDV 389
Query: 62 GLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+G M KDV+T TALI M G+G KA+ F EM+
Sbjct: 390 PVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAA 449
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G+ PD + FV ++ ACSH+GLV+E +++F+ M + Y I P IEHY C+V +L R+ + K
Sbjct: 450 GIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDK 509
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
AE+ I +MP+ D + G LL ACR+ + E AER +++++EL PD+ G YV++SN Y++
Sbjct: 510 AEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAA 569
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF----------------------- 256
KW +V+ IR+ + R +KK PGC +E+ V+ F
Sbjct: 570 LGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGL 629
Query: 257 -VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
K G++ N VL D+DE+EK L H+E+LAI FGL++ PG ++++KNLRVC DC
Sbjct: 630 MAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDC 689
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
HT T ISK+ RE +V D NRFH FK+G+CSC D+W
Sbjct: 690 HTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 726
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 31/189 (16%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG--- 64
EAL L+ E Q L D T S++ AC L E+ +H ++ D+ +G
Sbjct: 97 SEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNAL 156
Query: 65 -------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEM------QIR 99
M L+DV++ +LI G N+ALE +Y+ +
Sbjct: 157 IDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVN 216
Query: 100 GVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
KPD +T +L AC H G ++ + H +++ Y + + L+ + + G +
Sbjct: 217 QFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASN--ILINMYAKCGNLL 274
Query: 159 KAEELIKNM 167
++E+ M
Sbjct: 275 ASQEVFSGM 283
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 27/132 (20%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD-------- 60
+++ LF E+ ++ D +T+ S+L AC HLG LE G ++H Y++ E D
Sbjct: 206 QSIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILI 264
Query: 61 --------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
V GM KD ++ ++I V G+ +L+ F M+ R D I
Sbjct: 265 NMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKAR----DII 320
Query: 107 TFVGVLVACSHA 118
T+ ++ +C H+
Sbjct: 321 TWNTIIASCVHS 332
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/398 (39%), Positives = 227/398 (57%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ +S EA+ +F +++ + D +++ S+L AC L AL +G +H Y+++K ++ +
Sbjct: 1270 YMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPN 1329
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L AL +DV++ T++I M G+G A+ F MQ
Sbjct: 1330 LLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQD 1389
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD+I FV VL ACSHAGL+DE +F LM+E+ I P IEH+ C+V +LGRAG++
Sbjct: 1390 LGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVD 1449
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A IK MPM + V G LL ACR++ N+ AA QL +L P+ G YV+LSN Y+
Sbjct: 1450 EAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYA 1509
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ +W+ V +R +M + IKK PG E+D VH F+
Sbjct: 1510 KAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVG 1569
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+VP L D++EE+KE L +H+EKLAI F +++ PG IRI KNLRVC D
Sbjct: 1570 KMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGD 1629
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A +ISK+ RE + D NRFHHF NG CSC D+W
Sbjct: 1630 CHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 1667
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 22/142 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV + +ALL+F+ + G+ D T +L A + L VGM +H +++ ++++
Sbjct: 1101 YVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLN 1160
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G M +DV++ +L+ A GQ + ALE EM++
Sbjct: 1161 VFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMEL 1220
Query: 99 RGVKPDAITFVGVLVACSHAGL 120
G+KPDA T +L A ++ L
Sbjct: 1221 LGLKPDAGTMASLLPAVTNTCL 1242
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 16/162 (9%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
++AL + +E++ GL D TM SLL A T+ L+ ++ MK +A
Sbjct: 1209 DDALEVCKEMELLGLKPDAGTMASLLPAVTNT-CLDNVSFVKEMFMK----------LAN 1257
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACS--HAGLVDERI 125
K +++ +I V +A++ F +M+ V PDAI+ VL AC A L+ RI
Sbjct: 1258 KSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRI 1317
Query: 126 SHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ + + ++P++ L+ + + G + A E+ M
Sbjct: 1318 HEYVV---RKRLQPNLLLENALIDMYAKCGCLEYAREVFDQM 1356
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/391 (39%), Positives = 227/391 (58%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG---- 64
+AL LFR +Q +G+ + +++S+L C L L+ G +H +++ ++DV +
Sbjct: 395 DALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLL 454
Query: 65 ------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
A+KDV+ ++I A G G +AL F++M G+ PD +
Sbjct: 455 SMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDV 514
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFVGVL ACS+ G V + + FN M KY + IEHY C+V +LGRAG++ +A +LI+
Sbjct: 515 TFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEK 574
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MPM D + G LLGACR H L+ AE AA++LL L P N G +++LSN Y+S +W V
Sbjct: 575 MPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDV 634
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------------KAGF 261
+R M +R + K PGC I V+ VH+F +AG+
Sbjct: 635 AELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGY 694
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P++S VL D+DEEEK +L H+EKLA+ +GL+ G+ IR++KNLRVC DCH A +
Sbjct: 695 YPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKL 754
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
I+KV RE ++ D NRFHHFK+GSCSC+D+W
Sbjct: 755 IAKVTGREIILRDANRFHHFKDGSCSCRDYW 785
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE- 123
M KD T +A+I V G ALE F MQ G++P+ + + VL C+ +D
Sbjct: 372 MREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHG 431
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
R H L+ ++ + + +YI + G +AKA+++
Sbjct: 432 REIHAQLVRSQFDLDVYVASVLLSMYI--KCGNLAKAKQVF 470
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/391 (39%), Positives = 227/391 (58%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG---- 64
+AL LFR +Q +G+ + +++S+L C L L+ G +H +++ ++DV +
Sbjct: 395 DALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLL 454
Query: 65 ------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
A+KDV+ ++I A G G +AL F++M G+ PD +
Sbjct: 455 SMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDV 514
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFVGVL ACS+ G V + + FN M KY + IEHY C+V +LGRAG++ +A +LI+
Sbjct: 515 TFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEK 574
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MPM D + G LLGACR H L+ AE AA++LL L P N G +++LSN Y+S +W V
Sbjct: 575 MPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDV 634
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------------KAGF 261
+R M +R + K PGC I V+ VH+F +AG+
Sbjct: 635 AELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGY 694
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P++S VL D+DEEEK +L H+EKLA+ +GL+ G+ IR++KNLRVC DCH A +
Sbjct: 695 YPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKL 754
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
I+KV RE ++ D NRFHHFK+GSCSC+D+W
Sbjct: 755 IAKVTGREIILRDANRFHHFKDGSCSCRDYW 785
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE- 123
M KD T +A+I V G ALE F MQ G++P+ + + VL C+ +D
Sbjct: 372 MREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHG 431
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
R H L+ ++ + + +YI + G +AKA+++
Sbjct: 432 REIHAQLVRSQFDLDVYVASVLLSMYI--KCGNLAKAKQVF 470
>gi|297743485|emb|CBI36352.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/376 (43%), Positives = 220/376 (58%), Gaps = 59/376 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y++ + +E L LFRE+Q + D+ TMVS+L AC HLGALE+G W+ YI K I++D
Sbjct: 265 YLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKID 324
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+G ALI + CG KA+ F M R D I++ V+ + G
Sbjct: 325 SFVG---------NALIDMYFNCGNVEKAIRIFNAMPHR----DKISWTAVIFGLAINGY 371
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLL 180
+E + F+ M K I P +E+IKNMP+ + V G LL
Sbjct: 372 GEEALDMFSQML-KASITP---------------------DEVIKNMPVKPNSIVWGSLL 409
Query: 181 GACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKK 240
GACR+H + E AE AAQQ+LEL P+NG YV+L N Y++ +W+K+ +R+LM +R IKK
Sbjct: 410 GACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKK 469
Query: 241 PPGCILIEVDGVVHEFVK------------------------AGFVPNKSEVLFDMDEEE 276
PGC LIE++G VHEFV AG+ P+ SEV D+ EEE
Sbjct: 470 TPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEEE 529
Query: 277 KETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRN 336
KE+A+ H+EKLAI FGL+S PGV IRI+KNLR+C DCH ++SKVYNRE +V DR
Sbjct: 530 KESAVYRHSEKLAIAFGLISSGPGVTIRIVKNLRMCVDCHYVAKLVSKVYNREVIVRDRT 589
Query: 337 RFHHFKNGSCSCKDFW 352
RFHHF++GSCSCKD+W
Sbjct: 590 RFHHFRHGSCSCKDYW 605
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 34/213 (15%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-- 67
A+ ++ E+ +G+ D+ T LL T A++ G LH +I+K +V + AL
Sbjct: 103 AVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIH 162
Query: 68 --------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
DV+T +I Q +++++ F EM+ V P +IT
Sbjct: 163 LYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSIT 222
Query: 108 FVGVLVACSHAG--LVDERI--SHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
V VL ACS V +R+ ++F+ M E+ + + G L + R + L
Sbjct: 223 LVSVLSACSKLKDLNVGKRVHRNYFDKMPERDFVSWTAMIDGYL-----QVNRFKEVLSL 277
Query: 164 IKNMPMA---LDHFVLGGLLGACRIHDNLEAAE 193
+ M A D F + +L AC LE E
Sbjct: 278 FREMQAANIKPDEFTMVSILTACAHLGALELGE 310
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/391 (39%), Positives = 237/391 (60%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKG-LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----NIEVDVGL 63
+ L L ++ ++G ++ +VS+L ACTHLGAL++G +H ++++ N+ V+ L
Sbjct: 172 DCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSL 231
Query: 64 ------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
MA K+ ++ + +I LAM G G + L F EM +G++PD
Sbjct: 232 IEMYLKCGXLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDD 291
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
I +VGVL ACSHAGLV E + FN M ++GI P+I+HYGC+V ++GRAG+I +A ELIK
Sbjct: 292 IVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIK 351
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MPM + + LL A ++H+NL+A E AA+QL +L YV+LSN Y+ +++W+
Sbjct: 352 SMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWED 411
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GF 261
V R R M + + + PG L+EV +H FV G+
Sbjct: 412 VARTRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGY 471
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P+ ++VL D+DEEEK+ L+ H++KLAI + L+ G +RI++NLR+CNDCHT T +
Sbjct: 472 XPDTTQVLCDVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPVRIVRNLRMCNDCHTYTKL 531
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS +++RE V DR+RFHHFK+G+CSC+D+W
Sbjct: 532 ISIIFDREITVRDRHRFHHFKDGACSCRDYW 562
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V+D EEAL+ ++E+ +G+ D T +LL AC L A+E GM +H +I+K +E D
Sbjct: 63 HVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLEND 122
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + +L + V + +ALI A G + L +M
Sbjct: 123 VFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSN 182
Query: 99 RGV-KPDAITFVGVLVACSHAGLVD 122
G + + V VL AC+H G +D
Sbjct: 183 EGYWRAEESILVSVLSACTHLGALD 207
>gi|125554650|gb|EAZ00256.1| hypothetical protein OsI_22267 [Oryza sativa Indica Group]
Length = 602
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 231/398 (58%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ +AL +F E++ G+ G+ S L+ACT GAL G ++ ++ + IEVD
Sbjct: 205 YVKADRFLDALEVFDEMRALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQSGIEVD 264
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L A+ D + T +I A+ G+ + ALE F++M+
Sbjct: 265 AKLATAVVDMYCKCGCVDEAWRVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEA 324
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV PD +T + VL AC+HAG V E + N + ++GI P EHYGC+V + GRAG++
Sbjct: 325 AGVAPDDVTLLNVLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLD 384
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A+++I MPM D VLG LLGAC+IH +++ E ++++L PDN G YV+L+N +
Sbjct: 385 EAKKVIDEMPMDPDLAVLGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLA 444
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
+ +W +V ++R LM ERN+ K G +IEVDG EF
Sbjct: 445 GAGRWDEVGKVRRLMDERNVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDMVS 504
Query: 257 -VKA-GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
++A G+VP+ E L D+ EE+KE AL H+EKLAI FGL+ P +RI KNLRVC D
Sbjct: 505 RIRAEGYVPDTGEALHDVAEEDKEAALLCHSEKLAIAFGLLRARPRETLRITKNLRVCRD 564
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT +S+V+ RE VV DR+RFHHFK+G CSCKD+W
Sbjct: 565 CHEATKYVSRVFGREIVVRDRSRFHHFKDGMCSCKDYW 602
>gi|115467246|ref|NP_001057222.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|51535413|dbj|BAD37283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595262|dbj|BAF19136.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|125596589|gb|EAZ36369.1| hypothetical protein OsJ_20697 [Oryza sativa Japonica Group]
Length = 602
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 231/398 (58%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ +AL +F E++ G+ G+ S L+ACT GAL G ++ ++ + IEVD
Sbjct: 205 YVKADRFLDALEVFDEMRALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQSGIEVD 264
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L A+ D + T +I A+ G+ + ALE F++M+
Sbjct: 265 AKLATAVVDMYCKCGCVDEAWGVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEA 324
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV PD +T + VL AC+HAG V E + N + ++GI P EHYGC+V + GRAG++
Sbjct: 325 AGVAPDDVTLLNVLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLD 384
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A+++I MPM D VLG LLGAC+IH +++ E ++++L PDN G YV+L+N +
Sbjct: 385 EAKKVIDEMPMDPDLAVLGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLA 444
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
+ +W +V ++R LM ERN+ K G +IEVDG EF
Sbjct: 445 GAGRWDEVGKVRRLMDERNVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDMVS 504
Query: 257 -VKA-GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
++A G+VP+ E L D+ EE+KE AL H+EKLAI FGL+ P +RI KNLRVC D
Sbjct: 505 RIRAEGYVPDTGEALHDVAEEDKEAALLCHSEKLAIAFGLLRARPRETLRITKNLRVCRD 564
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT +S+V+ RE VV DR+RFHHFK+G CSCKD+W
Sbjct: 565 CHEATKYVSRVFGREIVVRDRSRFHHFKDGMCSCKDYW 602
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/398 (41%), Positives = 220/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EE L LF+E+ G ++ +L C + ALE GM LH ++K V
Sbjct: 427 YSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVG 486
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL +DV++ +I A G G +ALE F M+
Sbjct: 487 CFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRK 546
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
KPD IT VGVL ACSH+GLV++ IS+F M +G+ EHY C++ +LGRAGR+
Sbjct: 547 TSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLD 606
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A L+K+MP D + G LLGA RIH N E AA+++ EL P+N G YV+LSN Y+
Sbjct: 607 EAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYA 666
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
SS KW+ V ++R +M ER +KK PG IEV VH F
Sbjct: 667 SSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDI 726
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
KAG+V VL D++EEEKE L H+EKLA+ +G++ PG IR+IKNLRVC D
Sbjct: 727 RMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILKIPPGRPIRVIKNLRVCRD 786
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA IS + R ++ D NRFHHF++GSCSC D+W
Sbjct: 787 CHTAFKCISAIEGRLIILRDSNRFHHFRDGSCSCGDYW 824
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/397 (39%), Positives = 227/397 (57%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V C L + ++ +G+T D TM+S+L C+ L A G +H I K +E DV
Sbjct: 493 VHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDV 552
Query: 62 GLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+G M KDV+T TALI M G+G KA+ F EM+
Sbjct: 553 PVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAA 612
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G+ PD + FV ++ ACSH+GLV+E +++F+ M + Y I P IEHY C+V +L R+ + K
Sbjct: 613 GIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDK 672
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
AE+ I +MP+ D + G LL ACR+ + E AER +++++EL PD+ G YV++SN Y++
Sbjct: 673 AEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAA 732
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF----------------------- 256
KW +V+ IR+ + R +KK PGC +E+ V+ F
Sbjct: 733 LGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGL 792
Query: 257 -VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
K G++ N VL D+DE+EK L H+E+LAI FGL++ PG ++++KNLRVC DC
Sbjct: 793 MAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDC 852
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
HT T ISK+ RE +V D NRFH FK+G+CSC D+W
Sbjct: 853 HTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 889
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 131/290 (45%), Gaps = 41/290 (14%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD------- 60
EE++ LF E+ ++ D +T+ S+L AC HLG LE G ++H Y++ E D
Sbjct: 299 EESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNIL 357
Query: 61 ---------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
V GM KD ++ ++I V G ++A++ F +M VKPD+
Sbjct: 358 INMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDS 416
Query: 106 ITFVGVLVACSHAG-LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+T+V +L + G L + H +L K G +I LV + + G + + ++
Sbjct: 417 VTYVMLLSMSTQLGDLHLGKELHCDL--AKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVF 474
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE--LLPDNGGSYVILS--NRYSSS 220
+NM A D ++ +C ++ R ++ + PD IL + ++
Sbjct: 475 ENMK-ARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAK 533
Query: 221 RKWKKVKR-IRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVL 269
R+ K++ I +L E ++ P G +LIE+ + K G + N +V
Sbjct: 534 RQGKEIHGCIFKLGLESDV--PVGNVLIEM------YSKCGSLRNSFQVF 575
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 23/156 (14%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG--- 64
EAL L+ E Q L D T S++ AC L E+ +H ++ D+ +G
Sbjct: 97 SEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNAL 156
Query: 65 -------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
M L+DV++ +LI G N+ALE +Y + GV PD+
Sbjct: 157 IDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDS 216
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSI 141
T VL AC G V+E L+ EK GI+ +
Sbjct: 217 YTMSSVLRACGGLGSVEEGDIIHGLI-EKIGIKKDV 251
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/399 (41%), Positives = 230/399 (57%), Gaps = 48/399 (12%)
Query: 1 YVEDSACEEALLLFREVQH-KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ EA+ +++ ++ K + ++ T VS+L A H+GAL+ GM +H ++K N+ +
Sbjct: 261 YAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHL 320
Query: 60 DVGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQ 97
DV + L DV +T A+I + G K L+ F EM
Sbjct: 321 DVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEML 380
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GVKPD +TFV +L ACSH+G V+E F LM E YGI+PS++HYGC+V +LGRAG +
Sbjct: 381 DEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYL 439
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
A + IK+MP+ D + G LLGACRIH N+E + A+ +L E+ N G YV+LSN Y
Sbjct: 440 EMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIY 499
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
++ KW+ V ++R L ER +KK PG IEV+ V F
Sbjct: 500 ANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLT 559
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G++P+ S VL D++E+EKE L H+E+LAI FG++S P IRI KNLRVC
Sbjct: 560 AKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCG 619
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH AT IS++ RE VV D NRFHHFK+G CSC D+W
Sbjct: 620 DCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 658
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 120/252 (47%), Gaps = 20/252 (7%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
+++ +AL + E++ +G+ + VT+VS+L + A ++G+ + K E+
Sbjct: 192 IQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYA-KLGLLDSAH---KVFEI-- 245
Query: 62 GLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM-QIRGVKPDAITFVGVLVACSHAGL 120
+ +KDV++ LI A G ++A+E + M + + + P+ T+V +L A +H G
Sbjct: 246 ---IPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGA 302
Query: 121 VDERIS-HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGL 179
+ + + H ++ K + + CL+ + G+ GR+ A L +P +
Sbjct: 303 LQQGMKIHGRVI--KTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE-SSVTWNAI 359
Query: 180 LGACRIHDNLEAAERAAQQLLE--LLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERN 237
+ IH + E + ++L+ + PD+ ++V L + S S ++ K LM E
Sbjct: 360 ISCHGIHGHAEKTLKLFGEMLDEGVKPDH-VTFVSLLSACSHSGFVEEGKWCFRLMQEYG 418
Query: 238 IK---KPPGCIL 246
IK K GC++
Sbjct: 419 IKPSLKHYGCMV 430
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 163/401 (40%), Positives = 228/401 (56%), Gaps = 50/401 (12%)
Query: 1 YVEDSACEEALLLFREVQ-HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ AL LF E+Q K D+VT++ L A LGA++ G W+H YI K +I +
Sbjct: 381 YEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINL 440
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ L +L KDV +A+I LAM GQG AL+ F M
Sbjct: 441 NCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSML 500
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+KP+A+TF +L AC+HAGLV+E F M YGI P I+HY C+V I GRAG +
Sbjct: 501 EAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLL 560
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA I+ MP+ V G LLGAC H N+E AE A Q LLEL P N G++V+LSN Y
Sbjct: 561 EKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIY 620
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ + W+KV +R+LM + ++KK P C I+V+G+VHEF+
Sbjct: 621 AKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEIS 680
Query: 258 ----KAGFVPNKSEVLFDMDEEEK--ETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
G+ P+ S +L + EE+ E +LN+H+EKLAI FGL+S IRI+KN+R+
Sbjct: 681 EKFKPIGYKPDMSNLL-QLSEEDNLMEQSLNVHSEKLAIAFGLISTASSQPIRIVKNIRI 739
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH ++S++Y+R+ ++ DR RFHHF+ G CSC D+W
Sbjct: 740 CGDCHAFAKLVSQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 102/249 (40%), Gaps = 58/249 (23%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK------------ 55
++ALLLF+E++ K + + +TMVS+L AC LE G W+ YI
Sbjct: 256 DKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAM 315
Query: 56 ----------NIEVDVGLGMALKDVMTLT------------------------------- 74
N D+ M+ KD+++ T
Sbjct: 316 LDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWN 375
Query: 75 ALIVVLAMCGQGNKALEYFYEMQI-RGVKPDAITFVGVLVACSHAGLVDERISHF-NLMS 132
ALI G+ AL F+EMQ+ + KPD +T + L A + G +D H+ ++
Sbjct: 376 ALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAID--FGHWIHVYI 433
Query: 133 EKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAA 192
+K+ I + L+ + + G + KA E+ + D +V ++GA ++ +AA
Sbjct: 434 KKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERK-DVYVWSAMIGALAMYGQGKAA 492
Query: 193 ERAAQQLLE 201
+LE
Sbjct: 493 LDLFSSMLE 501
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 23/139 (16%)
Query: 1 YVEDSACEEALLLFREVQHK-GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y S ++ L+F + H +K T L A + L L +G LH ++K ++
Sbjct: 147 YASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSS 206
Query: 60 D----------------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
D V M KDV++ A+I A+ G +KAL F EM+
Sbjct: 207 DLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEME 266
Query: 98 IRGVKPDAITFVGVLVACS 116
++ VKP+ IT V VL AC+
Sbjct: 267 MKDVKPNVITMVSVLSACA 285
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 158/390 (40%), Positives = 222/390 (56%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LFRE+Q G+ + VT+ LL AC ++ AL G H + +++ I DV +G AL
Sbjct: 369 EALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALI 428
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
K+++ A+I AM G+ +A+E F MQ G KPD I
Sbjct: 429 DMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDII 488
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
+F VL ACS +GL +E +FN MS KYGI +EHY C+V +L RAG++ +A +I+
Sbjct: 489 SFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRR 548
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP+ D V G LL +CR+H+N+ E AA++L EL P N G+Y++LSN Y+S W +V
Sbjct: 549 MPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEV 608
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVH------------------------EFVKAGFV 262
R+R++M + ++K PGC IEV VH E K G+
Sbjct: 609 NRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYF 668
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P + VL D++E++KE L H+EKLA+ FGL++ PG +++IKNLR+C DCH I
Sbjct: 669 PEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFI 728
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S RE V D NRFHHFK G+CSC D+W
Sbjct: 729 SSFERREIFVRDTNRFHHFKEGACSCGDYW 758
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 60/219 (27%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EA+L+F ++ +G D T+ S+L A L L +G+ +H Y++K+ + D + AL
Sbjct: 232 SEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSAL 291
Query: 68 ----------------------KDVMTLTALIV--------------------------- 78
DV + A I
Sbjct: 292 IDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNV 351
Query: 79 -----VLAMCGQGNK---ALEYFYEMQIRGVKPDAITFVGVLVACSH-AGLVDERISHFN 129
++A C Q + ALE F EMQI GVKP+++T +L AC + A L+ + +H
Sbjct: 352 VSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAH-- 409
Query: 130 LMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
S + GI + L+ + + GRI + +P
Sbjct: 410 CFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIP 448
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 22/141 (15%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-- 67
AL F ++ +GL D + S + AC L AL+ +H + D + +L
Sbjct: 98 ALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVH 157
Query: 68 --------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
DV++ +AL+ A G ++A F EM GV+P+ I+
Sbjct: 158 MYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLIS 217
Query: 108 FVGVLVACSHAGLVDERISHF 128
+ G++ +H+GL E + F
Sbjct: 218 WNGMIAGFNHSGLYSEAVLMF 238
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 226/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ +S EA+ +F +++ + D +++ S+L AC L AL +G +H Y+++K ++ +
Sbjct: 281 YMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPN 340
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L M +DV++ T++I M G+G A+ F MQ
Sbjct: 341 LLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQD 400
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD+I FV VL ACSHAGL+DE +F LM+E+ I P IEH+ C+V +LGRAG++
Sbjct: 401 LGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVD 460
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A IK MPM + V G LL ACR++ N+ AA QL +L P+ G YV+LSN Y+
Sbjct: 461 EAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYA 520
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ +W+ V +R +M + IKK PG E+D VH F+
Sbjct: 521 KAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVG 580
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+VP L D++EE+KE L +H+EKLAI F +++ PG IRI KNLRVC D
Sbjct: 581 KMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGD 640
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A +ISK+ RE + D NRFHHF NG CSC D+W
Sbjct: 641 CHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 678
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 22/142 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV + +ALL+F+ + G+ D T +L A + L VGM +H +++ ++++
Sbjct: 112 YVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLN 171
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G M +DV++ +L+ A GQ + ALE EM++
Sbjct: 172 VFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMEL 231
Query: 99 RGVKPDAITFVGVLVACSHAGL 120
G+KPDA T +L A ++ L
Sbjct: 232 LGLKPDAGTMASLLPAVTNTCL 253
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 16/162 (9%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
++AL + +E++ GL D TM SLL A T+ L+ ++ MK +A
Sbjct: 220 DDALEVCKEMELLGLKPDAGTMASLLPAVTNT-CLDNVSFVKEMFMK----------LAN 268
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACS--HAGLVDERI 125
K +++ +I V +A++ F +M+ V PDAI+ VL AC A L+ RI
Sbjct: 269 KSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRI 328
Query: 126 SHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ + + ++P++ L+ + + G + A E+ M
Sbjct: 329 HEYVV---RKRLQPNLLLENALIDMYAKCGCLEYAREVFDQM 367
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/398 (39%), Positives = 220/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ E+A+ LFRE+Q+ + + VT+ +L AC LGAL +G W+H + + E
Sbjct: 395 YTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL K+ +T +I + G G +AL F EM
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLN 514
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ P +TF+ VL ACSHAGLV E FN M +YG PS++HY C+V ILGRAG +
Sbjct: 515 SGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQ 574
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I+ MP+ V LLGACRIH + A +++L EL PDN G +V+LSN +S
Sbjct: 575 RALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHS 634
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ R + + +R+ +R + K PG LIE+ H F
Sbjct: 635 ADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKLEG 694
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+ P L D++EEE+E + +H+E+LAI FGL++ PG IRIIKNLRVC D
Sbjct: 695 KMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLD 754
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTAT +ISK+ R VV D NRFHHFK+G CSC D+W
Sbjct: 755 CHTATKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 72/191 (37%), Gaps = 28/191 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + E +L LF+E+ G T+VSL+ HL + +H Y +K N
Sbjct: 297 YTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIYA---IHGYSLKSNFLSH 353
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL K + + A+I G A+ F EMQ
Sbjct: 354 TSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQN 413
Query: 99 RGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
P+ +T +L AC+ G + + H + S + SI L+ + + G I
Sbjct: 414 SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDF--ESSIYVSTALIGMYAKCGSI 471
Query: 158 AKAEELIKNMP 168
A+A L MP
Sbjct: 472 AEARRLFDFMP 482
>gi|224088870|ref|XP_002308572.1| predicted protein [Populus trichocarpa]
gi|222854548|gb|EEE92095.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/398 (41%), Positives = 225/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV + EAL F+ ++ GL D+ T+V++L A L LE G +H I ++ +
Sbjct: 36 YVHNGKLGEALECFKRMRESGLVPDEATLVTMLSASAQLCLLEHGQSIHSIIDSLSLPMT 95
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL +DV T +I LA G G AL F
Sbjct: 96 ISIGTALLDMYAKCGCIEQSRLLFENMPRRDVSTWNVMICGLASHGLGKDALTLFERFLN 155
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ P +TFVGVL ACS AGLV E +F +M++ YGI P +EHYGC+V +LGRAG +
Sbjct: 156 EGLHPMNVTFVGVLNACSRAGLVKEGRHYFQMMTDSYGIEPEMEHYGCMVDLLGRAGLVF 215
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A ++I++M ++ D + +L ACRIH E E+ +L+EL P G YV L++ Y+
Sbjct: 216 EAIKVIESMAISPDPVLWAMVLCACRIHGLAELGEKIGNRLIELDPTYDGHYVQLASIYA 275
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+SRKW+ V R+R LMAERN K G LIE G VH FV
Sbjct: 276 NSRKWEDVVRVRRLMAERNTSKVAGWSLIEARGKVHRFVAGHREHEQSLEIQKMLEIIET 335
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VPN S VL D+ EEEKE A+ +H+E+LAI FGL+ PG IRI+KNLRVC D
Sbjct: 336 RLAAAGYVPNVSPVLHDIGEEEKENAIKVHSERLAIAFGLLVTGPGSCIRIVKNLRVCWD 395
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH T +IS+V+ RE +V D +RFHHFK G CSC D+W
Sbjct: 396 CHEVTKMISRVFEREIIVRDGSRFHHFKEGKCSCLDYW 433
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 163/391 (41%), Positives = 222/391 (56%), Gaps = 47/391 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL LF +++ G+ + T+VSLL AC HLGAL+ G+ LH YI IEV+
Sbjct: 169 YAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVN 228
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL KDV+ +I +A+ G +A + F EM+
Sbjct: 229 SIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKE 288
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V+P+ ITFV +L ACSHAG+VDE + MS YGI P +EHY C++ +L RAG +
Sbjct: 289 ASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLE 348
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A ELI MPM + LG LLG CRIH N E E ++L+ L P + G Y++LSN Y+
Sbjct: 349 EAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYA 408
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+++KW +++R LM I K PG +IE+ G+VH FV
Sbjct: 409 AAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYDKLNEIHT 468
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+ + VL DM+EE+KE AL +H+EKLAI +GL+ IRI+KNLRVC
Sbjct: 469 RLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCR 528
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNG 344
DCH T +ISKVY RE +V DRNRFHHF++G
Sbjct: 529 DCHHVTKLISKVYGREIIVRDRNRFHHFEDG 559
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 112/237 (47%), Gaps = 8/237 (3%)
Query: 48 LHPYIMKKNIEVDVGL--GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
L ++ N+E GL M +DV++ +++ A CG+ N+AL F +M+ GVKP
Sbjct: 135 LSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTE 194
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
T V +L AC+H G +D+ + H + I + LV + + G+I+ A ++
Sbjct: 195 ATVVSLLSACAHLGALDKGL-HLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFN 253
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLEL-LPDNGGSYVILSNRYSSSRKWK 224
M + D ++ IH +++ A++ +++ E + N ++V + + S +
Sbjct: 254 AME-SKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVD 312
Query: 225 KVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFDMDEEEKETAL 281
+ +++ + M+ +P + D V+ +AG + E++ M E +AL
Sbjct: 313 EGQKLLDCMSSSYGIEPK---VEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPSAL 366
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/397 (39%), Positives = 224/397 (56%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
VE+ E AL + +++ + D+ T +L+ AC+ L ALE G +H I+K N D
Sbjct: 1215 VENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDP 1274
Query: 62 GLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ +L D + + A+IV LA G +AL++F M+ R
Sbjct: 1275 FVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSR 1334
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
GV PD +TF+GVL ACSH+GLV E +F M + YGI P IEHY CLV L RAGRI +
Sbjct: 1335 GVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEE 1394
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
AE++I +MP + LL ACR+ + E +R A++LL L P + +YV+LSN Y++
Sbjct: 1395 AEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAA 1454
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
+ +W+ V R +M + N+KK PG +++ VH FV
Sbjct: 1455 ANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKR 1514
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+ G+VP+ L D++EE+KE +L H+EKLAI +GL+ P +R+IKNLRVC DC
Sbjct: 1515 IREEGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDC 1574
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H+A ISKV+ RE V+ D NRFHHF+NG CSC D+W
Sbjct: 1575 HSAIKYISKVFKREIVLRDANRFHHFRNGICSCGDYW 1611
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 80/188 (42%), Gaps = 25/188 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ +AL L+ +Q G D++T+V+ A L L+ G +H ++K+ +D
Sbjct: 1113 YIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLD 1172
Query: 61 VG-----LGMALK-----------------DVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L M LK D + T +I GQ AL +++M++
Sbjct: 1173 LFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRL 1232
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V+PD TF ++ ACS +++ R H N++ P + LV + + G I
Sbjct: 1233 SKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFV--MTSLVDMYAKCGNI 1290
Query: 158 AKAEELIK 165
A L K
Sbjct: 1291 EDARGLFK 1298
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 158/398 (39%), Positives = 227/398 (57%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +A+ FR + G + T+V +L AC+HLGA G W+H +I + ++
Sbjct: 165 YTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLN 224
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL K+V T LI AM GQG+ AL+ F M +
Sbjct: 225 VFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLM 284
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
KPD +TF+GVL AC H GLV E F M +++G++P IEHYGC+V +LGRAG +
Sbjct: 285 ENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLE 344
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A ELI++M + D + LL ACR+H N + E ++L+EL P+NG +YV+LSN YS
Sbjct: 345 EALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYS 404
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
R+W +V ++R +M R I+K PGC IE++ VV+EFV +
Sbjct: 405 RERRWAEVGKLRGMMNLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIK 464
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+V L+D+++EEKE ++ H+EKLA+ FGL++ +RI+KNLR+C D
Sbjct: 465 KLKENGYVTGTDMALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLD 524
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH ++S VY R VV DRNRFHHF G CSC+D+W
Sbjct: 525 CHEFFKVLSLVYKRYIVVRDRNRFHHFYEGFCSCRDYW 562
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 160/410 (39%), Positives = 229/410 (55%), Gaps = 58/410 (14%)
Query: 1 YVEDSACEEALLLFREVQ-----------HKGLTGDKVTMVSLLLACTHLGALEVGMWLH 49
YV E+ALL+ ++Q L + +T++++L +C L AL G +H
Sbjct: 477 YVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIH 536
Query: 50 PYIMKKNIEVDVGLGMALKD----------------------VMTLTALIVVLAMCGQGN 87
Y +K N+ DV +G AL D V+T +++ M G
Sbjct: 537 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQ 596
Query: 88 KALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCL 147
A++ M ++GVKP+ +TF+ V ACSH+G+V+E + F M + YG+ PS +HY C+
Sbjct: 597 DAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACV 656
Query: 148 VYILGRAGRIAKAEELIKNMPMALDHF-VLGGLLGACRIHDNLEAAERAAQQLLELLPDN 206
V +LGRAGR+ +A +LI +P D LLGACRIH+NLE E AAQ L++L P+
Sbjct: 657 VDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNV 716
Query: 207 GGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------- 257
YV+L+N YSS+ W K +R M + ++K PGC IE VH+FV
Sbjct: 717 ASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQS 776
Query: 258 ---------------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVL 302
K G++P+ S VL +++E+EKE L H+EKLAI FG+++ PG +
Sbjct: 777 EKLRGYLETLWERMRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTI 836
Query: 303 IRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IR+ KNLRVCNDCH AT ISKV +RE ++ D RFHHFKNG+CSC D+W
Sbjct: 837 IRVAKNLRVCNDCHLATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 24/134 (17%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALE---VGMWLHPYIMKKN-------- 56
E AL FR + + + T+VS+ LAC++ E +G +H Y ++K
Sbjct: 177 EMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFIIN 236
Query: 57 ------------IEVDVGLG-MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
V LG +D++T ++ L Q +ALEY EM + GV+P
Sbjct: 237 TLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEP 296
Query: 104 DAITFVGVLVACSH 117
D T VL ACSH
Sbjct: 297 DGFTISSVLPACSH 310
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 34/150 (22%)
Query: 1 YVEDSACEEALLLFREVQHK-GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ EEALLLF E++ GL + TM ++ AC GA +H +++K+ ++
Sbjct: 375 YAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDR 434
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
D + AL +D++T +I + AL ++MQ
Sbjct: 435 DRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQ 494
Query: 98 IR-----------GVKPDAITFVGVLVACS 116
I +KP++IT + +L +C+
Sbjct: 495 ILERKASERASRVSLKPNSITLMTILPSCA 524
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 24/140 (17%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK-NIEVDVGLGMAL 67
EAL RE+ +G+ D T+ S+L AC+HL L G LH Y +K +++ + +G AL
Sbjct: 281 EALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSAL 340
Query: 68 KDVMT----------------------LTALIVVLAMCGQGNKALEYFYEM-QIRGVKPD 104
D+ A+I A +AL F EM + G+ +
Sbjct: 341 VDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLAN 400
Query: 105 AITFVGVLVACSHAGLVDER 124
+ T GV+ AC +G ++
Sbjct: 401 STTMAGVVPACVRSGAFSKK 420
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 155/397 (39%), Positives = 227/397 (57%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V C L + ++ +G+T D TM+S+L C+ L A G +H I K +E DV
Sbjct: 552 VHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDV 611
Query: 62 GLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+G M KDV+T TALI M G+G KA+ F EM+
Sbjct: 612 PVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAA 671
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G+ PD + FV ++ ACSH+GLV+E +++F+ M + Y I P IEHY C+V +L R+ + K
Sbjct: 672 GIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDK 731
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
AE+ I +MP+ D + G LL ACR+ + E A+R +++++EL PD+ G YV++SN Y++
Sbjct: 732 AEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAA 791
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF----------------------- 256
KW +V+ IR+ + R +KK PGC +E+ V+ F
Sbjct: 792 LGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGL 851
Query: 257 -VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
K G++ N VL D+DE+EK L H+E+LAI FGL++ PG ++++KNLRVC DC
Sbjct: 852 MAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDC 911
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
HT T ISK+ RE +V D NRFH FK+G+CSC D+W
Sbjct: 912 HTVTKYISKIXQRELLVRDANRFHVFKDGACSCGDYW 948
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 131/290 (45%), Gaps = 41/290 (14%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD------- 60
EE++ LF E+ ++ D +T+ S+L AC HLG LE G ++H Y++ E D
Sbjct: 358 EESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNIL 416
Query: 61 ---------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
V GM KD ++ ++I V G ++A++ F +M VKPD+
Sbjct: 417 INMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDS 475
Query: 106 ITFVGVLVACSHAG-LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+T+V +L + G L + H +L K G +I LV + + G + + ++
Sbjct: 476 VTYVMLLSMSTQLGDLXLGKELHCDL--AKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVF 533
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE--LLPDNGGSYVILS--NRYSSS 220
+NM A D ++ +C ++ R ++ + PD IL + ++
Sbjct: 534 ENMK-ARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAK 592
Query: 221 RKWKKVKR-IRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVL 269
R+ K++ I +L E ++ P G +LIE+ + K G + N +V
Sbjct: 593 RQGKEIHGCIFKLGLESDV--PVGNVLIEM------YSKCGSLRNSFQVF 634
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 23/156 (14%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG--- 64
EAL L+ E Q L D T S++ AC L E+ +H ++ D+ +G
Sbjct: 156 SEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNAL 215
Query: 65 -------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
M L+DV++ +LI G N+ALE +Y + GV PD+
Sbjct: 216 IDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDS 275
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSI 141
T VL AC G V+E L+ EK GI+ +
Sbjct: 276 YTMSSVLRACGGLGSVEEGDIIHGLI-EKIGIKKDV 310
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 155/391 (39%), Positives = 237/391 (60%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGL-TGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----NIEVDVGL 63
+ L L ++ ++G ++ +VS+L ACTHLGAL++G +H ++++ N+ V+ L
Sbjct: 215 DCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSL 274
Query: 64 ------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
MA K+ ++ + +I LAM G G + L F EM +G++PD
Sbjct: 275 IEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDD 334
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
I +VGVL ACSHAGLV E + FN M ++GI P+I+HYGC+V ++GRAG+I +A ELIK
Sbjct: 335 IVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIK 394
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MPM + + LL A ++H+NL+A E AA+QL +L YV+LSN Y+ +++W+
Sbjct: 395 SMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWED 454
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GF 261
V + R M + + + PG L+EV +H FV G+
Sbjct: 455 VAKTRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGY 514
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P+ ++VL D+DEEEK+ L+ H++KLAI + L+ G IRI++NLR+CNDCHT T +
Sbjct: 515 SPDTTQVLCDVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPIRIVRNLRMCNDCHTYTKL 574
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS +++RE V DR+RFHHFK+G+CSC+D+W
Sbjct: 575 ISIIFDREITVRDRHRFHHFKDGACSCRDYW 605
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V+D EEAL+ ++E+ +G+ D T +LL AC L A+E GM +H +I+K +E D
Sbjct: 106 HVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLEND 165
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + +L + V + +ALI A G + L +M
Sbjct: 166 VFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSN 225
Query: 99 RGV-KPDAITFVGVLVACSHAGLVD 122
G + + V VL AC+H G +D
Sbjct: 226 EGYWRAEESILVSVLSACTHLGALD 250
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 159/398 (39%), Positives = 226/398 (56%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL LF E+Q + D T+VS++ A L W+H ++ ++ +
Sbjct: 420 YAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKN 479
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL D V+T A+I G G +AL+ F EMQ
Sbjct: 480 VFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQN 539
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
VKP+ ITF+ V+ ACSH+GLV+E + +F M E YG+ P+++HYG +V +LGRAGR+
Sbjct: 540 GSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLD 599
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A + I++MP+ VLG +LGACRIH N+E E+ A +L +L PD+GG +V+L+N Y+
Sbjct: 600 DAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYA 659
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
S+ W KV R+R M ++ I+K PGC L+E+ VH F
Sbjct: 660 SASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGD 719
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VP+ + + D++E+ KE L+ H+E+LAI FGL++ G I I KNLRVC D
Sbjct: 720 EMKAAGYVPDTNSI-HDVEEDVKEQLLSSHSERLAIAFGLLNTRHGTAIHIRKNLRVCGD 778
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT IS V RE +V D RFHHFKNG CSC D+W
Sbjct: 779 CHEATKYISLVTGREIIVRDLRRFHHFKNGICSCGDYW 816
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 22/136 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EEA F ++ +G+ V+M+ L AC +LG LE G ++H + +K I D
Sbjct: 319 YAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFD 378
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + +L K V+T A+I+ A G N+AL F EMQ
Sbjct: 379 VSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQS 438
Query: 99 RGVKPDAITFVGVLVA 114
+KPD+ T V V+ A
Sbjct: 439 HDIKPDSFTLVSVITA 454
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 25/190 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ A+ + ++Q G D +T+VS+L A L AL +G +H Y + E
Sbjct: 218 YAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYM 277
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + GM+ ++V++ +I A G+ +A F +M
Sbjct: 278 VNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLD 337
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV+P ++ +G L AC++ G ++ R H L +K G S+ L+ + + R+
Sbjct: 338 EGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSV--MNSLISMYSKCKRV 395
Query: 158 AKAEELIKNM 167
A + N+
Sbjct: 396 DIAASVFGNL 405
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 156/397 (39%), Positives = 222/397 (55%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------- 54
VE+ E+AL + +++ G+ D+ T +L+ AC+ L ALE G +H IMK
Sbjct: 577 VENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDP 636
Query: 55 -------------KNIEVDVGL--GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
NIE GL M + V A+IV LA G +AL +F EM+ R
Sbjct: 637 FVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSR 696
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
GV PD +TF+GVL ACSH+GL + +F+ M + YG+ P IEHY CLV L RAG I +
Sbjct: 697 GVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQE 756
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
AE+++ +MP + LL ACR+ + E ER A++L + P + +YV+LSN Y++
Sbjct: 757 AEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAA 816
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
+ +W+ R +M N+KK PG I++ VH FV
Sbjct: 817 ANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKR 876
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+ G+VP+ L D++EE+KE+AL+ H+EKLAI +GL+ P +R+IKNLRVC DC
Sbjct: 877 IKEEGYVPDTEFALVDIEEEDKESALSYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDC 936
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H A IS V+ RE V+ D NRFHHF++G CSC D+W
Sbjct: 937 HNAIKYISNVFQREIVLRDANRFHHFRSGICSCGDYW 973
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 25/182 (13%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVG-----L 63
EAL LF + +G D++T + A L L+ G +H ++K D+ L
Sbjct: 483 EALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGIL 542
Query: 64 GMALK-----------------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
M LK D + T +I G+ +AL +++M++ GV+PD
Sbjct: 543 DMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEY 602
Query: 107 TFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
TF ++ ACS +++ + H N+M P + LV + + G I A L +
Sbjct: 603 TFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFR 660
Query: 166 NM 167
M
Sbjct: 661 RM 662
>gi|53793521|dbj|BAD54682.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 381
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 153/379 (40%), Positives = 212/379 (55%), Gaps = 49/379 (12%)
Query: 23 TGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK-NIEVDVGLGMAL-------------- 67
T D VT+++LL AC HLGAL W H Y+ + + L AL
Sbjct: 3 TADHVTLLALLSACAHLGALHTARWAHAYLATTCSFPITTNLATALLNMYMRCGDVQTAC 62
Query: 68 ----------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSH 117
KDV T T +I LA+ G AL F M+ ++PD++T VL AC+H
Sbjct: 63 SLFHSTPTRHKDVHTWTVMIAGLALNGFSTDALHLFTHMKDHNIQPDSVTLTAVLSACTH 122
Query: 118 AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLG 177
AG+VDE M Y ++P+IEHYGC V +LGRAG + +A LI+ +P D + G
Sbjct: 123 AGMVDEGKRILRRMPLDYHLQPTIEHYGCTVDLLGRAGLLEEALALIRAVPFKADVALWG 182
Query: 178 GLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERN 237
LL ACR H N E + A ++L L P + G++V LSN Y+++ KW V+ +R M +
Sbjct: 183 ALLVACRCHRNFEMGQMVAMEILRLDPQHAGAWVFLSNVYAAAGKWDLVQEVRSSMKQHR 242
Query: 238 IKKPPGCILIEVDGVVHEFVKA------------------------GFVPNKSEVLFDMD 273
I KPPG ++E+DGVV+EF+ G P V FD+D
Sbjct: 243 IHKPPGSSVVELDGVVYEFLSGDHSHPQSDQIYAMLDEIGKTLSLKGHKPATKLVTFDID 302
Query: 274 EEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVM 333
EE+KE ++ H+EKLA+ FGL++ G +IRI+KNLR+C DCH+ ++S+VY+R VV
Sbjct: 303 EEDKEVCISQHSEKLAVAFGLINTRRGAVIRIVKNLRICEDCHSVMKVVSEVYDRVIVVR 362
Query: 334 DRNRFHHFKNGSCSCKDFW 352
DRNRFHHFK+GSCSC D+W
Sbjct: 363 DRNRFHHFKSGSCSCLDYW 381
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 159/383 (41%), Positives = 222/383 (57%), Gaps = 46/383 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +E L LF+E+Q G D+ T+VS++ AC L ALE G W+H YI + + ++
Sbjct: 348 YAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTIN 407
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG L D + T ALI+ LAM G +L+ F M+
Sbjct: 408 VILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKK 467
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V P+ ITF+GVL AC H GLVDE HF M + I+P+++HYGC+V +LGRAG++
Sbjct: 468 CHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQ 527
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AEEL+ MPM D G LLGAC+ H + E R ++L+EL PD+ G +V+LSN Y+
Sbjct: 528 EAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYA 587
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
S KW V IR +M + + K PGC +IE +GV+HEF+
Sbjct: 588 SKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAM 647
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P+ +EVL D+DEEEKE+ L H+EKLAI FGL++ P IRI+KNLR+CND
Sbjct: 648 KLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICND 707
Query: 315 CHTATNIISKVYNRETVVMDRNR 337
CHTA +ISK + R+ V + R +
Sbjct: 708 CHTAAKLISKAFCRKIVFLFRGQ 730
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 157/391 (40%), Positives = 226/391 (57%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG---- 64
EAL LFR +Q +GL + +++S+L C L +L+ G +H +++ + D+ +
Sbjct: 321 EALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLI 380
Query: 65 ------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
LKDV+ ++I + G G +AL F++M GV PD +
Sbjct: 381 TMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDV 440
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF+GVL ACS++G V E + F M KY + P IEHY CLV +LGRA ++ +A +L++
Sbjct: 441 TFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEK 500
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MPM D V G LLGACR H L+ AE A ++L +L P N G YV+LSN Y+ +W+ V
Sbjct: 501 MPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDV 560
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------------KAGF 261
+ +RE + R++ K PGC IEV+ VH F +AG+
Sbjct: 561 EVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQPIIMKMLEKLGGLLREAGY 620
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P+ S VL D+DEEEK +L H+EKLA+ +GL+ G+ IR++KNLRVC DCH+A +
Sbjct: 621 CPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKL 680
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
I+KV RE ++ D NRFHHFK+G CSCKD+W
Sbjct: 681 IAKVTGREIILRDANRFHHFKDGHCSCKDYW 711
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEAL +F ++ G+ D VT + +L AC++ G ++ G+ L MK +V+
Sbjct: 414 YSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFE-TMKCKYQVE 472
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC 115
G + L+ +L Q N+A++ +M + +PDAI + +L AC
Sbjct: 473 PG-------IEHYACLVDLLGRADQVNEAMKLVEKMPM---EPDAIVWGALLGAC 517
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 163/397 (41%), Positives = 224/397 (56%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
+E+ E AL +F +++ G+ D+ T+ +L A + L ALE G +H +K N D
Sbjct: 601 IENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDP 660
Query: 62 GLGMALKDV-------------------MTLTA---LIVVLAMCGQGNKALEYFYEMQIR 99
+G +L D+ M +TA ++V LA G+G +AL+ F +M+
Sbjct: 661 FVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESL 720
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G+KPD +TF+GVL ACSH+GLV E + M YGI+P IEHY CL LGRAG + +
Sbjct: 721 GIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKE 780
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
AE LI +M M + LL ACR+ + E +R A +LLEL P + +YV+LSN Y++
Sbjct: 781 AENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAA 840
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
+ KW ++K R +M +KK PG IEV +H FV
Sbjct: 841 ASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRD 900
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+ G+VP L D++EEEKE AL H+EKLA+ FGL+S P IR+IKNLRVC DC
Sbjct: 901 IKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDC 960
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H A ISKVY+RE V+ D NRFH FK+G CSC D+W
Sbjct: 961 HNAMKYISKVYDREIVLRDANRFHRFKDGICSCGDYW 997
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 165/399 (41%), Positives = 229/399 (57%), Gaps = 48/399 (12%)
Query: 1 YVEDSACEEALLLFREVQH-KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ EA+ +++ ++ K + ++ T VS+L A H+GAL+ GM +H ++K N+ +
Sbjct: 494 YAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHL 553
Query: 60 DVGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQ 97
DV + L DV +T A+I + G K L+ F EM
Sbjct: 554 DVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEML 613
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GVKPD +TFV +L ACSH+G V+E F LM E YGI+PS++HYGC+V +LGRAG +
Sbjct: 614 DEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYL 672
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
A IK+MP+ D + G LLGACRIH N+E + A+ +L E+ N G YV+LSN Y
Sbjct: 673 EMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIY 732
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
++ KW+ V ++R L ER +KK PG IEV+ V F
Sbjct: 733 ANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLT 792
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G++P+ S VL D++E+EKE L H+E+LAI FG++S P IRI KNLRVC
Sbjct: 793 AKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCG 852
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH AT IS++ RE VV D NRFHHFK+G CSC D+W
Sbjct: 853 DCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 22/132 (16%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
+++ +AL + E++ +G+ + VT+VS+L C LG + M +H Y++K +E D+
Sbjct: 292 IQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDL 351
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ AL DV++ ++I A +F +MQ+
Sbjct: 352 FVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLN 411
Query: 100 GVKPDAITFVGV 111
G +PD +T V +
Sbjct: 412 GFQPDLLTLVSL 423
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 114/264 (43%), Gaps = 34/264 (12%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN-IEVDVGLGMAL---- 67
F ++Q G D +T+VSL + +H +IM++ + DV +G A+
Sbjct: 404 FFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMY 463
Query: 68 ------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM-QIRGVKPDAITF 108
KDV++ LI A G ++A+E + M + + + P+ T+
Sbjct: 464 AKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTW 523
Query: 109 VGVLVACSHAGLVDERIS-HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
V +L A +H G + + + H ++ K + + CL+ + G+ GR+ A L +
Sbjct: 524 VSILPAYAHVGALQQGMRIHGRVI--KTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQV 581
Query: 168 PMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE--LLPDNGGSYVILSNRYSSSRKWKK 225
P ++ IH + E + ++L+ + PD+ ++V L + S S ++
Sbjct: 582 PQE-SSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDH-VTFVSLLSACSHSGFVEE 639
Query: 226 VKRIRELMAERNIK---KPPGCIL 246
K LM E IK K GC++
Sbjct: 640 GKWCFRLMQEYGIKPSLKHYGCMV 663
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQ-IRGVKPDAITFVGVLVACSHAGLVDERIS 126
KDV T ++I G ++A+ FY++ + ++PD TF VL AC LVD R
Sbjct: 180 KDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC--GTLVDGRRI 237
Query: 127 HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPM 169
H + K G + ++ L+++ R G A L +MP
Sbjct: 238 H--CWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPF 278
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 73/184 (39%), Gaps = 25/184 (13%)
Query: 3 EDSACEEALLLFREVQHKGLTGDKVTMVSLLLAC--------THLGALEVGMWLHPYIMK 54
E C LLL E++ D T +L AC H A ++G + ++
Sbjct: 200 EAIGCFYQLLLVSEIR-----PDFYTFPPVLKACGTLVDGRRIHCWAFKLGFQWNVFVAA 254
Query: 55 KNIEVDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
I + G M +D+ + A+I L G +AL+ EM++ G+K
Sbjct: 255 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 314
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
+ +T V +L C G + + +L K+G+ + L+ + + G + A +
Sbjct: 315 NFVTVVSILPVCPQLGDISTAML-IHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKA 373
Query: 164 IKNM 167
+ M
Sbjct: 374 FQQM 377
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 166/402 (41%), Positives = 236/402 (58%), Gaps = 53/402 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ EAL F ++ + ++ TMVS L AC++L AL+ G W+H YI + NI+++
Sbjct: 385 YVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMN 444
Query: 61 VGLGMALKD-----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQ 97
L +L D V A+I AM G+ +A+ F +M+
Sbjct: 445 DRLLASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMK 504
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+ V P+ +TF+ +L ACSH +V E S+F LM+ YGI P IEHYGC+V +L R+G +
Sbjct: 505 VEKVSPNKVTFIALLNACSHGYMVKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHL 564
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+EE+I +MPMA D + G LL ACRI+ ++E R + + E+ P++ G V+L N Y
Sbjct: 565 KDSEEMILSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIY 624
Query: 218 SSSRKWKKVKRIR---ELMAERNIKKPPGCILIEVDGVVHEFVK---------------- 258
S+S +W + + +R E+ ++R KK PG IE++GV HEF+
Sbjct: 625 STSGRWNEARMVREKNEINSDR--KKIPGFSSIELNGVFHEFLVGDRSHPQSREIYSFLD 682
Query: 259 --------AGFVPNKSEVLFDM-DEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNL 309
AG+VP EVL D DEE+KETAL++H+EKLAI FGL++ PG IRI+KNL
Sbjct: 683 EMISKLKIAGYVPELGEVLLDFDDEEDKETALSVHSEKLAIAFGLMNTAPGTPIRIVKNL 742
Query: 310 RVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDF 351
RVC DCH AT ISKVY+R +V DR R+HHFK+G CSCKD+
Sbjct: 743 RVCGDCHQATKFISKVYDRVIIVRDRMRYHHFKDGICSCKDY 784
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
M +DV++ + +I G +AL++F++M VKP+ T V L ACS+ +D+
Sbjct: 370 MHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAACSNLVALDQG 429
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACR 184
++ + I+ + L+ + + G I A + + + ++G
Sbjct: 430 -KWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFA 488
Query: 185 IHDNLEAAERAAQQL-LELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAE 235
+H E A +++ +E + N +++ L N S K+ K ELMA
Sbjct: 489 MHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHGYMVKEGKSYFELMAS 540
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 155/405 (38%), Positives = 235/405 (58%), Gaps = 53/405 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGD-------KVTMVSLLLACTHLGALEVGMWLHPYIM 53
+ D +L L+ ++ KGL D +V+++S+LLAC +LGAL G W H Y++
Sbjct: 552 FATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVI 611
Query: 54 KKNIEVDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALE 91
+ E D+ + A+ KD++ +A+I + G G KA++
Sbjct: 612 QTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAID 671
Query: 92 YFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYIL 151
F +M GV+P +TF VL ACSH+GL++E +F LM+E++ I + +Y C+V +L
Sbjct: 672 LFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLL 731
Query: 152 GRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYV 211
GRAG++++A +LI+NMP+ D + G LLGACRIH+NL+ AE+ A L L P + G +V
Sbjct: 732 GRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHV 791
Query: 212 ILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF--------------- 256
+LSN Y++ +W +V+++R++MA R K G L+E D VH+F
Sbjct: 792 LLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYA 851
Query: 257 ---------VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIK 307
G+VP VL D++EE KE AL+ H+E+LAI FGL++ PG +RI K
Sbjct: 852 KLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITK 911
Query: 308 NLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
NLR+C DCH A +ISK+ NR +V D +RFH F++G CSC D+W
Sbjct: 912 NLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 956
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 15/212 (7%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + A EAL LF E+ K + VT+VS L AC LE G +H +
Sbjct: 247 YANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAV------- 299
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
KDV++ AL+ A G K++ F M G++PDA+ V +L A S G+
Sbjct: 300 ------WKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGI 353
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLL 180
+ + + + G ++ L+ + + G + A +L K M + D + ++
Sbjct: 354 FQQALCLHGYVV-RSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGM-IVRDVVIWSSMI 411
Query: 181 GACRIHDNLEAAERAAQQLLELLPDNGGSYVI 212
A IH A Q+++++ Y I
Sbjct: 412 AAYGIHGRGGEALEIFDQMIQVMQGITSCYQI 443
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 70/169 (41%), Gaps = 13/169 (7%)
Query: 1 YVEDSACEEALLLFR-EVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y + EE L LF + G D T+ L AC L LE+G +H + KKN E+
Sbjct: 77 YCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGF-AKKNDEI 135
Query: 60 DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
D+ +AL+ + + CGQ +AL+ F E Q +PD + + ++
Sbjct: 136 G-------SDMFVGSALVELYSKCGQMGEALKVFEEFQ----RPDTVLWTSMVTGYQQNN 184
Query: 120 LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
+E ++ F+ M + L+ + + G A L MP
Sbjct: 185 DPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMP 233
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 14/117 (11%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y +++ EEAL LF + V GD + SLL G + I
Sbjct: 180 YQQNNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGC-------------EKIAA 226
Query: 60 DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACS 116
++ M KDV++ + +I A N+AL F+EM + +P+++T V L AC+
Sbjct: 227 NLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACA 283
>gi|356518836|ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 568
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 162/393 (41%), Positives = 231/393 (58%), Gaps = 48/393 (12%)
Query: 8 EEALLLFREVQHK--GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGM 65
+EAL LF+++Q K + D V M+S++ A + LGALE+G+W+H +I + + + V LG
Sbjct: 176 DEALTLFQQMQLKESDILPDGVVMLSVISAVSSLGALELGIWVHAFISRIGVNLTVSLGS 235
Query: 66 AL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
AL ++V+T TALI LA+ G+G +ALE FY+M G+KP
Sbjct: 236 ALIDMYSRCGDIDRSVKVFDEMPHRNVVTWTALINGLAVHGRGREALEAFYDMVESGLKP 295
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
D I F+GVLVACSH GLV+E F+ M +YGI P++EHYGC+V +LGRAG + +A +
Sbjct: 296 DRIAFMGVLVACSHGGLVEEGRRVFSSMWSEYGIEPALEHYGCMVDLLGRAGMVLEAFDF 355
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
++ M + + + LLGAC H+ L AE+A +++ EL P + G YV+LSN Y W
Sbjct: 356 VEGMRVRPNSVIWRTLLGACVNHNLLVLAEKAKERIKELDPHHDGDYVLLSNAYGGVGNW 415
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------------A 259
K + +R M E I K PG L+ +D V HEFV
Sbjct: 416 VKKEGVRNSMRESKIVKEPGLSLVHIDQVAHEFVSGDNSHPQWEEITRFLGSVIDTVKLG 475
Query: 260 GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
G+ P+ VL D+ EEEKE +L H+EKLA+ F L+ IR+IKNLR+C DCH+
Sbjct: 476 GYTPSTKNVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKTIRVIKNLRICYDCHSFM 535
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+S ++R+ V+ DR+RFHHF+ GSCSC+DFW
Sbjct: 536 KHVSGFFDRDIVIRDRSRFHHFRKGSCSCRDFW 568
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 159/398 (39%), Positives = 223/398 (56%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++S EAL LF E+Q + D +TM LL AC L ALE+G +H I++ +
Sbjct: 831 YSKNSLPNEALKLFAEMQKESRP-DGITMACLLPACGSLAALEIGRGIHGCILRNGYSSE 889
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL KD++T T +I M G GN+A+ F +M+I
Sbjct: 890 LHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRI 949
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD ITF +L ACSH+GL++E FN M + + P +EHY C+V +L R G ++
Sbjct: 950 AGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLS 1009
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
KA LI+ MP+ D + G LL CRIH ++E AE+ A+ + EL PDN G YV+L+N Y+
Sbjct: 1010 KAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYA 1069
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ KW++VK++RE + +R +KK PGC IEV G FV A
Sbjct: 1070 EAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRI 1129
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G P L + + EKE AL H+EKLA+ FG+++ G IR+ KNLRVC+D
Sbjct: 1130 KMKNEGHSPKMRYALINAGDMEKEVALCGHSEKLAMAFGILNLPSGRTIRVAKNLRVCDD 1189
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH +SK RE ++ D NRFHHFK+G CSC+DFW
Sbjct: 1190 CHEMAKFMSKTTRREIILRDSNRFHHFKDGFCSCRDFW 1227
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 23/137 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV + ++A+ LF E++ KG++ D +M S+L AC +L+ G +H YI K N+ +
Sbjct: 730 YVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALC 789
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL KD+++ +I + N+AL+ F EMQ
Sbjct: 790 LPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQ- 848
Query: 99 RGVKPDAITFVGVLVAC 115
+ +PD IT +L AC
Sbjct: 849 KESRPDGITMACLLPAC 865
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 22/121 (18%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG-------------------- 64
D T+V+ + AC ++G+L +G LH +K +V
Sbjct: 653 DLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAF 712
Query: 65 --MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
M K V++ T+LI G + A+ FYEM+ +GV PD + VL AC+ +D
Sbjct: 713 EKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLD 772
Query: 123 E 123
+
Sbjct: 773 K 773
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 22/133 (16%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK-------------- 54
E++ LF+++Q G+TG+ T +L LG + +H + K
Sbjct: 536 ESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLI 595
Query: 55 ----KNIEVDVGLGM----ALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
K+ EVD + +DV++ ++I M G + ALE+F +M I V D
Sbjct: 596 ATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLA 655
Query: 107 TFVGVLVACSHAG 119
T V + AC++ G
Sbjct: 656 TLVNSVAACANVG 668
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 154/396 (38%), Positives = 231/396 (58%), Gaps = 44/396 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV- 59
+ ++S +EAL LF+ ++ G + T+ S+L ACT L LE+G +H +++K + ++
Sbjct: 139 FAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLKYDQDLI 198
Query: 60 -------------------DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG 100
V + M KDV++ + +I LA G +AL+ F M++ G
Sbjct: 199 LNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLG 258
Query: 101 VKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA 160
+KP+ +T VGVL ACSHAGLV+E + +F+ M E +GI P EHYGC++ +LGRAGR+++A
Sbjct: 259 IKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEA 318
Query: 161 EELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSS 220
+LI M D LL ACR+H N++ A AA+Q+L L P + G+YV+LSN Y+++
Sbjct: 319 VDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYANT 378
Query: 221 RKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV----------------------- 257
++W V +R M R IKK PGC IEV +H F+
Sbjct: 379 QRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGDRSHPQIREINIQLNQLIYKL 438
Query: 258 -KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCH 316
G+VP+ + VL D++ E+ + +L H+EKLAI FGL+S G IRI KNLR+C DCH
Sbjct: 439 MGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVFGLMSLPRGQTIRIRKNLRICGDCH 498
Query: 317 TATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
T +++K+ R V+ D R+HHF++G CSC DFW
Sbjct: 499 LFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 162/397 (40%), Positives = 230/397 (57%), Gaps = 47/397 (11%)
Query: 2 VEDSACEEALLLFREVQ-HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
V+ S EEA+ +F +Q +G+ D VTM+S+ AC HLGAL++ W++ YI K I++D
Sbjct: 445 VQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLD 504
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG L +DV TA I +AM G +A+E F +M
Sbjct: 505 VRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIE 564
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+G+KPD + FVG L ACSH GLV + F M + +G+ P HYGC+V +LGRAG +
Sbjct: 565 QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLE 624
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI++MPM + + LL ACR+ N+E A AA+++ L P+ GSYV+LSN Y+
Sbjct: 625 EAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYA 684
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
S+ +W + ++R M E+ ++KPPG I++ G HEF
Sbjct: 685 SAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQ 744
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G VP+ S VL D+DE+EK L+ H+EKLA+ +GL+S G IRI+KNLRVC+D
Sbjct: 745 RASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSD 804
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDF 351
CH+ SKVYNRE ++ D NRFH+ + G CSC DF
Sbjct: 805 CHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 94/223 (42%), Gaps = 23/223 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y C EA+LLF + + G++ DK T L AC A G+ +H I+K
Sbjct: 109 YASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK------ 162
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+G A KD+ +L+ A CG+ + A + F EM R V +++ ++ +
Sbjct: 163 --MGYA-KDLFVQNSLVHFYAECGELDSARKVFDEMSERNV----VSWTSMICGYARRDF 215
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE---LIKNMPMALDHFVLG 177
+ + F M + P+ C++ + + E+ I+N + ++ ++
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 178 GLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSS 220
L+ + ++ A+R L + G S + L N +S+
Sbjct: 276 ALVDMYMKCNAIDVAKR-------LFDEYGASNLDLCNAMASN 311
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 22/136 (16%)
Query: 4 DSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL 63
D A + L FR V+ + +T + VTMV ++ AC L LE G ++ +I IEV+ +
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 64 GMALKDV-MTLTALIVV-----------LAMC----------GQGNKALEYFYEMQIRGV 101
AL D+ M A+ V L +C G +AL F M GV
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV 333
Query: 102 KPDAITFVGVLVACSH 117
+PD I+ + + +CS
Sbjct: 334 RPDRISMLSAISSCSQ 349
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 83/223 (37%), Gaps = 59/223 (26%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------ 54
YV EAL +F + G+ D+++M+S + +C+ L + G H Y+++
Sbjct: 312 YVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW 371
Query: 55 -------------------------------------------KNIEVDVGL----GMAL 67
+N EVD M
Sbjct: 372 DNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR-GVKPDAITFVGVLVACSHAGLVD--ER 124
K++++ +I L +A+E F MQ + GV D +T + + AC H G +D +
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKW 491
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
I ++ EK GI+ + LV + R G A + ++
Sbjct: 492 IYYY---IEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 160/399 (40%), Positives = 222/399 (55%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIM-KKNIEV 59
Y + EAL LFR + G+ D+V ++ L A LG E G WLH Y+ + +++
Sbjct: 237 YTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQL 296
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ +G AL KD++ A+I AM G KALE F +++
Sbjct: 297 NARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLR 356
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+G+ P ITF+G+L ACSH+GLVDE F M E+Y I P IEHYGC+V +LGRAG I
Sbjct: 357 SQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLI 416
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A L+++M +A D + LL ACR+H N+ ++ A L+ N G Y++LSN Y
Sbjct: 417 EEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIY 476
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
++ W++V R+R +M I+K PGC IEV V+EFV
Sbjct: 477 AAVGNWEEVARVRSMMKASGIQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKMN 536
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ G VP VL D+DE KE AL +H+EKLA+ FGL+S PG I+I+KNLR C
Sbjct: 537 GIVKEQGHVPQTELVLHDLDEVTKEKALAVHSEKLAVAFGLISTAPGETIKIVKNLRACA 596
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH +ISK+ R+ V DRNRFHHF +GSC+C D+W
Sbjct: 597 DCHAVLKLISKITGRKIVFRDRNRFHHFVDGSCTCGDYW 635
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 160/399 (40%), Positives = 222/399 (55%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIM-KKNIEV 59
Y + EAL LFR + G+ D+V ++ L A LG E G WLH Y+ + +++
Sbjct: 236 YTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQL 295
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ +G AL KD++ A+I AM G KALE F +++
Sbjct: 296 NARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLR 355
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+G+ P ITF+G+L ACSH+GLVDE F M E+Y I P IEHYGC+V +LGRAG I
Sbjct: 356 SQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLI 415
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A L+++M +A D + LL ACR+H N+ ++ A L+ N G Y++LSN Y
Sbjct: 416 EEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIY 475
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
++ W++V R+R +M I+K PGC IEV V+EFV
Sbjct: 476 AAVGNWEEVARVRSMMKASGIQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKMN 535
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ G VP VL D+DE KE AL +H+EKLA+ FGL+S PG I+I+KNLR C
Sbjct: 536 GIVKEQGHVPQTELVLHDLDEVTKEKALAVHSEKLAVAFGLISTAPGETIKIVKNLRACA 595
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH +ISK+ R+ V DRNRFHHF +GSC+C D+W
Sbjct: 596 DCHAVLKLISKITGRKIVFRDRNRFHHFVDGSCTCGDYW 634
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 156/389 (40%), Positives = 224/389 (57%), Gaps = 47/389 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LF +Q +G+ +++S+L C L +L+ G +H +++ ++D+ + L
Sbjct: 180 EALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLI 239
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
KD++ ++I A G G KALE F++M + PD I
Sbjct: 240 TMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEI 299
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF+GVL ACS+ G V E + F M KY + P EHY C+V +LGRAG++ +A LI+N
Sbjct: 300 TFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIEN 359
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP+ D V G LLGACR H NL+ AE AA++LL+L P+N G Y++LSN YSS +WK V
Sbjct: 360 MPVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDV 419
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------------KAGF 261
+R+ M +N++K PGC IEVD VH F +AG+
Sbjct: 420 VELRKTMRAKNLRKSPGCSWIEVDKKVHIFSGGGSTSHPEHEMILKKLGKLGALLREAGY 479
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P+ S V+ D+DEEEK +L H+EKLA+ +GL+ G+ IR++KNLRVC D H+ +
Sbjct: 480 CPDGSFVMHDVDEEEKVHSLRDHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDSHSTIKL 539
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKD 350
I++V RE ++ D NRFHHFK+G CSC D
Sbjct: 540 IAQVTGREIILRDTNRFHHFKDGLCSCSD 568
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 157/398 (39%), Positives = 228/398 (57%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV ++ EA+ L+ ++Q G+ D V++ S+L AC L A +G +H Y+ +K + +
Sbjct: 281 YVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPN 340
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L AL +DV++ T++I M GQG A+ F +M+
Sbjct: 341 LLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRD 400
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G PD I FV VL ACSHAGLVDE FNLM+E YGI P IEHY C+V +LGRAG+I
Sbjct: 401 SGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAE-YGITPGIEHYNCMVDLLGRAGKID 459
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A L + MPM + V G LL ACR++ ++ A AA L +L P+ G YV+LSN Y+
Sbjct: 460 EAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYA 519
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ +W+ V+ +R +M + IKK PG +E++ V+ F+
Sbjct: 520 KAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVG 579
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G++P L D++EE+KE L +H+EKLAI F +++ PG IRI KN+RVC D
Sbjct: 580 RMKELGYMPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRVCGD 639
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT +ISK+ RE ++ D +RFHHF++G CSC D+W
Sbjct: 640 CHVATKLISKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +AL L RE++ L D TM SLL A T+ V Y+ D
Sbjct: 213 YAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNV-----LYVK------D 261
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACS--HA 118
+ + + K +++ +I V N+A++ + +MQ+ GV+PDA++ VL AC A
Sbjct: 262 MFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSA 321
Query: 119 GLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
++ RI + E+ +RP++ L+ + + G + +A + M
Sbjct: 322 AVLGRRIHEY---VERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQM 367
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 22/141 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV + ++ALL+F+ + ++G D T +L AC+ G L VG+ +H ++K ++++
Sbjct: 112 YVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMN 171
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G L +D+++ +++ A G+ N AL+ EM+
Sbjct: 172 LYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMED 231
Query: 99 RGVKPDAITFVGVLVACSHAG 119
+KPDA T +L A ++
Sbjct: 232 LKLKPDAGTMGSLLPAVTNTS 252
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 296 bits (759), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 220/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EE L LF E+ G ++ +L C + ALE GM LH +++ V
Sbjct: 358 YSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG 417
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL +DV++ +I A G G +ALE F M+
Sbjct: 418 CFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRT 477
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
KPD IT VGVL ACSH+GLV++ IS+F M +G+ EHY C++ +LGRAGR+A
Sbjct: 478 TSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLA 537
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +L+K+MP D + G LLGA RIH N E AA+++ EL P+N G YV+LSN Y+
Sbjct: 538 EAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYA 597
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
SS KW+ +++R +M ER +KK PG IEV VH F
Sbjct: 598 SSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDM 657
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
KAG+V VL D++EEEKE L H+EKLA+ +G+++ PG IR+IKNLRVC D
Sbjct: 658 RMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGD 717
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A IS + R ++ D NRFHHF+ GSCSC D+W
Sbjct: 718 CHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 296 bits (759), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 220/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EE L LF E+ G ++ +L C + ALE GM LH +++ V
Sbjct: 358 YSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG 417
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL +DV++ +I A G G +ALE F M+
Sbjct: 418 CFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRT 477
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
KPD IT VGVL ACSH+GLV++ IS+F M +G+ EHY C++ +LGRAGR+A
Sbjct: 478 TSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLA 537
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +L+K+MP D + G LLGA RIH N E AA+++ EL P+N G YV+LSN Y+
Sbjct: 538 EAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYA 597
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
SS KW+ +++R +M ER +KK PG IEV VH F
Sbjct: 598 SSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDM 657
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
KAG+V VL D++EEEKE L H+EKLA+ +G+++ PG IR+IKNLRVC D
Sbjct: 658 RMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGD 717
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A IS + R ++ D NRFHHF+ GSCSC D+W
Sbjct: 718 CHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 296 bits (759), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 161/399 (40%), Positives = 226/399 (56%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQH-KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ EA+ ++ +++ G ++ T VS+L A + LGAL+ GM H ++K +
Sbjct: 418 YSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYF 477
Query: 60 DVGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQ 97
D+ + L D+ ++ A+I + G G KA++ F EMQ
Sbjct: 478 DIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQ 537
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GVKPD ITFV +L ACSH+GLVDE F LM E YGIRPS++HYGC+V + GRAG +
Sbjct: 538 SEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHL 597
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA +KNMP+ D V G LLGACRIH+N+E + LL++ +N G YV+LSN Y
Sbjct: 598 EKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIY 657
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
+ W+ V +R L +R +KK PG IEVD + F
Sbjct: 658 AKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLT 717
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+VP+ + VL D++++EKE L H+E+LA+ FG++S P ++I KNLRVC
Sbjct: 718 AKMKSIGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGIISTPPKTTLQIFKNLRVCG 777
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH AT ISK+ RE +V D NRFHHFK+G CSC D+W
Sbjct: 778 DCHNATKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 816
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 24/184 (13%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL----- 63
EAL +F E++ K ++ D VT+ SLL C L + G+ +H Y +K +E D+ +
Sbjct: 223 EALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALI 282
Query: 64 -----------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
M ++D+++ +L+ + AL + +M GV PD +
Sbjct: 283 NMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLL 342
Query: 107 TFVGVL-VACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
T V + VA + R H ++ + I ++ + + G I A ++ +
Sbjct: 343 TLVSLASVAAELGNFLSSRSIH-GFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFE 401
Query: 166 NMPM 169
+P+
Sbjct: 402 GLPV 405
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 27/184 (14%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----------NIEV 59
AL ++ ++ G+ D +T+VSL LG +H ++ ++ N +
Sbjct: 325 ALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAII 384
Query: 60 D-------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ-IRGVKPDA 105
D V G+ +KDV++ +LI + G N+A++ + M+ G P+
Sbjct: 385 DMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQ 444
Query: 106 ITFVGVLVACSHAGLVDERI-SHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
T+V +L A S G + + + +H L+ K + I CLV + G+ G++A A L
Sbjct: 445 GTWVSILTAHSQLGALKQGMKAHGQLI--KNFLYFDIFVSTCLVDMYGKCGKLADALSLF 502
Query: 165 KNMP 168
+P
Sbjct: 503 YEVP 506
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 34/172 (19%)
Query: 22 LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG----------------- 64
L D T ++ AC G L+ G +H ++K E DV +
Sbjct: 138 LQSDHYTFPPVIRAC---GNLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLAC 194
Query: 65 -----MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
M ++D+ T A+I + G+ +ALE F EM+ + V D++T +L C
Sbjct: 195 NLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQ-- 252
Query: 120 LVDERISHFNLMSEKYGIRPSIEH--YGC--LVYILGRAGRIAKAEELIKNM 167
+D+ IS ++ Y I+ +E + C L+ + + G + AE + M
Sbjct: 253 -LDDIIS--GVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQM 301
>gi|218200771|gb|EEC83198.1| hypothetical protein OsI_28453 [Oryza sativa Indica Group]
Length = 639
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 154/370 (41%), Positives = 216/370 (58%), Gaps = 47/370 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LF +Q G+ D +V +L+AC LG LE G W+H Y+ NI + V LG AL
Sbjct: 119 EALGLFARMQADGVIPDDTVLVGVLVACAQLGVLEQGKWVHGYLKANNIRITVFLGTALV 178
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
K+V+ T +I LAM G+G++ALE F +M+ GVKPD I
Sbjct: 179 DMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDI 238
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
F+G L AC+H GLVD+ F+ M KYGI+P IEHYGC+V +L R G + +A E+++
Sbjct: 239 AFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEK 298
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MPM D + G L+ CR H N+E AE + +EL PD G+YV+L N Y++S +
Sbjct: 299 MPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASA 358
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------------KAGF 261
+ IR LM E+ + K PGC +E+ GV+H+F+ + G+
Sbjct: 359 REIRHLMREKGVDKTPGCSTVEIKGVIHQFIVGDLSHPFIEEILSKWDEIDSRIRLEEGY 418
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+K EVL D++EEEKE AL+ H+EK+AI F L++ + IRI+KNLRVC+DCH T +
Sbjct: 419 VPDKKEVLLDIEEEEKENALSRHSEKMAIAFALINTSDDMPIRIVKNLRVCHDCHHVTKL 478
Query: 322 ISKVYNRETV 331
ISKV++ V
Sbjct: 479 ISKVFDLTVV 488
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 82 MCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPS 140
+ G G +AL F MQ GV PD VGVLVAC+ G++++ + H L + IR +
Sbjct: 113 LAGDGREALGLFARMQADGVIPDDTVLVGVLVACAQLGVLEQGKWVHGYLKANN--IRIT 170
Query: 141 IEHYGCLVYILGRAGRIAKAEELIKNM 167
+ LV + + G + A E+ K M
Sbjct: 171 VFLGTALVDMYAKCGEMQLAMEVFKVM 197
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 296 bits (758), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 162/397 (40%), Positives = 223/397 (56%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
+E+ E A +F +++ G+ D+ T+ +L A + L ALE G +H +K N D
Sbjct: 594 IENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDP 653
Query: 62 GLGMALKDV-------------------MTLTA---LIVVLAMCGQGNKALEYFYEMQIR 99
+G +L D+ M +TA ++V LA G+G + L+ F +M+
Sbjct: 654 FVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSL 713
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G+KPD +TF+GVL ACSH+GLV E H M YGI+P IEHY CL LGRAG + +
Sbjct: 714 GIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQ 773
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
AE LI++M M + LL ACR+ + E +R A +LLEL P + +YV+LSN Y++
Sbjct: 774 AENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAA 833
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
+ KW ++K R +M +KK PG IEV +H FV
Sbjct: 834 ASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRD 893
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+ G+VP L D++EEEKE AL H+EKLA+ FGL+S P IR+IKNLRVC DC
Sbjct: 894 IKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDC 953
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H A I+KVYNRE V+ D NRFH FK+G CSC D+W
Sbjct: 954 HNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 229/398 (57%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YVE+ EA F ++ + D VT ++LL AC HLGAL+VGM ++ +K ++
Sbjct: 436 YVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSH 495
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL +DV+T A+I ++ G +AL F M
Sbjct: 496 VPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLK 555
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+P+++TFVGVL ACS AG VDE F + E GI P+++ YGC+V +LGRAG +
Sbjct: 556 ERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELD 615
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE LIK+MP+ + LL ACRIH NL+ AERAA++ L + P +G YV LS+ Y+
Sbjct: 616 EAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYA 675
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ W+ V ++R++M R I+K GC IEV G VH FV
Sbjct: 676 AAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMN 735
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G++P VL D+ E++KE A++ H+EKLAI +G++S G IRI KNLRVC+D
Sbjct: 736 AIKREGYIPITQNVLHDVGEQQKEEAISYHSEKLAIAYGVLSLPSGTPIRIYKNLRVCSD 795
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A+ ISKV RE + D +RFHHFK+G CSC D+W
Sbjct: 796 CHSASKFISKVTGREIIARDASRFHHFKDGVCSCGDYW 833
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 25/190 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EA LFR++ +GL +T +S+L AC+ L G +H ++ D
Sbjct: 133 YAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSD 192
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL +DV T ++ A G KA E FY MQ
Sbjct: 193 FRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQ 252
Query: 99 RGVKPDAITFVGVLVAC-SHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G+KP+ I+F+ +L C + L + H M+ G+ I L+ + G I
Sbjct: 253 VGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNA--GLVDDIRVATSLIRMYTTCGSI 310
Query: 158 AKAEELIKNM 167
A + NM
Sbjct: 311 EGARRVFDNM 320
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 90/214 (42%), Gaps = 24/214 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E+ E+A LF +Q +G+ D++T + ++ AC L +H + D
Sbjct: 335 YAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTD 394
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL +DV++ +A+I G G +A E F+ M+
Sbjct: 395 LLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKR 454
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
++PD +T++ +L AC H G +D + + + K + + L+ + + G +
Sbjct: 455 SNIEPDGVTYINLLNACGHLGALDVGMEIYT-QAIKADLVSHVPLGNALIIMNAKHGSVE 513
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAA 192
+A + M + D ++G +H N A
Sbjct: 514 RARYIFDTM-VRRDVITWNAMIGGYSLHGNAREA 546
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 25/191 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + E+A LF +Q GL +K++ +S+L C AL G +H M + D
Sbjct: 234 YAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDD 293
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + M ++DV++ T +I A G A F MQ
Sbjct: 294 IRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQE 353
Query: 99 RGVKPDAITFVGVLVACS-HAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G++PD IT++ ++ AC+ A L R H + +G + LV++ + G I
Sbjct: 354 EGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVST--ALVHMYAKCGAI 411
Query: 158 AKAEELIKNMP 168
A ++ MP
Sbjct: 412 KDARQVFDAMP 422
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSH-AGL 120
K V+T ALI A G +A F +M G++P ITF+ VL ACS AGL
Sbjct: 121 KTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGL 174
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 157/398 (39%), Positives = 223/398 (56%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEAL LF +++ G ++ + L +C + ALE+G LH ++K +
Sbjct: 380 YAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTG 439
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
G AL KD+++ +I A G G +AL F M++
Sbjct: 440 YIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKM 499
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+KPD +T VGVL ACSH GLVD+ + +FN M + YGI + +HY C++ +LGRAGR+
Sbjct: 500 T-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLD 558
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A L+K+MP D G LLGA RIH + E E+AA+++ E+ PDN G YV+LSN Y+
Sbjct: 559 EALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYA 618
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+S +W++V+ +R M ++ +KK PG +E+ H F
Sbjct: 619 ASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDL 678
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K GFV + VL D++EEEKE L H+EKLA+ FG++S PG IR+IKNLRVC D
Sbjct: 679 ELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCED 738
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ISK+ R+ +V D NRFHHF GSCSC D+W
Sbjct: 739 CHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 220/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EE L LF E+ G ++ +L C + ALE GM LH +++ V
Sbjct: 233 YSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG 292
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL +DV++ +I A G G +ALE F M+
Sbjct: 293 CFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRT 352
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
KPD IT VGVL ACSH+GLV++ IS+F M +G+ EHY C++ +LGRAGR+A
Sbjct: 353 TSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLA 412
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +L+K+MP D + G LLGA RIH N E AA+++ EL P+N G YV+LSN Y+
Sbjct: 413 EAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYA 472
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
SS KW+ +++R +M ER +KK PG IEV VH F
Sbjct: 473 SSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDM 532
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
KAG+V VL D++EEEKE L H+EKLA+ +G+++ PG IR+IKNLRVC D
Sbjct: 533 RMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGD 592
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A IS + R ++ D NRFHHF+ GSCSC D+W
Sbjct: 593 CHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 630
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 158/391 (40%), Positives = 221/391 (56%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E A+ LF E+ KGL D + SLL AC L A E G +H +++K+ D G AL
Sbjct: 487 EGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNAL 546
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+ V++ +A+I LA G G +ALE F M G+ P+
Sbjct: 547 VYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNH 606
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
IT VL AC+HAGLVDE +FN M E +GI + EHY C++ +LGRAG++ A EL+
Sbjct: 607 ITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVN 666
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MP + + G LLGA R+H + E + AA++L L P+ G++V+L+N Y+S+ W +
Sbjct: 667 SMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNE 726
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
V ++R+LM + NIKK P IEV VH F+ KAGF
Sbjct: 727 VAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGF 786
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VPN L D+D EKE L+ H+E+LA+ F L+S PG IR+ KNLR+C DCH A
Sbjct: 787 VPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKF 846
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISK+ +RE ++ D NRFHHF++G+CSC D+W
Sbjct: 847 ISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ C +A+ +F E+ G+ + ++ ACT +E G +H +++ + D
Sbjct: 177 YVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKD 236
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V AL DV++ ALI + G ++A+E +M+
Sbjct: 237 VFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKY 296
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
G+ P+ T +L ACS AG D
Sbjct: 297 SGLVPNVFTLSSILKACSGAGAFD 320
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 25/184 (13%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+EAL LF E++ +GL ++ T+ ++L + L A +H +K D + L
Sbjct: 386 DEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGL 445
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D++ T++I L+ C G A++ F EM +G++PD
Sbjct: 446 IDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 505
Query: 106 ITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+L AC+ ++ + H +L+ ++ LVY + G I AE
Sbjct: 506 FVLSSLLNACASLSAYEQGKQVHAHLIKRQF--MSDAFAGNALVYTYAKCGSIEDAELAF 563
Query: 165 KNMP 168
++P
Sbjct: 564 SSLP 567
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 22/125 (17%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-- 67
A+ L ++++ GL + T+ S+L AC+ GA ++G +H +++K N + D +G+ L
Sbjct: 287 AIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVD 346
Query: 68 --------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
+D++ ALI + G+ ++AL FYE++ G+ + T
Sbjct: 347 MYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTT 406
Query: 108 FVGVL 112
VL
Sbjct: 407 LAAVL 411
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 158/391 (40%), Positives = 221/391 (56%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E A+ LF E+ KGL D + SLL AC L A E G +H +++K+ D G AL
Sbjct: 487 EGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNAL 546
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+ V++ +A+I LA G G +ALE F M G+ P+
Sbjct: 547 VYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNH 606
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
IT VL AC+HAGLVDE +FN M E +GI + EHY C++ +LGRAG++ A EL+
Sbjct: 607 ITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVN 666
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MP + + G LLGA R+H + E + AA++L L P+ G++V+L+N Y+S+ W +
Sbjct: 667 SMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNE 726
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
V ++R+LM + NIKK P IEV VH F+ KAGF
Sbjct: 727 VAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGF 786
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VPN L D+D EKE L+ H+E+LA+ F L+S PG IR+ KNLR+C DCH A
Sbjct: 787 VPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKF 846
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISK+ +RE ++ D NRFHHF++G+CSC D+W
Sbjct: 847 ISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ C +A+ +F E+ G+ + ++ ACT +E G +H +++ + D
Sbjct: 177 YVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKD 236
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V AL DV++ ALI + G ++A+E +M+
Sbjct: 237 VFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKY 296
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
G+ P+ T +L ACS AG D
Sbjct: 297 SGLVPNVFTLSSILKACSGAGAFD 320
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 25/184 (13%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+EAL LF E++ +GL ++ T+ ++L + L A +H +K D + L
Sbjct: 386 DEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGL 445
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D++ T++I L+ C G A++ F EM +G++PD
Sbjct: 446 IDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 505
Query: 106 ITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+L AC+ ++ + H +L+ ++ LVY + G I AE
Sbjct: 506 FVLSSLLNACASLSAYEQGKQVHAHLIKRQF--MSDAFAGNALVYTYAKCGSIEDAELAF 563
Query: 165 KNMP 168
++P
Sbjct: 564 SSLP 567
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 22/125 (17%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-- 67
A+ L ++++ GL + T+ S+L AC+ GA ++G +H +++K N + D +G+ L
Sbjct: 287 AIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVD 346
Query: 68 --------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
+D++ ALI + G+ ++AL FYE++ G+ + T
Sbjct: 347 MYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTT 406
Query: 108 FVGVL 112
VL
Sbjct: 407 LAAVL 411
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 154/391 (39%), Positives = 221/391 (56%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E+A+ LF ++ KGL D + SLL ACT L A E G +H +++K+ DV G AL
Sbjct: 492 EDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNAL 551
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+ +++ +A+I LA G G +AL+ F+ M GV P+
Sbjct: 552 VYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNH 611
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
IT VL AC+HAGLVD+ +F M E +GI + EHY C++ ILGRAG++ A EL+
Sbjct: 612 ITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVN 671
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
NMP + V G LLGA R+H + E AA++L L P+ G++V+L+N Y+S+ W +
Sbjct: 672 NMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDE 731
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
+ ++R+LM + N+KK P +E+ VH F+ KAG+
Sbjct: 732 MAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLMNKAGY 791
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VPN L D+D EKE L+ H+E+LA+ F L+S G IR+ KNLR+C DCH A
Sbjct: 792 VPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPSGAPIRVKKNLRICRDCHVAFKY 851
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISK+ +RE ++ D NRFHHF NG+CSC D+W
Sbjct: 852 ISKIVSREIIIRDINRFHHFTNGTCSCGDYW 882
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 29/159 (18%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ +A+ +FRE+ G ++ ++ ACT LE G +H +++ E D
Sbjct: 180 YVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKD 239
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V AL DV++ A I G ++ALE +M+
Sbjct: 240 VFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKS 299
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGI 137
G+ P+ T VL AC+ AG FNL + +G
Sbjct: 300 SGLVPNVFTLSSVLKACAGAGA-------FNLGRQIHGF 331
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE-RISH 127
D+++ T ++ L+ C G A++ F +M +G++PD+ +L AC+ ++ + H
Sbjct: 474 DIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVH 533
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
+L+ ++ + LVY + G I A+ +P
Sbjct: 534 AHLIKRQF--TSDVFAGNALVYAYAKCGSIEDADMAFSGLP 572
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 13/125 (10%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKD 69
AL L +++ GL + T+ S+L AC GA +G +H +++K + D + + L D
Sbjct: 290 ALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVD 349
Query: 70 VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFN 129
+ + + A + F M R D I + ++ CSH G E +S F+
Sbjct: 350 MYAKHGFL---------DDARKVFDFMPRR----DLILWNALISGCSHDGRHGEVLSLFH 396
Query: 130 LMSEK 134
M ++
Sbjct: 397 RMRKE 401
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 159/398 (39%), Positives = 220/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YVE+ E+ L +F+ + + + +++ S+LL C++L AL +G +H + K + D
Sbjct: 270 YVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKD 329
Query: 61 VG----------------------LGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L M KDV+T A+I A G G KAL F +M+
Sbjct: 330 TTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRN 389
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+KPD ITFV V++AC+HAG VD + +F M +++GI HY C++ +LGRAGR+
Sbjct: 390 GTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLD 449
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A LIK MP + G LLGACRIH NL+ AE AA+ LL L P + YV L+N Y+
Sbjct: 450 EAVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYA 509
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
++ KW +V ++R++M E N+ K PG IE+ V HEF
Sbjct: 510 ATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDG 569
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VP+ L D++EE KE L H+EKLAI FGL+ PG IR+ KNLRVC D
Sbjct: 570 KMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGD 629
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A IS + RE +V D RFHHF+NG CSC D+W
Sbjct: 630 CHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 157/400 (39%), Positives = 234/400 (58%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKG--LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
Y ++ EAL L+ ++ G + + VT+ ++LLAC H GA++ G +H +++ +E
Sbjct: 269 YAQNGLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLE 328
Query: 59 VDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+V +G ++ K++++ +A+I M G G +AL F +M
Sbjct: 329 DNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDM 388
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ G+KP+ ITF+ VL ACSHAGL+ E +N M ++GI P +EHYGC+V +LGRAG
Sbjct: 389 RKSGLKPNYITFITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGC 448
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A LIK M + D + G LL ACRI+ N+E A+ A++L EL N G YV+LSN
Sbjct: 449 LDEAYGLIKEMKVKPDAALWGALLSACRIYKNVELAKICAERLFELDATNSGYYVLLSNI 508
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+ + WK+V+R+R L+ R I+KPPG +E+ G H F
Sbjct: 509 YAEAGMWKEVERMRVLVKTRGIEKPPGYSSVELKGKTHLFYVGDKSHPQYKEIYAYLEKL 568
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
AG+VPN VL D+D EE+E+ L +H+EKLA+ F L++ + G +I +IKNLRVC
Sbjct: 569 LERIHDAGYVPNTGSVLHDLDVEERESMLRIHSEKLAVAFALMNSVQGSVIHVIKNLRVC 628
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A II+K+ RE ++ D RFHHFK+G CSC D+W
Sbjct: 629 TDCHAAIKIITKLTGREIIIRDLKRFHHFKDGLCSCGDYW 668
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/401 (41%), Positives = 228/401 (56%), Gaps = 49/401 (12%)
Query: 1 YVEDSACEEALLLFREVQ-HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y+++ EA+ + +Q H+GL + T VS+L A +HLGAL+ GM +H +K + V
Sbjct: 347 YMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNV 406
Query: 60 DVGLGMALKDVMT----------------------LTALIVVLAMCGQGNKALEYFYEMQ 97
DV +G L D+ A+I L + G G +AL F MQ
Sbjct: 407 DVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQ 466
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G+KPD +TFV +L ACSHAGLVD+ S F++M Y I P +HY C+ +LGRAG++
Sbjct: 467 QEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQL 526
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A I+NMP+ D V G LLGACRIH N+E + A+Q L EL P+N G YV++SN Y
Sbjct: 527 DEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMY 586
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVV--------------HEFVKA---- 259
+ KW V +R L+ +N++K PG IEV V HE ++A
Sbjct: 587 AKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRS 646
Query: 260 --------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
G+V + S VL D++++EKE LN H+E+LAI FG+++ + I KNLRV
Sbjct: 647 LLAKIRSVGYVSDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHIYKNLRV 706
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH AT IS++ RE +V D NRFHHFK+G CSC DFW
Sbjct: 707 CGDCHNATKYISQITEREIIVRDSNRFHHFKDGHCSCGDFW 747
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 3 EDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE---- 58
++ EA+ LF + +G+ GD VT+ S+L C LG + + +H Y +K ++
Sbjct: 146 RNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELF 205
Query: 59 -----VDV----GL---------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG 100
+DV G+ GM +D++T ++I GQ AL+ F M+ G
Sbjct: 206 VCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSG 265
Query: 101 VKPDAITFVGVLVACSHAGLVDERIS---HFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V PD +T V + A + G D R + H +M + + I +V + + I
Sbjct: 266 VSPDVLTLVSLASAIAQGG--DGRSAKSLHCYVMRRGWDVDDIIAG-NAIVDMYAKLSNI 322
Query: 158 AKAEELIKNMPM 169
A+ + +MP+
Sbjct: 323 EAAQRMFDSMPV 334
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/390 (40%), Positives = 224/390 (57%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL----- 63
E+ F+++ +G+ +K+T + +L AC++ AL+ G +H ++K + D+ +
Sbjct: 415 ESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALM 474
Query: 64 -----------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
GM+++DV+T LI L G+G +AL+ + M+ G++P+A
Sbjct: 475 SMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAA 534
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFV VL AC LV+E F MS+ YGI P+ +HY C+V IL RAG + +AE++I
Sbjct: 535 TFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILT 594
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
+P+ + G LL ACRIH N+E ERAA+ L+L P N G YV LS Y+++ W+ V
Sbjct: 595 IPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDV 654
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGFV 262
++R+ M ER +KK PG IE+ G VH FV G+V
Sbjct: 655 AKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLGYV 714
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ V+ D+D+E KE A+ H+EKLAI +GL+S PG IRI KNLRVC DCHTAT I
Sbjct: 715 PDTRFVMHDLDDEGKERAVCHHSEKLAIAYGLISTPPGTPIRISKNLRVCTDCHTATKFI 774
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SK+ RE + D +RFHHFKNG CSC D+W
Sbjct: 775 SKITKREIIARDAHRFHHFKNGECSCGDYW 804
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 23/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E EE+L + + + + ++T +++L AC L ALE G +H +I++ D
Sbjct: 205 YAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSD 264
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL +DV+ +I GQ +A F+ M
Sbjct: 265 VRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLE 324
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV PD T+ VL AC+ G + R + + K G+ + L+ + +AG +
Sbjct: 325 EGVAPDRATYTTVLSACARPGGL-ARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMK 383
Query: 159 KAEELIKNMP 168
A ++ MP
Sbjct: 384 DARQVFDRMP 393
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 23/158 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y +EA LF +Q + L DK T VS+L AC+ L G +H +M+ + D
Sbjct: 104 YAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLAND 163
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G MA +D ++ T L A G G ++L+ ++ M
Sbjct: 164 TTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQ 223
Query: 99 RGVKPDAITFVGVLVAC-SHAGLVDERISHFNLMSEKY 135
V+P IT++ VL AC S A L + H +++ +Y
Sbjct: 224 ERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEY 261
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V+ EEA F + +G+ D+ T ++L AC G L G +H K + D
Sbjct: 306 FVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSD 365
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V G AL +DV++ T L+ A C Q ++ F +M
Sbjct: 366 VRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQ 425
Query: 99 RGVKPDAITFVGVLVACSH 117
+GVK + IT++ VL ACS+
Sbjct: 426 QGVKANKITYMCVLKACSN 444
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 75/193 (38%), Gaps = 26/193 (13%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----- 67
+ + + KG D V LL +C L VG +H +I++ ++ +V + L
Sbjct: 15 VLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYA 74
Query: 68 -----------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVG 110
K V++ +I A G +A F MQ ++PD TFV
Sbjct: 75 HCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVS 134
Query: 111 VLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPM 169
+L ACS +++ R H +M + G+ L+ + + G + A + M
Sbjct: 135 ILSACSSPAVLNWGREIHVRVM--EAGLANDTTVGNALISMYAKCGSVRDARRVFDAMA- 191
Query: 170 ALDHFVLGGLLGA 182
+ D L GA
Sbjct: 192 SRDEVSWTTLTGA 204
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 222/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y +D EEAL L+ E+Q +G+ D SLL AC L A E G +H +I+K D
Sbjct: 389 YAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSD 448
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ G +L + +++ +A+I LA G G +AL+ F +M
Sbjct: 449 IFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLK 508
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV P+ IT V VL AC+HAGLV E +FN M +GI P EHY C++ +LGRAG++
Sbjct: 509 VGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLE 568
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A EL+ MP + V G LLGA RIH N++ E+AA+ LL L P+ G++V+L+N Y+
Sbjct: 569 AAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYA 628
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S W KV R+R LM + +KK PG +EV V+ F+
Sbjct: 629 SVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELSD 688
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
KAG+VP L D++ EKE L H+EKLA+ FGL++ PG IR+ KNLR+C D
Sbjct: 689 LLKKAGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAFGLIATPPGAPIRVKKNLRICFD 748
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHT ISK+ +RE +V D NRFHHF+ GSCSC ++W
Sbjct: 749 CHTVLKFISKIVSREIIVRDTNRFHHFREGSCSCGEYW 786
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 25/185 (13%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD------- 60
EEA LF + +G+ ++ T+ ++L + L A + +H +K E D
Sbjct: 295 EEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSL 354
Query: 61 ---------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
V + D++ T+L+ A GQG +AL + EMQ RG+KPD+
Sbjct: 355 IDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDS 414
Query: 106 ITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+L AC+ ++ + H +++ K+G I LV + + G I A
Sbjct: 415 FVCSSLLNACASLSAYEQGKQVHVHIL--KFGFMSDIFAGNSLVNMYAKCGSIEDASCAF 472
Query: 165 KNMPM 169
+P+
Sbjct: 473 SRIPV 477
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 74/188 (39%), Gaps = 35/188 (18%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-- 67
AL L RE+ G+ + T+ S L AC + E+G LH ++K ++ D LG+ L
Sbjct: 196 ALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLID 255
Query: 68 --------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
+D++ A+I + + +A F M G+ + T
Sbjct: 256 MYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTT 315
Query: 108 FVGVL--VACSHAGLVDERISHFNLMS----EKYGIRPSIEHYGCLVYILGRAGRIAKAE 161
VL +A A + +I +L S + Y + I+ Y G+ G + A
Sbjct: 316 LSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTY-------GKCGHVEDAT 368
Query: 162 ELIKNMPM 169
+ + P+
Sbjct: 369 RVFEESPI 376
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/399 (38%), Positives = 232/399 (58%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL FRE+ +G+ + +++S+L C L L+ G +H +++ + ++D
Sbjct: 308 YEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMD 367
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V AL KD++ ++I A G G +AL F++M++
Sbjct: 368 VFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRL 427
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD IT++G L ACS+ G V E FN M+ IRP EHY C+V +LGR+G +
Sbjct: 428 AGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVE 487
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LIKNMP+ D + G L+GACR+H N E AE AA++LLEL P N G YV+LS+ Y+
Sbjct: 488 EAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYT 547
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
S +W+ ++R+ ++ RN+ K PGC IE D VH F
Sbjct: 548 SVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLD 607
Query: 257 ---VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+++G+ + S VL D+DEE+K +L H+E+ A+ +GL+ G+ IR++KNLRVC
Sbjct: 608 GLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCG 667
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+A +I+K+ +RE V+ D NRFHHFK+G CSC+D+W
Sbjct: 668 DCHSAIKLIAKITSREIVLRDANRFHHFKDGFCSCRDYW 706
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/397 (40%), Positives = 225/397 (56%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V + L +FRE+Q KG+ ++VT V +L AC LGALE+G W+H Y+ K +EV+
Sbjct: 233 VRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYMRKCGVEVNR 292
Query: 62 GL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ G+ +KDV T ++I LA+ G+ +A+E F EM
Sbjct: 293 FVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGGLALHGKSIEAVELFSEMLKE 352
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
V+P+ ITFVGVL ACSH GLVD F M +GI P +EHYGC+V ILGR GR+ +
Sbjct: 353 RVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEPEVEHYGCMVDILGRVGRLEE 412
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A + I M + D +L LL AC+IH N+ E+ A+ L E + GS+++LSN Y+S
Sbjct: 413 AFDFIGRMGVEADDKMLCSLLSACKIHKNIGMGEKVAKLLSEHYRIDSGSFIMLSNFYAS 472
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA-------------------- 259
+W +RE M + I K PGC IEV+ +HEF
Sbjct: 473 LGRWSYAAEVREKMEKGGIIKEPGCSSIEVNNAIHEFFSGDLRHPERKRIYKKLEELNYL 532
Query: 260 ----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
G++P L D+D+E+KE AL +H+E+LAI +GLVS +R+ KNLR+C+DC
Sbjct: 533 TKFEGYLPATEVALHDIDDEQKELALAVHSERLAICYGLVSTEAYTTLRVGKNLRICDDC 592
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H +I+K+ R+ VV DRNRFHHF+NG CSCKD+W
Sbjct: 593 HAMIKLIAKITRRKIVVRDRNRFHHFENGECSCKDYW 629
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 5/156 (3%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD-E 123
M +D + T +I L G+ N+ LE F EMQ++GV+P+ +TFV VL AC+ G ++
Sbjct: 217 MGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELG 276
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGAC 183
R H + K G+ + G L+ + R G I +A+ L + + D ++G
Sbjct: 277 RWIHAYM--RKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVK-DVSTYNSMIGGL 333
Query: 184 RIH-DNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+H ++EA E ++ L E + NG ++V + N S
Sbjct: 334 ALHGKSIEAVELFSEMLKERVRPNGITFVGVLNACS 369
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 222/398 (55%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEAL LF +++ G ++ + L +C + ALE+G LH ++K +
Sbjct: 380 YAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTG 439
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
G AL KD+++ +I A G G +AL F M++
Sbjct: 440 YIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKM 499
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+KPD +T VGVL ACSH G VD+ + +FN M + YGI + +HY C++ +LGRAGR+
Sbjct: 500 T-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLD 558
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A L+K+MP D G LLGA RIH + E E+AA+++ E+ PDN G YV+LSN Y+
Sbjct: 559 EALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYA 618
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+S +W++V+ +R M ++ +KK PG +E+ H F
Sbjct: 619 ASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDL 678
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K GFV + VL D++EEEKE L H+EKLA+ FG++S PG IR+IKNLRVC D
Sbjct: 679 ELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCED 738
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ISK+ R+ +V D NRFHHF GSCSC D+W
Sbjct: 739 CHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/398 (39%), Positives = 218/398 (54%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV- 59
YV +S EA+ LF +++ G+ D VT+ SLL AC L AL +G LH YI K N++
Sbjct: 281 YVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPN 340
Query: 60 ---------------------DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
DV M L+DV++ T+++ GQG A+ F +M
Sbjct: 341 LLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLD 400
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G PD+I FV VL ACSH GL+D+ +F +M+E+YGI P IEH+ C+V + GRAG +
Sbjct: 401 SGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVE 460
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A IK MPM + V G LL ACR+H ++ AA L +L P G YV+LSN Y+
Sbjct: 461 EAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYA 520
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ WK V +R M + IKK PG +E++G VH F+
Sbjct: 521 KAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVG 580
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G++P L D++ E+KE L +H+EKLAI F +++ G IRI KNLRVC D
Sbjct: 581 KMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGD 640
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A +ISK+ +R +V D NRFHHF NG CSC D+W
Sbjct: 641 CHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 93/236 (39%), Gaps = 38/236 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV ++ EAL +F+ + D T +L AC+ L L VG+ +H I+K ++ +
Sbjct: 112 YVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTN 171
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL +DV++ +++ A GQ + ALE EM
Sbjct: 172 LFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDS 231
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ DA T + + L E + + + M E+ + ++ + ++ I
Sbjct: 232 LNLNHDAGTMASLSPVVCYTSL--ENVQYIHNMFERM-TKKNLISWNVMIAIYVNNSMPN 288
Query: 159 KAEELIKNMP---MALDHFVLGGLLGAC----------RIHDNLEAAERAAQQLLE 201
+A L M M D + LL AC R+H +E LLE
Sbjct: 289 EAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLE 344
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/399 (40%), Positives = 226/399 (56%), Gaps = 48/399 (12%)
Query: 2 VEDSACEEALLLFREVQHKGLT--GDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
+ ++ +AL LF +Q D VT + LL AC HL ALE G +H YIM++
Sbjct: 181 IRNNRTRDALSLFDVMQGSSYKCEPDDVTCLLLLQACAHLNALEFGERIHGYIMERGYRD 240
Query: 60 DVGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ L GM K+V++ +A+I LAM G G +A+E F EM
Sbjct: 241 ALNLCNSLISMYSRCGCLDKAYEVFKGMGNKNVVSWSAMISGLAMNGYGREAIEAFEEML 300
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV PD TF GVL ACS++G+VDE +S F+ MS ++G+ P++ HYGC+V +LGRAG +
Sbjct: 301 RIGVLPDDQTFTGVLSACSYSGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGRAGLL 360
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA +LI +M + D + LLGACRIH ++ ER L+EL G YV+L N Y
Sbjct: 361 DKAYQLIMSMVVKPDSTMWRTLLGACRIHGHVTLGERVIGHLIELKAQEAGDYVLLLNIY 420
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------- 258
SS+ W+KV +R+LM ++I+ PGC IE+ G VHEFV
Sbjct: 421 SSAGHWEKVAEVRKLMKNKSIQTTPGCSTIELKGAVHEFVVDDVSHSRNREIYETLDEIN 480
Query: 259 -----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
AG+V S L MD++EK L+ H+EKLA+ FG+++ PG ++R+ NLRVC
Sbjct: 481 HQLRIAGYVVELSSELHKMDDKEKGYVLSHHSEKLAVAFGVLATPPGTILRVASNLRVCV 540
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH + S VYNR+ V+ D NRFHHF+ G CSC D+W
Sbjct: 541 DCHNFLKLFSGVYNRDVVLRDHNRFHHFRGGRCSCSDYW 579
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 47/195 (24%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
++ LLL+R+++ +G+ D ++ + +C L G+ +H I K + D
Sbjct: 86 QKGLLLYRDMRRRGIAADPLSSSFAVKSCIRFLYLPGGVQVHCNIFKDGHQWDT------ 139
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV-------------------------- 101
+ LTA++ + ++C +G A + F EM R
Sbjct: 140 ---LLLTAVMDLYSLCQRGGDACKVFDEMPHRDTVAWNVMISCCIRNNRTRDALSLFDVM 196
Query: 102 -------KPDAITFVGVLVACSHAGLVD--ERISHFNLMSEKYGIRPSIEHYGCLVYILG 152
+PD +T + +L AC+H ++ ERI H +M Y R ++ L+ +
Sbjct: 197 QGSSYKCEPDDVTCLLLLQACAHLNALEFGERI-HGYIMERGY--RDALNLCNSLISMYS 253
Query: 153 RAGRIAKAEELIKNM 167
R G + KA E+ K M
Sbjct: 254 RCGCLDKAYEVFKGM 268
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 158/398 (39%), Positives = 222/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+E+ E+ + LFR + G+ + T+ S LL C+ L AL++G +H + K + D
Sbjct: 172 YIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDD 231
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
G +L +DV+T A+I A G+G KAL F EM
Sbjct: 232 TTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIE 291
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+G+KPD ITFV VL+AC+HAG D + +F+ M++ YG+ +HY C+V +LGRAG++
Sbjct: 292 KGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLV 351
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI+ MP V G LLGACRIH N E AE A+Q+LL L P + YV L+N Y+
Sbjct: 352 EAVDLIEKMPFKPHAAVFGTLLGACRIHKNTEMAEFASQKLLNLDPASATGYVQLANVYA 411
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
++++W V R+R+ M + K PG IEV + H+F
Sbjct: 412 ATKRWDHVARVRKSMKSCKVVKTPGYSWIEVKSMAHQFRSGDKFHPELASIHGKLKELEK 471
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VP+ L D+ EE+KE L H+EKLAI +GL+ PG IR+ KNLRVC D
Sbjct: 472 KMKLAGYVPDLEFALHDVGEEQKEQLLLWHSEKLAIAYGLIKLPPGTPIRVFKNLRVCGD 531
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A IS++ RE +V D RFHHFK+G CSC D+W
Sbjct: 532 CHRAIKYISQIERREIIVRDTTRFHHFKDGHCSCADYW 569
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 160/398 (40%), Positives = 222/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE-- 58
Y + + EEA+ LF +++ G+ D++ + S+L AC L ++ G +H ++K +E
Sbjct: 117 YSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESS 176
Query: 59 --VDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
VD L M +DV++ TALIV A G+G +L+++ +M
Sbjct: 177 LSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIA 236
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G KPD ITF+G+L ACSH GL+ ++F M + YGI+P EHY C++ +LGR+G++A
Sbjct: 237 TGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLA 296
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A+ L+ M +A D V LL ACR+H LE E AA+ L EL P N YV+LSN YS
Sbjct: 297 EAKGLLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYS 356
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ KW+ RIR LM R I K PG IE + V F+
Sbjct: 357 AAGKWEDAARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIM 416
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+VP+ S L D D+E KE L H+EKLA+ FGL++ G IRI KNLRVC D
Sbjct: 417 LIKEAGYVPDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGD 476
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA SKVY R ++ D N FHHF G CSC D+W
Sbjct: 477 CHTAMKYTSKVYARHIILRDSNCFHHFTEGRCSCGDYW 514
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 27/185 (14%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE--------- 58
E+AL F++++ + + D+ T+ S+L + + ++ + +H I+K E
Sbjct: 23 EDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLIIKTGFEAYKLVNNAL 82
Query: 59 -------------VDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+ V M KDV++ T+L+ + G +A++ F +M+I GV PD
Sbjct: 83 IDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQ 142
Query: 106 ITFVGVLVACSHAGLVD--ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
I VL AC+ ++D ++I H L+ K G+ S+ LV + + G I A
Sbjct: 143 IAVASVLSACAELTVMDFGQQI-HATLV--KSGLESSLSVDNSLVTMYAKCGSIVDANRA 199
Query: 164 IKNMP 168
NMP
Sbjct: 200 FDNMP 204
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 232/399 (58%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL FRE+ +G+ + +++S+L C L L+ G +H +++ + ++D
Sbjct: 308 YEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMD 367
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V AL KD++ ++I A G G +AL F++M++
Sbjct: 368 VFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRL 427
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD IT++G L ACS+ G V E FN M+ IRP EHY C+V +LGR+G +
Sbjct: 428 AGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVE 487
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LIKNMP+ D + G L+GACR+H N E AE AA++LLEL P N G YV+LS+ Y+
Sbjct: 488 EAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYT 547
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
S +W+ ++R+ ++ RN+ K PGC IE D VH F
Sbjct: 548 SVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLD 607
Query: 257 ---VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+++G+ + S VL D+DEE+K +L H+E+ A+ +GL+ G+ IR++KNLRVC
Sbjct: 608 GLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCG 667
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+A +I+K+ +RE ++ D NRFHHFK+G CSC+D+W
Sbjct: 668 DCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 232/399 (58%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL FRE+ +G+ + +++S+L C L L+ G +H +++ + ++D
Sbjct: 308 YEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMD 367
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V AL KD++ ++I A G G +AL F++M++
Sbjct: 368 VFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRL 427
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD IT++G L ACS+ G V E FN M+ IRP EHY C+V +LGR+G +
Sbjct: 428 AGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVE 487
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LIKNMP+ D + G L+GACR+H N E AE AA++LLEL P N G YV+LS+ Y+
Sbjct: 488 EAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYT 547
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
S +W+ ++R+ ++ RN+ K PGC IE D VH F
Sbjct: 548 SVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLD 607
Query: 257 ---VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+++G+ + S VL D+DEE+K +L H+E+ A+ +GL+ G+ IR++KNLRVC
Sbjct: 608 GLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCG 667
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+A +I+K+ +RE ++ D NRFHHFK+G CSC+D+W
Sbjct: 668 DCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706
>gi|356496056|ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 157/391 (40%), Positives = 231/391 (59%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGL-TGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV------ 61
E L+L ++ +G ++ +VS L ACTHLG+ +G +H +++ E++V
Sbjct: 215 ECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTSL 274
Query: 62 ------------GL----GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
GL MA K+ + T +I LA+ G+G +A+ F +M G+ PD
Sbjct: 275 IDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREAVRVFSDMLEEGLTPDD 334
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+ +VGVL ACSHAGLV+E + FN M ++ I+P+I+HYGC+V ++GRAG + +A +LIK
Sbjct: 335 VVYVGVLSACSHAGLVNEGLQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIK 394
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MP+ + V LL AC++H NLE E AA+ + L N G Y++L+N Y+ ++KW
Sbjct: 395 SMPIKPNDVVWRSLLSACKVHHNLEIGEIAAENIFRLNKHNPGDYLVLANMYARAKKWAN 454
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GF 261
V RIR MAE+++ + PG L+E + V++FV G+
Sbjct: 455 VARIRTEMAEKHLVQTPGFSLVEANRNVYKFVSQDKSQPICETIYDMIQQMEWQLKFEGY 514
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P+ S+VL D+DE+EK L H++KLAI F L+ G IRI +NLR+CNDCHT T
Sbjct: 515 TPDMSQVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSPIRISRNLRMCNDCHTYTKF 574
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS +Y RE V DRNRFHHFK+G+CSCKD+W
Sbjct: 575 ISVIYEREITVRDRNRFHHFKDGTCSCKDYW 605
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEALLL+ E+ +G+ D T +L AC+ L AL+ G+ +H ++ K +EV
Sbjct: 113 EEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFKAGLEV-------- 164
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV 101
DV LI + CG A F +M + V
Sbjct: 165 -DVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSV 197
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 161/401 (40%), Positives = 233/401 (58%), Gaps = 49/401 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ EAL F ++ G ++ T+VS L AC++L AL+ G W+H YI K I+++
Sbjct: 222 YVQVGCFMEALDFFHKMLQIGPKPNEYTLVSALAACSNLVALDQGKWIHAYIGKGEIKMN 281
Query: 61 VGLGMALKD-----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQ 97
L ++ D V A+I AM G N+A+ F +M+
Sbjct: 282 ERLLASIIDMYAKCGEIESASRVFFEHKVKQKVWLWNAMIGGFAMHGMPNEAINVFEQMK 341
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+ + P+ +TF+ +L ACSH +V+E +F LM Y I P IEHYGC+V +L R+G +
Sbjct: 342 VEKISPNKVTFIALLNACSHGYMVEEGKLYFRLMVSDYAITPEIEHYGCMVDLLSRSGLL 401
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+AE++I +MPMA D + G LL ACRI+ ++E R + + + P++ G +V+LSN Y
Sbjct: 402 KEAEDMISSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKGMDPNHIGCHVLLSNIY 461
Query: 218 SSSRKWKKVKRIRELMA-ERNIKKPPGCILIEVDGVVHEFV------------------- 257
S+S +W + + +RE R+ KK PGC IE+ G H+F+
Sbjct: 462 STSGRWNEARILREKNEISRDRKKIPGCSSIELKGTFHQFLVGDQSHPQSREIYSFLDEM 521
Query: 258 -----KAGFVPNKSEVLFDM-DEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
AG+VP E+L D+ DEE+KETAL++H+EKLAI FGL++ G IRI+KNLRV
Sbjct: 522 TTKLKSAGYVPELGELLHDIDDEEDKETALSVHSEKLAIAFGLMNTANGTPIRIVKNLRV 581
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH AT ISKVYNR +V DR R+HHF++G CSCKD+W
Sbjct: 582 CGDCHQATKFISKVYNRVIIVRDRTRYHHFEDGICSCKDYW 622
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 64 GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE 123
GM +DV++ + +I G +AL++F++M G KP+ T V L ACS+ +D+
Sbjct: 206 GMRERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSALAACSNLVALDQ 265
>gi|356529748|ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 604
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 154/391 (39%), Positives = 229/391 (58%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGL-TGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL---- 63
E L+L ++ +G ++ +VS L ACTHLG+ G +H +++ E++V +
Sbjct: 214 ECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNFGRCIHGILLRNISELNVAVKTSL 273
Query: 64 ------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
MA K+ + T +I LA+ G+G +AL F +M G+ PD
Sbjct: 274 IDMYVKSGSLEKGLCVFQNMAQKNRYSYTVIITGLAIHGRGREALSVFSDMLEEGLAPDD 333
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+ +VGVL ACSHAGLV+E + FN + ++ I+P+I+HYGC+V ++GRAG + A +LIK
Sbjct: 334 VVYVGVLSACSHAGLVNEGLQCFNRLQFEHKIKPTIQHYGCMVDLMGRAGMLKGAYDLIK 393
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MP+ + V LL AC++H NLE E AA+ + +L N G Y++L+N Y+ ++KW
Sbjct: 394 SMPIKPNDVVWRSLLSACKVHHNLEIGEIAAENIFKLNQHNPGDYLVLANMYARAKKWAD 453
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GF 261
V RIR MAE+++ + PG L+E + V++FV G+
Sbjct: 454 VARIRTEMAEKHLVQTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQQMEWQLKFEGY 513
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P+ S+VL D+DE+EK L H++KLAI F L+ G IRI +N+R+CNDCHT T
Sbjct: 514 TPDMSQVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSRIRISRNIRMCNDCHTYTKF 573
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS +Y RE V DRNRFHHFK+G+CSCKD+W
Sbjct: 574 ISVIYEREITVRDRNRFHHFKDGTCSCKDYW 604
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEALLL+ E+ +G+ D T +L AC+ LGAL+ G+ +H ++ K +E
Sbjct: 112 EEALLLYVEMLERGIEPDNFTYPFVLKACSLLGALKEGVQIHAHVFKAGLE--------- 162
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV 101
DV LI + CG A F +M + V
Sbjct: 163 GDVFVQNGLINMYGKCGAIEHASVVFEQMDEKSV 196
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 158/398 (39%), Positives = 220/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YVE+ E+ L +F+ + + + +++ S+LL C++L AL +G +H + K + D
Sbjct: 270 YVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKD 329
Query: 61 VG----------------------LGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L M KDV++ A+I A G G KAL F +M+
Sbjct: 330 TTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRN 389
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+KPD ITFV V++AC+HAG VD + +F M +++GI HY C++ +LGRAGR+
Sbjct: 390 GTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLD 449
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A LIK MP + G LLGACRIH NL+ AE AA+ LL L P + YV L+N Y+
Sbjct: 450 EAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYA 509
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
++ KW +V ++R++M E N+ K PG IE+ V HEF
Sbjct: 510 ATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDG 569
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VP+ L D++EE KE L H+EKLAI FGL+ PG IR+ KNLRVC D
Sbjct: 570 KMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGD 629
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A IS + RE +V D RFHHF+NG CSC D+W
Sbjct: 630 CHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 159/398 (39%), Positives = 217/398 (54%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV- 59
YV +S EA+ LF +++ G+ D VT+ SLL AC L AL +G LH YI K N+
Sbjct: 281 YVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPN 340
Query: 60 ---------------------DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
DV M L+DV++ T+++ GQG A+ F +M
Sbjct: 341 LLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLD 400
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G PD+I FV VL ACSH GL+D+ +F +M+E+YGI P IEH+ C+V + GRAG +
Sbjct: 401 SGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVE 460
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A IK MPM + V G LL ACR+H ++ AA L +L P G YV+LSN Y+
Sbjct: 461 EAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYA 520
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ WK V +R M + IKK PG +E++G VH F+
Sbjct: 521 KAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVG 580
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G++P L D++ E+KE L +H+EKLAI F +++ G IRI KNLRVC D
Sbjct: 581 KMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGD 640
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A +ISK+ +R +V D NRFHHF NG CSC D+W
Sbjct: 641 CHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 93/236 (39%), Gaps = 38/236 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV ++ EAL +F+ + D T +L AC+ L L VG+ +H I+K ++ +
Sbjct: 112 YVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTN 171
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL +DV++ +++ A GQ + ALE EM
Sbjct: 172 LFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDS 231
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ DA T + + L E + + + M E+ + ++ + ++ I
Sbjct: 232 LNLNHDAGTMASLSPVVCYTSL--ENVQYIHNMFERM-TKKNLISWNVMIAIYVNNSMPN 288
Query: 159 KAEELIKNMP---MALDHFVLGGLLGAC----------RIHDNLEAAERAAQQLLE 201
+A L M M D + LL AC R+H +E LLE
Sbjct: 289 EAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLE 344
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 160/375 (42%), Positives = 213/375 (56%), Gaps = 47/375 (12%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----------------- 67
++ +V +L AC HLGAL+ G W+H YI K I + AL
Sbjct: 310 NEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVF 369
Query: 68 -----KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
+DV++ T++I L+ G G AL FY+M V P+ IT +GVL CSH+GLV+
Sbjct: 370 NGICKRDVLSFTSMISGLSYHGLGKDALRVFYQMLDENVMPNEITILGVLNGCSHSGLVE 429
Query: 123 ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGA 182
E S M +GI P IEHYGC + +LGRAG + +A E++K MPM D + LL A
Sbjct: 430 EGSSILANMESLWGIAPKIEHYGCYIDLLGRAGYLERALEVVKTMPMEPDIVIWRALLSA 489
Query: 183 CRIHDNLEAAERAAQQLLEL-LPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKP 241
RIH N+ E+ + +L D+ G V+LSN Y+S +W++V +R+LM +R +
Sbjct: 490 SRIHHNVNLGEQIISHIGQLKSSDHNGGEVLLSNLYASLGRWERVTEMRKLMVDRRSESS 549
Query: 242 PGCILIEVDGVVHEFVKA------------------------GFVPNKSEVLFDMDEEEK 277
PGC IEV+G+VHEF A G+ N +V FD++EEEK
Sbjct: 550 PGCSWIEVNGLVHEFRVADQLHPQIVEIRNKLNEILKRLSQIGYSANTMQVSFDLNEEEK 609
Query: 278 ETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNR 337
E A+ H+EKLAI FGL+S PG LIRI+KNLR C DCH+A IS+VY RE VV DR+R
Sbjct: 610 EQAVAWHSEKLAIAFGLMSTEPGTLIRIVKNLRTCEDCHSALKTISQVYGREIVVRDRSR 669
Query: 338 FHHFKNGSCSCKDFW 352
FH F G CSCKDFW
Sbjct: 670 FHTFIEGDCSCKDFW 684
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 80/197 (40%), Gaps = 55/197 (27%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG-------------------- 64
D+ T ++ +C+H +L G +H ++K E ++ +G
Sbjct: 177 DEYTFTFVITSCSHQISLIYGEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVF 236
Query: 65 --MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR---------------GVKPDAIT 107
M+ +DV + T+L+ A G+ ++A E F M +R G P+A+T
Sbjct: 237 NQMSERDVFSWTSLLGGYAKHGEMDRACELFNMMPVRNDVSWAVMISGFLGCGRYPEALT 296
Query: 108 F-----------------VGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYI 150
F V VL AC+H G +D+ + +L +K GIR S L+ +
Sbjct: 297 FFCNMLCDDRVNPNEAVLVCVLSACAHLGALDQG-NWIHLYIDKIGIRQSSNISTALIDM 355
Query: 151 LGRAGRIAKAEELIKNM 167
+ GRI A + +
Sbjct: 356 YAKCGRIDCASRVFNGI 372
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 155/397 (39%), Positives = 222/397 (55%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
VE+ E AL + ++ + D+ T +L+ AC+ L ALE G +H +K N D
Sbjct: 1186 VENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDP 1245
Query: 62 GLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ +L D + + A+IV LA G +AL++F EM+ R
Sbjct: 1246 FVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSR 1305
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
GV PD +TF+GVL ACSH+GLV E +F M + YGI P IEHY CLV L RAGRI +
Sbjct: 1306 GVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIRE 1365
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
AE++I +MP + LL ACR+ + E +R A++LL L P + +YV+LSN Y++
Sbjct: 1366 AEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAA 1425
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
+ +W+ V R +M + N+KK PG +++ VH FV
Sbjct: 1426 ANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKR 1485
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+ G++P+ L D++EE+KE +L H+EKLAI +GL+ P +R+IKNLRVC DC
Sbjct: 1486 IREEGYLPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDC 1545
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H A ISKV+ RE V+ D NRFHHF++G CSC D+W
Sbjct: 1546 HNAIKYISKVFEREVVLRDANRFHHFRSGVCSCGDYW 1582
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 25/188 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ +AL L+ +Q G +++T+ + A L L+ G + ++K+ +D
Sbjct: 1084 YIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLD 1143
Query: 61 VG-----LGMALK-----------------DVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L M LK D + T +I GQ AL ++ M++
Sbjct: 1144 LFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRL 1203
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V+PD TF ++ ACS +++ R H N + P + LV + + G I
Sbjct: 1204 SKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFV--MTSLVDMYAKCGNI 1261
Query: 158 AKAEELIK 165
A L K
Sbjct: 1262 EDARGLFK 1269
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 115/292 (39%), Gaps = 46/292 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+++ EA+ F ++ + + D +T V +L L LE+G +H +++ ++
Sbjct: 881 FLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQV 940
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G M D+++ +I A+ G ++ F ++
Sbjct: 941 VSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLR 1000
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD T VL ACS G + + + K G+ L+ + ++G++
Sbjct: 1001 GGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKME 1060
Query: 159 KAEELIKNM---------PMALDHFVLGGLLGACRIHDNL-EAAERAAQQLLELLPDNGG 208
+AE L N M + V G A R++ + E+ ERA Q L G
Sbjct: 1061 EAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAG 1120
Query: 209 SYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAG 260
V L K+ K+I+ ++ +R L + GV+ ++K G
Sbjct: 1121 GLVGL----------KQGKQIQAVVVKRGFN----LDLFVISGVLDMYLKCG 1158
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 156/397 (39%), Positives = 226/397 (56%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
++ + +EAL LFR + H G+ VT SL+ AC +L +L +G LH Y+++ + +V
Sbjct: 250 AQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNV 309
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ +L D+++ TA+I+ A+ G +AL F M++
Sbjct: 310 FISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELG 369
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
+KP+ ITF+ VL ACSHAGLVD+ +FN MS+ YGI PS+EH+ L LGR G++ +
Sbjct: 370 NLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEE 429
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A I M + V LL AC++H N AE A+++ +L P + GS++ILSN YSS
Sbjct: 430 AYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSS 489
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF----------------------- 256
S +W + +R+ M ++ ++K P C IEV H F
Sbjct: 490 SGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQ 549
Query: 257 -VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
V+ G+VPN +V D++EE+K + L H+EKLAI FG++S PG IR++KNLRVC DC
Sbjct: 550 MVRQGYVPNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDC 609
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
HT T ISK+ RE V+ D NRFHHFK+G CSC DFW
Sbjct: 610 HTVTKFISKIVGREIVMRDANRFHHFKDGICSCGDFW 646
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EAL L RE+ G D T+ S+L + GM LH + + DV +G
Sbjct: 156 EALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVG---- 211
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHF 128
++LI + A C + + +++ F + +R DAI + +L C+ G VDE + F
Sbjct: 212 -----SSLIDMYANCTRTDYSVKVFDNLPVR----DAILWNSMLAGCAQNGSVDEALGLF 262
Query: 129 NLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
M GI+P + L+ G + ++L
Sbjct: 263 RRMLHS-GIKPMPVTFSSLIPACGNLASLLLGKQL 296
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 227/406 (55%), Gaps = 54/406 (13%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTH-LGALEVGMWLHPYIMKKNIE 58
Y + E+AL+LF E ++ GL + TM S++ AC H L A+ G +H Y ++ +
Sbjct: 291 YARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLA 350
Query: 59 VDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM 96
D+ +G AL K+V+T LI+ M G+G +ALE F M
Sbjct: 351 SDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNM 410
Query: 97 QI---RG--VKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYIL 151
RG KP+ +TF+ V ACSH+GL+ E ++ F M +G+ P+ +HY C+V +L
Sbjct: 411 VAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLL 470
Query: 152 GRAGRIAKAEELIKNMPMALDHF-VLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSY 210
GRAG++ +A EL+ MP D LLGACRIH N+E E AA+ LL L P+ Y
Sbjct: 471 GRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHY 530
Query: 211 VILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------- 257
V+LSN YSS+ W K +R+ M + +KK PGC IE VH+F+
Sbjct: 531 VLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLH 590
Query: 258 -----------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRII 306
K G+VP+ S VL ++DE+EKE L H+EKLAI FG+++ PG IR+
Sbjct: 591 GFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVA 650
Query: 307 KNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
KNLRVCNDCH AT ISK+ RE +V D RFHHFK G+CSC D+W
Sbjct: 651 KNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 24/134 (17%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL-GMAL 67
EAL FR + +G+ D VT+ S+L AC+HL L+VG +H Y+++ N ++ G AL
Sbjct: 197 EALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSAL 256
Query: 68 KD----------------------VMTLTALIVVLAMCGQGNKALEYFYEM-QIRGVKPD 104
D + A+I A G KAL F EM ++ G+ P+
Sbjct: 257 VDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPN 316
Query: 105 AITFVGVLVACSHA 118
T V+ AC H+
Sbjct: 317 TTTMASVMPACVHS 330
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 156/391 (39%), Positives = 220/391 (56%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E A+ LF E+ KGL D + SLL AC L A E G +H +++K+ D G AL
Sbjct: 487 EGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNAL 546
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+ V++ +A+I LA G G +ALE F M G+ P+
Sbjct: 547 VYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNH 606
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
IT VL AC+HAGLVDE +FN M E +GI + EHY C++ +LGRAG++ A EL+
Sbjct: 607 ITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVN 666
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MP + V G LLGA R+H + E + AA++L L P+ G++V+L+N Y+SS W +
Sbjct: 667 SMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNE 726
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
V ++R+LM + NIKK P +EV VH F+ KAG+
Sbjct: 727 VAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGY 786
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
+PN L D+D EKE L+ H+E+LA+ F L+S PG IR+ KNLR+C DCH A
Sbjct: 787 IPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKF 846
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS + +RE ++ D NRFHHF++G+CSC D+W
Sbjct: 847 ISNIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ C +A+ +F E+ G+ + ++ ACT ++ G +H +++ E D
Sbjct: 177 YVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKD 236
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V AL DV++ ALI + G ++A+E +M+
Sbjct: 237 VFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKS 296
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
G+ P+ +L AC+ AG D
Sbjct: 297 SGLVPNVFMLSSILKACAGAGAFD 320
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 19/129 (14%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKD 69
A+ L +++ GL + + S+L AC GA ++G +H +++K N + D +G+ L D
Sbjct: 287 AIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVD 346
Query: 70 VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFN 129
+ + + A++ F M R D I + ++ CSH G DE S F
Sbjct: 347 MYAKNHFL---------DDAMKVFDWMSHR----DLILWNALISGCSHGGRHDEAFSIF- 392
Query: 130 LMSEKYGIR 138
YG+R
Sbjct: 393 -----YGLR 396
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 77/184 (41%), Gaps = 25/184 (13%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVG----- 62
+EA +F ++ +GL ++ T+ ++L + L A +H K D
Sbjct: 386 DEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGL 445
Query: 63 ---------LGMALK--------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
L A++ D++ +T++I L+ C G A++ F EM +G++PD
Sbjct: 446 IDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 505
Query: 106 ITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+L AC+ ++ + H +L+ ++ LVY + G I AE
Sbjct: 506 FVLSSLLNACASLSAYEQGKQVHAHLIKRQF--MSDAFAGNALVYTYAKCGSIEDAELAF 563
Query: 165 KNMP 168
++P
Sbjct: 564 SSLP 567
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 156/391 (39%), Positives = 220/391 (56%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E A+ LF E+ KGL D + SLL AC L A E G +H +++K+ D G AL
Sbjct: 394 EGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNAL 453
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+ V++ +A+I LA G G +ALE F M G+ P+
Sbjct: 454 VYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNH 513
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
IT VL AC+HAGLVDE +FN M E +GI + EHY C++ +LGRAG++ A EL+
Sbjct: 514 ITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVN 573
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MP + V G LLGA R+H + E + AA++L L P+ G++V+L+N Y+SS W +
Sbjct: 574 SMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNE 633
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
V ++R+LM + NIKK P +EV VH F+ KAG+
Sbjct: 634 VAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGY 693
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
+PN L D+D EKE L+ H+E+LA+ F L+S PG IR+ KNLR+C DCH A
Sbjct: 694 IPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKF 753
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS + +RE ++ D NRFHHF++G+CSC D+W
Sbjct: 754 ISNIVSREIIIRDINRFHHFRDGTCSCGDYW 784
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ C +A+ +F E+ G+ + ++ ACT ++ G +H +++ E D
Sbjct: 84 YVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKD 143
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V AL DV++ ALI + G ++A+E +M+
Sbjct: 144 VFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKS 203
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
G+ P+ +L AC+ AG D
Sbjct: 204 SGLVPNVFMLSSILKACAGAGAFD 227
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 19/129 (14%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKD 69
A+ L +++ GL + + S+L AC GA ++G +H +++K N + D +G+ L D
Sbjct: 194 AIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVD 253
Query: 70 VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFN 129
+ + + A++ F M R D I + ++ CSH G DE S F
Sbjct: 254 MYAKNHFL---------DDAMKVFDWMSHR----DLILWNALISGCSHGGRHDEAFSIF- 299
Query: 130 LMSEKYGIR 138
YG+R
Sbjct: 300 -----YGLR 303
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 75/184 (40%), Gaps = 25/184 (13%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+EA +F ++ +GL ++ T+ ++L + L A +H K D + L
Sbjct: 293 DEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGL 352
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D++ +T++I L+ C G A++ F EM +G++PD
Sbjct: 353 IDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 412
Query: 106 ITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+L AC+ ++ + H +L+ ++ LVY + G I AE
Sbjct: 413 FVLSSLLNACASLSAYEQGKQVHAHLIKRQF--MSDAFAGNALVYTYAKCGSIEDAELAF 470
Query: 165 KNMP 168
++P
Sbjct: 471 SSLP 474
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 160/399 (40%), Positives = 233/399 (58%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +AL LF + + ++ + T++ + A + + +L G W+H YI+K + D
Sbjct: 283 YERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTD 342
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG L K + T++IV L M G + LE F EM
Sbjct: 343 GVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCR 402
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KP AITF+GVL ACSHAG ++ +F +M+ YGI+PSIEHYGCL+ +L RAG +
Sbjct: 403 TGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLE 462
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A++ I+ MP+ + + LL R H N+ E AAQ L++L PD G YVILSN Y+
Sbjct: 463 EAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYA 522
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ W+KV+++RE+M ++ +KK PGC IE G +HEF+
Sbjct: 523 AAGLWEKVRQVREMMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKK 582
Query: 258 ---KAGFVPNKSEVLFDMDEE-EKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
AG +P+ ++VL ++E+ EKE L H+E+LAI FGL++ G IRIIKNLR+CN
Sbjct: 583 KLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICN 642
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH T ++S +YNRE ++ D +RFHHFK+GSCSCKDFW
Sbjct: 643 DCHAVTKLLSHIYNREIIIRDGSRFHHFKSGSCSCKDFW 681
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+E+ +A+ LF ++ D T+ +L C LGAL+ G +H ++K VD
Sbjct: 90 YIENQRSNDAIALFCKLLCD-FVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVD 148
Query: 61 ----------------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V M KDV++ +LI A CG+ ALE F EM
Sbjct: 149 KFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMP- 207
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ D+ ++ ++ S +G ++ F+ M IR S+ + ++ +AG
Sbjct: 208 ---EKDSFSWTILIDGLSKSGKLEAARDVFDRMP----IRNSVS-WNAMINGYMKAGDSN 259
Query: 159 KAEELIKNMP 168
A+EL MP
Sbjct: 260 TAKELFDQMP 269
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 160/398 (40%), Positives = 220/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y ++ EEA LLF E+ G+ T SLL +GA+ G +H ++K
Sbjct: 100 YAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSN 159
Query: 56 ---------------NIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
NIE V M ++V++ T++I A G +ALE F++M
Sbjct: 160 QCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLE 219
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G KP+ IT+V VL ACSH G++ E HFN M +++GI P +EHY C+V +LGR+G +
Sbjct: 220 TGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLV 279
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E I +MP+ D V LLGACR+H N E AA+ +LE PD+ +Y++LSN ++
Sbjct: 280 EAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHA 339
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
S+ +WK V +IR+ M ERN+ K GC IEV+ VH F
Sbjct: 340 SAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLAS 399
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G++P+ VL D++EE+KE L H+EK+A+ FGL+S IRI KNLRVC D
Sbjct: 400 KIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGD 459
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA IS RE VV D NRFHH KNG CSC D+W
Sbjct: 460 CHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 497
>gi|115446651|ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|46389885|dbj|BAD15486.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|125582482|gb|EAZ23413.1| hypothetical protein OsJ_07107 [Oryza sativa Japonica Group]
gi|215712305|dbj|BAG94432.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 586
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 155/394 (39%), Positives = 230/394 (58%), Gaps = 51/394 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI-------MKKNIEVDV 61
EAL +F + + D V +VS+L AC HLGA+E G W+H Y+ + N+ ++
Sbjct: 194 EALWVFDRMMREEFRPDVVVLVSVLKACAHLGAVERGRWVHRYLETGSFGGRRGNLMLET 253
Query: 62 GL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
L G+ +DV+ A+I LAM G G +ALE F M +G P
Sbjct: 254 ALVDMYCKCGCMEDAWQVFDGVHRRDVVLWNAMIGGLAMNGYGERALELFRRMLQKGFMP 313
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
+ TF+ VL AC+H G VDE F M + YGI+P EHYGCL +LGRAG + +AE L
Sbjct: 314 NESTFIAVLCACTHTGRVDEGKRVFKSMQD-YGIKPQREHYGCLADLLGRAGNVEEAEAL 372
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
+ +MPM G L+ +C++H+++ ER ++L+EL P +GG YV+L N Y+ + +W
Sbjct: 373 LLDMPMEPHASQWGALMSSCQMHNDINVGERVGKRLIELEPYDGGRYVVLFNLYAVNGRW 432
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------ 259
++ + IR++M +R KK G IE++G+VHEF+
Sbjct: 433 EEARTIRQMMEDRGAKKETGLSFIELNGLVHEFISGDTRHPLTRKIYALLEDIERRLQLI 492
Query: 260 GFVPNKSEVLFDM-DEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTA 318
G+V + S+V+ DM DEE+K AL+ H+E+LA+ FG+++ GV IRI+KNLRVC DCH
Sbjct: 493 GYVKDTSQVIMDMDDEEDKGIALSYHSERLALAFGILNIPQGVPIRIVKNLRVCRDCHVH 552
Query: 319 TNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ ++SK+Y RE +V DR+RFH F++G CSC D+W
Sbjct: 553 SKLVSKLYEREIIVRDRHRFHVFRDGVCSCNDYW 586
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/398 (37%), Positives = 216/398 (54%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + E+AL FR++Q +G+ ++ T+ L C+ L +LE G LH + K D
Sbjct: 592 YAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSD 651
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL +D + +I A GQGNKAL F M
Sbjct: 652 MFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLD 711
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD +TF G+L ACSH GLV+E HFN M +GI P+++H C+V ILGR G+
Sbjct: 712 EGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFD 771
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+ E+ I+ M ++ + + +LGA ++H+NL E+AA +L EL P+ SY++LSN ++
Sbjct: 772 ELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFA 831
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAG------------------ 260
+ +W VKR+R LM+ + +KK PGC +E +G VH FV
Sbjct: 832 TEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDR 891
Query: 261 ------FVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+VP VL ++ E EK+ L H+E+LA+ F L+S IRI KNLR+C D
Sbjct: 892 ELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRD 951
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH IS + N+E VV D RFHHFKNG+CSC DFW
Sbjct: 952 CHDVMKHISSITNQEIVVRDVRRFHHFKNGACSCNDFW 989
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 22/131 (16%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE--------- 58
+ L +F + +G + T +S+L +C+ L + G +H +I+K ++
Sbjct: 498 DRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTAL 557
Query: 59 ------------VDVGLG-MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
DV ++++D+ T T +I A QG KAL YF +MQ GVKP+
Sbjct: 558 IDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNE 617
Query: 106 ITFVGVLVACS 116
T G L CS
Sbjct: 618 FTLAGCLSGCS 628
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 22/131 (16%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EE++ LF ++ ++ T+ SLL A T+ G L+ G +H + K E DV + AL
Sbjct: 397 EESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNAL 456
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+D+++ A + L CG ++ L FY M G P+
Sbjct: 457 VTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNM 516
Query: 106 ITFVGVLVACS 116
TF+ +L +CS
Sbjct: 517 YTFISILGSCS 527
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 65/164 (39%), Gaps = 23/164 (14%)
Query: 31 SLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----------------------K 68
S+L C +L V +H I+K I D L ++L +
Sbjct: 117 SMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDR 176
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHF 128
DV++ TALI L G N ++ F EMQ G+ P+ T L ACS +D
Sbjct: 177 DVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLG-KQM 235
Query: 129 NLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALD 172
+ + K G+ + LV + + G I A ++ MP D
Sbjct: 236 HAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQND 279
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V + +++ LF+E+Q++G+ ++ T+ + L AC+ AL++G +H K + +D+
Sbjct: 189 VAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDL 248
Query: 62 GLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+G AL D+ +T L+ A G L+ F M
Sbjct: 249 FVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMEL 308
Query: 100 GVKPDAITFVGVLVACSHA 118
VK + T VL C+++
Sbjct: 309 DVKCNEFTLTTVLKGCANS 327
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 4/140 (2%)
Query: 31 SLLLACTHLGALEVGMWLHPYIMKKNIEVD-VGLGMALK--DVMTLTALIVVLAMCGQGN 87
SL++ C + G +G L K + +D +G+ +K D++ +ALI L GQ
Sbjct: 338 SLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSE 397
Query: 88 KALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCL 147
++++ F+ M++ P+ T +L A ++ G + S + KYG + L
Sbjct: 398 ESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQS-IHACVWKYGFETDVAVSNAL 456
Query: 148 VYILGRAGRIAKAEELIKNM 167
V + + G + +L ++M
Sbjct: 457 VTMYMKNGCVHDGTKLYESM 476
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 154/392 (39%), Positives = 224/392 (57%), Gaps = 48/392 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LF +Q +G+ T++S+L C L +L G +H +++ +VDV + L
Sbjct: 314 EALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLM 373
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG-VKPDA 105
KD++ ++I A G G +AL+ F EM + G KP+
Sbjct: 374 TMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNE 433
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TFV L ACS+AG+V+E + + M +G++P HY C+V +LGRAGR +A E+I
Sbjct: 434 VTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMID 493
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+M + D V G LLGACR H L+ AE A++L+E+ P+N G+Y++LSN Y+S +W
Sbjct: 494 SMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWAD 553
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------------AG 260
V +R+LM R ++K PGC EV+ VH F + AG
Sbjct: 554 VAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAG 613
Query: 261 FVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATN 320
+ P+ S L D+DEEEK +L H+E+LA+ + L+ G+ IR++KNLRVC+DCHTA
Sbjct: 614 YNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIK 673
Query: 321 IISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IISKV RE ++ D NRFHHF+NG CSCKD+W
Sbjct: 674 IISKVKEREIILRDANRFHHFRNGECSCKDYW 705
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 160/398 (40%), Positives = 220/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y ++ EEA LLF E+ G+ T SLL +GA+ G +H ++K
Sbjct: 237 YAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSN 296
Query: 56 ---------------NIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
NIE V M ++V++ T++I A G +ALE F++M
Sbjct: 297 QCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLE 356
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G KP+ IT+V VL ACSH G++ E HFN M +++GI P +EHY C+V +LGR+G +
Sbjct: 357 TGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLV 416
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E I +MP+ D V LLGACR+H N E AA+ +LE PD+ +Y++LSN ++
Sbjct: 417 EAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHA 476
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
S+ +WK V +IR+ M ERN+ K GC IEV+ VH F
Sbjct: 477 SAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLAS 536
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G++P+ VL D++EE+KE L H+EK+A+ FGL+S IRI KNLRVC D
Sbjct: 537 KIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGD 596
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA IS RE VV D NRFHH KNG CSC D+W
Sbjct: 597 CHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 634
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 35/184 (19%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
+A+ LF +++ G D+ T S+L ACT LG L +G LH +++ + +DV +G +L
Sbjct: 39 DAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLV 98
Query: 69 D-------------------------VMTLTALIVVLAMCGQGNK-ALEYFYEMQIRGVK 102
D VM+ TA+I A G+ +K A+E F +M ++
Sbjct: 99 DMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIR 158
Query: 103 PDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGC----LVYILGRAGRIA 158
P+ +F VL AC G + + + + S Y ++ I C L+ + R+GR+
Sbjct: 159 PNHFSFSSVLKAC---GNLSDPYTGEQVYS--YAVKLGIASVNCVGNSLISMYARSGRME 213
Query: 159 KAEE 162
A +
Sbjct: 214 DARK 217
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLV 121
M ++++T T +I A G A++ F +M++ G PD T+ VL AC+ GL+
Sbjct: 16 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLL 72
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/398 (39%), Positives = 216/398 (54%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+E+ E L LF+ + G + ++ S+LL C++L AL++G +H I K + +
Sbjct: 202 YIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWN 261
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ G +L KDV+T A+I A G G KAL F +M+
Sbjct: 262 ITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRD 321
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD ITFV VL AC+HAG VD I +FN M YG+ +HY C+V +LGR G++
Sbjct: 322 EGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLV 381
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LIK MP + G LLGACRIH NLE AE AA+ LL L P++ YV L+N Y+
Sbjct: 382 EAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYA 441
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
+ +W V +R M + + K PG IEV VVHEF
Sbjct: 442 AMNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHEKLNELER 501
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VP+ L D+ EE+K+ L H+EKLAI +GL+ G IR+ KNLRVC D
Sbjct: 502 KMRLAGYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFKNLRVCGD 561
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+AT IS + R +V D RFHHF+ G CSC D+W
Sbjct: 562 CHSATKYISAIEGRVIIVRDTTRFHHFRQGECSCGDYW 599
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 218/398 (54%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ E+A+ LF+E+Q + + VT+ S+L AC LGAL +G W+H I +++ E +
Sbjct: 384 YAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESN 443
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL K+ +T A+I + G G++AL F EM
Sbjct: 444 IFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLH 503
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V P +TF+ VL ACSHAGLV E F M +G P EHY C+V +LGRAG +
Sbjct: 504 SRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLD 563
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
KA + I+ MP+ V G LLGAC IH + A A+ +L EL P N G YV+LSN YS
Sbjct: 564 KALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYS 623
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ + + + +R ++ R + K PGC LIEV +H F
Sbjct: 624 AGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTG 683
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AGF L D++EEEKE + +H+EKLAI FGL++ PG IRIIKNLRVC D
Sbjct: 684 KMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLITSEPGTEIRIIKNLRVCLD 743
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT ISK+ R VV D NRFHHFK+G CSC D+W
Sbjct: 744 CHNATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 781
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 77/190 (40%), Gaps = 23/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ E ++ LF+E+ G + ++V L+ G L + +H + K + +
Sbjct: 283 YTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSN 342
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL K + + A+I A G KA+ F EMQ
Sbjct: 343 SSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQK 402
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V+P+ +T +L AC+ G + +L++ + +I L+ + + G I
Sbjct: 403 CEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRE-SFESNIFVSTALIDMYAKCGSIT 461
Query: 159 KAEELIKNMP 168
+A+ L MP
Sbjct: 462 EAQRLFSMMP 471
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 160/398 (40%), Positives = 220/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y ++ EEA LLF E+ G+ T SLL +GA+ G +H ++K
Sbjct: 232 YAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSN 291
Query: 56 ---------------NIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
NIE V M ++V++ T++I A G +ALE F++M
Sbjct: 292 QCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLE 351
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G KP+ IT+V VL ACSH G++ E HFN M +++GI P +EHY C+V +LGR+G +
Sbjct: 352 TGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLV 411
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E I +MP+ D V LLGACR+H N E AA+ +LE PD+ +Y++LSN ++
Sbjct: 412 EAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHA 471
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
S+ +WK V +IR+ M ERN+ K GC IEV+ VH F
Sbjct: 472 SAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLAS 531
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G++P+ VL D++EE+KE L H+EK+A+ FGL+S IRI KNLRVC D
Sbjct: 532 KIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGD 591
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA IS RE VV D NRFHH KNG CSC D+W
Sbjct: 592 CHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 629
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 35/184 (19%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
+A+ LF +++ G D+ T S+L ACT LG L +G LH +++ + +DV +G +L
Sbjct: 34 DAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLV 93
Query: 69 D-------------------------VMTLTALIVVLAMCGQGNK-ALEYFYEMQIRGVK 102
D VM+ TA+I A G+ +K A+E F +M ++
Sbjct: 94 DMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIR 153
Query: 103 PDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGC----LVYILGRAGRIA 158
P+ +F VL AC G + + + + S Y ++ I C L+ + R+GR+
Sbjct: 154 PNHFSFSSVLKAC---GNLSDPYTGEQVYS--YAVKLGIASVNCVGNSLISMYARSGRME 208
Query: 159 KAEE 162
A +
Sbjct: 209 DARK 212
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLV 121
M ++++T T +I A G A++ F +M++ G PD T+ VL AC+ GL+
Sbjct: 11 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLL 67
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/382 (38%), Positives = 225/382 (58%), Gaps = 32/382 (8%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ E+ +F ++Q + DK T++SLL +C +GAL G+W++ YI K I +D
Sbjct: 475 YVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGID 534
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG AL K+V TA++ AM GQ +A++ + EM+
Sbjct: 535 AMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEE 594
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
RGVKPD +TF+ +L ACSH GLVDE +FN + Y I P+I HYGC+V +LGR G +
Sbjct: 595 RGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLE 654
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+ + I+ MP+ D + L+ ACR H N+E AE+A +QL+E+ P N G++V+LSN Y+
Sbjct: 655 ETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYA 714
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFDMDE---- 274
+ +W V ++R + E + K PG +IE +GVVHEFV + V +++L + +
Sbjct: 715 DAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEFVASNLV--SADILCMLQDIERR 772
Query: 275 ----EEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRET 330
+E + H+E+LA+ FGL++ IR++ ++R+C DCH+ +IS+ Y+RE
Sbjct: 773 LLVKQELSDTTSQHSERLAVAFGLINNQENSPIRVVNSVRMCRDCHSVMKLISQAYDREI 832
Query: 331 VVMDRNRFHHFKNGSCSCKDFW 352
V+ D RFH F +G CSCKD+W
Sbjct: 833 VIRDNYRFHRFTDGHCSCKDYW 854
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 13/134 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ E+L LF++++ + + D+V +V++L AC HL ++G +H +I+ + VD
Sbjct: 343 YVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVD 402
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
LG AL D + A CG+ ++AL F ++ + A ++ +L +G
Sbjct: 403 GFLGNALLD---------LYAKCGKLDEALRTFEQLPCKS----AASWNSMLDGFCRSGG 449
Query: 121 VDERISHFNLMSEK 134
VD+ FN + EK
Sbjct: 450 VDKARDFFNKIPEK 463
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 64/172 (37%), Gaps = 55/172 (31%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI--- 57
YV EAL LF E+ G+ D++TMVSL+ C L LE+G LH YI+ +
Sbjct: 209 YVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIR 268
Query: 58 ------------------------------EVDVGLGMAL-------------------- 67
EVDV L L
Sbjct: 269 GSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKM 328
Query: 68 --KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSH 117
+ +++ T ++ G ++LE F +M+ V PD + V VL AC H
Sbjct: 329 NERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVH 380
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
M +DV++ +I + G +AL+ F EM + GV PD IT V ++ C A L D
Sbjct: 194 MTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTC--AKLKDLE 251
Query: 125 IS---HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+ H ++ K IR S+ CLV + + G++ +A L+
Sbjct: 252 MGKRLHLYIVDNKLWIRGSL--LNCLVDMYSKCGKMDEAHGLLS 293
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/398 (39%), Positives = 220/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y ++ EEA LLF E+ G+ T SLL +GA+ G +H ++K
Sbjct: 412 YAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSN 471
Query: 56 ---------------NIEVDVGLGMALKD--VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
NIE + ++D V++ T++I A G +ALE F++M
Sbjct: 472 QCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLE 531
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G KP+ IT+V VL ACSH G++ E HFN M +++GI P +EHY C+V +LGR+G +
Sbjct: 532 TGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLV 591
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E I +MP+ D V LLGACR+H N E AA+ +LE PD+ +Y++LSN ++
Sbjct: 592 EAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHA 651
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
S+ +WK V +IR+ M ERN+ K GC IEV+ VH F
Sbjct: 652 SAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLAS 711
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G++P+ VL D++EE+KE L H+EK+A+ FGL+S IRI KNLRVC D
Sbjct: 712 KIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGD 771
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA IS RE VV D NRFHH KNG CSC D+W
Sbjct: 772 CHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 809
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 35/184 (19%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
+A+ LF +++ G D+ T S+L ACT LG L +G LH +++ + +DV +G +L
Sbjct: 214 DAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLV 273
Query: 69 D-------------------------VMTLTALIVVLAMCGQGNK-ALEYFYEMQIRGVK 102
D VM+ TA+I G+ +K A+E F +M ++
Sbjct: 274 DMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIR 333
Query: 103 PDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGC----LVYILGRAGRIA 158
P+ +F VL AC G + + + + S Y ++ I C L+ + R+GR+
Sbjct: 334 PNHFSFSSVLKAC---GNLSDPYTGEQVYS--YAVKLGIASVNCVGNSLISMYARSGRME 388
Query: 159 KAEE 162
A +
Sbjct: 389 DARK 392
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 65/145 (44%), Gaps = 24/145 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN-IEV 59
+ +S +A+ F ++ G ++ +++ AC++ VG ++ +++K +E
Sbjct: 103 FANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEA 162
Query: 60 DVGLG-----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
DV +G M ++++T T +I A G A++ F +M
Sbjct: 163 DVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDM 222
Query: 97 QIRGVKPDAITFVGVLVACSHAGLV 121
++ G PD T+ VL AC+ GL+
Sbjct: 223 ELSGYVPDRFTYSSVLSACTELGLL 247
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/398 (39%), Positives = 220/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y ++ EEA LLF E+ G+ T SLL +GA+ G +H ++K
Sbjct: 430 YAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSN 489
Query: 56 ---------------NIEVDVGLGMALKD--VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
NIE + ++D V++ T++I A G +ALE F++M
Sbjct: 490 QCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLE 549
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G KP+ IT+V VL ACSH G++ E HFN M +++GI P +EHY C+V +LGR+G +
Sbjct: 550 TGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLV 609
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E I +MP+ D V LLGACR+H N E AA+ +LE PD+ +Y++LSN ++
Sbjct: 610 EAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHA 669
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
S+ +WK V +IR+ M ERN+ K GC IEV+ VH F
Sbjct: 670 SAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLAS 729
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G++P+ VL D++EE+KE L H+EK+A+ FGL+S IRI KNLRVC D
Sbjct: 730 KIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGD 789
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA IS RE VV D NRFHH KNG CSC D+W
Sbjct: 790 CHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 827
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 35/184 (19%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
+A+ LF +++ G D+ T S+L ACT LG L +G LH +++ + +DV +G +L
Sbjct: 232 DAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLV 291
Query: 69 D-------------------------VMTLTALIVVLAMCGQGNK-ALEYFYEMQIRGVK 102
D VM+ TA+I G+ +K A+E F +M ++
Sbjct: 292 DMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIR 351
Query: 103 PDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGC----LVYILGRAGRIA 158
P+ +F VL AC G + + + + S Y ++ I C L+ + R+GR+
Sbjct: 352 PNHFSFSSVLKAC---GNLSDPYTGEQVYS--YAVKLGIASVNCVGNSLISMYARSGRME 406
Query: 159 KAEE 162
A +
Sbjct: 407 DARK 410
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 65/145 (44%), Gaps = 24/145 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN-IEV 59
+ +S +A+ F ++ G ++ +++ AC++ VG ++ +++K +E
Sbjct: 121 FANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEA 180
Query: 60 DVGLG-----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
DV +G M ++++T T +I A G A++ F +M
Sbjct: 181 DVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDM 240
Query: 97 QIRGVKPDAITFVGVLVACSHAGLV 121
++ G PD T+ VL AC+ GL+
Sbjct: 241 ELSGYVPDRFTYSSVLSACTELGLL 265
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/402 (38%), Positives = 233/402 (57%), Gaps = 51/402 (12%)
Query: 2 VEDSACEEALLLF-REVQH----KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN 56
VE+ EE+ LF R +H KG+T ++VT ++LL AC+ LGAL G +H + ++
Sbjct: 251 VENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAERG 310
Query: 57 IEVDVGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFY 94
+ D+ + GM +DV++ +++I A G+ ++A+E ++
Sbjct: 311 FDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYH 370
Query: 95 EMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRA 154
M G PD I F+ VL ACS++G+V+ F + + P++EHY C+V +LGRA
Sbjct: 371 RMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRA 430
Query: 155 GRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILS 214
G++ AE+L++ MP + +L AC+++ ++E E AA+ + EL P+N Y+ L+
Sbjct: 431 GKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSPYITLA 490
Query: 215 NRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV----------------- 257
N YS++++ K RIR+LM ER IKK PGC IEV VHEF+
Sbjct: 491 NIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRDEIYAEIQ 550
Query: 258 -------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLR 310
+AG+ + VL D++E+EKE L H+EKLAI FGL+S PG +RI+KNLR
Sbjct: 551 RLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPPGAPLRIVKNLR 610
Query: 311 VCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
VC+DCH AT +ISKV RE +V D NRFHHF+NG CSC D+W
Sbjct: 611 VCSDCHAATKVISKVTGREILVRDTNRFHHFQNGMCSCNDYW 652
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 228/391 (58%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKG-LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL---- 63
E L LF ++ +G ++ +V++L ACTHLGA +G H ++K E++V +
Sbjct: 216 ECLALFEDMSREGCWRAEESILVNVLSACTHLGAFHLGRCAHGSLLKNITELNVAVMTSL 275
Query: 64 ------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
M K+ ++ + +I L + G G +AL+ F EM G++PD
Sbjct: 276 MDMYVKCGSLQKGLCLFQNMTRKNQLSYSVIISGLGLHGYGRQALQIFSEMVEEGLEPDD 335
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+T+V VL ACSH+GLVDE + F+ M +Y I P+++HYGC+V + GRAG + +A +L++
Sbjct: 336 VTYVSVLSACSHSGLVDEGLDLFDKMKFEYRIEPTMQHYGCMVDLKGRAGLLEEAFQLVQ 395
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MP+ + + LL AC++HDNL+ E AA+ L L N Y++LSN Y+ +++W+
Sbjct: 396 SMPIKANDVLWRSLLSACKVHDNLKLGEIAAENLFRLSSHNPSDYLVLSNMYARAQQWEN 455
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GF 261
+IR M R + + PG L+EV V++FV G+
Sbjct: 456 AAKIRTKMINRGLIQTPGYSLVEVKSKVYKFVSQDKSYCKSGNIYKMIHQMEWQLRFEGY 515
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
+P+ S+V+ D+DEEEK L H++KLAI F L+ G IRII+NLR+CNDCH+ T +
Sbjct: 516 MPDTSQVMLDVDEEEKGERLKGHSQKLAIAFALIHTSQGSAIRIIRNLRMCNDCHSYTKL 575
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+S +Y RE V DRNRFHHFK+G+CSC+D+W
Sbjct: 576 VSMIYEREITVRDRNRFHHFKDGNCSCRDYW 606
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 23/142 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV + E A+ L+ ++ + + D T +L AC L ++ GM +H ++ K +E D
Sbjct: 107 YVNNMNFENAIYLYNDMLQREVEPDNFTYPVVLKACARLAVIQEGMQIHGHVFKLGLEDD 166
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + +L K V + +A+I A + L F +M
Sbjct: 167 VYVQNSLINMYGKCRDIEMSCAIFRRMEQKSVASWSAIIAAHASLAMWWECLALFEDMSR 226
Query: 99 RGV-KPDAITFVGVLVACSHAG 119
G + + V VL AC+H G
Sbjct: 227 EGCWRAEESILVNVLSACTHLG 248
>gi|357477567|ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510124|gb|AES91266.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 611
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/385 (39%), Positives = 221/385 (57%), Gaps = 33/385 (8%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + + +A F+E+ +V++ +L AC GA E G LH ++ K
Sbjct: 227 FAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLCI 286
Query: 61 VGLGMALKDV--------MTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVL 112
V + AL D M + LAM G+ ++A+ F+EM+ GV+PD +TF+ +L
Sbjct: 287 VSVNNALIDTYSKCGNVDMAKLVFNISLAMHGRADEAIRVFHEMEESGVRPDGVTFISLL 346
Query: 113 VACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALD 172
ACSH+GLV++ + F+ M YGI P+IEHYGC+V + GRA R+ KA E I+ MP+ +
Sbjct: 347 YACSHSGLVEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARLQKAYEFIRQMPILPN 406
Query: 173 HFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIREL 232
+ LLGAC IH N+E AE +L E+ P+N G +V+LSN Y+ + KWK V IR
Sbjct: 407 VIIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVAGIRRT 466
Query: 233 MAERNIKKPPGCILIEVDGVVHEFV-------------------------KAGFVPNKSE 267
M E+++KK PG +IE+D V + FV + G+ P
Sbjct: 467 MIEQSMKKIPGWSMIEIDKVNYGFVAGEKPNEVTKEAHDKLREIMLRLREEEGYAPQVRS 526
Query: 268 VLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYN 327
VL D++EEEKE +++ H+EKLA FG+ G ++RI+KNLRVC DCHT +ISKVY
Sbjct: 527 VLHDVEEEEKEDSMSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISKVYQ 586
Query: 328 RETVVMDRNRFHHFKNGSCSCKDFW 352
E +V DR+RFH FK G CSC+D+W
Sbjct: 587 VEIIVRDRSRFHSFKGGFCSCRDYW 611
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 155/398 (38%), Positives = 229/398 (57%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLH---------PY 51
YV +S +EA++L+ +++ G+ D V++VS+L A L AL +G +H P
Sbjct: 264 YVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPN 323
Query: 52 IMKKNIEVD-------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
++ +N +D V M +DV++ T++I CGQG A+ F EM+
Sbjct: 324 LLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRN 383
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD+I FV VL ACSHAGL+D+ +FNLM+E GI P +EH+ C+V +LGRAG+I
Sbjct: 384 SGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAE-CGITPKLEHFACVVDLLGRAGKID 442
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A I+ MP+ D V G LL ACR++ N+ AA +LL L P++ G YV+LSN Y+
Sbjct: 443 EAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSNIYA 502
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ +W V IR +M + IKK PG +E++ VH F+
Sbjct: 503 KAGRWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKKIYEELDVLVG 562
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G++P L D++EE+KE L +H+EKLA+ F +++ PG IR+ KNLRVC D
Sbjct: 563 KMKELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIINTKPGTPIRVTKNLRVCGD 622
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A +ISK+ RE ++ D +RFHHF+ G CSC D+W
Sbjct: 623 CHVAAKLISKIAEREIIIRDTHRFHHFQEGCCSCGDYW 660
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 67/140 (47%), Gaps = 22/140 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV + ++ALL+++ + +G D T +L A + +L VG+ +H ++K ++++
Sbjct: 95 YVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLN 154
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G L +DV++ +++ V A G+ N ALE EM+
Sbjct: 155 LYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEA 214
Query: 99 RGVKPDAITFVGVLVACSHA 118
+KP+ T +L A ++
Sbjct: 215 LNLKPNDCTMASLLPAVTNT 234
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 75/169 (44%), Gaps = 16/169 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +AL L RE++ L + TM SLL A T+ + V +++ +K
Sbjct: 196 YAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNV-LYVKEMFLK------ 248
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACS--HA 118
+ K V++ +I + +A+ + +M+ GV+PD ++ V VL A A
Sbjct: 249 ----LTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSA 304
Query: 119 GLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ R+ F +E+ + P++ L+ + + G + A + M
Sbjct: 305 LSLGRRVHKF---AERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQM 350
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 155/390 (39%), Positives = 227/390 (58%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
E+L+ F ++++G+ DKV +V+++ AC LGA+ +H YI +DV LG A+
Sbjct: 235 ESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMI 294
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
++V+T +A+I GQG KALE F M G+ P+ I
Sbjct: 295 DMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRI 354
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFV +L ACSHAGL++E F+ M ++YG+ P ++HY C+V +LGRAGR+ +A E+I+
Sbjct: 355 TFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEG 414
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP+ D + G LLGACRIH +L+ AER A+ LL+L G YV+LSN Y+++ KW+ +
Sbjct: 415 MPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDM 474
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEF------------------------VKAGFV 262
+ R+LM + ++K PG IEV +++F AG+
Sbjct: 475 AKTRDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYH 534
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ ++VL+D+DEE K+ L H+EKLAI FGL+ G IRI KNLRVC DCHT +
Sbjct: 535 PDTNDVLYDVDEEVKQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFCKFV 594
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S + + +V D RFHHFK G CSC+D+W
Sbjct: 595 SLIEQKTIIVRDAKRFHHFKEGVCSCRDYW 624
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 22/135 (16%)
Query: 11 LLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE---------VD- 60
+FRE+ G D + ++ AC L L+ G +H +K ++ VD
Sbjct: 136 FWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDM 195
Query: 61 ------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITF 108
+ + M +D+ T T +I LA G ++L +F M+ +G+ PD +
Sbjct: 196 YARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVAL 255
Query: 109 VGVLVACSHAGLVDE 123
V V+ AC+ G +++
Sbjct: 256 VTVVYACAKLGAMNK 270
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/390 (40%), Positives = 222/390 (56%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL----- 63
E+ F+++ +G+ +K+T + +L AC++ AL+ G +H ++K I D+ +
Sbjct: 431 ESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALM 490
Query: 64 -----------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
GM+ +DV+T LI LA G+G +AL+ F M+ ++P+A
Sbjct: 491 SMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNAT 550
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFV V+ AC LV+E F M + YGI P+ +HY C+V IL RAG + +AE++I
Sbjct: 551 TFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILT 610
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP + G LL ACR H N+E E+AA+Q L+L P N G+YV LS Y+++ W+ V
Sbjct: 611 MPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDV 670
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GFV 262
++R+LM ER +KK PG IEV G VH FV G+V
Sbjct: 671 AKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGYV 730
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ V+ D+D+E KE A+ H+EKLAI +GL+S P IR+ KNLRVC DCHTAT I
Sbjct: 731 PDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPPETPIRVSKNLRVCTDCHTATKFI 790
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SK+ RE + D +RFHHFKNG CSC D+W
Sbjct: 791 SKITGREIIARDAHRFHHFKNGECSCGDYW 820
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 28/232 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG--- 64
+EA LF +Q +GL DK T VS+L AC+ AL G +H +M+ + + +G
Sbjct: 127 QEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNAL 186
Query: 65 -------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
MA +D ++ T L A G ++L+ ++ M GV+P
Sbjct: 187 ISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSR 246
Query: 106 ITFVGVLVAC-SHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
IT++ VL AC S A L + H ++ ++ + +YI + G + A E+
Sbjct: 247 ITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYI--KCGAVKDAREVF 304
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE--LLPDNGGSYVILS 214
+ +P D ++G LE A ++L+ + PD ILS
Sbjct: 305 ECLP-NRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILS 355
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 25/191 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E +E+L + + +G+ ++T +++L AC L ALE G +H I++ D
Sbjct: 221 YAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSD 280
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL +DV+ +I L GQ +A F+ M
Sbjct: 281 VRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLK 340
Query: 99 RGVKPDAITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V PD +T++ +L AC+ GL + H + K G+ + L+ + +AG +
Sbjct: 341 ECVAPDRVTYLAILSACARPGGLACGKEIHARAV--KDGLVSDVRFGNALINMYSKAGSM 398
Query: 158 AKAEELIKNMP 168
A ++ MP
Sbjct: 399 KDARQVFDRMP 409
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 108/261 (41%), Gaps = 58/261 (22%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V+ EEA +F + + + D+VT +++L AC G L G +H +K + DV
Sbjct: 323 VDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDV 382
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
G AL +DV++ TAL+ A CGQ ++ F +M +
Sbjct: 383 RFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQ 442
Query: 100 GVKPDAITFVGVLVACS-----------HAGLVDERI------------SHFNLMSEKYG 136
GV+ + IT++ VL ACS HA +V I +F S +
Sbjct: 443 GVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDA 502
Query: 137 IRPS-------IEHYGCLVYILGRAGRIAKA---EELIKNMPMALDHFVLGGLLGACRIH 186
IR S + + L+ L + GR +A E++K+ M + ++ ACR+
Sbjct: 503 IRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVR 562
Query: 187 DNLEAAERAAQQLLELLPDNG 207
+ +E R Q + D G
Sbjct: 563 NLVEEGRR---QFASMRKDYG 580
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 77/193 (39%), Gaps = 26/193 (13%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----- 67
+ + + KG D V LL +C L VG +H +I++ ++ +V + L
Sbjct: 31 VLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYV 90
Query: 68 -----------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVG 110
K V++ +I A G G +A F MQ G++PD TFV
Sbjct: 91 HCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVS 150
Query: 111 VLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPM 169
+L ACS A L R H +M + G+ + L+ + + G + A + M
Sbjct: 151 ILSACSSPAALNWGREVHVRVM--EAGLANNATVGNALISMYAKCGSVRDARRVFDAMA- 207
Query: 170 ALDHFVLGGLLGA 182
+ D L GA
Sbjct: 208 SRDEVSWTTLTGA 220
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/391 (39%), Positives = 227/391 (58%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGL-TGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV------ 61
E L+L ++ +G ++ +VS L ACTHLG+ +G +H +++ E++V
Sbjct: 215 ECLMLLGDMSREGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTSL 274
Query: 62 ------------GL----GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
GL MA K+ + T +I LA+ G+G +AL F +M G+ PD
Sbjct: 275 IDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREALRVFSDMLEEGLTPDD 334
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+ +VGVL ACSHAGLV E FN M ++ I+P+I+HYGC+V ++GRAG + +A +LIK
Sbjct: 335 VVYVGVLSACSHAGLVKEGFQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIK 394
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MP+ + V LL AC++H NLE E AA + +L N G Y++L+N Y+ ++KW
Sbjct: 395 SMPIKPNDVVWRSLLSACKVHHNLEIGEIAADNIFKLNKHNPGDYLVLANMYARAQKWAN 454
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GF 261
V RIR M E+N+ + PG L+E + V++FV G+
Sbjct: 455 VARIRTEMVEKNLVQTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQQMEWQLKFEGY 514
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P+ S+VL D+DE+EK L H++KLAI F L+ G +RI +NLR+CNDCHT T
Sbjct: 515 TPDMSQVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSPVRISRNLRMCNDCHTYTKF 574
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS +Y RE V D NRFHHFK+G+CSCKD+W
Sbjct: 575 ISVIYEREITVRDSNRFHHFKDGTCSCKDYW 605
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEALLL+ E+ +G+ D T +L AC+ L AL+ G+ +H ++ +EV
Sbjct: 113 EEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFNAGLEV-------- 164
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV 101
DV LI + CG A F +M + V
Sbjct: 165 -DVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSV 197
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 232/398 (58%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y ++S EAL LF E+Q + D T+ +L AC L AL+ G +H Y ++
Sbjct: 530 YTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGREIHGYALRNGYSED 588
Query: 56 ----NIEVDVGLGMAL-------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
N VD+ + L KD+++ T +I M G G++A+ F +M++
Sbjct: 589 KYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRM 648
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD ++F+ +L ACSH+GL+DE FN+M ++ I P++EHY C+V +L R G +
Sbjct: 649 TGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLV 708
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
KA + IK MP+ D + G LL CRIH +++ AE+ A+++ EL P+N G YV+L+N Y+
Sbjct: 709 KAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYA 768
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ KW++V+++R+ + +R +KK PGC IE+ G ++ FV
Sbjct: 769 EAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRS 828
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G+ P + L + DE EKE AL H+EKLA+ FG+++ PG IR+ KNLRVC D
Sbjct: 829 KMKEEGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGD 888
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH +SK +RE ++ D +RFHHFK+GSCSC+ +W
Sbjct: 889 CHEMAKFMSKSASREIILRDSSRFHHFKDGSCSCRGYW 926
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 23/145 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV- 59
YV + + A+ LF E++ +G+ D + S+L AC G L+ G +H YI + N+E
Sbjct: 429 YVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETN 488
Query: 60 ---------------------DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
DV M KDV++ +I N+AL F EMQ
Sbjct: 489 SFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQ- 547
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE 123
R KPD T +L AC+ +D+
Sbjct: 548 RESKPDGTTVACILPACASLAALDK 572
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 23/142 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
YV++ + + +F ++ G+ D TMV++ +AC ++G L +G LH Y +K
Sbjct: 327 YVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDR 386
Query: 56 ------------------NIEVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
N + V M K V++ T++I G + A++ F EM+
Sbjct: 387 EVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMK 446
Query: 98 IRGVKPDAITFVGVLVACSHAG 119
RGV PD +L AC+ G
Sbjct: 447 SRGVVPDVYAVTSILNACAING 468
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/398 (40%), Positives = 223/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEAL LF E+Q L D+ SLL AC +L A E G LH +I+K +D
Sbjct: 509 YAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLD 568
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ G +L + +++ +A+I LA G G +AL+ F +M
Sbjct: 569 IFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLK 628
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV P+ IT V VL AC+HAGLV E +F M E +G +P EHY C++ +LGRAG+I
Sbjct: 629 EGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKIN 688
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A EL+ MP + V G LLGA RIH ++E RAA+ L L P+ G++V+L+N Y+
Sbjct: 689 EAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYA 748
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S+ KW+ V +R LM + +KK PG IEV V+ F+
Sbjct: 749 SAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSD 808
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
KAG+VP L D+++ EKE L H+EKLA+ FGL++ G IR+ KNLRVC D
Sbjct: 809 LMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVD 868
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA I K+ +RE +V D NRFHHFK+GSCSC D+W
Sbjct: 869 CHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 906
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 28/183 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ED EAL LF E+ +G+ ++ T+ ++L + L + V +H +K D
Sbjct: 411 YWEDM---EALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSD 467
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + +L D+++ T++I A GQG +AL+ F EMQ
Sbjct: 468 IYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQD 527
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+KPD +L AC++ ++ + H +++ KYG I LV + + G I
Sbjct: 528 MELKPDRFVCSSLLNACANLSAFEQGKQLHVHIL--KYGFVLDIFAGNSLVNMYAKCGSI 585
Query: 158 AKA 160
A
Sbjct: 586 DDA 588
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 36/220 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ AL+ F E+ G+ ++ T S+L AC+ + L +G +H ++ E D
Sbjct: 132 YAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGD 191
Query: 61 VGLGMAL----------------------KDVMTLTALI---VVLAMCGQGNKALEYFYE 95
V + L ++V++ AL V CG+ A+ FYE
Sbjct: 192 VFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGE---AVGLFYE 248
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDE---RISHFNLMSEKYGIRPSIEHYGCLVYILG 152
M + G+KP+ + ++ AC+ GL D +I H L+ Y P + LV +
Sbjct: 249 MVLSGIKPNEFSLSSMVNACT--GLRDSSRGKIIHGYLIKLGYDWDPFSAN--ALVDMYA 304
Query: 153 RAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAA 192
+ G +A A + + + D ++ C +H++ E A
Sbjct: 305 KVGDLADAISVFEKIKQP-DIVSWNAVIAGCVLHEHHEQA 343
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 22/117 (18%)
Query: 22 LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL--------------GMAL 67
T V+ LL C +L G+ +H +I K + D + G A
Sbjct: 52 FTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYAR 111
Query: 68 K--------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACS 116
K D+++ +ALI A G G AL F+EM + GVK + TF VL ACS
Sbjct: 112 KLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACS 168
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 42/205 (20%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ C EA+ LF E+ G+ ++ ++ S++ ACT L G +H Y++K +
Sbjct: 233 YVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDW- 291
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
D + AL+ + A G A+ F +++ +PD +++ V+ C
Sbjct: 292 --------DPFSANALVDMYAKVGDLADAISVFEKIK----QPDIVSWNAVIAGC----- 334
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLL 180
+ H EH+ + +LG+ R + + M M D FV GL+
Sbjct: 335 ----VLH--------------EHHEQALELLGQMKR--QLHSSLMKMDMESDLFVSVGLV 374
Query: 181 GACRIHDNLEAAERAAQQLLELLPD 205
D LE A A LLP+
Sbjct: 375 DMYSKCDLLEDARMA----FNLLPE 395
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 159/399 (39%), Positives = 226/399 (56%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
YV++S ++AL LFR V+ + + T+ S+LL C++L AL G +H + MK +
Sbjct: 264 YVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSR 323
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
++ +G +L +DV+ A+I A G G +A+ F M+
Sbjct: 324 NLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMK 383
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV+P+ ITFV VL AC H GL D I F M E YGI P ++HY C+V +L RAG++
Sbjct: 384 DEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKL 443
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A +LI++MP G LL ACR++ NLE AE AA +L+E P + G+YV L+N Y
Sbjct: 444 ERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIY 503
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF--------------------- 256
+ + +W V R+R M + + K PG IE+ GV+HEF
Sbjct: 504 AGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLA 563
Query: 257 --VKA-GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+KA G+VP+ VL D+DE K L H+EKLAI+FGL+S PG+ +RI KNLRVC
Sbjct: 564 ERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCG 623
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A +ISK+ +RE ++ D RFHHF+ G CSC D+W
Sbjct: 624 DCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 662
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 159/399 (39%), Positives = 226/399 (56%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
YV++S ++AL LFR V+ + + T+ S+LL C++L AL G +H + MK +
Sbjct: 215 YVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSR 274
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
++ +G +L +DV+ A+I A G G +A+ F M+
Sbjct: 275 NLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMK 334
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV+P+ ITFV VL AC H GL D I F M E YGI P ++HY C+V +L RAG++
Sbjct: 335 DEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKL 394
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A +LI++MP G LL ACR++ NLE AE AA +L+E P + G+YV L+N Y
Sbjct: 395 ERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIY 454
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF--------------------- 256
+ + +W V R+R M + + K PG IE+ GV+HEF
Sbjct: 455 AGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLA 514
Query: 257 --VKA-GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+KA G+VP+ VL D+DE K L H+EKLAI+FGL+S PG+ +RI KNLRVC
Sbjct: 515 ERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCG 574
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A +ISK+ +RE ++ D RFHHF+ G CSC D+W
Sbjct: 575 DCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 613
>gi|77548549|gb|ABA91346.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 624
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 148/394 (37%), Positives = 225/394 (57%), Gaps = 46/394 (11%)
Query: 5 SACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG 64
SA + L +F + + +++T+V+++ AC LGA+ G+W H Y +K+ + V+ +
Sbjct: 231 SAADAILEMFVRMLSLAIKPNEITLVAVIGACGELGAVSHGVWAHTYAVKRRLAVNCIVA 290
Query: 65 MAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVK 102
AL +D A++ LA+ G G AL F M GV
Sbjct: 291 TALVEMYAGCGRLDLAEQVFAAASDRDTRCYNAMLHGLAVHGHGRAALSLFDRMHGEGVP 350
Query: 103 PDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE 162
D +T + V+ AC+HAGLVDE + +F+ M ++GI PSIEHYGC+V +L RAGR+ AE+
Sbjct: 351 VDGVTVLSVMCACAHAGLVDEGLDYFDRMEIEFGIEPSIEHYGCMVDMLSRAGRLNDAEK 410
Query: 163 LIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRK 222
LI MP+ + + L+ AC IH LE ++ +L+ L PD+ G++V++SN Y+++ +
Sbjct: 411 LIHGMPIVPNAAIYRSLIRACGIHGKLELGKKMIAELMRLEPDDSGNHVLISNFYATTNR 470
Query: 223 WKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------K 258
W K+ R+ M I K PG ++++GV+HEF+ +
Sbjct: 471 WDDAKKARKEMKSMGIDKSPGSSFVDINGVLHEFLVGDKTHPASKEIYAMVEDIETRLSE 530
Query: 259 AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTA 318
G + S LFD++EE+K AL+ H+E+LAI F L++ PG IRIIKNLRVC DCH +
Sbjct: 531 CGHRSSTSSALFDVEEEDKADALSYHSERLAIAFALIASNPGAPIRIIKNLRVCADCHES 590
Query: 319 TNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
++S+VY RE V+ DR RFHHF++G CSC DFW
Sbjct: 591 AKLVSRVYGREIVMRDRTRFHHFRDGVCSCGDFW 624
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 160/397 (40%), Positives = 227/397 (57%), Gaps = 47/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTG-DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
V+++ EEA+ +F +Q + D VTM+S+ AC HLGAL++ W++ YI K I++D
Sbjct: 444 VQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLD 503
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG L +DV TA I +AM G +A+E F EM
Sbjct: 504 VRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIE 563
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+G+KPD + F+G L AC H GLV + FN M + +G+ P HYGC+V +LGRAG +
Sbjct: 564 QGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLE 623
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LIK+MP + + LL ACR+ N+E A AA+++ L P+ GSYV+LSN Y+
Sbjct: 624 EALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYA 683
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
S+ +W + ++R M E+ ++KPPG +I++ G HEF
Sbjct: 684 SAGRWNDMAKVRLSMKEKGLRKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAMLDELSQ 743
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G VP+ S VL D+DE+EK L+ H+EKLA+ FGL+S G IRI+KNLRVC+
Sbjct: 744 RASDLGHVPDLSNVLMDVDEQEKIFMLSRHSEKLAMAFGLISSNKGTTIRIVKNLRVCSY 803
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDF 351
CH+ SKVYNRE ++ D NRFH + G CSC DF
Sbjct: 804 CHSFAKFASKVYNREIILRDNNRFHFIRQGKCSCSDF 840
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 22/128 (17%)
Query: 12 LLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKDV- 70
L FR V+ + + + VTMV ++ AC L LE G ++ +I IEV+ + AL D+
Sbjct: 221 LFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMY 280
Query: 71 MTLTALIVV-----------LAMC----------GQGNKALEYFYEMQIRGVKPDAITFV 109
M A+ + L +C G +AL M G++PD I+ +
Sbjct: 281 MKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISML 340
Query: 110 GVLVACSH 117
+ +CS
Sbjct: 341 SAISSCSQ 348
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 91/223 (40%), Gaps = 23/223 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y C+EA+LLF + + G++ DK T L C G+ +H I+K +
Sbjct: 108 YASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMDYA-- 165
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
KD+ +L+ A CG+ + A + F EM R V +++ ++ +
Sbjct: 166 -------KDLFVQNSLVHFYAECGELDCARKVFDEMSERNV----VSWTSMICGYARREF 214
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAE---ELIKNMPMALDHFVLG 177
+ + F M + P+ C++ + + E + I++ + ++ ++
Sbjct: 215 AKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMIS 274
Query: 178 GLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSS 220
L+ + ++ A+R L + G S + L N +S+
Sbjct: 275 ALVDMYMKCNAIDIAKR-------LFDEYGASNLDLCNAMASN 310
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 13/134 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV +EAL + + G+ D+++M+S + +C+ L + G H Y+++ E
Sbjct: 311 YVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW 370
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+ ALI + C + + A F M + V +T+ ++ G
Sbjct: 371 DNI---------CNALIDMYMKCHRQDTAFRIFDRMSNKTV----VTWNSIVAGYIENGE 417
Query: 121 VDERISHFNLMSEK 134
VD FN M EK
Sbjct: 418 VDAAWETFNTMPEK 431
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 227/394 (57%), Gaps = 59/394 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V+ EEAL LF+E++ + + + +TMV +L AC E G W+H YI + I
Sbjct: 212 FVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXES 271
Query: 61 VGLGMAL----------------------KDVMTLTALIVV------------LAMCGQG 86
+ L A+ KD+++ T ++V LAM G G
Sbjct: 272 LTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHG 331
Query: 87 NKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGC 146
A+ F +MQ VKP+A+TF +L ACSH GLV+E + FN M YG+ P ++HY C
Sbjct: 332 KDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYAC 391
Query: 147 LVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDN 206
+V ILGRAG + +A ELI+ MPMA V G LLGAC IH+N+ AE+A QL+EL P N
Sbjct: 392 MVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGN 451
Query: 207 GGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------- 257
G+YV+LSN Y+ + KW +V +R+LM + +KK PGC IEVDG+VHEF+
Sbjct: 452 HGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSA 511
Query: 258 ---------------KAGFVPNKSEVLFDMDEEE-KETALNLHTEKLAITFGLVSPMPGV 301
G+VPNKS +L ++EE+ KE AL LH+EKLAI FGL+S
Sbjct: 512 KKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQ 571
Query: 302 LIRIIKNLRVCNDCHTATNIISKVYNRETVVMDR 335
IRI+KNLRVC DCH+ ++SK+Y+RE ++ DR
Sbjct: 572 PIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDR 605
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 26/192 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLT-GDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y S ++LL+F + H+ DK T L+ A + L L G H ++K +
Sbjct: 110 YASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGS 169
Query: 60 DV----------------GLGMAL------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
DV GLG + +DV++ ++I G +ALE F EM+
Sbjct: 170 DVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEME 229
Query: 98 IRGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ VKP+ IT VGVL AC+ + R H + E+ I S+ ++ + + G
Sbjct: 230 TQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYI--ERNRIXESLTLSNAMLDMYTKCGS 287
Query: 157 IAKAEELIKNMP 168
+ A+ L MP
Sbjct: 288 VEDAKRLFDKMP 299
>gi|302765332|ref|XP_002966087.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
gi|300166901|gb|EFJ33507.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
Length = 449
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 160/394 (40%), Positives = 221/394 (56%), Gaps = 48/394 (12%)
Query: 7 CE--EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG 64
CE EAL LF + +G+ VT+ S+L AC GAL+VG +H + V
Sbjct: 56 CELLEALELFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQ 115
Query: 65 MALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIRGVK 102
AL D+ ++ TA+I LA GQG++ALE F EM + G+
Sbjct: 116 TALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMV 175
Query: 103 PDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE 162
DA TF+ VL ACSHAGL+ E + F+ M E Y I P+ HY + +GRAGR+ AEE
Sbjct: 176 ADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEE 235
Query: 163 LIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRK 222
LI +MP + LL ACRIH E A + A+ L +L P++ +Y +L N Y+++ +
Sbjct: 236 LIHSMPFHPETVTWKTLLNACRIHSQAERATKVAELLAKLAPEDSMAYTLLGNVYAATER 295
Query: 223 WKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------K 258
+ R+R+ M +R +KK PG IEV VHEFV +
Sbjct: 296 YGDQMRVRKSMTDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMRE 355
Query: 259 AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTA 318
AG+VPN +VL ++EEEKE + LH+EKLAI FGL++ PG + I+KNLRVC+DCH A
Sbjct: 356 AGYVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAA 415
Query: 319 TNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
T +I+K+ R VV D +RFHHF++G CSCKD+W
Sbjct: 416 TKVIAKIMRRRIVVRDTHRFHHFEDGQCSCKDYW 449
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 163/398 (40%), Positives = 223/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEAL LF E+Q L D+ SLL AC +L A E G LH +I+K +D
Sbjct: 536 YAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLD 595
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ G +L + +++ +A+I LA G G +AL+ F +M
Sbjct: 596 IFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLK 655
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV P+ IT V VL AC+HAGLV E +F M E +G +P EHY C++ +LGRAG+I
Sbjct: 656 EGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKIN 715
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A EL+ MP + V G LLGA RIH ++E RAA+ L L P+ G++V+L+N Y+
Sbjct: 716 EAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYA 775
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S+ KW+ V +R LM + +KK PG IEV V+ F+
Sbjct: 776 SAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSD 835
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
KAG+VP L D+++ EKE L H+EKLA+ FGL++ G IR+ KNLRVC D
Sbjct: 836 LMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVD 895
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA I K+ +RE +V D NRFHHFK+GSCSC D+W
Sbjct: 896 CHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 933
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 28/183 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ED EAL LF E+ +G+ ++ T+ ++L + L + V +H +K D
Sbjct: 438 YWEDM---EALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSD 494
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + +L D+++ T++I A GQG +AL+ F EMQ
Sbjct: 495 IYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQD 554
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+KPD +L AC++ ++ + H +++ KYG I LV + + G I
Sbjct: 555 MELKPDRFVCSSLLNACANLSAFEQGKQLHVHIL--KYGFVLDIFAGNSLVNMYAKCGSI 612
Query: 158 AKA 160
A
Sbjct: 613 DDA 615
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 36/220 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ AL+ F E+ G+ ++ T S+L AC+ + L +G +H ++ E D
Sbjct: 132 YAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGD 191
Query: 61 VGLGMAL----------------------KDVMTLTALI---VVLAMCGQGNKALEYFYE 95
V + L ++V++ AL V + CG+ A+ FYE
Sbjct: 192 VFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGE---AVGLFYE 248
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDE---RISHFNLMSEKYGIRPSIEHYGCLVYILG 152
M + G+KP+ + ++ AC+ GL D +I H L+ Y P + LV +
Sbjct: 249 MVLSGIKPNEFSLSSMVNACT--GLRDSSRGKIIHGYLIKLGYDWDPFSAN--ALVDMYA 304
Query: 153 RAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAA 192
+ G +A A + + + D ++ C +H++ E A
Sbjct: 305 KVGDLADAISVFEKIKQP-DIVSWNAVIAGCVLHEHHEQA 343
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 96/253 (37%), Gaps = 62/253 (24%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E+AL L +++ G+ + T+ S L AC +G E+G LH +MK ++E D+ + + L
Sbjct: 341 EQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGL 400
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
KD++ A+I + + +AL F EM G+ +
Sbjct: 401 VDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQ 460
Query: 106 ITFVGVLVACSHAGL-VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL- 163
T +L S AGL V + +S K G I L+ G+ + AE +
Sbjct: 461 TTLSTILK--STAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIF 518
Query: 164 ---------------------------------IKNMPMALDHFVLGGLLGACRIHDNLE 190
+++M + D FV LL AC NL
Sbjct: 519 EECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACA---NLS 575
Query: 191 AAERAAQQLLELL 203
A E+ Q + +L
Sbjct: 576 AFEQGKQLHVHIL 588
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 22/117 (18%)
Query: 22 LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL--------------GMAL 67
T V+ LL C +L G+ +H +I K + D + G A
Sbjct: 52 FTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYAR 111
Query: 68 K--------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACS 116
K D+++ +ALI A G G AL F+EM + GVK + TF VL ACS
Sbjct: 112 KLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACS 168
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 23/154 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ C EA+ LF E+ G+ ++ ++ S++ ACT L G +H Y++K + D
Sbjct: 233 YVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWD 292
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
AL D+++ A+I + +ALE +M+
Sbjct: 293 PFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR 352
Query: 99 RGVKPDAITFVGVLVACSHAGLVD-ERISHFNLM 131
G+ P+ T L AC+ GL + R H +LM
Sbjct: 353 SGICPNIFTLSSALKACAGMGLKELGRQLHSSLM 386
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 157/391 (40%), Positives = 226/391 (57%), Gaps = 48/391 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LF +Q +G+ + +M+S+L C L +L+ G +H +++ + D+ + L
Sbjct: 318 EALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLI 377
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
KDV+ ++I + G G +AL F++M GV+PD +
Sbjct: 378 TMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEV 437
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF+GVL ACS++G V E F M Y + P IEHY C+V +LGRAGR+ +A EL++
Sbjct: 438 TFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEK 497
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MPM D V G LLGACR H L+ AE A ++L +L P N G YV+LS+ Y++ +W+ V
Sbjct: 498 MPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDV 557
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------------KAGF 261
+ +R+ + R IK PGC IEV+ VH F +AG+
Sbjct: 558 EVLRKKINRRVIKF-PGCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLEKLSGFLREAGY 616
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P+ S VL D+DEEEK +L H+E+LA+ +GL+ G+ IR++KNLRVC DCH+A +
Sbjct: 617 CPDGSFVLHDVDEEEKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKL 676
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
I+KV RE ++ D NRFHHFK+GSCSCKDFW
Sbjct: 677 IAKVTGREIILRDANRFHHFKDGSCSCKDFW 707
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEAL +F ++ G+ D+VT + +L AC++ G ++ G + MK +V+
Sbjct: 411 YSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFE-AMKCTYQVE 469
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSH 117
G + ++ +L G+ ++A+E +M + +PDAI + +L AC +
Sbjct: 470 PG-------IEHYACMVDLLGRAGRVDEAMELVEKMPM---EPDAIVWGALLGACRN 516
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 159/390 (40%), Positives = 221/390 (56%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
+A F ++ +G+ D T VS+L AC GALE +H + + + D+ +G AL
Sbjct: 708 DAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALV 767
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+DV + T +I LA G+G +AL++F +M+ G KP+
Sbjct: 768 HMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGY 827
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
++V VL ACSHAGLVDE F M++ YGI P++EHY C+V +LGRAG + +AE I N
Sbjct: 828 SYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILN 887
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP+ D G LLGAC + NLE AE AA++ L+L P + +YV+LSN Y+++ KW++
Sbjct: 888 MPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQK 947
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGFV 262
+R +M + I+K PG IEVD +H FV G+V
Sbjct: 948 LLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKAKGYV 1007
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ VL + D+E KE AL H+EKLAI +GL+ IR+ KNLRVC+DCHTAT I
Sbjct: 1008 PDTRLVLRNTDQEHKEQALCSHSEKLAIVYGLMHTQSKDPIRVYKNLRVCSDCHTATKFI 1067
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SK+ RE V D RFHHFK+G CSC D+W
Sbjct: 1068 SKITGREIVARDAKRFHHFKDGVCSCGDYW 1097
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 26/226 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LF ++Q +G D T +++L A ALE +H + + VD+ +G AL
Sbjct: 608 EALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGL-VDLRVGNALV 666
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
++V T T +I LA G G+ A +F +M G+ PDA
Sbjct: 667 HTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDAT 726
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
T+V +L AC+ G + E + + + G+ + LV++ + G I A + +
Sbjct: 727 TYVSILSACASTGAL-EWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDD 785
Query: 167 MPMALDHFVLGGLLGACRIHD-NLEAAERAAQQLLELLPDNGGSYV 211
M + D F ++G H LEA + + E NG SYV
Sbjct: 786 M-VERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYV 830
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 124/290 (42%), Gaps = 34/290 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+EA LF ++Q +G + T VS+L A GALE +H + + + +D+ +G AL
Sbjct: 302 QEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNAL 361
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+D+ + T +I LA G+G +A F +MQ G P+
Sbjct: 362 VHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNL 421
Query: 106 ITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
T++ +L A + A E + + +E+ G + L+++ + G I A +
Sbjct: 422 TTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVF 481
Query: 165 KNM---PMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSR 221
M + + ++GGL H+ + Q+ L+PD+ +Y+ L N + S+
Sbjct: 482 DGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQE--GLVPDS-TTYLSLLNTHGSTD 538
Query: 222 KWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFD 271
+ V + + E + +H +++ G + + + +LFD
Sbjct: 539 ALEWVNEVHKHAVETGLISD----FRVGSAFIHMYIRCGSI-DDARLLFD 583
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 88/189 (46%), Gaps = 23/189 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E E+A+ ++ +++ + +++T +S+L AC L+ G +H +I++ + D
Sbjct: 194 YAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSD 253
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL ++V++ T +I LA G+G +A F +MQ
Sbjct: 254 VRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQR 313
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G P++ T+V +L A + AG + E + + + G+ + LV++ ++G I
Sbjct: 314 EGFIPNSYTYVSILNANASAGAL-EWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSID 372
Query: 159 KAEELIKNM 167
A + M
Sbjct: 373 DARVVFDGM 381
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 124/310 (40%), Gaps = 68/310 (21%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLL-----------LACTHLGALEVGM---------WL 48
EA +F ++Q +GL D T +SLL + H A+E G+ ++
Sbjct: 507 EAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFI 566
Query: 49 HPYIMKKNIEVDVGL---GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
H YI +I+ D L ++++ V T A+I A G +AL F +MQ G PDA
Sbjct: 567 HMYIRCGSID-DARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDA 625
Query: 106 ITFVGVLVA----------------CSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVY 149
TF+ +L A + AGLVD R+ + LV+
Sbjct: 626 TTFINILSANVDEEALEWVKEVHSHATDAGLVDLRVGN------------------ALVH 667
Query: 150 ILGRAGRIAKAEELIKNM---PMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDN 206
+ G + A+++ +M + ++GGL HD A Q L E + +
Sbjct: 668 TYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHD---AFSHFLQMLREGIVPD 724
Query: 207 GGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKS 266
+YV + + +S+ + VK + + L + +VH + K G + +
Sbjct: 725 ATTYVSILSACASTGALEWVKEVHNHAVSAGLVSD----LRVGNALVHMYAKCGSIDDAR 780
Query: 267 EVLFDMDEEE 276
V DM E +
Sbjct: 781 SVFDDMVERD 790
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 160/399 (40%), Positives = 227/399 (56%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ E A+ LF+ +Q + + +T+ S L AC HLGAL +G W+H I K+ +E++
Sbjct: 389 YAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELN 448
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL K+V++ A+I + GQG +AL+ + +M
Sbjct: 449 VYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLD 508
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ P + TF+ V+ ACSH GLVDE F +M+ +Y I P IEH C+V +LGRAG++
Sbjct: 509 ARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLN 568
Query: 159 KAEELIKNMPM-ALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A ELI P A+ V G LLGAC +H N + A+ A+Q+L EL +N G YV+LSN Y
Sbjct: 569 EALELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLY 628
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF--------------------- 256
+S + + + +R+ R + K PGC LIE+ H F
Sbjct: 629 TSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHLHPQSEAIYSYLERLT 688
Query: 257 ---VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
++AG+ P L+D++EEEKE + +H+EKLAI FGL+S PG IRIIKNLRVC
Sbjct: 689 AKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCL 748
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH AT ISKV R VV D +RFHHF++G CSC D+W
Sbjct: 749 DCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 78/190 (41%), Gaps = 25/190 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + E ++ LF+E+ G + T+V+++ + G + LH +++K ++ D
Sbjct: 288 YSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDAD 347
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL K + + A+I A G A+ F MQ
Sbjct: 348 ALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQE 407
Query: 99 RGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V+P+ IT L AC+H G + + H + EK + ++ L+ + + G I
Sbjct: 408 LNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLEL--NVYVMTALIDMYAKCGSI 465
Query: 158 AKAEELIKNM 167
A+A + M
Sbjct: 466 AEARSIFDRM 475
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 157/401 (39%), Positives = 228/401 (56%), Gaps = 49/401 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ +AL LFRE+ GL D +VS+L A LG +E G WLH Y+ IE+
Sbjct: 216 YVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELS 275
Query: 61 VG-LGMALKDVMT-----------------------LTALIVVLAMCGQGNKALEYFYEM 96
G +G AL D+ + ++I LA+ G +AL+ F EM
Sbjct: 276 SGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEM 335
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ ++P+ ITF+G+L CSH GLV+E +F M EKY I P I+HYGC++ + GRAGR
Sbjct: 336 ERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGR 395
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ A +I+NMP D +L A H ++E + AA + +EL PD+ SYV+LSN
Sbjct: 396 LEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNI 455
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA----------------- 259
Y+ + +W V +IR +M +R +KK GC + V+G VHEF+
Sbjct: 456 YAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVNGKVHEFLLGKELDSSYSGQVLAKIAE 515
Query: 260 --------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
G+ P+ ++VL D+++E KE+ LNLH+EK+AI FGL+ I I+KNLRV
Sbjct: 516 VVSRLKLQGYEPDLTQVLLDIEDEGKESLLNLHSEKMAIAFGLIHINKSAPIHIVKNLRV 575
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH ++SKVYNR+ ++ D+NRFHHF+NG CSC ++W
Sbjct: 576 CCDCHCFMKLVSKVYNRQIIMRDQNRFHHFENGCCSCNEYW 616
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE 123
M+ KDV+T T++I KAL+ F EM G++PD V VL A + G V+E
Sbjct: 201 MSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEE 259
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 158/391 (40%), Positives = 223/391 (57%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKG-LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EAL LF+ +Q G + D+V ++S++ A + LG LE+G W+ +I + +E V LG AL
Sbjct: 168 EALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTAL 227
Query: 68 KD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D V+T TALI LA+ G+ +AL FYEM+ G +PD
Sbjct: 228 VDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDH 287
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TF GVLVACSH GLV E F + +YG+ P EHYGC+V +LGRAG + +A + +
Sbjct: 288 VTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVD 347
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP+ + + LLGAC H+ +E AE+ +++ EL + G YV+LSN Y +W +
Sbjct: 348 GMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAE 407
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GF 261
+R M E+ I K PGC LI V+ ++HEFV G+
Sbjct: 408 KAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSMIDSLKVVGY 467
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P+ S VLFD++EEEKE+ L H+EKLA+ F L+ IR++KNLR+C+DCH
Sbjct: 468 TPDISNVLFDIEEEEKESTLGYHSEKLAVAFALLCFKDSRTIRVMKNLRICHDCHCFMKY 527
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S V+ RE ++ DRNRFHHF GSCSC+D+W
Sbjct: 528 ASDVFEREIIIRDRNRFHHFSKGSCSCRDYW 558
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 99/262 (37%), Gaps = 74/262 (28%)
Query: 21 GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV--------------GLGMA 66
G++ D T +L AC L+ G+ LH + K + DV L A
Sbjct: 82 GVSPDHFTFPFVLKACAR---LQTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFA 138
Query: 67 LK--------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRG-VKPDAITFVGVLVAC-- 115
LK D+++ +++I A G G +AL F MQ+ G VKPD + + V+ A
Sbjct: 139 LKVFEEMPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISI 198
Query: 116 ---------------------------------SHAGLVDERISHFNLMSEKYGIRPSIE 142
S G ++E + F+ M E+ ++
Sbjct: 199 LGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGER-----NVL 253
Query: 143 HYGCLVYILGRAGRIAKAEEL---IKNMPMALDHFVLGGLLGACR----IHDNLEAAERA 195
+ L+ L GR A+A + ++N DH G+L AC + + E
Sbjct: 254 TWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESI 313
Query: 196 AQQL-LELLPDNGGSYVILSNR 216
+ +E LP++ G V L R
Sbjct: 314 RNEYGMEPLPEHYGCMVDLLGR 335
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 158/391 (40%), Positives = 223/391 (57%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKG-LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EAL LF+ +Q G + D+V ++S++ A + LG LE+G W+ +I + +E V LG AL
Sbjct: 168 EALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTAL 227
Query: 68 KD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D V+T TALI LA+ G+ +AL FYEM+ G +PD
Sbjct: 228 VDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDH 287
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TF GVLVACSH GLV E F + +YG+ P EHYGC+V +LGRAG + +A + +
Sbjct: 288 VTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVD 347
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP+ + + LLGAC H+ +E AE+ +++ EL + G YV+LSN Y +W +
Sbjct: 348 GMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAE 407
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GF 261
+R M E+ I K PGC LI V+ ++HEFV G+
Sbjct: 408 KAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSMIDSLKVVGY 467
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P+ S VLFD++EEEKE+ L H+EKLA+ F L+ IR++KNLR+C+DCH
Sbjct: 468 TPDISNVLFDIEEEEKESTLGYHSEKLAVAFALLCFKDSRTIRVMKNLRICHDCHCFMKY 527
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S V+ RE ++ DRNRFHHF GSCSC+D+W
Sbjct: 528 ASDVFEREIIIRDRNRFHHFSKGSCSCRDYW 558
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 99/262 (37%), Gaps = 74/262 (28%)
Query: 21 GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV--------------GLGMA 66
G++ D T +L AC L+ G+ LH + K + DV L A
Sbjct: 82 GVSPDHFTFPFVLKACAR---LQTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFA 138
Query: 67 LK--------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRG-VKPDAITFVGVLVAC-- 115
LK D+++ +++I A G G +AL F MQ+ G VKPD + + V+ A
Sbjct: 139 LKAFEEMPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISI 198
Query: 116 ---------------------------------SHAGLVDERISHFNLMSEKYGIRPSIE 142
S G ++E + F+ M E+ ++
Sbjct: 199 LGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGER-----NVL 253
Query: 143 HYGCLVYILGRAGRIAKAEEL---IKNMPMALDHFVLGGLLGACR----IHDNLEAAERA 195
+ L+ L GR A+A + ++N DH G+L AC + + E
Sbjct: 254 TWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESI 313
Query: 196 AQQL-LELLPDNGGSYVILSNR 216
+ +E LP++ G V L R
Sbjct: 314 RNEYGMEPLPEHYGCMVDLLGR 335
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 157/399 (39%), Positives = 228/399 (57%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ E A+ LF+++Q + + +T+ S L AC LGAL +G W+H I + +E++
Sbjct: 398 YAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELN 457
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL K+V++ +I + GQG +AL+ + +M
Sbjct: 458 VYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMD 517
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ P + TF+ VL ACSH GLV E + F M+ YGI P IEH C+V +LGRAG++
Sbjct: 518 AHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLK 577
Query: 159 KAEELIKNMP-MALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A ELI P A+ + G LLGAC +H + + A+ A+Q+L EL P+N G YV+LSN Y
Sbjct: 578 EAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKLFELEPENTGYYVLLSNLY 637
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF--------------------- 256
+S +++ + +R+ R + K PGC LIE+ H F
Sbjct: 638 TSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAGDRAHPQSDAIYLYLEKLT 697
Query: 257 ---VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
++AG+ P+ L+D++EEEKE + +H+EKLAI FGL++ PG IRIIKNLRVC
Sbjct: 698 AKMIEAGYRPDTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLNTEPGTEIRIIKNLRVCL 757
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH AT IISKV R VV D +RFHHF++G CSC D+W
Sbjct: 758 DCHNATKIISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 796
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 22/129 (17%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----- 67
LF+E+ GL T+V+L+ + G + LH +++K ++ + + AL
Sbjct: 309 LFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYC 368
Query: 68 -----------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVG 110
K + + A+I A G A+ F +MQ V+P+ +T
Sbjct: 369 RFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISS 428
Query: 111 VLVACSHAG 119
L AC+ G
Sbjct: 429 ALSACAQLG 437
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 158/401 (39%), Positives = 229/401 (57%), Gaps = 54/401 (13%)
Query: 5 SACEE------ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
SAC + AL L RE+ + + VTMVS L AC+ L AL G +H +I++ ++
Sbjct: 573 SACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLD 632
Query: 59 ---------VDVGLG--------------MALKDVMTLTALIVVLAMCGQGNKALEYFYE 95
+D+ G M +D+++ +I V M G G A+ F +
Sbjct: 633 TCNFILNSLIDM-YGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQ 691
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
+ G+KP+ ITF +L ACSH+GL++E +F +M +Y + P++E Y C+V +L RAG
Sbjct: 692 FRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAG 751
Query: 156 RIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSN 215
+ + E I+ MP + V G LLGACRIH N + AE AA+ L EL P + G+YV+++N
Sbjct: 752 QFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMAN 811
Query: 216 RYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------ 257
YS++ +W+ +IR LM ER + KPPGC IEV +H FV
Sbjct: 812 IYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMES 871
Query: 258 ------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
+ G+VP+ + VL D+DE+EKE +L H+EK+A+ FGL+S G +RIIKNLRV
Sbjct: 872 LYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRV 931
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH+AT ISKV R+ ++ D RFHHF +G CSC D+W
Sbjct: 932 CGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 972
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 27/183 (14%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-- 67
AL F+ + G+ + T+ L AC + L++G +H Y+++ +IE+ G+G AL
Sbjct: 483 ALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALIS 542
Query: 68 --------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
+DV+ ++I A G+ AL+ EM + V+ + +T
Sbjct: 543 MYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVT 602
Query: 108 FVGVLVACSHAGLVDE--RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
V L ACS + + I F + + G+ L+ + GR G I K+ +
Sbjct: 603 MVSALPACSKLAALRQGKEIHQFII---RCGLDTCNFILNSLIDMYGRCGSIQKSRRIFD 659
Query: 166 NMP 168
MP
Sbjct: 660 LMP 662
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 24/155 (15%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK-KNIEVDVGLGMAL 67
EAL +FR++ +G+ + +T+ S + ACT+L L G +H Y +K + ++ D+ +G +L
Sbjct: 345 EALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSL 404
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D+++ A++ A+ G +A+E EM+ +G++PD
Sbjct: 405 VDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDI 464
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPS 140
IT+ G++ + G + F M G+ P+
Sbjct: 465 ITWNGLVTGFTQYGDGKAALEFFQRM-HSMGMDPN 498
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 68/163 (41%), Gaps = 22/163 (13%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE--------- 58
EE + LF + ++G+ D + AC+ L VG ++ Y++ E
Sbjct: 172 EETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSI 231
Query: 59 ---------VDVGL----GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+D+ + KDV ++ G+ KAL+ +M++ GVKPD
Sbjct: 232 LDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQ 291
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLV 148
+T+ ++ + +G +E +F M +P++ + L+
Sbjct: 292 VTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALI 334
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++AL +++ G+ D+VT +++ G E Y ++
Sbjct: 266 YTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEA---SKYFLEMG---- 318
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
GL +V++ TALI G +AL F +M + GVKP++IT + AC++ L
Sbjct: 319 -GLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSL 377
Query: 121 V 121
+
Sbjct: 378 L 378
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSH 117
D++T L+ G G ALE+F M G+ P+ T G L AC
Sbjct: 463 DIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQ 511
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 153/394 (38%), Positives = 225/394 (57%), Gaps = 50/394 (12%)
Query: 9 EALLLFREV--QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------------ 54
+AL LF E+ + G+ + T+ +L+AC HL A+ +G +H Y+++
Sbjct: 497 DALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVA 556
Query: 55 --------KNIEVDVGL----GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVK 102
K +VD M+ K ++ T+++ M G+G++AL+ F +M+ G
Sbjct: 557 NCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFV 616
Query: 103 PDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE 162
PD ITF+ VL ACSH G+VD+ +S+F+ MS YG+ P EHY C + +L R+GR+ KA
Sbjct: 617 PDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWR 676
Query: 163 LIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRK 222
+K+MPM V LL ACR+H N+E AE A +L+E+ +N GSY ++SN Y+++ +
Sbjct: 677 TVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGR 736
Query: 223 WKKVKRIRELMAERNIKKPPGCILIE------------------------VDGVVHEFVK 258
WK V RIR LM + IKK PGC ++ ++ ++
Sbjct: 737 WKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKA 796
Query: 259 AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTA 318
G+VP + L D+DEEEK L H+EKLA+ +GL++ PG IRI KNLRVC DCH+A
Sbjct: 797 MGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSA 856
Query: 319 TNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISK+ + E VV D +RFHHFKNGSCSC +W
Sbjct: 857 FTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 890
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 43/207 (20%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN-IEV 59
Y + EAL LFR++ G + VT++S+L AC LGA G +H Y +K + +
Sbjct: 376 YSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTL 435
Query: 60 DVGLGMALKDVMTLTALIVVLAMC---------------------------------GQG 86
D G +D+M ALI + + C G
Sbjct: 436 DNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDS 495
Query: 87 NKALEYFYEM--QIRGVKPDAITFVGVLVACSH--AGLVDERISHFNLMSEKYGIRPSIE 142
N AL+ F EM + GV P+A T +L+AC+H A + ++I + L +Y S
Sbjct: 496 NDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRY---ESSA 552
Query: 143 HY--GCLVYILGRAGRIAKAEELIKNM 167
++ CL+ + + G + A + +M
Sbjct: 553 YFVANCLIDMYSKCGDVDTARHVFDSM 579
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 217/398 (54%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + L ++ +G D+VT++S+L AC L ALE G +H +K +E D
Sbjct: 493 YAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESD 552
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +L +D + A++ G G +A++ F M
Sbjct: 553 TVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLK 612
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V P+ ITF V+ AC AGLV E F +M E + ++P +HYGC+V +LGRAGR+
Sbjct: 613 ERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQ 672
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AEE I+ MP D V LLGAC+ HDN++ AE AA +L L P N YV LSN Y+
Sbjct: 673 EAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYA 732
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ +W ++R++M ++ +KK G IE+DG +H FV
Sbjct: 733 QAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTK 792
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+ P+ VL D+DE +KE AL H+EKLAI +GL+ PG IRI+KNLRVC D
Sbjct: 793 EMKEAGYTPDMRFVLHDVDEVQKERALCHHSEKLAIAYGLLKTPPGTPIRIMKNLRVCGD 852
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTAT ISK+ RE V D NRFH+FKNG+CSC DFW
Sbjct: 853 CHTATKFISKIRKREIVARDANRFHYFKNGTCSCGDFW 890
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 148/358 (41%), Gaps = 64/358 (17%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EA L+ ++ G++ + VT VSLL +C AL G +H +I ++ +E DV + AL
Sbjct: 263 EAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALI 322
Query: 68 ---------------------KDVMTLTALIVVLAMCG-QGNKALEYFYE----MQIRGV 101
+DV++ +A+I A G Q ++L+ ++ M+ GV
Sbjct: 323 TMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGV 382
Query: 102 KPDAITFVGVLVACS-HAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA 160
P+ +TF+ +L ACS H L R H + K G + + + G I +A
Sbjct: 383 FPNKVTFMSILKACSVHGALEQGRQIHAEI--SKVGFESDRSLQTAIFNMYAKCGSIYEA 440
Query: 161 EELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSS 220
E++ M + LL +L +AE+ E+ N S+ ++ Y+ S
Sbjct: 441 EQVFSKMENK-NVVAWASLLTMYIKCGDLTSAEKV---FSEMSTRNVVSWNLMIAGYAQS 496
Query: 221 RKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFDMDEEEKETA 280
+ ++ EL++ ++ GF P++ ++ ++ +A
Sbjct: 497 ---GDIAKVFELLSSMKVE--------------------GFQPDRVTIISILEACGALSA 533
Query: 281 LN----LHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMD 334
L +H E A+ GL S V +I C + A + K+ NR+TV +
Sbjct: 534 LERGKLVHAE--AVKLGLESDTV-VATSLIGMYSKCGEVTEARTVFDKISNRDTVAWN 588
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 113/255 (44%), Gaps = 25/255 (9%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG--- 64
+EA+ L ++ +GL + T ++ C L E G +H + + + +D+ LG
Sbjct: 60 KEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSL 119
Query: 65 -------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
M L+DV+T +++I A KA + F M+ ++P+
Sbjct: 120 INFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNR 179
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
ITF+ +L AC++ ++ E+ + + + G+ + L+ + + G I+ A E+ +
Sbjct: 180 ITFLSILKACNNYSML-EKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQ 238
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLEL-LPDNGGSYVILSNRYSSSRKWK 224
M + ++ A H L A +++L+ + N ++V L N ++
Sbjct: 239 KMK-ERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALN 297
Query: 225 KVKRIRELMAERNIK 239
+ +RI ++ER ++
Sbjct: 298 RGRRIHSHISERGLE 312
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 22/138 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +A F ++ + +++T +S+L AC + LE +H + +E D
Sbjct: 154 YAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETD 213
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL ++V++ TA+I A + N+A E + +M
Sbjct: 214 VAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQ 273
Query: 99 RGVKPDAITFVGVLVACS 116
G+ P+A+TFV +L +C+
Sbjct: 274 AGISPNAVTFVSLLNSCN 291
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + +E L ++ +G+ +KVT +S+L AC+ GALE G +H I K E D
Sbjct: 361 YQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESD 420
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
L TA+ + A CG +A + F +M+ + V + + +L G
Sbjct: 421 RSLQ---------TAIFNMYAKCGSIYEAEQVFSKMENKNV----VAWASLLTMYIKCGD 467
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPM---ALDHFVLG 177
+ F+ MS + ++ + ++ ++G IAK EL+ +M + D +
Sbjct: 468 LTSAEKVFSEMSTR-----NVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTII 522
Query: 178 GLLGACRIHDNLE 190
+L AC LE
Sbjct: 523 SILEACGALSALE 535
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 164/385 (42%), Positives = 225/385 (58%), Gaps = 47/385 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LFR++Q G+ D+VTMVS++ AC GAL+ G W+H YI K+ IE D+ L AL
Sbjct: 245 EALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQLIETDLELSTALV 304
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
KD +++IV LA+ G ALE F+ M+ VKP+ +
Sbjct: 305 NMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHV 364
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF+GVL AC+H+GLV E +++ M E +GI PS+E YGC+V +L RA + A L++
Sbjct: 365 TFIGVLSACAHSGLVSEGRRYWSSMLE-FGIVPSMELYGCMVDLLCRASLVEDACTLVET 423
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP++ + + LL C+ NL+ +E AQ+LLEL P N +Y++LSN Y+S +W+K+
Sbjct: 424 MPISPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLELEPHNAENYILLSNLYASMSQWEKM 483
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGFV 262
++R+ M IK PGC IEVDG+VHEFV G
Sbjct: 484 SQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHPEAMEVREILRDISKRVHAVGHQ 543
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P S+VL ++ +EEKE AL H+E+LAI +GL+ + IRI+KNLRVC DCH T II
Sbjct: 544 PGISDVLHNVVDEEKENALCEHSERLAIAYGLLKTKTPMAIRIVKNLRVCGDCHEVTKII 603
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCS 347
S Y RE +V DR RFH F NGSCS
Sbjct: 604 SAEYRREIIVRDRVRFHKFVNGSCS 628
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 26/190 (13%)
Query: 4 DSACEEALLLFREVQHKGLTG-DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVG 62
+ +E ++LFR++ +G + TM +L AC+ + ALE G +H ++K
Sbjct: 138 QTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHANVLKSGFGSSPF 197
Query: 63 LGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG 100
+ AL ++++ + +I A G N+AL F +MQ G
Sbjct: 198 VETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAG 257
Query: 101 VKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
V PD +T V V+ AC+ +G +D + H + K I +E LV + + G I +
Sbjct: 258 VVPDEVTMVSVISACAASGALDTGKWVHAYI--NKQLIETDLELSTALVNMYAKCGCIER 315
Query: 160 AEELIKNMPM 169
A+E+ MP+
Sbjct: 316 AKEVFDAMPV 325
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 155/391 (39%), Positives = 232/391 (59%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGLTG-DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV------ 61
E L+L ++ +G ++ T+V++L ACTHLG+ ++G +H +++ E++V
Sbjct: 182 ECLMLLGKMSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSL 241
Query: 62 ------------GL----GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
GL M+ K+ + T +I LA+ G+G +AL+ F EM G+ PD
Sbjct: 242 IDMYVKSGCLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDD 301
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+ +VGV ACSHAGLV+E + F M ++ I P+++HYGC+V +LGR G + +A ELIK
Sbjct: 302 VVYVGVFSACSHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIK 361
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+M + + + LL AC++H NLE + AA+ L L +N G Y++L+N Y+ ++KW
Sbjct: 362 SMSIKPNDVIWRSLLSACKVHHNLEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDD 421
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GF 261
V +IR +AERN+ + PG LIE V++FV G+
Sbjct: 422 VAKIRTKLAERNLVQTPGFSLIEAKRKVYKFVSQDKSIPQWNIIYEMIHQMEWQLKFEGY 481
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
+P+ S+VL D+D+EEK+ L H++KLAI FGL+ G +RI +NLR+C+DCHT T
Sbjct: 482 IPDTSQVLLDVDDEEKKERLKFHSQKLAIAFGLIHTSEGSPLRITRNLRMCSDCHTYTKY 541
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS +Y RE V DR RFHHFKNGSCSCKD+W
Sbjct: 542 ISMIYEREITVRDRLRFHHFKNGSCSCKDYW 572
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 47/240 (19%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V D EEALLL+ ++ +G+ DK T +L AC+ LG ++ G+ +H ++ K +E DV
Sbjct: 74 VNDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEGIQVHGHVFKMGLEGDV 133
Query: 62 GL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ GM K V + +A+I A N+ L +M
Sbjct: 134 IVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGKMSSE 193
Query: 100 G-VKPDAITFVGVLVACSHAGLVD----------ERISHFNLMSEKYGIRPSIEHYGCLV 148
G + + T V VL AC+H G D IS N++ ++ S L+
Sbjct: 194 GRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVV-----VKTS------LI 242
Query: 149 YILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE--LLPDN 206
+ ++G + K + KNM + + ++ IH + A + +++E L PD+
Sbjct: 243 DMYVKSGCLEKGLRVFKNMSEK-NRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDD 301
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 153/394 (38%), Positives = 225/394 (57%), Gaps = 50/394 (12%)
Query: 9 EALLLFREV--QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------------ 54
+AL LF E+ + G+ + T+ +L+AC HL A+ +G +H Y+++
Sbjct: 504 DALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVA 563
Query: 55 --------KNIEVDVGL----GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVK 102
K +VD M+ K ++ T+++ M G+G++AL+ F +M+ G
Sbjct: 564 NCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFV 623
Query: 103 PDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE 162
PD ITF+ VL ACSH G+VD+ +S+F+ MS YG+ P EHY C + +L R+GR+ KA
Sbjct: 624 PDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWR 683
Query: 163 LIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRK 222
+K+MPM V LL ACR+H N+E AE A +L+E+ +N GSY ++SN Y+++ +
Sbjct: 684 TVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGR 743
Query: 223 WKKVKRIRELMAERNIKKPPGCILIE------------------------VDGVVHEFVK 258
WK V RIR LM + IKK PGC ++ ++ ++
Sbjct: 744 WKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKA 803
Query: 259 AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTA 318
G+VP + L D+DEEEK L H+EKLA+ +GL++ PG IRI KNLRVC DCH+A
Sbjct: 804 MGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSA 863
Query: 319 TNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISK+ + E VV D +RFHHFKNGSCSC +W
Sbjct: 864 FTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 897
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 43/207 (20%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN-IEV 59
Y + EAL LFR++ G + VT++S+L AC LGA G +H Y +K + +
Sbjct: 383 YSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTL 442
Query: 60 DVGLGMALKDVMTLTALIVVLAMC---------------------------------GQG 86
D G +D+M ALI + + C G
Sbjct: 443 DNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDS 502
Query: 87 NKALEYFYEM--QIRGVKPDAITFVGVLVACSH--AGLVDERISHFNLMSEKYGIRPSIE 142
N AL+ F EM + GV P+A T +L+AC+H A + ++I + L +Y S
Sbjct: 503 NDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRY---ESSA 559
Query: 143 HY--GCLVYILGRAGRIAKAEELIKNM 167
++ CL+ + + G + A + +M
Sbjct: 560 YFVANCLIDMYSKCGDVDTARHVFDSM 586
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 153/396 (38%), Positives = 224/396 (56%), Gaps = 46/396 (11%)
Query: 3 EDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIM--------- 53
ED EE LLFR++ G+ ++ T +L AC A +G +H Y+M
Sbjct: 298 EDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSF 357
Query: 54 -------------KKNIEVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG 100
+ V M D+++ T+LIV A GQ ++AL +F + G
Sbjct: 358 AISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSG 417
Query: 101 VKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA 160
KPD +T+VGVL AC+HAGLVD+ + +F+ + EK+G+ + +HY C++ +L R+GR +A
Sbjct: 418 TKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEA 477
Query: 161 EELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSS 220
E +I NMP+ D F+ LLG CRIH NLE A+RAA+ L E+ P+N +Y+ L+N Y+++
Sbjct: 478 ENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENPATYITLANIYANA 537
Query: 221 RKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV----------------------- 257
W +V +R+ M I K PG IE+ VH F+
Sbjct: 538 GLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKI 597
Query: 258 -KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCH 316
+ G+VP+ + VL D++EE+KE L H+EKLA+ FG++S PG I++ KNLR C DCH
Sbjct: 598 KEEGYVPDTNFVLHDVEEEQKEQNLVYHSEKLAVVFGIISTPPGTPIKVFKNLRTCVDCH 657
Query: 317 TATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
TA ISK+ R+ V D NRFH F++GSCSCKD+W
Sbjct: 658 TAIKYISKIVQRKITVRDSNRFHCFEDGSCSCKDYW 693
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 26/191 (13%)
Query: 1 YVEDSACEEALLLFREVQ-HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
YV + EAL LFR +Q H+ + +K T+ S L A + L +G +H Y+++ + +
Sbjct: 194 YVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNL 253
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
D + AL +DV++ T +I G+ + F ++
Sbjct: 254 DEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLM 313
Query: 98 IRGVKPDAITFVGVLVACS-HAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
GV+P+ TF GVL AC+ HA + H +M Y P LV++ + G
Sbjct: 314 QSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYD--PGSFAISALVHMYSKCGN 371
Query: 157 IAKAEELIKNM 167
A + M
Sbjct: 372 TRVARRVFNEM 382
>gi|357464871|ref|XP_003602717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491765|gb|AES72968.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 554
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 156/401 (38%), Positives = 232/401 (57%), Gaps = 50/401 (12%)
Query: 2 VEDSACEEALLLFREVQ--HKGLTG--DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI 57
V+++ EAL +F+++Q H+ + D+ M+S++ A + LG +E+G+W+H +I++ I
Sbjct: 154 VKNNLPAEALSVFQQMQMGHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGI 213
Query: 58 EVDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYE 95
+ V LG AL ++V+T TALI LA+ G+ +AL+ FYE
Sbjct: 214 VMTVPLGTALINMYSRCGLIDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYE 273
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
M+ G+KPD F+GVLVACSH GLV++ F M +++GI+P +EHYGC+V +LGRAG
Sbjct: 274 MKESGLKPDGALFIGVLVACSHGGLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAG 333
Query: 156 RIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSN 215
I +A + ++ MP+ + + LLGAC H++L AE+A ++++EL P + G YV+LSN
Sbjct: 334 LILEAFDFVEEMPLKPNSVIWRTLLGACVNHNHLGLAEKARERIIELDPYHDGDYVLLSN 393
Query: 216 RYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK----------------- 258
Y W +R M + I K PG + +D VVHEFV
Sbjct: 394 AYGRVGNWGGKAGLRNSMKQNRIVKEPGLSFVHIDQVVHEFVSGDHVHPQWEEITKFLAS 453
Query: 259 -------AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
G+ PN S VL D+ +EEKE L H+EKLA+ F L+ IR+IKNLR+
Sbjct: 454 IIDTVKLGGYTPNTSSVLHDIQDEEKEHCLGYHSEKLAVAFVLLYHRDRRTIRVIKNLRI 513
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH S +++R+ ++ DRNRFHHF G CSC+DFW
Sbjct: 514 CYDCHDFMKHASGIFDRDIIIRDRNRFHHFSKGLCSCQDFW 554
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 156/400 (39%), Positives = 226/400 (56%), Gaps = 52/400 (13%)
Query: 5 SACEE------ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
SAC + AL L RE+ + + VTMVS L AC+ L AL G +H +I++ ++
Sbjct: 330 SACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLD 389
Query: 59 V----------------------DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+ M +D+++ +I V M G G A+ F +
Sbjct: 390 TCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQF 449
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ G+KP+ ITF +L ACSH+GL++E +F +M +Y + P++E Y C+V +L RAG+
Sbjct: 450 RTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQ 509
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ E I+ MP + V G LLGACRIH N + AE AA+ L EL P + G+YV+++N
Sbjct: 510 FNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANI 569
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
YS++ +W+ +IR LM ER + KPPGC IEV +H FV
Sbjct: 570 YSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESL 629
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+ G+VP+ + VL D+DE+EKE +L H+EK+A+ FGL+S G +RIIKNLRVC
Sbjct: 630 YFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVC 689
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+AT ISKV R+ ++ D RFHHF +G CSC D+W
Sbjct: 690 GDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 729
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 31/150 (20%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK-KNIEV 59
Y ++AL +FR++ +G+ + +T+ S + ACT+L L G +H Y +K + ++
Sbjct: 187 YTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDS 246
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMC--GQGNKALEYFYE 95
D+ +G +L D+++ A++ V G G ALE+F
Sbjct: 247 DLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQR 306
Query: 96 MQIRG------VKPDAITFVGVLVACSHAG 119
M I D + + ++ AC+ +G
Sbjct: 307 MHIACSVFSELSTRDVVVWNSIISACAQSG 336
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 22/136 (16%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE--------- 58
EE + LF + ++G+ D + AC+ L VG ++ Y++ E
Sbjct: 93 EETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSI 152
Query: 59 ---------VDVGL----GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+D+ + KDV ++ G+ KAL F +M + GVKP++
Sbjct: 153 LDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNS 212
Query: 106 ITFVGVLVACSHAGLV 121
IT + AC++ L+
Sbjct: 213 ITIASAVSACTNLSLL 228
>gi|218185168|gb|EEC67595.1| hypothetical protein OsI_34962 [Oryza sativa Indica Group]
Length = 838
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 148/394 (37%), Positives = 225/394 (57%), Gaps = 46/394 (11%)
Query: 5 SACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG 64
SA + L +F + + +++T+V+++ AC LGA+ G+W H Y +K+ + V+ +
Sbjct: 445 SAADAILEMFVRMLSLAIKPNEITLVAVIGACGELGAVSHGVWAHTYAVKRRLAVNCIVA 504
Query: 65 MAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVK 102
AL +D A++ LA+ G G AL F M GV
Sbjct: 505 TALVEMYAGCGRLDLAEQVFAAASDRDTRCYNAMLHGLAVHGHGRAALSLFDRMHGEGVP 564
Query: 103 PDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE 162
D +T + V+ AC+HAGLVDE + +F+ M ++GI PSIEHYGC+V +L RAGR+ AE+
Sbjct: 565 VDGVTVLSVMCACAHAGLVDEGLDYFDRMEIEFGIEPSIEHYGCMVDMLSRAGRLNDAEK 624
Query: 163 LIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRK 222
LI MP+ + + L+ AC IH LE ++ +L+ L PD+ G++V++SN Y+++ +
Sbjct: 625 LIHGMPIVPNAAIYRSLIRACGIHGKLELGKKMIAELMRLEPDDSGNHVLISNFYATTNR 684
Query: 223 WKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------K 258
W K+ R+ M I K PG ++++GV+HEF+ +
Sbjct: 685 WDDAKKARKEMKSMGIDKSPGSSFVDINGVLHEFLVGDKTHPASKEIYAMVEDIETRLSE 744
Query: 259 AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTA 318
G + S LFD++EE+K AL+ H+E+LAI F L++ PG IRIIKNLRVC DCH +
Sbjct: 745 CGHRSSTSSALFDVEEEDKADALSYHSERLAIAFALIASNPGAPIRIIKNLRVCADCHES 804
Query: 319 TNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
++S+VY RE V+ DR RFHHF++G CSC DFW
Sbjct: 805 AKLVSRVYGREIVMRDRTRFHHFRDGVCSCGDFW 838
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 153/390 (39%), Positives = 218/390 (55%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EA+ FRE+Q +G + VT+ +L A ++ AL G H + ++K DV + AL
Sbjct: 276 EAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALV 335
Query: 69 D----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
D V++ A+I AM G+ A+ F+ M KPD +
Sbjct: 336 DMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMV 395
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF +L AC+ AGL +E +F M +YG+ P +EHY C+V +LGRAG++ +A +LI +
Sbjct: 396 TFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISD 455
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP D ++ G LLG+CR+H N++ AE AA++L L P+N G+YV+LSN Y+S + W +V
Sbjct: 456 MPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAGNYVLLSNIYASKKMWDRV 515
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVH------------------------EFVKAGFV 262
R+RE+M + +KK GC IE+ VH + K GFV
Sbjct: 516 NRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAGDDSHPMMTAIIEKINQLNIQMRKLGFV 575
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ VL D++E+EK+ L +H+EKLA+ GL+S PG +R+IKNLR+C DCH A I
Sbjct: 576 PSTDFVLHDVEEQEKDDILAVHSEKLAVALGLISTSPGTTLRVIKNLRICGDCHEAMKFI 635
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S RE V D NRFHHF G CSC DFW
Sbjct: 636 SSFEGREISVRDTNRFHHFSGGKCSCGDFW 665
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSH-AGLVDERISH 127
+V++ T+++ G+ +A+E+F EMQ +G +P+++T VL A ++ A L+ R +H
Sbjct: 257 NVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAH 316
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ + G + LV + + GR+ A + M
Sbjct: 317 --CFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTM 354
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 64/163 (39%), Gaps = 24/163 (14%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLL-ACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+A++ + +GL T VS L A +G + VG LH Y +K D + AL
Sbjct: 139 DAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTAL 198
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
DV + ALI L+ Q +AL F E RGV+ +
Sbjct: 199 IDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNV 258
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLV 148
+++ ++ C G E + F M + G P+ C++
Sbjct: 259 VSWTSIVACCVQNGKDLEAVEFFREMQAQ-GTEPNSVTIPCVL 300
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 163/399 (40%), Positives = 231/399 (57%), Gaps = 48/399 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHP-----YIMKK 55
YV+ EAL L +++ +G+ D +T++ ++ AC+ L + ++ +H + +
Sbjct: 184 YVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGFFYNQ 243
Query: 56 NIEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ V+ L GM ++++T +A+I M G G +AL F +M+
Sbjct: 244 LLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQMK 303
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
VKPD ITFV +L ACSH+GLV E FN M+ +G+ P EHY C+V ILGRAG++
Sbjct: 304 A-SVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKL 362
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A + I+ MP+ + V G LLGACRIH N++ AE A+ L +L P N G YVIL N Y
Sbjct: 363 DEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYVILYNIY 422
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ + K K+ IR LM R +KK G +IE+ ++ FV
Sbjct: 423 TLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIYSELERLM 482
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ G+ P+ + VL D+DEE KE+ L LH+EKLAI FGL++ PG +IRI KNLRVC
Sbjct: 483 DRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSVIRIRKNLRVCG 542
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTAT ISKV RE VV D +RFHHFKNG+CSC+D+W
Sbjct: 543 DCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 13/109 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEA ++R V GL D+ + G +EV L IM K
Sbjct: 125 EEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSK------------ 172
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACS 116
D++T I +AL +M ++G+ PDAIT +GV+ ACS
Sbjct: 173 -DLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACS 220
>gi|242081563|ref|XP_002445550.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
gi|241941900|gb|EES15045.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
Length = 595
Score = 290 bits (741), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 222/394 (56%), Gaps = 49/394 (12%)
Query: 8 EEALLLFREVQHK--GLTGDKVTMVSLLLACTHLGALEVG--MWL----HPYIMKKNIE- 58
++AL LF E++ + G D VT + LL ACT LGAL+ G +W H Y K +
Sbjct: 202 KDALKLFEEMRGRDSGAEPDDVTCILLLQACTSLGALDFGEQVWAYAEEHGYGAKLKVRN 261
Query: 59 -----------VD----VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
VD V G K V+T +A+I LA G G+ A+ F EM V P
Sbjct: 262 SLIAMYSRCGCVDKAYRVFCGTPQKSVVTWSAMISGLAANGFGDDAISAFEEMIRSDVAP 321
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
D TF GVL ACSH+GLVDE F++M +YG++P++ HYGC+V ++GRAG + +A EL
Sbjct: 322 DEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYEL 381
Query: 164 IKN-MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRK 222
+ N M +A D + LLGACRIH +++ ER L+EL G YV+L N Y++ +
Sbjct: 382 VTNEMKVAPDATIWRTLLGACRIHGHVDLGERVISNLIELKAQQAGDYVLLLNTYAAVGE 441
Query: 223 WKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------------ 258
W KV +R+LM E+ I+ PGC +E +G V+EF+
Sbjct: 442 WSKVSEVRKLMQEKGIQTTPGCTTVEHNGEVYEFIADDDAHPRKVEIYEKLNEINKQLRI 501
Query: 259 AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTA 318
AG+VPN S L D+D E KE+AL H+EKLAI F L+ IR+ KNLRVC DCH
Sbjct: 502 AGYVPNVSSELHDLDSEGKESALTYHSEKLAIAFALLVTPQNRPIRLAKNLRVCVDCHNF 561
Query: 319 TNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
T + S +YNR +V DR RFHHF+ G CSC D+W
Sbjct: 562 TKVFSGIYNRLVIVRDRTRFHHFQGGKCSCNDYW 595
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 153/390 (39%), Positives = 218/390 (55%), Gaps = 47/390 (12%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-- 67
A+ LF E+Q + D V +VS+L+A L +L G +H +++++N ++ + +L
Sbjct: 552 AVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVD 611
Query: 68 --------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
KDV+ TA+I M G G +A++ F M G+ PD ++
Sbjct: 612 MYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVS 671
Query: 108 FVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
F+ +L ACSH+ LV+E + ++M KY ++P EHY C+V ILGR+G+ +A E IK M
Sbjct: 672 FLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTM 731
Query: 168 PMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVK 227
PM V LLGACR+H N A AA +LLEL PDN G+Y+++SN ++ KW K
Sbjct: 732 PMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAK 791
Query: 228 RIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------------KAGFV 262
R MAER ++K P C IE+ +H F + G+V
Sbjct: 792 ETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRREGGYV 851
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
+ VL D EEEK L+ H+E++AI FGL+S PG+ IRI KNLRVC DCH T ++
Sbjct: 852 EDTRFVLHDTSEEEKIDMLHKHSERIAIAFGLISTRPGMPIRIAKNLRVCGDCHEFTKLV 911
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SK++ R+ VV D NRFHHF GSCSC+DFW
Sbjct: 912 SKLFERDIVVRDANRFHHFSGGSCSCEDFW 941
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 22/137 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++S EA+ F E+ G D +VSL A HL L G H Y +K+ + D
Sbjct: 342 YVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTD 401
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G M ++D ++ T ++ A + ++ALE E+Q
Sbjct: 402 LQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQK 461
Query: 99 RGVKPDAITFVGVLVAC 115
G+ D++ +L C
Sbjct: 462 EGIMVDSMMIGSILETC 478
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 18/158 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V++ EAL LFR +Q G + T V++L C LG L +G LH ++K E+++
Sbjct: 243 VQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNI 302
Query: 62 GLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLV 121
AL+V+ A G+ + AL F ++ + D I++ +L
Sbjct: 303 ----------QCNALLVMYAKYGRVDSALRVFGQI----AEKDYISWNSMLSCYVQNSFY 348
Query: 122 DERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
E I F M + +G +P + C+V + G +++
Sbjct: 349 AEAIDFFGEMLQ-HGFQPD---HACVVSLSSALGHLSR 382
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 21/135 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI--- 57
+ + S EAL + E+Q +G+ D + + S+L C L ++ + +H Y ++ +
Sbjct: 443 FAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGLLDL 502
Query: 58 --------------EVDVGLGM----ALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
E D L + KD+++ T++I G+ N A+ F EMQ
Sbjct: 503 ILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKA 562
Query: 100 GVKPDAITFVGVLVA 114
++PD++ V +LVA
Sbjct: 563 NIQPDSVALVSILVA 577
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/398 (37%), Positives = 219/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y +D E+A+ F ++Q +G+ ++ T+ S L C+ + L+ G LH +K D
Sbjct: 367 YAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGD 426
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL +D ++ +I + GQG KAL+ F M
Sbjct: 427 MFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLD 486
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G PD +TF+GVL ACSH GL++E HFN +S+ YGI P+IEHY C+V ILGRAG+
Sbjct: 487 EGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFH 546
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+ E I+ M + + + +LGAC++H N+E ERAA +L EL P+ +Y++LSN ++
Sbjct: 547 EVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFA 606
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ W V +R LM+ R +KK PGC +EV+G VH F+
Sbjct: 607 AKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQ 666
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ PN VL ++ + EK+ L H+E+LA+ F L+S IRI KNLR+C D
Sbjct: 667 KLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGD 726
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH IS++ N+E VV D N FHHFKNGSCSC++FW
Sbjct: 727 CHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 764
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 23/174 (13%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-- 67
L +F ++ +G + T +S+L +C+ L +++G +H I+K +++ + +G AL
Sbjct: 275 GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVD 334
Query: 68 --------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
+D+ T ++ A GQG KA++ F +MQ GVKP+ T
Sbjct: 335 MYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFT 394
Query: 108 FVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAE 161
L CS +D + M+ K G + LV + + G + AE
Sbjct: 395 LASSLSGCSRIATLDSG-RQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAE 447
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 54/152 (35%), Gaps = 39/152 (25%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + C++ + ++ +G + T +S+L C G L G +H ++K I D
Sbjct: 166 FCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPD 225
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKA------------------------------L 90
L +L+ V A CG N A L
Sbjct: 226 SHL---------WNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGL 276
Query: 91 EYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
F +M G P+ TF+ +L +CS VD
Sbjct: 277 RIFNQMLAEGFNPNMYTFISILRSCSSLSDVD 308
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 154/390 (39%), Positives = 217/390 (55%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EA+ LFRE+Q +G+ + VT+ +L A ++ AL G H + ++K D+ +G AL
Sbjct: 275 EAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALV 334
Query: 69 D----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
D V++ A+I AM G+ A+ F MQ KPD +
Sbjct: 335 DMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLV 394
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF VL ACS AG +E S+FN M K+GI P +EHY C+V +LGRAG++ A ++I
Sbjct: 395 TFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQ 454
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP D + G LLG+CR+H N+ AE AA+ L +L P+N G+YV+LSN Y+S + W V
Sbjct: 455 MPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGV 514
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVH------------------------EFVKAGFV 262
R+R++M +KK GC IE+ VH E + GF
Sbjct: 515 NRLRDMMKTVGLKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFA 574
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ VL D++E+EK+ L++H+EKLA+ GL+S G +++IKNLR+C DCH A I
Sbjct: 575 PSTDYVLHDVEEQEKDDILSVHSEKLAVALGLISTSHGTPLQVIKNLRICGDCHEAMKFI 634
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S RE V D NRFHHFK+G CSC D+W
Sbjct: 635 SSFERREIYVRDTNRFHHFKDGKCSCADYW 664
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSH-AG 119
VG G+ L +V++ T+++ G+ +A++ F EMQ G++P+++T VL A ++ A
Sbjct: 249 VGRGIEL-NVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAA 307
Query: 120 LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGL 179
L+ R +H S + G I LV + + GR+ A + + MP + +
Sbjct: 308 LMHGRSAH--CFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYR-NVVSWNAM 364
Query: 180 LGACRIHDNLEAAER 194
+G +H E A R
Sbjct: 365 IGGYAMHGEAENAVR 379
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 23/162 (14%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
+A+L + +G D + L A +G + VG LH Y++K +D + AL
Sbjct: 139 DAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALI 198
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
DV + AL+ L+ Q ++AL F E RG++ + +
Sbjct: 199 DMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVV 258
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLV 148
++ ++ C G E + F M + GI P+ C++
Sbjct: 259 SWTSIVACCVQNGRDLEAVDLFREMQSE-GIEPNSVTIPCVL 299
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/397 (37%), Positives = 226/397 (56%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV-- 59
++ E AL F ++ G+ D VT VS + +C+ L AL G +H +MK ++
Sbjct: 312 TQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVV 371
Query: 60 --------------------DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
V G D L+A+I G G KA+E F +M
Sbjct: 372 PVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNG 431
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G +P +TF+ +L ACSH+GL +E + F LM++ YG++PS++HY C+V +LGR+G + +
Sbjct: 432 GAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDE 491
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
AE LI +MP+ D + LL AC+ N + AER A++++EL P + SYV+LSN ++
Sbjct: 492 AEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRAT 551
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
SR+W V +R+ M + N++K PG +E+ G +H+F
Sbjct: 552 SRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAK 611
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+ G+ P+ S VL DM++EEKE +L+ H+EKLAI F +S GV IR++KNLRVC+DC
Sbjct: 612 IRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDC 671
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H A ++S+V RE VV D +RFHHFK+G CSC+D+W
Sbjct: 672 HLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 708
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 31/225 (13%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EE+L F +++ +G+ D+ + S+ C L + G +H Y+++ ++ D+ +G +L
Sbjct: 217 EESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSL 276
Query: 68 K----------------------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+++ +I G ALEYF M+ GV D
Sbjct: 277 AHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADV 336
Query: 106 ITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+TFV + +CS A L + H +M K G+ + CLV++ R G + +E +
Sbjct: 337 VTFVSAISSCSDLAALAQGQQIHGQVM--KAGVDKVVPVMTCLVHMYSRCGCLGDSERVF 394
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGS 209
D F+L ++ A H + + A +Q++ NGG+
Sbjct: 395 FGY-CGSDTFLLSAMISAYGFHGHGQKAIELFKQMM-----NGGA 433
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 155/401 (38%), Positives = 227/401 (56%), Gaps = 49/401 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI--E 58
Y +++ EAL +F +Q G+ D+VT+V ++ AC LGA + W+ +
Sbjct: 247 YAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPT 306
Query: 59 VDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+V +G AL ++V + +++IV AM G A+E F EM
Sbjct: 307 SNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEM 366
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+KP+ +TF+GVL ACSHAG+V++ F +M E +G+ PS +HY C+V +LGRAGR
Sbjct: 367 LKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGR 426
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A L+K MPM V G LLGACRIH N + A+ AA L EL P+ G+Y++LSN
Sbjct: 427 LEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAASHLFELEPNGIGNYILLSNI 486
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIE-VDGVVHEFVKA---------------- 259
Y+S+ +W V ++R+LM + +KK PGC +E G++HEF
Sbjct: 487 YASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQALED 546
Query: 260 --------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
G+ PN S V +D+ +EEK+ L H+EKLA+ FGL++ G IRI+KNLR+
Sbjct: 547 LLDRLKYLGYQPNLSSVAYDISDEEKKRLLMSHSEKLALAFGLLTTNAGCTIRIVKNLRI 606
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH+ S++ RE VV D RFHHF++G CSC +FW
Sbjct: 607 CEDCHSVMCGASQITGREIVVRDNMRFHHFRDGRCSCGNFW 647
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 16/148 (10%)
Query: 22 LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKDVMTLTALIVVLA 81
L D ++ SL++A +G +E L G+ +KD++ TA++ A
Sbjct: 202 LDRDVISWTSLIVAYAKVGNMEAASELFD-------------GLPMKDMVAWTAMVTGYA 248
Query: 82 MCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPS- 140
+ +ALE F MQ GVK D +T VGV+ AC+ G + + ++E+ G P+
Sbjct: 249 QNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAA-KYANWVRDVAEQSGFGPTS 307
Query: 141 -IEHYGCLVYILGRAGRIAKAEELIKNM 167
+ L+ + + G + A ++ + M
Sbjct: 308 NVVVGSALIDMYAKCGSVEDAYKVFERM 335
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 155/398 (38%), Positives = 229/398 (57%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YVE+ EEA F ++ + D VT ++LL AC HLGAL++GM ++ +K ++
Sbjct: 440 YVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSH 499
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL +DV+T +I ++ G +AL+ F M
Sbjct: 500 IPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLK 559
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+P+++TFVGVL ACS AG V+E F+ + + GI P++E YGC+V +LGRAG +
Sbjct: 560 ERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELD 619
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE LI MP+ + + LL ACRI+ NL+ AERAA++ L P +G YV LS+ Y+
Sbjct: 620 EAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYA 679
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ W+ V ++R++M R ++K GC IEV+G +H FV
Sbjct: 680 AAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMT 739
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G++P VL ++ E+EKE A++ H+EKLAI +G++S G IRI KNLRVC D
Sbjct: 740 AIKREGYIPVTQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGD 799
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A+ ISKV RE + D +RFHHFKNG CSC D+W
Sbjct: 800 CHSASKFISKVTGREIIARDASRFHHFKNGVCSCGDYW 837
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 107/234 (45%), Gaps = 25/234 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----KN 56
Y E+S E+A LF +Q +G+ D++T + ++ AC L + +H +++ +
Sbjct: 339 YAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTD 398
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ VD L M+ +DV++ +A+I G G +A E F+ M+
Sbjct: 399 LLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKR 458
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V+PD +T++ +L AC H G +D + + + K + I L+ + + G I
Sbjct: 459 NNVEPDVVTYINLLNACGHLGALDLGMEIYT-QAIKADLVSHIPVGNALINMNVKHGSIE 517
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNL-EAAERAAQQLLELLPDNGGSYV 211
+A + +NM + D ++G +H N EA + + L E N ++V
Sbjct: 518 RARYIFENM-VQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFV 570
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 22/138 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EA LFR++ + + +T + +L AC+ L++G H ++K D
Sbjct: 137 YAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSD 196
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL +DV T +I A G G KA + FY MQ
Sbjct: 197 FRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQ 256
Query: 99 RGVKPDAITFVGVLVACS 116
G KP+ I+F+ +L CS
Sbjct: 257 EGFKPNRISFLSILDGCS 274
>gi|356524110|ref|XP_003530675.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Glycine max]
Length = 611
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 158/406 (38%), Positives = 231/406 (56%), Gaps = 55/406 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y + + AL +F E+Q + D TM S++ AC LGAL +G+W+H YI+KK
Sbjct: 207 YAKGGIFDTALRMFGEMQ-RVHDPDGYTMQSVISACAGLGALSLGLWVHAYILKKCDKNM 265
Query: 56 --------------------NIEVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYE 95
I V MA +D+ ++I+ LAM G+ AL Y+
Sbjct: 266 VDDVLVNTCLVDMYCKSGELEIAKQVFESMAFRDLNAWNSMILGLAMHGEAKAALNYYVR 325
Query: 96 M-QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRA 154
M ++ + P++ITFVGVL AC+H G+VDE I HF++M+++Y + P +EHYGCLV + RA
Sbjct: 326 MVKVEKIVPNSITFVGVLSACNHRGMVDEGIVHFDMMTKEYNVEPRLEHYGCLVDLFARA 385
Query: 155 GRIAKAEELIKNMPMALDHFVLGGLLGAC-RIHDNLEAAERAAQQLLELLPD--NGGSYV 211
GRI +A L+ M + D + LL AC + + ++E +E A+Q+ E + G YV
Sbjct: 386 GRINEALNLVSEMSIKPDAVIWRSLLDACCKQYASVELSEEMAKQVFESEGSVCSSGVYV 445
Query: 212 ILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFD 271
+LS Y+S+ +W V +R+LM+E+ + K PGC +IE+DGVVHEF KSE ++
Sbjct: 446 LLSKVYASACRWNDVGLLRKLMSEKGVTKEPGCSIIEIDGVVHEFFAGDTTHPKSENIYK 505
Query: 272 MDEEEKE-------------------------TALNLHTEKLAITFGLVSPMPGVLIRII 306
+ E +E L LH+E+LAI FG+++ P V IR+
Sbjct: 506 VVTEIEEKLESIGYLPDYSGAPMVDEVNDGKLNTLRLHSERLAIAFGILNSKPDVPIRVF 565
Query: 307 KNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
KNLRVCNDCH T +IS++YN E +V DR RFHHFK+G+CSC D+W
Sbjct: 566 KNLRVCNDCHRVTKLISRIYNVEIIVRDRARFHHFKDGTCSCMDYW 611
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/399 (39%), Positives = 220/399 (55%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +EA+ LFR + G + T+ ++L AC L L G +H ++ E
Sbjct: 405 YEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQS 464
Query: 61 VGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
V + A+ K+ +T T++IV LA G G +A+ F EM
Sbjct: 465 VSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEML 524
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GVKPD +T++GV AC+HAG +D+ ++ M ++GI P + HY C+V +L RAG +
Sbjct: 525 RVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLL 584
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A E I+ MP+A D V G LL ACR+ N + AE AA++LL + PDN G+Y L+N Y
Sbjct: 585 TEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSALANVY 644
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVH----------------------- 254
S+ +W RI +L ++ +KK G V VH
Sbjct: 645 SACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAICKKAAEMW 704
Query: 255 -EFVKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
E KAGFVP+ + VL D+D+E KE L+ H+EKLAI FGL+S +RI+KNLRVCN
Sbjct: 705 EEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCN 764
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTA ISKV +RE +V D RFHHF++G CSCKD+W
Sbjct: 765 DCHTAIKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 153/391 (39%), Positives = 220/391 (56%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LF +Q +G+ + +++S+L C L +L+ G +H ++K + DV + L
Sbjct: 313 EALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLI 372
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
KD++ ++I A G +AL+ F+EM G+ D +
Sbjct: 373 TMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGV 432
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFVGVL ACS+ G V E + F M KY + P EHY C+V +LGRAG + A +LI+
Sbjct: 433 TFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQK 492
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP+ D + G LLGACR H N+ AE AA++LL+L P N G Y++LSN Y+S +W V
Sbjct: 493 MPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDV 552
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------------KAGF 261
+R M + + K PGC IEV+ VH F +AG+
Sbjct: 553 AELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLEKLDGMLREAGY 612
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P+ S VL D+DEEEK +L H+E+LA+ FGL+ G+ IR++KNLRVC DCH+A +
Sbjct: 613 YPDSSFVLHDVDEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDCHSAIKL 672
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
I+K+ RE ++ D NRFHHFK+G CSC+D+W
Sbjct: 673 IAKITGREIILRDANRFHHFKDGFCSCRDYW 703
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/397 (37%), Positives = 226/397 (56%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV-- 59
++ E AL F ++ G+ D VT VS + +C+ L AL G +H +MK ++
Sbjct: 250 TQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVV 309
Query: 60 --------------------DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
V G D L+A+I G G KA+E F +M
Sbjct: 310 PVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNG 369
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G +P +TF+ +L ACSH+GL +E + F LM++ YG++PS++HY C+V +LGR+G + +
Sbjct: 370 GAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDE 429
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
AE LI +MP+ D + LL AC+ N + AER A++++EL P + SYV+LSN ++
Sbjct: 430 AEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRAT 489
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
SR+W V +R+ M + N++K PG +E+ G +H+F
Sbjct: 490 SRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAK 549
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+ G+ P+ S VL DM++EEKE +L+ H+EKLAI F +S GV IR++KNLRVC+DC
Sbjct: 550 IRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDC 609
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H A ++S+V RE VV D +RFHHFK+G CSC+D+W
Sbjct: 610 HLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 646
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 31/225 (13%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EE+L F +++ +G+ D+ + S+ C L + G +H Y+++ ++ D+ +G +L
Sbjct: 155 EESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSL 214
Query: 68 K----------------------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+++ +I G ALEYF M+ GV D
Sbjct: 215 AHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADV 274
Query: 106 ITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+TFV + +CS A L + H +M K G+ + CLV++ R G + +E +
Sbjct: 275 VTFVSAISSCSDLAALAQGQQIHGQVM--KAGVDKVVPVMTCLVHMYSRCGCLGDSERVF 332
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGS 209
D F+L ++ A H + + A +Q++ NGG+
Sbjct: 333 FGY-CGSDTFLLSAMISAYGFHGHGQKAIELFKQMM-----NGGA 371
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 152/399 (38%), Positives = 222/399 (55%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y EAL+LF E+Q + D V +VS+L A L +L G +H +++++N ++
Sbjct: 542 YANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHME 601
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +L KD++ TA+I M G G +A++ F M
Sbjct: 602 EAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQ 661
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV PD ++F+ +L ACSH+ LV+E + ++M Y + P EHY C+V +LGR+G+
Sbjct: 662 TGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTE 721
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E IK+MP+ V LLGACR+H N E A AA +LLEL PDN G+YV++SN ++
Sbjct: 722 EAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFA 781
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
KW K +R ++ER ++K P C IE+ VH F
Sbjct: 782 EMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITE 841
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ G+ + VL D+ EEEK L+ H+E+LAI+FGL++ PG+ +RI KNLRVC
Sbjct: 842 RLRKEGGYTEDTRSVLHDVSEEEKVDVLHRHSERLAISFGLINTRPGMPLRIAKNLRVCG 901
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH T ++SK+++R+ VV D NRFHHF GSCSC DFW
Sbjct: 902 DCHEFTKLVSKLFDRDIVVRDANRFHHFSGGSCSCGDFW 940
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 21/135 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------ 54
Y + S EAL +FRE Q +G+ D + + S+L AC+ L + + LH Y ++
Sbjct: 442 YAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLLDL 501
Query: 55 --KNIEVDV---------GLGM----ALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
KN +D+ L M KD++T T++I A G N+AL F EMQ
Sbjct: 502 VVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQST 561
Query: 100 GVKPDAITFVGVLVA 114
V+PD++ V +L A
Sbjct: 562 DVQPDSVALVSILGA 576
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 22/138 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ EA+ E+ G D +VSL A HLG L G +H Y +K+ ++ D
Sbjct: 341 YVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSD 400
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G M +KD ++ T +I A + +ALE F E Q
Sbjct: 401 TQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQK 460
Query: 99 RGVKPDAITFVGVLVACS 116
G+K D + +L ACS
Sbjct: 461 EGIKVDPMMIGSILEACS 478
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 18/150 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
+AL LFR +Q L+ + T V +L CT L L +G LH ++K EV++
Sbjct: 249 QALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNI------- 301
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHF 128
AL+V+ CG+ + AL F E+ + D I++ +L GL E I
Sbjct: 302 ---QCNALLVMYTKCGRVDSALRVFREID----EKDYISWNSMLSCYVQNGLYAEAIEFI 354
Query: 129 NLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ M + G +P + C+V + G +
Sbjct: 355 SEML-RGGFQPD---HACIVSLSSAVGHLG 380
>gi|302824741|ref|XP_002994011.1| hypothetical protein SELMODRAFT_137997 [Selaginella moellendorffii]
gi|300138173|gb|EFJ04951.1| hypothetical protein SELMODRAFT_137997 [Selaginella moellendorffii]
Length = 434
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 148/399 (37%), Positives = 225/399 (56%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ C+ AL LFR + ++G D VT V+ + AC L AL G LH +
Sbjct: 36 YAQNGHCKAALHLFRAMNNEGQRCDMVTFVAAIDACAGLSALVAGRSLHSIAAAAGLVAH 95
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + A+ K++++ + +I G ++AL+ F M +
Sbjct: 96 VEISTAIVNMYAKCGNLDDATIVFSSIRNKNLISWSTMITAFVQNGHTDRALDAFLAMNV 155
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PDA+TF +L ACSHAGL + HF+L+ +GI P+++H+ C+V +LGR+GR+
Sbjct: 156 DGLFPDAVTFKSILSACSHAGLFEHGFFHFDLLVHDFGITPTMDHFKCMVDLLGRSGRLL 215
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AEEL++ MP D LL ACR+H ++E +RAA+ LLEL + G YV+LSN ++
Sbjct: 216 EAEELVQTMPFVPDDVTWNTLLAACRVHKSVERGKRAAEVLLELTSEIPGYYVLLSNIHA 275
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
++ + ++R+LM R ++K PG IE++ HEF
Sbjct: 276 AAGDHAEKAKVRDLMEARGVRKKPGWSTIEINDRFHEFTAGEKFQHPKKQQILEELKRLS 335
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+VP+ +EVL ++E+EKE+ L H+EKLAI GL+S PG +R++KNLRVC+
Sbjct: 336 VLMKEDGYVPDTTEVLRLVNEDEKESLLFFHSEKLAIACGLISTPPGTTLRVVKNLRVCS 395
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+AT ISK+ R+ +V D NRFHH +NG CSC D+W
Sbjct: 396 DCHSATKFISKITGRKIIVRDLNRFHHTENGVCSCGDYW 434
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 151/398 (37%), Positives = 223/398 (56%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++S EAL LF E+Q+ + +TM +L AC L ALE G +H +I++ +D
Sbjct: 428 YSKNSLPNEALNLFVEMQYNS-KPNSITMACILPACASLAALERGQEIHGHILRNGFSLD 486
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL KD+++ T +I M G G++A+ F EM+
Sbjct: 487 RHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRN 546
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD ++F+ +L ACSH+GL+DE FN+M I P EHY C+V +L RAG ++
Sbjct: 547 SGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLS 606
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
KA + IK MP+ D + G LL CRI+ +++ AE+ A+ + EL P+N G YV+L+N Y+
Sbjct: 607 KAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYA 666
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ KW++VK++RE + R ++K PGC IE+ G VH FV
Sbjct: 667 EAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRT 726
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G P L D+ EKE AL H+EK+A+ FG++S PG +R+ KNLRVC D
Sbjct: 727 RMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGD 786
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH +SK+ R+ ++ D NRFHHFK+GSCSC+ W
Sbjct: 787 CHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 824
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
YV + E+ L LF ++ G+ D TMVS++ C++ G L +G LH Y +K
Sbjct: 226 YVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKE 285
Query: 56 -----------------NIEVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
N + V M + V++ T++I A G + ++ F+EM+
Sbjct: 286 LTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEK 345
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
G+ PD T +L AC+ GL++
Sbjct: 346 EGISPDIFTITTILHACACTGLLE 369
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 23/138 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + ++ LF E++ +G++ D T+ ++L AC G LE G +H YI + ++ D
Sbjct: 327 YAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSD 386
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL KD+++ +I + N+AL F EMQ
Sbjct: 387 LFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQY 446
Query: 99 RGVKPDAITFVGVLVACS 116
KP++IT +L AC+
Sbjct: 447 NS-KPNSITMACILPACA 463
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 157/398 (39%), Positives = 217/398 (54%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEAL LF E++ G ++ T S L C + ALE+G +H ++K +E
Sbjct: 369 YAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESG 428
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL K+V++ +I A G G +AL F M+
Sbjct: 429 CYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKK 488
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD +T VGVL ACSH GLVD+ +F M++ YGI + +HY C++ +LGRAGR+
Sbjct: 489 TGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLD 548
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A+ L+KNMP D G LLGA RIH N E E+AA+ + E+ PDN G YV+LSN Y+
Sbjct: 549 DAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYA 608
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+S +W V R+R M +R +KK PG +EV +H F
Sbjct: 609 ASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDL 668
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+V + VL D++EEEK L H+EKLA+ FG+++ G IR+IKNLRVC D
Sbjct: 669 KMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCED 728
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ISK+ R ++ D +RFHHF G CSC D+W
Sbjct: 729 CHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 766
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1005
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 150/398 (37%), Positives = 219/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y +D E+A+ F ++Q +G+ ++ T+ S L C+ + L+ G LH +K D
Sbjct: 608 YAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGD 667
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL +D ++ +I + GQG KAL+ F M
Sbjct: 668 MFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLD 727
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G PD +TF+GVL ACSH GL++E HFN +S+ YGI P+IEHY C+V ILGRAG+
Sbjct: 728 EGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFH 787
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+ E I+ M + + + +LGAC++H N+E ERAA +L EL P+ +Y++LSN ++
Sbjct: 788 EVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFA 847
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ W V +R LM+ R +KK PGC +EV+G VH F+
Sbjct: 848 AKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQ 907
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ PN VL ++ + EK+ L H+E+LA+ F L+S IRI KNLR+C D
Sbjct: 908 KLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGD 967
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH IS++ N+E VV D N FHHFKNGSCSC++FW
Sbjct: 968 CHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 1005
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 23/183 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ ++ C+ L +F ++ +G + T +S+L +C+ L +++G +H I+K +++ +
Sbjct: 507 FHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGN 566
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL +D+ T ++ A GQG KA++ F +MQ
Sbjct: 567 DFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQR 626
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVKP+ T L CS +D + M+ K G + LV + + G +
Sbjct: 627 EGVKPNEFTLASSLSGCSRIATLDSG-RQLHSMAIKAGQSGDMFVASALVDMYAKCGCVE 685
Query: 159 KAE 161
AE
Sbjct: 686 DAE 688
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 22/134 (16%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD------- 60
E+ L LF + + K T+ ++L C + G L G +H ++ E+D
Sbjct: 312 EKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCL 371
Query: 61 ------VGL-GMALK--------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
GL G ALK DV++ +A+I L GQ +A E F M+ GV P+
Sbjct: 372 VDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQ 431
Query: 106 ITFVGVLVACSHAG 119
T ++ A + G
Sbjct: 432 FTLASLVSAATDLG 445
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 22/107 (20%)
Query: 32 LLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----------------------KD 69
+L C G L G +H ++K I D L +L +D
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 193
Query: 70 VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACS 116
V++ TALI G G+ A+ F EM+ GV+ + T+ L ACS
Sbjct: 194 VVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACS 240
>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
Length = 485
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/400 (38%), Positives = 230/400 (57%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREV--QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
Y ++ AL L+RE+ KG+ ++VT ++LL AC+ LGAL G +H + ++ +
Sbjct: 86 YAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFD 145
Query: 59 VDVGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
D+ + GM +DV++ +++I A G+ ++A+E ++ M
Sbjct: 146 TDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRM 205
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
G PD I F+ VL ACS++G+V+ F + + P++EHY C+V +LGRAG+
Sbjct: 206 LSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGK 265
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ AE+L++ MP + +L AC+++ ++E E AA+ + EL P+N Y+ L+N
Sbjct: 266 LRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSPYITLANI 325
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
YS++++ K RIR+LM ER IKK PGC IEV VHEF+
Sbjct: 326 YSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRDEIYAEIQRL 385
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+AG+ + VL D++E+EKE L H+EKLAI FGL+S PG +RI+KNLRVC
Sbjct: 386 GRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPPGAPLRIVKNLRVC 445
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+DCH AT +ISKV RE +V D NRFHHF +G CSC D+W
Sbjct: 446 SDCHAATKVISKVTGREILVRDTNRFHHFLDGMCSCNDYW 485
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 25/172 (14%)
Query: 20 KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL------------ 67
+G+ +KVT V++L T G+LE G +H + +EVDV +G AL
Sbjct: 4 RGVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEE 63
Query: 68 ----------KDVMTLTALIVVLAMCGQGNKALEYFYEM--QIRGVKPDAITFVGVLVAC 115
+V++ +A++ A G ALE + EM +G+ P+ +TF+ +L AC
Sbjct: 64 ARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDAC 123
Query: 116 SHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
S G + E ++E+ G + LV GR G + A+ + M
Sbjct: 124 SFLGALAEGRKIHAAVAER-GFDTDLVVCNALVNFYGRCGSLGDAKIVFDGM 174
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 154/400 (38%), Positives = 227/400 (56%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V+D EA+ LF E+ G+ ++ T+VS+L AC GA+ +G + I ++ I ++
Sbjct: 172 FVDDDRALEAIRLFEEMVEDGVEPNEATVVSVLRACADAGAVGMGRRVQGVIEERKIGLE 231
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL KDV TA+I LA G +A+ F +M+
Sbjct: 232 ANVRTALIDMYAKCGSIGSARKVFDGIVNKDVFAWTAMISGLANHGLCEEAVTLFDQMES 291
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD T VL AC +AG E ++FN M KYGI+P+I+HYGC+V +L R G +
Sbjct: 292 FGLRPDERTMTAVLSACRNAGWFSEGFAYFNSMWCKYGIKPTIQHYGCMVDLLARTGHLD 351
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQ--LLELLPDNGGSYVILSNR 216
+AEE I+ MP+ D + L+ A ++H +++ +E+ + LL++ D+ GSYV+L N
Sbjct: 352 EAEEFIRKMPIEPDVVLWRTLIWASKVHGDIDRSEQLMKDRGLLKMDSDDCGSYVLLGNV 411
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA----------------- 259
Y+S+ KW ++RELM ++ + KPPGC IEVDG+VHEF
Sbjct: 412 YASAGKWHDKAKMRELMNQKGLSKPPGCSRIEVDGLVHEFAAGDSGHIEAEKIYAKLDEV 471
Query: 260 -------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
G+ P SEVL ++D +EK L H+EKLA+ FGL+ PG IRI+KNLR C
Sbjct: 472 EERLKAEGYHPKLSEVLLEIDNKEKAFQLRHHSEKLAVAFGLIKTSPGTEIRIVKNLRSC 531
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+ +ISK+Y ++ +V DR RFHHF NG CSCKD+W
Sbjct: 532 EDCHSVLKLISKIYQQDIIVRDRIRFHHFINGDCSCKDYW 571
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 92/241 (38%), Gaps = 30/241 (12%)
Query: 1 YVEDSACEEALLLFREV--QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
Y + +AL LF + Q DK T LL +C L VG LH I K +E
Sbjct: 69 YSQTPDPTQALHLFLSMLCQPTSPRPDKFTYPFLLKSCARLKQPRVGKQLHGLIYKSGLE 128
Query: 59 VDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM 96
D + L +DV++ T++I + +A+ F EM
Sbjct: 129 SDRYVSNGLIHMYSSCGKSGRAYKVFGKMRDRDVVSWTSMIDGFVDDDRALEAIRLFEEM 188
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
GV+P+ T V VL AC+ AG V R + K G+ ++ L+ + + G
Sbjct: 189 VEDGVEPNEATVVSVLRACADAGAVGMGRRVQGVIEERKIGLEANVR--TALIDMYAKCG 246
Query: 156 RIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQL--LELLPDNGGSYVIL 213
I A ++ + + D F ++ H E A Q+ L PD +L
Sbjct: 247 SIGSARKVFDGI-VNKDVFAWTAMISGLANHGLCEEAVTLFDQMESFGLRPDERTMTAVL 305
Query: 214 S 214
S
Sbjct: 306 S 306
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 157/400 (39%), Positives = 228/400 (57%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKG--LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
Y ++ EA+ ++ ++ +G ++ ++ T VS+L AC+ GAL GM LH ++K +
Sbjct: 425 YAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLY 484
Query: 59 VDVGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEM 96
+DV +G +L D+ + LI G G KA+ F EM
Sbjct: 485 LDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEM 544
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
GVKPD ITFV +L ACSH+GLVDE F +M YGI PS++HYGC+V + GRAG+
Sbjct: 545 LDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQ 604
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ A IK+MP+ D + G LL ACR+H N++ + A++ L E+ P++ G +V+LSN
Sbjct: 605 LEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNM 664
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVV----------------------- 253
Y+S+ KW+ V IR + + + ++K PG +EVD V
Sbjct: 665 YASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTAL 724
Query: 254 HEFVK-AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
HE +K G+VP+ VL D++++EKE L H+E+LA+ F L++ IRI KNLRVC
Sbjct: 725 HEKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFKNLRVC 784
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+ T ISK+ RE +V D NRFHHFKNG CSC D+W
Sbjct: 785 GDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 28/142 (19%)
Query: 1 YVEDSACEEALLLFREVQHKGLTG-DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y + +EAL L GL D VT+VSLL ACT G G+ +H Y +K +E
Sbjct: 226 YCQSGNAKEALTL-----SDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLES 280
Query: 60 DVGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
++ + M ++D+++ ++I + Q +A+ F EM+
Sbjct: 281 ELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMR 340
Query: 98 IRGVKPDAITFVGVLVACSHAG 119
+ ++PD +T + + S G
Sbjct: 341 LSRIQPDCLTLISLASILSQLG 362
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV-DVGLGMAL- 67
A+LLF+E++ + D +T++SL + LG + + + ++K + D+ +G A+
Sbjct: 332 AILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVV 391
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG--VKPD 104
KDV++ +I A G ++A+E + M+ G + +
Sbjct: 392 VMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISAN 451
Query: 105 AITFVGVLVACSHAGLVDERIS-HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
T+V VL ACS AG + + + H L+ K G+ + L + G+ GR+ A L
Sbjct: 452 QGTWVSVLPACSQAGALRQGMKLHGRLL--KNGLYLDVFVGTSLADMYGKCGRLDDALSL 509
Query: 164 IKNMP 168
+P
Sbjct: 510 FYQIP 514
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/398 (38%), Positives = 225/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +EA+ LFR++ G+ ++ ++ + AC+ L AL +G LH + +K ++ D
Sbjct: 386 YSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTED 445
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + ++ KDV + +I + G+G +ALE F +M
Sbjct: 446 IFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLR 505
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD TF G+L+ACSHAGLV++ + +FN M + I P +EHY C+V +LGRAGRI
Sbjct: 506 LGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRID 565
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A LI+ MP D + LL +CRIH NL E+ A +LLEL P+ +YV++SN ++
Sbjct: 566 DALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFA 625
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S KW V+R+R M + ++K GC IEV G VH F+
Sbjct: 626 GSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEV 685
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P+ VL D++EE+K L H+EKLAI+FGL++ G+ +R+ KNLR+C D
Sbjct: 686 KISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGD 745
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ISKV NR+ VV D RFHHF++G CSC D+W
Sbjct: 746 CHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 783
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 22/139 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++S +AL L+ ++ GL D T+ SLLLAC+ + +L G +H + ++ + VD
Sbjct: 285 YAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVD 344
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G++L + +++ +I + G ++A+ F +M
Sbjct: 345 PFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLS 404
Query: 99 RGVKPDAITFVGVLVACSH 117
G++P I + V ACS
Sbjct: 405 DGIQPYEIAIMCVCGACSQ 423
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 30/143 (20%)
Query: 1 YVEDSACEEALLLFREV----QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN 56
Y + E+A+ +F E+ +HK D T+ ++ AC L L +G +H K +
Sbjct: 182 YTRNELFEDAMSIFSELISVTEHKP---DNFTLPCVIKACAGLLDLGLGQIIHGMATKMD 238
Query: 57 IEVDVGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEYF 93
+ DV +G AL K V + AL+ A KAL+ +
Sbjct: 239 LVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLY 298
Query: 94 YEMQIRGVKPDAITFVGVLVACS 116
+M G+ PD T +L+ACS
Sbjct: 299 LQMTDSGLDPDWFTIGSLLLACS 321
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/394 (40%), Positives = 221/394 (56%), Gaps = 48/394 (12%)
Query: 7 CE--EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG 64
CE EAL LF + +G+ VT+ S+L AC GAL+VG +H + V
Sbjct: 169 CELLEALELFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQ 228
Query: 65 MALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIRGVK 102
AL D+ ++ TA+I LA GQG++ALE F EM + G+
Sbjct: 229 TALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMV 288
Query: 103 PDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE 162
DA TF+ VL ACSHAGL+ E + F+ M E Y I P+ HY + +GRAGR+ AEE
Sbjct: 289 ADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEE 348
Query: 163 LIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRK 222
LI +MP + LL ACRIH E A + A+ L +L P++ +Y +L N Y+++ +
Sbjct: 349 LIHSMPFHPETLTWKTLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGR 408
Query: 223 WKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------K 258
+ R+R+ M +R +KK PG IEV VHEFV +
Sbjct: 409 YGDQMRVRKGMTDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMRE 468
Query: 259 AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTA 318
AG+VPN +VL ++EEEKE + LH+EKLAI FGL++ PG + I+KNLRVC+DCH A
Sbjct: 469 AGYVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAA 528
Query: 319 TNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
T +I+K+ R VV D +RFHHF++G CSCKD+W
Sbjct: 529 TKVIAKIMRRRIVVRDTHRFHHFEDGQCSCKDYW 562
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 10/172 (5%)
Query: 64 GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG-VKPDAITFVGVLVACSHAGLVD 122
G+ + V++ +A+I A+ G+G +AL F+ M+ G V+P+A+TF GV AC G+++
Sbjct: 45 GILERTVVSWSAMIGAYALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNAC---GVIE 101
Query: 123 E----RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGG 178
+ R H M+ + L+ + R G + +A ++ M D F
Sbjct: 102 DLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLEEARKVFDTMDHP-DAFSWTS 160
Query: 179 LLGACRIH-DNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRI 229
++ AC + + LEA E + LE +P + + N + S K K+I
Sbjct: 161 MITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQI 212
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/380 (40%), Positives = 216/380 (56%), Gaps = 52/380 (13%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKD--------------- 69
+ +T++++L C L AL G +H Y ++ + V +G AL D
Sbjct: 435 NSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVF 494
Query: 70 -------VMTLTALIVVLAMCGQGNKALEYFYEMQIRG-----VKPDAITFVGVLVACSH 117
V+T +I+ M G+G ++LE F +M G VKP +TF+ + +CSH
Sbjct: 495 DQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSH 554
Query: 118 AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHF-VL 176
+G+VDE +S F+ M ++GI P+ +HY C+V ++GRAG++ +A L+ MP D
Sbjct: 555 SGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAW 614
Query: 177 GGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAER 236
LLGACRI+ N+E E AA+ LL+L PD YV+LSN YSS+ W K +R M
Sbjct: 615 SSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAM 674
Query: 237 NIKKPPGCILIEVDGVVHEFV------------------------KAGFVPNKSEVLFDM 272
+KK PGC IE VH+F+ K G+VP+ + VL D+
Sbjct: 675 GVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLKKEGYVPDTACVLHDI 734
Query: 273 DEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVV 332
DEEEKET L H+EKLAI FG+++ PG IR+ KNLRVCNDCHTA+ ISK+ +RE ++
Sbjct: 735 DEEEKETILCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHTASKFISKIEDREIIL 794
Query: 333 MDRNRFHHFKNGSCSCKDFW 352
D RFHHFK+G+CSC D+W
Sbjct: 795 RDARRFHHFKDGTCSCGDYW 814
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 26/139 (18%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK--------KNIEV 59
E A+ FR + +G T+VS+ LAC++L + G+WL I +
Sbjct: 95 EVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRD-GLWLGKQIHGCCFRKGHWRTFSN 153
Query: 60 DVGLGMALK-----------------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVK 102
+ + M K D++T ++I + + +AL + M + GVK
Sbjct: 154 NALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVK 213
Query: 103 PDAITFVGVLVACSHAGLV 121
PD +TF VL ACSH L+
Sbjct: 214 PDGVTFASVLPACSHLDLL 232
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 39/155 (25%)
Query: 1 YVEDSACEEALLLFREVQHK-GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y + E+AL+LF E++ GL + TM S++ A + +H Y++K+ +E
Sbjct: 293 YAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLET 352
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ L AL +D+++ +I +CG+ + AL +EMQ
Sbjct: 353 NRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQ 412
Query: 98 -------IRG---------VKPDAITFVGVLVACS 116
G KP++IT + VL C+
Sbjct: 413 RIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCA 447
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EAL+ R + +G+ D VT S+L AC+HL L G +H Y ++ + DV ++
Sbjct: 199 EALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTD---DV-----IE 250
Query: 69 DVMTLTALIVVLAMCGQ 85
+ +AL+ + CGQ
Sbjct: 251 NSFVGSALVDMYCNCGQ 267
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 220/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL LF ++ +G ++ + S L C + ALE+G LH ++K E
Sbjct: 379 YSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETG 438
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G MA KD+++ +I + G G +AL +F M+
Sbjct: 439 CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKR 498
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD T V VL ACSH GLVD+ +F+ M++ YG+RP+ +HY C+V +LGRAG +
Sbjct: 499 EGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLE 558
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A L+KNMP D + G LLGA R+H N E AE AA ++ + P+N G YV+LSN Y+
Sbjct: 559 EAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYA 618
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
SS +W V ++R M ++ +KK PG IE+ H F
Sbjct: 619 SSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDL 678
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
KAG+V S VL D++EEEKE + H+E+LA+ +G++ G IR+IKNLRVC D
Sbjct: 679 RMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCED 738
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ++KV R ++ D NRFHHFK+GSCSC D+W
Sbjct: 739 CHNAIKYMAKVTGRLIILRDNNRFHHFKDGSCSCGDYW 776
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 154/399 (38%), Positives = 233/399 (58%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +EAL LF+E+Q +G T+V++L C HL AL+ G +H +I++ ++
Sbjct: 383 YAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRME 442
Query: 61 ----------------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V MA +D++ +++ A G ++ L+ F +MQ+
Sbjct: 443 MVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQL 502
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVK DA++FV VL A SH+G V + +F M + + I P+ E YGC+V +LGRAGRI
Sbjct: 503 DGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQ 562
Query: 159 KAEELIKNMPMAL-DHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A +++ + L D + LLGACR H+ + A+ AA+Q+LE P + G+YV+LSN Y
Sbjct: 563 EAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVY 622
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------- 258
+++ W V R+R+LM R +KK PG IE+ VHEF++
Sbjct: 623 AAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLN 682
Query: 259 -----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
AG++P+ +L D+++E KE L H+E+LAI FGL+S PG +R+IKNLRVC+
Sbjct: 683 SEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLISTPPGTPLRVIKNLRVCS 742
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTAT ISK+ RE +V D +RFH+FK+G CSCKD+W
Sbjct: 743 DCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 781
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 26/209 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ EA+ LF +Q G+ + +T V +L T L +L G +H + + + D
Sbjct: 282 YVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRD 341
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL KDV+T T + V A G +AL+ F EMQ+
Sbjct: 342 AVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQL 401
Query: 99 RGVKPDAITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G +P + T V VL C+H A L R H +++ ++ + +E L+ + G+ G++
Sbjct: 402 EGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVE--TALINMYGKCGKM 459
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIH 186
A+A + + M D V +LGA H
Sbjct: 460 AEAMSVFEKMA-KRDILVWNSMLGAYAQH 487
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 25/258 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + AL +F ++Q + + KVT V++L AC +L+ GM +H I+++ E D
Sbjct: 80 YCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGD 139
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL +DV++ TA+I Q A + MQ+
Sbjct: 140 VFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQL 199
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV P+ IT V A + E + L+S + + V + G AG +
Sbjct: 200 DGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGV-MESDVRVMNSAVNMFGNAGLLG 258
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLEL-LPDNGGSYVILSNRY 217
A L ++M + D ++ ++N A R +L + + N ++V++ N Y
Sbjct: 259 DARRLFEDM-VDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVY 317
Query: 218 SSSRKWKKVKRIRELMAE 235
+S K K I EL+ E
Sbjct: 318 TSLTSLAKGKVIHELVKE 335
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 6/150 (4%)
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC-SHAGLVDERIS 126
KDV T +I + G ++AL FY+MQ V P +T+V +L AC S L D
Sbjct: 68 KDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEI 127
Query: 127 HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIH 186
H ++ + G + L+ + + G + A + K + D ++ AC H
Sbjct: 128 HGQILQQ--GFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHR-DVVSWTAMIAACVQH 184
Query: 187 DNLEAAERAAQ--QLLELLPDNGGSYVILS 214
D A + QL ++P+ Y + +
Sbjct: 185 DQFALARWLYRRMQLDGVVPNKITLYTVFN 214
>gi|218202317|gb|EEC84744.1| hypothetical protein OsI_31741 [Oryza sativa Indica Group]
Length = 563
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 159/379 (41%), Positives = 218/379 (57%), Gaps = 29/379 (7%)
Query: 2 VEDSACEEALLLFRE-VQHKGLTGDKVTMV--SLLLACTHLGALEVGMWLHPYIMKKNIE 58
VE+ EEA+ +FRE + D+VT+ + L + + M+ ++ +
Sbjct: 186 VENGEYEEAIAVFREMLASMECLPDRVTLFPGKGIEVEERLSSALINMYSKCACIEGAVH 245
Query: 59 VDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHA 118
V LG A +V T A++ G KALE F M+I G+ P+ ITF VL ACSH
Sbjct: 246 VFENLG-AQMNVDTWNAMLAGFTANGCSEKALELFARMEITGLVPNKITFNTVLNACSHG 304
Query: 119 GLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGG 178
G V+E + F M++ YGI P I HYGC+V + RAG KAE++I+ MPM D V
Sbjct: 305 GFVEEGMGCFERMTKVYGIEPDIAHYGCMVDLFCRAGLFDKAEKMIQMMPMKPDAAVWKA 364
Query: 179 LLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNI 238
L+GAC+ H N E +A L+E P++ YV+LSN Y+ W V ++R+LM +R +
Sbjct: 365 LVGACKTHRNFELGRKAGHMLIEAAPNDHAGYVLLSNIYALDGNWTGVHKVRKLMLDRGV 424
Query: 239 KKPPGCILIEVDGVVHEFVK------------------------AGFVPNKSEVLFDMDE 274
+K PG IE+DGV+HEF+ AG+VP+ S VL D+D+
Sbjct: 425 QKVPGSSSIEIDGVIHEFISGDKSHSSKEDIYEMLSEMCQQLKVAGYVPDTSHVLLDIDD 484
Query: 275 EE-KETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVM 333
E+ KE++L LH+EKLAI FGL+S PG IRI KNLRVC DCH A ++SK+Y R +V
Sbjct: 485 EDVKESSLALHSEKLAIAFGLISTAPGTPIRIAKNLRVCGDCHNAVKLLSKIYGRCIIVR 544
Query: 334 DRNRFHHFKNGSCSCKDFW 352
D NRFHHF+ GSCSC DFW
Sbjct: 545 DANRFHHFREGSCSCGDFW 563
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 161/409 (39%), Positives = 231/409 (56%), Gaps = 58/409 (14%)
Query: 1 YVEDSACEEALLLFREVQHK-GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK-KNIE 58
Y++ +E+ L RE+ + + VT+ S+L AC+ G L +G W+H Y +K K E
Sbjct: 225 YLDSGLTQESFALVREMIFDLEMELNYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKE 284
Query: 59 VDVGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEM 96
+++ +G A+ D V++ A++ LAM G G AL+ F +M
Sbjct: 285 LNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQRNVVSWNAMLSGLAMHGLGRAALDIFPQM 344
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ KPD +TF VL ACSH+GLVD+ +F + YGI P +EHY C+V +LGRAGR
Sbjct: 345 -FKEAKPDDVTFTSVLSACSHSGLVDQGCFYFGNLESVYGITPKVEHYACMVDLLGRAGR 403
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +AE L++ MP+ + VLG LLG+C IH L+ E Q+L++L P N +++LSN
Sbjct: 404 LEEAEILVREMPIRPNEVVLGSLLGSCSIHGKLQLGEHLLQELVQLDPQNTEYHILLSNM 463
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------ 258
Y+ + K + +R+++ +R IKK PG I V G VH+F
Sbjct: 464 YALAGKQNRANSLRQVLKKRGIKKVPGMSSIHVGGQVHQFSAGDKSHPRTREVYNMLDEM 523
Query: 259 ------AGFVPNKSEVLFD---------MDEEEKETALNLHTEKLAITFGLVSPMPGVLI 303
AG+ PN + F +++EEKE AL H+EKLAI FGL+S PGV +
Sbjct: 524 IPRLRLAGYAPNTALQTFAGCDSLEDDLVEQEEKEQALFSHSEKLAICFGLISTGPGVPL 583
Query: 304 RIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
I KNLR+C DCH+A I+SK+YNRE V+ DRNRFH FK GSCSC D+W
Sbjct: 584 HIFKNLRICQDCHSAIKIVSKIYNREIVIRDRNRFHCFKEGSCSCCDYW 632
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 14/189 (7%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V + +EALL+F E++ G+ D+VT+V L C LG + VG H ++K
Sbjct: 93 FVRHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCARLGDVVVGAQGHGCMVK------ 146
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+GLG K A++ + A G +A FYEM+ + V + GV+ + G+
Sbjct: 147 MGLGGVEK---ACNAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVIRS---EGV 200
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLL 180
+ R+ F+ M E+ + +I G L L + A E+I ++ M L++ L +L
Sbjct: 201 RNGRVV-FDEMPERNEVAWTIMIAGYLDSGLTQES-FALVREMIFDLEMELNYVTLCSIL 258
Query: 181 GACRIHDNL 189
AC +L
Sbjct: 259 TACSQSGDL 267
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 160/390 (41%), Positives = 220/390 (56%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EA LF ++ +G+ D T VS+L AC GALE +H + + + D+ +G AL
Sbjct: 519 EAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALV 578
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+DV + T +I LA G+G AL+ F +M++ G KP+
Sbjct: 579 HMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGY 638
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
+FV VL ACSHAGLVDE F +++ YGI P++EHY C+V +LGRAG++ +A+ I N
Sbjct: 639 SFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILN 698
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP+ G LLGAC + NLE AE AA++ L+L P + +YV+LSN Y+++ W++
Sbjct: 699 MPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQK 758
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGFV 262
+R +M R I+K PG IEVD +H FV G+V
Sbjct: 759 LLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAEGYV 818
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ VL + D+E KE AL H+EKLAI +GL+ IR+ KNLRVC+DCHTAT I
Sbjct: 819 PDTRLVLRNTDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIRVYKNLRVCSDCHTATKFI 878
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SKV RE V D RFHHFK+G CSC D+W
Sbjct: 879 SKVTGREIVARDAKRFHHFKDGVCSCGDYW 908
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 26/226 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LF +++ +G D T V++L A ALE +H Y + + VD+ +G AL
Sbjct: 419 EALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALV 477
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
++V T T +I LA G G++A F +M G+ PDA
Sbjct: 478 HMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDAT 537
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
T+V +L AC+ G + E + + + G+ + LV++ + G + A + +
Sbjct: 538 TYVSILSACASTGAL-EWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDD 596
Query: 167 MPMALDHFVLGGLLGACRIHD-NLEAAERAAQQLLELLPDNGGSYV 211
M + D + ++G H L+A + + LE NG S+V
Sbjct: 597 M-LERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFV 641
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 90/189 (47%), Gaps = 23/189 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E E+A+ ++ +++ +G +++T +S+L AC +L+ G +H +I++ + D
Sbjct: 5 YAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSD 64
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL ++V++ T +I LA G+G +A F +MQ
Sbjct: 65 VRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQR 124
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G P++ T+V +L A + AG + E + + + G+ + LV++ ++G I
Sbjct: 125 EGFIPNSYTYVSILNANASAGAL-EWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSID 183
Query: 159 KAEELIKNM 167
A + M
Sbjct: 184 DARVVFDGM 192
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 126/291 (43%), Gaps = 36/291 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+EA F ++Q +G + T VS+L A GALE +H + + + +D+ +G AL
Sbjct: 113 QEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNAL 172
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+D+ + T +I LA G+G +A F +M+ G P+
Sbjct: 173 VHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNL 232
Query: 106 ITFVGVL--VACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
T++ +L A + G + E + + + K G + L+++ + G I A +
Sbjct: 233 TTYLSILNASAITSTGAL-EWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLV 291
Query: 164 IKNM---PMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSS 220
M + + ++GGL H+ + Q+ +PD+ +Y+ L N + S+
Sbjct: 292 FDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQE--GFVPDS-TTYLSLLNTHVST 348
Query: 221 RKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFD 271
W+ VK + + E + L VH +++ G + + ++++FD
Sbjct: 349 GAWEWVKEVHKHAVEVGLVSD----LRVGSAFVHMYIRCGSI-DDAQLIFD 394
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 121/315 (38%), Gaps = 66/315 (20%)
Query: 3 EDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVG 62
++ EA +F ++Q +G D T +SLL GA E +H + ++ + D+
Sbjct: 312 QNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLR 371
Query: 63 LG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG 100
+G +A+++V T A+I +A G +AL F +M+ G
Sbjct: 372 VGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREG 431
Query: 101 VKPDAITFVGVLVA----------------CSHAGLVDERISHFNLMSEKYGIRPSIEHY 144
PDA TFV +L A AGLVD R+ +
Sbjct: 432 FFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGN----------------- 474
Query: 145 GCLVYILGRAGRIAKAEELIKNM---PMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE 201
LV++ + G A+++ +M + ++ GL H EA Q L E
Sbjct: 475 -ALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGH---EAFSLFLQMLRE 530
Query: 202 LLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGF 261
+ + +YV + + +S+ + VK + + L + +VH + K G
Sbjct: 531 GIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSD----LRVGNALVHMYAKCGS 586
Query: 262 VPNKSEVLFDMDEEE 276
V + V DM E +
Sbjct: 587 VDDARRVFDDMLERD 601
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 159/393 (40%), Positives = 228/393 (58%), Gaps = 48/393 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEAL LFR +Q +G+ + VT +L A + L AL++G +H ++++ I V L +L
Sbjct: 448 EEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSL 507
Query: 68 KD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRG-VKPD 104
D V++ A++V + G+G + L+ F M+ VKPD
Sbjct: 508 IDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPD 567
Query: 105 AITFVGVLVACSHAGLVDERISHFNLMSE-KYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
++T + VL CSH GL D+ ++ FN MS K + P +EHYGC+V +LGR+GR+ +A E
Sbjct: 568 SVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEF 627
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
IK MP + G LLGACR+H N++ E A QQLLE+ P N G+YVILSN Y+S+ +W
Sbjct: 628 IKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRW 687
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVH------------------------EFVKA 259
+ V +R+LM ++ + K PG IE+D V+H F +
Sbjct: 688 EDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEV 747
Query: 260 GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
G+VP+ S VL D+DEE+KE L H+EKLA++FGL++ V IR+IKNLR+C DCH
Sbjct: 748 GYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLIASPASVPIRVIKNLRICVDCHNFA 807
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISKVY RE + D+NRFH G CSC+D+W
Sbjct: 808 KYISKVYGREVSLRDKNRFHRIVGGKCSCEDYW 840
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 22/120 (18%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----------------- 67
++ T ++L +CT +G +H I+K N E V +G +L
Sbjct: 364 NEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVF 423
Query: 68 -----KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
+DV++ TA+I A G +ALE F +Q G+K + +T+ GVL A S +D
Sbjct: 424 ECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALD 483
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 161/392 (41%), Positives = 226/392 (57%), Gaps = 48/392 (12%)
Query: 9 EALLLFREVQHKGLTG--DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV------- 59
+AL LF+ + + + VTMV++L AC L ALE G +H YI+++ ++
Sbjct: 267 KALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNA 326
Query: 60 ---------DVGLG------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
+V +G M +DV++ +LI + M G G KA++ F M +GV P
Sbjct: 327 LITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPS 386
Query: 105 AITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
I+F+ VL ACSHAGLV+E F M KY I P +EHY C+V +LGRA R+ +A +LI
Sbjct: 387 YISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLI 446
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWK 224
++M V G LLG+CRIH N+E AERA+ L EL P N G+YV+L++ Y+ ++ W
Sbjct: 447 EDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWS 506
Query: 225 KVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------G 260
+ K + +L+ R ++K PGC IEV V+ FV G
Sbjct: 507 EAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQG 566
Query: 261 FVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATN 320
+VP + VL+D+DEEEKE + H+EKLA+ FGL++ G IRI KNLR+C DCH T
Sbjct: 567 YVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTK 626
Query: 321 IISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISK NRE +V D NRFHHF++G CSC D+W
Sbjct: 627 FISKFANREILVRDVNRFHHFRDGVCSCGDYW 658
Score = 37.7 bits (86), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 31/183 (16%)
Query: 28 TMVSLLLACTHLGALEVGMWLH-----------PYIMKKNIEVDVGLGM---ALK----- 68
T L+ +C +L G+ +H P++ K I + LG ALK
Sbjct: 80 TFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKVFDET 139
Query: 69 ---DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC-----SHAGL 120
+ AL LAM G G + L+ + +M G D T+ VL AC S L
Sbjct: 140 RERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELSVCPL 199
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLL 180
+ H +++ ++G +I L+ + + G ++ A + MP +FV +
Sbjct: 200 RKGKEIHAHIL--RHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPT--KNFVSWSAM 255
Query: 181 GAC 183
AC
Sbjct: 256 IAC 258
>gi|302793743|ref|XP_002978636.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
gi|300153445|gb|EFJ20083.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
Length = 438
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 223/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ +A+ LF E+ + + + VT++ +L AC L AL G +H ++ +
Sbjct: 41 YVQHGDSRQAIRLFDELLARRIEPNSVTLMEVLDACASLAALRDGKRVHAIARDHGVDSE 100
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + A+ D ++ TA++ A G ++AL F MQ
Sbjct: 101 VAVATAIVDMYSKCGCLDEAVEAFARIERHDTVSWTAMLAAFAQHGHIDRALATFQRMQE 160
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+G KP+ +TFV +L ACSH GLV+E +F+LM+ +YGI P +HY C+V +LGRAG +
Sbjct: 161 QGHKPNYVTFVHLLSACSHKGLVEEGRKYFDLMTARYGIAPDAQHYACMVDLLGRAGYLD 220
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE+ + MP A VL LL ACR + +++ ER A+++LE D YV+L++ Y
Sbjct: 221 EAEDFLNRMPGAPHAAVLKSLLSACRSYKDVDRGERIAKRMLESFWDESMPYVVLASIYR 280
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ KW++ RIR LM ER ++K PG IEV+G V EFV
Sbjct: 281 AAGKWEEAARIRSLMVERGVRKDPGRSAIEVEGRVFEFVAGDMSHVQMNPIRAKLQELSS 340
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+VP+ S VL D+ EEEKE L H+EKLA+ FGL++ G IR+IKNLRVC D
Sbjct: 341 AMKEAGYVPDTSLVLHDVAEEEKEQVLLWHSEKLAVAFGLLNTPAGSPIRVIKNLRVCKD 400
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A +IS + R V D +RFHHF+NG CSC D+W
Sbjct: 401 CHDAAKLISAIEQRRIVFRDLSRFHHFENGVCSCGDYW 438
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 157/398 (39%), Positives = 217/398 (54%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEAL LF E++ G ++ T S L C + ALE+G +H ++K +E
Sbjct: 288 YAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESG 347
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL K+V++ +I A G G +AL F M+
Sbjct: 348 CYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKK 407
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD +T VGVL ACSH GLVD+ +F M++ YGI + +HY C++ +LGRAGR+
Sbjct: 408 TGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLD 467
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A+ L+KNMP D G LLGA RIH N E E+AA+ + E+ PDN G YV+LSN Y+
Sbjct: 468 DAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYA 527
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+S +W V R+R M +R +KK PG +EV +H F
Sbjct: 528 ASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDL 587
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+V + VL D++EEEK L H+EKLA+ FG+++ G IR+IKNLRVC D
Sbjct: 588 KMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCED 647
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ISK+ R ++ D +RFHHF G CSC D+W
Sbjct: 648 CHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 156/393 (39%), Positives = 225/393 (57%), Gaps = 48/393 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEAL LFR +Q +G+ + VT S+L A + L AL+ G +H ++++ + V L +L
Sbjct: 194 EEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSL 253
Query: 68 KD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRG-VKPD 104
D V++ A++V + G G +A+E F M+ VKPD
Sbjct: 254 IDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPD 313
Query: 105 AITFVGVLVACSHAGLVDERISHF-NLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
++TF+ VL CSH G+ D + F ++++K G P IEHYGC+V + GRAGR+ +A E
Sbjct: 314 SVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEF 373
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
IK MP + G LLGACR+H N+ E A++LLE+ +N G+YVILSN Y+S+ +W
Sbjct: 374 IKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRW 433
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVHEF------------------------VKA 259
V+ +RELM E+ + K PG IE+D +H F +A
Sbjct: 434 DDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEA 493
Query: 260 GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
G+VP S VL+D+D+E+KE L H+EKLA+ FGL+ G +RIIKNLR+C DCH
Sbjct: 494 GYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFA 553
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+S+VY RE + D+NRFHH G+CSC D+W
Sbjct: 554 KFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 85/191 (44%), Gaps = 25/191 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL LF E+ G ++ T ++L +CT ++G +H ++K + E
Sbjct: 86 YSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESH 145
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G +L +DV++ TA+I A G +AL+ F +Q
Sbjct: 146 IFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQR 205
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G++ + +T+ VL A S +D R H +++ K +++ L+ + + G +
Sbjct: 206 EGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQN--SLIDMYSKCGSL 263
Query: 158 AKAEELIKNMP 168
+ + +MP
Sbjct: 264 TYSRRIFDSMP 274
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 35/166 (21%)
Query: 31 SLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL----------------------GMALK 68
S+L C A+ G +H +++K E V L M +
Sbjct: 15 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 74
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHF 128
+V++ TA+I + G ++AL F EM + G P+ TF VL +C+ + S F
Sbjct: 75 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSS-------SGF 127
Query: 129 NLMSEKYG--IRPSIEHY----GCLVYILGRAGRIAKAEELIKNMP 168
L + + I+ S E + L+ + +AG+I +A + +P
Sbjct: 128 QLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 173
>gi|225463123|ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 152/397 (38%), Positives = 237/397 (59%), Gaps = 48/397 (12%)
Query: 3 EDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVG 62
+ S EAL LF ++ +G ++++++ L AC+ LGAL G +H + K +++++V
Sbjct: 178 QGSKSSEALALFNRMRAEGEKINEISVLGALAACSQLGALRAGEGVHACVRKMDLDINVQ 237
Query: 63 LGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ A+ K V+T +I+ AM G G +ALE F EM
Sbjct: 238 VCNAVIDMYAKCGFADKGFRVFSTMTCGKSVVTWNTMIMAFAMHGDGCRALELFEEMGKT 297
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
V+ D++T++ VL AC+HAGLV+E + F+ M + G+ +++HYG +V +LGRAGR+ +
Sbjct: 298 QVEMDSVTYLAVLCACNHAGLVEEGVRLFDEMVGR-GVNRNVKHYGSVVDLLGRAGRLGE 356
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A +I +MP+ D + LLGAC+ + N+E AE A+++L+E+ ++ G +V+LSN Y++
Sbjct: 357 AYRIINSMPIVPDVVLWQSLLGACKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAA 416
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA-------------------- 259
+W+ V R+RE M R+++K PG IEV+GV+H+FV
Sbjct: 417 RERWEDVGRVREAMKSRDVRKVPGFSYIEVEGVIHKFVNGDQSHPDWREIYAKLDEIRFR 476
Query: 260 ----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
G+V S VL D+ EE+KE AL H+EKLA+ FGL+S G IR+ KNLR+C DC
Sbjct: 477 IKAFGYVAETSLVLHDIGEEDKENALCHHSEKLAVAFGLISTSEGTPIRVNKNLRICGDC 536
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H +ISK+Y++E +V DR RFH FK+GSCSC+D+W
Sbjct: 537 HVVIKLISKIYDQEIIVRDRARFHRFKDGSCSCRDYW 573
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 22/120 (18%)
Query: 22 LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG----------------- 64
L D +T L+A AL +H +++++ D+ LG
Sbjct: 96 LHPDALTFSFSLIASARALALSETSQIHSHLLRRGCHADILLGTTLIDAYAKCGDLDSAQ 155
Query: 65 -----MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
+ L+DV ALI LA + ++AL F M+ G K + I+ +G L ACS G
Sbjct: 156 RVFDEIPLRDVAAWNALIAGLAQGSKSSEALALFNRMRAEGEKINEISVLGALAACSQLG 215
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 155/401 (38%), Positives = 231/401 (57%), Gaps = 49/401 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHP---------- 50
Y +++ +AL +FR ++ +G+ D+VT+V ++ AC LGA + W+
Sbjct: 217 YAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLGASKYANWIRDIAESSGFGVG 276
Query: 51 ------------YIMKKNIE--VDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
Y N+E DV GM ++V + +++IV A+ G+ A++ FY+M
Sbjct: 277 DNVLVGSALIDMYSKCGNVEEAYDVFKGMRERNVFSYSSMIVGFAIHGRARAAIKLFYDM 336
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
GVKP+ +TFVGVL ACSHAGLVD+ F M + YG+ P+ E Y C+ +L RAG
Sbjct: 337 LETGVKPNHVTFVGVLTACSHAGLVDQGQQLFASMEKCYGVAPTAELYACMTDLLSRAGY 396
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ KA +L++ MPM D V G LLGA +H N + AE A+++L EL PDN G+Y++LSN
Sbjct: 397 LEKALQLVETMPMESDGAVWGALLGASHVHGNPDVAEIASKRLFELEPDNIGNYLLLSNT 456
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEV-DGVVHEFVKA---------------- 259
Y+S+ +W V ++R+L+ E+N+KK PG +E +G++H+FV
Sbjct: 457 YASAGRWDDVSKVRKLLREKNLKKNPGWSWVEAKNGMIHKFVAGDVSHPKINEIKKELND 516
Query: 260 --------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
G+ PN S + + +++ EK L H+EKLA+ FGL+S G I+I+KNLR+
Sbjct: 517 LLERLKGIGYQPNLSSLPYGINDREKRLLLMAHSEKLALAFGLLSTDVGSTIKIMKNLRI 576
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH SKV R+ VV D RFHHF NG+CSC +FW
Sbjct: 577 CEDCHIVMCGASKVTGRKIVVRDNTRFHHFLNGACSCSNFW 617
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ + A ++F E+ + D ++ L++A T +G + D
Sbjct: 155 YVKCGSLRCARMVFDEMPER----DVISWTGLIVAYTRIGDMRAAR-------------D 197
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+ G+ +KD++T TA++ A ALE F ++ GV+ D +T VGV+ AC+ G
Sbjct: 198 LFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLG- 256
Query: 121 VDERISHFNLMSEK--YGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGG 178
+ + ++E +G+ ++ L+ + + G + +A ++ K M + F
Sbjct: 257 ASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGM-RERNVFSYSS 315
Query: 179 LLGACRIHDNLEAAERAAQQLLE 201
++ IH AA + +LE
Sbjct: 316 MIVGFAIHGRARAAIKLFYDMLE 338
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 152/398 (38%), Positives = 225/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +EA+ LFR++ G+ ++ ++ + AC+ L AL +G LH + +K ++ D
Sbjct: 484 YSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTED 543
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + ++ KDV + +I + G+G +ALE F +M
Sbjct: 544 IFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLR 603
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD TF G+L+ACSHAGLV++ + +FN M + I P +EHY C+V +LGRAGRI
Sbjct: 604 LGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRID 663
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A LI+ MP D + LL +CRIH NL E+ A +LLEL P+ +YV++SN ++
Sbjct: 664 DALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFA 723
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S KW V+R+R M + ++K GC IEV G VH F+
Sbjct: 724 GSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEV 783
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P+ VL D++EE+K L H+EKLAI+FGL++ G+ +R+ KNLR+C D
Sbjct: 784 KISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGD 843
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ISKV NR+ VV D RFHHF++G CSC D+W
Sbjct: 844 CHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 881
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 22/139 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++S +AL L+ ++ GL D T+ SLLLAC+ + +L G +H + ++ + VD
Sbjct: 383 YAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVD 442
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G++L + +++ +I + G ++A+ F +M
Sbjct: 443 PFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLS 502
Query: 99 RGVKPDAITFVGVLVACSH 117
G++P I + V ACS
Sbjct: 503 DGIQPYEIAIMCVCGACSQ 521
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 153/391 (39%), Positives = 217/391 (55%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EE L LF +++ +GL + AC+ LG+L+ G +H +++ + + G AL
Sbjct: 405 EEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNAL 464
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D ++ A+I LA G G KA+E F +M + PD
Sbjct: 465 ITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDR 524
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
ITF+ +L AC+HAGL+ E +F+ M +YGI P +HY L+ +L RAG KA+ +IK
Sbjct: 525 ITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIK 584
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MP + LL CRIH N+E +AA +LLEL+P G+Y+ILSN Y++ +W +
Sbjct: 585 SMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDE 644
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
V R+R LM ER +KK PGC +EV+ +VH F+ K G+
Sbjct: 645 VARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAVYTYLQQLVNEMKKLGY 704
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ VL DM+ E KE +L+ H+EKLA+ +G++ G IR+ KNLR+C DCH A
Sbjct: 705 VPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKY 764
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISKV RE VV DR RFHHFKNG CSC ++W
Sbjct: 765 ISKVVEREIVVRDRKRFHHFKNGECSCGNYW 795
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 6/153 (3%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE- 123
M ++V+T T +I LA G G + L+ F +M+ G++P F G + ACS G +D
Sbjct: 383 MPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNG 442
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGAC 183
+ H ++ + G + L+ + R G + AE + MP +D ++ A
Sbjct: 443 QQIHSQVI--RLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPY-VDSVSWNAMIAAL 499
Query: 184 RIHDNLEAAERAAQQLL--ELLPDNGGSYVILS 214
H + A +Q++ ++LPD IL+
Sbjct: 500 AQHGHGVKAIELFEQMMKEDILPDRITFLTILT 532
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 15/213 (7%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLAC----THLGALEVGMWLHPYIMKKN 56
YV EEA FR + G+ D+ T SL+ AC +G G +H YI++
Sbjct: 258 YVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTV 317
Query: 57 IEVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACS 116
+E +++ + ALI + +A F +M +R D I++ VL
Sbjct: 318 VEPSHHFVLSVNN-----ALITFYTKYDRMIEARRVFDKMPVR----DIISWNAVLSGYV 368
Query: 117 HAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVL 176
+A ++E S F+ M E+ + ++ G G G K +K+ + +
Sbjct: 369 NAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEG--LKLFNQMKSEGLEPCDYAF 426
Query: 177 GGLLGACRIHDNLEAAERAAQQLLELLPDNGGS 209
G + AC + +L+ ++ Q++ L D+G S
Sbjct: 427 AGAITACSVLGSLDNGQQIHSQVIRLGHDSGLS 459
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 223/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EEAL LF E++ +G+ T SLL +G + G +H ++K ++++
Sbjct: 452 YAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLN 511
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL ++V++ T++I A G +ALE F++M
Sbjct: 512 QSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLE 571
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+P+ +T++ VL ACSH GLV+E HF M ++G+ P +EHY C+V ILGR+G ++
Sbjct: 572 EGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLS 631
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I +MP D V LGACR+H NLE + AA+ ++E P + +Y++LSN Y+
Sbjct: 632 EAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYA 691
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S+ KW +V IR+ M E+N+ K GC +EV+ VH+F
Sbjct: 692 STSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSV 751
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+VPN VL D++EE+KE L H+EK+A+ FGL+S IR+ KNLR+C D
Sbjct: 752 KIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGD 811
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A IS RE +V D NRFHH K+G CSC ++W
Sbjct: 812 CHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 24/136 (17%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN-IEVDVGLGMALK 68
ALL F ++ G ++ + AC+ + VG + +++K ++ DV +G L
Sbjct: 152 ALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLI 211
Query: 69 DV-----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D+ +T T +I L G +A++ F EM + G +PD
Sbjct: 212 DMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDR 271
Query: 106 ITFVGVLVACSHAGLV 121
T GV+ AC++ L+
Sbjct: 272 FTLSGVISACANMELL 287
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 119/332 (35%), Gaps = 78/332 (23%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EA+ LF E+ G D+ T+ ++ AC ++ L +G LH ++ + +D +G L
Sbjct: 254 EAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLI 313
Query: 68 ------------------------KDVMTLTALIV-VLAMCGQGNKALEYFYEMQIRGVK 102
+V + TA+I + G +AL+ F M + V
Sbjct: 314 NMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVI 373
Query: 103 PDAITFVGVLVACSH-----------------------------------AGLVDERISH 127
P+ TF L AC++ +G +D+
Sbjct: 374 PNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKA 433
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL---IKNMPMALDHFVLGGLL-GAC 183
F+++ EK I Y ++ + +A EL I++ M F LL GA
Sbjct: 434 FDILFEKNLIS-----YNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAA 488
Query: 184 RIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPG 243
I + + A+ + L N L + YS + ++ E M +RN+
Sbjct: 489 SIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNV----- 543
Query: 244 CILIEVDGVVHEFVKAGFVPNKSEVLFDMDEE 275
I ++ F K GF E+ M EE
Sbjct: 544 ---ISWTSIITGFAKHGFATQALELFHKMLEE 572
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 158/401 (39%), Positives = 232/401 (57%), Gaps = 50/401 (12%)
Query: 1 YVEDSACEEALLLFREV---QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI 57
Y ++ EAL LFRE+ H + + VTMVS+L AC ALE G +H YI+++ +
Sbjct: 250 YAKNGKPYEALELFREMMLNTHDSVP-NSVTMVSVLQACAAFAALEQGKLIHAYILRRGL 308
Query: 58 EVDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYE 95
+ + + AL KDV+ +LI + G G KA++ F E
Sbjct: 309 DSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEE 368
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
M G P I+F+ VL ACSH GLV+E F M +++GI+PS+EHY C+V +LGRA
Sbjct: 369 MIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRAN 428
Query: 156 RIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSN 215
R+ +A ++I+++ + V G LLGACRIH ++E AERA+++L +L P N G+YV+L++
Sbjct: 429 RLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLAD 488
Query: 216 RYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------ 257
Y+ + W +VKR+++L+ R ++K PG IEV ++ F
Sbjct: 489 IYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVN 548
Query: 258 ------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
+ G+ P VL+D+D+EEKE + H+EKLA+ FGL++ G IRI KNLR+
Sbjct: 549 LSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRL 608
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH+ T ISK +RE +V D NRFHHFK+G CSC D+W
Sbjct: 609 CEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 649
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 7/107 (6%)
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG-----LVD 122
+ + AL LA+ G+GN LE + M + GV D T+ +L AC + L
Sbjct: 133 RTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQK 192
Query: 123 ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPM 169
+ H +++ YG + L+ + R G ++ A + MP+
Sbjct: 193 GKEIHAHILRHGYGAHVHV--MTTLMDMYARFGCVSYASAVFDEMPV 237
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 149/397 (37%), Positives = 218/397 (54%), Gaps = 45/397 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EA+ F+ + H+ + + LL C LG+ ++G +H +K ++ +
Sbjct: 525 YAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSE 584
Query: 61 VGLGMAL---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ + AL +D+ T I A G G +A++ + M+
Sbjct: 585 LIVANALMSMYFKCGCADSHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESV 644
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
GV P+ +TFVG+L ACSHAGLVDE F MS YG+ P +EHY C+V +LGR G +
Sbjct: 645 GVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQG 704
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
AE+ I +MP+ D + LLGAC+IH N E RAA++L P N G+YV+LSN YSS
Sbjct: 705 AEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSS 764
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA-------------------- 259
W +V +R++M +R + K PGC +++ VH FV
Sbjct: 765 LGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTL 824
Query: 260 ----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
G+VP+ VL D+DEE+KE++L H+EKLA+ +GL+ G+ I+I+KNLR+C DC
Sbjct: 825 LRGTGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDC 884
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
HT +S V R+ + D NRFHHF+NGSCSC DFW
Sbjct: 885 HTFIKFVSHVTKRDIDIRDGNRFHHFRNGSCSCGDFW 921
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 27/161 (16%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACT---HLGALEVGMWLHPYIMKKNIEVDVGLGMALKD 69
+FR + H+G + D+ S+L A T LG LEV L P ++K E DV +G ++ +
Sbjct: 210 IFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEV---LRPLVLKTGFESDVVIGTSILN 266
Query: 70 VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFN 129
V T A + + A+++F M V+ + T+ ++ A SH G +D I+
Sbjct: 267 VYTRDASAL--------DIAIKFFDGM----VERNEYTWSTMIAALSHGGRIDAAIA--- 311
Query: 130 LMSEKYGIRP--SIEHYGCLVYILGRAGRIAKAEELIKNMP 168
YG P SI L+ L R GRI +A L + +P
Sbjct: 312 ----VYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIP 348
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 26/153 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------ 54
Y ++ EEAL L + + G+ ++ S LAC+H+GALE G +H +K
Sbjct: 393 YAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFN 452
Query: 55 --------------KNIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+N+E V M +KD ++ + I L A F M
Sbjct: 453 SYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLS 512
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLM 131
R D +++ ++ A + A DE + F M
Sbjct: 513 R----DVVSWTTIISAYAQAERGDEAVEFFKTM 541
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 222/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + ++ LF E++ + L + +TM +L AC L ALE G +H +I++ +D
Sbjct: 300 YAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLD 359
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL KD+++ T +I M G G++A+ F EM+
Sbjct: 360 RHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRN 419
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD ++F+ +L ACSH+GL+DE FN+M I P EHY C+V +L RAG ++
Sbjct: 420 SGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLS 479
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
KA + IK MP+ D + G LL CRI+ +++ AE+ A+ + EL P+N G YV+L+N Y+
Sbjct: 480 KAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYA 539
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ KW++VK++RE + R ++K PGC IE+ G VH FV
Sbjct: 540 EAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRT 599
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G P L D+ EKE AL H+EK+A+ FG++S PG +R+ KNLRVC D
Sbjct: 600 RMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGD 659
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH +SK+ R+ ++ D NRFHHFK+GSCSC+ W
Sbjct: 660 CHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 697
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV + E+ L LF ++ G+ D TMVS+ L L + M+ + I+V
Sbjct: 226 YVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELT---LNNCLLDMYSKSGNLNSAIQVF 282
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACS 116
+G + V++ T++I A G + ++ F+EM+ + P++IT +L AC+
Sbjct: 283 ETMGE--RSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACA 336
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 287 bits (735), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 152/391 (38%), Positives = 223/391 (57%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LF ++Q +G+ +++S+L C L +L+ G +H ++++ + DV + L
Sbjct: 314 EALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLM 373
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
KD++ ++I A G G +AL+ F+EM G P+ +
Sbjct: 374 TMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKV 433
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
T + +L ACS+AG ++E + F M K+ + P++EHY C V +LGRAG++ KA ELI++
Sbjct: 434 TLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIES 493
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
M + D V G LLGAC+ H L+ AE AA++L E PDN G+YV+LS+ +S KW V
Sbjct: 494 MTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDV 553
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------------AGF 261
+R+ M N+ K PGC IEV VH F + AG+
Sbjct: 554 AVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGY 613
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P+ S VL D+DEEEK +L+ H+E+LA+ +GL+ GV IR++KNLRVC DCH A +
Sbjct: 614 SPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKL 673
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISKV RE ++ D NRFHHF NG CSC+D+W
Sbjct: 674 ISKVTEREIILRDANRFHHFNNGECSCRDYW 704
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 150/398 (37%), Positives = 232/398 (58%), Gaps = 48/398 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ ++S EAL LF+ ++ G D+ T+ S+L ACT L LE+G +H +++K + D
Sbjct: 228 FAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQD 285
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L AL KDV++ + ++ LA G +ALE F M+
Sbjct: 286 LILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKE 345
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G +P+ IT +GVL ACSHAGLV++ +F M + +G+ P EHYGCL+ +LGRAGR+
Sbjct: 346 SGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLD 405
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI M D LLGACR+H N++ A AA++++EL P++ G+Y++LSN Y+
Sbjct: 406 EAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYA 465
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++++W+ V +R+ M R I+K PGC IEVD +H F+
Sbjct: 466 NTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLNDLIE 525
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VP+ + VL D++ E+KE +L H+EKLAI FGL++ +RI KNLR+C D
Sbjct: 526 RVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMNLSREKTVRIRKNLRICGD 585
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH ++S++ +R V+ D R+HHF++G CSC D+W
Sbjct: 586 CHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACT--------HLGALEVGMWLHPYIM 53
+ D A + +L+FRE G+ + T S+L AC H G ++ G+ ++
Sbjct: 135 LNDKALKCLILMFRE----GVRPNMFTYSSVLRACDGLPNLRQLHCGIIKTGLESDVFVR 190
Query: 54 KKNIEV-------DVGLG----MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVK 102
I+V D LG M +D++ ++I A GN+AL F M+ G
Sbjct: 191 SALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFL 250
Query: 103 PDAITFVGVLVACSHAGLVD 122
D T VL AC+ L++
Sbjct: 251 ADQATLTSVLRACTGLALLE 270
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 160/398 (40%), Positives = 221/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----KN 56
Y ++ + EEAL +FR + G+ VT SL+ A +L L +G LH Y+++ N
Sbjct: 246 YAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDN 305
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
I + L G+ D+++ TA+I+ A+ G +A F M++
Sbjct: 306 IFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMEL 365
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
VKP+ ITF+ VL ACSHAGLVD +FN MS +YG PS+EH L LGRAG +
Sbjct: 366 GNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLD 425
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A I M + V LL ACR+H N AE A+++ EL P + GS+VILSN YS
Sbjct: 426 EAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYS 485
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
+S +W + ++R+ M + +KK P C IEV +H F
Sbjct: 486 ASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSE 545
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
++ G+VPN +VL D++EE+K L H+EKLAI FG++S PG IR++KNLRVC D
Sbjct: 546 QMIRQGYVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVD 605
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT ISK+ RE VV D NRFH FK+G+CSC DFW
Sbjct: 606 CHIATKFISKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 14/145 (9%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+EAL + RE+ G D T+ ++L ++ GM +H Y +K + DV +G
Sbjct: 152 QEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVG--- 208
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISH 127
++LI + A C Q + +++ F DA+ + +L + G V+E +
Sbjct: 209 ------SSLIDMYANCTQMDYSMKVFDSFS----DCDAVLWNSMLAGYAQNGSVEEALGI 258
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILG 152
F M + G+RP + L+ G
Sbjct: 259 FRRMLQA-GVRPVPVTFSSLIPAFG 282
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 156/405 (38%), Positives = 237/405 (58%), Gaps = 54/405 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YVE +EAL +F E+ G+ D V+M S++ AC +LG L+ W+H I +E +
Sbjct: 319 YVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESE 378
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL ++V++ +++I L+M G+ + AL F M+
Sbjct: 379 LSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQ 438
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V+P+ +TFVGVL CSH+GLV+E F M+++Y I P +EHYGC+V + GRA +
Sbjct: 439 ENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLR 498
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E+I++MP+A + + G L+ ACRIH LE + AA+++LEL PD+ G+ V++SN Y+
Sbjct: 499 EALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYA 558
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++W+ V+ IR +M E+N+ K G I+ +G HEF+
Sbjct: 559 REQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVS 618
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMP-------GVLIRIIK 307
AG+VP+ VL D++EEEK+ + H+EKLA+ FGL++ GV IRI+K
Sbjct: 619 KLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGV-IRIVK 677
Query: 308 NLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
NLRVC DCH ++SKVY RE +V DR RFH +KNG CSC+D+W
Sbjct: 678 NLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/219 (16%), Positives = 85/219 (38%), Gaps = 64/219 (29%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL---- 63
+EA LF E++ + D++ + +++ AC G + ++ ++++ ++ +D L
Sbjct: 194 DEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTAL 253
Query: 64 ------------------GMALKDVMTLTALIVVLAMCGQ-------------------- 85
M+++++ TA++ + CG+
Sbjct: 254 VTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWT 313
Query: 86 -----------GNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE-----RISHFN 129
+AL F EM G+KPD ++ V+ AC++ G++D+ H N
Sbjct: 314 TMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVN 373
Query: 130 LMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
G+ + L+ + + G + ++ + MP
Sbjct: 374 ------GLESELSINNALINMYAKCGGLDATRDVFEKMP 406
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 75/182 (41%), Gaps = 23/182 (12%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLH-----------PYIMKKNIE 58
+L ++ ++H G D+ + + +L A + + AL GM LH P++ ++
Sbjct: 95 TILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMD 154
Query: 59 VDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
+ G M+ +DV+T +I G ++A + F EM+ V PD +
Sbjct: 155 MYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMI 214
Query: 108 FVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
++ AC G + + + + E +R LV + AG + A E + M
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYEFLIEN-DVRMDTHLLTALVTMYAGAGCMDMAREFFRKM 273
Query: 168 PM 169
+
Sbjct: 274 SV 275
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 157/399 (39%), Positives = 217/399 (54%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +EA+ LFR + G + T+ ++L C L LE G +H ++ E
Sbjct: 404 YEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQS 463
Query: 61 VGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ ++ K+ +T T++IV LA G G A+ F EM
Sbjct: 464 SSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEML 523
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GVKPD ITFVGVL AC+H G VDE +F + +K+GI P + HY C+V +L RAG
Sbjct: 524 RVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLF 583
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
++A+E I+ MP+ D G LL ACR+H N + AE AA++LL + P N G+Y LSN Y
Sbjct: 584 SEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVY 643
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF--------------------- 256
S+ +W +I + ++++KK G + VH F
Sbjct: 644 SACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVYRTAAKMW 703
Query: 257 ---VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
KAGFVP+ VL D+D+E KE L+ H+EKLAI FGLVS +RI+KNLRVCN
Sbjct: 704 DDIKKAGFVPDLQSVLHDVDDELKEEMLSRHSEKLAIAFGLVSTPEKTTLRIMKNLRVCN 763
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTA ISKV +RE ++ D RFHHFK+G CSCKD+W
Sbjct: 764 DCHTAIKFISKVADREIILRDATRFHHFKDGFCSCKDYW 802
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 29/156 (18%)
Query: 1 YVEDSACEEALLLF-REVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----- 54
Y ++ +AL F R + + + D+ T+ S+L AC +LG + +G +H YI++
Sbjct: 269 YNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPY 328
Query: 55 -------------KNIEVDVGLG------MALKDVMTLTALIVVLAMCGQGNKALEYFYE 95
K+ V+ G MA +V++ TAL+ G A E F
Sbjct: 329 IGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDV 388
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLM 131
M R D + + ++V G DE + F LM
Sbjct: 389 MSNR----DVVAWTAMIVGYEQNGHNDEAMELFRLM 420
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 22/179 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EA+ +F ++ GL+ + T+ ++L +C A VG +H +++K LG++
Sbjct: 145 EAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVK--------LGLS-S 195
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHF 128
V +++ + CG A F M R V ++ ++ +H G +D +S F
Sbjct: 196 CVPVANSVLNMYGKCGDAETARAVFERMPERSVS----SWNAMVSLDAHLGRMDLALSLF 251
Query: 129 NLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM----PMALDHFVLGGLLGAC 183
M ++ +I + ++ + G AKA M MA D F + +L AC
Sbjct: 252 ENMPDR-----TIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSAC 305
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 156/393 (39%), Positives = 225/393 (57%), Gaps = 48/393 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEAL LFR +Q +G+ + VT S+L A + L AL+ G +H ++++ + V L +L
Sbjct: 661 EEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSL 720
Query: 68 KD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRG-VKPD 104
D V++ A++V + G G +A+E F M+ VKPD
Sbjct: 721 IDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPD 780
Query: 105 AITFVGVLVACSHAGLVDERISHF-NLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
++TF+ VL CSH G+ D + F ++++K G P IEHYGC+V + GRAGR+ +A E
Sbjct: 781 SVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEF 840
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
IK MP + G LLGACR+H N+ E A++LLE+ +N G+YVILSN Y+S+ +W
Sbjct: 841 IKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRW 900
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVHEF------------------------VKA 259
V+ +RELM E+ + K PG IE+D +H F +A
Sbjct: 901 DDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEA 960
Query: 260 GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
G+VP S VL+D+D+E+KE L H+EKLA+ FGL+ G +RIIKNLR+C DCH
Sbjct: 961 GYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFA 1020
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+S+VY RE + D+NRFHH G+CSC D+W
Sbjct: 1021 KFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 85/191 (44%), Gaps = 25/191 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL LF E+ G ++ T ++L +CT ++G +H ++K + E
Sbjct: 553 YSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESH 612
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G +L +DV++ TA+I A G +AL+ F +Q
Sbjct: 613 IFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQR 672
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G++ + +T+ VL A S +D R H +++ K +++ L+ + + G +
Sbjct: 673 EGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQN--SLIDMYSKCGSL 730
Query: 158 AKAEELIKNMP 168
+ + +MP
Sbjct: 731 TYSRRIFDSMP 741
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 38/189 (20%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+EALL E+ +GL + S+L C A+ G +H +++K E V L L
Sbjct: 462 KEALL---EMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRL 518
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
++V++ TA+I + G ++AL F EM + G P+
Sbjct: 519 IVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNE 578
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYG--IRPSIEHY----GCLVYILGRAGRIAK 159
TF VL +C+ + S F L + + I+ S E + L+ + +AG+I +
Sbjct: 579 FTFATVLTSCTSS-------SGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICE 631
Query: 160 AEELIKNMP 168
A + +P
Sbjct: 632 ARRVFDGLP 640
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 150/399 (37%), Positives = 229/399 (57%), Gaps = 48/399 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + S EAL LF+ ++ G ++++++ L AC LG + G +H YI + +++
Sbjct: 181 FAQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMN 240
Query: 61 VGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ + KD++T +I+ AM G+G KALE F +M
Sbjct: 241 AQVCNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMD 300
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV PD ++++ VL AC+H GLV+E FN M E G++P+++HYG +V +LGRAGR+
Sbjct: 301 QSGVSPDDVSYLAVLCACNHGGLVEEGFRLFNSM-ENCGVKPNVKHYGSVVDLLGRAGRL 359
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A +++ +MP D + LLGA R H N+E AE +++L+E+ ++ G +V+LSN Y
Sbjct: 360 HEAYDIVNSMPTVPDIVLWQTLLGASRTHRNVEIAETVSRKLVEMGSNHCGDFVLLSNVY 419
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
++ +W V R+RE M R++KK PG IE +GV+H+F A
Sbjct: 420 AARERWADVGRVREAMKNRDVKKVPGLSYIEGNGVIHKFYNADKSHESWREIYAKLDEIR 479
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+V S VL D+ EE+KE L H+EKLA+ FGL+S G I++IKNLR+C
Sbjct: 480 FRVKEYGYVAETSFVLHDIGEEDKENVLGHHSEKLAVAFGLISTSEGTPIQVIKNLRICG 539
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH +ISK+Y+RE +V DR RFH FK G CSC+D+W
Sbjct: 540 DCHFVIKLISKIYDREIIVRDRVRFHRFKEGFCSCRDYW 578
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 22/145 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+++ A ++ + K D +T +L AC + A + +H +I++K D
Sbjct: 80 FIQSPNPTNAFAWYKSMISKSRKVDALTCSFVLKACARVLARLESIQIHTHIVRKGFIAD 139
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG L +D+ + ALI A + +AL F M+I
Sbjct: 140 ALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQGSKPTEALSLFKRMEI 199
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE 123
G KP+ I+ +G L AC+ G E
Sbjct: 200 DGFKPNEISVLGALSACAQLGDFKE 224
>gi|226530803|ref|NP_001148047.1| LOC100281656 [Zea mays]
gi|195615502|gb|ACG29581.1| selenium-binding protein-like [Zea mays]
Length = 597
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 165/401 (41%), Positives = 221/401 (55%), Gaps = 49/401 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTG--DKVTMVSLLLACTHLGALEVG--MWL----HPY- 51
Y + ++AL LF E++ K D VT + LL AC+ LGAL+ G +W H Y
Sbjct: 197 YARNRRTKDALKLFEEMRGKDSESEPDDVTCILLLQACSSLGALDFGEQVWAYAEEHGYG 256
Query: 52 --IMKKNIEVDVGL-------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+ +N + + L G K V+T TA+I LA G GN A+ F EM
Sbjct: 257 GELKVRNSLITMYLRCGCVDKAYRVFSGTPQKSVVTWTAMISGLAANGFGNDAISVFEEM 316
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
V PD TF GVL ACSH+GLVDE F++M +YG++P++ HYGC+V ++GRAG
Sbjct: 317 IRSDVAPDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGL 376
Query: 157 IAKAEELIKN-MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSN 215
+ +A E + N M +A D + LLGACRIH +++ ER L+EL G YV+L N
Sbjct: 377 LDEAYEFVTNEMKVAPDATIWRTLLGACRIHGHVDLGERVIGNLIELKAQQAGDYVLLLN 436
Query: 216 RYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK----------------- 258
Y++ +W KV IR+LM E I+ PGC +E +G VHEF+
Sbjct: 437 TYAAVGEWSKVSEIRKLMQEEGIQTTPGCTTVEHNGTVHEFIADDDAHPRKVEIYENLSE 496
Query: 259 -------AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
AG+VPN S L D+D E KE+AL H+EKLAI F L+ IR+ KNLRV
Sbjct: 497 IYKQLRIAGYVPNVSSELHDLDSEGKESALTYHSEKLAIAFALLVTPQHRPIRLAKNLRV 556
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH T + S +Y R +V DR RFHHF+ G CSC D+W
Sbjct: 557 CVDCHNFTKMFSAIYRRIVIVRDRTRFHHFQGGKCSCNDYW 597
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 158/394 (40%), Positives = 227/394 (57%), Gaps = 42/394 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWL-----------H 49
Y ++ L L++E++ KG D +T+V +L +C HLGAL VG + +
Sbjct: 189 YAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSN 248
Query: 50 PYIMKKNIEV-----------DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
P++ + + D+ GM +K V++ TA+I M GQG A+ F EM
Sbjct: 249 PFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIR 308
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD FV VL ACSHAGL ++ + +F +M KYG+RP EHY C+V +LGRAGR+
Sbjct: 309 GGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLN 368
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A ELI++M + D + G LLGAC+IH N+E AE A +Q++EL P N G YV+LSN Y+
Sbjct: 369 EARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPTNTGYYVLLSNVYT 428
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFV-PNKSEVLFDMDE--- 274
+ + + R+R LM +R +KK PGC +E G VH F P +E+ ++E
Sbjct: 429 EAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHPQTNEIYKKLNELEN 488
Query: 275 -------------EEKETALN---LHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTA 318
E +E LN +H+EKLA+ F L++ I IIKNLR+C DCH
Sbjct: 489 LVKDLDGCKKNDHERREEYLNSMGVHSEKLAVAFALLNTRKETEIIIIKNLRICGDCHLF 548
Query: 319 TNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
++SK+ +R+ VV D RFHHFKNG CSCK++W
Sbjct: 549 IKLVSKIVDRQFVVRDATRFHHFKNGFCSCKEYW 582
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 35/197 (17%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y +S ++ ++LF E++ G+ + VTM+ L+ C G L +GM +H + +K +++D
Sbjct: 88 YALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMD 147
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G M K ++T A+I A G N LE + EM+
Sbjct: 148 SSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMES 207
Query: 99 RGVKPDAITFVGVLVACSHAGL------VDERISHFNLMSEKYGIRPSIEHYGCLVYILG 152
+G PD +T VGVL +C+H G V+ ++ F S P + + LV +
Sbjct: 208 KGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSN-----PFLNN--ALVNMYA 260
Query: 153 RAGRIAKAEELIKNMPM 169
R G + KA ++ MP+
Sbjct: 261 RCGNLKKARDIFDGMPV 277
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 157/398 (39%), Positives = 217/398 (54%), Gaps = 47/398 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
++ E+AL LF ++Q +G+ + VT VSL+ +C HLG+L+ G +H ++ + D+
Sbjct: 408 AQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDI 467
Query: 62 -----------------------GLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
G KDV+ ++I M G G +A+ +++M
Sbjct: 468 VNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIE 527
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KP+ TF+ +L ACSH+ LV++ IS FN M + IRP +HY CLV +L RAGR
Sbjct: 528 EGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFE 587
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A+ LI+ MP VL LL CR H N+ + + +LL L N G Y++LSN Y+
Sbjct: 588 EAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYA 647
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+R+W KV IR LM R +KK PG L+E VH F
Sbjct: 648 EARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESLRS 707
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+G+VP+ S VL D+DEE K L H+E+LAI FGL++ G LIRI KNLRVC D
Sbjct: 708 AVETSGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPAGSLIRITKNLRVCGD 767
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHT T ISK+ RE +V D NRFHHF NG CSC D+W
Sbjct: 768 CHTVTKYISKIVKREIIVRDANRFHHFSNGECSCGDYW 805
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 27/244 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V + E+ LF + D T+VSLL C+ +L G LH ++ + E ++
Sbjct: 308 VRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIR-SFESNL 366
Query: 62 GLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
L A+ D V+T TA++V LA G AL F +MQ
Sbjct: 367 ILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEE 426
Query: 100 GVKPDAITFVGVLVACSHAG-LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ +++TFV ++ +C+H G L R H +L + G I + LV + + G+I
Sbjct: 427 GIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLF--RLGFAFDIVNMTALVDMYAKCGKIN 484
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLEL-LPDNGGSYVILSNRY 217
AE + + ++ D + ++ +H + A +++E L N +++ L +
Sbjct: 485 LAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSAC 544
Query: 218 SSSR 221
S SR
Sbjct: 545 SHSR 548
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ + A LF E+ G+ +TM SL+ AC +G L++G +H Y++
Sbjct: 206 YVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVL------- 258
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
GLG+ D++ LT+ + + + G A FY+M R + +++ ++ C GL
Sbjct: 259 -GLGLG-NDILVLTSFVDMYSKMGDIESARWVFYKMPTRNL----VSWNAMISGCVRNGL 312
Query: 121 VDERISHFNLMSEKYG 136
V E F+ + G
Sbjct: 313 VGESFDLFHRLVRSSG 328
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 56/141 (39%), Gaps = 22/141 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y++ E L LF ++ + L D + L AC E+GM + ++K +E +
Sbjct: 105 YLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKN 164
Query: 61 ----------------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V GM KDV+ ++I G + A + F+EM
Sbjct: 165 RFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHG 224
Query: 99 RGVKPDAITFVGVLVACSHAG 119
G+KP IT ++ AC G
Sbjct: 225 SGIKPSPITMTSLIQACGGIG 245
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 154/391 (39%), Positives = 223/391 (57%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E+AL LF + + +VT S L AC L ALE G+ +H +K + D+ + AL
Sbjct: 221 EKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNAL 280
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+D ++ A+I +M G G +AL F +MQ VKPD
Sbjct: 281 IDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDK 340
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TFVGVL AC++AGL+D+ ++F M + +GI P IEHY C+V++LGR G + KA +LI
Sbjct: 341 LTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLID 400
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+P V LLGAC IH+++E +AQ++LE+ P + ++V+LSN Y+++++W
Sbjct: 401 EIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDN 460
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
V +R+ M + +KK PG IE G VH F KAG+
Sbjct: 461 VASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGY 520
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
+PN + VL D+++EEKE L +H+E+LA++FG++ G IRI+KNLR+C DCH A
Sbjct: 521 IPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKC 580
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISKV RE VV D NRFHHF+ G CSC D+W
Sbjct: 581 ISKVVQREIVVRDINRFHHFQEGLCSCGDYW 611
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 23/138 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E EA+ LF + H+ + ++ T S+L AC + L +G +H +++K + D
Sbjct: 114 YAESVRFLEAIELFVRL-HREVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSD 172
Query: 61 VGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL DV +T +IV G G KAL F M
Sbjct: 173 VFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLE 232
Query: 99 RGVKPDAITFVGVLVACS 116
V+ +T+ L AC+
Sbjct: 233 YRVQATEVTYSSALRACA 250
>gi|414870414|tpg|DAA48971.1| TPA: selenium-binding protein-like protein [Zea mays]
Length = 611
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 165/401 (41%), Positives = 221/401 (55%), Gaps = 49/401 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTG--DKVTMVSLLLACTHLGALEVG--MWL----HPY- 51
Y + ++AL LF E++ K D VT + LL AC+ LGAL+ G +W H Y
Sbjct: 211 YARNRRTKDALKLFEEMRGKDSESEPDDVTCILLLQACSSLGALDFGEQVWAYAEEHGYG 270
Query: 52 --IMKKNIEVDVGL-------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+ +N + + L G K V+T TA+I LA G GN A+ F EM
Sbjct: 271 GELKVRNSLITMYLRCGCVDKAYRVFSGTPQKSVVTWTAMISGLAANGFGNDAISVFEEM 330
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
V PD TF GVL ACSH+GLVDE F++M +YG++P++ HYGC+V ++GRAG
Sbjct: 331 IRSDVAPDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGL 390
Query: 157 IAKAEELIKN-MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSN 215
+ +A E + N M +A D + LLGACRIH +++ ER L+EL G YV+L N
Sbjct: 391 LDEAYEFVTNEMKVAPDATIWRTLLGACRIHGHVDLGERVIGNLIELKAQQAGDYVLLLN 450
Query: 216 RYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK----------------- 258
Y++ +W KV IR+LM E I+ PGC +E +G VHEF+
Sbjct: 451 TYAAVGEWSKVSEIRKLMQEEGIQTTPGCTTVEHNGTVHEFIADDDAHPRKVEIYENLSE 510
Query: 259 -------AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
AG+VPN S L D+D E KE+AL H+EKLAI F L+ IR+ KNLRV
Sbjct: 511 IYKQLRIAGYVPNVSSELHDLDSEGKESALTYHSEKLAIAFALLVTPQHRPIRLAKNLRV 570
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH T + S +Y R +V DR RFHHF+ G CSC D+W
Sbjct: 571 CVDCHNFTKMFSAIYRRIVIVRDRTRFHHFQGGKCSCNDYW 611
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 152/391 (38%), Positives = 215/391 (54%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL----- 63
EA+ FR +Q KG+ VT+ ++L C + AL G +H I+K + D +
Sbjct: 262 EAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLV 321
Query: 64 -----------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
GM KD+ + LI A+ G+ +A+E F EM G PD I
Sbjct: 322 DMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGI 381
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF+ +L CSHAGL D+ F +M YGI P++EHY CLV +LGRAGRI +A E++KN
Sbjct: 382 TFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRAGRIKEALEIVKN 441
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP + G LL +CR+H N+ AE A++L EL P+N G+YV+LSN Y+++ W+ V
Sbjct: 442 MPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESV 501
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------------KAGF 261
K +RE M +R + K GC +++ +H FV + G+
Sbjct: 502 KVVREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEFRNSVEYKKVWKRLMEAMEEVGY 561
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ VL D+ EE + + H+E+LA F L++ G+ IRI KNLRVC DCH+
Sbjct: 562 VPDTGVVLHDVSEEMRAMWVCGHSERLATMFALINTASGMPIRITKNLRVCVDCHSWVKT 621
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+SKV R V+ D NRFHHFK+G CSCKD+W
Sbjct: 622 LSKVTGRVIVLRDTNRFHHFKDGVCSCKDYW 652
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 286 bits (733), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 158/397 (39%), Positives = 219/397 (55%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
++ + EEAL +FR + G+ VT SL+ C +L +L G LH Y++ E +V
Sbjct: 247 AQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNV 306
Query: 62 GLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ M+ DV++ TA+I+ A+ G +AL F M++
Sbjct: 307 FISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELG 366
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
KP+ ITF+ VL ACSHAGLVD+ +F MS YGI P++EH+ L LGRAG + +
Sbjct: 367 NAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDE 426
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A I M + V LL ACR+H N AE A++++EL P + GS+V+LSN YS+
Sbjct: 427 AYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSA 486
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
S +W + +RE M ++ +KK P C IEV +H FV
Sbjct: 487 SGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQ 546
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+ G VPN +V D++EE K L H+EKLAI FG++S G IR++KNLRVC DC
Sbjct: 547 MAREGHVPNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDC 606
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
HT T ISK+ +RE VV D NRFHHFK+G+CSC DFW
Sbjct: 607 HTVTKFISKLADREIVVRDANRFHHFKDGNCSCGDFW 643
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 286 bits (733), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 148/397 (37%), Positives = 223/397 (56%), Gaps = 53/397 (13%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V++ +E L FR++ + + S++ AC HL L +G LH YI + + ++
Sbjct: 316 VQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENI 375
Query: 62 GLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ M L+D+++ TA+I+ A+ GQ A+E F +M+
Sbjct: 376 FIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETE 435
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G+K VL ACSH GLVDE +FN M+ +GI P +EHY + +LGRAGR+ +
Sbjct: 436 GIK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEE 488
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A + I M + + LL ACR+H N++ AE+ A ++LE+ P+N G+Y++L+N YS+
Sbjct: 489 AYDFICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRILEVDPNNTGAYILLANIYSA 548
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
+R+WK+ + R M I+K P C IEV V+ F+
Sbjct: 549 ARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVEL 608
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
K G+VP+ SEV D++EE+K+ + H+E+LAI FG+++ G+ IR+ KNLRVC DC
Sbjct: 609 MEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDC 668
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
HTAT ISK+ RE VV D +RFHHFKNG+CSC D+W
Sbjct: 669 HTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 705
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/218 (18%), Positives = 84/218 (38%), Gaps = 32/218 (14%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EE L + RE+ L D T+ S+L + G +H +++ ++ D+ + +L
Sbjct: 221 EETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSL 280
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+D ++ ++I G ++ L +F +M + +KP +
Sbjct: 281 IDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKS 340
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKY----GIRPSIEHYGCLVYILGRAGRIAKAE 161
+F ++ AC+H + H Y G +I LV + + G I A+
Sbjct: 341 YSFSSIMPACAHLTTL-----HLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAK 395
Query: 162 ELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQL 199
++ M + D ++ C +H A +Q+
Sbjct: 396 QIFDRMRLR-DMVSWTAMIMGCALHGQAPDAIELFEQM 432
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 286 bits (733), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 152/398 (38%), Positives = 226/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL LFRE+Q + ++ D T+ S++ C LGAL++G W+H Y+ K+ +++D
Sbjct: 183 YAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKID 242
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL +DV + +I A+ G G KAL+ F M+
Sbjct: 243 VVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKR 302
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
P+ +TF VL ACSH+GLV++ F M +Y I P I+HYGC+V + RAG +
Sbjct: 303 SKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVG 362
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A + I+ MP+ + + LLGAC+ H + E ++++L+L P + +YV++SN Y+
Sbjct: 363 HAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVYA 422
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S +W V ++R LM ++ KK G IE++ +VH+F+
Sbjct: 423 SLGRWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQMAR 482
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G V + +VL D+DEEEKE AL LH+E+LAI +GL+ G IRI+KNLRVC D
Sbjct: 483 KLKQVGHVNSTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRVCRD 542
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH +IS+VYNRE +V DR RFHHF+ CSC D+W
Sbjct: 543 CHEVIKLISEVYNREIIVRDRVRFHHFRERGCSCNDYW 580
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 23/180 (12%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL------ 63
A+ L+R++ G++ + T +L AC L L G LH I+K ++ + L
Sbjct: 91 AIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIK 150
Query: 64 ----------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
M D + + ++ A GQ +AL+ F EMQ V DA T
Sbjct: 151 LYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFT 210
Query: 108 FVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
V+ C G +D + M +K G++ + LV + + G + A ++ + M
Sbjct: 211 LASVVGVCGDLGALDLGKWVHSYM-DKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGM 269
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 160/390 (41%), Positives = 226/390 (57%), Gaps = 47/390 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LFRE+Q G+ D+VTMVS++ AC GAL++G W+H YI +K I VD+ L AL
Sbjct: 260 EALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALI 319
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
KD +A+IV A+ G AL F M V+P+ +
Sbjct: 320 DMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNV 379
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF+GVL AC+H+GLV++ ++++M + GI+PS+E+YGC+V +L R+G + A +
Sbjct: 380 TFIGVLSACAHSGLVEDGRRYWSIM-QNLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIG 438
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP++ + + LL AC+ + ++ AE A ++LLEL P N +YV+LSN Y+S+ +W +V
Sbjct: 439 MPVSPNSVIWRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRV 498
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGFV 262
+R M +N+ G IE++G +HEFV +AG
Sbjct: 499 SYLRRKMKGKNVTAIAGRSSIEINGHLHEFVVSDDSHPEIREIRLVLREMADRVRRAGHK 558
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P + VL D+ EEEKE AL H+E+LAI +GL+ +IR++KNLR C DCH II
Sbjct: 559 PWTAAVLHDVGEEEKEAALCQHSERLAIAYGLLKTRAPHVIRVVKNLRFCLDCHEVAKII 618
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SK YNRE VV DR RFH F GSCSCKDFW
Sbjct: 619 SKAYNREIVVRDRVRFHKFMGGSCSCKDFW 648
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 30/224 (13%)
Query: 10 ALLLFREVQHKGLT-GDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE----VDVGL- 63
AL ++R + G + T+ L AC + A G LH +++ + V GL
Sbjct: 158 ALAVYRRMLRAGSPRPNSFTLAFALKACAAVPAPGEGRQLHAQALRQGLATSAYVQTGLL 217
Query: 64 -----------------GMA-LKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
GMA K+++ +A++ + G N+AL F EMQ GV+PD
Sbjct: 218 NLYAKCEQVALARTVFDGMAGDKNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDE 277
Query: 106 ITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+T V V+ AC+ AG +D + H + ++ GI +E L+ + + G I +A +
Sbjct: 278 VTMVSVISACAKAGALDLGKWVHAYI--DRKGITVDLELSTALIDMYAKCGLIERARGVF 335
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLEL--LPDN 206
M + D ++ IH +E A ++LEL P+N
Sbjct: 336 DAM-VEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNN 378
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 160/390 (41%), Positives = 226/390 (57%), Gaps = 47/390 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LFRE+Q G+ D+VTMVS++ AC GAL++G W+H YI +K I VD+ L AL
Sbjct: 211 EALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTALI 270
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
KD +A+IV A+ G AL F M V+P+ +
Sbjct: 271 DMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNV 330
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF+GVL AC+H+GLV++ ++++M + GI+PS+E+YGC+V +L R+G + A +
Sbjct: 331 TFIGVLSACAHSGLVEDGRRYWSIM-QNLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIG 389
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP++ + + LL AC+ + ++ AE A ++LLEL P N +YV+LSN Y+S+ +W +V
Sbjct: 390 MPVSPNSVIWRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRV 449
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGFV 262
+R M +N+ G IE++G +HEFV +AG
Sbjct: 450 SYLRRKMKGKNVTAIAGRSSIEINGHLHEFVVSDDSHPEIREIRLVLREMADRVRRAGHK 509
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P + VL D+ EEEKE AL H+E+LAI +GL+ +IR++KNLR C DCH II
Sbjct: 510 PWTAAVLHDVGEEEKEAALCQHSERLAIAYGLLKTRAPHVIRVVKNLRFCLDCHEVAKII 569
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SK YNRE VV DR RFH F GSCSCKDFW
Sbjct: 570 SKAYNREIVVRDRVRFHKFMGGSCSCKDFW 599
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 30/224 (13%)
Query: 10 ALLLFREVQHKGLT-GDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE----VDVGL- 63
AL ++R + G + T+ L AC + A G LH +++ + V GL
Sbjct: 109 ALAVYRRMLRAGSPRPNSFTLAFALKACAAVPAPGEGRQLHAQALRQGLATSAYVQTGLL 168
Query: 64 -----------------GMA-LKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
GMA K+++ +A++ + G N+AL F EMQ GV+PD
Sbjct: 169 NLYAKCEQVALARTVFDGMAGDKNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDE 228
Query: 106 ITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+T V V+ AC+ AG +D + H + ++ GI +E L+ + + G I +A +
Sbjct: 229 VTMVSVISACAKAGALDLGKWVHAYI--DRKGITVDLELSTALIDMYAKCGLIERARGVF 286
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLEL--LPDN 206
M + D ++ IH +E A ++LEL P+N
Sbjct: 287 DAM-VEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNN 329
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 224/398 (56%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++S EAL LF ++ + + D T+ +L AC L +L+ G +H +I++ D
Sbjct: 175 YSKNSLPNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSD 233
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL KD++T T +I M G GN A+ F EM+
Sbjct: 234 QQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQ 293
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD ++F+ +L ACSH+GL+DE FN+M ++ ++P +EHY C+V +L R+G++A
Sbjct: 294 AGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLA 353
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A + IK+MP+ D + G LL CRIH +++ AE+ A+ + EL P+N G YV+L+N Y+
Sbjct: 354 MAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYA 413
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ KW++VK++R+ + R +KK PGC IEV VH F+
Sbjct: 414 EAEKWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRS 473
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G+ P L + D +KETAL H+EKLA+ FG+++ P IR+ KNLRVC D
Sbjct: 474 KMKEEGYFPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGD 533
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH ISK RE V+ D NRFHHFK+G C C+ FW
Sbjct: 534 CHEMAKFISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 23/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI----MKKN 56
Y + +EA+ LF E+ +G++ D T+ ++L AC G+LE G +H YI M+ N
Sbjct: 74 YAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSN 133
Query: 57 IEV------------------DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
I V V L M +KD+++ +I + N+AL F +M +
Sbjct: 134 IFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVL 193
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
+KPD T +L AC+ +D
Sbjct: 194 E-MKPDGTTLACILPACASLASLD 216
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 23/163 (14%)
Query: 29 MVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG----------------------MA 66
MVS+L AC + G + +G +H +K + M+
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 67 LKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERIS 126
++ V+T T+LI A G ++A+ F+EM GV PD T VL AC+ G ++
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 127 HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPM 169
N + E ++ +I L+ + + G + A + MP+
Sbjct: 121 VHNYIREN-DMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPV 162
>gi|357487543|ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
gi|355515394|gb|AES97017.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
Length = 565
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/395 (38%), Positives = 232/395 (58%), Gaps = 54/395 (13%)
Query: 11 LLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK---NIEVDVGL---- 63
L++F E+ K D TM S++ AC LG+L +GMW+H +++KK N+ DV +
Sbjct: 172 LIMFCEMM-KVYEPDCYTMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVVCDVLVNTCL 230
Query: 64 ------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEM-QIRGVKPD 104
GM+ +DV + ++I+ A+ G+ AL+YF M ++ + P+
Sbjct: 231 VDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHGKAKAALDYFVRMVKVEKIVPN 290
Query: 105 AITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+ITFVGVL AC+H+G+VDE + +F +M+++Y + PS+ HYGCLV + RAG I +A ++
Sbjct: 291 SITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGHIQEALNVV 350
Query: 165 KNMPMALDHFVLGGLLGAC-RIHDNLEAAERAAQQLLELLPD-NGGSYVILSNRYSSSRK 222
MP+ D + LL AC + H ++E +E A+Q+ E GG+YV+LS Y+S+ +
Sbjct: 351 SEMPIKPDAVIWRSLLDACYKQHASVELSEEMAKQIFESNGSVCGGAYVLLSKVYASASR 410
Query: 223 WKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------K 258
W V +R+LM ++ + K PGC LIE++G HEF
Sbjct: 411 WNDVGLLRKLMNDKGVSKKPGCSLIEINGAAHEFFAGDTNHPQSKDIYKFMNEIQEKLES 470
Query: 259 AGFVPNKSEV-LFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHT 317
G++P+ S L D E K+ + LH+E+LAI FGL++ P + IR+ KNLRVCNDCH
Sbjct: 471 VGYLPDYSGAPLIDEINEGKQNTMRLHSERLAIAFGLLNSKPSMPIRVFKNLRVCNDCHK 530
Query: 318 ATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
T +IS++YN E +V DR RFHHFK+GSCSC D+W
Sbjct: 531 VTKLISRIYNVEIIVRDRVRFHHFKDGSCSCMDYW 565
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 222/399 (55%), Gaps = 48/399 (12%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V++ ++ L FR + + + +V+ S++ AC HL AL +G LH YI++ + +
Sbjct: 276 VQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNK 335
Query: 62 GLGMAL------------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ +L +D+++ TA+I+ AM G A+ F EM
Sbjct: 336 FIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEML 395
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+ GVKP + F+ VL ACSHAGLVDE +FN M +G+ P +EHY + +LGRAGR+
Sbjct: 396 VDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRL 455
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A + I NM V LL ACR H N+E AE+ ++L + P N G++VI+SN Y
Sbjct: 456 EEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIY 515
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
S++++W+ ++R M + +KK P C IEV VH F+
Sbjct: 516 SAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILL 575
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
K G+V + +EVL D+DEE K L H+E+LAI FG++S G IR+IKN+RVC
Sbjct: 576 EQMEKEGYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTIRVIKNIRVCV 635
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTA ++K+ RE +V D +RFHHFKNGSCSC D+W
Sbjct: 636 DCHTAIKFMAKIVGREIIVRDNSRFHHFKNGSCSCGDYW 674
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 22/132 (16%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEAL + +E+ + L D T+ S+L T + G +H Y ++ + DV +G +L
Sbjct: 181 EEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSL 240
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+D ++ ++I G+ ++ L +F M VKP
Sbjct: 241 IDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQ 300
Query: 106 ITFVGVLVACSH 117
++F V+ AC+H
Sbjct: 301 VSFSSVIPACAH 312
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 156/374 (41%), Positives = 211/374 (56%), Gaps = 46/374 (12%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI------------------EVDVGLG-- 64
+ +TMVS+L AC L ALE G +H Y++++ + E+ G
Sbjct: 281 NPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVF 340
Query: 65 --MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
M +DV++ +LI + M G G KA++ F M RGV P ITF+ VL ACSHAGLV+
Sbjct: 341 DYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVE 400
Query: 123 ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGA 182
E F M KY I P +EHY C+V ILGRA R+ +A ELI+NM V G LLG+
Sbjct: 401 EAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGS 460
Query: 183 CRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPP 242
CRIH N+E AERA+ L EL P N G+YV+LS+ Y+ SR W V+R+R+ + R ++K P
Sbjct: 461 CRIHCNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGLQKIP 520
Query: 243 GCILIEVDGVVHEFVK------------------------AGFVPNKSEVLFDMDEEEKE 278
C IEV ++ V G+VP + V +D+DEEEKE
Sbjct: 521 SCSWIEVKRKIYSLVSIEEYNPQIEELCAFLITLLTEIKNQGYVPQTNVVTYDLDEEEKE 580
Query: 279 TALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRF 338
+ H+ KLA+ FGL++ G +IRI NLR+C DCH +SK NRE ++ D NRF
Sbjct: 581 RIVLGHSGKLAVAFGLINTSKGEIIRISNNLRLCEDCHAFMKFVSKFTNREILLRDVNRF 640
Query: 339 HHFKNGSCSCKDFW 352
H FK+G CSC D+W
Sbjct: 641 HCFKDGVCSCGDYW 654
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 151/391 (38%), Positives = 219/391 (56%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E+A+ LF E+ KGL D + SLL AC L A E G +H +++K+ DV G AL
Sbjct: 487 EDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNAL 546
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
K V++ +A+I LA G G +AL+ F+ M + P+
Sbjct: 547 VYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNH 606
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
IT VL AC+HAGLVDE +FN M E +GI + EHY C++ +LGRAG++ A EL+
Sbjct: 607 ITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVN 666
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MP + V G LL A R+H + E AA++L L P+ G++V+L+N Y+S+ W
Sbjct: 667 SMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDD 726
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
V ++R+LM + +KK P +E+ VH F+ KAG+
Sbjct: 727 VAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDELGDLMTKAGY 786
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VPN L D+D+ EKE L+ H+E+LA+ F L+S G IR+ KNLR+C DCH A
Sbjct: 787 VPNVEVDLHDVDKNEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHAAFKF 846
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS + +RE ++ D NRFHHF++G+CSC+D+W
Sbjct: 847 ISDIVSREIIIRDINRFHHFRDGACSCRDYW 877
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 29/159 (18%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ C A+ +F E+ G+ ++ ++ ACT LE G +H +++ + D
Sbjct: 177 YVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKD 236
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V AL DV++ A I + G ALE +M+
Sbjct: 237 VFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKS 296
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGI 137
G+ P+ T +L AC+ +G FNL + +G
Sbjct: 297 SGLVPNVFTLSSILKACAGSGA-------FNLGRQIHGF 328
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 73/183 (39%), Gaps = 25/183 (13%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LF ++ +G ++ T+ ++L + L A+ +H K D + L
Sbjct: 387 EALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLI 446
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
D++ T++I L+ C G A++ F EM +G+ PD
Sbjct: 447 DSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPF 506
Query: 107 TFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+L AC+ ++ + H +L+ ++ + LVY + G I A+
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQF--MSDVFAGNALVYTYAKCGSIEDADLAFS 564
Query: 166 NMP 168
+P
Sbjct: 565 GLP 567
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/401 (39%), Positives = 220/401 (54%), Gaps = 49/401 (12%)
Query: 1 YVEDSACEEALLLFREV--QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK---- 54
Y + +AL LF ++ Q L + T+ L+AC LG L +G LH Y ++
Sbjct: 455 YAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENE 514
Query: 55 ---------------KNIEVDVGLG----MALKDVMTLTALIVVLAMCGQGNKALEYFYE 95
K+ ++D M L++V++ T+L+ M G+G +AL F +
Sbjct: 515 SEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQ 574
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
MQ G D ITF+ VL ACSH+G+VD+ + +F+ M + +GI P EHY C+V +LGRAG
Sbjct: 575 MQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAG 634
Query: 156 RIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSN 215
R+ +A ELIKNM M V LL A RIH N+E E AA +L EL +N GSY +LSN
Sbjct: 635 RLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSN 694
Query: 216 RYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------ 257
Y+++R+WK V RIR LM I+K PGC I+ F
Sbjct: 695 LYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLD 754
Query: 258 ------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
G+VP S L D+D+EEK L H+EKLA+ +G+++ PG IRI KNLR+
Sbjct: 755 LIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLRI 814
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH+A IS + + E V+ D +RFHHFK GSCSC+ +W
Sbjct: 815 CGDCHSALTYISMIIDHEIVLRDSSRFHHFKKGSCSCRSYW 855
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 39/205 (19%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------ 54
Y + EAL +FR++Q GL + VT+ SLL C +GAL G H Y++K
Sbjct: 345 YAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLN 404
Query: 55 ---------------------KNIEVDVGLGMAL----KDVMTLTALIVVLAMCGQGNKA 89
K+ V + ++ K+V+T T +I A G+ N A
Sbjct: 405 WNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDA 464
Query: 90 LEYFYEM--QIRGVKPDAITFVGVLVACSHAG--LVDERISHFNLMSEKYGIRPSIEHYG 145
L+ F ++ Q +KP+A T L+AC+ G + ++ + L +E + + G
Sbjct: 465 LKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNEN---ESEVLYVG 521
Query: 146 -CLVYILGRAGRIAKAEELIKNMPM 169
CL+ + ++G I A + NM +
Sbjct: 522 NCLIDMYSKSGDIDAARAVFDNMKL 546
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 26/166 (15%)
Query: 1 YVEDSACEEAL-LLFREVQHKGLT--GDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI 57
YV+ AL + FR H L D +T+V++L AC + AL+ G +H + ++ +
Sbjct: 206 YVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGL 265
Query: 58 EVDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYE 95
DV +G AL KDV++ A++ + G + AL F
Sbjct: 266 VDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKM 325
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSI 141
MQ +K D IT+ V+ + G E + F M + YG+ P++
Sbjct: 326 MQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQM-QLYGLEPNV 370
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 62/119 (52%), Gaps = 13/119 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + S EA +F ++ K D V+ +++ + +G+ + + L + +++I++D
Sbjct: 279 YAKCSKMNEANKVFEGIKKK----DVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLD 334
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
V +T +A+I A G G +AL+ F +MQ+ G++P+ +T +L C+ G
Sbjct: 335 V---------ITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVG 384
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/374 (41%), Positives = 217/374 (58%), Gaps = 46/374 (12%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----------------- 67
+ VTMV++L AC L ALE G +H YI+++ ++ + + AL
Sbjct: 285 NSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVF 344
Query: 68 -----KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
+DV++ +LI + M G G KA++ F M +G P I+F+ VL ACSHAGLV+
Sbjct: 345 DNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVE 404
Query: 123 ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGA 182
E F M KY I P +EHY C+V +LGRA R+ +A +LI++M V G LLG+
Sbjct: 405 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLGS 464
Query: 183 CRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPP 242
CRIH N+E AERA+ L EL P N G+YV+L++ Y+ ++ W + K + +L+ R ++K P
Sbjct: 465 CRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAKSVMKLLEARGLQKLP 524
Query: 243 GCILIEVDGVVHEFVKA------------------------GFVPNKSEVLFDMDEEEKE 278
GC IEV V+ FV G+VP + VL+D+DEEEKE
Sbjct: 525 GCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKE 584
Query: 279 TALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRF 338
+ H+EKLA+ FGL++ + G IRI KNLR+C DCH T ISK NRE +V D NRF
Sbjct: 585 RIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVNRF 644
Query: 339 HHFKNGSCSCKDFW 352
HHFK+G CSC D+W
Sbjct: 645 HHFKDGVCSCGDYW 658
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/394 (38%), Positives = 224/394 (56%), Gaps = 50/394 (12%)
Query: 9 EALLLFREV--QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------------ 54
+AL LF E+ + G+ + T+ +L+AC HL A+ +G +H Y+++
Sbjct: 352 DALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVA 411
Query: 55 --------KNIEVDVGL----GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVK 102
K +VD M+ K ++ T+++ M G+G++AL+ F +M+ G
Sbjct: 412 NCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFV 471
Query: 103 PDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE 162
PD ITF+ VL ACSH G+VD+ +S+F+ MS YG+ P EHY + +L R GR+ KA +
Sbjct: 472 PDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWK 531
Query: 163 LIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRK 222
+K+MPM V LL ACR+H N+E AE A +L+E+ +N GSY ++SN Y+++ +
Sbjct: 532 TVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGR 591
Query: 223 WKKVKRIRELMAERNIKKPPGCILIE------------------------VDGVVHEFVK 258
WK V RIR LM + IKK PGC ++ ++ ++
Sbjct: 592 WKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKA 651
Query: 259 AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTA 318
G+VP + L D+DEEEK L H+EKLA+ +GL++ PG IRI KNLRVC DCH+A
Sbjct: 652 MGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSA 711
Query: 319 TNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISK+ + E VV D +RFHHFKNGSCSC +W
Sbjct: 712 FTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 745
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 43/207 (20%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN-IEV 59
Y + EAL +FR++ G + VT++S+L AC LGA GM +H Y +K + +
Sbjct: 231 YSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTL 290
Query: 60 DVGLGMALKDVMTLTALIVVLAMC---------------------------------GQG 86
D G +D+M ALI + + C G
Sbjct: 291 DNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDS 350
Query: 87 NKALEYFYEM--QIRGVKPDAITFVGVLVACSH--AGLVDERISHFNLMSEKYGIRPSIE 142
N AL+ F EM + GV P+A T +L+AC+H A + ++I + L +Y S
Sbjct: 351 NDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQY---DSSA 407
Query: 143 HY--GCLVYILGRAGRIAKAEELIKNM 167
++ CL+ + + G + A + +M
Sbjct: 408 YFVANCLINMYSKCGDVDTARHVFDSM 434
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 28/159 (17%)
Query: 1 YVEDSACEEALLLFRE---VQHKGLT---GDKVTMVSLLLACTHLGALEVGMWLHPYIMK 54
+V+ S AL LF + + H+ T D +++V++L AC L A+ +H ++
Sbjct: 89 HVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIR 148
Query: 55 KNIEVDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEY 92
+DV +G AL KDV++ A++ + G A E
Sbjct: 149 NGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFEL 208
Query: 93 FYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLM 131
F M+ + D +T+ V+ S G E ++ F M
Sbjct: 209 FKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQM 247
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/395 (38%), Positives = 224/395 (56%), Gaps = 50/395 (12%)
Query: 8 EEALLLFREV--QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----------- 54
+AL LF E+ + G+ + T+ +L+AC HL A+ +G +H Y+++
Sbjct: 458 NDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFV 517
Query: 55 ---------KNIEVDVGL----GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV 101
K +VD M+ K ++ T+++ M G+G++AL+ F +M+ G
Sbjct: 518 ANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGF 577
Query: 102 KPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAE 161
PD ITF+ VL ACSH G+VD+ +S+F+ MS YG+ P EHY + +L R GR+ KA
Sbjct: 578 VPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAW 637
Query: 162 ELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSR 221
+ +K+MPM V LL ACR+H N+E AE A +L+E+ +N GSY ++SN Y+++
Sbjct: 638 KTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAG 697
Query: 222 KWKKVKRIRELMAERNIKKPPGCILIE------------------------VDGVVHEFV 257
+WK V RIR LM + IKK PGC ++ ++ ++
Sbjct: 698 RWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIK 757
Query: 258 KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHT 317
G+VP + L D+DEEEK L H+EKLA+ +GL++ PG IRI KNLRVC DCH+
Sbjct: 758 AMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHS 817
Query: 318 ATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
A ISK+ + E VV D +RFHHFKNGSCSC +W
Sbjct: 818 AFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 852
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 43/207 (20%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN-IEV 59
Y + EAL +FR++ G + VT++S+L AC LGA GM +H Y +K + +
Sbjct: 338 YSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTL 397
Query: 60 DVGLGMALKDVMTLTALIVVLAMC---------------------------------GQG 86
D G +D+M ALI + + C G
Sbjct: 398 DNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDS 457
Query: 87 NKALEYFYEM--QIRGVKPDAITFVGVLVACSH--AGLVDERISHFNLMSEKYGIRPSIE 142
N AL+ F EM + GV P+A T +L+AC+H A + ++I + L +Y S
Sbjct: 458 NDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYD---SSA 514
Query: 143 HY--GCLVYILGRAGRIAKAEELIKNM 167
++ CL+ + + G + A + +M
Sbjct: 515 YFVANCLINMYSKCGDVDTARHVFDSM 541
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 28/159 (17%)
Query: 1 YVEDSACEEALLLFRE---VQHKGLT---GDKVTMVSLLLACTHLGALEVGMWLHPYIMK 54
+V+ S AL LF + + H+ T D +++V++L AC L A+ +H ++
Sbjct: 196 HVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIR 255
Query: 55 KNIEVDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEY 92
+DV +G AL KDV++ A++ + G A E
Sbjct: 256 NGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFEL 315
Query: 93 FYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLM 131
F M+ + D +T+ V+ S G E ++ F M
Sbjct: 316 FKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQM 354
>gi|296085509|emb|CBI29241.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/308 (45%), Positives = 199/308 (64%), Gaps = 25/308 (8%)
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHF 128
+ +TL + L MC L++F +M+ GV P +T++G+L ACSHAGLV+E F
Sbjct: 208 NYVTLVRTTLGLMMC-LAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFF 266
Query: 129 NLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDN 188
+ M G+ P IEHYGC+V +LGRAG + ++EELI NMP+ D + LLGAC++H N
Sbjct: 267 DHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGN 326
Query: 189 LEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIE 248
+E +R A+ L+EL P + GSYV LSN Y+S W+ V ++R +M E +++K PGC IE
Sbjct: 327 VEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWIE 386
Query: 249 VDGVVHEF------------------------VKAGFVPNKSEVLFDMDEEEKETALNLH 284
+DGV+HEF + G+ PN ++VL +MDEE+KE++LN H
Sbjct: 387 LDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNLILVGYRPNTTQVLTNMDEEDKESSLNYH 446
Query: 285 TEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNG 344
+EK+AI FGL+S P +RI KNLR+C DCH++ +ISK+Y R+ +V DR RFHHF NG
Sbjct: 447 SEKIAIAFGLISTQPQTPLRITKNLRICEDCHSSIKLISKIYKRKIIVRDRKRFHHFVNG 506
Query: 345 SCSCKDFW 352
SCSC D+W
Sbjct: 507 SCSCMDYW 514
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/398 (39%), Positives = 219/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEAL ++ +Q + + D SL AC +L A E G +H +++K + D
Sbjct: 466 YSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSD 525
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V G +L + +++ +A+I LA G G KAL+ FY+M
Sbjct: 526 VFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLK 585
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ P+ IT V VL AC+HAGLV E F LM + +GI P+ EHY C+V ILGR GR+
Sbjct: 586 NGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLD 645
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A L+K MP V G LLGA RIH N+E AA+ LL L P+ G++++L+N Y+
Sbjct: 646 EAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYA 705
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S+ W V ++R M +KK PG IE+ V+ F+
Sbjct: 706 STGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRE 765
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VP L D+++ EKE L H+EKLA+ FGL++ PG IR+ KNLRVC D
Sbjct: 766 RLTSAGYVPMIETDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRVCID 825
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA ISKV +RE +V D NRFHHF++GSCSC D+W
Sbjct: 826 CHTAFKFISKVASREIIVRDINRFHHFRDGSCSCGDYW 863
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 86/225 (38%), Gaps = 58/225 (25%)
Query: 28 TMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD--VGLG--------------------M 65
T+ S L AC +G +++G LH +MK ++E D VG+G M
Sbjct: 291 TLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLM 350
Query: 66 ALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVL--VACSHAGLVDE 123
KDV+ ++I + CG +A+ F M G++ + T +L A S A E
Sbjct: 351 PXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCE 410
Query: 124 RISHFNLMS----EKYGIRPSIEHYG--CLVYILGRAGRIAKAEELIKNMPMAL------ 171
++ ++ S + Y ++ YG CL+ + + AE+L+ M
Sbjct: 411 QVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYG 470
Query: 172 -------------------DHFVLGGLLGACRIHDNLEAAERAAQ 197
D F+ L AC NL A E+ Q
Sbjct: 471 LGEEALKMYLRMQDRDIKPDAFIFSSLFNACA---NLSAYEQGKQ 512
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 22/131 (16%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EA+ LF + +GL ++ T+ ++L + A +H +K + D + +L
Sbjct: 373 EAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLL 432
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+D++ T++I + G G +AL+ + MQ R +KPDA
Sbjct: 433 DSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAF 492
Query: 107 TFVGVLVACSH 117
F + AC++
Sbjct: 493 IFSSLFNACAN 503
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKDVMT 72
L E+ G++ ++ ++ ++L AC L GM +H Y++K + D +
Sbjct: 175 LVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYD---------SDPFS 225
Query: 73 LTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC 115
AL+ + A G A+ FYE+ KPD +++ V+ C
Sbjct: 226 ANALLDMYAKSGCPEAAIAVFYEIP----KPDIVSWNAVIAGC 264
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 157/399 (39%), Positives = 226/399 (56%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQ-HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ EA+ ++ ++ H+ + ++ T VS+L A +H+GAL+ GM +H ++K +
Sbjct: 170 YAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYS 229
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
DV +G L K+ + A+I + G G KALE F EM+
Sbjct: 230 DVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMK 289
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
VKPD ITFV +L ACSH+GLV + FN+M E+YGI+PS++HYGC+V + GRAG +
Sbjct: 290 AERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGEL 349
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
A IK MP+ D G LL ACRIH N+E + A+++L E+ +N G YV+LSN Y
Sbjct: 350 EMAFNFIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIY 409
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
++ KW+ V +R L +R ++K PG I ++ V F
Sbjct: 410 ANVGKWEGVDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLT 469
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+VP+ VL D++E+EKE L H+E+LAI +G++S P IRI KNLRVC
Sbjct: 470 SKIKTIGYVPDFCFVLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCG 529
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHT T IS + RE +V D +RFHHFK G+CSC D+W
Sbjct: 530 DCHTVTKFISIITEREIIVRDSSRFHHFKGGTCSCGDYW 568
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 89/191 (46%), Gaps = 25/191 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL + E++ +G+ D +T+ S+L C +G + G +H Y++K +E +
Sbjct: 70 YCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFE 129
Query: 61 VG---------------------LGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI- 98
+ G+ +KDV++ LI A G ++A+E + M+
Sbjct: 130 LFVSNALINMYAKFGSLGHAQKVFGLLIKDVVSWNTLITGYAQNGLASEAIEVYLLMEEH 189
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERIS-HFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+ P+ T+V +L A SH G + + + H ++ K + + CL+ + G+ G++
Sbjct: 190 EEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVI--KNCLYSDVFVGTCLIDMYGKCGKL 247
Query: 158 AKAEELIKNMP 168
A L +P
Sbjct: 248 DDAISLFYQVP 258
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG-LVDE 123
M +D + A+I G +AL+ EM++ GVK DAIT VL C+ G ++
Sbjct: 55 MPARDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSG 114
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
++ H ++ K+G+ + L+ + + G + A+++
Sbjct: 115 KLIHLYVI--KHGLEFELFVSNALINMYAKFGSLGHAQKVF 153
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/391 (38%), Positives = 216/391 (55%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+E L LF++++ G L AC+ LGALE G LH ++ E + +G A+
Sbjct: 407 DEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAM 466
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D+++ ++I L G G KA+E F +M GV PD
Sbjct: 467 ISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDR 526
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
ITF+ VL ACSHAGLV++ +FN M E YGI P +HY +V + RAG + A +I
Sbjct: 527 ITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVID 586
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MP V LL CRIH N++ AA+QL +L+P N G+YV+LSN Y+ +W +
Sbjct: 587 SMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNE 646
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
V ++R+LM ++ ++K P C IEV+ VH F+ K G+
Sbjct: 647 VAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGY 706
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
+P+ VL DM+ E+KE AL+ H+EKLA+ FG++ PG +R+ KN+R+C DCH A
Sbjct: 707 IPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPGATVRVFKNIRICGDCHNAFKF 766
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+SKV RE +V DR RFHHFKNG CSC+D+W
Sbjct: 767 MSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 113/265 (42%), Gaps = 63/265 (23%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------ 54
YV +EAL L R+++ G+ D +T +++ AC ++G+ ++G +H YI+K
Sbjct: 264 YVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPN 323
Query: 55 ----------------KNIEVD------------------------VGLG---------- 64
KN +VD V G
Sbjct: 324 HSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFE 383
Query: 65 -MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG-LVD 122
M +K+++TLT +I LA G G++ L+ F +M++ G +P F G L ACS G L +
Sbjct: 384 EMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALEN 443
Query: 123 ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGA 182
R H L+ G S+ ++ + + G + AE + MP ++D ++ A
Sbjct: 444 GRQLHAQLV--HLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMP-SVDLVSWNSMIAA 500
Query: 183 CRIHDN-LEAAERAAQQLLE-LLPD 205
H + ++A E Q L E + PD
Sbjct: 501 LGQHGHGVKAIELFDQMLKEGVFPD 525
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 15/114 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + S A LF E+ + D + +L+ A LG LE+G E+
Sbjct: 58 YCKSSNLVYARQLFEEIPNP----DAIARTTLITAYCALGNLELGR-----------EIF 102
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVA 114
G + ++D + A+I A G G+ ALE F M+ +PD TF VL A
Sbjct: 103 NGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSA 156
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 157/401 (39%), Positives = 220/401 (54%), Gaps = 50/401 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + E A+ L+ ++ GL D T +L AC L A+E G +H ++++ E D
Sbjct: 151 YAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKD 210
Query: 61 VGLGMALKD-------------------------VMTLTALIVVLAMCGQGNKALEYFYE 95
V +G AL D V++ A+I AM G +AL+ F E
Sbjct: 211 VFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALDLFEE 270
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
M R KPD ITFVGVL ACSH GL++E F M Y I P+++HY C+V +LG +G
Sbjct: 271 MN-RVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSG 329
Query: 156 RIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSN 215
R+ +A LI M + D V G LL +C+IH N+E E A ++L+EL PD+ G+YVILSN
Sbjct: 330 RLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSN 389
Query: 216 RYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------ 257
Y+ + KW+ V ++R+LM +R +KK C IEV VH F+
Sbjct: 390 IYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELER 449
Query: 258 ------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
+AG+ P+ V D++++EK + H+E+LAI FGL+S PG + I KNLR+
Sbjct: 450 VGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRI 509
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH A ISK+ RE V D NR+HHFK+G CSC D+W
Sbjct: 510 CEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 550
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/398 (38%), Positives = 218/398 (54%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ E+AL+LFR++ G + +VS+L AC+ AL +G H Y +K + D
Sbjct: 413 YSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMED 472
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + G+ KD+ + A+I + G G +++E F M+
Sbjct: 473 VFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRK 532
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G PD TF+G+L CSHAGLV+E + +FN M +GI P +EHY C++ +LGRAGR+
Sbjct: 533 VGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLD 592
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A L+ MP D V LL CR LE + A++LLEL P N +YV LSN Y+
Sbjct: 593 DALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYA 652
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S +W V+R+R+++ + ++K GC IE+ G VH FV
Sbjct: 653 GSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEK 712
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+ PN S VL D+DEE+K L H+EKLAI FGL++ G +RI KNLR+C D
Sbjct: 713 KMCKIGYKPNTSAVLHDVDEEKKIEKLRGHSEKLAICFGLLNTTKGTTLRIFKNLRICVD 772
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A+ +S+V RE ++ D RFHHFK+G CSC D+W
Sbjct: 773 CHNASKFMSEVTGREIIIRDNKRFHHFKDGLCSCGDYW 810
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 22/131 (16%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
+AL L+ ++ + GL D T+ SLLLA HL +L G +H ++++ +E+D +G++L
Sbjct: 320 KALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLL 379
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
K ++ A+I + G AL F ++ G +P I
Sbjct: 380 SLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDI 439
Query: 107 TFVGVLVACSH 117
V VL ACS
Sbjct: 440 AVVSVLGACSQ 450
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 23/132 (17%)
Query: 9 EALLLFREVQ-HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD------- 60
EA LFRE+Q + + ++VT++++L AC + L LH Y ++ + D
Sbjct: 218 EAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGF 277
Query: 61 ---------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
V M K V + ALI A G KAL + +M G+ PD
Sbjct: 278 VAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDW 337
Query: 106 ITFVGVLVACSH 117
T +L+A +H
Sbjct: 338 FTIGSLLLASAH 349
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/400 (39%), Positives = 229/400 (57%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREV--QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
Y ++ EAL FRE+ + K + + VTMVS+L AC L ALE G +H YI+++ ++
Sbjct: 258 YAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLD 317
Query: 59 ------------------VDVGLG----MALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+DVG M +DV++ +LI + G G KA++ F EM
Sbjct: 318 SILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEM 377
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
G P +TFV VL ACSH GLV+E F M +GI+P +EHY C+V +LGRA R
Sbjct: 378 LANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANR 437
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A +++++M V G LLG+CRIH N+E AERA+++L L P N G+YV+L++
Sbjct: 438 LDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADI 497
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+ ++ W +VKR+++L+ R ++K PG +EV ++ FV
Sbjct: 498 YAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKL 557
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+ G++P VL++++ EEKE + H+EKLA+ FGL++ G IRI KNLR+C
Sbjct: 558 AEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLC 617
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH T ISK +E +V D NRFH FKNG CSC D+W
Sbjct: 618 EDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 62/165 (37%), Gaps = 29/165 (17%)
Query: 32 LLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----------------------KD 69
L+L C H +L G+ +H +I+ + D L L +
Sbjct: 83 LILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRT 142
Query: 70 VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERIS--- 126
+ AL L + G G + L +++M GV+ D T+ VL AC + + ++
Sbjct: 143 IYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGK 202
Query: 127 --HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPM 169
H +L Y I LV + R G + A + MP+
Sbjct: 203 EIHAHLTRRGYNSHVYI--MTTLVDMYARFGCVDYASYVFNGMPV 245
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 147/397 (37%), Positives = 228/397 (57%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
++ E AL F ++ G+ + VT VS + +C+ L AL G +H +K ++ V
Sbjct: 143 TQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVV 202
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ +L D++ +A+I G G KA+ F +M
Sbjct: 203 PVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAA 262
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G +P+ +TF+ +L ACSH+GL DE ++ F LM++ YG++PS++HY C+V +LGR+G + +
Sbjct: 263 GAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNE 322
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
AE+LI +MP+ D + LL AC+ + AER A++++EL P + SYV+LSN ++
Sbjct: 323 AEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRAT 382
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
S +W+ V ++RE M E+N++K PG +E+ G +H+F
Sbjct: 383 SSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTR 442
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+ G+ P+ S V DM++EEKE +L H+EKLAI F +S GV IR++KNLRVC+DC
Sbjct: 443 IRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDC 502
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H A ++SKV RE VV D +RFHHFK+G CSC D+W
Sbjct: 503 HVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 539
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 153/399 (38%), Positives = 232/399 (58%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +EAL LF+E+Q +G T+V++L C HL AL+ G +H +I++ ++
Sbjct: 384 YAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRME 443
Query: 61 ----------------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V MA +D++ +++ A G ++ L+ F +MQ+
Sbjct: 444 MVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQL 503
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G K DA++FV VL A SH+G V + +F M + + I P+ E YGC+V +LGRAGRI
Sbjct: 504 DGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQ 563
Query: 159 KAEELIKNMPMAL-DHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A +++ + L D + LLGACR H+ + A+ AA+Q+LE P + G+YV+LSN Y
Sbjct: 564 EAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVY 623
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------- 258
+++ W V R+R+LM R +KK PG IE+ VHEF++
Sbjct: 624 AAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLN 683
Query: 259 -----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
AG++P+ +L D+++E KE L H+E+LAI FGL+S PG +R+IKNLRVC+
Sbjct: 684 SEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLMSTPPGTPLRVIKNLRVCS 743
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTAT ISK+ RE +V D +RFH+FK+G CSCKD+W
Sbjct: 744 DCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 782
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 26/209 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ EA+ LF +Q G+ + +T V +L T L +L G +H + + + D
Sbjct: 283 YVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRD 342
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL KDV+T T + V A G +AL+ F EMQ+
Sbjct: 343 VVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQL 402
Query: 99 RGVKPDAITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G +P + T V VL C+H A L R H +++ + + +E L+ + G+ G++
Sbjct: 403 EGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVE--TALINMYGKCGKM 460
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIH 186
A+A + + M D V +LGA H
Sbjct: 461 AEARSVFEKMA-KRDILVWNSMLGAYAQH 488
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 25/258 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + AL +F ++Q + + KVT V++L AC +L+ GM +H I+++ E D
Sbjct: 81 YCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGD 140
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL +DV++ TA+I Q A + MQ+
Sbjct: 141 VFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQL 200
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV P+ IT V A + E ++L+S + + + + + G AG +
Sbjct: 201 DGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRV-MESDVRVMNSAMNMFGNAGLLG 259
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLEL-LPDNGGSYVILSNRY 217
A L ++M + D ++ ++N A R +L + + N ++V++ N Y
Sbjct: 260 DARRLFEDM-VDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVY 318
Query: 218 SSSRKWKKVKRIRELMAE 235
+S K K I EL+ E
Sbjct: 319 TSLTSLAKGKVIHELVKE 336
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 102/246 (41%), Gaps = 17/246 (6%)
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC-SHAGLVDERIS 126
KDV T +I + G ++AL FY+MQ V P +T+V +L AC S L D
Sbjct: 69 KDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEI 128
Query: 127 HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIH 186
H ++ + G + L+ + + G + A + K + D ++ AC H
Sbjct: 129 HGQILQQ--GFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHR-DVVSWTAMIAACVQH 185
Query: 187 DNLEAAERAAQ--QLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGC 244
D A + QL ++P+ Y + N Y + K I L++ R ++
Sbjct: 186 DQFALARWLYRRMQLDGVVPNKITLYTVF-NAYGDPHYLSEGKFIYSLVSSRVMESDVRV 244
Query: 245 ILIEVDGVVHEFVKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIR 304
+ + ++ F AG + + + DM + + + T + ITF + + G +R
Sbjct: 245 M----NSAMNMFGNAGLLGDARRLFEDMVDRD------VVTWNIVITFYVQNENFGEAVR 294
Query: 305 IIKNLR 310
+ L+
Sbjct: 295 LFGRLQ 300
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 158/409 (38%), Positives = 227/409 (55%), Gaps = 66/409 (16%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSL------------------LLACTHLGALEVGMWLHP 50
E L +FRE+QH G D + + S L+AC L AL +G +H
Sbjct: 132 ETLDVFREMQH-GEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHA 190
Query: 51 YIMK-------------------KNIEVDVGL----GMALKDVMTLTALIVVLAMCGQGN 87
YI++ K+ ++DV + K+ ++ T+L+ M G+G
Sbjct: 191 YILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGK 250
Query: 88 KALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCL 147
+ALE F EM+ G++PD +T + VL ACSH+G++D+ I FN MS+++G+ P EHY C+
Sbjct: 251 EALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACM 310
Query: 148 VYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNG 207
V +LGRAGR+ +A ELI+ M M V LL CRIH N+E E AA+QLLEL +N
Sbjct: 311 VDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSEND 370
Query: 208 GSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIE----------------VDG 251
GSY +LSN Y+++R+WK V R+R LM I+K PGC ++
Sbjct: 371 GSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHPQSK 430
Query: 252 VVHEFVKA--------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLI 303
++E +++ G+VP S L D+D+EEK L H+EKLA+ +G++ PG I
Sbjct: 431 QIYEILRSLTQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYGILISAPGAPI 490
Query: 304 RIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
RI KNLRVC DCH A IS + + E ++ D +RFHHFK GSCSC +W
Sbjct: 491 RITKNLRVCGDCHNAITYISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 155/392 (39%), Positives = 221/392 (56%), Gaps = 48/392 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
E+ L FRE+Q G++ ++V++ +L AC+ G+ E G LH ++ K V + AL
Sbjct: 244 ESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALI 303
Query: 69 D-----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D +++ T++I LAM GQG +A+ F EM GV PD
Sbjct: 304 DMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDG 363
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
I+F+ +L ACSHAGL++E +F+ M Y I P IEHYGC+V + GR+G++ KA + I
Sbjct: 364 ISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFIC 423
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP+ V LLGAC H N+E AE+ Q+L EL P+N G V+LSN Y+++ KWK
Sbjct: 424 QMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKD 483
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------------KAG 260
V IR+ M + IKK L+EV +++F +AG
Sbjct: 484 VASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAG 543
Query: 261 FVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATN 320
+ P + L+D++EEEKE ++ H+EKLA+ F L G IRI+KNLR+C DCH
Sbjct: 544 YTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMK 603
Query: 321 IISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ SKVY E +V DRNRFH FK+GSCSC+D+W
Sbjct: 604 LTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 635
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 6/152 (3%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD-E 123
M +D ++ + +IV +A G N++ YF E+Q G+ P+ ++ GVL ACS +G +
Sbjct: 221 MPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFG 280
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGAC 183
+I H EK G + L+ + R G + A + + M ++
Sbjct: 281 KILHG--FVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGL 338
Query: 184 RIHDNLEAAERAAQQLLE--LLPDNGGSYVIL 213
+H E A R ++ + PD G S++ L
Sbjct: 339 AMHGQGEEAVRLFNEMTAYGVTPD-GISFISL 369
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 15/117 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI--MKKNIEVDVGLGM 65
EEA+ LF E+ G+T D ++ +SLL AC+H G +E G Y MK+ ++
Sbjct: 345 EEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEG---EDYFSEMKRVYHIE----- 396
Query: 66 ALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
++ ++ + G+ KA ++ +M I P AI + +L ACS G ++
Sbjct: 397 --PEIEHYGCMVDLYGRSGKLQKAYDFICQMPI---PPTAIVWRTLLGACSSHGNIE 448
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/390 (39%), Positives = 217/390 (55%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL----- 63
EAL ++ +Q + + DKVT +S+L ACT +L G +H ++ ++ DV +
Sbjct: 298 EALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALT 357
Query: 64 -----------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
M ++ ++ ++ A G+ + L+ +M+ GVK + I
Sbjct: 358 NMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGI 417
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFV VL +CSHAGL+ E +F+ + GI EHYGCLV +LGRAG++ +AE+ I
Sbjct: 418 TFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISK 477
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP + LLGACR+H +L+ + AA++LLEL P N + V+LSN YS WK
Sbjct: 478 MPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNA 537
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEF------------------------VKAGFV 262
++R MA R +KK PG I+V VHEF +AG+V
Sbjct: 538 AKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYV 597
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ VL D+DEE+KE+ L H+EKLAI FGL+S + I KNLRVC DCHTAT I
Sbjct: 598 PDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVCEDCHTATKFI 657
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SK+ RE VV D +RFHHF++GSCSCKD+W
Sbjct: 658 SKITGREIVVRDNHRFHHFRDGSCSCKDYW 687
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 119/249 (47%), Gaps = 33/249 (13%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EA +F+ +QH+G D+VT +S+L AC + L+ G + I + + E+D+ +G AL
Sbjct: 94 EAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALI 153
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
K+++T +A+I A G +AL YF MQ G+ P+ +
Sbjct: 154 TMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRV 213
Query: 107 TFVGVLVA-CSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGR--AGRIAKAEEL 163
TF+ +L + +GL E +S +L+ ++G+ + LV + GR G + AE +
Sbjct: 214 TFISLLNGFTTPSGL--EELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVI 271
Query: 164 IKNM---PMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSS 220
++ M + + ++ G R + LE +R LE +P + +++ + N +SS
Sbjct: 272 LQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQ---LEAIPVDKVTFISVLNACTSS 328
Query: 221 RKWKKVKRI 229
+ K I
Sbjct: 329 TSLAEGKMI 337
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 27/194 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + C EAL FR +Q +G+ ++VT +SLL T LE +H I + ++
Sbjct: 187 FADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDT 246
Query: 61 VGLGMALKDV---------------------MTLTALIVVL---AMCGQGNKALEYFYEM 96
+ AL +V +TA V++ + G+ +ALE + +
Sbjct: 247 TTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRL 306
Query: 97 QIRGVKPDAITFVGVLVAC-SHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
Q+ + D +TF+ VL AC S L + ++ H N + + G+ + L + + G
Sbjct: 307 QLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAV--ECGLDSDVIVKNALTNMYSKCG 364
Query: 156 RIAKAEELIKNMPM 169
+ A + +MP+
Sbjct: 365 SMENARRIFDSMPI 378
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 147/397 (37%), Positives = 228/397 (57%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
++ E AL F ++ G+ + VT VS + +C+ L AL G +H +K ++ V
Sbjct: 251 TQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVV 310
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ +L D++ +A+I G G KA+ F +M
Sbjct: 311 PVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAA 370
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G +P+ +TF+ +L ACSH+GL DE ++ F LM++ YG++PS++HY C+V +LGR+G + +
Sbjct: 371 GAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNE 430
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
AE+LI +MP+ D + LL AC+ + AER A++++EL P + SYV+LSN ++
Sbjct: 431 AEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRAT 490
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
S +W+ V ++RE M E+N++K PG +E+ G +H+F
Sbjct: 491 SSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTR 550
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+ G+ P+ S V DM++EEKE +L H+EKLAI F +S GV IR++KNLRVC+DC
Sbjct: 551 IRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDC 610
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H A ++SKV RE VV D +RFHHFK+G CSC D+W
Sbjct: 611 HVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 647
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/382 (40%), Positives = 222/382 (58%), Gaps = 46/382 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ EALLLF ++ L D T+V+LL AC LGAL+ G LH I ++ +E D
Sbjct: 347 YIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEAD 406
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ LG AL +DV T TA+I LA G G ALE+FY+M+
Sbjct: 407 IYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRC 466
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G +P++++++ VL ACSH+ L++E +F+ M Y I P IEHYGC++ +LGR+G +
Sbjct: 467 DGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLD 526
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +L+K MP+ + + +L ACR+H +++ A+ AA+ LL+L PD G YV L N Y
Sbjct: 527 EAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYI 586
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
SR+W+ +IR LM ER +KK G I V G VH+FV +
Sbjct: 587 DSRQWENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISH 646
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P S++ D+DEEEKE AL H+EKLAI FGL++ P + + I KNLRVC D
Sbjct: 647 RLKSLGYSPLTSQITVDVDEEEKEQALLAHSEKLAIAFGLINLAPNLPVHIRKNLRVCED 706
Query: 315 CHTATNIISKVYNRETVVMDRN 336
CH+A +IS+++NRE +V DR+
Sbjct: 707 CHSAIKLISRLWNREIIVRDRS 728
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 20/186 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EA+ F+ + G+ D+VT++++L AC L LE+G LH + +K +
Sbjct: 214 YSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTS 273
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
L + ALI + A CG A + F + RG +P + + + C H G
Sbjct: 274 ENL---------VVALIDMYAKCGDFGHAQQVFDALG-RGPRPQSWNAI-IDGYCKH-GH 321
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM---PMALDHFVLG 177
VD S F+ M + I + ++ +G++ +A L +M + +D+F +
Sbjct: 322 VDVARSLFDEMEVR-----DIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVV 376
Query: 178 GLLGAC 183
LL AC
Sbjct: 377 NLLTAC 382
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 67 LKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERIS 126
++DV++ T+LI + + +A+ F M G+ PD +T + VL AC A L D +
Sbjct: 201 VRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSAC--AKLKDLELG 258
Query: 127 H-FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+L+ E+ G+ S L+ + + G A+++ +
Sbjct: 259 RSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDAL 300
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 155/393 (39%), Positives = 229/393 (58%), Gaps = 48/393 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL---- 63
EEAL LF +Q +G++ + VT SLL A + L AL+ G +H ++++ + V L
Sbjct: 194 EEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSL 253
Query: 64 ------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG-VKPD 104
M ++ V++ A++V + G+G + ++ F M+ VKPD
Sbjct: 254 IDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPD 313
Query: 105 AITFVGVLVACSHAGLVDERISHFN-LMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
++TF+ VL CSH GL D+ + F+ +M+ I IEHYGC++ +LGRAGR+ +A EL
Sbjct: 314 SVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFEL 373
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
IK MP + G LLGACR+H N E +LLE+ P+N G+YVILSN Y+S+ +W
Sbjct: 374 IKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRW 433
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVH------------------------EFVKA 259
+ V+ +RELM E+ + K PG IE+D +H +F ++
Sbjct: 434 EDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFKES 493
Query: 260 GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
G+VP++S VL+D+DEE+KE L H+EKLA+ FGL+S GV +R+IKNLR+C DCH
Sbjct: 494 GYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNFA 553
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+SKVY R+ + D+NRFHH G CSC D+W
Sbjct: 554 KFVSKVYGRQVSIRDKNRFHHVAGGICSCGDYW 586
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 31/195 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL LF ++ ++ T ++L +CT E+G +H +I K+N E
Sbjct: 86 YSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENH 145
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G +L +DV++ TA+I A G +ALE F +Q
Sbjct: 146 IFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQR 205
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHY----GCLVYILGRA 154
G+ + +T+ +L A S +D + +R + Y L+ + +
Sbjct: 206 EGMSSNYVTYASLLTALSGLAALDH-----GKQVHSHVLRCELPFYVVLQNSLIDMYSKC 260
Query: 155 GRIAKAEELIKNMPM 169
G + A ++ NMP+
Sbjct: 261 GNLNYARKIFNNMPV 275
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 155/392 (39%), Positives = 221/392 (56%), Gaps = 48/392 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
E+ L FRE+Q G++ ++V++ +L AC+ G+ E G LH ++ K V + AL
Sbjct: 252 ESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALI 311
Query: 69 D-----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D +++ T++I LAM GQG +A+ F EM GV PD
Sbjct: 312 DMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDG 371
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
I+F+ +L ACSHAGL++E +F+ M Y I P IEHYGC+V + GR+G++ KA + I
Sbjct: 372 ISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFIC 431
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP+ V LLGAC H N+E AE+ Q+L EL P+N G V+LSN Y+++ KWK
Sbjct: 432 QMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKD 491
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------------KAG 260
V IR+ M + IKK L+EV +++F +AG
Sbjct: 492 VASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAG 551
Query: 261 FVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATN 320
+ P + L+D++EEEKE ++ H+EKLA+ F L G IRI+KNLR+C DCH
Sbjct: 552 YTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMK 611
Query: 321 IISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ SKVY E +V DRNRFH FK+GSCSC+D+W
Sbjct: 612 LTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 6/152 (3%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD-E 123
M +D ++ + +IV +A G N++ YF E+Q G+ P+ ++ GVL ACS +G +
Sbjct: 229 MPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFG 288
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGAC 183
+I H EK G + L+ + R G + A + + M ++
Sbjct: 289 KILHG--FVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGL 346
Query: 184 RIHDNLEAAERAAQQLLE--LLPDNGGSYVIL 213
+H E A R ++ + PD G S++ L
Sbjct: 347 AMHGQGEEAVRLFNEMTAYGVTPD-GISFISL 377
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 15/117 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI--MKKNIEVDVGLGM 65
EEA+ LF E+ G+T D ++ +SLL AC+H G +E G Y MK+ ++
Sbjct: 353 EEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEG---EDYFSEMKRVYHIE----- 404
Query: 66 ALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
++ ++ + G+ KA ++ +M I P AI + +L ACS G ++
Sbjct: 405 --PEIEHYGCMVDLYGRSGKLQKAYDFICQMPI---PPTAIVWRTLLGACSSHGNIE 456
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 153/398 (38%), Positives = 223/398 (56%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+++S +++ L+ ++ + D +T S+L AC L AL +G +H Y+ +K + +
Sbjct: 277 YMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPN 336
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L M +DV + T+LI M GQG A+ F EMQ
Sbjct: 337 MLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQN 396
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G PD+I FV +L ACSH+GL++E +F M++ Y I P IEH+ CLV +LGR+GR+
Sbjct: 397 SGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVD 456
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +IK MPM + V G LL +CR++ N++ AA +LL+L P+ G YV+LSN Y+
Sbjct: 457 EAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYA 516
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ +W +V IR LM R I+K PG +E++ VH F+
Sbjct: 517 KAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVG 576
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VP L D++EE+KE L +H+EKLAI F +++ IRI KNLRVC D
Sbjct: 577 KMKELGYVPKTDSALHDVEEEDKECHLAVHSEKLAIVFAILNTQESP-IRITKNLRVCGD 635
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A +ISK+ RE V+ D NRFHHFK+G CSC D+W
Sbjct: 636 CHIAAKLISKIVQREIVIRDTNRFHHFKDGICSCGDYW 673
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 22/141 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ + ++ALL+FR++ G + D T +L AC+ L +G+ LH + K ++++
Sbjct: 108 YMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLN 167
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G M KDV++ +++ A Q + AL+ EM
Sbjct: 168 LFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDG 227
Query: 99 RGVKPDAITFVGVLVACSHAG 119
KPDA T +L A ++
Sbjct: 228 VRQKPDACTMASLLPAVTNTS 248
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 216/391 (55%), Gaps = 47/391 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG--- 64
E L+ F E+Q G T S+ A +GALE G W+H +++K ++ +G
Sbjct: 244 ETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTM 303
Query: 65 -------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
M +D++T ++ LA G G +A+ +F E++ G++ +
Sbjct: 304 LGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQ 363
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
ITF+ VL ACSH GLV E +F++M + Y ++P I+HY V +LGRAG + +A +
Sbjct: 364 ITFLSVLTACSHGGLVKEGKHYFDMMKD-YNVQPEIDHYVSFVDLLGRAGLLKEALIFVF 422
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MPM V G LLGACR+H N + + AA + EL PD+ G V+L N Y+S+ KW
Sbjct: 423 KMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWND 482
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
R+R++M +KK P C ++++ VH FV KAG+
Sbjct: 483 AARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGY 542
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VPN + VL ++E+E+ET L H+EK+A+ F L++ G IRI+KN+R+C DCH+A
Sbjct: 543 VPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAFKY 602
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+SKV+ RE VV D NRFHHF GSCSC D+W
Sbjct: 603 VSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 216/391 (55%), Gaps = 47/391 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG--- 64
E L+ F E+Q G T S+ A +GALE G W+H +++K ++ +G
Sbjct: 141 ETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTM 200
Query: 65 -------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
M +D++T ++ LA G G +A+ +F E++ G++ +
Sbjct: 201 LGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQ 260
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
ITF+ VL ACSH GLV E +F++M + Y ++P I+HY V +LGRAG + +A +
Sbjct: 261 ITFLSVLTACSHGGLVKEGKHYFDMMKD-YNVQPEIDHYVSFVDLLGRAGLLKEALIFVF 319
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MPM V G LLGACR+H N + + AA + EL PD+ G V+L N Y+S+ KW
Sbjct: 320 KMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWND 379
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
R+R++M +KK P C ++++ VH FV KAG+
Sbjct: 380 AARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGY 439
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VPN + VL ++E+E+ET L H+EK+A+ F L++ G IRI+KN+R+C DCH+A
Sbjct: 440 VPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAFKY 499
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+SKV+ RE VV D NRFHHF GSCSC D+W
Sbjct: 500 VSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 155/400 (38%), Positives = 228/400 (57%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREV--QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
Y ++ EAL FRE+ + K + + VTMVS+L AC L ALE G +H YI+++ ++
Sbjct: 258 YAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLD 317
Query: 59 VDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+ + AL +DV++ +LI + G G KA++ F EM
Sbjct: 318 SILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEM 377
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
G P +TFV VL ACSH GLV+E F M +GI+P IEHY C+V +LGRA R
Sbjct: 378 LANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANR 437
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A +++++M V G LLG+CRIH N+E AERA+++L L P N G+YV+L++
Sbjct: 438 LDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADI 497
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+ ++ W +VKR+++L+ R ++K PG +EV ++ FV
Sbjct: 498 YAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKL 557
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+ G++P VL++++ EEKE + H+EKLA+ FGL++ G IRI KNLR+C
Sbjct: 558 AEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLC 617
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH T ISK +E +V D NRFH FKNG CSC D+W
Sbjct: 618 EDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 155/398 (38%), Positives = 221/398 (55%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+++S +A+ L+ +++ + D +T S+L AC L AL +G +H Y+ KK + +
Sbjct: 263 YMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPN 322
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L M +DV + T+LI M GQG A+ F EM
Sbjct: 323 LLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLN 382
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G PD+I FV +L ACSH+GL+DE +F M++ Y I P IEHY CLV +LGRAGR+
Sbjct: 383 SGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVD 442
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +IK MP+ + V LL +CR+ N++ AA LL+L P+ G YV+LSN Y+
Sbjct: 443 EAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYA 502
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ +WK+V IR +M + I+K PG +E++ VH F+
Sbjct: 503 KAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVA 562
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VP L D++EE+KE L +H+EKLAI F L++ IRI KNLRVC D
Sbjct: 563 KMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTQE-YQIRITKNLRVCGD 621
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A +ISK+ RE +V D NRFHHFK+G CSC D+W
Sbjct: 622 CHIAAKLISKIVEREIIVRDTNRFHHFKDGVCSCGDYW 659
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 22/141 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV + ++ LL+FRE+ + G D T +L AC+ L G+ +H ++K ++ +
Sbjct: 94 YVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFN 153
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G M KDV++ +++ A + + ALE EM+
Sbjct: 154 LFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMED 213
Query: 99 RGVKPDAITFVGVLVACSHAG 119
G KPD T ++ A ++
Sbjct: 214 YGQKPDGCTMASLMPAVANTS 234
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 16/169 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + ++AL + RE++ G D TM SL+ A + + V Y+ K
Sbjct: 195 YAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENV-----LYVEK------ 243
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACS--HA 118
+ + + K++++ +I V +A++ + +M+ V+PDAITF VL AC A
Sbjct: 244 IFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSA 303
Query: 119 GLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
L+ RI + EK + P++ L+ + R G + A+ + M
Sbjct: 304 LLLGRRIHEY---VEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRM 349
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 149/391 (38%), Positives = 213/391 (54%), Gaps = 47/391 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E LL+F E+Q G T S+ A +GALE G W+H +++K + +G +
Sbjct: 248 ETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTI 307
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
KDV+T +++ A G G +A+ +F EM+ GV +
Sbjct: 308 LDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQ 367
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
ITF+ +L ACSH GLV E +F++M E Y + P I+HY +V +LGRAG + A I
Sbjct: 368 ITFLSILTACSHGGLVKEGKQYFDMMKE-YNLEPEIDHYVTVVDLLGRAGLLNDALVFIF 426
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MPM V G LLG+CR+H N + + AA + EL PD+ G V+L N Y+S+ +W
Sbjct: 427 KMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDA 486
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
R+R++M +KK P C +E++ VH FV KAG+
Sbjct: 487 AARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGY 546
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VPN VL +DE+E++ L H+EK+A+ F L++ G IRI+KN+R+C DCH+A
Sbjct: 547 VPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRY 606
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISKV+ RE VV D NRFHHF +GSCSC D+W
Sbjct: 607 ISKVFKREIVVRDTNRFHHFSSGSCSCGDYW 637
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 145/378 (38%), Positives = 212/378 (56%), Gaps = 47/378 (12%)
Query: 22 LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-------------- 67
L D TM +L AC L ALE G +H YI++ D + AL
Sbjct: 428 LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487
Query: 68 --------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
KD+++ T +I M G GN+A+ F EM+ G++PD ++F+ +L ACSH+G
Sbjct: 488 LLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547
Query: 120 LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGL 179
L+++ F +M + I P +EHY C+V +L R G ++KA E I+ +P+A D + G L
Sbjct: 548 LLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGAL 607
Query: 180 LGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIK 239
L CRI+ ++E AE+ A+++ EL P+N G YV+L+N Y+ + KW++VKR+RE + ++ ++
Sbjct: 608 LCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLR 667
Query: 240 KPPGCILIEVDGVVHEFVKA-------------------------GFVPNKSEVLFDMDE 274
K PGC IE+ G V+ FV G+ P L + DE
Sbjct: 668 KNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADE 727
Query: 275 EEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMD 334
+KE AL H+EKLA+ FGL++ P +R+ KNLRVC DCH +SK RE V+ D
Sbjct: 728 MQKEMALCGHSEKLAMAFGLLALPPRKTVRVTKNLRVCGDCHEMAKFMSKETRREIVLRD 787
Query: 335 RNRFHHFKNGSCSCKDFW 352
NRFHHFKNG CSC+ FW
Sbjct: 788 SNRFHHFKNGYCSCRGFW 805
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 65/144 (45%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV + E L +++++ + G+ D T++S+L+ C + G L +G +H +K E
Sbjct: 226 YVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERR 285
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ M ++V++ T++I G+ + A+ +M+
Sbjct: 286 INFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEK 345
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
GVK D + +L AC+ +G +D
Sbjct: 346 EGVKLDVVATTSILHACARSGSLD 369
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 19/126 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y D + A+ L ++++ +G+ D V S+L AC G+L+ G +H YI N+E +
Sbjct: 327 YTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESN 386
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV----------KPDAITFVG 110
+ + AL D+ T CG + A F M ++ + KPD+ T
Sbjct: 387 LFVCNALMDMYT---------KCGSMDGANSVFSTMVVKDIISWNTMIGELKPDSRTMAC 437
Query: 111 VLVACS 116
+L AC+
Sbjct: 438 ILPACA 443
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 153/398 (38%), Positives = 218/398 (54%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + E+A+ FR++Q +G+ ++ T+ S L C+H+ LE G LH +K D
Sbjct: 329 YAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGD 388
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL +D+++ +I + GQG KALE F M
Sbjct: 389 IFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLS 448
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD TF+GVL ACS GLV+E F+ MS+ YGI PSIEHY C+V ILGRAG+
Sbjct: 449 EGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFN 508
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+ + I+ M + + +LGAC++H N++ E+AA++L E+ P SY++LSN ++
Sbjct: 509 EVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFA 568
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
S +W V+ IR LM R IKK PGC +EVDG VH F+
Sbjct: 569 SKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQ 628
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VP VL ++ +EK L H+E+LA++F L+S IRI KNLR+C D
Sbjct: 629 SLMSIGYVPKTEVVLHNVSNKEKMEHLYYHSERLALSFALLSTNAVKPIRIFKNLRICED 688
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH +IS + N+E VV D RFHHFK G+CSC+D W
Sbjct: 689 CHDFMKLISDITNQEIVVRDIRRFHHFKRGTCSCQDRW 726
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 101/238 (42%), Gaps = 26/238 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + C +F ++ +G + T +S+L +C+ L E G +H +I+K + + D
Sbjct: 228 FYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDD 287
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL +D+ + T +I A Q KA++YF +MQ
Sbjct: 288 DFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQR 347
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KP+ T L CSH + E + ++ K G I LV + G+ G +
Sbjct: 348 EGIKPNEYTLASCLSGCSHMATL-ENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCME 406
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE--LLPDNGGSYVILS 214
AE + K + ++ D ++ H E A A + +L ++PD +LS
Sbjct: 407 HAEAIFKGL-ISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLS 463
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 28/134 (20%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD------- 60
+EA LF ++ KG ++ T+ SL+ T++G L G +H I K E D
Sbjct: 134 QEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPL 193
Query: 61 ---------------VGLGMALKDVMTLTALIVVL---AMCGQGNKALEYFYEMQIRGVK 102
V M D+++ AL+ CG+G + FY+M + G K
Sbjct: 194 IMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI---FYQMLLEGFK 250
Query: 103 PDAITFVGVLVACS 116
P+ TF+ VL +CS
Sbjct: 251 PNMFTFISVLRSCS 264
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 22/141 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + ++ L LF +++ K T+ ++L C + G+L G LH ++ E+D
Sbjct: 26 YAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGSLREGKVLHALALRSGCEID 85
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG +L DV+ +A+I L G G +A E F+ M+
Sbjct: 86 EFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRR 145
Query: 99 RGVKPDAITFVGVLVACSHAG 119
+G +P+ T ++ ++ G
Sbjct: 146 KGARPNQFTLSSLVSTATNMG 166
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 152/390 (38%), Positives = 222/390 (56%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
+AL LF + G D+VT++S+L AC + AL +G + Y++K+ V+V +G AL
Sbjct: 312 QALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALI 371
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
K++ T ++ + G+G +A+ FYEM +GV PD
Sbjct: 372 GMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEG 431
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
F VL ACSH+GLVDE F M+ Y + P HY CLV +LGRAG + +A +I+N
Sbjct: 432 IFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIEN 491
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
M + + V LL ACR+H N++ A +AQ+L EL PD YV LSN Y++ R+W+ V
Sbjct: 492 MKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDV 551
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGFV 262
+ +R L+A+R ++KPP +E++ +VH+F KAG+
Sbjct: 552 ENVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQLKKAGYK 611
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ S VL+D++EE KE L H+E+LA+ F L++ PG IRI KNLRVC DCHT +I
Sbjct: 612 PDTSLVLYDVEEEIKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCGDCHTVIKMI 671
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SK+ NRE ++ D RFHHF++G CSC +W
Sbjct: 672 SKLTNREIIMRDICRFHHFRDGLCSCGGYW 701
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 25/142 (17%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
+V++ A +F +++ G GD+ T+++LL AC + L+VG +H Y+++
Sbjct: 200 FVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGR 259
Query: 56 -------NIEVDVGL-------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYE 95
N +D+ G+ +KDV++ +LI CG +ALE F
Sbjct: 260 VCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGR 319
Query: 96 MQIRGVKPDAITFVGVLVACSH 117
M + G PD +T + VL AC+
Sbjct: 320 MVVVGAVPDEVTVISVLAACNQ 341
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 56/137 (40%), Gaps = 22/137 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y +++ AL L+ ++ H G D T +L AC L E+G +H ++ +E D
Sbjct: 99 YACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEED 158
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G M ++D+ + ++ G+ A E F +M+
Sbjct: 159 VYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRR 218
Query: 99 RGVKPDAITFVGVLVAC 115
G D T + +L AC
Sbjct: 219 DGFVGDRTTLLALLSAC 235
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 151/398 (37%), Positives = 222/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YVE E+ L +F E++ +G+ ++ T SL+ AC + ALE G LH +MK N + D
Sbjct: 284 YVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDED 343
Query: 61 VGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L D+ + +L+ V G G A+++F M
Sbjct: 344 PFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVD 403
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
RGVKP+AITF+ +L CSHAGLV+E + +F M + YG+ P EHY C++ +LGRAGR+
Sbjct: 404 RGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLK 463
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A+E I MP + F LGACRIH + E + AA++L++L P N G+ V+LSN Y+
Sbjct: 464 EAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYA 523
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEV------------------------DGVVH 254
+ R+W+ V+ +R M + N+KK PG ++V D ++
Sbjct: 524 NERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLD 583
Query: 255 EFVKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ AG+VP V DMD+ KE L+ H+E++A+ F L+S G I + KNLRVC D
Sbjct: 584 QIKAAGYVPXTDSVPLDMDDXMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVD 643
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A ISKV R+ +V D +RFHHF +GSCSC D+W
Sbjct: 644 CHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 26/177 (14%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEALL F+++ + +T D+ + S L AC L A + G +H ++K E D+ +G AL
Sbjct: 189 EEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNAL 248
Query: 68 KD-----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
D V++ T LI Q K L F E++ +G++P+
Sbjct: 249 TDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPN 308
Query: 105 AITFVGVLVACSHAGLVDERIS-HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA 160
TF ++ AC++ +++ H +M + P + LV + G+ G + A
Sbjct: 309 EFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEHA 363
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 156/395 (39%), Positives = 230/395 (58%), Gaps = 47/395 (11%)
Query: 1 YVEDSACEEALLLFREVQH-KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ EA+ + ++ + ++ T VS++ A +H+GAL+ GM +H ++K ++ +
Sbjct: 400 YTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYL 459
Query: 60 DVGLGMAL----------KDVMTL------------TALIVVLAMCGQGNKALEYFYEMQ 97
DV + L +D M+L A+I L + G+G +AL+ F +M
Sbjct: 460 DVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDML 519
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
VK D ITFV +L ACSH+GLVDE F++M ++YGI+PS++HYGC+V +LGRAG +
Sbjct: 520 AERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYL 579
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA EL++NMP+ D + G LL AC+I+ N E A+ +LLE+ +N G YV+LSN Y
Sbjct: 580 EKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIY 639
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
+++ KW+ V ++R L +R ++K PG + V F
Sbjct: 640 ANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLS 699
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+VP+ S V D++E+EKE LN H+E+LAI FG++S P IRI KNLRVC
Sbjct: 700 AKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCG 759
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSC 348
DCH AT IS++ RE VV D NRFHHFK+G CSC
Sbjct: 760 DCHNATKYISRISEREIVVRDSNRFHHFKDGICSC 794
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 67/148 (45%), Gaps = 24/148 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ ++ AL + ++ +G+ D +T+ S+L C + G+ +H +++K ++ D
Sbjct: 197 FCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSD 256
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL +D+++ ++I + AL +F MQ+
Sbjct: 257 VFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQL 316
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERIS 126
G++PD +T V + S L D+RIS
Sbjct: 317 GGIRPDLLTVVSLTSIFSQ--LSDQRIS 342
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHA-G 119
V + M +KDV + A+I G AL M+ GVK D IT +L C+ +
Sbjct: 178 VFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDD 237
Query: 120 LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+++ + H +++ K+G+ + L+ + + GR+ A+ + M
Sbjct: 238 VINGVLIHLHVL--KHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQM 283
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 159/399 (39%), Positives = 217/399 (54%), Gaps = 48/399 (12%)
Query: 2 VEDSACEEALLLFREVQH--KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
+ + +AL +F +Q G D VT + LL AC +LGALE G +H YI + +
Sbjct: 245 IHNRRTRDALRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEEHGYDG 304
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ L +L ++V++ +A+I AM G G +A+E F +MQ
Sbjct: 305 ALNLCNSLITMYSRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQ 364
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV PD T GVL ACSH GLVD+ + F+ MS+ +GI P+I HYGC+V +LGRAG +
Sbjct: 365 QLGVSPDDQTLTGVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLL 424
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A +LI +M + D + LLGACRIH + ER L+EL G YV+L N Y
Sbjct: 425 DQAYQLIMSMVIKPDSTLWRTLLGACRIHRHATLGERVIGHLIELKAQEAGDYVLLLNIY 484
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------- 258
SS W KV +R+ M E+ I+ PGC IE+ G VHEFV
Sbjct: 485 SSVGNWDKVTDLRKFMKEKGIQTSPGCSTIELKGKVHEFVVDDILHPRTDEIYEMLDEIG 544
Query: 259 -----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
AG+V S L ++ EEK L+ H+EKLAI FG+++ PG IR+ KNLR+C
Sbjct: 545 KQLKIAGYVAELSSELHNLGAEEKGNRLSYHSEKLAIAFGVLATPPGTTIRVAKNLRICV 604
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH ++S YNRE V+ DR RFHHF+ G CSC +W
Sbjct: 605 DCHNFAKVLSGAYNREVVIRDRTRFHHFREGQCSCNGYW 643
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 154/395 (38%), Positives = 222/395 (56%), Gaps = 46/395 (11%)
Query: 3 EDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK-------- 54
ED +E LFR++ G+ ++ T +L AC L A ++G +H Y+ +
Sbjct: 274 EDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSF 333
Query: 55 ------------KNIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG 100
N E V M D+++ T+LIV A GQ + AL++F + G
Sbjct: 334 AASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSG 393
Query: 101 VKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA 160
KPD ITFVGVL AC+HAGLVD + +F+ + EK+G+ + +HY C++ +L R+GR +A
Sbjct: 394 TKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEA 453
Query: 161 EELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSS 220
E +I NMPM D F+ LLG CRIH N+E AERAA+ L EL P+N +Y+ LSN Y+++
Sbjct: 454 ENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANA 513
Query: 221 RKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV----------------------- 257
W + ++R M R I K PG IE+ VH F+
Sbjct: 514 GLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKM 573
Query: 258 -KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCH 316
+ G+V + + VL D++EE+KE + H+EKLA+ FG++S PG I++ KNLR C DCH
Sbjct: 574 KEEGYVADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSPGTPIKVFKNLRTCVDCH 633
Query: 317 TATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDF 351
A ISK+ R+ +V D NRFH F +GSCSCKD+
Sbjct: 634 NAMKYISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 26/192 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTG-DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
YV EAL LFR +Q + + T+ S L A + +L G +H Y+++ +E+
Sbjct: 170 YVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLEL 229
Query: 60 D----------------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
D + MA KD+++ T +I G+ + F ++
Sbjct: 230 DEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLM 289
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERIS-HFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
GV+P+ TF GVL AC A L E++ + + G P LV++ + G
Sbjct: 290 GSGVRPNEYTFAGVLNAC--ADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGN 347
Query: 157 IAKAEELIKNMP 168
A + MP
Sbjct: 348 TETARRVFNQMP 359
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 148/392 (37%), Positives = 217/392 (55%), Gaps = 46/392 (11%)
Query: 7 CEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMA 66
C + E++ +GL D+ T++ +L C+ L G +H YI K E +V +G A
Sbjct: 504 CTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNA 563
Query: 67 L----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
L KDV+T TALI M G+G KAL+ F +M++ GV PD
Sbjct: 564 LIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPD 623
Query: 105 AITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
++ F+ + ACSH+G+V E + F+ M Y + P +EHY C+V +L R+G +A+AEE I
Sbjct: 624 SVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFI 683
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWK 224
+MPM D + G LL ACR N A+R ++++LEL D+ G YV++SN Y++ KW
Sbjct: 684 LSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWD 743
Query: 225 KVKRIRELMAERNIKKPPGCILIEVDGVVHEF------------------------VKAG 260
+VK +R M + +KK PG IE+ V+ F K G
Sbjct: 744 QVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEG 803
Query: 261 FVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATN 320
+V + L D++E++K L H+E+LAI FGL++ PG + ++KNLRVC DCHT T
Sbjct: 804 YVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTK 863
Query: 321 IISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
I+K+ RE +V D NRFH FK+G+CSC D W
Sbjct: 864 YITKIMQREILVRDANRFHRFKDGACSCGDHW 895
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 23/141 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + E+AL ++ + + G+ D TM S+LLAC L A++ G+ +H I K I D
Sbjct: 197 YCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGD 256
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G MA+KD +T +I A G+ +++ F +M I
Sbjct: 257 VIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-I 315
Query: 99 RGVKPDAITFVGVLVACSHAG 119
G PD ++ + AC +G
Sbjct: 316 DGFVPDMLSITSTIRACGQSG 336
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 81/183 (44%), Gaps = 23/183 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
+AL + E++ K L D T S++ +C + LE+G +H + M+ E D+ +G AL
Sbjct: 104 QALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALI 163
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+D ++ +LI G AL+ +++ ++ G+ PD
Sbjct: 164 DMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCF 223
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
T VL+AC V E ++ ++ EK GI + L+ + + R+ +A +
Sbjct: 224 TMSSVLLACGSLMAVKEGVAVHGVI-EKIGIAGDVIIGNGLLSMYFKFERLREARRVFSK 282
Query: 167 MPM 169
M +
Sbjct: 283 MAV 285
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 23/125 (18%)
Query: 21 GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD-------------------- 60
G D +++ S + AC G L+VG ++H Y++ E D
Sbjct: 317 GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAA 376
Query: 61 --VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHA 118
V KD +T +LI G + LE F M++ KPD++TFV +L S
Sbjct: 377 QEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQL 435
Query: 119 GLVDE 123
+++
Sbjct: 436 ADINQ 440
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 153/381 (40%), Positives = 217/381 (56%), Gaps = 53/381 (13%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKD--------------- 69
+ VT++++L C L AL G +H Y +K+ + +DV +G AL D
Sbjct: 755 NSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVF 814
Query: 70 -------VMTLTALIVVLAMCGQGNKALEYFYEMQIRG------VKPDAITFVGVLVACS 116
V+T LI+ M G+G +ALE F M G ++P+ +T++ + ACS
Sbjct: 815 DQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACS 874
Query: 117 HAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHF-V 175
H+G+VDE + F+ M +G+ P +HY CLV +LGR+GR+ +A ELI MP L+
Sbjct: 875 HSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDA 934
Query: 176 LGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAE 235
LLGACRIH ++E E AA+ L L P+ YV++SN YSS+ W + +R+ M E
Sbjct: 935 WSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKE 994
Query: 236 RNIKKPPGCILIEVDGVVHEFV------------------------KAGFVPNKSEVLFD 271
++K PGC IE VH+F+ K G+VP+ S VL +
Sbjct: 995 MGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMRKEGYVPDISCVLHN 1054
Query: 272 MDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETV 331
+D+EEKET L H+E+LAI FGL++ PG IR+ KNLRVCNDCH AT IISK+ +RE +
Sbjct: 1055 VDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVAKNLRVCNDCHVATKIISKIVDREII 1114
Query: 332 VMDRNRFHHFKNGSCSCKDFW 352
+ D RFHHF NG+CSC D+W
Sbjct: 1115 LRDVRRFHHFANGTCSCGDYW 1135
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 24/133 (18%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHL-GALEVGMWLHPYIMKKNIEVDVGLGMA 66
E +L LFR + + + T+VS+ AC+H+ G + +G +H Y ++ N ++ A
Sbjct: 415 ELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLR-NGDLRTYTNNA 473
Query: 67 L----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
L KD+++ +I L+ + +AL Y Y M + GV+PD
Sbjct: 474 LVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPD 533
Query: 105 AITFVGVLVACSH 117
+T VL ACS
Sbjct: 534 GVTLASVLPACSQ 546
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 77/185 (41%), Gaps = 27/185 (14%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK-----KNIEVDVG 62
EEAL+ + G+ D VT+ S+L AC+ L L +G +H Y ++ +N V
Sbjct: 516 EEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTA 575
Query: 63 L------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG-VKP 103
L G+ + V AL+ A ++AL F EM P
Sbjct: 576 LVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCP 635
Query: 104 DAITFVGVLVACSHAGLV-DERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE 162
+A TF VL AC + D+ H ++ +G +++ L+ + R GR+ ++
Sbjct: 636 NATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQN--ALMDMYSRMGRVEISKT 693
Query: 163 LIKNM 167
+ M
Sbjct: 694 IFGRM 698
>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 153/407 (37%), Positives = 222/407 (54%), Gaps = 55/407 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIM---KKNI 57
Y + EAL LFR + G+ D+V++V L A LG E G WLH ++ + +
Sbjct: 234 YTQHGRPSEALRLFRRMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVTNSSSRRV 293
Query: 58 EVDVGLGMAL------------------------KDVMTLTALIVVLAMCGQGNKALEYF 93
++ +G AL +D++ A++ AM G +AL F
Sbjct: 294 RLNARVGTALIDMYYKCGSLEDAVAVFGDLGAGDRDIVAWNAMVNGYAMHGHSREALAAF 353
Query: 94 YEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGR 153
+++ +G+ P ITF+GVL ACSH+GLVDE F M+E+YGI P +EHYGC+V +LGR
Sbjct: 354 GQLRAQGLWPTDITFIGVLNACSHSGLVDEGRELFRSMAEEYGIEPKVEHYGCMVDLLGR 413
Query: 154 AGRIAKAEELIKNMPMA-LDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVI 212
AGR+ +A EL+++M D + LL ACR+H N+E +R A L+ N G+YV+
Sbjct: 414 AGRVEEAFELVQSMTRTKPDAVMWASLLAACRLHKNMELGQRIADHLVANGLANSGTYVL 473
Query: 213 LSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFV-PNKSEVLFD 271
LSN Y+++ W++V R+R +M I+K PGC +EV V EFV P +E+
Sbjct: 474 LSNMYAAAGNWREVGRVRAMMRASGIQKEPGCSAVEVGRRVVEFVAGDRSHPRAAEIYAK 533
Query: 272 MDE--------------------------EEKETALNLHTEKLAITFGLVSPMPGVLIRI 305
++E KE AL +H+EKLA+ FGL+S PG I+I
Sbjct: 534 LEEVNGMARARGHVPRTELVLHDLDDDDTAAKEQALAVHSEKLALAFGLISTPPGTAIKI 593
Query: 306 IKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+KNLR C DCH ++S+V R+ V DRNRFHHF +GSC+C D+W
Sbjct: 594 VKNLRACADCHAVLKLVSEVTGRKIVFRDRNRFHHFVDGSCTCGDYW 640
>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 638
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 158/397 (39%), Positives = 214/397 (53%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V++ E+AL F+E+ + L ++ +VSLL A LG LE G +H +
Sbjct: 242 VQNGELEKALDYFKELGEQKLRPNEAILVSLLAAAAQLGTLEYGKRIHSIANSLRFPMTA 301
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
LG AL KD + +I LA G G +AL F + +
Sbjct: 302 SLGTALVDMYAKCGCIDESRFLFDRMPEKDKWSWNVMICGLATHGLGQEALALFEKFLTQ 361
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G P +TF+GVL ACS AGLV E F LM++ YGI P +EHYGC+V +L RAG +
Sbjct: 362 GFHPVNVTFIGVLTACSRAGLVSEGKHFFKLMTDTYGIEPEMEHYGCMVDLLSRAGFVYD 421
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A E+I MP D + +LG+C++H +E E +L+++ P + G YV L+ ++
Sbjct: 422 AVEMINRMPAPPDPVLWASVLGSCQVHGFIELGEEIGNKLIQMDPTHNGHYVQLARIFAR 481
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
RKW+ V ++R LMAERN K G LIE +G VH FV
Sbjct: 482 LRKWEDVSKVRRLMAERNSNKIAGWSLIEAEGRVHRFVAGDKEHERTTEIYKMLEIMGVR 541
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
AG+ N S VL D++EEEKE A+ H+E+LAI FGL+ G IRIIKNLRVC DC
Sbjct: 542 IAAAGYSANVSSVLHDIEEEEKENAIKEHSERLAIAFGLLVTKDGDCIRIIKNLRVCGDC 601
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H + IIS V+ RE +V D +RFHHFK G CSC+D+W
Sbjct: 602 HEVSKIISLVFEREIIVRDGSRFHHFKKGICSCQDYW 638
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 145/398 (36%), Positives = 224/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y +D +E LF ++ G+ ++ T +L AC + + E+G +H Y+ + +
Sbjct: 279 YFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPF 338
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
AL D+ + T+LI A GQ ++A+ YF +
Sbjct: 339 SFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVK 398
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G +PD ITFVGVL AC+HAGLVD+ + +F+ + E+YG+ + +HY C++ +L R+G+
Sbjct: 399 SGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFD 458
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE +I M M D F+ LLG CRIH NL+ A+RAA+ L E+ P+N +YV L+N Y+
Sbjct: 459 EAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYA 518
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ W +V +IR+ M +R + K PG I + VH F+
Sbjct: 519 TAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSK 578
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ GFVP+ + VL D+++E+KE L+ H+EKLA+ FG++S G I++ KNLR C D
Sbjct: 579 RMKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVAFGIISTPEGTPIKVFKNLRTCVD 638
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA ISK+ NR+ +V D NRFH F++G CSC+D+W
Sbjct: 639 CHTAIKFISKITNRKIIVRDSNRFHFFEDGHCSCRDYW 676
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 25/205 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLT-GDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
YV EAL LFR ++ + +K T+ S L A + L +G +H YIM+ ++
Sbjct: 177 YVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDS 236
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
D + AL +D++T TA+I G+ + + F ++
Sbjct: 237 DEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLL 296
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G++P+ TF GVL AC++ +E + + G P LV++ + G +
Sbjct: 297 RSGIRPNEFTFSGVLNACANQ-TSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNM 355
Query: 158 AKAEELIKNMPMALDHFVLGGLLGA 182
AE + K P D F L+
Sbjct: 356 VSAERVFKETPQP-DLFSWTSLIAG 379
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 160/399 (40%), Positives = 229/399 (57%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQH-KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ EA+ + ++ + + ++ T VS+L A +H+GAL+ GM +H ++K + +
Sbjct: 426 YAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFL 485
Query: 60 DVGLGMAL----------KDVMTL------------TALIVVLAMCGQGNKALEYFYEMQ 97
DV + L +D M+L A+I L + G G KAL+ F +M+
Sbjct: 486 DVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMR 545
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GVK D ITFV +L ACSH+GLVDE F+ M ++Y I+P+++HYGC+V + GRAG +
Sbjct: 546 ADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYL 605
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA L+ NMP+ D + G LL ACRIH N E A+ +LLE+ +N G YV+LSN Y
Sbjct: 606 EKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIY 665
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
++ KW+ ++R L +R ++K PG + V VV F
Sbjct: 666 ANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLN 725
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+VP+ S VL D++E+EKE L H+E+LAI FG++S P IRI KNLRVC
Sbjct: 726 AKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPKSPIRIFKNLRVCG 785
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH AT ISK+ RE +V D NRFHHFK+G CSC D+W
Sbjct: 786 DCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 27/193 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK-KNIEV 59
Y ++ AL F+E+ G+ D +T+VSL L +G +H ++++ + +EV
Sbjct: 324 YEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEV 383
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
D+ +G AL +DV++ LI A G ++A++ + M+
Sbjct: 384 DIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMME 443
Query: 98 I-RGVKPDAITFVGVLVACSHAGLVDERIS-HFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
R + P+ T+V +L A SH G + + + H L+ K + + CL+ + G+ G
Sbjct: 444 EGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLI--KNCLFLDVFVATCLIDMYGKCG 501
Query: 156 RIAKAEELIKNMP 168
R+ A L +P
Sbjct: 502 RLEDAMSLFYEIP 514
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 145/399 (36%), Positives = 224/399 (56%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ +A+ +F+ + +G + T+ ++L A + + +L G +H ++ +
Sbjct: 349 YVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALS 408
Query: 61 VGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+G AL +D ++ T++I+ LA G G +A+E F +M
Sbjct: 409 PSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQML 468
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G+KPD IT+VGVL AC+H GLV++ S+F+LM + I P++ HY C+V + GRAG +
Sbjct: 469 TLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLL 528
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A + ++NMPM D G LL +C+++ N++ A+ AA++LL + P+N G+Y L+N Y
Sbjct: 529 QEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVY 588
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVH----------------------- 254
SS KW +IR+LM R +KK G +++ H
Sbjct: 589 SSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIW 648
Query: 255 -EFVKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
E K GF P+ VL D++ E K+ L H+EKLAI FG++S +RI+KNLRVCN
Sbjct: 649 KEIKKMGFAPDTESVLHDLEVEVKDQILRYHSEKLAIAFGIISTPENTTLRIMKNLRVCN 708
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A ISK+ +RE +V D RFHHFK+GSCSCKD+W
Sbjct: 709 DCHNAIKFISKLVDREIIVRDATRFHHFKDGSCSCKDYW 747
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 62/157 (39%), Gaps = 30/157 (19%)
Query: 9 EALLLFREV-QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EAL F + + L D+ ++ S L AC +L L G +H YI++ + +G AL
Sbjct: 222 EALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNAL 281
Query: 68 ------------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
DV+ TAL+ G A + F ++ P
Sbjct: 282 ISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLK----DP 337
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPS 140
D + + ++V GL ++ I F M + G RP+
Sbjct: 338 DVVAWTAMIVGYVQNGLNNDAIEVFKTMVSE-GPRPN 373
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 3/135 (2%)
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE-RISH 127
DV+ TA+IV G N A+E F M G +P++ T +L A S ++ + H
Sbjct: 338 DVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIH 397
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHD 187
+ + + PS+ + L + +AG I A ++ + D ++ A H
Sbjct: 398 ASAIRSGEALSPSVGN--ALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHG 455
Query: 188 NLEAAERAAQQLLEL 202
E A +Q+L L
Sbjct: 456 LGEEAIELFEQMLTL 470
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 153/380 (40%), Positives = 213/380 (56%), Gaps = 52/380 (13%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----------------- 67
+ +T++++L C L A+ G +H Y ++ + D+ +G AL
Sbjct: 517 NAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVF 576
Query: 68 -----KDVMTLTALIVVLAMCGQGNKALEYFYEMQI---RG--VKPDAITFVGVLVACSH 117
K+V+T LI+ M G+G +ALE F M RG KP+ +TF+ V ACSH
Sbjct: 577 NEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSH 636
Query: 118 AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHF-VL 176
+GL+ E ++ F M +G+ P+ +HY C+V +LGRAG++ +A EL+ MP D
Sbjct: 637 SGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAW 696
Query: 177 GGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAER 236
LLGACRIH N+E E AA+ LL L P+ YV+LSN YSS+ W K +R+ M +
Sbjct: 697 SSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQM 756
Query: 237 NIKKPPGCILIEVDGVVHEFV------------------------KAGFVPNKSEVLFDM 272
+KK PGC IE VH+F+ K G+VP+ S VL ++
Sbjct: 757 GVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNV 816
Query: 273 DEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVV 332
DE+EKE L H+EKLAI FG+++ PG IR+ KNLRVCNDCH AT ISK+ RE +V
Sbjct: 817 DEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIV 876
Query: 333 MDRNRFHHFKNGSCSCKDFW 352
D RFHHFK G+CSC D+W
Sbjct: 877 RDVRRFHHFKEGTCSCGDYW 896
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 25/183 (13%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL-GMAL 67
EAL FR + +G+ D VT+ S+L AC+HL L+VG +H Y+++ N ++ G AL
Sbjct: 280 EALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSAL 339
Query: 68 KD----------------------VMTLTALIVVLAMCGQGNKALEYFYEM-QIRGVKPD 104
D + A+I A G KAL F EM ++ G+ P+
Sbjct: 340 VDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPN 399
Query: 105 AITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
T V+ AC H + S + + K G + L+ + R G++ +E +
Sbjct: 400 TTTMASVMPACVHCEAFSNKES-IHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIF 458
Query: 165 KNM 167
+M
Sbjct: 459 DSM 461
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 24/139 (17%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLG---ALEVGMWLHPYIMK----KNIEVD 60
E+AL FR +Q + + T+VS+ LAC++LG L +G LH Y ++ K +
Sbjct: 176 EQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQKTFTNN 235
Query: 61 VGLGMALK-----------------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
+ M K D+++ +I + + ++AL +F M + GV+
Sbjct: 236 ALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVEL 295
Query: 104 DAITFVGVLVACSHAGLVD 122
D +T VL ACSH +D
Sbjct: 296 DGVTIASVLPACSHLERLD 314
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 222/390 (56%), Gaps = 47/390 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LF ++Q +G+ +++S+L C L +L+ G +H ++++ + DV + L
Sbjct: 314 EALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLM 373
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
KD++ ++I A G G +AL+ F+EM + G P+ +
Sbjct: 374 TMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKV 433
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
T + +L ACS+ G ++E + F M K+ + P++EHY C V +LGRAG++ KA ELI +
Sbjct: 434 TLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINS 493
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
M + D V G LLGAC+ H L+ AE AA++L E+ P+N G Y++LS+ +S KW V
Sbjct: 494 MTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSSINASRSKWGDV 553
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------------AGF 261
+R+ M +N+ K PGC IEV VH F + AG+
Sbjct: 554 AEMRKNMRTKNVSKFPGCSWIEVGKKVHMFTRGGIRNHPEQAMILMMLEKTDGLLREAGY 613
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P+ S VL D+DEEEK +L+ H+E+LA+ +GL+ GV IR++KNLRVC DCH A +
Sbjct: 614 SPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKL 673
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDF 351
ISKV RE ++ D NRFHHF NG CSC+D+
Sbjct: 674 ISKVTEREIILRDANRFHHFNNGECSCRDY 703
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 11/122 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y EEAL +F E+ G +KVT++++L AC++ G LE G+ + + K
Sbjct: 407 YASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFC--- 463
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
V + + +L G+ +KA+E M I KPDA + +L AC
Sbjct: 464 -----VTPTVEHYSCTVDMLGRAGKVDKAMELINSMTI---KPDATVWGALLGACKTHSR 515
Query: 121 VD 122
+D
Sbjct: 516 LD 517
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 283 bits (725), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 154/390 (39%), Positives = 216/390 (55%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EA+ LFR +Q G+ + VT+ +L A ++ AL G H + ++K DV +G AL
Sbjct: 272 EAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALV 331
Query: 69 D----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
D V++ A+I AM G A++ F MQ KPD +
Sbjct: 332 DMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLV 391
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF VL ACS AGL +E +FN M + +GI P +EHY C+V +LGR+G++ +A +LI
Sbjct: 392 TFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINE 451
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP D + G LLG+CR++ N+ AE AA++L +L P N G+YV+LSN Y+S + W V
Sbjct: 452 MPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGV 511
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVH------------------------EFVKAGFV 262
R+R+ M +KK GC IE+ VH E + GF
Sbjct: 512 NRVRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSHPMMTAITEKLNQLTIEMNRLGFA 571
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P++ VL D++E+EK+ L +H+EKLA+ GL+S PG +R+IKNLR+C DCH A I
Sbjct: 572 PSRDFVLHDVEEQEKDNILAVHSEKLAVALGLISTRPGTPLRVIKNLRICGDCHEAMKFI 631
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S RE V D NRFHHFK+G CSC D+W
Sbjct: 632 SSFEQREISVRDTNRFHHFKDGKCSCGDYW 661
Score = 37.7 bits (86), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 64/162 (39%), Gaps = 23/162 (14%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
+A+ + +G D + L A + + VG +H Y++K +D + AL
Sbjct: 136 DAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALI 195
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
DV + AL+ L+ Q ++AL F E RGV+ + +
Sbjct: 196 DMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVV 255
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLV 148
++ ++ C G E + F M + G+ P+ C++
Sbjct: 256 SWTSIVACCVQNGRDLEAVDLFRTM-QSIGVEPNSVTIPCVL 296
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 283 bits (725), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 157/398 (39%), Positives = 220/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YVE+S E+ L LFR + +G+ + + S LL C+ L AL++G +H + K + D
Sbjct: 259 YVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCND 318
Query: 61 VG--------------LG--------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG M KDV+ A+I A G +KAL F EM
Sbjct: 319 VTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMID 378
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
++PD ITFV VL+AC+HAGLV+ +++F M Y + P +HY C+V +LGRAG++
Sbjct: 379 NKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLE 438
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI++MP V G LLGACR+H N+E AE AA++LL+L N YV L+N Y+
Sbjct: 439 EALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYA 498
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
S +W+ V R+R+ M E N+ K PG IE+ VH F
Sbjct: 499 SKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEK 558
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+ P L +++EE+KE L H+EKLA+ FG + G I++ KNLR+C D
Sbjct: 559 KMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGD 618
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A IS++ RE +V D RFHHFK+GSCSC D+W
Sbjct: 619 CHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
>gi|224074129|ref|XP_002304264.1| predicted protein [Populus trichocarpa]
gi|222841696|gb|EEE79243.1| predicted protein [Populus trichocarpa]
Length = 499
Score = 283 bits (725), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 158/378 (41%), Positives = 216/378 (57%), Gaps = 46/378 (12%)
Query: 21 GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK--------------------NIEVD 60
G D VT + LL AC +LGALE G +H +I+++ N++
Sbjct: 122 GCEPDDVTCLLLLQACANLGALEFGEKVHGHIVERGYDNATNLCNSLIAMYSQFGNLDKA 181
Query: 61 VGL--GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHA 118
G+ GM K+V+T +A+I LAM G G +A+ F EM GV PD +TF GVL ACS+
Sbjct: 182 FGVFKGMHNKNVVTWSAIISGLAMNGYGREAIGAFEEMLKMGVLPDDLTFTGVLSACSNC 241
Query: 119 GLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGG 178
GLVD+ + F MS+++GI P+I HYGC+V +LGRAG++ +A +LI +M + D +
Sbjct: 242 GLVDKGMIIFARMSKEFGIVPNIHHYGCMVDLLGRAGQLHQAYQLIMSMRVKPDSTIWRT 301
Query: 179 LLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNI 238
LLGACRIH N+ E + L+EL G YV+L N YSS WKKV +R+ M E+ I
Sbjct: 302 LLGACRIHRNVILGEHVVEHLIELKAQEAGDYVLLFNLYSSVDNWKKVTELRKFMKEKGI 361
Query: 239 KKPPGCILIEVDGVVHEFVK------------------------AGFVPNKSEVLFDMDE 274
+ P IE+ G VHEFV AG+V + L ++D
Sbjct: 362 QTTPASSSIELKGKVHEFVVDDVSHPQKDEIYEMLDEISKQLKIAGYVAEITSELPNLDA 421
Query: 275 EEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMD 334
EEK L+ H+EKLAI FG+++ PG IRI KNLR+C DCH I+S VYNR+ ++ D
Sbjct: 422 EEKRYVLSYHSEKLAIAFGVLATPPGTTIRIAKNLRICVDCHNFAKILSGVYNRQVIITD 481
Query: 335 RNRFHHFKNGSCSCKDFW 352
RFHHF+ G CSC D+W
Sbjct: 482 HTRFHHFRGGHCSCNDYW 499
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 56/111 (50%), Gaps = 14/111 (12%)
Query: 5 SACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG 64
S+ E +++E++ KGL D V++ ++ + +L G +H I+ +
Sbjct: 3 SSPTEGFFMYQEMRKKGLRADPVSLSFVIRCYIRICSLIGGEQVHARILSDGHQ------ 56
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC 115
D + LT L+ + ++C +G++A + F EM+ R D I + VL++C
Sbjct: 57 ---SDSLLLTNLMDLYSLCDKGSEACKVFDEMRQR----DTIAW-NVLISC 99
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 283 bits (725), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 221/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EEAL LF E++ +G+ T SLL +G + G +H ++K ++++
Sbjct: 452 YAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLN 511
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL ++V++ T++I A G +ALE F++M
Sbjct: 512 QSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLE 571
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+P+ +T++ VL ACSH GLV+E HF M ++G+ P +EHY C+V ILGR+G ++
Sbjct: 572 EGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLS 631
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I +MP D V LGACR+H NLE + AA+ ++E P + +Y++LSN Y+
Sbjct: 632 EAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYA 691
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S KW +V IR+ M E+ + K GC +EV+ VH+F
Sbjct: 692 SISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSV 751
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+VPN VL D++EE+KE L H+EK+A+ FGL+S IR+ KNLR+C D
Sbjct: 752 KIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGD 811
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A IS RE +V D NRFHH K+G CSC ++W
Sbjct: 812 CHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 24/136 (17%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN-IEVDVGLGMALK 68
ALL F ++ G ++ + AC+ + VG + +++K ++ DV +G L
Sbjct: 152 ALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLI 211
Query: 69 DV-----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D+ +T T +I L G +A++ F +M G +PD
Sbjct: 212 DMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDR 271
Query: 106 ITFVGVLVACSHAGLV 121
T GV+ AC++ L+
Sbjct: 272 FTLSGVISACANMELL 287
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 119/332 (35%), Gaps = 78/332 (23%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EA+ LF ++ G D+ T+ ++ AC ++ L +G LH ++ + +D +G L
Sbjct: 254 EAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLI 313
Query: 68 ------------------------KDVMTLTALIV-VLAMCGQGNKALEYFYEMQIRGVK 102
+V + TA+I + G +AL+ F M + V
Sbjct: 314 NMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVI 373
Query: 103 PDAITFVGVLVACSH-----------------------------------AGLVDERISH 127
P+ TF L AC++ +G +D+
Sbjct: 374 PNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKA 433
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL---IKNMPMALDHFVLGGLL-GAC 183
F+++ EK I Y ++ + +A EL I++ M F LL GA
Sbjct: 434 FDILFEKNLIS-----YNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAA 488
Query: 184 RIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPG 243
I + + A+ + L N L + YS + ++ E M +RN+
Sbjct: 489 SIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNV----- 543
Query: 244 CILIEVDGVVHEFVKAGFVPNKSEVLFDMDEE 275
I ++ F K GF E+ M EE
Sbjct: 544 ---ISWTSIITGFAKHGFATQALELFHKMLEE 572
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 283 bits (725), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 222/397 (55%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V++ ++AL ++ ++ + D+ T +L+ A + + ALE G LH ++K + D
Sbjct: 1184 VDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDP 1243
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+G +L +++ A++V LA G +A+ F M+
Sbjct: 1244 FVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSH 1303
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G++PD ++F+G+L ACSHAGL E + + M YGI P IEHY CLV LGRAG + +
Sbjct: 1304 GIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQE 1363
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A+++I+ MP + LLGACRI ++E +R A +L L P + +YV+LSN Y++
Sbjct: 1364 ADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAA 1423
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
+ +W V R++M +N+KK PG I+V ++H FV
Sbjct: 1424 ANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKT 1483
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+ G+VP+ VL D+++EEKE +L H+EKLAI +GL+S IR+IKNLRVC DC
Sbjct: 1484 IREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDC 1543
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H A ISKV+ RE V+ D NRFHHF++G CSC D+W
Sbjct: 1544 HNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 1580
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 23/145 (15%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHL-GALEVGMWLHPYIMKKNIEVD 60
+ S EE++ LF ++ H+GL D T+ S+L AC+ L L + +H + +K D
Sbjct: 981 AQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIAD 1040
Query: 61 VGLGMALKDVMT----------------------LTALIVVLAMCGQGNKALEYFYEMQI 98
+ L DV + A++ + G KALE F +
Sbjct: 1041 SFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHK 1100
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE 123
G K D IT AC L+D+
Sbjct: 1101 SGEKSDQITLATAAKACGCLVLLDQ 1125
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 25/190 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ + ++AL LF + G D++T+ + AC L L+ G +H + +K + D
Sbjct: 1082 YIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSD 1141
Query: 61 VG-----LGMALK-----------------DVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L M +K D + T++I G ++AL ++ M+
Sbjct: 1142 LHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQ 1201
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V PD TF ++ A S +++ R H N++ P + LV + + G I
Sbjct: 1202 SRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAKCGNI 1259
Query: 158 AKAEELIKNM 167
A L K M
Sbjct: 1260 EDAYRLFKKM 1269
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 70/166 (42%), Gaps = 26/166 (15%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK---------------- 68
D VT++ +L A LE+G +H +K ++ DV + +L
Sbjct: 903 DAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVF 962
Query: 69 ------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSH--AGL 120
D+++ ++I A +++ F ++ G+KPD T VL ACS GL
Sbjct: 963 NDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGL 1022
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
R H + + K G L+ + ++G++ +AE L +N
Sbjct: 1023 NISRQIHVHAL--KTGNIADSFVATTLIDVYSKSGKMEEAEFLFQN 1066
>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
Length = 533
Score = 283 bits (725), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 156/400 (39%), Positives = 223/400 (55%), Gaps = 49/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EALLLF E++ VT + ++ AC +LG +G H +I+ +E+D
Sbjct: 135 YTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGRKFHDFIVDSRMEID 194
Query: 61 VGLGMALKDVM------------------------TLTALIVVLAMCGQGNKALEYFYEM 96
L AL D+ + LI M G G +ALE F M
Sbjct: 195 TNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGMHGHGKEALELFSRM 254
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
Q GV+P+ TF +L ACSHAGL+DE F M ++ + +H+ C+V +LGRAG
Sbjct: 255 QEEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEM-KRLSVTLEDKHHACVVDMLGRAGL 313
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A +LIK MP V G LL AC+IH N+E + AA LL+L P++ G YV++SN
Sbjct: 314 LQEAFDLIKEMPSPPSDGVWGALLLACKIHGNMELGKTAASNLLQLEPNHTGYYVLMSNI 373
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVV-------------HEFVK----- 258
Y++S KWK+V ++R+ M + +KKP +IE + HE K
Sbjct: 374 YAASNKWKEVWKLRQDMKNKGLKKPAAFSMIEYGKDILGFHTADQENPYRHEVYKKMESL 433
Query: 259 ------AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
AG+VP+ S L D++EE+KE LN H+EKLA+ FG++ PG++IR+ KNLRVC
Sbjct: 434 AIEMKMAGYVPDLSCALHDVEEEDKERMLNYHSEKLAVAFGVLKIDPGMVIRVTKNLRVC 493
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
NDCH+A IS +Y R+ +V D NRFHHF+ G+CSCKD+W
Sbjct: 494 NDCHSAFKYISHIYQRKIIVRDANRFHHFQGGTCSCKDYW 533
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 26/192 (13%)
Query: 1 YVEDSACEEALLLFREVQHK-GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y + EEAL+LF+++Q + GL D + +VS+ A LG ++ +H Y +K++
Sbjct: 33 YEQAEKPEEALILFKKMQQEEGLLADSIAVVSVASAVGQLGDVKNAHTVHGYAFRKSLIE 92
Query: 60 DVGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
++ +G M +DV++ +++ GQ +AL F EM+
Sbjct: 93 ELCVGNSILAMHTKCGNTEKARLVFDMMMERDVISWNSMLSGYTQNGQATEALLLFDEMR 152
Query: 98 IRGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+P +T + ++ AC++ G R H ++ + I ++ + L+ + + G
Sbjct: 153 DSDCQPTPVTALIMVSACAYLGFRHLGRKFHDFIVDSRMEIDTNLSN--ALMDMYAKCGD 210
Query: 157 IAKAEELIKNMP 168
+ KA +L +P
Sbjct: 211 LEKAVDLFNGIP 222
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 283 bits (724), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 157/399 (39%), Positives = 219/399 (54%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +EA+ LFR + G + T+ ++L AC L L+ G +H ++ E
Sbjct: 589 YHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQS 648
Query: 61 VGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
V + A+ K+ +T T++IV +A G G +A+ F EM
Sbjct: 649 VSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMV 708
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GVKPD IT+VGVL AC+HAG VD+ ++ M ++GI P + HY C+V + RAG +
Sbjct: 709 RVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLL 768
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A E I+ MP+A D V G LL ACR+ N + AE AA +LL + P N G+Y L+N Y
Sbjct: 769 TEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALANVY 828
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVH----------------------- 254
S+ +W RI +L ++ +KK G V G VH
Sbjct: 829 SACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDSIYRKAAEMW 888
Query: 255 -EFVKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
E KAGFVP+ + VL D+D+E KE L+ H+EKLAI FGL+S +RI+KNLRVCN
Sbjct: 889 EEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCN 948
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTA ISK +RE +V D RFHHF++G CSCKD+W
Sbjct: 949 DCHTAIKFISKFVDREIIVRDATRFHHFRDGYCSCKDYW 987
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 117/276 (42%), Gaps = 35/276 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
+A+ F ++ +G + T+ ++L +C + A VG +HP+++K LG++
Sbjct: 330 DAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVK--------LGLS-S 380
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC-SHAGLVDERISH 127
V +++ + CG A F MQ+R +++ V+V+ +H G ++ +S
Sbjct: 381 CVPVANSVLYMYGKCGDAETARAVFERMQVR-----SVSSWNVMVSLYTHQGRMELAVSM 435
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM----PMALDHFVLGGLLGAC 183
F M E+ SI + ++ + G A + M M D F + +L AC
Sbjct: 436 FENMVER-----SIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSAC 490
Query: 184 RIHDNLEAAERAAQQLLEL-LPDNGGSYVILSNRYSSSRKWKKVKRI--RELMAERNIKK 240
L+ ++ +L +P + L + Y+ S + +RI + ++A+ N+
Sbjct: 491 ANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNV-- 548
Query: 241 PPGCILIEVDGVVHEFVKAGFVPNKSEVLFDMDEEE 276
I ++ +VK G E+ M+ +
Sbjct: 549 ------ISFTALLEGYVKLGDTKQAREIFDIMNNRD 578
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 64/169 (37%), Gaps = 56/169 (33%)
Query: 10 ALLLF-REVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN------------ 56
AL F R + + D T+ S+L AC +L L++G +H YI++
Sbjct: 463 ALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALI 522
Query: 57 --------------------------------IEVDVGLG-----------MALKDVMTL 73
+E V LG M +DV+
Sbjct: 523 STYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAW 582
Query: 74 TALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
TA+IV GQ ++A+E F M + G +P++ T VL AC+ +D
Sbjct: 583 TAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLD 631
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 283 bits (724), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 157/393 (39%), Positives = 221/393 (56%), Gaps = 47/393 (11%)
Query: 6 ACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGM 65
A +EA+ LFRE+Q G+ D +T+VS++ AC GAL++G WLH YI K + D+ L
Sbjct: 173 AVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGYWLHAYIEKYFVLTDLELST 232
Query: 66 AL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
AL KD +++I+ A G A++ F +M V P
Sbjct: 233 ALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTP 292
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
D +TF+ VL AC+H GLV ++LM E +GI PS+EHYGC V +L R+G + +A +
Sbjct: 293 DHVTFLAVLSACAHGGLVSRGRRFWSLMLE-FGIEPSVEHYGCKVDLLCRSGLVEEAYRI 351
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
M + + LL C+ L E A+ LLEL P N +Y+++SN YSS +W
Sbjct: 352 TTTMKIPPNAATWRSLLMGCKKKKLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQW 411
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KA 259
+K+ +R++M E+ IK PGC IEVDGVVHEFV +
Sbjct: 412 EKMSELRKVMKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVRDS 471
Query: 260 GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
G+ P+ S+VL + +EEKE AL+ H+E+ AI +GL+ ++IR++KNLRVC DCH
Sbjct: 472 GYRPSISDVLHKVVDEEKECALSEHSERFAIAYGLLKTRAPIVIRVVKNLRVCVDCHEVI 531
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IISK+Y RE +V DR RFH F G+CSCKDFW
Sbjct: 532 KIISKLYEREIIVRDRVRFHKFIKGTCSCKDFW 564
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 112/233 (48%), Gaps = 29/233 (12%)
Query: 8 EEALLLFREVQHKGL-TGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV------- 59
+E + LF+++ G + T+ +L AC + A G+ +H +++K
Sbjct: 73 KEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLKDGFGSSLFVQTS 132
Query: 60 ---------DVGLG------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
++G M +++++ TA+I A G ++A+E F EMQ G++PD
Sbjct: 133 LVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMELFREMQKAGIQPD 192
Query: 105 AITFVGVLVACSHAGLVDERISHF-NLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
A+T V V+ AC+ AG +D I ++ + EKY + +E LV + + G I +A+++
Sbjct: 193 AMTLVSVVSACAVAGALD--IGYWLHAYIEKYFVLTDLELSTALVDMYAKCGCIERAKQV 250
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLL--ELLPDNGGSYVILS 214
+MP+ D ++ H + A A QQ+L E+ PD+ +LS
Sbjct: 251 FVHMPVK-DTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAVLS 302
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 283 bits (724), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 147/394 (37%), Positives = 213/394 (54%), Gaps = 46/394 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + E+AL FR++Q +G+ ++ T+ L C+ L +LE G LH + K D
Sbjct: 592 YAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSD 651
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL +D + +I A GQGNKAL F M
Sbjct: 652 MFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLD 711
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD +TF G+L ACSH GLV+E HFN M +GI P+++H C+V ILGR G+
Sbjct: 712 EGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFD 771
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+ E+ I+ M ++ + + +LGA ++H+NL E+AA +L EL P+ SY++LSN ++
Sbjct: 772 ELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFA 831
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAG------------------ 260
+ +W VKR+R LM+ + +KK PGC +E +G VH FV
Sbjct: 832 TEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDR 891
Query: 261 ------FVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+VP VL ++ E EK+ L H+E+LA+ F L+S IRI KNLR+C D
Sbjct: 892 ELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRD 951
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSC 348
CH IS + N+E VV D RFHHFKNG+CSC
Sbjct: 952 CHDVMKHISSITNQEIVVRDVRRFHHFKNGACSC 985
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 22/131 (16%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE--------- 58
+ L +F + +G + T +S+L +C+ L + G +H +I+K ++
Sbjct: 498 DRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTAL 557
Query: 59 ------------VDVGLG-MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
DV ++++D+ T T +I A QG KAL YF +MQ GVKP+
Sbjct: 558 IDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNE 617
Query: 106 ITFVGVLVACS 116
T G L CS
Sbjct: 618 FTLAGCLSGCS 628
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 22/131 (16%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EE++ LF ++ ++ T+ SLL A T+ G L+ G +H + K E DV + AL
Sbjct: 397 EESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNAL 456
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+D+++ A + L CG ++ L FY M G P+
Sbjct: 457 VTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNM 516
Query: 106 ITFVGVLVACS 116
TF+ +L +CS
Sbjct: 517 YTFISILGSCS 527
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V + +++ LF+E+Q++G+ ++ T+ + L AC+ AL++G +H K + +D+
Sbjct: 189 VAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDL 248
Query: 62 GLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+G AL D+ +T L+ A G L+ F M
Sbjct: 249 FVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMEL 308
Query: 100 GVKPDAITFVGVLVACSHA 118
VK + T VL C+++
Sbjct: 309 DVKCNEFTLTTVLKGCANS 327
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 65/164 (39%), Gaps = 23/164 (14%)
Query: 31 SLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----------------------K 68
S+L C +L V +H I+K I D L ++L +
Sbjct: 117 SMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDR 176
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHF 128
DV++ TALI L G N ++ F EMQ G+ P+ T L ACS +D
Sbjct: 177 DVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLG-KQM 235
Query: 129 NLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALD 172
+ + K G+ + LV + + G I A ++ MP D
Sbjct: 236 HAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQND 279
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 4/140 (2%)
Query: 31 SLLLACTHLGALEVGMWLHPYIMKKNIEVD-VGLGMALK--DVMTLTALIVVLAMCGQGN 87
SL++ C + G +G L K + +D +G+ +K D++ +ALI L GQ
Sbjct: 338 SLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSE 397
Query: 88 KALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCL 147
++++ F+ M++ P+ T +L A ++ G + S + KYG + L
Sbjct: 398 ESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQS-IHACVWKYGFETDVAVSNAL 456
Query: 148 VYILGRAGRIAKAEELIKNM 167
V + + G + +L ++M
Sbjct: 457 VTMYMKNGCVHDGTKLYESM 476
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 283 bits (724), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 161/399 (40%), Positives = 229/399 (57%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +EA+ LF +Q G+ D T VSLL AC +GA+ +G W+H YI + +++
Sbjct: 194 YEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLN 253
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL K+++ TA+I M G G++A+E F EM
Sbjct: 254 VVLGTALMNMYSRCGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSF 313
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G +P+ +TFV VL AC+HAGLVDE F M ++YG+ PS+EH C+V +LGRAG +
Sbjct: 314 DGPRPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLN 373
Query: 159 KAEELIKNM-PMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A + IKN P V +LGAC++H N + A+ LL + P+N G YV+LSN Y
Sbjct: 374 EAYQFIKNTSPKEPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIY 433
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ + + +V++IR +M +KK G I+VD V+ F
Sbjct: 434 ALAGRMDRVEKIRNIMIRNRLKKEVGYSTIDVDHKVYLFSMGDKSHPKTNQIYLYLDELM 493
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+AG++P V+ +++EEE+E AL H+EKLAI FGL+ GV IRI+KNLR+C
Sbjct: 494 SRCREAGYIPASESVMHEVEEEEREYALRYHSEKLAIAFGLLKTGSGVAIRIVKNLRMCE 553
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTA IS + NRE V DR RFHHFK+GSCSC+D+W
Sbjct: 554 DCHTAIKYISIIANREINVRDRLRFHHFKDGSCSCQDYW 592
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 31/186 (16%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+E+LL +R + ++ T +++ + L A +G +H ++ +D + AL
Sbjct: 100 QESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGLDAYVQAAL 159
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
K V+ ++I G G +A+E F+ MQ GVKPD+
Sbjct: 160 VSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDS 219
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHY----GCLVYILGRAGRIAKAE 161
TFV +L AC+ G + +Y R + L+ + R G ++KA
Sbjct: 220 STFVSLLSACAQVGAIG-----LGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKAR 274
Query: 162 ELIKNM 167
E+ +M
Sbjct: 275 EVFDSM 280
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 283 bits (724), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 151/398 (37%), Positives = 221/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YVE E+ L +F E++ +G+ ++ T SL+ AC + ALE G LH +MK N + D
Sbjct: 219 YVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDED 278
Query: 61 VGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L D+ + +L+ V G G A++ F M
Sbjct: 279 PFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVD 338
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
RGVKP+AITF+ +L CSHAGLV+E + +F M + YG+ P EHY C++ +LGRAGR+
Sbjct: 339 RGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLK 398
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A+E I MP + F LGACRIH + E + AA++L++L P N G+ V+LSN Y+
Sbjct: 399 EAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYA 458
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEV------------------------DGVVH 254
+ R+W+ V+ +R M + N+KK PG ++V D ++
Sbjct: 459 NERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLD 518
Query: 255 EFVKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ AG+VP V DMD+ KE L+ H+E++A+ F L+S G I + KNLRVC D
Sbjct: 519 QIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVD 578
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A ISKV R+ +V D +RFHHF +GSCSC D+W
Sbjct: 579 CHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 616
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 26/177 (14%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEALL F+++ + +T D+ + S L AC L A + G +H ++K E D+ +G AL
Sbjct: 124 EEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNAL 183
Query: 68 KD-----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
D V++ T LI Q K L F E++ +G++P+
Sbjct: 184 TDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPN 243
Query: 105 AITFVGVLVACSHAGLVDERIS-HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA 160
TF ++ AC++ +++ H +M + P + LV + G+ G + +A
Sbjct: 244 EFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI--LVDMYGKCGLLEQA 298
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 283 bits (724), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 223/399 (55%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQ-HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ EAL LF + K + D+ T+ +L AC L A + G +H YIM+
Sbjct: 473 YSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
D + +L KD+++ T +I M G G +A+ F +M+
Sbjct: 533 DRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMR 592
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G++PD I+FV +L ACSH+GLVDE FN+M + I P++EHY C+V +L R G +
Sbjct: 593 QAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNL 652
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+KA I+NMP+ D + G LL CRIH +++ AER A+++ EL P+N G YV+++N Y
Sbjct: 653 SKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIY 712
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ + KW++VKR+R+ + +R ++K PGC IE+ G V+ FV
Sbjct: 713 AEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVR 772
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ G+ P L D +E EKE AL H+EKLA+ G++S G +IR+ KNLRVC
Sbjct: 773 ARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCG 832
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH +SK+ RE V+ D NRFH FK+G CSC+ FW
Sbjct: 833 DCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 13/163 (7%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EA+ LF E++ +G++ D T+ ++L C L+ G +H +I E D
Sbjct: 372 YAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIK----END 427
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+G D+ AL+ + A CG +A F EM+++ D I++ V+ S
Sbjct: 428 MGF-----DIFVSNALMDMYAKCGSMREAELVFSEMRVK----DIISWNTVIGGYSKNCY 478
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
+E +S FNL+ + P C++ K E+
Sbjct: 479 ANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREI 521
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
YV + E+ L +F ++ G+ D T+VS+ C + +G +H + +K
Sbjct: 271 YVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSRE 330
Query: 56 ----NIEVD-------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
N +D V M+ + V++ T++I A G +A++ F EM+
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE 123
G+ PD T VL C+ L+DE
Sbjct: 391 EGISPDVYTVTAVLNCCARNRLLDE 415
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 22/131 (16%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------------------ 54
LF+++ G+ D T + + + L ++ G LH YI+K
Sbjct: 182 LFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYL 241
Query: 55 KNIEVDVGLG----MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVG 110
KN VD M +DV++ ++I G K L F +M G++ D T V
Sbjct: 242 KNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVS 301
Query: 111 VLVACSHAGLV 121
V C+ + L+
Sbjct: 302 VFAGCADSRLI 312
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 283 bits (724), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 225/398 (56%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ EEA+ LFR ++ K + D +T+ S + AC +G+LE+ W+ YI D
Sbjct: 350 YVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRND 409
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + +L KDV+ +A++V + GQG +++ F+ M+
Sbjct: 410 VIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQ 469
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV P+ +TFVG+L AC ++GLV+E F+ M + YGI P +HY C+V +LGRAG +
Sbjct: 470 AGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRD-YGIEPRHQHYACVVDLLGRAGHLD 528
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + NMP+ V G LL AC+IH ++ E AA++L L P N G YV LSN Y+
Sbjct: 529 RAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYA 588
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
SS W V ++R LM E+ + K G +IE++G + F
Sbjct: 589 SSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLER 648
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AGFVP+ VL D++ EE E L H+E+LAI +GL+S PG +RI KNLR C++
Sbjct: 649 RLKEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGLISTPPGTTLRITKNLRACDN 708
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A +ISK+ +RE VV D RFHHFK+G+CSC D+W
Sbjct: 709 CHAAIKLISKLVSREIVVRDACRFHHFKDGACSCGDYW 746
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 22/127 (17%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-- 67
A+ ++ +Q ++ D + +L AC+ L ALE+G +H I + E DV + L
Sbjct: 157 AIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVA 216
Query: 68 --------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
+ +++ T++I A GQ +AL F EM+ V+PD I
Sbjct: 217 LYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIA 276
Query: 108 FVGVLVA 114
V VL A
Sbjct: 277 LVSVLRA 283
>gi|115473893|ref|NP_001060545.1| Os07g0662700 [Oryza sativa Japonica Group]
gi|24414187|dbj|BAC22429.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113612081|dbj|BAF22459.1| Os07g0662700 [Oryza sativa Japonica Group]
gi|125559498|gb|EAZ05034.1| hypothetical protein OsI_27217 [Oryza sativa Indica Group]
gi|125601406|gb|EAZ40982.1| hypothetical protein OsJ_25464 [Oryza sativa Japonica Group]
Length = 544
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 161/393 (40%), Positives = 225/393 (57%), Gaps = 52/393 (13%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI--EVDVGLGMA 66
EAL LFR + +G ++ T++S L AC GALE G W+H ++ +K + D LG A
Sbjct: 155 EALCLFRRMMAEGFAPNRGTVLSALAACAGAGALETGKWIHAFVERKRLFRWWDEFLGTA 214
Query: 67 LKDVM----------------------TLTALIVVLAMCGQGNKALEYFYEMQI-RGVKP 103
L D+ T A+I LAM G KAL+ F +M++ R V P
Sbjct: 215 LLDMYAKCGAVELALDVFTKLRSRNTCTWNAMINGLAMNGYSAKALDMFRKMELDRTVVP 274
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
D +TFVGVL+ACSH G VD HF+++ +KYGIR +EHY C+V +L R+G + +A ++
Sbjct: 275 DEVTFVGVLLACSHGGFVDVGREHFHMIEKKYGIRLILEHYACMVDLLARSGHLQEAHKI 334
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
I MPM D V LLG CR+H +++ AE A + E+ G +V+LSN Y++ +W
Sbjct: 335 IAGMPMKPDAVVWRALLGGCRLHKDVKMAETA---ISEMEATCSGDHVLLSNLYAAVGRW 391
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KA 259
V+ +R M + I+K PGC IE++ +HEFV +
Sbjct: 392 SGVEDVRRTMRSKGIEKIPGCSSIEINDSIHEFVSGDKSHPSYNDIHAKLAEISARMQQQ 451
Query: 260 GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
G+V +EV +D++EEEKE AL H+EKLAI FGL+ P V IRI+KNLR C DCH
Sbjct: 452 GYVTETAEVFYDVEEEEKEQALGHHSEKLAIAFGLIGGPPNVAIRIVKNLRFCADCHKFA 511
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
++S++Y+ E VV DR RFHHF G+CSC DFW
Sbjct: 512 KLVSQIYHWEIVVRDRARFHHFTEGACSCNDFW 544
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 213/398 (53%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV E+AL LF +++ + + T + AC LGAL+ G LH ++++ E
Sbjct: 411 YVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEAS 470
Query: 61 VGLGMALK----------------------DVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
G AL D ++ A+I L G G +ALE F +M
Sbjct: 471 NSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVA 530
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD I+F+ +L AC+HAGLVDE +F M +GI P +HY L+ +LGR+GRI
Sbjct: 531 EGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIG 590
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LIK MP + +L CR + ++E AA QL ++P + G+Y++LSN YS
Sbjct: 591 EARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYS 650
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ +W R+R+LM +R +KK PGC IEV +H F+
Sbjct: 651 AAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGA 710
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+VP+ VL DM+ EKE L H+EKLA+ FGL+ PG + ++KNLR+C D
Sbjct: 711 RMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGD 770
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA +SK RE VV D RFHHFK+G CSC ++W
Sbjct: 771 CHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 808
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/398 (37%), Positives = 221/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YVE E+ L +F E++ +G+ ++ T SL+ AC + ALE G LH +MK N + D
Sbjct: 284 YVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDED 343
Query: 61 VGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L D+ + +L+ V G G A++ F M
Sbjct: 344 PFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVD 403
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
RGVKP+AITF+ +L CSHAGLV+E + +F M + YG+ P EHY C++ +LGRAGR+
Sbjct: 404 RGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLK 463
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A+E I MP + F LGACRIH + E + AA++L++L P N G+ V+LSN Y+
Sbjct: 464 EAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYA 523
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEV------------------------DGVVH 254
+ R+W+ V+ +R M + N+KK PG ++V D ++
Sbjct: 524 NERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLD 583
Query: 255 EFVKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ AG+VP V DMD+ KE L+ H+E++A+ F L+S G I + KNLRVC D
Sbjct: 584 QIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVD 643
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A ISKV R+ +V D +RFHHF +GSCSC D+W
Sbjct: 644 CHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 26/177 (14%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEALL F+++ + +T D+ + S L AC L A + G +H ++K E D+ +G AL
Sbjct: 189 EEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNAL 248
Query: 68 KD-----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
D V++ T LI Q K L F E++ +G++P+
Sbjct: 249 TDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPN 308
Query: 105 AITFVGVLVACSHAGLVDERIS-HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA 160
TF ++ AC++ +++ H +M + P + LV + G+ G + +A
Sbjct: 309 EFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI--LVDMYGKCGLLEQA 363
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/391 (38%), Positives = 219/391 (56%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E+A+ LF E+ KGL D + SLL AC L A E G +H +++K+ DV G AL
Sbjct: 489 EDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNAL 548
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
K V++ +A+I LA G G +AL+ F M + P+
Sbjct: 549 VYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNH 608
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
IT VL AC+HAGLVDE +F+ M E +GI + EHY C++ +LGRAG++ A EL+
Sbjct: 609 ITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVN 668
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MP + V G LL A R+H + E + AA++L L P+ G++V+L+N Y+S+ W +
Sbjct: 669 SMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDE 728
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
V ++R+LM + +KK P +E+ VH F+ KAG+
Sbjct: 729 VAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLEELGDLMSKAGY 788
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VPN L D+D+ EKE L+ H+E+LA+ F L+S G IR+ KNLR+C DCH A
Sbjct: 789 VPNLEVDLHDVDKSEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHVAFKF 848
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISK+ +RE ++ D NRFHHF +G+CSC D+W
Sbjct: 849 ISKIVSREIIIRDINRFHHFSDGACSCGDYW 879
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE-RISH 127
+++ T++I L+ C G A++ F EM +G++PD +L AC+ ++ + H
Sbjct: 471 NIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVH 530
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
+L+ K+ + LVY + G I A+ +P
Sbjct: 531 AHLIKRKF--MTDVFAGNALVYTYAKCGSIEDADLAFSGLP 569
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 22/134 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V++ C +A+ LF E+ G+ ++ ++ ACT LE G +H +++ + D
Sbjct: 177 FVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKD 236
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V AL DV++ A I + G ALE +M+
Sbjct: 237 VFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKS 296
Query: 99 RGVKPDAITFVGVL 112
G+ P+ T +L
Sbjct: 297 SGLVPNVFTLSSIL 310
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/398 (37%), Positives = 217/398 (54%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL LF +++ +G ++ + S L C + ALE+G LH ++K E
Sbjct: 384 YSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETG 443
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G MA KD+++ +I + G G AL +F M+
Sbjct: 444 CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKR 503
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD T V VL ACSH GLVD+ +F M++ YG+ P+ +HY C+V +LGRAG +
Sbjct: 504 EGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLE 563
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A L+KNMP D + G LLGA R+H N E AE AA ++ + P+N G YV+LSN Y+
Sbjct: 564 DAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYA 623
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
SS +W V ++R M ++ +KK PG IE+ H F
Sbjct: 624 SSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDL 683
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
KAG+V S VL D++EEEKE + H+E+LA+ +G++ G IR+IKNLRVC D
Sbjct: 684 RMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCED 743
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ++++ R ++ D NRFHHFK+GSCSC D+W
Sbjct: 744 CHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 154/399 (38%), Positives = 222/399 (55%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKG-LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ EA+ ++ ++ +G + ++ T VS+L AC+ GAL GM LH ++K + +
Sbjct: 425 YAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYL 484
Query: 60 DVGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQ 97
DV + +L D+ + LI G G KA+ F EM
Sbjct: 485 DVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEML 544
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GVKPD ITFV +L ACSH+GLVDE F +M YGI PS++HYGC+V + GRAG++
Sbjct: 545 DEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQL 604
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
A + IK+M + D + G LL ACR+H N++ + A++ L E+ P++ G +V+LSN Y
Sbjct: 605 ETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMY 664
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
+S+ KW+ V IR + + ++K PG +EVD V F
Sbjct: 665 ASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQ 724
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+VP+ VL D++++EKE L H+E+LAI F L++ IRI KNLRVC
Sbjct: 725 AKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCG 784
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+ T ISK+ RE +V D NRFHHFKNG CSC D+W
Sbjct: 785 DCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 28/142 (19%)
Query: 1 YVEDSACEEALLLFREVQHKGLTG-DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y + +EAL L GL D VT+VSLL ACT G G+ +H Y +K +E
Sbjct: 226 YCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLES 280
Query: 60 DVGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
++ + M ++D+++ ++I + Q +A+ F EM+
Sbjct: 281 ELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMR 340
Query: 98 IRGVKPDAITFVGVLVACSHAG 119
+ ++PD +T + + S G
Sbjct: 341 LSRIQPDCLTLISLASILSQLG 362
Score = 40.8 bits (94), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 27/184 (14%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV-DVGLGMAL- 67
A+ LF+E++ + D +T++SL + LG + + + ++K + D+ +G A+
Sbjct: 332 AISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVV 391
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG-VKPDA 105
DV++ +I A G ++A+E + M+ G + +
Sbjct: 392 VMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQ 451
Query: 106 ITFVGVLVACSHAGLVDERIS-HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
T+V VL ACS AG + + + H L+ K G+ + L + G+ GR+ A L
Sbjct: 452 GTWVSVLPACSQAGALRQGMKLHGRLL--KNGLYLDVFVVTSLADMYGKCGRLEDALSLF 509
Query: 165 KNMP 168
+P
Sbjct: 510 YQIP 513
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 222/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEA LF E++ G + T SLL + +GA+ G +H I+K + +
Sbjct: 326 YAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSN 385
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL +V++ T++I A G +ALE F++M
Sbjct: 386 LHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLE 445
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV P+ +T++ VL ACSH GL+ E + HF M ++GI P +EHY C+V +LGR+G +
Sbjct: 446 AGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLE 505
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A EL+ +MP D VL LGACR+H N++ + AA+ +LE P + +Y++LSN ++
Sbjct: 506 EAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHA 565
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S+ +W++V IR+ M ERN+ K GC IEV+ VH+F
Sbjct: 566 SAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLAL 625
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G++P+ VL D++EE+KE L H+EK+A+ +G +S IR+ KNLRVC D
Sbjct: 626 KIKELGYIPSTDFVLHDVEEEQKEQYLFQHSEKIAVAYGFISTSTSRPIRVFKNLRVCGD 685
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA S V +E V+ D NRFHHFK+G+CSC D+W
Sbjct: 686 CHTAFKYFSIVRRKEIVLRDANRFHHFKDGTCSCNDYW 723
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 26/135 (19%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
+A+ LF ++ G D+ T+ ++ AC +G L +G H +MK +++DV +G +L
Sbjct: 128 DAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLV 187
Query: 69 D-------------------------VMTLTALIVVLAMCGQGNK-ALEYFYEMQIRGVK 102
D VM+ TA+I G ++ A+E F EM VK
Sbjct: 188 DMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVK 247
Query: 103 PDAITFVGVLVACSH 117
P+ TF VL AC++
Sbjct: 248 PNHFTFSSVLKACAN 262
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 24/145 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN-IEV 59
Y + EA+ F ++ G ++ + AC++ + +G + +++K E
Sbjct: 17 YANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFGFLLKTGYFES 76
Query: 60 DVGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM 96
DV +G AL ++V+T T +I G A++ F +M
Sbjct: 77 DVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDM 136
Query: 97 QIRGVKPDAITFVGVLVACSHAGLV 121
+ G PD T GV+ AC+ GL+
Sbjct: 137 VLSGYVPDRFTLSGVVSACAEMGLL 161
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 81/192 (42%), Gaps = 28/192 (14%)
Query: 1 YVEDSACE-EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
YV+ C+ EA+ LF E+ + + T S+L AC +L + +G ++ ++K +
Sbjct: 224 YVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLAS 283
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+G +L K++++ ++ A +A E F E++
Sbjct: 284 INCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIE 343
Query: 98 IRGVKPDAITFVGVLVACSHAGLV--DERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
G +A TF +L S G + E+I H ++ K G + ++ L+ + R G
Sbjct: 344 GAGTGVNAFTFASLLSGASSIGAIGKGEQI-HSRIL--KSGFKSNLHICNALISMYSRCG 400
Query: 156 RIAKAEELIKNM 167
I A ++ M
Sbjct: 401 NIEAAFQVFNEM 412
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 147/397 (37%), Positives = 221/397 (55%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V++ ++AL ++ ++ + D+ T +L+ A + + ALE G LH ++K + D
Sbjct: 469 VDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDP 528
Query: 62 GLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+G +L D + A++V LA G +A+ F M+
Sbjct: 529 FVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSH 588
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G++PD ++F+G+L ACSHAGL E + + M YGI P IEHY CLV LGRAG + +
Sbjct: 589 GIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQE 648
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A+++I+ MP + LLGACRI ++E +R A +L L P + +YV+LSN Y++
Sbjct: 649 ADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAA 708
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
+ +W V R++M +N+KK PG I+V ++H FV
Sbjct: 709 ANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKT 768
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+ G+VP+ VL D+++EEKE +L H+EKLAI +GL+S IR+IKNLRVC DC
Sbjct: 769 IREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDC 828
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H A ISKV+ RE V+ D NRFHHF++G CSC D+W
Sbjct: 829 HNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 865
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 30/193 (15%)
Query: 3 EDSACEEALLLFREVQHKGLTGDKVTMVSLLL-----ACTHLGALEVGMWLHPYIMKKNI 57
+ S EE++ LF ++ H+GL D T+ S+ L AC L L+ G +H + +K
Sbjct: 364 QSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGF 423
Query: 58 EVDVG-----LGMALK-----------------DVMTLTALIVVLAMCGQGNKALEYFYE 95
+ D+ L M +K D + T++I G ++AL ++
Sbjct: 424 DSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHR 483
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRA 154
M+ V PD TF ++ A S +++ R H N++ P + LV + +
Sbjct: 484 MRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAKC 541
Query: 155 GRIAKAEELIKNM 167
G I A L K M
Sbjct: 542 GNIEDAYRLFKKM 554
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 80/203 (39%), Gaps = 24/203 (11%)
Query: 4 DSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL 63
D +E L LFR ++ + ++T+ +L C + G L +H Y +K +E DV +
Sbjct: 161 DGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFV 220
Query: 64 GMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV 101
AL +DV+ ++ G +A + F E G+
Sbjct: 221 SGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGL 280
Query: 102 KPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA 160
+PD + +L C AG D E + ++ K G+ + LV + + G A
Sbjct: 281 RPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFA 340
Query: 161 EELIKNMPMALDHFVLGGLLGAC 183
E+ +M LD ++ +C
Sbjct: 341 REVFNDMKH-LDLISWNSMISSC 362
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 58/140 (41%), Gaps = 24/140 (17%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGA--LEVGMWLHPYIMKKNIE 58
YV+ +EA LF E GL D+ ++ +L C G LE+G +H +K ++
Sbjct: 259 YVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLD 318
Query: 59 VDVGLGMALK----------------------DVMTLTALIVVLAMCGQGNKALEYFYEM 96
DV + +L D+++ ++I A +++ F ++
Sbjct: 319 SDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDL 378
Query: 97 QIRGVKPDAITFVGVLVACS 116
G+KPD T + +A +
Sbjct: 379 LHEGLKPDHFTLASITLATA 398
>gi|77553572|gb|ABA96368.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 605
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 146/394 (37%), Positives = 222/394 (56%), Gaps = 46/394 (11%)
Query: 5 SACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG 64
SA + L LF + + +++T+V+++ AC LGA+ G+W H Y +K+ + V+ +
Sbjct: 212 SAADAILELFVRMLSLAIEPNEITLVAVIGACGELGAVSHGVWAHTYAVKRRLAVNCIVA 271
Query: 65 MAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVK 102
AL +D A++ LA+ G G AL M GV
Sbjct: 272 TALVEMYAGCGRLDLAEQVFAAASDRDTRCYNAMLHGLAVHGHGRAALSLLDRMHGAGVP 331
Query: 103 PDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE 162
D +T + V+ AC+HAGLVDE + +F+ M ++GI P IEHYGC++ +L RAGR+ AE+
Sbjct: 332 VDGVTVLSVMCACAHAGLVDEGLDYFDRMEIEFGIEPRIEHYGCMIDMLSRAGRLNNAEK 391
Query: 163 LIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRK 222
LI M + + + L+ AC IH LE E+ +L+ L PD+ G++V++SN Y+ + +
Sbjct: 392 LIHEMLIVPNAAIYRSLIRACGIHGKLELGEKMIAELMRLEPDDSGNHVLISNFYARTNR 451
Query: 223 WKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF------------------------VK 258
W+ K+ R+ M I K PG L++++GV+HEF ++
Sbjct: 452 WEDAKKARKEMKSMGIDKNPGSSLVDINGVLHEFLVGDKTHPASKEIYTMVEEIETRLIE 511
Query: 259 AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTA 318
G + S LFD++EE+K L+ H+E+LAI F L++ PG IRIIKNLRVC DCH +
Sbjct: 512 CGRRSSTSSALFDVEEEDKADTLSYHSERLAIAFALIASNPGAPIRIIKNLRVCADCHES 571
Query: 319 TNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
++S+VY RE V+ DR RFHHF++G CSC DFW
Sbjct: 572 AKLVSRVYGREIVMRDRTRFHHFRDGVCSCGDFW 605
>gi|125578382|gb|EAZ19528.1| hypothetical protein OsJ_35094 [Oryza sativa Japonica Group]
Length = 591
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/394 (37%), Positives = 222/394 (56%), Gaps = 46/394 (11%)
Query: 5 SACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG 64
SA + L LF + + +++T+V+++ AC LGA+ G+W H Y +K+ + V+ +
Sbjct: 198 SAADAILELFVRMLSLAIEPNEITLVAVIGACGELGAVSHGVWAHTYAVKRRLAVNCIVA 257
Query: 65 MAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVK 102
AL +D A++ LA+ G G AL M GV
Sbjct: 258 TALVEMYAGCGRLDLAEQVFAAASDRDTRCYNAMLHGLAVHGHGRAALSLLDRMHGAGVP 317
Query: 103 PDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE 162
D +T + V+ AC+HAGLVDE + +F+ M ++GI P IEHYGC++ +L RAGR+ AE+
Sbjct: 318 VDGVTVLSVMCACAHAGLVDEGLDYFDRMEIEFGIEPRIEHYGCMIDMLSRAGRLNNAEK 377
Query: 163 LIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRK 222
LI M + + + L+ AC IH LE E+ +L+ L PD+ G++V++SN Y+ + +
Sbjct: 378 LIHEMLIVPNAAIYRSLIRACGIHGKLELGEKMIAELMRLEPDDSGNHVLISNFYARTNR 437
Query: 223 WKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF------------------------VK 258
W+ K+ R+ M I K PG L++++GV+HEF ++
Sbjct: 438 WEDAKKARKEMKSMGIDKNPGSSLVDINGVLHEFLVGDKTHPASKEIYTMVEEIETRLIE 497
Query: 259 AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTA 318
G + S LFD++EE+K L+ H+E+LAI F L++ PG IRIIKNLRVC DCH +
Sbjct: 498 CGRRSSTSSALFDVEEEDKADTLSYHSERLAIAFALIASNPGAPIRIIKNLRVCADCHES 557
Query: 319 TNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
++S+VY RE V+ DR RFHHF++G CSC DFW
Sbjct: 558 AKLVSRVYGREIVMRDRTRFHHFRDGVCSCGDFW 591
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 153/398 (38%), Positives = 223/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLH---------PY 51
Y ++ EEA+ +F E+Q G+ D T+ S++ +C +L +LE G H +
Sbjct: 346 YGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISF 405
Query: 52 IMKKNIEVD-------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
I N + + M ++D ++ TAL+ A G+ N+ + F M
Sbjct: 406 ITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLA 465
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD +TF+GVL ACS AGLV++ + +F M +++GI P ++H C++ +LGRAGR+
Sbjct: 466 HGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLE 525
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A I NMP D LL +CR+H ++E + AA L+ L P N SYV+LS+ Y+
Sbjct: 526 EARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYA 585
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
S KW KV ++R M ++ ++K PG I+ G VH F
Sbjct: 586 SKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNY 645
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
++ G+VP+ S VL D++E EK LN H+EKLAI FGL+ PG+ IR+IKNLRVC D
Sbjct: 646 KMIEEGYVPDMSSVLHDVEESEKIKMLNHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGD 705
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT ISK+ RE +V D RFH FK+G+CSC DFW
Sbjct: 706 CHNATKFISKITQREILVRDAVRFHLFKDGTCSCGDFW 743
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 23/181 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL +FRE++ G D+ T S+L AC L AL G +H Y+++ + + +V +G AL
Sbjct: 253 EALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALV 312
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
K+V++ TA++V G +A++ F+EMQ GV+PD
Sbjct: 313 DMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDF 372
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
T V+ +C++ ++E + F+ + G+ I L+ + G+ G + L
Sbjct: 373 TLGSVISSCANLASLEEG-AQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTE 431
Query: 167 M 167
M
Sbjct: 432 M 432
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 64 GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC-SHAGLVD 122
G+ +D ++ T +I L G +AL+ F EM++ G D TF VL AC S L +
Sbjct: 229 GLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGE 288
Query: 123 ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
+ H ++ + + ++ LV + + I AE + K MP
Sbjct: 289 GKQIHAYVIRTDH--KDNVFVGSALVDMYSKCRSIKSAETVFKRMP 332
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 147/397 (37%), Positives = 221/397 (55%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V++ ++AL ++ ++ + D+ T +L+ A + + ALE G LH ++K + D
Sbjct: 107 VDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDP 166
Query: 62 GLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+G +L D + A++V LA G +A+ F M+
Sbjct: 167 FVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSH 226
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G++PD ++F+G+L ACSHAGL E + + M YGI P IEHY CLV LGRAG + +
Sbjct: 227 GIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQE 286
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A+++I+ MP + LLGACRI ++E +R A +L L P + +YV+LSN Y++
Sbjct: 287 ADKVIETMPFKASASINRALLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAA 346
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
+ +W V R++M +N+KK PG I+V ++H FV
Sbjct: 347 ANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKT 406
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+ G+VP+ VL D+++EEKE +L H+EKLAI +GL+S IR+IKNLRVC DC
Sbjct: 407 IREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDC 466
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H A ISKV+ RE V+ D NRFHHF++G CSC D+W
Sbjct: 467 HNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 503
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 25/190 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ + ++AL LF + G D++T+ + AC L L+ G +H + +K + D
Sbjct: 5 YIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSD 64
Query: 61 VG-----LGMALK-----------------DVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L M +K D + T++I G ++AL ++ M+
Sbjct: 65 LHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQ 124
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V PD TF ++ A S +++ R H N++ P + LV + + G I
Sbjct: 125 SRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAKCGNI 182
Query: 158 AKAEELIKNM 167
A L K M
Sbjct: 183 EDAYRLFKKM 192
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/399 (38%), Positives = 220/399 (55%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +EA+ LFR + G + T+ ++L C L L+ G +H ++ +E
Sbjct: 300 YEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQS 359
Query: 61 VGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ A+ K+ +T T++IV LA GQG +A+ F EM
Sbjct: 360 SSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEML 419
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV+PD IT+VGVL ACSHAG V+E +++ + ++ I P + HY C+V +L RAG
Sbjct: 420 RAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLF 479
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
++A+E I+ MP+ D G LL ACR+H N E AE AA++LL + P+N G+Y ++N Y
Sbjct: 480 SEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVY 539
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEV---------DGVVH-------------- 254
S+ +W RI + E+ ++K G + D VVH
Sbjct: 540 SACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMW 599
Query: 255 -EFVKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
E AGFVP+ VL D+D+E KE L+ H+EKLAI FGL+S +R++KNLRVCN
Sbjct: 600 EEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCN 659
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A ISKV +RE +V D RFHHF++G CSCKD+W
Sbjct: 660 DCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 113/273 (41%), Gaps = 29/273 (10%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EA+ ++ G T + T+ ++L +C A VG +H +++K +GLG
Sbjct: 41 EAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVK------LGLGSC-- 92
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHF 128
V +++ + CG A F M +R V ++ ++ +H G +D S F
Sbjct: 93 -VPVANSVLNMYGKCGDSETATTVFERMPVRSVS----SWNAMVSLNTHLGRMDLAESLF 147
Query: 129 NLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM----PMALDHFVLGGLLGACR 184
M ++ SI + ++ + G AKA +L M MA D F + +L AC
Sbjct: 148 ESMPDR-----SIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACA 202
Query: 185 IHDNLEAAERAAQQLLEL-LPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPG 243
N+ ++ +L + N L + Y+ S + +RI + E ++
Sbjct: 203 NLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLN---- 258
Query: 244 CILIEVDGVVHEFVKAGFVPNKSEVLFDMDEEE 276
+I ++ +VK G + + E+ M+ +
Sbjct: 259 --VISFTALLEGYVKIGDMESAREMFGVMNNRD 289
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 56/178 (31%)
Query: 1 YVEDSACEEALLLFREVQHKG-LTGDKVTMVSLLLACTHLGALEVGMWLHPY-------- 51
Y ++ +AL LF + H+ + D+ T+ S+L AC +LG + +G +H Y
Sbjct: 165 YNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAY 224
Query: 52 -----------------------IMKKNIEVD-------------VGLG----------- 64
IM +++E D V +G
Sbjct: 225 NSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGV 284
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
M +DV+ TA+IV G+ ++A++ F M G +P++ T VL C+ +D
Sbjct: 285 MNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLD 342
>gi|297819366|ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323404|gb|EFH53825.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 591
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/403 (39%), Positives = 224/403 (55%), Gaps = 51/403 (12%)
Query: 1 YVEDSACEEALLLFREVQH---KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI 57
Y+ + + L+LF ++++ + + D VT + L AC +LGAL+ G +H +I + +
Sbjct: 189 YLRNKRTRDVLVLFDKMKNDVDRCVKPDNVTCLLALQACANLGALDFGKQVHDFIDENGL 248
Query: 58 EVDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYE 95
+ L L ++V++ TA+I LAM G G +A+E F E
Sbjct: 249 SGALNLSNTLVSMYSRCGSMDKAYEVFNRMRERNVVSWTAMISGLAMNGFGKEAIEAFNE 308
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLM-SEKYGIRPSIEHYGCLVYILGRA 154
M G+ P+ T G+L ACSH+GLVDE + F+ M S ++ I+P++ HYGC+V +LGRA
Sbjct: 309 MLKFGISPEEQTLTGLLSACSHSGLVDEGMMFFDRMRSGEFKIKPNLHHYGCIVDLLGRA 368
Query: 155 GRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILS 214
+ KA LIK+M M D + LLGACR+H N+E ER L+E + G YV+L
Sbjct: 369 RLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGNVELGERVIAHLIEFKAEEAGDYVLLL 428
Query: 215 NRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK---------------- 258
N YSS KW+KV +R LM ++ I+ PGC IE+ G VHEF+
Sbjct: 429 NTYSSVGKWEKVTELRSLMKKKRIQTNPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLA 488
Query: 259 --------AGFVPNKSEVLFDMD-EEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNL 309
AG+V + L ++D EEEK AL H+EKLAI FG++ P IR+ KNL
Sbjct: 489 EINQQLKIAGYVAEITSELHNLDSEEEKGYALRYHSEKLAIAFGILVTPPETTIRVTKNL 548
Query: 310 RVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
R C DCH +S VY+R +V DR+RFHHFK GSCSC DFW
Sbjct: 549 RTCVDCHNFAKFVSDVYDRVVIVRDRSRFHHFKGGSCSCNDFW 591
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 223/398 (56%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EA+ F ++Q + + D TMVS++ A L L W+H +++ ++ +
Sbjct: 453 YAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKN 512
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL D V T A+I G G ALE F +M+
Sbjct: 513 VFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKK 572
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+KP+ +TF+ VL ACSH+GLV+E +F M + YG+ P+++HYG +V +LGRA R+
Sbjct: 573 EVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLN 632
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I+ MP+ V G +LGACRIH N+E E+AA ++ +L PD+GG +V+L+N Y+
Sbjct: 633 EAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYA 692
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
++ W KV R+R M ++ I+K PG ++E+ VH F
Sbjct: 693 TASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGN 752
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG++P+ + V D+++ KE LN H+EKLAI F L++ PG I + KNLRVC D
Sbjct: 753 RIKAAGYMPDTNSV-HDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGTTIHLRKNLRVCGD 811
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT IS V RE +V D RFHHFK+G+CSC D+W
Sbjct: 812 CHNATKYISLVTKREIIVRDMRRFHHFKDGTCSCGDYW 849
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 25/190 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ + AL L +Q +G D +T+VS+L A +G+L +G +H Y M+ E
Sbjct: 251 YAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESF 310
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL K V++ ++I G A+E F +M
Sbjct: 311 VNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMD 370
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V+ +T +G L AC+ G V++ R H L + G S+ L+ + + R+
Sbjct: 371 EQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSV--MNSLISMYSKCKRV 428
Query: 158 AKAEELIKNM 167
A E+ +N+
Sbjct: 429 DIAAEIFENL 438
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 69/136 (50%), Gaps = 22/136 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ A+ +F+++ + + VT++ L AC LG +E G ++H + + + D
Sbjct: 352 YVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSD 411
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + +L K +++ A+I+ A G+ N+A++YF +MQ+
Sbjct: 412 VSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQL 471
Query: 99 RGVKPDAITFVGVLVA 114
+ +KPD+ T V V+ A
Sbjct: 472 QNIKPDSFTMVSVIPA 487
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 144/378 (38%), Positives = 212/378 (56%), Gaps = 47/378 (12%)
Query: 22 LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-------------- 67
L D TM +L AC L ALE G +H YI++ D + AL
Sbjct: 290 LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 349
Query: 68 --------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
KD+++ T +I M G GN+A+ F EM+ G++PD ++F+ +L ACSH+G
Sbjct: 350 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 409
Query: 120 LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGL 179
L+++ F +M + I P +EHY C+V +L R G ++KA + I+ +P+A D + G L
Sbjct: 410 LLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGAL 469
Query: 180 LGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIK 239
L CRI+ ++E AE+ A+++ EL P+N G YV+L+N Y+ + KW++VKR+RE + ++ ++
Sbjct: 470 LCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLR 529
Query: 240 KPPGCILIEVDGVVHEFVKA-------------------------GFVPNKSEVLFDMDE 274
K PGC IE+ G V+ FV G+ P L + DE
Sbjct: 530 KNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADE 589
Query: 275 EEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMD 334
+KE AL H+EKLA+ FGL++ P IR+ KNLRVC DCH +SK RE V+ D
Sbjct: 590 MQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRD 649
Query: 335 RNRFHHFKNGSCSCKDFW 352
NRFHHFK+G CSC+ FW
Sbjct: 650 SNRFHHFKDGYCSCRGFW 667
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 64/144 (44%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV + E L +++++ + G+ D T++S+L+ C G L +G +H +K + E
Sbjct: 88 YVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERR 147
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ M ++V++ T++I G + A+ +M+
Sbjct: 148 INFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEK 207
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
GVK D + +L AC+ +G +D
Sbjct: 208 EGVKLDVVAITSILHACARSGSLD 231
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 19/126 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y D + A++L ++++ +G+ D V + S+L AC G+L+ G +H YI N+
Sbjct: 189 YTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMA-- 246
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV----------KPDAITFVG 110
++ AL+ + A CG A F M ++ + KPD+ T
Sbjct: 247 -------SNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMAC 299
Query: 111 VLVACS 116
+L AC+
Sbjct: 300 ILPACA 305
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/399 (39%), Positives = 225/399 (56%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ E A+ LF ++ + + +T+ S L AC LGAL +G WLH I ++++E +
Sbjct: 389 YAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPN 448
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL K+V++ A+I + GQG +AL+ + +M
Sbjct: 449 VYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLD 508
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ P + TF+ VL ACSH GLV+E F M++ Y I P IEH C+V +LGRAG++
Sbjct: 509 AHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLK 568
Query: 159 KAEELIKNMP-MALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A ELI P A+ V G LLGAC +H + + A+ A+Q+L EL P+N G YV+LSN +
Sbjct: 569 EAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSNLH 628
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF--------------------- 256
+S +++ + +R+ R + K PG LIE+ H F
Sbjct: 629 TSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIYSYLEKLT 688
Query: 257 ---VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
++AG+ P L+D++EEEKE + +H+EKLAI FGL+S PG IRIIKNLRVC
Sbjct: 689 AKMIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCL 748
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH AT ISKV R VV D +RFHHF++G CSC D+W
Sbjct: 749 DCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 71/177 (40%), Gaps = 23/177 (12%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----- 67
LF E+ GL + T+V+L+ + G + LH +++K + + A+
Sbjct: 300 LFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHC 359
Query: 68 -----------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVG 110
K + + A+I A G A+ F +M V+P+ IT
Sbjct: 360 RLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISS 419
Query: 111 VLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
L AC+ G + +++E+ + P++ L+ + + G I++A + M
Sbjct: 420 TLSACAQLGALSLGKWLHRIITEE-DLEPNVYVMTALIDMYAKCGSISEARRIFNTM 475
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 223/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----KN 56
YV++ EAL LFR++ + V S++ AC HL L +G LH Y+++ +N
Sbjct: 282 YVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRN 341
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
I + L M L D ++ TA+I+ A+ G G++A+ F EM+
Sbjct: 342 IFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKR 401
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+GVKP+ + FV VL ACSH GLVDE +FN M++ YG+ +EHY + +LGRAG++
Sbjct: 402 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 461
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I M + V LL +C +H NLE AE+ A+++ + +N G+YV++ N Y+
Sbjct: 462 EAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYA 521
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S+ +WK++ ++R + ++ ++K P C IE+ H FV
Sbjct: 522 SNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVME 581
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+V + S VL D+DEE K L H+E+LA+ FG+++ PG IR+ KN+R+C D
Sbjct: 582 QMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTD 641
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ISK+ RE +V D +RFHHF GSCSC D+W
Sbjct: 642 CHVAIKFISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + E+AL + RE+ L D T+ S+L + + G +H Y+++K I+ D
Sbjct: 181 YAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSD 240
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G +L +D ++ +L+ G+ N+AL F +M
Sbjct: 241 VYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVS 300
Query: 99 RGVKPDAITFVGVLVACSH 117
V+P A+ F V+ AC+H
Sbjct: 301 AKVRPGAVAFSSVIPACAH 319
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 78/190 (41%), Gaps = 25/190 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + S AL F E++ G D S+L +CT + L G +H +I++ ++ D
Sbjct: 80 FTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCD 139
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ G AL KDV++ +I A G AL EM
Sbjct: 140 LYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGT 199
Query: 99 RGVKPDAITFVGVL-VACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+KPDA T VL + + ++ + H ++ + GI + LV + ++ RI
Sbjct: 200 SDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVI--RKGIDSDVYIGSSLVDMYAKSARI 257
Query: 158 AKAEELIKNM 167
+E + ++
Sbjct: 258 EDSERVFSHL 267
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/393 (40%), Positives = 221/393 (56%), Gaps = 49/393 (12%)
Query: 9 EALLLFREVQHKG--LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV------- 59
EAL LF ++ + + T+ L+AC LGAL G +H Y+++ E
Sbjct: 460 EALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVAN 519
Query: 60 ----------DVGLGMALKDVM------TLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
DV + D M + T+L+ M G+G +AL+ FYEMQ G+ P
Sbjct: 520 CLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVP 579
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
D +TFV VL ACSH+G+VD+ I++FN M++ +G+ P EHY C+V +L RAGR+ +A EL
Sbjct: 580 DGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMEL 639
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
I+ MPM V LL ACR++ N+E E AA QLLEL N GSY +LSN Y+++R W
Sbjct: 640 IRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCW 699
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVHEF-----------------------VKA- 259
K V RIR LM IKK PGC ++ F +KA
Sbjct: 700 KDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKAL 759
Query: 260 GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
G+VP+ L D+D+EEK L+ H+EKLA+ +G+++ PG IRI KNLR C DCH+A
Sbjct: 760 GYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAF 819
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS + E +V D +RFHHFKNGSCSC+ +W
Sbjct: 820 TYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 10/132 (7%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E+ L L+R +Q G D T +L AC + + G +H + E +V +G
Sbjct: 108 EDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVG--- 164
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISH 127
L+ + CG A + F EM+ RGV D +++ ++ A G +
Sbjct: 165 ------NGLVSMYGRCGAWENARQVFDEMRERGVG-DLVSWNSIVAAYMQGGDSIRAMKM 217
Query: 128 FNLMSEKYGIRP 139
F M+E GIRP
Sbjct: 218 FERMTEDLGIRP 229
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 23/154 (14%)
Query: 1 YVEDSACEEALLLF-REVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y++ A+ +F R + G+ D V++V++L AC +GA G +H Y ++ +
Sbjct: 205 YMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFE 264
Query: 60 DVGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
DV +G M +KDV++ A++ + G+ + AL F +++
Sbjct: 265 DVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIR 324
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLM 131
++ + +T+ V+ + GL E + F M
Sbjct: 325 EEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQM 358
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 15/110 (13%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEAL +F E+Q GL D VT V +L AC+H G ++ G+ Y N + V G
Sbjct: 563 EEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGI---NYFNGMNKDFGVVPGAE- 618
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG--VKPDAITFVGVLVAC 115
++ +L+ G+ ++A+E IRG +KP +V +L AC
Sbjct: 619 ----HYACMVDLLSRAGRLDEAMEL-----IRGMPMKPTPAVWVALLSAC 659
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/399 (38%), Positives = 220/399 (55%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +EA+ LFR + G + T+ ++L C L L+ G +H ++ +E
Sbjct: 406 YEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERS 465
Query: 61 VGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ A+ K+ +T T++IV LA GQG +A+ F EM
Sbjct: 466 SSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEML 525
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV+PD IT+VGVL ACSHAG V+E +++ + ++ I P + HY C+V +L RAG
Sbjct: 526 RAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLF 585
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
++A+E I+ MP+ D G LL ACR+H N E AE AA++LL + P+N G+Y ++N Y
Sbjct: 586 SEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVY 645
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEV---------DGVVH-------------- 254
S+ +W RI + E+ ++K G + D VVH
Sbjct: 646 SACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMW 705
Query: 255 -EFVKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
E AGFVP+ VL D+D+E KE L+ H+EKLAI FGL+S +R++KNLRVCN
Sbjct: 706 EEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCN 765
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A ISKV +RE +V D RFHHF++G CSCKD+W
Sbjct: 766 DCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 112/273 (41%), Gaps = 29/273 (10%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EA+ ++ G T + T+ ++L +C A VG +H +++K +GLG
Sbjct: 147 EAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVK------LGLGSC-- 198
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHF 128
V +++ + CG A F M +R V ++ ++ +H G +D S F
Sbjct: 199 -VPVANSVLNMYGKCGDAETASTVFERMPVRSVS----SWNAMVSLNTHLGRMDLAESLF 253
Query: 129 NLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM----PMALDHFVLGGLLGACR 184
M + SI + ++ + G AKA +L M MA D F + +L AC
Sbjct: 254 ESMPGR-----SIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACA 308
Query: 185 IHDNLEAAERAAQQLLEL-LPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPG 243
N+ ++ +L + N L + Y+ S + +RI + E ++
Sbjct: 309 NLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLN---- 364
Query: 244 CILIEVDGVVHEFVKAGFVPNKSEVLFDMDEEE 276
+I ++ +VK G + + E+ M+ +
Sbjct: 365 --VISFTALLEGYVKIGDMESAREMFGVMNNRD 395
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 56/178 (31%)
Query: 1 YVEDSACEEALLLFREVQHKG-LTGDKVTMVSLLLACTHLGALEVGMWLHPY-------- 51
Y ++ +AL LF + H+ + D+ T+ S+L AC +LG + +G +H Y
Sbjct: 271 YNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAY 330
Query: 52 -----------------------IMKKNIEVD-------------VGLG----------- 64
IM +++E D V +G
Sbjct: 331 NSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGV 390
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
M +DV+ TA+IV G+ ++A++ F M G +P++ T VL C+ +D
Sbjct: 391 MNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLD 448
>gi|115458888|ref|NP_001053044.1| Os04g0469400 [Oryza sativa Japonica Group]
gi|113564615|dbj|BAF14958.1| Os04g0469400, partial [Oryza sativa Japonica Group]
Length = 401
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/399 (38%), Positives = 219/399 (54%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ E+ EA+ LF ++ + G+ D V +V +L A L +L G +H ++++ V+
Sbjct: 3 FAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVE 62
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +L KDV+ TA+I M G G +A+ F M
Sbjct: 63 GAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLE 122
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV PD ++F+ +L ACSH+ LVDE + ++M KY ++P EHY C+V +LGR+G+
Sbjct: 123 TGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTE 182
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + IK+MP+ V LLGACRIH N E A A +LLEL PDN G+YV++SN ++
Sbjct: 183 EAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFA 242
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
KW VK IR M E+ ++K P C IE+ VH F
Sbjct: 243 EMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITE 302
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ +V + S VL D+ EEEK L+ H+E+LAI+FGL+S G +RI KNLRVC
Sbjct: 303 KLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCG 362
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH T ++SK++ RE VV D NRFHHF G+CSC DFW
Sbjct: 363 DCHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 401
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/399 (38%), Positives = 220/399 (55%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +EA+ LFR + G + T+ ++L C L L+ G +H ++ +E
Sbjct: 406 YEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQS 465
Query: 61 VGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ A+ K+ +T T++IV LA GQG +A+ F EM
Sbjct: 466 SSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEML 525
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV+PD IT+VGVL ACSHAG V+E +++ + ++ I P + HY C+V +L RAG
Sbjct: 526 RAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLF 585
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
++A+E I+ MP+ D G LL ACR+H N E AE AA++LL + P+N G+Y ++N Y
Sbjct: 586 SEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVY 645
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEV---------DGVVH-------------- 254
S+ +W RI + E+ ++K G + D VVH
Sbjct: 646 SACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMW 705
Query: 255 -EFVKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
E AGFVP+ VL D+D+E KE L+ H+EKLAI FGL+S +R++KNLRVCN
Sbjct: 706 EEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCN 765
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A ISKV +RE +V D RFHHF++G CSCKD+W
Sbjct: 766 DCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 113/273 (41%), Gaps = 29/273 (10%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EA+ ++ G T + T+ ++L +C A VG +H +++K +GLG
Sbjct: 147 EAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVK------LGLGSC-- 198
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHF 128
V +++ + CG A F M +R V ++ ++ +H G +D S F
Sbjct: 199 -VPVANSVLNMYGKCGDSETATTVFERMPVRSVS----SWNAMVSLNTHLGRMDLAESLF 253
Query: 129 NLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM----PMALDHFVLGGLLGACR 184
M ++ SI + ++ + G AKA +L M MA D F + +L AC
Sbjct: 254 ESMPDR-----SIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACA 308
Query: 185 IHDNLEAAERAAQQLLEL-LPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPG 243
N+ ++ +L + N L + Y+ S + +RI + E ++
Sbjct: 309 NLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLN---- 364
Query: 244 CILIEVDGVVHEFVKAGFVPNKSEVLFDMDEEE 276
+I ++ +VK G + + E+ M+ +
Sbjct: 365 --VISFTALLEGYVKIGDMESAREMFGVMNNRD 395
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 56/178 (31%)
Query: 1 YVEDSACEEALLLFREVQHKG-LTGDKVTMVSLLLACTHLGALEVGMWLHPY-------- 51
Y ++ +AL LF + H+ + D+ T+ S+L AC +LG + +G +H Y
Sbjct: 271 YNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAY 330
Query: 52 -----------------------IMKKNIEVD-------------VGLG----------- 64
IM +++E D V +G
Sbjct: 331 NSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGV 390
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
M +DV+ TA+IV G+ ++A++ F M G +P++ T VL C+ +D
Sbjct: 391 MNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLD 448
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 148/401 (36%), Positives = 224/401 (55%), Gaps = 49/401 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHP---------- 50
Y +++ ++AL FR+++ G+ D++T+V + AC LG W+
Sbjct: 216 YSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGYADWIREIAESSRFGSG 275
Query: 51 ------------YIMKKNIE--VDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
Y N+E +V GM +V + +++IV A+ G+ A++ FYEM
Sbjct: 276 SNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFAVHGRARSAIKLFYEM 335
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
G+KP+ +TFVG+ ACSHAG+V++ F M E YG+ P+ +HY C+ +LGRAG
Sbjct: 336 LENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPTADHYACMADLLGRAGH 395
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ KA +L++ MPM + V G LLGA IH N + AE A++ L EL PDN G+Y++LS
Sbjct: 396 LEKALQLVQTMPMEPNGGVWGALLGASHIHGNPDVAEIASRSLFELEPDNLGNYLLLSKT 455
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEV-DGVVHEFVKA---------------- 259
Y+ + KW V R+R+LM E+ ++K PGC +E +G++HEF
Sbjct: 456 YALAAKWDDVSRVRKLMREKQLRKNPGCSWVEAKNGIIHEFFAGDVKHPEINEIKKALDD 515
Query: 260 --------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
G+ P + V +D+D+E K L H+EKLA+ +GL+S G I+I+KNLR+
Sbjct: 516 LLQRLKCTGYQPKLNSVPYDIDDEGKRCLLVSHSEKLALAYGLLSTDAGSTIKIMKNLRI 575
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH SK+ R+ +V D RFHHF NG+CSC +FW
Sbjct: 576 CEDCHIVMCGASKLTGRKIIVRDNMRFHHFLNGACSCNNFW 616
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 91/206 (44%), Gaps = 27/206 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ + A +F E+ H+ D VT L++A G ++ +
Sbjct: 154 YVKFGVLDCARKVFDEMPHR----DVVTWTELIVAYARSGDMDSA-------------CE 196
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+ +G+ +KD++ T+++ + KAL++F +M+ GV D IT VG + AC+ G+
Sbjct: 197 LFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGV 256
Query: 121 VD-----ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFV 175
I+ S ++G ++ L+ + + G + +A + K M ++ F
Sbjct: 257 SGYADWIREIAE----SSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMK-EMNVFS 311
Query: 176 LGGLLGACRIHDNLEAAERAAQQLLE 201
++ +H +A + ++LE
Sbjct: 312 YSSMIVGFAVHGRARSAIKLFYEMLE 337
>gi|346703119|emb|CBX25218.1| hypothetical_protein [Oryza brachyantha]
Length = 596
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/395 (37%), Positives = 225/395 (56%), Gaps = 47/395 (11%)
Query: 5 SACEEALLLF-REVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL 63
SA + L LF R + + +++T+V+++ AC LGAL G+W H Y++K+ + ++ +
Sbjct: 202 SAADAILELFSRMISLGTVRPNEITLVAVIGACGELGALGHGVWAHTYLVKRQLAINRIV 261
Query: 64 GMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV 101
AL +D A++ LA G G AL+ F M+ GV
Sbjct: 262 TTALVEMYAGCGRLDLAEHVFATASDRDTRCYNAMLQGLAAHGHGRAALDLFDRMRGSGV 321
Query: 102 KPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAE 161
D +T + VL +C+HA LVDE + +F+ M ++GI P IEHYGC+V +L RAGR+ AE
Sbjct: 322 PVDGVTILSVLCSCAHAELVDEGLEYFDKMEIEFGIEPRIEHYGCVVDMLSRAGRLDDAE 381
Query: 162 ELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSR 221
+LI MP+ + + L+ AC IH NLE ER +L + PD+ G++V+++N Y+
Sbjct: 382 KLIHEMPIVPNAAIYRSLIRACDIHGNLELGERMITELRQHDPDDSGNHVLIANLYARMN 441
Query: 222 KWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------ 257
+W++ K+ R+ M I K PG L++++GV+HEF+
Sbjct: 442 RWEEAKKTRKEMKSMGIDKSPGSSLLDMNGVLHEFLVGDKTHPASKEIYTMVEEIEARLS 501
Query: 258 KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHT 317
+ G + + VLFD++EE+K L H+E+LAI F L++ PG IRIIKNLRVC DCH
Sbjct: 502 EHGHRSSTTSVLFDVEEEDKADTLTYHSERLAIPFALIASDPGTPIRIIKNLRVCADCHE 561
Query: 318 ATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ ++S+VY RE V+ DR RFHHF+ G CSC DFW
Sbjct: 562 SAKLVSRVYGREIVMRDRTRFHHFREGECSCGDFW 596
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 151/398 (37%), Positives = 215/398 (54%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ + L ++ +G D+VT++++L AC L LE G +H +K +E D
Sbjct: 471 YAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESD 530
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +L +D + A++ G G +A++ F M
Sbjct: 531 TVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLK 590
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V P+ IT V+ ACS AGLV E F +M E + + P +HYGC+V +LGRAGR+
Sbjct: 591 ERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQ 650
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AEE I++MP D V LLGAC+ H+N++ AERAA +LEL P Y+ LSN Y+
Sbjct: 651 EAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYA 710
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ +W ++R +M +R +KK G IE+DG +H FV
Sbjct: 711 QAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTK 770
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+ P+ VL D+D+ +KE AL H+EKLAI +GL+ G IRI+KNLRVC D
Sbjct: 771 EMKEAGYTPDMRFVLHDVDDVQKEKALCHHSEKLAIAYGLLKTPSGTPIRIMKNLRVCGD 830
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTAT ISK+ RE V D NRFH+F NG+CSC DFW
Sbjct: 831 CHTATKFISKIRKREIVARDANRFHYFNNGTCSCGDFW 868
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 123/291 (42%), Gaps = 29/291 (9%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG---- 64
EA+ L ++ +GL + T ++ C E G +H + + +E+D+ LG
Sbjct: 39 EAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLI 98
Query: 65 ------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
M L+DV+T +++I A KA + F M ++P+ I
Sbjct: 99 NFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRI 158
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF+ +L AC++ ++ E+ + + + G+ + L+ + + G I+ A E+
Sbjct: 159 TFLSILKACNNYSIL-EKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHK 217
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLEL-LPDNGGSYVILSNRYSSSRKWKK 225
M + ++ A H L A +Q+L+ + N ++V L N ++ +
Sbjct: 218 MT-ERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNR 276
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFDMDEEE 276
+RI ++ER ++ +I + ++ + K V E+ M + +
Sbjct: 277 GRRIHSHISERGLETD----MIVANALITMYCKCNSVQEAREIFDRMSKRD 323
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 121/308 (39%), Gaps = 68/308 (22%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + +E L ++ +G+ +KVT +S+L ACT GALE G +H + K E+D
Sbjct: 339 YKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELD 398
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L MA K+V+ T+ + + CG + A + F EM
Sbjct: 399 RSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPT 458
Query: 99 R-------------------------------GVKPDAITFVGVLVACSH-AGLVDERIS 126
R G +PD +T + +L AC AGL ++
Sbjct: 459 RNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLV 518
Query: 127 HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIH 186
H + K G+ L+ + + G++A+A + M D +L H
Sbjct: 519 HAEAV--KLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMS-NRDTVAWNAMLAGYGQH 575
Query: 187 -DNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIREL--MAERNIKKPP- 242
D LEA + + L E + N + L+ S+ + V+ RE+ M + + K P
Sbjct: 576 GDGLEAVDLFKRMLKERVSPN---EITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPR 632
Query: 243 ----GCIL 246
GC++
Sbjct: 633 KQHYGCMV 640
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 30/187 (16%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EA L+ ++ G++ + VT VSLL +C AL G +H +I ++ +E D+ + AL
Sbjct: 241 EAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALI 300
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNK-----ALEYFYEMQIRGV 101
+DV++ +A+I A G +K + M+ GV
Sbjct: 301 TMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGV 360
Query: 102 KPDAITFVGVLVACS-HAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA 160
P+ +TF+ +L AC+ H L R H L + + S++ + + + G I +A
Sbjct: 361 FPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQ--TAIFNMYAKCGSIYEA 418
Query: 161 EELIKNM 167
E++ M
Sbjct: 419 EQVFSKM 425
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +A F + + +++T +S+L AC + LE G +H + +E D
Sbjct: 132 YAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETD 191
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL ++V++ TA+I A + N+A E + +M
Sbjct: 192 VAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQ 251
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ P+A+TFV +L +C+ ++ + +SE+ G+ + L+ + + +
Sbjct: 252 AGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISER-GLETDMIVANALITMYCKCNSVQ 310
Query: 159 KAEELIKNMP 168
+A E+ M
Sbjct: 311 EAREIFDRMS 320
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 219/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ EEAL FR + +G+ + + S+ AC + G +E G +H ++ K D
Sbjct: 337 YVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFD 396
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L A+ K+V T ++ A GQG ALE F M+
Sbjct: 397 APLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKA 456
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ P+ IT V VL ACSH+GLV + +FNLM E+YGI P+ EHY C+V + GRAG +
Sbjct: 457 EKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLD 516
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
KA+ I+ ++ + V LL ACR+H ++E A+ A+++L++L + GSYV++SN Y+
Sbjct: 517 KAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQLASEKLVQLEQYDAGSYVLMSNMYA 576
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ KW ++R M ER ++K PG I + VVH FV
Sbjct: 577 TNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFVALDTSHPRSAEIYAYLEKLME 636
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G+ V+ D++EE++ET+L H+EKLAI FG++S G +RI KNLRVC D
Sbjct: 637 RLKEMGYTSRTDLVVHDIEEEQRETSLKFHSEKLAIAFGIISTPVGTALRIFKNLRVCED 696
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A I++ +RE VV D RFHHFK+G CSC+DFW
Sbjct: 697 CHEAIKFITRATDREIVVRDLYRFHHFKDGQCSCEDFW 734
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/399 (38%), Positives = 219/399 (54%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ E+ EA+ LF ++ + G+ D V +V +L A L +L G +H ++++ V+
Sbjct: 541 FAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVE 600
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +L KDV+ TA+I M G G +A+ F M
Sbjct: 601 GAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLE 660
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV PD ++F+ +L ACSH+ LVDE + ++M KY ++P EHY C+V +LGR+G+
Sbjct: 661 TGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTE 720
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + IK+MP+ V LLGACRIH N E A A +LLEL PDN G+YV++SN ++
Sbjct: 721 EAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFA 780
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
KW VK IR M E+ ++K P C IE+ VH F
Sbjct: 781 EMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITE 840
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ +V + S VL D+ EEEK L+ H+E+LAI+FGL+S G +RI KNLRVC
Sbjct: 841 KLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCG 900
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH T ++SK++ RE VV D NRFHHF G+CSC DFW
Sbjct: 901 DCHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 22/138 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ EA+ F E+ G D +VSLL A HLG L G +H Y +K+ ++ D
Sbjct: 340 YVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSD 399
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + M +KD ++ T +I A + ++A+ F Q
Sbjct: 400 LQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQK 459
Query: 99 RGVKPDAITFVGVLVACS 116
G+K D + +L ACS
Sbjct: 460 EGIKVDPMMMGSILEACS 477
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 65/151 (43%), Gaps = 18/151 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EAL LFR +Q G + + T V +L C L L G LH ++K E ++
Sbjct: 248 EALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNI------- 300
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHF 128
AL+V+ A CG + AL F E+ + D I++ +L L E I F
Sbjct: 301 ---QCNALLVMYARCGWVDSALRVFREIGDK----DYISWNSMLSCYVQNRLYAEAIDFF 353
Query: 129 NLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
M + G P + C+V +L G + +
Sbjct: 354 GEMVQN-GFNPD---HACIVSLLSAVGHLGR 380
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 21/135 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------ 54
Y + S EA+ FR Q +G+ D + M S+L AC+ L ++ + +H Y ++
Sbjct: 441 YAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLLDL 500
Query: 55 --KNIEVDV-----GLGMAL--------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
KN +D+ + AL KD++T T+++ A G ++A+ F +M
Sbjct: 501 ILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNA 560
Query: 100 GVKPDAITFVGVLVA 114
G++PD++ VG+L A
Sbjct: 561 GIQPDSVALVGILGA 575
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/398 (38%), Positives = 228/398 (57%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEAL LFR++ +G+ + VT +L+ A + L +L+ G +H I++K +
Sbjct: 187 YAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFF 246
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V L +L D V++ A+++ G G++ + F ++
Sbjct: 247 VALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLH- 305
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ VKPD++T + VL CSH GLVDE + F+ + ++ HYGC++ +LGR+GR+
Sbjct: 306 KEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLE 365
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
KA LI+NMP + G LLGACR+H N+ E AQ+LLE+ P+N G+YVILSN Y+
Sbjct: 366 KALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYA 425
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
++ WK V ++R+LM E+ + K PG I +D V+H F
Sbjct: 426 AAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFV 485
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AGFVP+ S VL D+D+E+KE L H+EKLAITFGL++ PG+ IR++KNLR+C D
Sbjct: 486 DIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVD 545
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH +SKVY RE + D+NRFH +G+C+C D+W
Sbjct: 546 CHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 583
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 64/136 (47%), Gaps = 22/136 (16%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LF ++ G ++ T+ ++L +C+ ++ G +H ++K N E + +G +L
Sbjct: 94 EALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLL 153
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+DV++ TA+I A G +AL+ F ++ G++ + +
Sbjct: 154 DMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHV 213
Query: 107 TFVGVLVACSHAGLVD 122
TF ++ A S +D
Sbjct: 214 TFTTLVTALSGLASLD 229
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 159/401 (39%), Positives = 218/401 (54%), Gaps = 49/401 (12%)
Query: 1 YVEDSACEEALLLFREV--QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK---- 54
Y + AL LF + K + + T+ L+AC L AL G +H Y+++
Sbjct: 586 YAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYG 645
Query: 55 ---------------KNIEVDVGL----GMALKDVMTLTALIVVLAMCGQGNKALEYFYE 95
K+ +VD M ++ ++ T+L+ M G+G AL F E
Sbjct: 646 SVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDE 705
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
M+ + PD ITF+ VL ACSH+G+VD I+ FN MS+ +G+ P EHY C+V + GRAG
Sbjct: 706 MRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAG 765
Query: 156 RIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSN 215
R+ +A +LI MPM V LL ACR+H N+E E AA +LLEL N GSY +LSN
Sbjct: 766 RLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLSN 825
Query: 216 RYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF------------------- 256
Y+++R+WK V RIR M IKK PGC I+ V F
Sbjct: 826 IYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYETLAD 885
Query: 257 ----VKA-GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
+KA G+VP S L D+D+EEK L H+EKLA+ +G+++ P IRI KNLR+
Sbjct: 886 LIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTLHPRAPIRITKNLRI 945
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH+A ISK+ E ++ D +RFHHFKNGSCSCK +W
Sbjct: 946 CGDCHSAITYISKIIEHEIILRDSSRFHHFKNGSCSCKGYW 986
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 106/252 (42%), Gaps = 43/252 (17%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------ 54
Y + EAL +FR++ G + VT+VSLL AC +GAL G H Y +K
Sbjct: 475 YAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLD 534
Query: 55 ------KNIEVDVGL--------------------GMALKDVMTLTALIVVLAMCGQGNK 88
+++V GL +DV+T T +I A G N
Sbjct: 535 GPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANN 594
Query: 89 ALEYFYEM--QIRGVKPDAITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHY- 144
AL+ F M + +KP+ T LVAC+ A L R H ++ YG S+ +
Sbjct: 595 ALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYG---SVMLFV 651
Query: 145 -GCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQL--LE 201
CL+ + ++G + A+ + NMP + L+ +H E A R ++ +
Sbjct: 652 ANCLIDMYSKSGDVDTAQIVFDNMPQR-NAVSWTSLMTGYGMHGRGEDALRVFDEMRKVP 710
Query: 202 LLPDNGGSYVIL 213
L+PD V+L
Sbjct: 711 LVPDGITFLVVL 722
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEA +F+ ++ K D V+ +++ + G LE + L + ++NIE+D
Sbjct: 409 YAKCGKMEEANKVFQRMKFK----DVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELD 464
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
V +T TA+I A GQG +AL+ F +M G +P+ +T V +L AC G
Sbjct: 465 V---------VTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVG 514
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 96/226 (42%), Gaps = 34/226 (15%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMA- 66
+ L+R+++ G T D T + AC +L +L +G LH + + +V + A
Sbjct: 241 RDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAV 300
Query: 67 ------------------------LKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV- 101
++D+++ +++ N AL F++M R +
Sbjct: 301 VSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLM 360
Query: 102 KPDAITFVGVLVACSH--AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
PD I+ V +L AC+ A L ++ F++ S G+ + +V + + G++ +
Sbjct: 361 SPDVISLVNILPACASLAASLRGRQVHGFSIRS---GLVDDVFVGNAVVDMYAKCGKMEE 417
Query: 160 AEELIKNMP---MALDHFVLGGLLGACRIHDNLEAAERAAQQLLEL 202
A ++ + M + + ++ G A R+ L ER ++ +EL
Sbjct: 418 ANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIEL 463
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/398 (38%), Positives = 228/398 (57%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEAL LFR++ +G+ + VT +L+ A + L +L+ G +H I++K +
Sbjct: 219 YAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFF 278
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V L +L D V++ A+++ G G++ + F ++
Sbjct: 279 VALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLH- 337
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ VKPD++T + VL CSH GLVDE + F+ + ++ HYGC++ +LGR+GR+
Sbjct: 338 KEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLE 397
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
KA LI+NMP + G LLGACR+H N+ E AQ+LLE+ P+N G+YVILSN Y+
Sbjct: 398 KALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYA 457
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
++ WK V ++R+LM E+ + K PG I +D V+H F
Sbjct: 458 AAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFV 517
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AGFVP+ S VL D+D+E+KE L H+EKLAITFGL++ PG+ IR++KNLR+C D
Sbjct: 518 DIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVD 577
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH +SKVY RE + D+NRFH +G+C+C D+W
Sbjct: 578 CHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 615
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 64/136 (47%), Gaps = 22/136 (16%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LF ++ G ++ T+ ++L +C+ ++ G +H ++K N E + +G +L
Sbjct: 126 EALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLL 185
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+DV++ TA+I A G +AL+ F ++ G++ + +
Sbjct: 186 DMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHV 245
Query: 107 TFVGVLVACSHAGLVD 122
TF ++ A S +D
Sbjct: 246 TFTTLVTALSGLASLD 261
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 150/391 (38%), Positives = 214/391 (54%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+E L LF++++ G L AC+ LGALE G LH ++ E + +G A+
Sbjct: 407 DEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAM 466
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D+++ ++I L G G KA+E F +M GV PD
Sbjct: 467 ISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDR 526
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
ITF+ VL ACSHAGLV++ +FN M E YGI P +HY +V + RAG + A +I
Sbjct: 527 ITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVID 586
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MP V LL CRIH N++ AA+QL +L+P N G+YV+LSN Y+ +W
Sbjct: 587 SMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWND 646
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
V ++R+LM ++ ++K P C IEV+ VH F+ K G+
Sbjct: 647 VAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGY 706
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
+P+ VL DM+ E+KE AL+ H+EKLA+ FG++ P +R+ KN+R+C DCH A
Sbjct: 707 IPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPDATVRVFKNIRICGDCHNAFKF 766
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+SKV RE +V DR RFHHFKNG CSC+D+W
Sbjct: 767 MSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 113/265 (42%), Gaps = 63/265 (23%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------ 54
YV +EAL L R+++ G+ D +T +++ AC ++G+ ++G +H YI+K
Sbjct: 264 YVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPN 323
Query: 55 ----------------KNIEVD------------------------VGLG---------- 64
KN +VD V G
Sbjct: 324 HSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFE 383
Query: 65 -MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE 123
M +K+++TLT +I LA G G++ L+ F +M++ G +P F G L ACS G ++
Sbjct: 384 EMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALEN 443
Query: 124 -RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGA 182
R H L+ G S+ ++ + + G + AE + MP ++D ++ A
Sbjct: 444 GRQLHAQLV--HLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMP-SVDLVSWNSMIAA 500
Query: 183 CRIHDN-LEAAERAAQQLLE-LLPD 205
H + ++A E Q L E + PD
Sbjct: 501 LGQHGHGVKAIELFDQMLKEGVFPD 525
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 15/114 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + S A LF E+ + D + +L+ A LG LE+G E+
Sbjct: 58 YCKSSNVVYARQLFEEIPNP----DAIARTTLITAYCALGNLELGR-----------EIF 102
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVA 114
G + ++D + A+I A G G+ ALE F M+ +PD TF VL A
Sbjct: 103 NGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSA 156
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 144/391 (36%), Positives = 226/391 (57%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EE L + ++ G DK+T VS+L AC+ L L G +H ++K + + +L
Sbjct: 277 EEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSL 336
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
DV+ +++I G+G +ALE F++M+ ++ +
Sbjct: 337 ISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANE 396
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TF+ +L ACSH+GL ++ +F+LM +KY ++P IEHY C+V +LGRAGR+ +AE +I+
Sbjct: 397 VTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIR 456
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MP+ D + LL AC++H E AER ++++++L P + SYV+LSN ++S+R W
Sbjct: 457 SMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLN 516
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
V +IR+ M +R+++K PG +E+ +VH+F + G+
Sbjct: 517 VSQIRKAMRDRSVRKEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGY 576
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP VL DMD EEKE L H+EK AI F L++ V IR++KNLRVC+DCH A
Sbjct: 577 VPELGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKC 636
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS++ NRE +V D +RFHHFK+G CSC ++W
Sbjct: 637 ISRIRNREIIVRDASRFHHFKDGECSCGNYW 667
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 22/131 (16%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG--- 64
++AL LF+E+ G D+ T+ S+L C L +L G +H ++K E+ +G
Sbjct: 176 KQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSL 235
Query: 65 -------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
M ++ V+ LI A G + L + M++ G +PD
Sbjct: 236 AHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDK 295
Query: 106 ITFVGVLVACS 116
ITFV VL ACS
Sbjct: 296 ITFVSVLSACS 306
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 219/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+++ EE LFR + + + + T +L AC L A ++G +H Y+++ +
Sbjct: 327 YLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSF 386
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
AL D+ + T+L+V A GQ +KAL +F +
Sbjct: 387 SSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLK 446
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G KPD I F+GVL AC+HAGLVD+ + +F+ + EK+G+ +I+HY C++ +L RAG+
Sbjct: 447 SGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFT 506
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE +I MP+ D ++ LLG CRIH NLE A+RAA+ L E+ P+N +YV L+N Y+
Sbjct: 507 EAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYA 566
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S+ + IRE M R I K PG IE+ VH F
Sbjct: 567 SAGMRAEEANIRETMDSRGIVKKPGMSWIEIRREVHVFSVGDNSHPKSKEILEYLSELSK 626
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G+VP+ + VL D++ E+KE L+ H+EKLA+ FG++S G I++ KNLR C D
Sbjct: 627 RMKEVGYVPDTNFVLHDVELEQKEENLSYHSEKLAVAFGIISTPSGTPIKVFKNLRTCVD 686
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A IS + R+ +V D NRFH F+ GSCSCKD+W
Sbjct: 687 CHNAIKFISNITGRKIIVRDSNRFHCFEGGSCSCKDYW 724
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 91/233 (39%), Gaps = 37/233 (15%)
Query: 2 VEDSACEEALLLFREVQ-HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
V+ + EEAL L+R +Q H +K T+ S L A + +L +G +H +IM+ ++ D
Sbjct: 226 VQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSD 285
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +L +DV++ T +I G+ + F +
Sbjct: 286 EVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMN 345
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHY----GCLVYILGRA 154
+ P+ TF GVL AC+ D Y +R + + LV++ +
Sbjct: 346 SNIMPNDFTFAGVLNACADLAAED-----LGKQIHAYMVRVGFDSFSSAASALVHMYSKC 400
Query: 155 GRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNG 207
G I A+ + + +P D F LL H A ELL +G
Sbjct: 401 GDIENAKSVFEILPQP-DLFSWTSLLVGYAQH----GQHDKALHFFELLLKSG 448
>gi|115476560|ref|NP_001061876.1| Os08g0434000 [Oryza sativa Japonica Group]
gi|42407498|dbj|BAD10615.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|42409483|dbj|BAD09839.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623845|dbj|BAF23790.1| Os08g0434000 [Oryza sativa Japonica Group]
Length = 601
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 163/407 (40%), Positives = 217/407 (53%), Gaps = 61/407 (14%)
Query: 1 YVEDSACEEALLLFREVQ--HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
Y + ++AL LF ++ G D VT + LL ACT LGAL+ G + Y
Sbjct: 201 YTRNRRTKDALKLFDAMRGGENGAEPDDVTCILLLQACTSLGALDFGEKVWEY------A 254
Query: 59 VDVGLGMALK----------------------------DVMTLTALIVVLAMCGQGNKAL 90
VD G G LK V+T +A+I LA G G A+
Sbjct: 255 VDHGYGGELKVRNSLITMYTKCGCVDKAYQVFCETPKKSVVTWSAMISGLASNGFGKDAI 314
Query: 91 EYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYI 150
F EM GV PD TF GVL ACSH+GLVDE F++M +Y ++P++ HYGC+V +
Sbjct: 315 SAFEEMGRSGVAPDEQTFTGVLSACSHSGLVDEGFKFFDIMCYEYQLKPNVHHYGCMVDL 374
Query: 151 LGRAGRIAKAEELI-KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGS 209
+GRAG + +A EL+ K+M +A D + LLGACRIH +++ ER L+EL G
Sbjct: 375 MGRAGLLDQAYELVVKDMRVAPDATIWRTLLGACRIHGHIDLGERVINHLIELKAQQAGD 434
Query: 210 YVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA---------- 259
YV+L N Y++ W KV +R+LM E+ I+ PGC +E++G +HEF+ A
Sbjct: 435 YVLLLNTYAAVEDWGKVAEVRKLMKEKGIQTTPGCTTVELNGEIHEFIAADASHPRKAEI 494
Query: 260 --------------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRI 305
G+VPN S L D+D E KE AL H+EKLAI F L+ IR+
Sbjct: 495 YEKLDEINKHLRIAGYVPNVSSELHDLDSEGKECALAYHSEKLAIAFALLVTPQHRPIRL 554
Query: 306 IKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
KNLRVC DCH T + S VY+R +V DR RFHHFK CSC D+W
Sbjct: 555 AKNLRVCVDCHNFTKVFSGVYHRLVIVRDRTRFHHFKEFQCSCNDYW 601
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 218/398 (54%), Gaps = 55/398 (13%)
Query: 5 SAC------EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
SAC EA+ +FR + H+ + + LL +LGA ++G +H +K +
Sbjct: 523 SACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIK--LG 580
Query: 59 VDVGL-----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYE 95
+D GL M +D+ T +I A G G +A+ +
Sbjct: 581 MDSGLVVANALVSMYFKCSSADSLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQL 640
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
M GV P+ +TFVG+L ACSH+GLVDE F MS YG+ P +EHY C+V +LGRAG
Sbjct: 641 MVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAG 700
Query: 156 RIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSN 215
+ AE I +MP+ D + LLGAC+IH N+E RAA++L + P N G+YV+LSN
Sbjct: 701 DVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSN 760
Query: 216 RYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA---------------- 259
YSS W +V ++R+LM ER + K PGC +++ +H FV
Sbjct: 761 IYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWE 820
Query: 260 --------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
G+VP+ VL D+DEE+KE++L H+EKLA+ +GL+ G+ I+I+KNLR+
Sbjct: 821 LYTLLKATGYVPDTDFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRI 880
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCK 349
C DCHT +S V RE V D NRFHHF+NGSCSC+
Sbjct: 881 CGDCHTFIKFVSSVTKREIDVRDGNRFHHFRNGSCSCE 918
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-- 67
A +FR + +G+T ++ +VS+L A HLG + +H + K E DV +G A+
Sbjct: 207 AWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILN 266
Query: 68 ---KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
KDV L + A+++F M R + T+ ++ A S AG +D+
Sbjct: 267 GYTKDVNML-------------DSAVKFFEGMAAR----NEYTWSTIIAALSQAGRIDDA 309
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ + K S+ ++ L R GRI A+ L +
Sbjct: 310 FAVYQRDPLK-----SVPSRTSMLTGLARYGRIDDAKILFDQI 347
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 77/184 (41%), Gaps = 32/184 (17%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + E+AL+ + + KG+ ++ S AC+++ ALE G +H +K + +
Sbjct: 393 YARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFN 452
Query: 61 V--------------GLG--------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G M +KD ++ + + L ++A + F M
Sbjct: 453 SYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMP- 511
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHF-NLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
PD +++ ++ AC+ A +E + F +++ E+ P I L +LG +G +
Sbjct: 512 ---SPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPI-----LTILLGLSGNL 563
Query: 158 AKAE 161
+
Sbjct: 564 GAPQ 567
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/400 (38%), Positives = 223/400 (55%), Gaps = 49/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +AL LF ++Q + VT + ++ AC++LG+ +G LH +++ +++D
Sbjct: 278 YTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDID 337
Query: 61 VGLGMAL------------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM 96
L A+ +DV + LI + G G +ALE F M
Sbjct: 338 TTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRM 397
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
Q+ GV+P+ ITF +L ACSHAGL+DE F M+ K +RP ++HY C+V +LGRAG
Sbjct: 398 QVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMT-KLSVRPEMKHYACMVDMLGRAGF 456
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A LIK +P V G LL ACRIH N E E AA L +L P++ G YV++SN
Sbjct: 457 LNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNI 516
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA----------------- 259
Y++S KWK+V+ +R+ M R +KKP +IE VH F A
Sbjct: 517 YAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESL 576
Query: 260 -------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
G+VP+ S VL D++ E+KE LN H+EKLA+ FG++ G+ I++ KNLRVC
Sbjct: 577 AIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVC 636
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+DCH A IS +Y R+ +V D NRFHHF+ G CSC D+W
Sbjct: 637 SDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 676
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
+AL+LFR++Q +G GD++T +S+ A LG + I + + D M +
Sbjct: 216 KALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMA------ISRARLVFD---RMEER 266
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
+ ++ +++ G+ AL F +MQ P+ +T + ++ ACS+ G
Sbjct: 267 NGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLG 317
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/390 (38%), Positives = 223/390 (57%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EAL LFR++Q G+ + VT+ SL+ AC ++ AL G +H + +++ I DV +G AL
Sbjct: 359 EALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALI 418
Query: 69 D----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
D +++ A++ AM G+ + +E F+ M G KPD +
Sbjct: 419 DMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLV 478
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF VL AC+ GL +E +N MSE++GI P +EHY CLV +L R G++ +A +IK
Sbjct: 479 TFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKE 538
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP D V G LL +CR+H+NL E AA++L L P N G+Y++LSN Y+S W +
Sbjct: 539 MPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEE 598
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVH------------------------EFVKAGFV 262
RIRE+M + ++K PG IEV VH + K+G++
Sbjct: 599 NRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYL 658
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P + VL D++E++KE L H+EKLA+ GL++ PG +++IKNLR+C+DCH +I
Sbjct: 659 PKTNFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVI 718
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S++ RE V D NRFHHFK+G CSC DFW
Sbjct: 719 SRLEGREIYVRDTNRFHHFKDGVCSCGDFW 748
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 85/218 (38%), Gaps = 36/218 (16%)
Query: 11 LLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL--- 67
L F + L D + S + +C L AL+ G LH + D + +L
Sbjct: 89 LTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHM 148
Query: 68 -------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITF 108
+DV+ +A+I + G +A E F EM+ GV+P+ +++
Sbjct: 149 YLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSW 208
Query: 109 VGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI---AKAEELIK 165
G+L + G DE + F +M + G P C++ +G + A+ +
Sbjct: 209 NGMLAGFGNNGFYDEAVGMFRMMLVQ-GFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVI 267
Query: 166 NMPMALDHFVLGGLL---GAC-------RIHDNLEAAE 193
+ D FV+ +L G C R+ D +E E
Sbjct: 268 KQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEME 305
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+EA+ +FR + +G D T+ +L A L + VG +H Y++K+ + D + A+
Sbjct: 222 DEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAM 281
Query: 68 KD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D + +L A + L+ G + ALE F + + + ++ +
Sbjct: 282 LDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNV 341
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
+T+ ++ +CS G E + F M + YG+ P+ L+ G + +E+
Sbjct: 342 VTWTSIIASCSQNGKDLEALELFRDM-QAYGVEPNAVTIPSLIPACGNISALMHGKEI 398
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSH--AGLVDERIS 126
+V+T T++I + G+ +ALE F +MQ GV+P+A+T ++ AC + A + + I
Sbjct: 340 NVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIH 399
Query: 127 HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
F+L + GI + L+ + + GRI A M
Sbjct: 400 CFSL---RRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKM 437
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 153/407 (37%), Positives = 234/407 (57%), Gaps = 64/407 (15%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL---- 63
+ AL LFRE+Q + D TM S+L AC LG+L +G W H ++++K +VDV +
Sbjct: 211 DSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRK-CDVDVAMDVLV 268
Query: 64 ----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEM--QIR 99
GM +D+ + A+I+ A G+ +A+ +F M +
Sbjct: 269 KNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRE 328
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
V+P+++TFVG+L+AC+H G V++ +F++M Y I P++EHYGC+V ++ RAG I +
Sbjct: 329 NVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITE 388
Query: 160 AEELIKNMPMALDHFVLGGLLGAC-RIHDNLEAAERAAQQLLELLPDN-------GGSYV 211
A +++ +MPM D + LL AC + ++E +E A+ ++ DN G+YV
Sbjct: 389 AIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYV 448
Query: 212 ILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------ 259
+LS Y+S+ +W V +R+LM+E I+K PGC IE++G+ HEF
Sbjct: 449 LLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQ 508
Query: 260 ------------GFVPNKSEV-LFD-MDEEEKETALNLHTEKLAITFGLVSPMPGVLIRI 305
G++P++S+ L D ++ KE +L LH+E+LAI FGL++ P IRI
Sbjct: 509 QLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRI 568
Query: 306 IKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
KNLRVCNDCH T +ISKV+N E +V DR RFHHFK+GSCSC D+W
Sbjct: 569 FKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 615
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 150/398 (37%), Positives = 224/398 (56%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y EEAL LF +Q +G + T +LL +C+ +G LE G WLH ++MK + ++
Sbjct: 251 YARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLV 310
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G L DV++ ++++ A G G +A + F EM
Sbjct: 311 GYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIR 370
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++P+ ITF+ VL ACSHA L+DE +F LM KY I P + HY +V +LGRAG +
Sbjct: 371 FGIEPNDITFLSVLTACSHARLLDEGKHYFGLM-RKYNIEPKVSHYATIVDLLGRAGLLD 429
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A+ I+ MP+ + G LLGA ++H N E AAQ++ EL P G++ +L+N Y+
Sbjct: 430 QAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYA 489
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S+ +W+ V ++R++M + +KK P C +EV+ VH FV
Sbjct: 490 SAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQ 549
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G+VP+ S VL +D++EKE L H+EKLA++F L++ PG IRI+KN+RVC D
Sbjct: 550 KIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMKNIRVCGD 609
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A +S V RE +V D NRFHHF +G CSC D+W
Sbjct: 610 CHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +ALLLF + G ++ T+ SL+ C ++ + G +H K +
Sbjct: 150 YAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSN 209
Query: 61 VGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G +L D+ ++ ALI A G+G +AL F MQ
Sbjct: 210 VFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQR 269
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G +P T+ +L +CS G +++ + H +LM + + + L+++ ++G I
Sbjct: 270 EGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGN--TLLHMYAKSGSI 327
Query: 158 AKAEELIKNM 167
AE++ +
Sbjct: 328 RDAEKVFDKL 337
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 213/391 (54%), Gaps = 47/391 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E LL+F E+Q G T S+ A +GALE G W+H +++K + +G +
Sbjct: 124 ETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTI 183
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
KD++T +++ A G G +A+ +F EM+ GV +
Sbjct: 184 LDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQ 243
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
ITF+ +L ACSH GLV E +F++M E + + P I+HY +V +LGRAG + A I
Sbjct: 244 ITFLSILTACSHGGLVKEGKQYFDMMKE-HNLEPEIDHYVTVVDLLGRAGLLNDALVFIF 302
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MPM V G LLG+CR+H N + + AA + EL PD+ G V+L N Y+S+ +W
Sbjct: 303 KMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDA 362
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
R+R++M +KK P C +E++ VH FV KAG+
Sbjct: 363 AARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGY 422
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VPN VL +DE+E++ L H+EK+A+ F L++ G IRI+KN+R+C DCH+A
Sbjct: 423 VPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRY 482
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISKV+ RE VV D NRFHHF +GSCSC D+W
Sbjct: 483 ISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 156/399 (39%), Positives = 219/399 (54%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----K 55
YV++S ++AL LFR V+ + + T+ S+LL C++L AL G +H + MK +
Sbjct: 215 YVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSR 274
Query: 56 NIEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
N+ V L M +DV+ A+I A G G +A+ F M+
Sbjct: 275 NLTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMK 334
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV+P+ ITFV VL AC H GL D I F M E YGI P ++HY C+V +L RAG++
Sbjct: 335 DEGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAGKL 394
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A + I++MP G LL ACR++ NLE AE AA +L+E P + G+YV L+N Y
Sbjct: 395 ERAVDFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIY 454
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF--------------------- 256
+ + +W V R+R M + + K PG IE+ GV+HEF
Sbjct: 455 AVANQWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVLHEFRSNDRLHPQLYLIHEKLGQLA 514
Query: 257 ---VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ G+VP+ VL D+DE K L H+EKLAI FGL+S G+ +RI KNLRVC
Sbjct: 515 ERMKEMGYVPDLDFVLHDVDETMKVQMLMRHSEKLAIAFGLISTAHGMTLRIFKNLRVCG 574
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A +IS + +RE ++ D RFHHF+ G CSC D+W
Sbjct: 575 DCHNAAKVISMIEDREIILRDTTRFHHFRGGHCSCDDYW 613
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 223/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ E AL LF + + +VT S+L AC L ALE+G+ +H K D
Sbjct: 324 YVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQD 383
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL +D ++ A+I +M G G +A++ F M+
Sbjct: 384 VAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKE 443
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
KPD +TFVGVL ACS+ G +DE +F M + YGI P +EHY C+V+++GR+G +
Sbjct: 444 TKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLD 503
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I+++P + LLGAC IH+++E +AQ++LEL P + S+V+LSN Y+
Sbjct: 504 QAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYA 563
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+R+W V +R+ M + +KK PG IE G VH F
Sbjct: 564 RARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLKLINGMLEFLNM 623
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
KAG+ P + VL D++++EKE L LH+E+LA+ FGLV G IRIIKNLR+C D
Sbjct: 624 KTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLALAFGLVRMPAGCPIRIIKNLRICVD 683
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+ +ISK+ R+ +V D NRFHHF+NGSCSC D+W
Sbjct: 684 CHSVIKLISKIVGRDIIVRDMNRFHHFENGSCSCADYW 721
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 25/191 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E+ EAL F +++ G + T +L AC L + G +H ++K N E D
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G+ L DV+ + +I A GQ KALE F +M+
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRR 241
Query: 99 RGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V P+ TF VL A + +D + H + + K G+ + L+ + G I
Sbjct: 242 AFVIPNQFTFSSVLQASADIESLDLSKTIHGHAL--KAGLSTDVFVSNALMACYAKCGCI 299
Query: 158 AKAEELIKNMP 168
++ EL + +
Sbjct: 300 EQSMELFEALS 310
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 22/137 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + EA LF + +G + ++L + E+G +H ++K +
Sbjct: 21 YAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEWAELGRIVHGCVLKVGYGSN 80
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL KD+++ T +I A ++ALE+F +M++
Sbjct: 81 TFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRV 140
Query: 99 RGVKPDAITFVGVLVAC 115
G KP+ TF GVL AC
Sbjct: 141 AGFKPNNFTFAGVLKAC 157
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 59/138 (42%), Gaps = 22/138 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + E+AL +F +++ + ++ T S+L A + +L++ +H + +K + D
Sbjct: 223 FAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTD 282
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL ++ ++ +IV G G +AL F M
Sbjct: 283 VFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLR 342
Query: 99 RGVKPDAITFVGVLVACS 116
V+ +T+ +L AC+
Sbjct: 343 YQVQATEVTYSSILRACA 360
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 149/392 (38%), Positives = 228/392 (58%), Gaps = 48/392 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEAL LF ++Q +G + T +LL + + G+LE G WLH ++MK ++ +G L
Sbjct: 278 EEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTL 337
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR-GVKPD 104
DV++ ++++ A G G +A+E F EM + ++P+
Sbjct: 338 LHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPN 397
Query: 105 AITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
ITF+ VL ACSHAGL+DE + +F LM +KYG+ P + HY +V + GRAG + +A+ I
Sbjct: 398 DITFLSVLTACSHAGLLDEGLYYFELM-KKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFI 456
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWK 224
+ MP+ + + G LLGA ++H N E AAQ++LEL P G++ +LSN Y+S+ +WK
Sbjct: 457 EEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWK 516
Query: 225 KVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAG 260
V ++R+ M + +KK P C +E++ VH F + G
Sbjct: 517 DVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYEMWENLNQKIKEIG 576
Query: 261 FVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATN 320
+VP+ S V +D++EKE L H+EKLA+ F L++ PG +IRI+KN+RVC DCH+A
Sbjct: 577 YVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLNTKPGSVIRIMKNIRVCGDCHSAIK 636
Query: 321 IISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+S V RE +V D NRFHHF++GSCSC+D+W
Sbjct: 637 YVSLVVKREIIVRDTNRFHHFRDGSCSCRDYW 668
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 28/193 (14%)
Query: 1 YVED---SACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI 57
Y +D S+ AL+LF E+ GL ++ + SL+ C LG+ G +H K
Sbjct: 167 YSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGF 226
Query: 58 EVDVGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYE 95
+ +V +G +L D+ ++ ALI A G+G +AL F +
Sbjct: 227 QENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVK 286
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRA 154
MQ G T+ +L + S G +++ + H ++M K G + L+++ ++
Sbjct: 287 MQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMM--KSGKKLVGYVGNTLLHMYAKS 344
Query: 155 GRIAKAEELIKNM 167
G I A+++ +
Sbjct: 345 GNICDAKKVFDRL 357
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 226/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----KN 56
Y E +EAL LF E+ K D++TM+S++ AC+H+GAL W+H Y+ + +
Sbjct: 329 YAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRA 388
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ V+ L M K+V++ +++I AM G + A++ F M+
Sbjct: 389 LSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKE 448
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
++P+ +TF+GVL AC HAGLV+E F+ M ++GI P+ EHYGC+V + RA +
Sbjct: 449 VNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLR 508
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
KA ELI+ MP A + + G L+ AC++H E E AA++LLEL PD+ G+ V+LSN Y+
Sbjct: 509 KAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYA 568
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
++W V IR+ M+ + I K IE++ VH F+ A
Sbjct: 569 KEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKLDEVVS 628
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P+ S +L D++EE+K+ + H+EKLA+ +GL+S IRI+KNLR+C D
Sbjct: 629 KLKLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLISRRNESCIRIVKNLRICED 688
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+ ++SKVY E VV DR RFHH G CSC+D+W
Sbjct: 689 CHSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 726
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 109/265 (41%), Gaps = 56/265 (21%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ ++AL LF +++ + D V + ++L AC H G L G +H ++ +D
Sbjct: 197 YCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAID 256
Query: 61 VGLGMAL----------------------------------------------------- 67
L AL
Sbjct: 257 SHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIE 316
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISH 127
+D++ +A+I A Q +AL+ F EM + PD IT + V+ ACSH G + + +
Sbjct: 317 RDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGAL-AQANW 375
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHD 187
+ ++ G ++ L+ + + G + KA E+ +NMP + ++ A +H
Sbjct: 376 IHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRK-NVISWSSMINAFAMHG 434
Query: 188 NLEAAERAAQQLLEL-LPDNGGSYV 211
N ++A + +++ E+ + NG +++
Sbjct: 435 NADSAIKLFRRMKEVNIEPNGVTFI 459
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 153/390 (39%), Positives = 216/390 (55%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL----- 63
EAL ++++Q + + DKVT +S+L ACT +L G +H ++ ++ DV +
Sbjct: 547 EALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALT 606
Query: 64 -----------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
M ++ ++ ++ A G+ + L+ +M+ GVK + I
Sbjct: 607 NMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGI 666
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFV VL +CSHAGL+ E +F+ + GI EHYGCLV +LGRAG++ +AE+ I
Sbjct: 667 TFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISK 726
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP+ LLGACR+ +L+ + AA +LLEL P N + V+LSN YS WK
Sbjct: 727 MPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNA 786
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEF------------------------VKAGFV 262
++R MA R +KK PG I+V VHEF +AG+V
Sbjct: 787 AKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYV 846
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ VL D+DEE+KE+ L H+EKLAI FGL+S + I KNLRVC DCHTAT I
Sbjct: 847 PDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLHIFKNLRVCEDCHTATKFI 906
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SK+ RE VV D +RFHHF++GSCSCKD+W
Sbjct: 907 SKITGREIVVRDNHRFHHFRDGSCSCKDYW 936
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 134/300 (44%), Gaps = 34/300 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EA +F+ +Q +G D+VT +S+L AC + L+ G + I + + E+D+ +G AL
Sbjct: 244 EAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALI 303
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+++T +A+I A G +AL YF MQ G+ P+ +
Sbjct: 304 TMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRV 363
Query: 107 TFVGVLVA-CSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
TF+ +L + +GL E +S +L+ ++G+ + LV + GR A +
Sbjct: 364 TFISLLNGFTTPSGL--EELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFD 421
Query: 166 N--MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
+P + + G+ C HD+ R QQ + PD IL S
Sbjct: 422 QLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQ-QGIQPDRVNFMTILGACTIGSHG- 479
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFDMDEEEKETALNL 283
+ K + + + E + P L++ +V+ + KAG + +L +MDE++ TA N+
Sbjct: 480 RTRKLVHQCVEESGLGGSP---LVQTS-LVNMYAKAGELDVAEVILQEMDEQQI-TAWNV 534
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 125/298 (41%), Gaps = 35/298 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + C EAL FR +Q +G+ ++VT +SLL T LE +H I + ++
Sbjct: 337 FADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDT 396
Query: 61 VGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL +V ++ ++I + C + + AL+ F MQ
Sbjct: 397 TTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQ 456
Query: 99 RGVKPDAITFVGVLVAC---SHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
+G++PD + F+ +L AC SH ++ H + G P ++ LV + +AG
Sbjct: 457 QGIQPDRVNFMTILGACTIGSHGR--TRKLVHQCVEESGLGGSPLVQ--TSLVNMYAKAG 512
Query: 156 RIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQL-LELLPDNGGSYVILS 214
+ AE +++ M L+ +H A A Q+L LE +P + +++ +
Sbjct: 513 ELDVAEVILQEMDEQ-QITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVL 571
Query: 215 NRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFDM 272
N +SS + K I E + +I + + + + K G + N + M
Sbjct: 572 NACTSSTSLAEGKMIHSNAVECGLDSD----VIVKNALTNMYSKCGSMENARRIFDSM 625
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 23/135 (17%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----N 56
Y + +EAL LF + +G+ + +T+V++L +C L G+ +H +++ N
Sbjct: 33 YSSYKSFQEALALFHAMLLEGVAPNAITLVAVLNSCGSFRELRDGILVHALSLERGFFQN 92
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNK-ALEYFYEMQ 97
V L MA K+V+T A++ V ++ G K A+E F M
Sbjct: 93 TLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRML 152
Query: 98 IRGVKPDAITFVGVL 112
+ GVK + ITF+ VL
Sbjct: 153 LEGVKANVITFLNVL 167
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 28/145 (19%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL------ 63
A+ LF + +G+ + +T +++L + AL G ++H + + +DV +
Sbjct: 144 AVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVN 203
Query: 64 ----------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
GM + V T ++I ++ + +A F MQ G + D +T
Sbjct: 204 TYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVT 263
Query: 108 FVGVLVAC------SHAGLVDERIS 126
F+ +L AC H V E IS
Sbjct: 264 FLSILDACVNPETLQHGKHVRESIS 288
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 153/405 (37%), Positives = 232/405 (57%), Gaps = 54/405 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV- 59
Y E +EAL +F E+ G+ D VTM+S++ AC +LG L+ W+H Y +E
Sbjct: 322 YAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESV 381
Query: 60 ---------------------DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
DV M ++V++ +++I AM G+ + +L F +M+
Sbjct: 382 LPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQ 441
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V+P+ +TFVGVL CSH+GLV+E F M+++Y I P IEHYGC+V + GRA +
Sbjct: 442 ENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLR 501
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E+I++MPMA + + G L+ ACR+H LE E AA+++L+L PD+ G+ V++SN Y+
Sbjct: 502 EALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVLMSNIYA 561
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+W V+ IR +M ++ + K G I+++G HEF+
Sbjct: 562 REYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKRHKQSNEIYTKLYEVVS 621
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMP-------GVLIRIIK 307
AG+VP+ VL D++EEEK+ + H+EKLA+ FGL++ GV IRI+K
Sbjct: 622 KLKLAGYVPDGGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNKEKEEEKGSCGV-IRIVK 680
Query: 308 NLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
NLRVC DCH ++SKVY E +V DR RFH +K+G CSC+D+W
Sbjct: 681 NLRVCEDCHAFFKLVSKVYELEIIVRDRTRFHRYKDGLCSCRDYW 725
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 83/219 (37%), Gaps = 64/219 (29%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+EA LF E++ + D++ + +++ AC G + ++ ++++ ++ +D L AL
Sbjct: 197 DEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTAL 256
Query: 68 -----------------------------------------------------KDVMTLT 74
KD++ T
Sbjct: 257 VTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWT 316
Query: 75 ALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE-----RISHFN 129
+I A +AL F EM G+KPD +T + V+ AC + G +D+ R +H N
Sbjct: 317 TMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLN 376
Query: 130 LMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
G+ + L+ + + G + A ++ + MP
Sbjct: 377 ------GLESVLPIDNALINMYAKCGGLDAARDVFEKMP 409
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 23/180 (12%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----KNIEVDVGL-- 63
+L ++ ++H G D+++ +L A + + AL GM LH + K + V+ GL
Sbjct: 98 TILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFAFKIATLSDPFVETGLMD 157
Query: 64 ----------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
M+ +DV+T +I G ++A + F EM+ V PD +
Sbjct: 158 MYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMI 217
Query: 108 FVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
++ AC G + + ++ + E +R LV + AG + A E + M
Sbjct: 218 LCNIVSACGRTGNMRYNRAIYDFLIEN-DVRMDTHLLTALVTMYAGAGCMDMAMEFFRKM 276
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 154/400 (38%), Positives = 223/400 (55%), Gaps = 49/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +AL LF ++Q + VT + ++ AC++LG+ +G LH +++ +++D
Sbjct: 309 YTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDID 368
Query: 61 VGLGMAL------------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM 96
L A+ +DV + LI + G G +ALE F M
Sbjct: 369 TTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRM 428
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
Q+ GV+P+ ITF +L ACSHAGL+DE F M+ K +RP ++HY C+V +LGRAG
Sbjct: 429 QVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMT-KLSVRPEMKHYACMVDMLGRAGF 487
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A LIK +P V G LL ACRIH N E E AA L +L P++ G YV++SN
Sbjct: 488 LNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNI 547
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA----------------- 259
Y++S KWK+V+ +R+ M R +KKP +IE VH F A
Sbjct: 548 YAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESL 607
Query: 260 -------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
G+VP+ S VL D++ E+KE LN H+EKLA+ FG++ G+ I++ KNLRVC
Sbjct: 608 AIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVC 667
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+DCH A IS +Y R+ +V D NRFHHF+ G CSC D+W
Sbjct: 668 SDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 707
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 22/133 (16%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG---- 64
+AL+LFR++Q +G GD++T +S+ A LG + + +H Y + DV +G
Sbjct: 216 KALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIV 275
Query: 65 ------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
M ++ ++ +++ G+ AL F +MQ P+ +
Sbjct: 276 GMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPV 335
Query: 107 TFVGVLVACSHAG 119
T + ++ ACS+ G
Sbjct: 336 TALIMVSACSYLG 348
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 149/391 (38%), Positives = 221/391 (56%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGLT-GDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+A LF E++H+G++ D + + S++ AC +L E+G +H ++ E + + AL
Sbjct: 221 DAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITLGYESCLFISNAL 280
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
KDV++ T++IV A GQ +AL + EM + GVKP+
Sbjct: 281 IDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNE 340
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TFVG++ ACSHAGLV + + F M E +GI PS++HY CL+ + R+G + +AE LI+
Sbjct: 341 VTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIR 400
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP+ D LL +C+ H N + A R A LL L P++ SY++LSN Y+ + W+
Sbjct: 401 TMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPEDPSSYILLSNIYAGAGMWED 460
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
V ++R+LM KK PG I++ H F K G+
Sbjct: 461 VSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYAGETSHPMRDEIIGLMRELDEEMRKRGY 520
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P+ S VL DMD++EKE L H+E+LA+ +GL+ +PG +IRI+KNLRVC DCHT +
Sbjct: 521 APDTSSVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTVIRIVKNLRVCGDCHTVLKL 580
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS + NRE V D R+HHFK+G+CSC DFW
Sbjct: 581 ISAITNREIYVRDAKRYHHFKDGNCSCNDFW 611
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 221/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGM-------W----LH 49
Y + EAL LF +Q +G+ D + L ACT LGAL++G W +
Sbjct: 295 YASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDN 354
Query: 50 PYIMKKNIEVDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
P + I++ G M KD++ A+I+ L M G A +M+
Sbjct: 355 PVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEK 414
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVK + TF+G+L +C+H GL+ + +F+ M++ Y I P IEHYGC+V +L RAG +
Sbjct: 415 SGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQ 474
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI +MPM + +LG LLG C+IH N E AE QL+ L P N G+YV+LSN YS
Sbjct: 475 EAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYS 534
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
+ +W+ ++R M E+ ++K P C +E +G VHEF
Sbjct: 535 NRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGL 594
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P V+FD+++EEKE L H+EKLAI F L+ PG IR+ KNLRVC+D
Sbjct: 595 EMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSD 654
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA +IS++ +RE +V D NRFH F++GSCSC D+W
Sbjct: 655 CHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 692
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVG--MWLHP-------- 50
Y++ EA+ + R G+ D T V +L AC + L G +W
Sbjct: 194 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQS 253
Query: 51 -YIMKKNIEVDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
++ +++ V G M KD + A++ A G +AL+ F MQ
Sbjct: 254 VFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQA 313
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
GV+PD G L AC+ G +D
Sbjct: 314 EGVRPDCYAVAGALSACTRLGALD 337
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 153/407 (37%), Positives = 234/407 (57%), Gaps = 64/407 (15%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL---- 63
+ AL LFRE+Q + D TM S+L AC LG+L +G W H ++++K +VDV +
Sbjct: 291 DSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRK-CDVDVAMDVLV 348
Query: 64 ----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEM--QIR 99
GM +D+ + A+I+ A G+ +A+ +F M +
Sbjct: 349 KNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRE 408
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
V+P+++TFVG+L+AC+H G V++ +F++M Y I P++EHYGC+V ++ RAG I +
Sbjct: 409 NVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITE 468
Query: 160 AEELIKNMPMALDHFVLGGLLGAC-RIHDNLEAAERAAQQLLELLPDN-------GGSYV 211
A +++ +MPM D + LL AC + ++E +E A+ ++ DN G+YV
Sbjct: 469 AIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYV 528
Query: 212 ILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------ 259
+LS Y+S+ +W V +R+LM+E I+K PGC IE++G+ HEF
Sbjct: 529 LLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQ 588
Query: 260 ------------GFVPNKSEV-LFD-MDEEEKETALNLHTEKLAITFGLVSPMPGVLIRI 305
G++P++S+ L D ++ KE +L LH+E+LAI FGL++ P IRI
Sbjct: 589 QLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRI 648
Query: 306 IKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
KNLRVCNDCH T +ISKV+N E +V DR RFHHFK+GSCSC D+W
Sbjct: 649 FKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 695
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 153/407 (37%), Positives = 234/407 (57%), Gaps = 64/407 (15%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL---- 63
+ AL LFRE+Q + D TM S+L AC LG+L +G W H ++++K +VDV +
Sbjct: 234 DSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRK-CDVDVAMDVLV 291
Query: 64 ----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEM--QIR 99
GM +D+ + A+I+ A G+ +A+ +F M +
Sbjct: 292 KNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRE 351
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
V+P+++TFVG+L+AC+H G V++ +F++M Y I P++EHYGC+V ++ RAG I +
Sbjct: 352 NVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITE 411
Query: 160 AEELIKNMPMALDHFVLGGLLGAC-RIHDNLEAAERAAQQLLELLPDN-------GGSYV 211
A +++ +MPM D + LL AC + ++E +E A+ ++ DN G+YV
Sbjct: 412 AIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYV 471
Query: 212 ILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------ 259
+LS Y+S+ +W V +R+LM+E I+K PGC IE++G+ HEF
Sbjct: 472 LLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQ 531
Query: 260 ------------GFVPNKSEV-LFD-MDEEEKETALNLHTEKLAITFGLVSPMPGVLIRI 305
G++P++S+ L D ++ KE +L LH+E+LAI FGL++ P IRI
Sbjct: 532 QLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRI 591
Query: 306 IKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
KNLRVCNDCH T +ISKV+N E +V DR RFHHFK+GSCSC D+W
Sbjct: 592 FKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 153/407 (37%), Positives = 234/407 (57%), Gaps = 64/407 (15%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL---- 63
+ AL LFRE+Q + D TM S+L AC LG+L +G W H ++++K +VDV +
Sbjct: 225 DSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRK-CDVDVAMDVLV 282
Query: 64 ----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEM--QIR 99
GM +D+ + A+I+ A G+ +A+ +F M +
Sbjct: 283 KNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRE 342
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
V+P+++TFVG+L+AC+H G V++ +F++M Y I P++EHYGC+V ++ RAG I +
Sbjct: 343 NVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITE 402
Query: 160 AEELIKNMPMALDHFVLGGLLGAC-RIHDNLEAAERAAQQLLELLPDN-------GGSYV 211
A +++ +MPM D + LL AC + ++E +E A+ ++ DN G+YV
Sbjct: 403 AIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYV 462
Query: 212 ILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------ 259
+LS Y+S+ +W V +R+LM+E I+K PGC IE++G+ HEF
Sbjct: 463 LLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQ 522
Query: 260 ------------GFVPNKSEV-LFD-MDEEEKETALNLHTEKLAITFGLVSPMPGVLIRI 305
G++P++S+ L D ++ KE +L LH+E+LAI FGL++ P IRI
Sbjct: 523 QLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRI 582
Query: 306 IKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
KNLRVCNDCH T +ISKV+N E +V DR RFHHFK+GSCSC D+W
Sbjct: 583 FKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 629
>gi|15232821|ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g47530
gi|6522536|emb|CAB61979.1| putative protein [Arabidopsis thaliana]
gi|62320272|dbj|BAD94558.1| hypothetical protein [Arabidopsis thaliana]
gi|332644772|gb|AEE78293.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 160/403 (39%), Positives = 224/403 (55%), Gaps = 51/403 (12%)
Query: 1 YVEDSACEEALLLFREVQHK---GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI 57
Y+ + + L+LF ++++ + D VT + L AC +LGAL+ G +H +I + +
Sbjct: 189 YLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGL 248
Query: 58 EVDVGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYE 95
+ L GM ++V++ TALI LAM G G +A+E F E
Sbjct: 249 SGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNE 308
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLM-SEKYGIRPSIEHYGCLVYILGRA 154
M G+ P+ T G+L ACSH+GLV E + F+ M S ++ I+P++ HYGC+V +LGRA
Sbjct: 309 MLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRA 368
Query: 155 GRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILS 214
+ KA LIK+M M D + LLGACR+H ++E ER L+EL + G YV+L
Sbjct: 369 RLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLL 428
Query: 215 NRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK---------------- 258
N YS+ KW+KV +R LM E+ I PGC IE+ G VHEF+
Sbjct: 429 NTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLA 488
Query: 259 --------AGFVPNKSEVLFDMD-EEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNL 309
AG+V + L +++ EEEK AL H+EKLAI FG++ PG IR+ KNL
Sbjct: 489 EINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNL 548
Query: 310 RVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
R C DCH +S VY+R +V DR+RFHHFK GSCSC DFW
Sbjct: 549 RTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 147/394 (37%), Positives = 217/394 (55%), Gaps = 47/394 (11%)
Query: 5 SACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG 64
S E+AL LF+ + G + SL AC+ G LE G W+H Y++K ++ G
Sbjct: 241 SGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG 300
Query: 65 ----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVK 102
+A +DV++ +L+ A G G +A+ +F EM+ G++
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIR 360
Query: 103 PDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE 162
P+ I+F+ VL ACSH+GL+DE ++ LM +K GI P HY +V +LGRAG + +A
Sbjct: 361 PNEISFLSVLTACSHSGLLDEGWHYYELM-KKDGIVPEAWHYVTVVDLLGRAGDLNRALR 419
Query: 163 LIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRK 222
I+ MP+ + LL ACR+H N E AA+ + EL PD+ G +VIL N Y+S +
Sbjct: 420 FIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGR 479
Query: 223 WKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------K 258
W R+R+ M E +KK P C +E++ +H FV +
Sbjct: 480 WNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKE 539
Query: 259 AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTA 318
G+VP+ S V+ +D++E+E L H+EK+A+ F L++ PG I I KN+RVC DCHTA
Sbjct: 540 LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTA 599
Query: 319 TNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ SKV RE +V D NRFHHFK+G+CSCKD+W
Sbjct: 600 IKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EA+ F E++ G+ ++++ +S+L AC+H G L+ G W + +MKK+
Sbjct: 338 YAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG-WHYYELMKKD---- 392
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC 115
G+ + + ++ +L G N+AL + EM I +P A + +L AC
Sbjct: 393 -GI---VPEAWHYVTVVDLLGRAGDLNRALRFIEEMPI---EPTAAIWKALLNAC 440
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 23/142 (16%)
Query: 4 DSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL 63
D C+ ALL F ++ G + ++ T+ S++ A G LH + +K + +V +
Sbjct: 140 DRPCD-ALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 198
Query: 64 GMALKDVMT----------------------LTALIVVLAMCGQGNKALEYFYEMQIRGV 101
G AL D+ T ALI A KALE F M G
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258
Query: 102 KPDAITFVGVLVACSHAGLVDE 123
+P ++ + ACS G +++
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQ 280
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 221/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGM-------W----LH 49
Y + EAL LF +Q +G+ D + L ACT LGAL++G W +
Sbjct: 248 YASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDN 307
Query: 50 PYIMKKNIEVDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
P + I++ G M KD++ A+I+ L M G A +M+
Sbjct: 308 PVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEK 367
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVK + TF+G+L +C+H GL+ + +F+ M++ Y I P IEHYGC+V +L RAG +
Sbjct: 368 SGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQ 427
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI +MPM + +LG LLG C+IH N E AE QL+ L P N G+YV+LSN YS
Sbjct: 428 EAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYS 487
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
+ +W+ ++R M E+ ++K P C +E +G VHEF
Sbjct: 488 NRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGL 547
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P V+FD+++EEKE L H+EKLAI F L+ PG IR+ KNLRVC+D
Sbjct: 548 EMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSD 607
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA +IS++ +RE +V D NRFH F++GSCSC D+W
Sbjct: 608 CHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 645
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVG--MWLHP-------- 50
Y++ EA+ + R G+ D T V +L AC + L G +W
Sbjct: 147 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQS 206
Query: 51 -YIMKKNIEVDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
++ +++ V G M KD + A++ A G +AL+ F MQ
Sbjct: 207 VFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQA 266
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
GV+PD G L AC+ G +D
Sbjct: 267 EGVRPDCYAVAGALSACTRLGALD 290
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 214/391 (54%), Gaps = 47/391 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV-----DVG 62
E L+ F E+Q G T S+ A +GALE G W+H +++K ++ +
Sbjct: 246 ETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTI 305
Query: 63 LGMALK-----------------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
LGM K D++T ++ A G G +A+ +F E++ G++ +
Sbjct: 306 LGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQ 365
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
ITF+ VL ACSH GLV E +F++M + Y + P I+HY V +LGRAG + +A +
Sbjct: 366 ITFLSVLTACSHGGLVKEGKQYFDMMKD-YNVEPEIDHYVSFVDLLGRAGLLKEALIFVF 424
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MPM V G LLGACR+H N + + AA + EL P++ G V+L N Y+S+ +W
Sbjct: 425 KMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQWDD 484
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
R+R++M +KK P C +E++ VH FV KAG+
Sbjct: 485 AARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRIKKAGY 544
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VPN VL + E+E+ET L H+EK+A+ F L++ G IRI+KN+R+C DCH+A
Sbjct: 545 VPNTDYVLLHIKEQERETKLQYHSEKIALAFALINMPAGATIRIMKNIRICGDCHSAFRY 604
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+S+V+ RE VV D NRFHHF NGSCSC D+W
Sbjct: 605 VSEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 54/145 (37%), Gaps = 22/145 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL L ++ T S L A G +G +H +K N++ D
Sbjct: 138 YAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDED 197
Query: 61 VGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL D+ ++ ALI A G G L F EMQ
Sbjct: 198 VYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQR 257
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE 123
G T+ V A + G +++
Sbjct: 258 NGFGATHFTYSSVFSALARIGALEQ 282
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 151/397 (38%), Positives = 224/397 (56%), Gaps = 47/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
++ E+A+ LF +Q + + D T+VS++ A + W+H Y ++ +++ DV
Sbjct: 339 AQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDV 398
Query: 62 GLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ AL D V+T A+I G G A+E F EM+
Sbjct: 399 YVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSI 458
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G+ P+ TF+ VL ACSHAGLVDE +F M E YG+ P +EHYG +V +LGRAG++ +
Sbjct: 459 GIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDE 518
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A I+ MPM V G +LGAC++H N+E AE +AQ++ EL P G +V+L+N Y++
Sbjct: 519 AWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYAN 578
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF----------------------- 256
+ WK V R+R M + ++K PG +I++ +H F
Sbjct: 579 ASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEE 638
Query: 257 VKA-GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+KA G+VP+ ++ + D++++ K LN H+EKLAI FGL+ PG I+I KNLRVCNDC
Sbjct: 639 IKAVGYVPD-TDSIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDC 697
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H AT +IS V RE ++ D RFHHFK+G CSC D+W
Sbjct: 698 HNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 22/136 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL LF + +G+ V++++ L AC LG L+ GM +H +++ ++ +
Sbjct: 237 YAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSN 296
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL + ++ A+I+ A G A+ F MQ+
Sbjct: 297 VSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQL 356
Query: 99 RGVKPDAITFVGVLVA 114
VKPD+ T V V+ A
Sbjct: 357 ENVKPDSFTLVSVIPA 372
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 150/401 (37%), Positives = 227/401 (56%), Gaps = 49/401 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI--- 57
+ +++ EA++ F ++Q G+ D++T++ ++ AC LGA + W+ K
Sbjct: 254 FAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGK 313
Query: 58 -EVDVG--------------------LGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
V VG GM ++V + +++I+ AM G+ + A++ F EM
Sbjct: 314 HSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEM 373
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+KP+ +TF+GVL ACSHAG+V++ F LM + YGI+PS +HY C+V +LGRAGR
Sbjct: 374 VKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGR 433
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A EL+K MP+ V G LLGACRIH + + A AA L EL P G+Y++L+N
Sbjct: 434 LQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDIAAIAANHLFELEPYCIGNYILLANI 493
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVD-GVVHEFVKA---------------- 259
Y+S +W V +R+LM R ++K P IE + G+VHEF
Sbjct: 494 YASCGRWNDVSTVRKLMRTRGLRKNPAFSWIESEKGMVHEFFSGDMTHPRSGEIKQALED 553
Query: 260 --------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
G+ P+ S V +D+++E+K L H+EKLA+ FGL+S +PG IRI+KNLR+
Sbjct: 554 LLDRLEAKGYQPHLSSVSYDVNDEDKRRILMTHSEKLALAFGLISTIPGSKIRIVKNLRI 613
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH+ S++ RE +V D RFHHF +G CSC +FW
Sbjct: 614 CEDCHSVICGASQITGREIIVRDIMRFHHFHDGICSCGNFW 654
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 10/148 (6%)
Query: 51 YIMKKNIEVDVGL--GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITF 108
Y+ N+E L G+ +KD++ T ++ A + +A+ +F +MQ GV+ D IT
Sbjct: 223 YVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITL 282
Query: 109 VGVLVACSHAGLVD--ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
+GV+ AC+ G + I SE +G + S+ L+ + + G + A + +
Sbjct: 283 IGVISACAQLGAAKYADWIRDVAEKSE-FGGKHSVVVGSALIDMYSKCGSVGDAYRVFQG 341
Query: 167 MP----MALDHFVLGGLLGACRIHDNLE 190
M + +LG + R+HD ++
Sbjct: 342 MKERNVYSYSSMILGFAMHG-RVHDAMK 368
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 280 bits (716), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 152/399 (38%), Positives = 224/399 (56%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQ-HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
++ + EAL LF ++Q + D+VTM+S++ A +HLG LE+G W+ +I + V
Sbjct: 160 FLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGFGV 219
Query: 60 DVGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
V LG MA+++V+T TALI L + G+ +AL F+ M+
Sbjct: 220 SVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGIHGRSMEALAMFHSMR 279
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV+PD +TF GVLVACSH GLV E F + + YG+ P ++HYGC+V ILGRAG +
Sbjct: 280 KSGVQPDYVTFSGVLVACSHGGLVKEGWDIFESIRKVYGMDPLLDHYGCMVDILGRAGLL 339
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A + ++ MPM + + LLGAC H+NL AE+ ++ ++ G V+LSN Y
Sbjct: 340 NEAYDFVERMPMKPNSIIWRTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVY 399
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
++ +W + IR M E+ I K PGC I VD +HEFV
Sbjct: 400 GAAGRWVEKASIRSKMREKRIGKEPGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSII 459
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G++ VL D++EEE+E +L+ H+EKLA+ F ++S IRI+KNLR+C
Sbjct: 460 GDLRNRGYMMQTKNVLHDIEEEEREHSLSYHSEKLAVAFAILSMKDKRTIRIMKNLRICY 519
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+ IS + R+ ++ DRNRFHHF+ G CSC D+W
Sbjct: 520 DCHSFMKHISVRFERKIIIRDRNRFHHFEKGLCSCHDYW 558
Score = 40.8 bits (94), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 16/130 (12%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKD 69
+L F ++ G+ D T +L AC+ L ++ + LH I+K GLG D
Sbjct: 71 SLSYFFSMRSNGIPLDNFTFPFVLKACSRL---QINLHLHSLIVK------YGLG---SD 118
Query: 70 VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFN 129
+ ALI V CG A++ F EM R D++++ V+ + + G E + F
Sbjct: 119 IFVQNALICVYGYCGSLEMAVKVFDEMSER----DSVSWSTVIASFLNNGYASEALDLFE 174
Query: 130 LMSEKYGIRP 139
M + + P
Sbjct: 175 KMQLEDKVVP 184
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 280 bits (716), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 159/392 (40%), Positives = 215/392 (54%), Gaps = 48/392 (12%)
Query: 9 EALLLFREVQHKGL--TGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL--- 63
+AL LF +Q DKVT + LL AC L ALE G +H YI + + L
Sbjct: 211 DALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNS 270
Query: 64 -------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
M K+V++ +A+I L+M G G +A+E F+EMQ GV+P
Sbjct: 271 LISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPG 330
Query: 105 AITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
TF VL ACSH GLVDE ++ F+ M +++ I P++ HYGC+V +LGRAG + +A ELI
Sbjct: 331 DHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELI 390
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWK 224
+M + D + LLGACRIH + ER + L+EL G YV+L N YSS+ W
Sbjct: 391 MSMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWD 450
Query: 225 KVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------------AG 260
KV +R+LM E+ I P C IE++GVVH+F AG
Sbjct: 451 KVTELRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAG 510
Query: 261 FVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATN 320
+ S L ++ ++K AL+ H+EKLAI FG+++ PG IRI N+R C DCH
Sbjct: 511 YEAEMSSELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAK 570
Query: 321 IISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS VYNR+ VV DR+RFHHF+ G CSC DFW
Sbjct: 571 YISSVYNRKVVVRDRSRFHHFQEGRCSCNDFW 602
>gi|218186365|gb|EEC68792.1| hypothetical protein OsI_37341 [Oryza sativa Indica Group]
Length = 960
Score = 280 bits (716), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 222/394 (56%), Gaps = 46/394 (11%)
Query: 5 SACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG 64
SA + L LF + + +++T+V+++ AC LGA+ G+W H Y +K+ + V+ +
Sbjct: 567 SAADAILELFVRMLSLAIEPNEITLVAVIGACGELGAVSHGVWAHTYAVKRRLAVNCIVA 626
Query: 65 MAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVK 102
AL +D A++ LA+ G G AL M GV
Sbjct: 627 TALVEMYAGCGRLDLAEQVFAAVSDRDTRCYNAMLHGLAVHGHGRAALSLLDRMHGAGVP 686
Query: 103 PDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE 162
D +T + V+ AC+HAGLVDE + +F+ M ++GI P IEHYGC++ +L RAG++ AE+
Sbjct: 687 VDGVTVLSVMCACAHAGLVDEGLDYFDRMEIEFGIEPRIEHYGCMIDMLSRAGQLNNAEK 746
Query: 163 LIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRK 222
LI M + + + L+ AC IH LE E+ +L+ L PD+ G++V++SN Y+ + +
Sbjct: 747 LIHEMLIVPNAAIYRSLIRACGIHGKLELGEKMIAELMRLEPDDSGNHVLISNFYARTNR 806
Query: 223 WKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF------------------------VK 258
W+ K+ R+ M I K PG L++++GV+HEF ++
Sbjct: 807 WEDAKKARKEMKSMGIDKNPGSSLVDINGVLHEFLVGDKTHPASKEIYTMVEEIETRLIE 866
Query: 259 AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTA 318
G + S LFD++EE+K L+ H+E+LAI F L++ PG IRIIKNLRVC DCH +
Sbjct: 867 CGRRSSTSSALFDVEEEDKADTLSYHSERLAIAFALIASNPGAPIRIIKNLRVCADCHES 926
Query: 319 TNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
++S+VY RE V+ DR RFHHF++G CSC DFW
Sbjct: 927 AKLVSRVYGREIVMRDRTRFHHFRDGVCSCGDFW 960
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 280 bits (716), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 151/397 (38%), Positives = 224/397 (56%), Gaps = 47/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
++ E+A+ LF +Q + + D T+VS++ A + W+H Y ++ +++ DV
Sbjct: 339 AQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDV 398
Query: 62 GLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ AL D V+T A+I G G A+E F EM+
Sbjct: 399 YVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSI 458
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G+ P+ TF+ VL ACSHAGLVDE +F M E YG+ P +EHYG +V +LGRAG++ +
Sbjct: 459 GIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDE 518
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A I+ MPM V G +LGAC++H N+E AE +AQ++ EL P G +V+L+N Y++
Sbjct: 519 AWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYAN 578
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF----------------------- 256
+ WK V R+R M + ++K PG +I++ +H F
Sbjct: 579 ASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEE 638
Query: 257 VKA-GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+KA G+VP+ ++ + D++++ K LN H+EKLAI FGL+ PG I+I KNLRVCNDC
Sbjct: 639 IKAVGYVPD-TDSIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDC 697
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H AT +IS V RE ++ D RFHHFK+G CSC D+W
Sbjct: 698 HNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 22/136 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL LF + +G+ V++++ L AC LG L+ GM +H +++ ++ +
Sbjct: 237 YAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSN 296
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL + ++ A+I+ A G A+ F MQ+
Sbjct: 297 VSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQL 356
Query: 99 RGVKPDAITFVGVLVA 114
VKPD+ T V V+ A
Sbjct: 357 ENVKPDSFTLVSVIPA 372
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 280 bits (716), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 153/381 (40%), Positives = 214/381 (56%), Gaps = 46/381 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ +AL LF +++ G+ D T+VSLL AC LGAL G LH I ++ +E D
Sbjct: 343 YIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLGALPQGRALHASIEQRIVEED 402
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V L AL +DV T +A+I LA G G ALE F +M+
Sbjct: 403 VYLVTALVDMYMKCGRVDEATAVFHRMGERDVHTWSAMIAGLAFNGMGMDALESFCQMKR 462
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G +P ++T++ VL ACSH+ L++E HFN M + + P IEHYGC++ +L R+G +
Sbjct: 463 DGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRSLHKLHPQIEHYGCMIDLLARSGLLD 522
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A L++ MPM + + +L ACR+H N++ A AA+ LL+L P+ YV L N Y
Sbjct: 523 EAMHLVQTMPMQPNAVIWASILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYI 582
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
SR+W + KRIR LM E+ +KK G I V G VH+FV
Sbjct: 583 DSRQWVEAKRIRMLMEEQGVKKTAGYSSITVAGQVHKFVVNDQSHPWTLEIITMMEEIAR 642
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+ P S + D+DEEEKE AL H+EK+AI FGL+S P + I I+KNLRVC D
Sbjct: 643 RLKSAGYSPATSRIAVDVDEEEKEQALLAHSEKIAIAFGLISLPPNLPIHIMKNLRVCED 702
Query: 315 CHTATNIISKVYNRETVVMDR 335
CH+A +IS+++NRE +V DR
Sbjct: 703 CHSAIKLISQLWNREIIVRDR 723
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 82/214 (38%), Gaps = 57/214 (26%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD-------- 60
+A+ F + G+ D+V ++ L AC+ L LE G LH + KK I++
Sbjct: 218 DAVYCFNCMLSDGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLI 277
Query: 61 ------------------VGLG----------------------------MALKDVMTLT 74
VG G M +DV+T
Sbjct: 278 DMYAKCGDIAQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFN 337
Query: 75 ALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSE 133
++I G+ AL+ F +++ G++ D T V +L AC+ G + + R H ++ E
Sbjct: 338 SMITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLGALPQGRALHASI--E 395
Query: 134 KYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ + + LV + + GR+ +A + M
Sbjct: 396 QRIVEEDVYLVTALVDMYMKCGRVDEATAVFHRM 429
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 280 bits (715), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 150/387 (38%), Positives = 219/387 (56%), Gaps = 49/387 (12%)
Query: 15 REVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVG-LGMALKDVMT- 72
+E+ GL D +VS+L A LG +E G WLH Y+ IE+ G +G AL D+ +
Sbjct: 218 KEMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSK 277
Query: 73 ----------------------LTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVG 110
++I LA+ G +AL+ F EM+ ++P+ ITF+G
Sbjct: 278 CGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLG 337
Query: 111 VLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMA 170
+L CSH GLV+E +F M EKY I P I+HYGC++ + GRAGR+ A +I+NMP
Sbjct: 338 LLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFE 397
Query: 171 LDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIR 230
D +L A H ++E + AA + +EL PD+ SYV+LSN Y+ + +W V +IR
Sbjct: 398 ADLLAWKAILSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIR 457
Query: 231 ELMAERNIKKPPGCILIEVDGVVHEFVKA-------------------------GFVPNK 265
+M +R +KK GC + V+G VHEF+ G+ P+
Sbjct: 458 LMMRQRGVKKIAGCSSMLVNGKVHEFLLGKELDSSYSGQVLAKIAEVVSRLKLQGYEPDL 517
Query: 266 SEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKV 325
++VL D+++E KE+ LNLH+EK+AI FGL+ I I+KNLRVC DCH ++SKV
Sbjct: 518 TQVLLDIEDEGKESLLNLHSEKMAIAFGLIHINKSAPIHIVKNLRVCCDCHCFMKLVSKV 577
Query: 326 YNRETVVMDRNRFHHFKNGSCSCKDFW 352
YNR+ ++ D+NRFHHF+NG CSC ++W
Sbjct: 578 YNRQIIMRDQNRFHHFENGCCSCNEYW 604
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 280 bits (715), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 149/402 (37%), Positives = 225/402 (55%), Gaps = 50/402 (12%)
Query: 1 YVEDSACEEALLLFREVQHK--GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK---- 54
Y + +AL LF E+ K + + T+ +L+AC HL +L +G +H Y+ +
Sbjct: 485 YAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEY 544
Query: 55 ----------------KNIEVDVGL----GMALKDVMTLTALIVVLAMCGQGNKALEYFY 94
K +VD M ++ ++ T+++ M G+G +AL+ F
Sbjct: 545 ESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFD 604
Query: 95 EMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRA 154
+MQ G PD I+F+ +L ACSH+G+VD+ + +F++M YG+ S +HY C++ +L R+
Sbjct: 605 KMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARS 664
Query: 155 GRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILS 214
GR+ KA + I+ MPM + LL ACR+H N+E AE A +L+ + +N GSY ++S
Sbjct: 665 GRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLIS 724
Query: 215 NRYSSSRKWKKVKRIRELMAERNIKKPPGCILIE-VDGVVHEFVK--------------- 258
N Y+++R+WK V RIR+LM + IKK PGC ++ G FV
Sbjct: 725 NIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLE 784
Query: 259 --------AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLR 310
G+VP + L D+D+EEK L H+EKLA+ +GL++ PG IRI KNLR
Sbjct: 785 RLIGRIKVMGYVPETNFALHDVDDEEKNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLR 844
Query: 311 VCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
VC DCH+A ISK+ + E +V D +RFHHFKNGSCSC +W
Sbjct: 845 VCGDCHSAFIYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 39/207 (18%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y + +EAL F+++ G + VT++SLL AC LGAL GM H Y +KK
Sbjct: 370 YAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSL 429
Query: 56 ----------------NIEVDV---------------GLGMALKDVMTLTALIVVLAMCG 84
N +D+ + ++V+T T +I A G
Sbjct: 430 DNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYG 489
Query: 85 QGNKALEYFYEM--QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIE 142
N AL+ F EM + V P+A T +L+AC+H + ++ + S+
Sbjct: 490 DSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVY 549
Query: 143 HYG-CLVYILGRAGRIAKAEELIKNMP 168
CL+ + + G + A + +MP
Sbjct: 550 FVANCLIDMYSKCGDVDTARNVFDSMP 576
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 62/123 (50%), Gaps = 13/123 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + ++A+ +F ++ K D V+ +++ T G L + K+NI +D
Sbjct: 304 YAKCGSMKDAVNVFNVMEFK----DVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLD 359
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
V +T +A+I A G G +AL+ F +M + G +P+++T + +L AC+ G
Sbjct: 360 V---------ITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGA 410
Query: 121 VDE 123
+ +
Sbjct: 411 LSQ 413
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 29/168 (17%)
Query: 1 YVEDSACEEALLLFRE---VQHKGLT---GDKVTMVSLLLACTHLGALEVGMWLHPYIMK 54
+V+ S AL LF E + H+ T D +++V++L AC L AL +H Y ++
Sbjct: 228 HVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIR 287
Query: 55 KNIEVDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEY 92
D + AL KDV++ A++ G+ A E
Sbjct: 288 NGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFEL 347
Query: 93 FYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPS 140
F M+ + D IT+ V+ + G E + F M YG P+
Sbjct: 348 FKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMI-LYGSEPN 394
>gi|357141490|ref|XP_003572243.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Brachypodium distachyon]
Length = 884
Score = 280 bits (715), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 156/401 (38%), Positives = 220/401 (54%), Gaps = 49/401 (12%)
Query: 1 YVEDSACEEALLLFREVQH--KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
Y + ++ L LF E++ + D+VT + LL ACT LGAL+ G + Y ++
Sbjct: 484 YARNKRTKDTLWLFDEMRRGESEVKPDEVTCILLLQACTSLGALDFGEQIWEYAVEHGYG 543
Query: 59 VDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM 96
++ + ++ K V+T +A+I+ LA G G A+ F EM
Sbjct: 544 CELKVRNSVITMYTRCGCVEKAYQVFCHTPQKSVVTWSAMIMGLAANGFGEDAISAFEEM 603
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
GV PD TF GVL ACSH+GLVDE F++M +Y + P++ HYGC+V ++GRAG
Sbjct: 604 SRSGVVPDGQTFTGVLSACSHSGLVDEGFRFFDMMRYEYKMMPNVRHYGCIVDLMGRAGL 663
Query: 157 IAKAEELI-KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSN 215
+ +A EL+ K M +A D + LLGACRIH +++ E+ L+EL G YV+L N
Sbjct: 664 LDEAYELVVKEMKVAPDATIWRTLLGACRIHGHVDLGEKVISHLIELKAQQAGDYVLLLN 723
Query: 216 RYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK----------------- 258
Y+++ W+KV +R+LM E I+ PGC +E++G +HEF+
Sbjct: 724 TYAAAGDWEKVAEVRKLMRENEIQTTPGCTTVELNGELHEFIADDASHPRKAEIYGKLDE 783
Query: 259 -------AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
AG+VP+ S L D+D E KE AL H+EKLAI F L+ IR+ KNLRV
Sbjct: 784 INRHLRIAGYVPHVSSDLHDLDSEGKECALTYHSEKLAIAFALLVMPQRRPIRLAKNLRV 843
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH T + S VYNR +V DR RFHHF G CSC D+W
Sbjct: 844 CVDCHNFTKVFSGVYNRLVIVRDRTRFHHFNGGQCSCNDYW 884
>gi|357467379|ref|XP_003603974.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493022|gb|AES74225.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 566
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/392 (39%), Positives = 220/392 (56%), Gaps = 48/392 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EA+ LF+ + G+ ++ T++S+L C GAL VG +H + +K I+ + AL
Sbjct: 175 EAIQLFQRMLEVGVDVNEATVISVLRGCADSGALSVGRKVHGIVKEKGIDFKANVCTALI 234
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+DV TA+I LA G +A+E F EM+ VKPD
Sbjct: 235 HMYSKCGCLESAREVFDDVLDRDVFVWTAMIYGLACHGMCKEAIELFLEMETCNVKPDER 294
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
T + VL A +AGLV E FN + ++Y ++P+I+H+GC+V +L + G + +AE+ I
Sbjct: 295 TIMVVLSAYRNAGLVREGYMFFNDVQKRYSMKPNIKHFGCMVDLLAKGGCLEEAEDFINA 354
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQ--QLLELLPDNGGSYVILSNRYSSSRKWK 224
MPM D + L+ AC++H + E AER + +L + + GSY++ SN Y+S+ KW
Sbjct: 355 MPMKPDAVIWRTLIWACKVHADTERAERLMKHLELQGMSAHDSGSYILASNVYASTGKWC 414
Query: 225 KVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAG 260
+RELM ++ + KPPG IEVDGVVHEFV K G
Sbjct: 415 DKAEVRELMNKKGLVKPPGSSRIEVDGVVHEFVMGDYDHPDTEKIFIKLDQMVDKLRKEG 474
Query: 261 FVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATN 320
+ P SEV+ +MD+EEK L H+EKLA+ +GL+ PG IRI+KNLR C DCH
Sbjct: 475 YNPKVSEVMLEMDDEEKAIQLLHHSEKLALAYGLIRTCPGSKIRIVKNLRSCEDCHEFMK 534
Query: 321 IISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ISKVY R+ +V DR RFHHFKNG CSCKD+W
Sbjct: 535 LISKVYQRDIIVRDRIRFHHFKNGDCSCKDYW 566
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 212/390 (54%), Gaps = 47/390 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E LL+F E+Q G T S+ A +GALE G W+H +++K + +G +
Sbjct: 248 ETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTI 307
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
KDV+T +++ A G G +A+ +F EM+ GV +
Sbjct: 308 LDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQ 367
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
ITF+ +L ACSH GLV E +F++M E Y + P I+HY +V +LGRAG + A I
Sbjct: 368 ITFLSILTACSHGGLVKEGKQYFDMMKE-YNLEPEIDHYVTVVDLLGRAGLLNDALVFIF 426
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MPM V G LLG+CR+H N + + AA + EL PD+ G V+L N Y+S+ +W
Sbjct: 427 KMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDA 486
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
R+R++M +KK P C +E++ VH FV KAG+
Sbjct: 487 AARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGY 546
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VPN VL +DE+E++ L H+EK+A+ F L++ G IRI+KN+R+C DCH+A
Sbjct: 547 VPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRY 606
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDF 351
ISKV+ RE VV D NRFHHF +GSCSC D+
Sbjct: 607 ISKVFKREIVVRDTNRFHHFSSGSCSCGDY 636
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/393 (40%), Positives = 220/393 (55%), Gaps = 49/393 (12%)
Query: 9 EALLLFREVQHKG--LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV------- 59
EAL LF ++ + + T+ L+AC LGAL G +H Y+++ E
Sbjct: 479 EALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVAN 538
Query: 60 ----------DVGLGMALKDVM------TLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
DV + D M + T+L+ M G+G +AL+ FYEMQ + P
Sbjct: 539 CLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVP 598
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
D +TFV VL ACSH+G+VD+ I++FN M++ +G+ P EHY C+V +L RAGR+ +A EL
Sbjct: 599 DGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMEL 658
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
I+ MPM V LL ACR++ N+E E AA QLLEL N GSY +LSN Y+++R W
Sbjct: 659 IRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCW 718
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVHEF-----------------------VKA- 259
K V RIR LM IKK PGC ++ F +KA
Sbjct: 719 KDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKAL 778
Query: 260 GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
G+VP+ L D+D+EEK L+ H+EKLA+ +G+++ PG IRI KNLR C DCH+A
Sbjct: 779 GYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAF 838
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS + E +V D +RFHHFKNGSCSC+ +W
Sbjct: 839 TYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 871
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 10/132 (7%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E+ L L+R +Q G D T +L AC + + G +H + E +V +G
Sbjct: 127 EDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVG--- 183
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISH 127
L+ + CG A + F EM+ RGV D +++ ++ A G +
Sbjct: 184 ------NGLVSMYGRCGAWENARQVFDEMRERGVG-DLVSWNSIVAAYMQGGDSIRAMKM 236
Query: 128 FNLMSEKYGIRP 139
F M+E GIRP
Sbjct: 237 FERMTEDLGIRP 248
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 23/154 (14%)
Query: 1 YVEDSACEEALLLF-REVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y++ A+ +F R + G+ D V++V++L AC +GA G +H Y ++ +
Sbjct: 224 YMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFE 283
Query: 60 DVGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
DV +G M +KDV++ A++ + G+ + AL F +++
Sbjct: 284 DVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIR 343
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLM 131
++ + +T+ V+ + GL E + F M
Sbjct: 344 EEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQM 377
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 15/110 (13%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEAL +F E+Q L D VT V +L AC+H G ++ G+ Y N + V G
Sbjct: 582 EEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGI---NYFNGMNKDFGVVPGAE- 637
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG--VKPDAITFVGVLVAC 115
++ +L+ G+ ++A+E IRG +KP +V +L AC
Sbjct: 638 ----HYACMVDLLSRAGRLDEAMEL-----IRGMPMKPTPAVWVALLSAC 678
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/398 (37%), Positives = 215/398 (54%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EEAL +F E++ G + ++ T L C + ALE+G +H ++K E
Sbjct: 366 YAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETG 425
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL KDV++ +I A G G +AL F M+
Sbjct: 426 CFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKK 485
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVKPD IT VGVL ACSH+GL+D +F M Y ++P+ +HY C++ +LGRAGR+
Sbjct: 486 AGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLE 545
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE L++NMP G LLGA RIH N E E+AA+ + ++ P N G YV+LSN Y+
Sbjct: 546 EAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYA 605
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+S +W V ++R M E ++K G +EV +H F
Sbjct: 606 ASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDL 665
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G+V + VL D++EEEKE L H+EKLA+ FG+++ G IR++KNLRVC D
Sbjct: 666 KMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCQD 725
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ISK+ R ++ D +RFHHF G CSC D+W
Sbjct: 726 CHNAIKHISKIVGRLIILRDSHRFHHFSEGICSCGDYW 763
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/398 (35%), Positives = 221/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ EAL LFR++ + V S++ AC HL L +G LH Y+++ +
Sbjct: 318 YVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSN 377
Query: 61 VGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL D+ ++ TA+I+ A+ G G++A+ F EM+
Sbjct: 378 IFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKR 437
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+GVKP+ + FV VL ACSH GLVDE +FN M++ YG+ +EHY + +LGRAG++
Sbjct: 438 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 497
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A I M + V LL +C +H NLE AE+ A+++ + +N G+YV++ N Y+
Sbjct: 498 EAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYA 557
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S+ +WK++ ++R M ++ ++K P C IE+ H FV
Sbjct: 558 SNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVME 617
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+V + S VL D+DEE K L H+E+LA+ FG+++ PG IR+ KN+R+C D
Sbjct: 618 QMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTD 677
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ISK+ RE +V D +RFHHF G+CSC D+W
Sbjct: 678 CHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + E+AL + RE+ L D T+ S+L + + G +H Y+++K I+ D
Sbjct: 217 YAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSD 276
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G +L +D ++ +L+ G+ N+AL F +M
Sbjct: 277 VYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVT 336
Query: 99 RGVKPDAITFVGVLVACSH 117
VKP A+ F V+ AC+H
Sbjct: 337 AKVKPGAVAFSSVIPACAH 355
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 218/397 (54%), Gaps = 45/397 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y EA+ F+ + + + + LL C LGA ++G +H +K ++ +
Sbjct: 526 YAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSE 585
Query: 61 VGLGMAL---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ + AL +D+ T +I A G G +A++ + M+
Sbjct: 586 LIVANALISMYFKCGCADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESA 645
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
GV P+ +TFVG+L ACSHAGLVDE F MS+ YG+ P EHY C+V +LGR G +
Sbjct: 646 GVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQG 705
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
AE+ I +MP+ D + LLGAC+IH N E +RAA++L + P N G+YV+LSN YSS
Sbjct: 706 AEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSS 765
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA-------------------- 259
W +V +R++M ++ + K PGC ++ +H FV
Sbjct: 766 LGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTL 825
Query: 260 ----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
G+VP+ VL D+DEE+KE++L H+EKLA+ + L++ G+ I+I+KNLR+C DC
Sbjct: 826 LKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDC 885
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
HT +S V R+ + D NRFHHF+NGSCSC+DFW
Sbjct: 886 HTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EEAL L +E+ G+ ++ S+ AC+++ ALE G +H ++ V
Sbjct: 394 YAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVH------SLAVK 447
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
VG + ALI + C + +EY ++ R V D +++ L A L
Sbjct: 448 VGCQF---NSFACNALITMYGKC----RNMEYARQVFSRMVTKDIVSWNSFLAALVQNDL 500
Query: 121 VDERISHFNLM 131
+DE + F+ M
Sbjct: 501 LDEARNTFDNM 511
>gi|356550382|ref|XP_003543566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 572
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/394 (39%), Positives = 221/394 (56%), Gaps = 50/394 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV--DVGLGMA 66
EA+ LF + G+ ++ T++S+L AC GAL +G +H + + IE+ + A
Sbjct: 179 EAINLFERMLQCGVEVNEATVISVLRACADSGALSMGRKVHANLEEWGIEIHSKSNVSTA 238
Query: 67 L----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
L +DV TA+I LA G A++ F +M+ GVKPD
Sbjct: 239 LVDMYAKGGCIASARKVFDDVVHRDVFVWTAMISGLASHGLCKDAIDMFVDMESSGVKPD 298
Query: 105 AITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
T VL AC +AGL+ E F+ + +YG++PSI+H+GCLV +L RAGR+ +AE+ +
Sbjct: 299 ERTVTAVLTACRNAGLIREGFMLFSDVQRRYGMKPSIQHFGCLVDLLARAGRLKEAEDFV 358
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQL--LELLPDNGGSYVILSNRYSSSRK 222
MP+ D + L+ AC++H + + AER + L ++ D+ GSY++ SN Y+S+ K
Sbjct: 359 NAMPIEPDTVLWRTLIWACKVHGDADRAERLMKHLEIQDMRADDSGSYILASNVYASTGK 418
Query: 223 WKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------K 258
W +RELM ++ + KPPG IEVDG VHEFV K
Sbjct: 419 WCNKAEVRELMNKKGLVKPPGTSRIEVDGGVHEFVMGDYNHPEAEEIFVELAEVVDKIRK 478
Query: 259 AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTA 318
G+ P SEVL +MD+EEK L H+EKLA+ +GL+ G IRI+KNLR C DCH
Sbjct: 479 EGYDPRVSEVLLEMDDEEKAVQLLHHSEKLALAYGLIRIGHGSTIRIVKNLRSCEDCHEF 538
Query: 319 TNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ISK+Y R+ +V DR RFHHFKNG CSCKD+W
Sbjct: 539 MKLISKIYKRDIIVRDRIRFHHFKNGECSCKDYW 572
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 151/398 (37%), Positives = 217/398 (54%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ E+L LFR+ +G+ ++ +VS+ AC+ L AL +G H Y++K D
Sbjct: 527 YSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTED 586
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G ++ K+V + A+IV + G G +A+E + M+
Sbjct: 587 AFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKK 646
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G PD T++G+L+AC HAGLV+E + +F M I P +EHY CL+ +L RAGR+
Sbjct: 647 VGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLD 706
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A L+ MP D+ + LL +CR LE E+ A++LLEL PD +YV+LSN Y+
Sbjct: 707 DALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYA 766
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
KW V+R+R++M E ++K GC IEV G V+ FV
Sbjct: 767 GLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEE 826
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G+ PN S VL ++ EEEK L H+EKLAI+FGL+ G +RI KNLR+C D
Sbjct: 827 RISEIGYKPNTSSVLHEVGEEEKIDILRGHSEKLAISFGLLKTTKGTTLRIYKNLRICAD 886
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A +ISK RE VV D RFHHF++G CSC D+W
Sbjct: 887 CHNAAKLISKAVEREIVVRDNKRFHHFRDGLCSCCDYW 924
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ ++ +AL L ++ + G D T+ SLLLAC HL +L+ G +H Y+++ +E D
Sbjct: 426 HAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETD 485
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G +L K++++ A+I + G ++L F +
Sbjct: 486 FFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLS 545
Query: 99 RGVKPDAITFVGVLVACSH 117
G++ I V V ACS
Sbjct: 546 EGIQSHEIAIVSVFGACSQ 564
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 24/128 (18%)
Query: 12 LLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL---- 67
LL + +GL D VT+V++L C G +++GM +H +K + +V + A+
Sbjct: 234 LLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMY 293
Query: 68 ------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG--VKPDAIT 107
K+V++ +I ++ G N+A EMQI+G +K + +T
Sbjct: 294 SKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVT 353
Query: 108 FVGVLVAC 115
+ VL AC
Sbjct: 354 ILNVLPAC 361
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 23/132 (17%)
Query: 9 EALLLFREVQHKG--LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK---KNIEVDVGL 63
EA L +E+Q +G + ++VT++++L AC L LH Y + +++E+
Sbjct: 332 EAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQHVELSNAF 391
Query: 64 ------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
G+ K V + ALI A G KAL ++M G +PD
Sbjct: 392 ILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDW 451
Query: 106 ITFVGVLVACSH 117
T +L+AC+H
Sbjct: 452 FTISSLLLACAH 463
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 218/397 (54%), Gaps = 45/397 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y EA+ F+ + + + + LL C LGA ++G +H +K ++ +
Sbjct: 526 YAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSE 585
Query: 61 VGLGMAL---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ + AL +D+ T +I A G G +A++ + M+
Sbjct: 586 LIVANALISMYFKCGCADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESA 645
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
GV P+ +TFVG+L ACSHAGLVDE F MS+ YG+ P EHY C+V +LGR G +
Sbjct: 646 GVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQG 705
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
AE+ I +MP+ D + LLGAC+IH N E +RAA++L + P N G+YV+LSN YSS
Sbjct: 706 AEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSS 765
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA-------------------- 259
W +V +R++M ++ + K PGC ++ +H FV
Sbjct: 766 LGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTL 825
Query: 260 ----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
G+VP+ VL D+DEE+KE++L H+EKLA+ + L++ G+ I+I+KNLR+C DC
Sbjct: 826 LKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDC 885
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
HT +S V R+ + D NRFHHF+NGSCSC+DFW
Sbjct: 886 HTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EEAL L +E+ G+ ++ S+ AC+++ ALE G +H ++ V
Sbjct: 394 YAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVH------SLAVK 447
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
VG + ALI + C + +EY ++ R V D +++ L A L
Sbjct: 448 VGCQF---NSFACNALITMYGKC----RNMEYARQVFSRMVTKDIVSWNSFLAALVQNDL 500
Query: 121 VDERISHFNLM 131
+DE + F+ M
Sbjct: 501 LDEARNTFDNM 511
>gi|317106766|dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
Length = 563
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/390 (41%), Positives = 222/390 (56%), Gaps = 48/390 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL++FRE+Q G+ D+V++V +L AC +GAL++G W+H YI K+ I VD+ L AL
Sbjct: 176 EALIMFREMQVVGIEPDEVSLVGVLSACAMVGALDIGKWVHAYIKKRMIHVDLELNTALI 235
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
KD +++IV LA+ G AL F M+ KP+ +
Sbjct: 236 NMYAKCGCIEKAREIFDEMRVKDSKAWSSMIVGLAIHGLAEDALNVFSRMEEAQAKPNHV 295
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF+G+L AC+H GLV + +++ M E GI PS+EHYGC+V +L R G I +A +
Sbjct: 296 TFIGILSACAHGGLVSDGKRYWSSMLE-LGIEPSMEHYGCMVDLLCRGGLIDEAYDFALI 354
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
+P D + LL A + L+ AE A +LLEL P +Y+IL+N Y+S + +KV
Sbjct: 355 IPTP-DPVIWRTLLVAYTKNRMLQKAEMVAGKLLELEPWKAENYIILANLYASVSQLEKV 413
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------------AGFV 262
+R++M E IK PGC IEVDG VH FV +G+
Sbjct: 414 SHVRKMMKENGIKALPGCTSIEVDGFVHNFVTGDWSHPEAEEIKKTLRDVALKILISGYK 473
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P S VL +++EEKE L H+E+LAI +GL+ IRI+KNLRVC DCH T II
Sbjct: 474 PFVSVVLHLVNDEEKENVLYEHSERLAIAYGLMKTKAPATIRIVKNLRVCGDCHEVTKII 533
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SK+Y+RE +V DR RFH F NG+CSCKD+W
Sbjct: 534 SKIYDREIIVRDRVRFHKFVNGTCSCKDYW 563
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 26/184 (14%)
Query: 8 EEALLLFREVQHKGLTG-DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMA 66
+E + LF+++ KG + TM +L AC+ + ALE G +H I++ + +
Sbjct: 73 KEPIHLFKDMVGKGYPNPNTFTMAFVLKACSIIMALEEGKQIHAQILRSGFSSSPYVQSS 132
Query: 67 L----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
L ++++ +A++ A G N+AL F EMQ+ G++PD
Sbjct: 133 LVNFYSKCEEITIARKVFDEITERNLVCWSAMVSGYARLGMINEALIMFREMQVVGIEPD 192
Query: 105 AITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
++ VGVL AC+ G +D + H + +K I +E L+ + + G I KA E+
Sbjct: 193 EVSLVGVLSACAMVGALDIGKWVHAYI--KKRMIHVDLELNTALINMYAKCGCIEKAREI 250
Query: 164 IKNM 167
M
Sbjct: 251 FDEM 254
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/399 (38%), Positives = 223/399 (55%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
YV++S E+AL +F+ V+ + ++ T+ S+LL C++L AL G +H + K +
Sbjct: 219 YVKNSRAEDALWVFKTMVRDADVRPNESTLSSVLLGCSNLSALGFGRQVHQWCTKLPLSR 278
Query: 60 DVGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
V G M ++DV+ A+I A G G +A+E F +M+
Sbjct: 279 RVTAGTSLVSMYCKCGDLDGACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKMK 338
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+GV+P+ ITFV VL AC H G+ D + F M E YGI ++HY C+V +L RAG +
Sbjct: 339 SQGVEPNWITFVAVLTACIHTGMCDFGMQCFERMQEVYGIEARVDHYSCMVDLLCRAGSL 398
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A LI++MP G LL A R++ N+E AE AA +L+E P N G+YV L+N Y
Sbjct: 399 ERAVSLIRSMPFQPHPSAYGTLLNASRVYKNMEFAEFAAGKLIEQNPQNAGAYVQLANIY 458
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF--------------------- 256
+ + +W V R+R M + + K PG +E++GV+H F
Sbjct: 459 AVANQWADVSRVRRWMKDNAVVKTPGYSWVEINGVIHVFRSNDRLHPQLSLIHERLCQLE 518
Query: 257 --VKA-GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+KA G+VP+ L D+DE K L H+EKLAI FGL+S PG+ +RI KNLRVC
Sbjct: 519 ERMKAMGYVPDLDFALHDVDESLKVQMLMRHSEKLAIAFGLLSTAPGITLRIFKNLRVCG 578
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTA +ISK+ +RE ++ D RFHHF++G CSC D+W
Sbjct: 579 DCHTAAKLISKIEDREIILRDTTRFHHFRSGHCSCGDYW 617
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/399 (37%), Positives = 224/399 (56%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHP---------- 50
YV++ +AL LFR + ++G + T+ ++L + L LE G +H
Sbjct: 384 YVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESST 443
Query: 51 ----------YIMKKNIEVD---VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
Y NI V L K++++ T++I+ LA G G +A+ F M
Sbjct: 444 PSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERML 503
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G+KPD IT+VGVL AC+H GLV++ ++N+M+E + I P++ HY C++ + GRAG +
Sbjct: 504 SVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLL 563
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A I++MP+ D+ G LL +C+IH N + A+ AA++LL + P N G+Y+ L+N Y
Sbjct: 564 QEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVY 623
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF--------------------- 256
S+ KW+ + R+LM +R ++K G I + VH F
Sbjct: 624 SACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIW 683
Query: 257 ---VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
K GF+P+ VL D++EE KE L H+EKLAI FGL++ +RI+KNLRVCN
Sbjct: 684 EEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCN 743
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+A ISK+ RE +V D RFHHFK+GSCSC+D+W
Sbjct: 744 DCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 63/156 (40%), Gaps = 29/156 (18%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y + EAL +F + + L D T+ S+L AC +L L +G +H YI++ E
Sbjct: 249 YSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETET 308
Query: 60 DVGLGMAL------------------------KDVMTLTALIVVLAMCGQGNKALEYFYE 95
+G AL +++ T+L+ G A E F +
Sbjct: 309 SGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNK 368
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLM 131
++ R D + + ++V GL ++ + F LM
Sbjct: 369 LRDR----DVVAWTAMIVGYVQNGLWNDALELFRLM 400
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/402 (37%), Positives = 225/402 (55%), Gaps = 50/402 (12%)
Query: 1 YVEDSACEEALLLFREVQHK--GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK---- 54
Y + +AL +F E+ K + + T+ +L+AC HL AL +G +H Y+ +
Sbjct: 485 YAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEY 544
Query: 55 ----------------KNIEVDVGL----GMALKDVMTLTALIVVLAMCGQGNKALEYFY 94
K +VD M ++ ++ T+++ M G+G +AL+ F
Sbjct: 545 EPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFD 604
Query: 95 EMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRA 154
+MQ G PD I+F+ +L ACSH+G+VD+ +++F++M Y + S EHY C++ +L R
Sbjct: 605 KMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARC 664
Query: 155 GRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILS 214
GR+ KA + I+ MPM + LL ACR+H N+E AE A +L+ + +N GSY ++S
Sbjct: 665 GRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLIS 724
Query: 215 NRYSSSRKWKKVKRIRELMAERNIKKPPGCILIE-VDGVVHEFVK--------------- 258
N Y+++R+WK V RIR+LM + IKK PGC ++ G FV
Sbjct: 725 NIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLE 784
Query: 259 --------AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLR 310
G+VP + L D+D+EEK L+ H+EKLA+ +GL++ PG IRI KNLR
Sbjct: 785 RLIGRIKVMGYVPETNFALHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLR 844
Query: 311 VCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
VC DCH+A ISK+ + E +V D +RFHHFKNGSCSC +W
Sbjct: 845 VCGDCHSAFTYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 39/207 (18%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y + +EAL F+++ G + VT++SLL AC LGAL GM +H Y +KK
Sbjct: 370 YAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSL 429
Query: 56 ----------------NIEVDV---------------GLGMALKDVMTLTALIVVLAMCG 84
N +D+ + ++V+T T +I A G
Sbjct: 430 DNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYG 489
Query: 85 QGNKALEYFYEM--QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIE 142
N AL+ F EM + V P+A T +L+AC+H + ++ + PS+
Sbjct: 490 DSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVY 549
Query: 143 HYG-CLVYILGRAGRIAKAEELIKNMP 168
CL+ + + G + A + +MP
Sbjct: 550 FVANCLIDMYSKCGDVDTARNVFDSMP 576
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 15/107 (14%)
Query: 1 YVEDSACEEALLLFREVQ---HKGLTGDK---VTMVSLLLACTHLGALEVGMWLHPYIMK 54
+V+ S AL LF E+ H+ T ++ +++V++L AC L AL +H Y ++
Sbjct: 228 HVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIR 287
Query: 55 KNIEVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV 101
D ALI A CG N A++ F M+ + V
Sbjct: 288 NG---------TFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDV 325
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/399 (37%), Positives = 224/399 (56%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHP---------- 50
YV++ +AL LFR + ++G + T+ ++L + L LE G +H
Sbjct: 384 YVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESST 443
Query: 51 ----------YIMKKNIEVD---VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
Y NI V L K++++ T++I+ LA G G +A+ F M
Sbjct: 444 PSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERML 503
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G+KPD IT+VGVL AC+H GLV++ ++N+M+E + I P++ HY C++ + GRAG +
Sbjct: 504 SVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLL 563
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A I++MP+ D+ G LL +C+IH N + A+ AA++LL + P N G+Y+ L+N Y
Sbjct: 564 QEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVY 623
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF--------------------- 256
S+ KW+ + R+LM +R ++K G I + VH F
Sbjct: 624 SACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIW 683
Query: 257 ---VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
K GF+P+ VL D++EE KE L H+EKLAI FGL++ +RI+KNLRVCN
Sbjct: 684 EEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCN 743
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+A ISK+ RE +V D RFHHFK+GSCSC+D+W
Sbjct: 744 DCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 29/156 (18%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y + EAL++F + + L D T+ S+L AC +L L +G +H YI++ E
Sbjct: 249 YSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETET 308
Query: 60 DVGLGMAL------------------------KDVMTLTALIVVLAMCGQGNKALEYFYE 95
+G AL +++ T+L+ G A E F +
Sbjct: 309 SGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNK 368
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLM 131
++ R D + + ++V GL ++ + F LM
Sbjct: 369 LRDR----DVVAWTAMIVGYVQNGLWNDALELFRLM 400
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/399 (36%), Positives = 225/399 (56%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL FRE+ +G+ + + +S+L C L + G LH +++ + + D
Sbjct: 308 YEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTD 367
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V AL KDV+ ++I A G G +AL F ++++
Sbjct: 368 VFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRL 427
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ PD IT++GVL ACS+ G V E FN M IR HY C+V +LGRAG +
Sbjct: 428 ARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVD 487
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI NMP+ D + G L+GACR+H N E AE AA++LLEL P + G YV+LS+ Y+
Sbjct: 488 EALDLINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEPGSAGPYVLLSHIYT 547
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
S+ +W+ +R+ ++ RN+ K PGC IE + +VH F
Sbjct: 548 STGRWEDASDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLSHPEHAIILNMLEELD 607
Query: 257 ---VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+++G+ + S VL D+DEE+K +L H+E+ A+ +GL+ G+ IR++KNLRVC
Sbjct: 608 GLLMESGYSADGSFVLHDVDEEQKAQSLRYHSERQAVAYGLLKVPAGMPIRVMKNLRVCG 667
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+A +I+K+ +RE ++ D NRFHHFK+G CSC+D+W
Sbjct: 668 DCHSAIKLITKITSREIILRDANRFHHFKDGLCSCRDYW 706
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 144/391 (36%), Positives = 221/391 (56%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E L L+ ++ GL DK+T+VS++ + L L G +H +K V + +L
Sbjct: 172 EGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSL 231
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D + +++I G+G +A+ F +M+ G+ +
Sbjct: 232 ISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGND 291
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TF+ +L ACSH GL ++ + F LM EKYG++P +EHY C+V +LGR+G + +AE +I+
Sbjct: 292 VTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIR 351
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MP+ D + LL ACRIH N + A R A+++L L P + +YV+LSN ++S+++WK
Sbjct: 352 SMPLEADVVIWKTLLSACRIHRNADMATRTAEEILRLNPQDSATYVLLSNIHASAKRWKD 411
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GF 261
V ++R M +RN+KK PG +EV V +F G+
Sbjct: 412 VSKVRTTMRDRNVKKEPGVSWLEVKNRVFQFSMGDKSHPMSEEIDLYLKELMEEMKLRGY 471
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ + V D D EEKE +L H+EKLAI FGL++ PG IR++KNLR+C+DCH A +
Sbjct: 472 VPDTATVFHDTDSEEKENSLVNHSEKLAIAFGLMNIPPGSPIRVMKNLRICSDCHVAIKL 531
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS + NRE +V D +RFHHFK+G CSC D+W
Sbjct: 532 ISDINNREIIVRDTSRFHHFKHGKCSCGDYW 562
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 22/131 (16%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG--- 64
E L LFRE+ G D+ T+ S+L C L A G +H Y++K E ++ +G
Sbjct: 71 ENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSL 130
Query: 65 -------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
M +++V+ LI A G L+ + M++ G++PD
Sbjct: 131 AHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDK 190
Query: 106 ITFVGVLVACS 116
IT V V+ + +
Sbjct: 191 ITLVSVISSSA 201
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/398 (37%), Positives = 220/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EEA+ F ++Q G+ D T+ S++ +C +L +LE G H + +
Sbjct: 351 YGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISF 410
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL KD +T TAL+ A G+ N+ + F M
Sbjct: 411 ITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLA 470
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD +TF+GVL ACS AGLV++ F M ++GI P +HY C++ + RAGRI
Sbjct: 471 HGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIE 530
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A I MP + D LL +CR + N++ + AA+ L+EL P N SYV+LS+ Y+
Sbjct: 531 EARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYA 590
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
+ KW++V R+R+ M ++ ++K PGC I+ VH F
Sbjct: 591 AKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNY 650
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+K G+VP+ + VL D+ + EK LN H+EKLAI FGL+ PG+ IR++KNLRVC+D
Sbjct: 651 KMIKEGYVPDMNSVLHDVGDSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSD 710
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT ISK+ NRE +V D RFH FK+G+CSC DFW
Sbjct: 711 CHNATKYISKITNREILVRDTARFHLFKDGTCSCGDFW 748
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ ++ +A+ +FRE++ + L D+ T S+L AC + AL+ G +H YI++ + + +
Sbjct: 250 FTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDN 309
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL K+V++ TA++V G +A++ F +MQ
Sbjct: 310 IFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQK 369
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD T V+ +C++ ++E + F+ + G+ I LV + G+ G I
Sbjct: 370 YGIEPDDFTLGSVISSCANLASLEEG-AQFHARALTSGLISFITVSNALVTLYGKCGSIE 428
Query: 159 KAEELIKNM 167
+ L +
Sbjct: 429 DSHRLFNEI 437
>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Brachypodium distachyon]
Length = 647
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 224/397 (56%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
++ E AL F ++ + D VT VS + C+ L AL G +H ++K ++ V
Sbjct: 251 TQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQVIKAGVDKVV 310
Query: 62 GL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ G D+ L+A+I GQG+KA+E F +M
Sbjct: 311 PVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVELFKQMMNG 370
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G +P+ +TF+ +L ACSH+GL DE + F LM++ YG +PS++HY C+V +LGR+G + +
Sbjct: 371 GAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLGRSGCLDE 430
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
AE LI +MP+ D + LL AC+ N + AER A++++E P + YV+LSN ++
Sbjct: 431 AEALILSMPVRADGVIWKTLLSACKTQKNFDMAERIAERVIESDPRDSAPYVLLSNIRAT 490
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
S++W V +R++M E++I+K PG +E G VH+F
Sbjct: 491 SKRWGDVTEVRKIMREKDIRKEPGVSWVEHKGQVHQFCTGDKSHPRQGEIDEYLKEMMGK 550
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+ G+ P+ + V DM++EEKE +L H+EKLAI F ++ GV IR++KNLRVC+DC
Sbjct: 551 IRQCGYAPDMTMVFHDMEDEEKEVSLTHHSEKLAIAFAFLNLPEGVPIRVMKNLRVCDDC 610
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H A +IS+V RE VV D +RFHHF++G CSC D+W
Sbjct: 611 HVAIKLISQVTGREIVVRDVSRFHHFRDGRCSCGDYW 647
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E++L F ++ +G+ D+ + S+ C L + G +H Y+++ ++ D+ +G +L
Sbjct: 156 EDSLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSL 215
Query: 68 K----------------------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+++ I G ALEYF M+ V PD
Sbjct: 216 AHMYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDV 275
Query: 106 ITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+TFV + CS A L + H ++ K G+ + LV++ R G + +E +
Sbjct: 276 VTFVSAISCCSDLAALAQGQQVHAQVI--KAGVDKVVPVITSLVHMYSRCGCLGDSERVY 333
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGS 209
LD F+L ++ AC H A +Q++ NGG+
Sbjct: 334 DGY-CGLDLFLLSAMISACGFHGQGHKAVELFKQMM-----NGGA 372
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 70/169 (41%), Gaps = 33/169 (19%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI------------EVDVGLG------MA 66
D+ T +LLLA LG L L I K+N+ D+G M
Sbjct: 76 DRFTTNNLLLAYADLGDLPTARHLFEGISKRNVMSWNILIGGCIKNGDLGSARELFDKMP 135
Query: 67 LKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD---E 123
++V T A++ L G +L++F M+ G+ PD V C AGL+D
Sbjct: 136 TRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCC--AGLLDVVSG 193
Query: 124 RISHFNLMSEKYGIRPSIEHYGC----LVYILGRAGRIAKAEELIKNMP 168
R H Y +R ++ C L ++ R G +A+ E +++ +P
Sbjct: 194 RQVH------AYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALP 236
>gi|413937223|gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays]
Length = 625
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/395 (39%), Positives = 220/395 (55%), Gaps = 51/395 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK-------NIEVD 60
EAL +F ++ G D V + S+L AC HLGALE G W+H ++ + N+ ++
Sbjct: 232 SEALRMFDQMMGNGFRPDAVVLSSVLKACAHLGALERGRWVHRFLKAEGLGRSPDNVMLE 291
Query: 61 VGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVK 102
L G+ +DV+ A+I LAM G G +ALE F M G
Sbjct: 292 TALVDMYCKCGCMDEAWWVFDGVQSQDVVLWNAMIGGLAMNGHGKRALELFRRMLDMGFV 351
Query: 103 PDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE 162
P+ TFV VL AC+H G VDE F M + +GI P EHYGCL +LGRAG + +AE
Sbjct: 352 PNESTFVVVLCACTHTGRVDEGKEIFRSMCD-HGIEPRREHYGCLADLLGRAGLLEEAEA 410
Query: 163 LIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRK 222
++ +MPM G L+ +C +H+N+ ER ++L+EL PD+GG YV+L N Y+ +
Sbjct: 411 VLLDMPMEPHASQWGALMSSCLMHNNVGVGERVGKKLIELEPDDGGRYVVLFNLYAVNGL 470
Query: 223 WKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA----------------------- 259
W+ K +R++M ER KK G IE +G+VHEF
Sbjct: 471 WEDAKALRKMMEERGAKKETGLSFIEWNGLVHEFRSGDTRHPQTRQIYALLEDMEQRLQL 530
Query: 260 -GFVPNKSEVLFDM-DEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHT 317
G+V + S+VL DM DEE+K L+ H+E+LA+ FG+++ + IRI+KNLRVC DCH
Sbjct: 531 IGYVKDTSQVLMDMDDEEDKGNTLSYHSERLALAFGILNTPRHMPIRIVKNLRVCRDCHV 590
Query: 318 ATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
++SK+Y RE ++ DR+RFH F+ G CSC DFW
Sbjct: 591 YAKLVSKLYQREIIMRDRHRFHLFRGGVCSCNDFW 625
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 60 DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
+V + M + +++ +A+I G+ ++AL F +M G +PDA+ VL AC+H G
Sbjct: 205 EVFVRMPERGLVSWSAMIDACIRAGEFSEALRMFDQMMGNGFRPDAVVLSSVLKACAHLG 264
Query: 120 LVDE-RISHFNLMSEKYGIRP 139
++ R H L +E G P
Sbjct: 265 ALERGRWVHRFLKAEGLGRSP 285
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/390 (37%), Positives = 221/390 (56%), Gaps = 47/390 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EAL F ++Q + + D T VS++ A L W+H +M+ ++ +V + AL
Sbjct: 421 EALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALV 480
Query: 69 D----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
D V T A+I G G ALE F EMQ ++P+ +
Sbjct: 481 DMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGV 540
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF+ V+ ACSH+GLV+ + F++M E Y I PS++HYG +V +LGRAGR+ +A + I
Sbjct: 541 TFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQ 600
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP+ V G +LGAC+IH N+ AE+ A++L EL P++GG +V+L+N Y ++ W+KV
Sbjct: 601 MPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKV 660
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGFV 262
++R M + ++K PGC ++E+ VH F +AG+V
Sbjct: 661 GQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYV 720
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ + ++ ++++ KE L+ H+EKLAI+FGL++ G I + KNLRVC DCH AT I
Sbjct: 721 PD-TNLILGLEDDVKEQLLSSHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYI 779
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S V RE +V D RFHHFKNG+CSC D+W
Sbjct: 780 SLVTGREIIVRDMQRFHHFKNGACSCGDYW 809
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 22/136 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI----MKKN 56
YV++ +EA+++F+++ +G+ V+++ L AC LG LE G ++H + +N
Sbjct: 312 YVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRN 371
Query: 57 I--------------EVDVGLGM----ALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ EVD M + +++ A+I+ A G+ +AL YF +MQ
Sbjct: 372 VSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQA 431
Query: 99 RGVKPDAITFVGVLVA 114
R VKPD T+V V+ A
Sbjct: 432 RTVKPDTFTYVSVITA 447
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 22/141 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ AL + + + L +T+VS+L A + L + +G +H Y M+ +
Sbjct: 211 YSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSL 270
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL D V++ ++I +A+ F +M
Sbjct: 271 VNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLD 330
Query: 99 RGVKPDAITFVGVLVACSHAG 119
GVKP ++ +G L AC+ G
Sbjct: 331 EGVKPTDVSVMGALHACADLG 351
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 164/400 (41%), Positives = 233/400 (58%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREV--QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
Y ++ EAL LFRE+ + + L + VTMVS+L AC L ALE G +H YI++K ++
Sbjct: 251 YAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLD 310
Query: 59 VDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+ + AL +DV++ +LI + G G KA+ F EM
Sbjct: 311 SILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEM 370
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
GV+P I+FV VL ACSHAGLVDE FN M +GI PS+EHY C+V +LGRA R
Sbjct: 371 TYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANR 430
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A ++I+NM + V G LLG+CRIH N+E AERA+ +L +L P N G+YV+L++
Sbjct: 431 LEEAAKIIENMRIEPGPKVWGSLLGSCRIHCNVELAERASIRLFDLEPTNAGNYVLLADI 490
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+ + W VKR+++L+ R ++K PG IEV ++ FV
Sbjct: 491 YAEAGMWDGVKRVKKLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVKL 550
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+ G+VP VL+D+ EKE + H+EKLA+ FGL++ G +IRI K+LR+C
Sbjct: 551 SMELKEEGYVPQTKVVLYDLKAAEKERIVLGHSEKLAVAFGLINSSKGEVIRITKSLRLC 610
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+ T ISK N+E +V D NRFHHF++G CSC D+W
Sbjct: 611 EDCHSFTKFISKFANKEILVRDVNRFHHFRDGVCSCGDYW 650
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/396 (38%), Positives = 227/396 (57%), Gaps = 44/396 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWL-----------H 49
Y ++ L L+R + G+ D VT+V +L +C +LGA VG + +
Sbjct: 219 YAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSN 278
Query: 50 PYIMKKNIEV-----------DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
P++ I + V GM + +++ TA+I M G G A++ F EM
Sbjct: 279 PFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIR 338
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD FV VL ACSHAGL D+ + +F +M Y + P EHY C+V +LGRAGR+
Sbjct: 339 SGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLK 398
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A+ LI++MP+ D V G LLGAC+IH N+E AE A ++++EL P+N G YV+LSN YS
Sbjct: 399 EAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYS 458
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFDMDEE--- 275
++ K V RIR +M E+ +KK PGC +E+ G VH F+ +S+ ++ + EE
Sbjct: 459 NANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEA 518
Query: 276 ---------EKE----------TALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCH 316
EK+ T + +H+EKLA+ FGL++ G + IIKNLR+C DCH
Sbjct: 519 IIMQEFGKPEKDNREESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCH 578
Query: 317 TATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
++SK+ +R+ V D RFHHF+NGSCSCKD+W
Sbjct: 579 LFFKMVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 614
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 122/270 (45%), Gaps = 34/270 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV +S C +A+LLFR++ +G+ + VT++ L+ AC LE+G LH +K + D
Sbjct: 118 YVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSD 177
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + M +K +++ A++ A G LE + M +
Sbjct: 178 VSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDM 237
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISH---FNLMSEKYGIRPSIEHYGCLVYILGRAG 155
GV PD +T VGVL +C++ G + + H F + + + P + + L+ + R G
Sbjct: 238 NGVHPDPVTLVGVLSSCANLGA--QSVGHEVEFKMQASGFTSNPFLNN--ALINMYARCG 293
Query: 156 RIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE--LLPDNGGSYVIL 213
+ KA+ + MP ++G +H + E A + ++++ + PD +L
Sbjct: 294 NLTKAQAVFDGMP-ERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVL 352
Query: 214 SNRYSSSRKWKKVKRIRELMAERNIKKPPG 243
S + + ++ + M +RN + PG
Sbjct: 353 SACSHAGLTDQGLEYFK--MMKRNYQLEPG 380
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/396 (38%), Positives = 227/396 (57%), Gaps = 44/396 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWL-----------H 49
Y ++ L L+R + G+ D VT+V +L +C +LGA VG + +
Sbjct: 228 YAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSN 287
Query: 50 PYIMKKNIEV-----------DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
P++ I + V GM + +++ TA+I M G G A++ F EM
Sbjct: 288 PFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIR 347
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD FV VL ACSHAGL D+ + +F +M Y + P EHY C+V +LGRAGR+
Sbjct: 348 SGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLK 407
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A+ LI++MP+ D V G LLGAC+IH N+E AE A ++++EL P+N G YV+LSN YS
Sbjct: 408 EAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYS 467
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFDMDEE--- 275
++ K V RIR +M E+ +KK PGC +E+ G VH F+ +S+ ++ + EE
Sbjct: 468 NANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEA 527
Query: 276 ---------EKE----------TALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCH 316
EK+ T + +H+EKLA+ FGL++ G + IIKNLR+C DCH
Sbjct: 528 IIMQEFGKPEKDNREESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCH 587
Query: 317 TATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
++SK+ +R+ V D RFHHF+NGSCSCKD+W
Sbjct: 588 LFFKMVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 623
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 122/270 (45%), Gaps = 34/270 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV +S C EA+LLFR++ +G+ + VT++ L+ AC LE+G LH +K + D
Sbjct: 127 YVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSD 186
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + M +K +++ A++ A G LE + M +
Sbjct: 187 VSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDM 246
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISH---FNLMSEKYGIRPSIEHYGCLVYILGRAG 155
GV PD +T VGVL +C++ G + + H F + + + P + + L+ + R G
Sbjct: 247 NGVHPDPVTLVGVLSSCANLGA--QSVGHEVEFKIQASGFTSNPFLNN--ALINMYARCG 302
Query: 156 RIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE--LLPDNGGSYVIL 213
+ KA+ + MP ++G +H + E A + ++++ + PD +L
Sbjct: 303 NLTKAQAVFDGMP-ERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVL 361
Query: 214 SNRYSSSRKWKKVKRIRELMAERNIKKPPG 243
S + + ++ + M +RN + PG
Sbjct: 362 SACSHAGLTDQGLEYFK--MMKRNYQLEPG 389
>gi|115473599|ref|NP_001060398.1| Os07g0636900 [Oryza sativa Japonica Group]
gi|113611934|dbj|BAF22312.1| Os07g0636900, partial [Oryza sativa Japonica Group]
Length = 352
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/351 (41%), Positives = 204/351 (58%), Gaps = 46/351 (13%)
Query: 48 LHPYIMKKNIEVDVGLGMAL----------------------KDVMTLTALIVVLAMCGQ 85
+H ++ IE+D+ LG AL KDV T +++I+ LA G
Sbjct: 2 VHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGL 61
Query: 86 GNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYG 145
G+++L F +M G+KP+ +TFVGVL+AC+H GLV E +F M+E +GI P++EHYG
Sbjct: 62 GHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYG 121
Query: 146 CLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPD 205
C+V +LGR+G + +A +LI++M D + LLGACRIH N+E AE A +L L P
Sbjct: 122 CMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLDPL 181
Query: 206 NGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------- 257
G YV+LSN Y+ + W+ V +R+ + NI++ PG IE D +HEFV
Sbjct: 182 GDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRSSIEWDEKIHEFVSGDRLHPR 241
Query: 258 ----------------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGV 301
+AG+ P VL D+DE+ KE +L H+EKLAI F L++
Sbjct: 242 SKEIYRVLEEMMDRLKQAGYKPMTGLVLQDIDEQSKERSLAEHSEKLAIAFALLTTPARS 301
Query: 302 LIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IRI KNLR C DCH+A +IS VY+R+ +V DRNRFHHF G CSCKD+W
Sbjct: 302 TIRITKNLRACEDCHSAMKLISLVYDRKLIVRDRNRFHHFSEGQCSCKDYW 352
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/399 (37%), Positives = 222/399 (55%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREV-QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ EAL LF + + K + D+ T+ +L AC L A + G +H YIM+
Sbjct: 473 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
D + +L KD+++ T +I M G G +A+ F +M+
Sbjct: 533 DRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR 592
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G++ D I+FV +L ACSH+GLVDE FN+M + I P++EHY C+V +L R G +
Sbjct: 593 QAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDL 652
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA I+NMP+ D + G LL CRIH +++ AE+ A+++ EL P+N G YV+++N Y
Sbjct: 653 IKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIY 712
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ + KW++VKR+R+ + +R ++K PGC IE+ G V+ FV
Sbjct: 713 AEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVR 772
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ G+ P L D +E EKE AL H+EKLA+ G++S G +IR+ KNLRVC
Sbjct: 773 ARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCG 832
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH +SK+ RE V+ D NRFH FK+G CSC+ FW
Sbjct: 833 DCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 13/163 (7%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EA+ LF E++ +G++ D T+ ++L C L+ G +H +I E D
Sbjct: 372 YAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIK----END 427
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+G D+ AL+ + A CG +A F EM+++ D I++ ++ S
Sbjct: 428 LGF-----DIFVSNALMDMYAKCGSMQEAELVFSEMRVK----DIISWNTIIGGYSKNCY 478
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
+E +S FNL+ E+ P C++ K E+
Sbjct: 479 ANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREI 521
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 22/145 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
YV + E+ L +F ++ G+ D T+VS+ C + +G +H +K
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 56 ----NIEVD-------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
N +D V M+ + V++ T++I A G +A++ F EM+
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE 123
G+ PD T VL C+ L+DE
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDE 415
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 22/131 (16%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------------------ 54
LF+++ G+ D T + + + L ++ G LH +I+K
Sbjct: 182 LFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL 241
Query: 55 KNIEVD----VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVG 110
KN VD V M +DV++ ++I G K L F +M + G++ D T V
Sbjct: 242 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 301
Query: 111 VLVACSHAGLV 121
V C+ + L+
Sbjct: 302 VFAGCADSRLI 312
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/399 (37%), Positives = 222/399 (55%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREV-QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ EAL LF + + K + D+ T+ +L AC L A + G +H YIM+
Sbjct: 322 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 381
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
D + +L KD+++ T +I M G G +A+ F +M+
Sbjct: 382 DRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR 441
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G++ D I+FV +L ACSH+GLVDE FN+M + I P++EHY C+V +L R G +
Sbjct: 442 QAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDL 501
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA I+NMP+ D + G LL CRIH +++ AE+ A+++ EL P+N G YV+++N Y
Sbjct: 502 IKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIY 561
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ + KW++VKR+R+ + +R ++K PGC IE+ G V+ FV
Sbjct: 562 AEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVR 621
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ G+ P L D +E EKE AL H+EKLA+ G++S G +IR+ KNLRVC
Sbjct: 622 ARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCG 681
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH +SK+ RE V+ D NRFH FK+G CSC+ FW
Sbjct: 682 DCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 720
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EA+ LF E++ +G++ D T+ ++L C L+ G +H +I E D
Sbjct: 221 YAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIK----END 276
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+G D+ AL+ + A CG +A F EM+++ D I++ ++ S
Sbjct: 277 LGF-----DIFVSNALMDMYAKCGSMQEAELVFSEMRVK----DIISWNTIIGGYSKNCY 327
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLV 148
+E +S FNL+ E+ P C++
Sbjct: 328 ANEALSLFNLLLEEKRFSPDERTVACVL 355
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 22/145 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
YV + E+ L +F ++ G+ D T+VS+ C + +G +H +K
Sbjct: 120 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 179
Query: 56 ----NIEVD-------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
N +D V M+ + V++ T++I A G +A++ F EM+
Sbjct: 180 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 239
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE 123
G+ PD T VL C+ L+DE
Sbjct: 240 EGISPDVYTVTAVLNCCARYRLLDE 264
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 22/131 (16%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------------------ 54
LF+++ G+ D T + + + L ++ G LH +I+K
Sbjct: 31 LFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL 90
Query: 55 KNIEVD----VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVG 110
KN VD V M +DV++ ++I G K L F +M + G++ D T V
Sbjct: 91 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 150
Query: 111 VLVACSHAGLV 121
V C+ + L+
Sbjct: 151 VFAGCADSRLI 161
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/395 (37%), Positives = 211/395 (53%), Gaps = 46/395 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV E+AL LF +++ + + T + AC LGAL+ G LH ++++ E
Sbjct: 409 YVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEAS 468
Query: 61 VGLGMALK----------------------DVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
G AL D ++ A+I L G G +ALE F +M
Sbjct: 469 NSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVA 528
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD I+F+ +L AC+HAGLVDE +F M +GI P +HY L+ +LGR+GRI
Sbjct: 529 EGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIG 588
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LIK MP + +L CR + ++E AA QL ++P + G+Y++LSN YS
Sbjct: 589 EARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYS 648
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ +W R+R+LM +R +KK PGC IEV +H F+
Sbjct: 649 AAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGA 708
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+VP+ VL DM+ EKE L H+EKLA+ FGL+ PG + ++KNLR+C D
Sbjct: 709 RMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGD 768
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCK 349
CHTA +SK RE VV D RFHHFK+G CSC+
Sbjct: 769 CHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSCE 803
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 224/399 (56%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQ-HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
++ + EAL LF ++Q + D+VTM+S++ A +HLG LE+G W+ +I + + V
Sbjct: 160 FLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGLGV 219
Query: 60 DVGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
V LG MA+++V+T TALI L + G+ +AL F+ M+
Sbjct: 220 SVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGVHGRSTEALAMFHSMR 279
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV+PD +TF GVLVACSH GLV E F + + Y + P ++HYGC+V ILGRAG +
Sbjct: 280 KSGVQPDYVTFSGVLVACSHGGLVKEGWDIFESIRKVYRMDPLLDHYGCMVDILGRAGLL 339
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A + ++ MPM + + LLGAC H+NL AE+ ++ ++ G V+LSN Y
Sbjct: 340 NEAYDFVERMPMKPNSIIWRTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVY 399
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
++ +W + IR M E+ I K PGC I VD +HEFV
Sbjct: 400 GAAGRWVEKASIRSKMREKRIGKEPGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSII 459
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G++ VL D++EEE+E +L+ H+EKLA+ F ++S IRI+KNLR+C
Sbjct: 460 GDLRNRGYMMQTKNVLHDIEEEEREHSLSYHSEKLAVAFAILSMKDKRTIRIMKNLRICY 519
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+ IS + R+ ++ DRNRFHHF+ G CSC D+W
Sbjct: 520 DCHSFMKHISVRFERKIIIRDRNRFHHFEKGLCSCHDYW 558
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 16/130 (12%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKD 69
+L F ++ G+ D T +L AC+ L ++ + LH I+K ++ D
Sbjct: 71 SLFYFFSMRSNGIPLDNFTFPFVLKACSRL---QINLHLHSLIVKYGLD---------SD 118
Query: 70 VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFN 129
+ ALI V CG A++ F EM R D++++ V+ + + G E + F
Sbjct: 119 IFVQNALICVYGYCGSLEMAVKVFDEMSER----DSVSWSTVIASFLNNGYASEALDLFE 174
Query: 130 LMSEKYGIRP 139
M + + P
Sbjct: 175 KMQLEDKVVP 184
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 215/398 (54%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV E+AL LF +++ + + T + AC LGAL+ G LH ++++ E
Sbjct: 407 YVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEAS 466
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
G AL D ++ A+I L G G +ALE F +M
Sbjct: 467 NSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVA 526
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+G+ PD I+F+ +L AC+HAGLVD+ +F M +GI P +HY L+ +LGRAGRI
Sbjct: 527 QGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIG 586
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LIK MP + +L CRI+ ++E AA QL +++P++ G+Y++LSN YS
Sbjct: 587 EARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYS 646
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ +W R+R+LM +R +KK PGC IEV VH F+
Sbjct: 647 AAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGA 706
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+VP+ L DM EKE L H+E+LA++FGL+ G + ++KNL++C D
Sbjct: 707 KMRKLGYVPDTKFALQDMAPHEKEYVLFAHSERLAVSFGLLKLPAGATVTVLKNLKICGD 766
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA +S+ RE VV D RFHHFK+G CSC ++W
Sbjct: 767 CHTAMMFMSRAVGREIVVRDVRRFHHFKDGECSCGNYW 804
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 75/189 (39%), Gaps = 31/189 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLH--------PYI 52
YV+ C EA LFR + K + D+ T SLL AC + G G +H ++
Sbjct: 271 YVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFV 330
Query: 53 MKKNIEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFY 94
+ + V+ L M LKDV++ ++ G + A F
Sbjct: 331 PEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFK 390
Query: 95 EMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRA 154
EM + ++++ ++ H GL ++ + FN M + ++P Y V G
Sbjct: 391 EMPYKS----ELSWMVMVSGYVHGGLAEDALKLFNQMRSE-DVKPCDYTYAGAVAACGEL 445
Query: 155 GRIAKAEEL 163
G + ++L
Sbjct: 446 GALKHGKQL 454
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 144/378 (38%), Positives = 210/378 (55%), Gaps = 47/378 (12%)
Query: 22 LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-------------- 67
L D TM +L AC L ALE G +H YI++ D + AL
Sbjct: 428 LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487
Query: 68 --------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
KD+++ T +I M G GN+A+ F EM+ G++PD ++F+ +L ACSH+G
Sbjct: 488 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547
Query: 120 LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGL 179
L+++ F +M + I P +EHY C+V +L R G ++KA E I+ +P+A D + G L
Sbjct: 548 LLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGAL 607
Query: 180 LGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIK 239
L CR + ++E AE+ A+++ EL P+N G YV+L+N Y+ + KW++VKR+RE + ++ ++
Sbjct: 608 LCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLR 667
Query: 240 KPPGCILIEVDGVVHEFVKA-------------------------GFVPNKSEVLFDMDE 274
K PGC IE+ G V+ FV G P L + DE
Sbjct: 668 KNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADE 727
Query: 275 EEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMD 334
+KE AL H+EKLA+ FGL++ P IR+ KNLRVC DCH +SK RE V+ D
Sbjct: 728 MQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRD 787
Query: 335 RNRFHHFKNGSCSCKDFW 352
NRFHHFK+G CSC+ FW
Sbjct: 788 PNRFHHFKDGYCSCRGFW 805
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 67/144 (46%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV + E L +++++ + G+ D T++S+L+ C + G L +G +H +K + E
Sbjct: 226 YVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERR 285
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ M ++V++ T++I G+ + A++ +M+
Sbjct: 286 INFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEK 345
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
GVK D + +L AC+ +G +D
Sbjct: 346 EGVKLDVVAITSILHACARSGSLD 369
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 19/126 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y D + A+ L ++++ +G+ D V + S+L AC G+L+ G +H YI N+E
Sbjct: 327 YTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNME-- 384
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV----------KPDAITFVG 110
++ AL+ + A CG A F M ++ + KPD+ T
Sbjct: 385 -------SNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMAC 437
Query: 111 VLVACS 116
VL AC+
Sbjct: 438 VLPACA 443
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/399 (37%), Positives = 224/399 (56%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +E++ LF + G D T+VSLL +C+ LGAL+ G WLH Y +++
Sbjct: 265 YDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLN 324
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG +L ++V+T TA+I M G G +A+E F EM+
Sbjct: 325 VVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRA 384
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G +P+ ITFV VL AC+H+GL+D+ F+ M E YG+ P +EH C+V + GRAG +
Sbjct: 385 YGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLN 444
Query: 159 KAEELIKN-MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
A + IK +P V +LGACR+H N + + A+ +L + P+N G YV+LSN Y
Sbjct: 445 DAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIY 504
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ + + +V+ +R +M R +KK G IE++ + F
Sbjct: 505 ALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELM 564
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
++G+VP ++ D++EEE++ AL H+EKLA+ FGL+ G IRI+KNLR+C
Sbjct: 565 CRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICE 624
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+A IS + +RE +V D+ RFHHFK+GSCSC D+W
Sbjct: 625 DCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 663
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 74/185 (40%), Gaps = 31/185 (16%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIM----KKNIEVDVGL- 63
+ +L +R + G T S++ AC L AL +G +H ++M ++ V L
Sbjct: 172 DTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALI 231
Query: 64 -----------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
M + ++ +LI G +++ F+ M G +PD+
Sbjct: 232 ALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSA 291
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKY----GIRPSIEHYGCLVYILGRAGRIAKAEE 162
T V +L +CS G +D F Y G ++ L+ + R G ++KA E
Sbjct: 292 TIVSLLSSCSQLGALD-----FGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKARE 346
Query: 163 LIKNM 167
+ +M
Sbjct: 347 VFDSM 351
>gi|357126224|ref|XP_003564788.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Brachypodium distachyon]
Length = 515
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 150/391 (38%), Positives = 212/391 (54%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+ AL ++R++ G+ D+ + + L +C LE+G +H ++ +E + +G +L
Sbjct: 125 DAALRVYRDMVASGVEPDEYVVAAALSSCAGSTTLELGQSVHATAVRLGLEPFLSVGNSL 184
Query: 68 KDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+ +T TALIV A G+G ++L+ + EM G +PD
Sbjct: 185 VSMYAKTGSLREARKVFDATRLRCPVTWTALIVGYAQNGRGEESLQVYAEMVHSGCRPDY 244
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TF+G+L ACSHAGLVD +HF M +GI P +HY C+V +LGRAGR+ +A EL+
Sbjct: 245 VTFIGLLFACSHAGLVDAGRAHFKSMQADHGITPGPDHYACMVDVLGRAGRLDEAMELLD 304
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
M LD V LLGACR H N E AERAA+ + L P + Y++LSN YS R+W
Sbjct: 305 QSTMKLDATVWKALLGACRTHRNAELAERAAEMVWRLDPTDAVPYIMLSNLYSRERRWSD 364
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEF-----------------------VKA-GF 261
V RIR LM R I K PGC + GV H F V+A GF
Sbjct: 365 VARIRTLMKSRGIAKEPGCSWVVASGVTHLFYVEDRGHPRTDEIYRKVEEMMEKVRAEGF 424
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
V + L D E +E L H+E+LA+ FGL++ G +R+ KNLRVC DCH A +
Sbjct: 425 VADTDWALQDEAPEGREKGLAHHSERLAVAFGLLALPAGAPVRVFKNLRVCGDCHVAIKM 484
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
++KVY RE ++ D N FHH ++G CSC D+W
Sbjct: 485 VAKVYGREIILRDSNCFHHMRDGVCSCGDYW 515
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EE+L ++ E+ H G D VT + LL AC+H G ++ G K+++ D
Sbjct: 219 YAQNGRGEESLQVYAEMVHSGCRPDYVTFIGLLFACSHAGLVDAGR-----AHFKSMQAD 273
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC 115
G+ ++ VL G+ ++A+E + + K DA + +L AC
Sbjct: 274 HGITPGPDH---YACMVDVLGRAGRLDEAMELLDQSTM---KLDATVWKALLGAC 322
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
M +DV+T T+L+ LA G + AL + +M GV+PD L +C+ + + E
Sbjct: 103 MPRRDVVTWTSLLTGLARSGSHDAALRVYRDMVASGVEPDEYVVAAALSSCAGSTTL-EL 161
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+ + + G+ P + LV + + G + +A ++
Sbjct: 162 GQSVHATAVRLGLEPFLSVGNSLVSMYAKTGSLREARKVF 201
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 152/382 (39%), Positives = 216/382 (56%), Gaps = 44/382 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V + + EEAL LF E++ G+ D++ + ++L AC L LE G +H +K
Sbjct: 418 VHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKS------ 471
Query: 62 GLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACS----- 116
GLG +L +L+ + A CG A + F M+I+ D IT+ ++V +
Sbjct: 472 GLGSSLS---VDNSLVSMYAKCGCIEDANKVFDSMEIQ----DVITWTALIVGYAQNGRG 524
Query: 117 --HAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHF 174
HAGLV+ S+F M E YGI+P EHY C++ +LGR+G++ +A+EL+ M + D
Sbjct: 525 RDHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDAT 584
Query: 175 VLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMA 234
V LL ACR+H N+E ERAA L EL P N YV+LSN YS++ KW++ + R LM
Sbjct: 585 VWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMK 644
Query: 235 ERNIKKPPGCILIEVDGVVHEFV------------------------KAGFVPNKSEVLF 270
R + K PGC IE+ VH F+ +AG+VP+ + L
Sbjct: 645 LRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALH 704
Query: 271 DMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRET 330
DMDEE KE L H+EKLA+ FGL++ PG IRI KNLR+C DCHTA +S V++R
Sbjct: 705 DMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHV 764
Query: 331 VVMDRNRFHHFKNGSCSCKDFW 352
++ D N FHHF+ G+CSC D+W
Sbjct: 765 ILRDSNCFHHFREGACSCSDYW 786
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 25/185 (13%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV-------- 59
EEAL LFR + + + D+ T S+L + + + M +H I+K E
Sbjct: 323 EEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNAL 382
Query: 60 --------------DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
DV M KDV++ T+L+ G +AL F EM+I G+ PD
Sbjct: 383 VDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQ 442
Query: 106 ITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
I VL AC+ +++ + H N + K G+ S+ LV + + G I A ++
Sbjct: 443 IVIAAVLSACAELTVLEFGKQVHANFL--KSGLGSSLSVDNSLVSMYAKCGCIEDANKVF 500
Query: 165 KNMPM 169
+M +
Sbjct: 501 DSMEI 505
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 87/199 (43%), Gaps = 34/199 (17%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EAL LF E+Q++G ++ T S+L C+ LE G +H + +K + + + L
Sbjct: 121 EALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLV 180
Query: 69 DVMT-----------------------LTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D+ TA++ + G G+KA+E F +M+ G++ +
Sbjct: 181 DMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQ 240
Query: 106 ITFVGVLVAC---SHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE 162
TF +L AC S G + H ++ +G + LV + + G ++ A
Sbjct: 241 FTFPSILTACGSISACGFGAQ--VHGCIVRSGFGANVFVG--SALVDMYSKCGDLSNARR 296
Query: 163 LIKNM----PMALDHFVLG 177
+++ M P++ + ++G
Sbjct: 297 MLETMEVDDPVSWNSMIVG 315
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 63/131 (48%), Gaps = 13/131 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +A+ FR+++ +G+ ++ T S+L AC + A G +H I++ +
Sbjct: 215 YSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGAN 274
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
V +G AL D+ + CG + A M++ D +++ ++V C GL
Sbjct: 275 VFVGSALVDMYS---------KCGDLSNARRMLETMEV----DDPVSWNSMIVGCVRQGL 321
Query: 121 VDERISHFNLM 131
+E +S F +M
Sbjct: 322 GEEALSLFRIM 332
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 153/398 (38%), Positives = 219/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV +EAL +FR +Q G+ D TM+ +L AC+HL AL+ G H Y++ + D
Sbjct: 248 YVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATD 307
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL D+++ A+I+ + G G +AL F+++
Sbjct: 308 TLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLA 367
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD ITF+ +L +CSH+GLV E F+ MS + I P +EH C+V ILGRAG I
Sbjct: 368 LGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLID 427
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A I+NMP D + LL ACRIH N+E E ++++ L P++ G++V+LSN YS
Sbjct: 428 EAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYS 487
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ +W IR + +KK PGC IE++G+VH FV
Sbjct: 488 AAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLV 547
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G+ S V D++EEEKE L H+EKLAI FG+++ G I + KNLRVC D
Sbjct: 548 EMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGD 607
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA ++ + RE V D NRFHHFKNG+C+C DFW
Sbjct: 608 CHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 645
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 22/138 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + A+ L+ + H G+ +K T +L AC+ L A+E G+ +H + +E D
Sbjct: 84 YAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESD 143
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL +DV+ A+I ++ G + A++ +MQ
Sbjct: 144 VFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQE 203
Query: 99 RGVKPDAITFVGVLVACS 116
G+ P++ T VGVL C
Sbjct: 204 EGICPNSSTIVGVLPTCQ 221
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 150/395 (37%), Positives = 221/395 (55%), Gaps = 43/395 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVG-----------MWLH 49
Y ++ L L+R+++ G+ D VT+V +L +C HLGA G +
Sbjct: 235 YAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFN 294
Query: 50 PYIMKKNIEV-----------DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
P++ I + + GM K+V++ TA+I M GQG A++ F EM
Sbjct: 295 PFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMIS 354
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
PD FV VL ACSHAGL ++ + +F M YG++P EHY C+V +LGRAGR+
Sbjct: 355 SDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLE 414
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI +M + D V G LLGAC+IH N+E AE A ++++E P N G YV+LSN +S
Sbjct: 415 EARKLIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFS 474
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLF-------- 270
+ + + R+R +M ER +KK PGC +E G +H F+ +++ ++
Sbjct: 475 EAGNMEGILRVRVMMRERKLKKEPGCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLDGLED 534
Query: 271 ---------DMDEEEKE----TALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHT 317
D D+E + T + +H+EKLAI FGL++ PG I +IKNLRVC DCH
Sbjct: 535 IIKRRGGSNDNDQESRNEELITGMGVHSEKLAIAFGLINTEPGTEITVIKNLRVCGDCHL 594
Query: 318 ATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
++S++ +R+ VV D RFHHFKNG CSCKD+W
Sbjct: 595 FLKLVSEIVDRQLVVRDATRFHHFKNGVCSCKDYW 629
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 35/195 (17%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y +S +A+LLFR+++ +G++ + VTM+ L+ C L G LH ++ ++ D
Sbjct: 134 YSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGD 193
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G M K ++T A+I A G L+ + +M+
Sbjct: 194 LSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEF 253
Query: 99 RGVKPDAITFVGVLVACSHAGL------VDERISHFNLMSEKYGIRPSIEHYGCLVYILG 152
G+ PD +T VGVL +C+H G V++RI +G P +++ L+ +
Sbjct: 254 TGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIE-----LSGFGFNPFLKN--ALINMYA 306
Query: 153 RAGRIAKAEELIKNM 167
R G + KA + M
Sbjct: 307 RCGNLVKARAIFDGM 321
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/393 (39%), Positives = 222/393 (56%), Gaps = 48/393 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEAL LFR +Q +G+ + VT S+L A + L AL+ G +H ++++ + V L +L
Sbjct: 242 EEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSL 301
Query: 68 KD----------------------VMTLTALIVVLAMCGQGNKALEYFYEM-QIRGVKPD 104
D V++ A++V + G+G + LE F M VKPD
Sbjct: 302 IDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPD 361
Query: 105 AITFVGVLVACSHAGLVDERISHF-NLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
++T + VL CSH GL D+ + F ++ S K ++P +HYGC+V +LGRAGR+ A E
Sbjct: 362 SVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEF 421
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
+K MP + G LLGAC +H NL+ E QLL++ P+N G+YVILSN Y+S+ +W
Sbjct: 422 VKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRW 481
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVH------------------------EFVKA 259
+ V+ +R LM ++ + K PG IE+D V+H F +A
Sbjct: 482 EDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARFKEA 541
Query: 260 GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
G+VP+ S VL D+DEE+KE L H+EKLA+TFGL++ V IR+IKNLR+C DCH
Sbjct: 542 GYVPDLSCVLHDVDEEQKEKILLSHSEKLALTFGLIATPESVPIRVIKNLRICVDCHNFA 601
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SK+Y RE + D+NRFH G CSC D+W
Sbjct: 602 KYTSKIYGREVSLRDKNRFHRIVGGKCSCGDYW 634
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +AL LF ++ G ++ T ++L +C +G +H +I+K N E
Sbjct: 134 YSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAH 193
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G +L +DV++ TA+I A G +ALE F +Q
Sbjct: 194 VYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQR 253
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
G++ + +T+ VL A S +D
Sbjct: 254 EGMQSNYVTYTSVLTALSGLAALD 277
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC-SHAGLVDE 123
M ++V++ TA+I + G ++AL F +M G +P+ TF VL +C +G V
Sbjct: 119 MPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLG 178
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
R H +++ Y + L+ + + G+I +A + + +P
Sbjct: 179 RQIHSHIIKLNYEAHVYVG--SSLLDMYAKDGKIHEARGIFQCLP 221
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 143/398 (35%), Positives = 228/398 (57%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YVE E+AL F +++ +G+ ++ T SL+ AC + LE G LH ++K N + D
Sbjct: 354 YVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRD 413
Query: 61 VGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L D+ + L+ V + G G A+E F M
Sbjct: 414 PFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIH 473
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
RG+KP+A+TFV +L CSHAG+V++ +++F+ M + YG+ P EHY C++ +LGRAG++
Sbjct: 474 RGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLK 533
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE+ I NMP + F LGAC+IH ++E A+ AA +L++L P+N G++V+LSN Y+
Sbjct: 534 EAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYA 593
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEV------------------------DGVVH 254
++W+ V+ +R+++ + N+ K PG +++ D ++
Sbjct: 594 KEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLD 653
Query: 255 EFVKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ + G+VP VL DMD+ KE L+ H+E++A+ F L++ G+ I + KNLRVC+D
Sbjct: 654 QIKRIGYVPQTESVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSD 713
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A ISKV R +V D +RFHHF NGSCSC D+W
Sbjct: 714 CHSALKFISKVTERNIIVRDISRFHHFSNGSCSCGDYW 751
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 29/174 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V++ ++AL + ++ + D+ + S L AC+ L A G LH I+K E +
Sbjct: 252 FVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYE 311
Query: 61 VGLGMALKD-----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+G AL D +++LTA+I Q KAL F +++
Sbjct: 312 TFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLR 371
Query: 98 IRGVKPDAITFVGVLVACS------HAGLVDERISHFNLMSEKYGIRPSIEHYG 145
RG++P+ TF ++ AC+ H + ++ FN + + ++ YG
Sbjct: 372 RRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYG 425
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 57/138 (41%), Gaps = 22/138 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ +S +EAL F +++ +G + + S+L ACT LGA++ G +H ++K +
Sbjct: 151 FAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCE 210
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G M KD + T++I G KAL + +M
Sbjct: 211 LFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVT 270
Query: 99 RGVKPDAITFVGVLVACS 116
V D L ACS
Sbjct: 271 DDVFIDQHVLCSTLSACS 288
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 149/399 (37%), Positives = 221/399 (55%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ ++A+ LFR + +G + T+ ++L + L +L+ G +H +
Sbjct: 387 YVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASS 446
Query: 61 VGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
V + AL +D +T T++I+ LA G G +AL F M
Sbjct: 447 VSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERML 506
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G+KPD IT+VGVL AC+H GLV++ S++NLM + I P+ HY C++ + GRAG +
Sbjct: 507 ENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLL 566
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A I+NMP+ D G LL +C++H N+E AE AA++LL + P+N G+Y L+N Y
Sbjct: 567 QEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVY 626
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVH----------------------- 254
S+ +W+ IR+ M ++ +KK G +++ VH
Sbjct: 627 SACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIW 686
Query: 255 -EFVKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
E K GFVP+ VL D++EE KE L+ H+EKLAI FGL+ +RI+KNLRVCN
Sbjct: 687 KEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLICTPENTTLRIMKNLRVCN 746
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+A ISK+ RE +V D RFHHFKNG CSC+D+W
Sbjct: 747 DCHSAIKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/397 (37%), Positives = 226/397 (56%), Gaps = 47/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
++ + E+A+ LF +Q + + D T+VS++ A + W+H Y ++ +++ DV
Sbjct: 505 TQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDV 564
Query: 62 GLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ AL D V+T A+I G G A+E F EM+
Sbjct: 565 YVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSS 624
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G P+ TF+ VL ACSHAGLVDE +F+ M E YG+ P +EHYG +V +LGRAG++ +
Sbjct: 625 GKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHE 684
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A I+ MPM V G +LGAC++H N+E AE +AQ++ EL P+ G +V+L+N Y++
Sbjct: 685 AWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYAN 744
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF----------------------- 256
+ WK V R+R M ++ ++K PG ++++ +H F
Sbjct: 745 ASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEE 804
Query: 257 VKA-GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+KA G+VP+ ++ + D++++ K LN H+EKLAI +GL+ PG I+I KNLRVC DC
Sbjct: 805 IKAVGYVPD-TDSIHDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCKDC 863
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H AT +IS V RE ++ D RFHHFK+G CSC D+W
Sbjct: 864 HNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 900
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 22/136 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E+ EAL LF+ + +G+ V++++ L AC LG L+ G +H +++ +E +
Sbjct: 403 YAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESN 462
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL K ++ A+I+ G A+ F MQ+
Sbjct: 463 VNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQL 522
Query: 99 RGVKPDAITFVGVLVA 114
VKPD+ T V ++ A
Sbjct: 523 ENVKPDSFTLVSIIPA 538
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 23/146 (15%)
Query: 1 YVEDSACEEAL-LLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y + E A+ ++ R + G D VT+VS+L AC AL +H + ++ +
Sbjct: 301 YARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDE 360
Query: 60 DVGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQ 97
V + A+ DV ++ A+I A G +AL F M
Sbjct: 361 QVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMV 420
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDE 123
GV ++ + L AC G +DE
Sbjct: 421 GEGVDVTDVSVLAALHACGELGFLDE 446
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/399 (37%), Positives = 224/399 (56%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +E++ LF + G D T+VSLL +C+ LGAL+ G WLH Y +++
Sbjct: 201 YDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLN 260
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG +L ++V+T TA+I M G G +A+E F EM+
Sbjct: 261 VVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRA 320
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G +P+ ITFV VL AC+H+GL+D+ F+ M E YG+ P +EH C+V + GRAG +
Sbjct: 321 YGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLN 380
Query: 159 KAEELIKN-MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
A + IK +P V +LGACR+H N + + A+ +L + P+N G YV+LSN Y
Sbjct: 381 DAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIY 440
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ + + +V+ +R +M R +KK G IE++ + F
Sbjct: 441 ALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELM 500
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
++G+VP ++ D++EEE++ AL H+EKLA+ FGL+ G IRI+KNLR+C
Sbjct: 501 CRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICE 560
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+A IS + +RE +V D+ RFHHFK+GSCSC D+W
Sbjct: 561 DCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 599
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 74/185 (40%), Gaps = 31/185 (16%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIM----KKNIEVDVGL- 63
+ +L +R + G T S++ AC L AL +G +H ++M ++ V L
Sbjct: 108 DTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALI 167
Query: 64 -----------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
M + ++ +LI G +++ F+ M G +PD+
Sbjct: 168 ALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSA 227
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKY----GIRPSIEHYGCLVYILGRAGRIAKAEE 162
T V +L +CS G +D F Y G ++ L+ + R G ++KA E
Sbjct: 228 TIVSLLSSCSQLGALD-----FGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKARE 282
Query: 163 LIKNM 167
+ +M
Sbjct: 283 VFDSM 287
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 153/399 (38%), Positives = 220/399 (55%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
YV++S ++AL +F+ V+ + + T+ S+LL C++L AL G +H + MK +
Sbjct: 212 YVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSR 271
Query: 60 DVGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+V +G M+ KD++ A+I A G G +A++ F +M+
Sbjct: 272 NVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMK 331
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV PD IT + VL AC H GL D I F M E Y I P I+HY C+V +L RAG +
Sbjct: 332 DEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLL 391
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A +I +MP G LL ACR++ NLE AE AA++L+E P N G+YV L+N Y
Sbjct: 392 ERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIY 451
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF--------------------- 256
+ + KW V R+R M + + K PG +E+ GV HEF
Sbjct: 452 AVANKWADVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLGLIHDKLDRLQ 511
Query: 257 --VKA-GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+KA G+VP+ L D+++ K L H+EKLAI FGL+S PG+ +RI KNLR+C
Sbjct: 512 MLMKAMGYVPDLDFALHDVEDSLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLRICG 571
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A +ISK+ +RE ++ D RFHHF+ G CSC D+W
Sbjct: 572 DCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 610
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 224/398 (56%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL F E+Q + + D TMVS++ A L W+H ++++ ++ +
Sbjct: 308 YAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKN 367
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL D V+T A+I G G ++E F EM+
Sbjct: 368 VFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKK 427
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+KP+ ITF+ L ACSH+GLV+E + F M + YGI P+++HYG +V +LGRAGR+
Sbjct: 428 GTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLN 487
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I+ MP+ V G +LGAC+IH N++ E+AA ++ +L PD+GG +V+L+N Y+
Sbjct: 488 QAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYA 547
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
++ W KV ++R +M + ++K PGC L+E+ VH F
Sbjct: 548 TASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETLVD 607
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VP+ + + D++++ K LN H+EKLAI FGL++ G I I KNLRVC D
Sbjct: 608 EIRAAGYVPDTNSI-HDVEDDVKVQLLNTHSEKLAIAFGLLNTSTGTPIHIRKNLRVCGD 666
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT IS V RE +V D +RFH FK+G CSC D+W
Sbjct: 667 CHNATKYISLVTGREIIVRDMHRFHLFKDGVCSCGDYW 704
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 22/136 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ E A+L+F+++ +G+ VT++ L AC LG LE G ++H + + ++ D
Sbjct: 207 YVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSD 266
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + +L K +++ A+I+ A G N+AL F EMQ
Sbjct: 267 VSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQS 326
Query: 99 RGVKPDAITFVGVLVA 114
R +KPD+ T V V+ A
Sbjct: 327 RNIKPDSFTMVSVIPA 342
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 23/189 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ + AL+L + +G D +T+VS+L A L +GM +H Y+++ E
Sbjct: 106 YAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESL 165
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL D V++ ++I G A+ F +M
Sbjct: 166 VNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLD 225
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+P +T +G L AC+ G + ER + + ++ + + L+ + + R+
Sbjct: 226 EGVQPTNVTVMGALHACADLGDL-ERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVD 284
Query: 159 KAEELIKNM 167
A ++ KN+
Sbjct: 285 IAADIFKNL 293
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 159/384 (41%), Positives = 223/384 (58%), Gaps = 47/384 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------ 54
+ E+ EEAL L+ E+ KG+ D T+VSLL AC +GAL +G +H Y++K
Sbjct: 197 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 256
Query: 55 ---KNIEVDVGL-------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ- 97
N+ +D+ M K+ ++ T+LIV LA+ G G +A+E F M+
Sbjct: 257 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 316
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G+ P ITFVG+L ACSH G+V E +F M E+Y I P IEH+GC+V +L RAG++
Sbjct: 317 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 376
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA E IK+MPM + + LLGAC +H + + AE A Q+L+L P++ G YV+LSN Y
Sbjct: 377 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMY 436
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+S ++W V++IR+ M +KK PG L+EV VHEF+
Sbjct: 437 ASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMT 496
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+VP S V D++EEEKE A+ H+EK+AI F L+S I ++KNLRVC
Sbjct: 497 GRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCA 556
Query: 314 DCHTATNIISKVYNRETVVMDRNR 337
DCH A ++SKVYNRE VV DR+R
Sbjct: 557 DCHLAIKLVSKVYNREIVVRDRSR 580
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 28/192 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLT-GDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN--- 56
Y E A L+RE++ GL D T L+ A T + + +G +H +++
Sbjct: 95 YAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGS 154
Query: 57 -IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
I V L M KD++ ++I A G+ +AL + EM
Sbjct: 155 LIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMN 214
Query: 98 IRGVKPDAITFVGVLVACSHAGLVD--ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
+G+KPD T V +L AC+ G + +R+ + + K G+ ++ L+ + R G
Sbjct: 215 SKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI---KVGLTRNLHSSNVLLDLYARCG 271
Query: 156 RIAKAEELIKNM 167
R+ +A+ L M
Sbjct: 272 RVEEAKTLFDEM 283
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 150/397 (37%), Positives = 226/397 (56%), Gaps = 45/397 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV- 59
+ ++S +E L L++ ++ D+ T+ S+L ACT L LE+G +H +++K + ++
Sbjct: 190 FAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDLI 249
Query: 60 ----------------DVGL----GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
D L M KDV++ + +I LA G AL+ F M+ +
Sbjct: 250 LNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSK 309
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G KP+ IT +GVL ACSHAGLV++ +F M E +GI P EHYGC++ +LGRAG++ +
Sbjct: 310 GPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDE 369
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A +LI M D LLGACR+H N++ A AA+++L+L P + G+Y++LSN Y++
Sbjct: 370 AVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYAN 429
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
S+KW+ V +R M R +KK PGC IEV VH F+
Sbjct: 430 SQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQR 489
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+ G+VP+ + VL D++ E+ E +L H+EKLAI FGL+S I I KNLR+C DC
Sbjct: 490 LMRLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRICGDC 549
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H ++S++ NR V+ D R+HHF+ G CSC D+W
Sbjct: 550 HIFAKLVSQLENRVIVIRDPIRYHHFRGGVCSCGDYW 586
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 27/175 (15%)
Query: 16 EVQHKG-LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK-------------NIEVDV 61
E H+ L+ D +T L+ C GA++ +H ++ N+ V
Sbjct: 5 EAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKF 64
Query: 62 GL---------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVL 112
GL M ++V++ T +I + +KAL++ M GV+P+ T+ VL
Sbjct: 65 GLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVL 124
Query: 113 VACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
AC GL++ R H +++ K G+ + L+ + G A + M
Sbjct: 125 RACD--GLLNLRQLHGSIL--KVGLESDVFVRSALIDTYSKLGEQHDALNVFNEM 175
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 215/398 (54%), Gaps = 49/398 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EA+LLFR++Q +G+ DK+T + L + G H + ++ D
Sbjct: 714 YAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSD 773
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + L V+ L A+I LA G +A++ F++MQ
Sbjct: 774 VSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQ 833
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+PD T V ++ AC HAG+V+E S F M E +GI P++EHY C V +LGRAG++
Sbjct: 834 EGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLE 893
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
AE++I+ MP + V LLG C++ + E ER AQ++LEL P N ++V+LSN Y
Sbjct: 894 HAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYC 953
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ KWK R+ M + N+K PG E+ VHEFV
Sbjct: 954 ATGKWKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKLEL 1013
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+ +K D+++E KE AL H+E++AI FGL++ P ++I+KNLRVC D
Sbjct: 1014 LMRRAGYEADKG---LDVEDELKEKALGYHSERIAIAFGLIATPPETTLKIVKNLRVCGD 1070
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTAT IS V RE +V D RFHHF NG+CSCKD W
Sbjct: 1071 CHTATKYISMVMGREIIVRDSLRFHHFSNGTCSCKDCW 1108
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 28/204 (13%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----- 67
LFR +Q +G+ DK T+ + L C L +G +H + + +E D+ + AL
Sbjct: 625 LFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYS 684
Query: 68 -----------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVG 110
+D+++ + A G +A+ F +MQ+ GVKPD +TF
Sbjct: 685 NCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFST 744
Query: 111 VLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMA 170
L + LV + F+ ++ + G+ + LV + + G++ +A L + A
Sbjct: 745 TLNVSGGSALVSDG-KLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRG---A 800
Query: 171 LDHFV--LGGLLGACRIHDNLEAA 192
D V L ++GA H E A
Sbjct: 801 CDWTVVLLNAIIGALAQHGFSEEA 824
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 57/299 (19%), Positives = 123/299 (41%), Gaps = 38/299 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD-------- 60
+AL +FRE+ + L + +T ++ L ACT +L G WLH + + ++ D
Sbjct: 216 DALRIFREMLLQPLAPNVITFITALGACT---SLRDGTWLHSLLHEASLGFDPLASNALI 272
Query: 61 --------------VGLGMALK---DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
V MA + D+++ A+I G+ A+ F +++ G++P
Sbjct: 273 NMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRP 332
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
+++T + +L A + +G+ F+ + G + ++ + + G + A +
Sbjct: 333 NSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAV 392
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNL-EAAERAAQQLLELLPDNGGSYVILSNRYSSSRK 222
+ + D +LGA + + LL + N S++ + N S+S
Sbjct: 393 FRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEA 452
Query: 223 WKKVKRIRELMAERN---IKKPPGCILIEVDGVVHEFVKAGFV------PNKSEVLFDM 272
++I L+ R ++ +L+ + G +A V P++S V +++
Sbjct: 453 LDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNV 511
>gi|45935146|gb|AAS79604.1| putative pentatricopeptide repeat-containing protein [Ipomoea
trifida]
gi|118562903|dbj|BAF37793.1| hypothetical protein [Ipomoea trifida]
Length = 575
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 155/400 (38%), Positives = 224/400 (56%), Gaps = 49/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V++ EA+ LF + G+ ++VT+ S+L AC GAL G +H ++ +KN +
Sbjct: 177 FVDNDRPIEAIRLFTHMIENGIEPNEVTVASVLRACADTGALNTGERIHSFVKEKNFSSN 236
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL KDV TA+I LA G KA+E+F M+
Sbjct: 237 ANVSTALIDMYAKCGCIDGALEVFDETLEKDVYVWTAIIAGLASHGLCMKAIEFFENMKK 296
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
VK D VL A +AGLV E + F + +K+ I+P+I+HYGC+V +L RAGR+
Sbjct: 297 SDVKMDERAITAVLSAYRNAGLVSEGLLFFRRL-KKHKIKPTIQHYGCVVDMLTRAGRLK 355
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQL--LELLPDNGGSYVILSNR 216
AEE I+ MP+ D + L+ C+I ++E +ER ++L L + + GSYV+L N
Sbjct: 356 DAEEFIRKMPIEPDAVLWRTLIWGCKILGDVERSERLVRELELLNMDSRDTGSYVLLENV 415
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA----------------- 259
Y+++ KW++ + RELM +R + KPP C IE+DGVVHEF
Sbjct: 416 YAATGKWEEKAKTRELMYQRGLMKPPACSRIEIDGVVHEFTAGDSRHDEATAVYEKLEDV 475
Query: 260 -------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
G+ P SEVL ++D++EK + L H+EKLA++FGLV PG +IRI+KNLR C
Sbjct: 476 EERLRGEGYNPIVSEVLLEIDDDEKASQLLHHSEKLAVSFGLVKSSPGSVIRIVKNLRSC 535
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+ +ISKVY R+ +V DR RFHHF G+CSC D W
Sbjct: 536 EDCHSFMKLISKVYQRDIIVRDRIRFHHFSGGNCSCGDRW 575
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 277 bits (709), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 147/403 (36%), Positives = 224/403 (55%), Gaps = 51/403 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI--- 57
Y++++ EA+ L+ ++ G D V++ S+L AC AL +G +H YI +K +
Sbjct: 284 YMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPN 343
Query: 58 -------------------EVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
DV M +DV++ TA+I G+G A+ F ++Q
Sbjct: 344 LLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQD 403
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD+I FV L ACSHAGL++E S F LM++ Y I P +EH C+V +LGRAG++
Sbjct: 404 SGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVK 463
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A I++M M + V G LLGACR+H + + AA +L +L P+ G YV+LSN Y+
Sbjct: 464 EAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYA 523
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ +W++V IR +M + +KK PG +EV+ ++H F+
Sbjct: 524 KAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVK 583
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPM-----PGVLIRIIKNL 309
+ G+VP+ L D++EE+KET L +H+EKLAI F L++ IRI KNL
Sbjct: 584 KMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNL 643
Query: 310 RVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
R+C DCH A +IS++ +RE ++ D NRFH F+ G CSC D+W
Sbjct: 644 RICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ ++AL + RE++ ++ D TM SLL A ++ V M++ D
Sbjct: 216 YAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV-MYVK----------D 264
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC--SHA 118
+ M K +++ +I V +A+E + M+ G +PDA++ VL AC + A
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324
Query: 119 GLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ ++I + E+ + P++ L+ + + G + KA ++ +NM
Sbjct: 325 LSLGKKIHGY---IERKKLIPNLLLENALIDMYAKCGCLEKARDVFENM 370
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 277 bits (709), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 149/391 (38%), Positives = 211/391 (53%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI--MKKNIEVDVG--- 62
E+AL LF +++ G + + AC+ LGALE G LH I + + + VG
Sbjct: 407 EQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAM 466
Query: 63 -----------------LGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
L M D ++ ++I L G G KA+E + +M G+ PD
Sbjct: 467 ITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDR 526
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
TF+ VL ACSHAGLV+E +FN M E YGI P +HY ++ + RAG+ + A+ +I
Sbjct: 527 RTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVID 586
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MP + LL CR H N++ AA++L +L+P + G+YV+LSN Y+S +W
Sbjct: 587 SMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWND 646
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
V R R+LM +R +KK P C EV+ VH F+ K G+
Sbjct: 647 VARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGY 706
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
+P+ VL DM+ E KE AL+ H+EKLA+ FGL+ G +R+ KNLR+C DCH A
Sbjct: 707 IPDTKYVLHDMESEHKEYALSTHSEKLAVAFGLMKLPQGATVRVFKNLRICGDCHNAIKF 766
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+SKV RE VV D RFHHFKNG CSC+++W
Sbjct: 767 MSKVVGREIVVRDGKRFHHFKNGECSCRNYW 797
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 17/209 (8%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ E+AL LFR+++ G+ D+ T S++ AC G +G +H YI+K + D
Sbjct: 264 YLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPD 323
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+++ + LI + G+ + A + FYEM ++ D IT+ +L +AG
Sbjct: 324 RDFLLSVGNT-----LITLYWKYGKVDGARKIFYEMPVK----DIITWNTLLSGYVNAGR 374
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPM---ALDHFVLG 177
++E S F M EK ++ + ++ L + G +A +L M + + +
Sbjct: 375 MEEAKSFFAQMPEK-----NLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFA 429
Query: 178 GLLGACRIHDNLEAAERAAQQLLELLPDN 206
G + AC + LE + Q++ L D+
Sbjct: 430 GAITACSVLGALENGRQLHAQIVHLGHDS 458
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG-LVDE 123
M K+++T T +I LA G G +AL+ F +M++ G +P+ F G + ACS G L +
Sbjct: 385 MPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENG 444
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGAC 183
R H ++ G ++ ++ + R G + A + MP +D ++ A
Sbjct: 445 RQLHAQIV--HLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPF-VDPVSWNSMIAAL 501
Query: 184 RIHDN-LEAAERAAQQLLE-LLPDNGGSYVILS 214
H + ++A E Q L E +LPD +LS
Sbjct: 502 GQHGHGVKAIELYEQMLKEGILPDRRTFLTVLS 534
>gi|115469684|ref|NP_001058441.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|53791823|dbj|BAD53889.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|53792844|dbj|BAD53877.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113596481|dbj|BAF20355.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|125598347|gb|EAZ38127.1| hypothetical protein OsJ_22476 [Oryza sativa Japonica Group]
Length = 648
Score = 277 bits (709), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 155/400 (38%), Positives = 231/400 (57%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----KN 56
Y +++ +AL +F + G+ D+V++ + AC LGAL W+ + N
Sbjct: 249 YAQNAMPVKALEVFDRMAELGMVIDEVSLTGAISACAQLGALRRAAWVQEIAERTGFGNN 308
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ V GL GM K+V T +++I LA G+ ++A+ F EM
Sbjct: 309 VVVGSGLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIAGLASHGRASEAIALFKEMVN 368
Query: 99 RG-VKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
R V+P+ +TF+GVL ACSHAG+V E +F M +KYGI PS +HY C+V +LGRAG +
Sbjct: 369 RANVEPNHVTFIGVLTACSHAGMVGEGRYYFAQMKDKYGIMPSADHYACMVDLLGRAGLV 428
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A +L+++M + V G LLGACRIH E A+ A+ L +L P++ G+YV+LSN
Sbjct: 429 DEALDLVRSMSVTPHGGVWGALLGACRIHGKSEIAKVVAEHLFKLEPESIGNYVLLSNIL 488
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIE-VDGVVHEFVKA----------------- 259
+S+ KW++V ++R LM ++ +KK P L E DG+VH+F
Sbjct: 489 ASAGKWEEVSKVRILMRKQRLKKDPAVSLFEGRDGLVHQFFAGDNAHPRTHEIKKALLEL 548
Query: 260 -------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
G+VP S +++D+++EEKE L H+EKLA++FGL++ G IRIIKNLR+C
Sbjct: 549 VAKLKLEGYVPILSSIVYDVNDEEKERLLMGHSEKLALSFGLLTLGSGCTIRIIKNLRIC 608
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+DCH ++S+V + E +V D RFHHFKNG CSC FW
Sbjct: 609 DDCHLFMQLVSRVESVEIIVRDNMRFHHFKNGECSCGGFW 648
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 277 bits (709), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 146/399 (36%), Positives = 225/399 (56%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +AL+LFR + +G + T+ ++L + L +L+ G LH ++
Sbjct: 387 YAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSS 446
Query: 61 VGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
V +G AL +D +T T++I+ LA G GN+A+E F +M
Sbjct: 447 VSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKML 506
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+KPD IT+VGVL AC+H GLV++ S+FNLM + I P+ HY C++ +LGRAG +
Sbjct: 507 RINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLL 566
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A I+NMP+ D G LL +CR+H ++ A+ AA++LL + P+N G+Y+ L+N
Sbjct: 567 EEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTL 626
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVH----------------------- 254
S+ KW+ ++R+ M ++ +KK G +++ VH
Sbjct: 627 SACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIW 686
Query: 255 -EFVKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
E K GF+P+ + VL D+++E KE L H+EKLAI F L++ +RI+KNLRVCN
Sbjct: 687 KEIKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALINTPKHTTVRIMKNLRVCN 746
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+A IS + RE +V D RFHHFK+GSCSC+D+W
Sbjct: 747 DCHSAIRYISLLVEREIIVRDATRFHHFKDGSCSCQDYW 785
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 113/269 (42%), Gaps = 30/269 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+ A+ F + G++ + T ++L +C AL+VG +H +++K LG +
Sbjct: 127 KSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVK--------LGQS- 177
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISH 127
V +L+ + A CG A F M+++ D T+ ++ D ++
Sbjct: 178 GVVPVANSLLNMYAKCGDSVMAKVVFDRMRLK----DTSTWNTMISMHMQFCQFDLALAL 233
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE----LIKNMPMALDHFVLGGLLGAC 183
F+ M++ P I + ++ G +A E ++K+ + D F LG +L AC
Sbjct: 234 FDQMTD-----PDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSAC 288
Query: 184 RIHDNLEAAERAAQQLLELLPDNGGSY-VILSNRYSSSRKWKKVKRIRELMAERNIKKPP 242
++L+ ++ ++ D G+ L + Y+ S + RI E I P
Sbjct: 289 ANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVE------ITGTP 342
Query: 243 GCILIEVDGVVHEFVKAGFVPNKSEVLFD 271
+I ++ + K G + + + +FD
Sbjct: 343 SLNVIAFTSLLDGYFKIGDI-DPARAIFD 370
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 155/335 (46%), Positives = 207/335 (61%), Gaps = 27/335 (8%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y ++ +EAL LFR++Q + + VT VS+L AC +LGAL++G W+H YI KK
Sbjct: 340 YSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLT 399
Query: 56 ----------------NIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
NIE V GM K + + A+I LAM G N ALE F +M+
Sbjct: 400 NTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMR 459
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G +PD ITFVGVL ACSHAGLV+ F+ M E Y I P ++HYGC++ +LGRAG
Sbjct: 460 DEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLF 519
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+AE L+KNM M D + G LLGACR+H N+E E AA+ L EL P+N G+YV+LSN Y
Sbjct: 520 DEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIY 579
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGC--ILIEVDGVVHEFVKAGFVPNKSEVLFDMDEE 275
+++ +W V RIR + ++ +KK +L E+D E + G VP+ SEVL+DMDEE
Sbjct: 580 ATAGRWDDVARIRTKLNDKGMKKXQDIYKMLDEIDQSFGE--RPGXVPDTSEVLYDMDEE 637
Query: 276 EKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLR 310
KE +L+ H+EKLAI FGL+S P IRI+KNLR
Sbjct: 638 WKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLR 672
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 22/189 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI----MKKN 56
Y + EEAL F+E++ + ++ TMV++L AC G+LE+G W+ +I + N
Sbjct: 239 YAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSN 298
Query: 57 IEV------------------DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + D+ G+ KD+++ +I + +AL F +MQ
Sbjct: 299 LRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQ 358
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V+P+ +TFV +L AC++ G +D + +K+ + + L+ + + G I
Sbjct: 359 SNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIE 418
Query: 159 KAEELIKNM 167
A+++ M
Sbjct: 419 AAKQVFAGM 427
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
+ ++D ++ A+I A G+ +AL +F EM+ V P+ T V VL AC+ +G + E
Sbjct: 224 IPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSL-EL 282
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ E +G+ ++ L+ + + G + KA +L + +
Sbjct: 283 GNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGI 325
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 277 bits (708), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 144/390 (36%), Positives = 219/390 (56%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL FR++ G+ ++ + +L AC+ + AL +G +H + +K ++ D + AL
Sbjct: 586 EALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALI 645
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
KD +I + G G KA+E F MQ +G +PD+
Sbjct: 646 DMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSF 705
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF+GVL+AC+HAGLV E + + M YG++P +EHY C+V +LGRAG++ +A +L+
Sbjct: 706 TFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNE 765
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP D + LL +CR + +LE E +++LLEL P+ +YV+LSN Y+ KW +V
Sbjct: 766 MPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEV 825
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGFV 262
+++R+ M E + K GC IE+ G+V+ F+ K G+
Sbjct: 826 RKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYK 885
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ S VL +++EE K L H+EKLAI+FGL++ G +R+ KNLR+C DCH A ++
Sbjct: 886 PDTSCVLHELEEEGKIKILKSHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLV 945
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SKV R+ +V D RFHHFKNG C+C DFW
Sbjct: 946 SKVVKRDIIVRDNKRFHHFKNGLCTCGDFW 975
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 22/131 (16%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
++L LF + G+ D+ T+ SLLLAC L L G +H ++++ +E+D +G++L
Sbjct: 485 KSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLM 544
Query: 69 DV------MTLTALI-------------VVLAMCGQGN---KALEYFYEMQIRGVKPDAI 106
+ M L LI V++ Q +AL+ F +M G+KP I
Sbjct: 545 SLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEI 604
Query: 107 TFVGVLVACSH 117
GVL ACS
Sbjct: 605 AVTGVLGACSQ 615
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 16/144 (11%)
Query: 1 YVEDSACEEALLLFREV-QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ +A+ LF E+ L D T+ + AC + +E+G +H +K
Sbjct: 169 YSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAG--- 225
Query: 60 DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
D ALI + CG A++ F M+ R + +++ V+ ACS G
Sbjct: 226 ------GFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNL----VSWNSVMYACSENG 275
Query: 120 LVDERISHFN--LMSEKYGIRPSI 141
E F L+SE+ G+ P +
Sbjct: 276 GFGECCGVFKRLLISEEEGLVPDV 299
>gi|15222513|ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920
gi|12321292|gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193295|gb|AEE31416.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 277 bits (708), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 149/391 (38%), Positives = 225/391 (57%), Gaps = 47/391 (12%)
Query: 9 EALLLFREV-QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E LLLFR + L ++ MVS LLAC + GAL +GM +H ++++ E+++ + +L
Sbjct: 216 ECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSL 275
Query: 68 KDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D+ +T +A+I LA+ G+G AL F +M G++PD
Sbjct: 276 VDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDH 335
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+ +V VL ACSH+GLV E F M ++ + P+ EHYGCLV +LGRAG + +A E I+
Sbjct: 336 VVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQ 395
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
++P+ + + L CR+ N+E + AAQ+LL+L N G Y+++SN YS + W
Sbjct: 396 SIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDD 455
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GF 261
V R R +A + +K+ PG ++E+ G H FV G+
Sbjct: 456 VARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGY 515
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P+ +++L ++DEEEK+ L H++K+AI FGL+ PG +I+I +NLR+C+DCHT T
Sbjct: 516 SPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKK 575
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS +Y RE VV DRNRFH FK G+CSCKD+W
Sbjct: 576 ISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 116/276 (42%), Gaps = 34/276 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV + EEAL + E+ +G D T LL ACT L ++ G +H + K +E D
Sbjct: 107 YVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEAD 166
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM-Q 97
V + +L K + ++++ A G ++ L F M
Sbjct: 167 VFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCS 226
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERIS-HFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+K + V L+AC++ G ++ +S H L+ + ++ LV + + G
Sbjct: 227 ETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQ--TSLVDMYVKCGC 284
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE--LLPDNGGSYVILS 214
+ KA + + M ++ ++ +H E+A R ++++ L PD+ YV +
Sbjct: 285 LDKALHIFQKME-KRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDH-VVYVSVL 342
Query: 215 NRYSSSRKWKKVKRIRELMAERNIKKPP----GCIL 246
N S S K+ +R+ M + +P GC++
Sbjct: 343 NACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLV 378
>gi|297851626|ref|XP_002893694.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339536|gb|EFH69953.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 277 bits (708), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 224/391 (57%), Gaps = 47/391 (12%)
Query: 9 EALLLFREV-QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E L+LFRE+ + L ++ MVS L AC + GAL +GM +H ++++ E+++ + +L
Sbjct: 217 ECLMLFREMCRETNLKAEESGMVSALSACANTGALNLGMSIHGFLLRNISELNIIVKTSL 276
Query: 68 KDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D+ +T +A+I A+ G+G AL F EM G++PD
Sbjct: 277 VDMYVKCGCIDNALHIFQKMEKRNNLTYSAMISGFALHGEGESALRMFSEMIKEGLEPDH 336
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+ +V +L ACSH+GLV E F M ++ + P+ EHYGCLV +LGRAG + +A E I+
Sbjct: 337 VVYVSLLNACSHSGLVKEGRRVFGEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQ 396
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
++P+ + V L CR+H N+E + AAQ+LL+L N G Y+++SN YS + W
Sbjct: 397 SIPIEQNDVVWRSFLSQCRVHQNIELGQIAAQELLKLCSHNPGDYLLISNMYSQAHMWDD 456
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GF 261
V R R +A + +K+ PG ++V G H FV G+
Sbjct: 457 VARSRTEIAIKGLKQTPGFSTVKVKGKTHRFVSQDRSHPQCKEIYKMLHQMEWQLKFEGY 516
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P+ +++L ++DEEEK+ L H++K+AI F L+ PG +I+I +NLR+C+DCHT T
Sbjct: 517 SPDLTQILLNVDEEEKKERLKGHSQKVAIAFALLYTPPGSIIKIARNLRMCSDCHTYTKK 576
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS +Y RE VV DRNRFH FK G+CSCKD+W
Sbjct: 577 ISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 607
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 13/138 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV + + E AL + E+ +G+ D T LL ACT L A+ G +H ++ K +E
Sbjct: 108 YVNEMSFEVALCFYNEMMERGIEPDNFTYPCLLKACTRLKAIREGKQIHGHVFKLGLEA- 166
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
DV +LI + CG+ + F +++ + A ++ + AC G+
Sbjct: 167 --------DVFVQNSLINMYGRCGEMELSSTVFEKLEFK----SAASWSSMFSACVGMGM 214
Query: 121 VDERISHFNLMSEKYGIR 138
E + F M + ++
Sbjct: 215 WSECLMLFREMCRETNLK 232
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 277 bits (708), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 143/378 (37%), Positives = 210/378 (55%), Gaps = 47/378 (12%)
Query: 22 LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-------------- 67
L D TM +L AC L ALE G +H YI++ D + AL
Sbjct: 428 LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487
Query: 68 --------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
KD+++ T +I M G GN+A+ F EM+ G++PD ++F+ +L ACSH+G
Sbjct: 488 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547
Query: 120 LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGL 179
L+++ F +M + I P +EHY C+V +L R G ++KA E ++ +P+A D + G L
Sbjct: 548 LLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGAL 607
Query: 180 LGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIK 239
L CR + ++E AE+ A+++ EL P+N G YV+L+N Y+ + KW++VKR+RE + ++ ++
Sbjct: 608 LCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLR 667
Query: 240 KPPGCILIEVDGVVHEFVKA-------------------------GFVPNKSEVLFDMDE 274
K PGC IE+ G V+ FV G P L + DE
Sbjct: 668 KNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADE 727
Query: 275 EEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMD 334
+KE AL H+EKLA+ FGL++ P IR+ KNLRVC DCH +SK RE V+ D
Sbjct: 728 MQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRD 787
Query: 335 RNRFHHFKNGSCSCKDFW 352
NRFHHFK+G CSC+ FW
Sbjct: 788 SNRFHHFKDGYCSCRGFW 805
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 67/144 (46%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV + E L +++++ + G+ D T++S+L+ C + G L +G +H +K + E
Sbjct: 226 YVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERR 285
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ M ++V++ T++I G+ + A++ +M+
Sbjct: 286 INFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEK 345
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
GVK D + +L AC+ +G +D
Sbjct: 346 EGVKLDVVAITSILHACARSGSLD 369
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 19/126 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y D + A+ L ++++ +G+ D V + S+L AC G+L+ G +H YI N+E
Sbjct: 327 YTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNME-- 384
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV----------KPDAITFVG 110
++ AL+ + A CG A F M ++ + KPD+ T
Sbjct: 385 -------SNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMAC 437
Query: 111 VLVACS 116
VL AC+
Sbjct: 438 VLPACA 443
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 277 bits (708), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 157/401 (39%), Positives = 227/401 (56%), Gaps = 50/401 (12%)
Query: 1 YVEDSACEEALLLFREV--QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
Y ++ +A+ +F+E+ L + +T+VS+L AC + AL G LH YI+++ +
Sbjct: 431 YAKNERPGDAIQIFQEMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFD 490
Query: 59 VDVGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEYFYE 95
+ V + AL ++V++ +LI M G G ++L+ F E
Sbjct: 491 LLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEE 550
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
M G+ P+ ITFV VL ACSH GLV++ F M E Y + P EHY C+V +LGRAG
Sbjct: 551 MIEEGISPNIITFVSVLGACSHVGLVEQGKKLFESMVE-YNVTPRAEHYACMVDLLGRAG 609
Query: 156 RIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSN 215
R+ +A ELI++M + V G LLGACRIH ++E AE A L +L P N G+YV+L++
Sbjct: 610 RLDEAVELIQSMRIQPSPQVWGSLLGACRIHGHVEYAEMACSHLFDLEPRNAGNYVLLAD 669
Query: 216 RYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA---------------- 259
Y+ ++ +V ++EL+ E ++K PGC IEV ++ FV
Sbjct: 670 IYARAKLQNQVDVLKELLEEHALEKVPGCSWIEVKKKLYSFVSVDNKNPQVEELQALIGE 729
Query: 260 --------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
G+VP+ VL+D++EEEKE L H+EKLA+ FGL+ G IRI KNLR+
Sbjct: 730 FVTQMKNEGYVPDTRSVLYDIEEEEKERILLGHSEKLAVAFGLIKTGSGEAIRITKNLRL 789
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH+ T ISK +RE VV D NRFHHF+NG CSC+D+W
Sbjct: 790 CEDCHSVTKFISKFTDREIVVRDVNRFHHFRNGVCSCRDYW 830
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 277 bits (708), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 145/391 (37%), Positives = 209/391 (53%), Gaps = 47/391 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E AL++F E+Q G T S+ +GALE G W+H +++K ++ +G +
Sbjct: 235 ETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTM 294
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
KD++T +++ A G G +A+ +F EM+ G+ +
Sbjct: 295 LDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQ 354
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
ITF+ +L ACSH GLV E +F+++ E Y + P IEHY +V +LGRAG + A I
Sbjct: 355 ITFLCILTACSHGGLVKEGKHYFDMIKE-YNLEPEIEHYVTVVDLLGRAGLLNYALVFIF 413
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MPM V G LL ACR+H N + + AA + +L PD+ G V+L N Y+S+ W
Sbjct: 414 KMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDA 473
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
R+R++M +KK P C +E+ VH FV K G+
Sbjct: 474 AARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGY 533
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ VL +DE+E+E L H+EK+A+ F L+ G IRI+KN+R+C DCH+A
Sbjct: 534 VPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKY 593
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISKV+ RE VV D NRFHHF NGSCSC D+W
Sbjct: 594 ISKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 145/398 (36%), Positives = 221/398 (55%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ ++A+ LF E+ +K + D +++ S + AC +G+LE W+ Y+ + + D
Sbjct: 298 YAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDD 357
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL +DV+ +A+IV + GQ +A+ + M+
Sbjct: 358 VFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMER 417
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV P+ +TF+G+L+AC+H+G+V E FN M++ + I P +HY C++ +LGRAG +
Sbjct: 418 DGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMAD-HKINPQQQHYACIIDLLGRAGHLD 476
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E+IK MP+ V G LL AC+ H ++E + AAQQL + P N G YV LSN Y+
Sbjct: 477 QAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYA 536
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
++R W +V +R M E+ + K GC +EV G + F
Sbjct: 537 AARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIES 596
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ GFV NK L D+++EE E L H+E++ I +GL+S G +RI KNLR C +
Sbjct: 597 RLKEGGFVANKDASLHDLNDEEAEETLCSHSERITIAYGLISTPQGTTLRITKNLRACVN 656
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT +ISK+ RE VV D NRFHHFK+G CSC D+W
Sbjct: 657 CHAATKLISKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 27/192 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ ++ALL++ ++Q ++ D T LL AC L L++G ++H + + E D
Sbjct: 94 YSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEAD 153
Query: 61 V------------------------GLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
V GL + + +++ TA++ A G+ +ALE F +M
Sbjct: 154 VFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQM 213
Query: 97 QIRGVKPDAITFVGVLVACS-HAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
+ VKPD + V VL A + L R H ++M K G+ + L + + G
Sbjct: 214 RKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVM--KMGLETEPDLLISLNTMYAKCG 271
Query: 156 RIAKAEELIKNM 167
++A A+ L M
Sbjct: 272 QVATAKILFDKM 283
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 22/145 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL +F +++ + D V +VS+L A T L LE G +H +MK +E +
Sbjct: 197 YAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETE 256
Query: 61 VGLGMALK----------------------DVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L ++L +++ A+I A G A++ F+EM
Sbjct: 257 PDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMIN 316
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE 123
+ V+PD I+ + AC+ G +++
Sbjct: 317 KDVRPDTISITSAISACAQVGSLEQ 341
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 221/398 (55%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ ++ E+A LF +Q + + D T+VS++ A + W+H Y ++ ++ D
Sbjct: 297 FTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQD 356
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL D V+T A+I G G A+E F EM+
Sbjct: 357 VYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKG 416
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G P+ TF+ VL ACSHAGLVDE +F M + YG+ P +EHYG +V +LGRAG++
Sbjct: 417 TGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLD 476
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A IKNMP+ V G +LGAC++H N+E AE +AQ + EL P+ G +V+L+N Y+
Sbjct: 477 EAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYA 536
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
++ WK V R+R M ++ ++K PG +I++ VH F
Sbjct: 537 NASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIE 596
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VP+ ++ + D++++ K LN H+EKLAI +GL+ PG I+I KNLRVCND
Sbjct: 597 EIKDMGYVPD-TDSIHDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCND 655
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT +IS + RE ++ D RFHHFK+G CSC D+W
Sbjct: 656 CHNATKLISLLTGREIIMRDIQRFHHFKDGKCSCGDYW 693
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 86/218 (39%), Gaps = 35/218 (16%)
Query: 18 QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE--VDVGLG----------- 64
+ G D VT+VS+L AC AL +H + ++ ++ V+V
Sbjct: 111 EEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAV 170
Query: 65 ---------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC 115
M +++ ++ A+I A G +A+ F+ M GV + + L AC
Sbjct: 171 EAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQAC 230
Query: 116 SHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI-----KNMPMA 170
G +DE + + + + G+ ++ L+ + R A ++ K ++
Sbjct: 231 GELGYLDE-VRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRIS 289
Query: 171 LDHFVLGGLLGACRIHDNLEAAER--AAQQLLELLPDN 206
+ +LG C E AER A QL + PD+
Sbjct: 290 WNAMILGFTQNECP-----EDAERLFARMQLENVRPDS 322
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 208/391 (53%), Gaps = 47/391 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E AL+ F E+ G T S+ + LGALE G W+H +++K ++ +G L
Sbjct: 235 ESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTL 294
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
KD++T +++ A G G +A+ +F EM+ GV +
Sbjct: 295 LDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQ 354
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
ITF+ +L ACSH GLV E +F +M E Y + P I+HY +V +LGRAG + A I
Sbjct: 355 ITFLCILTACSHGGLVKEGKRYFEMMKE-YDLEPEIDHYVTVVALLGRAGLLNYALVFIF 413
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MPM V G LL ACR+H N + + AA + EL PD+ G V+L N Y+S+ +W
Sbjct: 414 KMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDA 473
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
R+R +M +KK P C +E++ VH FV K G+
Sbjct: 474 AARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYKMWGEISKKIRKEGY 533
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ VL +D++EKE L H+EKLA+ F L+ G IRI+KN+R+C DCH+A
Sbjct: 534 VPDMDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKY 593
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISKV+ RE VV D NRFHHF +GSCSC D+W
Sbjct: 594 ISKVFGREIVVRDTNRFHHFSSGSCSCGDYW 624
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 148/397 (37%), Positives = 222/397 (55%), Gaps = 49/397 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI--- 57
Y++++ EA+ L+ ++ G D V++ S+L AC AL +G +H YI +K +
Sbjct: 285 YMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPN 344
Query: 58 -------------------EVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
DV M +DV++ TA+I G+G A+ F +MQ
Sbjct: 345 LLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQD 404
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD+I FV L ACSHAGL++E S F LM++ Y I P +EH C+V +LGRAG++
Sbjct: 405 SGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVK 464
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I+ MPM + V G LLGACR+H N + AA +L +L P+ G YV+LSN Y+
Sbjct: 465 EAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYA 524
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ +W++V IR +M + +KK PG +EV+ ++H F+
Sbjct: 525 KAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVK 584
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPM---PGVLIRIIKNLRV 311
+ G+VP+ L D++EE+KET L +H+EKLAI F L++ IRI KNLR+
Sbjct: 585 KMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTEEEDSNNAIRITKNLRI 644
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSC 348
C DCH A +IS++ +RE ++ D NRFH F+ G CSC
Sbjct: 645 CGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSC 681
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ ++AL + RE++ ++ D TM SLL A ++ V M++ D
Sbjct: 217 YAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV-MYVK----------D 265
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+ M K +++ +I V +A+E + M+ G +PDA++ VL AC
Sbjct: 266 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSA 325
Query: 121 VD--ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ ++I + E+ + P++ L+ + + G + +A ++ +NM
Sbjct: 326 LSLGKKIHGY---IERKKLIPNLLLENALIDMYAKCGCLDRARDVFENM 371
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 276 bits (707), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 153/391 (39%), Positives = 227/391 (58%), Gaps = 47/391 (12%)
Query: 1 YVEDSACEEALLLFREVQH-KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ EA+ + ++ + ++ T VS++ A +H+GAL+ GM +H ++K ++ +
Sbjct: 400 YTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYL 459
Query: 60 DVGLGMAL----------KDVMTL------------TALIVVLAMCGQGNKALEYFYEMQ 97
DV + L +D M+L A+I L + G+G +AL+ F +M
Sbjct: 460 DVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDML 519
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
VK D ITFV +L ACSH+GLVDE F++M ++YGI+PS++HYGC+V +LGRAG +
Sbjct: 520 AERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYL 579
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA EL++NMP+ D + G LL AC+I+ N E A+ +LLE+ +N G YV+LSN Y
Sbjct: 580 EKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIY 639
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
+++ KW+ V ++R L +R ++K PG + V F
Sbjct: 640 ANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLS 699
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+VP+ S V D++E+EKE LN H+E+LAI FG++S P IRI KNLRVC
Sbjct: 700 AKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCG 759
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNG 344
DCH AT IS++ RE VV D NRFHHFK+G
Sbjct: 760 DCHNATKYISRISEREIVVRDSNRFHHFKDG 790
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 67/148 (45%), Gaps = 24/148 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ ++ AL + ++ +G+ D +T+ S+L C + G+ +H +++K ++ D
Sbjct: 197 FCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSD 256
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL +D+++ ++I + AL +F MQ+
Sbjct: 257 VFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQL 316
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERIS 126
G++PD +T V + S L D+RIS
Sbjct: 317 GGIRPDLLTVVSLTSIFSQ--LSDQRIS 342
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHA-G 119
V + M +KDV + A+I G AL M+ GVK D IT +L C+ +
Sbjct: 178 VFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDD 237
Query: 120 LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+++ + H +++ K+G+ + L+ + + GR+ A+ + M
Sbjct: 238 VINGVLIHLHVL--KHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQM 283
>gi|357119334|ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Brachypodium distachyon]
Length = 635
Score = 276 bits (707), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 226/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ + AL +FR++ KG+ ++ +V+ L A +G LE G ++H + + + V
Sbjct: 238 YVKEGELDVALGVFRDMVEKGVRVNEAAVVTALSAAAQMGLLEHGRFVHEVVQRTGMPVS 297
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL +DV A+I LA G G A+E F+
Sbjct: 298 VNVGAALVDMFSKCGCVAVAREVFDGMPRRDVFAWNAMICGLASHGLGQDAVELFWRFLD 357
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ P ITFVGVL ACS GLV E +F LM +KY I P +EHYGC+V +LGRAG ++
Sbjct: 358 EGLWPTDITFVGVLNACSRCGLVAEGRRYFKLMVDKYRIEPEMEHYGCMVDLLGRAGLVS 417
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A ELI+ M +A D + G +L AC+ H+ ++ +L+EL P + G YV+L++ Y+
Sbjct: 418 EAIELIEGMHIAPDPVLWGTVLSACKTHNLVDLGITVGNKLIELEPAHDGHYVLLASIYA 477
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++KW +V+ +R+LM+ R K G L+E G +H+F+
Sbjct: 478 KAKKWDEVREVRKLMSSRGTGKSAGWSLMEAQGNLHKFLVGDMDHKDSVQIYNMLDMINR 537
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VP+ S VL D+ +EEK A+ +H+E+LAI +G + G IRI+KNL+VC D
Sbjct: 538 RLADAGYVPDVSSVLHDIGDEEKVHAIKVHSERLAIAYGFIVTEVGSPIRIVKNLQVCGD 597
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH + +++KV+NRE +V D +RFHH K G CSC D+W
Sbjct: 598 CHEFSKMVTKVFNREIIVRDGSRFHHMKEGKCSCLDYW 635
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 276 bits (706), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 212/378 (56%), Gaps = 46/378 (12%)
Query: 21 GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI----------------------E 58
G DK+T VS++ +C+ L L G +H +K
Sbjct: 297 GFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDS 356
Query: 59 VDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHA 118
+ L +DV+ +++I GQG +A++ F EM+ + + ITF+ +L ACSH
Sbjct: 357 IKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHC 416
Query: 119 GLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGG 178
GL D+ + F++M +KYG++ ++HY CLV +LGR+G + +AE +I++MP+ D +
Sbjct: 417 GLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKT 476
Query: 179 LLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNI 238
LL AC+IH N E A R A ++L + P + SYV+L+N YSS+ +W+ V +R M ++ +
Sbjct: 477 LLSACKIHKNAEIARRVADEVLRIDPQDSASYVLLANIYSSANRWQNVSEVRRAMKDKMV 536
Query: 239 KKPPGCILIEVDGVVHEF------------------------VKAGFVPNKSEVLFDMDE 274
KK PG +EV VH+F + G+VP+ S VL DMD
Sbjct: 537 KKEPGISWVEVKNQVHQFHMGDECHPKHVEINQYLEELTSEIKRQGYVPDTSSVLHDMDN 596
Query: 275 EEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMD 334
EEKE L H+EKLAI F L++ GV IR++KNLRVC+DCH A IS++ E +V D
Sbjct: 597 EEKEQILRHHSEKLAIAFALMNTPEGVPIRVMKNLRVCSDCHVAIKYISEIKKLEIIVRD 656
Query: 335 RNRFHHFKNGSCSCKDFW 352
+RFHHFKNG+CSC D+W
Sbjct: 657 SSRFHHFKNGTCSCGDYW 674
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 22/136 (16%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEALLLF + D+ ++ S+L C HLGAL G +H Y+MK E ++ +G +L
Sbjct: 183 EEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSL 242
Query: 68 K----------------------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
++ L+ A G L+ + M++ G +PD
Sbjct: 243 AHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDK 302
Query: 106 ITFVGVLVACSHAGLV 121
ITFV V+ +CS ++
Sbjct: 303 ITFVSVISSCSELAIL 318
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 216/399 (54%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ EE L +F E+Q G+ +K T+ S+L AC HL L G H Y + D
Sbjct: 401 YVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTAD 460
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL D +++ +I+ + G G +AL F MQ
Sbjct: 461 TMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQS 520
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD +TF+ ++ ACSH+GLV E FN M++ +GI P +EHY C+V +L RAG
Sbjct: 521 EGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFK 580
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+ I+ MP+ D V G LL ACR++ N+E E ++++ +L P++ G++V+LSN YS
Sbjct: 581 EVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYS 640
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGF--------VPNK----- 265
+ +W ++R E+ +K PGC IE+ GVVH F+ G+ + NK
Sbjct: 641 AVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELL 700
Query: 266 ------------SEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
S V D++EEEKE L H+EKLAI FG++S P I + KNLRVC
Sbjct: 701 VEMKRLGYQAESSYVFQDVEEEEKERVLLYHSEKLAIAFGILSLSPDKHIIVTKNLRVCG 760
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTA IS V R+ V D +RFHHFK+G C+C DFW
Sbjct: 761 DCHTAIKFISLVTKRDITVRDASRFHHFKDGICNCGDFW 799
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 69/168 (41%), Gaps = 33/168 (19%)
Query: 27 VTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG---------------------- 64
VT+ +++ C +L L G LH Y +K +D+ +G
Sbjct: 326 VTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNE 385
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSH-AGLVDE 123
M L+D ++ TA+I G + L F EMQ+ G+ P+ T VL AC+H AGL
Sbjct: 386 MDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGL--- 442
Query: 124 RISHFNLMSEKY----GIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
H+ S Y G L+ + + G+I A ++ M
Sbjct: 443 ---HYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRM 487
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 151/398 (37%), Positives = 221/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGM-------W----LH 49
Y + EAL LF +Q +G+ D + L ACT LGAL++G W +
Sbjct: 248 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDN 307
Query: 50 PYIMKKNIEVDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
P + I++ G M KD++ A+I+ L M G A +M+
Sbjct: 308 PVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEK 367
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVK + TF+G+L +C+H GL+ + +F+ M++ Y I P IEHYGC+V +L RAG +
Sbjct: 368 SGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQ 427
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +L+ +MPM + +LG LLG C+IH N E AE +QL+ L P N G+YV+LSN YS
Sbjct: 428 EAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYS 487
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
+ +W+ ++R M + ++K P C +E +G VHEF
Sbjct: 488 NRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGL 547
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P V+FD+++EEKE L H+EKLAI F L+ PG IR+ KNLRVC+D
Sbjct: 548 EMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSD 607
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA ++S++ +RE +V D NRFH F++GSCSC D+W
Sbjct: 608 CHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 645
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVG--MWLHP-------- 50
Y++ EA+ + R G+ D T V +L AC + L G +W
Sbjct: 147 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQS 206
Query: 51 -YIMKKNIEVDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
++ +++ V G M KD + A++ A G +AL+ F MQ
Sbjct: 207 VFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQA 266
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
G+KPD G L AC+ G +D
Sbjct: 267 EGMKPDCYAVAGALSACTRLGALD 290
>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
Length = 920
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 164/397 (41%), Positives = 218/397 (54%), Gaps = 54/397 (13%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK-NIEVDVGLGMAL- 67
A+ F +QH+G DK T+VS++ C LG LE+G + + +E DV + A+
Sbjct: 524 AITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVM 583
Query: 68 ------------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG-VK 102
KD++ +I A G G KAL+ F MQ R V+
Sbjct: 584 NMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVR 643
Query: 103 PDAITFVGVLVACSHAGLVDERISHFNLMSEKYGI-RPSIEHYGCLVYILGRAGRIAKAE 161
PD+ TFV VL CSHAGLV++ I F L E GI + +EHY CLV +LGR G + +AE
Sbjct: 644 PDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAE 703
Query: 162 ELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSR 221
+ I+ MP+ D V LLGAC + +LE ERAA+ +EL + YV+LSN Y+++
Sbjct: 704 DFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAG 763
Query: 222 KWKKVKRIRELMAERNIKKP-PGCILIEVDGVVHEFV----------------------- 257
+W+ R+RE MAER +KK PG I V VHEF
Sbjct: 764 RWEDSIRVREDMAERRVKKRVPGKSSIVVKNRVHEFFARDRSHPQSDAIYAELERLKGLI 823
Query: 258 -KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCH 316
+AG+VP+ VL D++EE+KE L H+EKLAI FGL+S IR+IKNLRVC DCH
Sbjct: 824 REAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDCH 883
Query: 317 TATNIISKVYNRETVVMDRNRFHHF-KNGSCSCKDFW 352
TAT I++V RE V D NRFHHF K+G CSC D+W
Sbjct: 884 TATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 920
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 77/188 (40%), Gaps = 23/188 (12%)
Query: 4 DSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL 63
D + ALLL R + +GL ++ + V++L +C +L + +H + + DV +
Sbjct: 215 DERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVV 274
Query: 64 G----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV 101
MA+++ ++ A+I A CG + A ++ MQ G
Sbjct: 275 ATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGF 334
Query: 102 KPDAITFVGVL-VACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA 160
+P+ ITFV L ACS + + + G+ + LV + G G I +A
Sbjct: 335 RPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRA 394
Query: 161 EELIKNMP 168
+P
Sbjct: 395 RAAFDAIP 402
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 150/390 (38%), Positives = 219/390 (56%), Gaps = 47/390 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
+AL F +++ + + D T VS++ A L W+H +M+ ++ +V + AL
Sbjct: 421 DALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALV 480
Query: 69 D----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
D V T A+I G G ALE F EMQ +KP+ +
Sbjct: 481 DMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGV 540
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF+ V+ ACSH+GLV+ + F +M E Y I S++HYG +V +LGRAGR+ +A + I
Sbjct: 541 TFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQ 600
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP+ V G +LGAC+IH N+ AE+AA++L EL PD+GG +V+L+N Y ++ W+KV
Sbjct: 601 MPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKV 660
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGFV 262
++R M + ++K PGC ++E+ VH F +AG+V
Sbjct: 661 GQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYV 720
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ + VL ++ + KE L+ H+EKLAI+FGL++ G I + KNLRVC DCH AT I
Sbjct: 721 PDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYI 779
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S V RE VV D RFHHFKNG+CSC D+W
Sbjct: 780 SLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 22/136 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI----MKKN 56
YV++ +EA+L+F+++ +G+ V+++ L AC LG LE G ++H + +N
Sbjct: 312 YVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRN 371
Query: 57 I--------------EVDVGLGM----ALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ EVD M + +++ A+I+ A G+ AL YF +M+
Sbjct: 372 VSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS 431
Query: 99 RGVKPDAITFVGVLVA 114
R VKPD T+V V+ A
Sbjct: 432 RTVKPDTFTYVSVITA 447
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 22/141 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ AL + + + + L +T+VS+L A + L + VG +H Y M+ +
Sbjct: 211 YSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSL 270
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL D V++ ++I +A+ F +M
Sbjct: 271 VNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD 330
Query: 99 RGVKPDAITFVGVLVACSHAG 119
GVKP ++ +G L AC+ G
Sbjct: 331 EGVKPTDVSVMGALHACADLG 351
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/378 (37%), Positives = 211/378 (55%), Gaps = 47/378 (12%)
Query: 22 LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-------------- 67
L D TM +L AC L ALE G +H YI++ D + AL
Sbjct: 428 LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487
Query: 68 --------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
KD+++ T +I M G GN+A+ F EM+ G++PD ++F+ +L ACSH+G
Sbjct: 488 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547
Query: 120 LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGL 179
L+++ F +M + I P +EHY C+V +L R G ++KA + I+ +P+A D + G L
Sbjct: 548 LLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGAL 607
Query: 180 LGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIK 239
L CRI+ ++E AE+ A+++ EL P+N G YV+L+N Y+ + K ++VKR+RE + ++ ++
Sbjct: 608 LCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLR 667
Query: 240 KPPGCILIEVDGVVHEFVKA-------------------------GFVPNKSEVLFDMDE 274
K PGC IE+ G V+ FV G+ P L + DE
Sbjct: 668 KNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADE 727
Query: 275 EEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMD 334
+KE AL H+EKLA+ FGL++ P IR+ KNLRVC DCH +SK RE V+ D
Sbjct: 728 MQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRD 787
Query: 335 RNRFHHFKNGSCSCKDFW 352
NRFHHFK+G CSC+ FW
Sbjct: 788 SNRFHHFKDGYCSCRGFW 805
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 65/144 (45%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV + E L +++++ + G+ D T++S+L+ C + G L +G +H +K + E
Sbjct: 226 YVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERR 285
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ M ++V++ T++I G + A+ +M+
Sbjct: 286 INFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEK 345
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
GVK D + +L AC+ +G +D
Sbjct: 346 EGVKLDVVAITSILHACARSGSLD 369
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 19/126 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y D + A++L ++++ +G+ D V + S+L AC G+L+ G +H YI N+
Sbjct: 327 YTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMA-- 384
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV----------KPDAITFVG 110
++ AL+ + A CG A F M ++ + KPD+ T
Sbjct: 385 -------SNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMAC 437
Query: 111 VLVACS 116
+L AC+
Sbjct: 438 ILPACA 443
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 220/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL LF +Q +G D T+V L ACT LGAL++G + + +
Sbjct: 118 YASNGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGN 177
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG AL +D++ A+I+ L M G A +M+
Sbjct: 178 PVLGTALIDMYAKCGSTSEAWMVFQQMLERDIIVWNAMILGLGMTGHEKIAFALVGQMKK 237
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVK + TF+G+L +C+H GLV++ +F+ M+ Y I P IEHYGC+V + RAG +
Sbjct: 238 SGVKLNDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHYGCMVDLFSRAGLLE 297
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI +MPM + V G LLG C+IH N + AE A +QL+ L P N G+YV+LSN YS
Sbjct: 298 EAHQLIGDMPMLANAVVWGALLGGCKIHRNADLAEHALKQLIRLEPWNSGNYVMLSNIYS 357
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
+S +W+ ++R M + I+K P +E+DG VH+F
Sbjct: 358 NSGRWEDAAKLRLEMKAKGIEKVPASSWVELDGKVHKFYVGDDSHPLSDKIYAKLDELGM 417
Query: 257 -VKA-GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+KA G+ P V+FD++ EEKE L H+EK+AI F L++ PG IR+ KNLRVC D
Sbjct: 418 EMKAMGYEPTTEVVMFDVENEEKENTLVHHSEKIAIAFSLITTEPGETIRVTKNLRVCTD 477
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A +IS++ RE VV D NRFH F++G CSC D+W
Sbjct: 478 CHSAIKLISRITCREIVVRDNNRFHCFRDGHCSCNDYW 515
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 23/145 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVG--MWLHP-------- 50
Y++ EA+ + R G+ D T V +L AC + LE G +W
Sbjct: 16 YMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETGEAVWAAARQEEGVAE 75
Query: 51 --YIMKKNIEVDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
++ +++ V G M +D + A++ A G +AL+ F+ MQ
Sbjct: 76 SVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLFFAMQ 135
Query: 98 IRGVKPDAITFVGVLVACSHAGLVD 122
+ G KPD T VG L AC+ G +D
Sbjct: 136 MEGAKPDCYTVVGALSACTRLGALD 160
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 218/397 (54%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V++ E+ALL+FR++Q G+ TM++LL AC+HL AL+ G H Y + + D
Sbjct: 389 VQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDT 448
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ A+ +D+++ +I+ + G +AL F E+Q
Sbjct: 449 SICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQAL 508
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G+KPD +T + VL ACSH+GLV E F+ MS+ + I+P + HY C+V +L RAG + +
Sbjct: 509 GLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDE 568
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A I+ MP + + G LL ACR H N+E E+ ++++ L P+ G++V++SN YSS
Sbjct: 569 AYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSS 628
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
+W IR + KK PGC +E+ GV+H F+
Sbjct: 629 VGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQ 688
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
K G+ + S VL D++EEEKE L H+EK+AI FG+++ P I + KNLR+C DC
Sbjct: 689 MKKLGYRADSSFVLHDVEEEEKEQILLYHSEKVAIAFGILNTSPSSRILVTKNLRICVDC 748
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H+A I+ + RE V D +RFHHFK+G C+C+DFW
Sbjct: 749 HSAIKFITLLTEREITVRDASRFHHFKDGICNCQDFW 785
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 105/244 (43%), Gaps = 37/244 (15%)
Query: 1 YVEDSACEEALLLFREVQH-KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
YV + +AL L+ ++ GL T+ ++L AC L L+ G LH +++K +++
Sbjct: 286 YVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDL 345
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
D +G +L KD ++ +A+I G KAL F +MQ
Sbjct: 346 DTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQ 405
Query: 98 IRGVKPDAITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
G+ P T + +L ACSH A L H + + SI ++ + + G+
Sbjct: 406 SSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSI--CNAIIDMYSKCGK 463
Query: 157 IAKAEELIKNMP----MALDHFVLG-GLLGACRIHDNLEAAERAAQ-QLLELLPDNGGSY 210
I + E+ M ++ + ++G G+ G C +EA + Q L L PD+
Sbjct: 464 ITISREIFDRMQNRDIISWNTMIIGYGIHGLC-----VEALSLFQELQALGLKPDDVTLI 518
Query: 211 VILS 214
+LS
Sbjct: 519 AVLS 522
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/147 (19%), Positives = 58/147 (39%), Gaps = 24/147 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++++ L+ + G+T T LL AC+ L AL++G +H + + +D
Sbjct: 82 YAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMD 141
Query: 61 VGLGMAL------------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+ + AL +D++ A+I + + + +M
Sbjct: 142 LYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQM 201
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDE 123
Q GV P++ T V +L A + +
Sbjct: 202 QQAGVTPNSSTLVSILPTIGQANALHQ 228
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/393 (38%), Positives = 226/393 (57%), Gaps = 48/393 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEAL LFR++Q +G+ + VT S+L A + L AL G +H ++++ V L +L
Sbjct: 274 EEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSL 333
Query: 68 KDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIRG-VKPD 104
D+ ++ A++V + G + LE F M+ VKPD
Sbjct: 334 IDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPD 393
Query: 105 AITFVGVLVACSHAGLVDERISHF-NLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
+IT++ VL CSH L D + F N+++ K GI P I HYGC+V +LGRAGR+ +A +
Sbjct: 394 SITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDF 453
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
IK MP + G LLG+CR+H ++E Q+LLEL P+N G+YVILSN Y+S+ KW
Sbjct: 454 IKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKW 513
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVH------------------------EFVKA 259
+ ++ IR+LM E+ + K PG +E+D +VH +F +
Sbjct: 514 EDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKFKED 573
Query: 260 GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
G+VP+ S VL+D+DEE+KE L H+EKLA+ FGL++ G IR+IKNLR+C DCH+
Sbjct: 574 GYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFA 633
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+S++Y R ++ D+NRFH+ G CSC D+W
Sbjct: 634 KFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 666
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 25/183 (13%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LF E+ + T ++L +C E G +H +K+N E + +G +L
Sbjct: 174 EALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLL 233
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+DV+ TA+I A G +AL+ F ++QI G+ +++
Sbjct: 234 DMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSV 293
Query: 107 TFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
T+ VL A S A L + H +++ + G + L+ + + G + A +
Sbjct: 294 TYASVLTALSGLAALNHGKQVHSHVL--RSGQYSYVVLLNSLIDMYSKCGNVCYARRIFD 351
Query: 166 NMP 168
+MP
Sbjct: 352 SMP 354
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 157/399 (39%), Positives = 229/399 (57%), Gaps = 52/399 (13%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ A+ LF+E + K LT D+VTMVS++ AC HLGALE+G W+ ++ + I++
Sbjct: 210 YAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKL 269
Query: 60 DVG----------------------LGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ MA +DV++ LI A G G +A+ M+
Sbjct: 270 SISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMK 329
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G++PD +TF+GVL ACSHAGL++E F + + P+I+HY C+V +LGR G +
Sbjct: 330 EGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-----PAIDHYACMVDLLGRVGEL 384
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
A+ ++ MPM V G LL A RIH +E E AA +L EL PDN G++++LSN Y
Sbjct: 385 EDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIY 444
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+S+ +WK V+RIRE M + +KK G +E G +H+F+
Sbjct: 445 ASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELR 504
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+AG++ +KS VL D++EEEKE + H+EKLAI + L+ G +IR++KNLRVC
Sbjct: 505 KKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCW 564
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTA +ISK+ R +V D NRFH F +G CSCKD+W
Sbjct: 565 DCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 603
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 17/169 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EEAL LF E+ G + VT +++ A +G L+ L + +N
Sbjct: 146 YAQNGLAEEALRLFDEML--GAYRNSVTWNAMISAYMRVGDLDSARKLFNTMPGRN---- 199
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM-QIRGVKPDAITFVGVLVACSHAG 119
V+T ++I A GQ A+E F EM + + PD +T V V+ AC H G
Sbjct: 200 ---------VVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLG 250
Query: 120 LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
++ ++E I+ SI + ++++ R G + A+ + + M
Sbjct: 251 ALELGNWVVRFLTENQ-IKLSISGHNAMIFMYSRCGSMEDAKRVFQEMA 298
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 218/391 (55%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EE L LF +++ +GL + +C+ LG+L+ G LH I++ + + +G AL
Sbjct: 392 EEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNAL 451
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D ++ A+I LA G G +A++ + +M + PD
Sbjct: 452 ITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDR 511
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
ITF+ +L ACSHAGLV E +F+ M YGI P +HY L+ +L RAG ++A+ + +
Sbjct: 512 ITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTE 571
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MP + LL C IH N+E +AA +LLEL+P G+Y+ LSN Y++ +W +
Sbjct: 572 SMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDGTYISLSNMYAALGQWDE 631
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
V R+R+LM ER +KK PGC IEV+ +VH F+ K G+
Sbjct: 632 VARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAVYRYLEQLVHEMRKLGY 691
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ VL DM+ E+KE AL+ H+EKLA+ +G++ G IR+ KNLR+C DCH A
Sbjct: 692 VPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKY 751
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISKV +RE +V DR RFHHF+NG CSC ++W
Sbjct: 752 ISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 98/212 (46%), Gaps = 17/212 (8%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV EEA L R + G+ D+ T S++ A ++ G +G +H Y+++ ++
Sbjct: 249 YVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPS 308
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+++ + ALI + CG+ +A F +M ++ D +++ +L C +A
Sbjct: 309 GHFVLSVNN-----ALITLYTRCGKLVEARRVFDKMPVK----DLVSWNAILSGCVNARR 359
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPM-ALD--HFVLG 177
++E S F M + S+ + ++ L + G + +L M + L+ +
Sbjct: 360 IEEANSIFREMPVR-----SLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYA 414
Query: 178 GLLGACRIHDNLEAAERAAQQLLELLPDNGGS 209
G + +C + +L+ ++ Q+++L D+ S
Sbjct: 415 GAIASCSVLGSLDNGQQLHSQIIQLGHDSSLS 446
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 218/398 (54%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +EAL LF +Q +G+ D T+V ++ A W+H ++ ++ +
Sbjct: 422 YAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNN 481
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL D V+T A+I G G + L+ F EMQ
Sbjct: 482 VFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQK 541
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
VKP+ ITF+ V+ ACSH+G V+E + F M E Y + P+++HY +V +LGRAG++
Sbjct: 542 GAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLD 601
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A I+ MP+ VLG +LGAC+IH N+E E+AAQ+L +L PD GG +V+L+N Y+
Sbjct: 602 DAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYA 661
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
S+ W KV ++R M ++ + K PGC +E+ +H F
Sbjct: 662 SNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLGD 721
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VP+ + D++E+ K+ L+ H+E+LAI FGL++ PG + I KNLRVC D
Sbjct: 722 EIKAAGYVPDPDSI-HDVEEDVKKQLLSSHSERLAIAFGLLNTSPGTTLHIRKNLRVCGD 780
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH T IS V RE +V D RFHHFKNGSCSC D+W
Sbjct: 781 CHDTTKYISLVTGREIIVRDLRRFHHFKNGSCSCGDYW 818
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 23/189 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ + AL L ++Q G D VT+VS+L A + AL +G +H Y + E
Sbjct: 221 YAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESL 280
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + GM K V++ +I A G+ +A F +M
Sbjct: 281 VNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLD 340
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G P +T +GVL+AC++ G + ER + + +K + ++ L+ + + R+
Sbjct: 341 EGEVPTRVTMMGVLLACANLGDL-ERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVD 399
Query: 159 KAEELIKNM 167
A + N+
Sbjct: 400 IAASIFNNL 408
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 21/133 (15%)
Query: 3 EDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVG 62
++ EEA F ++ +G +VTM+ +LLAC +LG LE G ++H + K ++ +V
Sbjct: 324 QNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVS 383
Query: 63 LGMAL---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV 101
+ +L K +T A+I+ A G +AL F MQ +G+
Sbjct: 384 VMNSLISMYSKCKRVDIAASIFNNLEKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGI 443
Query: 102 KPDAITFVGVLVA 114
K D T VGV+ A
Sbjct: 444 KLDCFTLVGVITA 456
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVA 114
M KD+++ T L+ A G +AL+ +MQ G KPD++T V +L A
Sbjct: 206 MQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPA 255
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 217/398 (54%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE-- 58
Y ++ EEA+ + E++ G + ++ T L AC + ALE+G +H +++ E
Sbjct: 353 YAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKG 412
Query: 59 --------------------VDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
DV G+ KD+++ ++ A G G +AL F M
Sbjct: 413 CLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMIT 472
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVKPD IT VGVL ACSH GL D +F+ M++ YGI P+ +HY C++ +LGRAG +
Sbjct: 473 AGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLE 532
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A+ LI+NMP D G LLGA RIH N+E E+AA+ + ++ P N G YV+LSN Y+
Sbjct: 533 EAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYA 592
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+S +W V ++R M + ++K PG +EV +H F
Sbjct: 593 ASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDL 652
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+V + VL D++EEEK+ L H+EKLA+ FG+++ G IR++KNLRVC D
Sbjct: 653 KMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGILTMPSGKPIRVMKNLRVCED 712
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ISK+ R +V D +R+HHF G CSC+D+W
Sbjct: 713 CHNAIKHISKIVGRLIIVRDSHRYHHFSEGICSCRDYW 750
>gi|224065074|ref|XP_002301657.1| predicted protein [Populus trichocarpa]
gi|222843383|gb|EEE80930.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/399 (37%), Positives = 215/399 (53%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V++ EAL +FR +Q +G+ VT+ ++L C + AL G +H I+K D
Sbjct: 106 FVKEDKLGEALDVFRRMQREGMGFSWVTLTTILPICARVTALLSGKEIHAQIVKSARRPD 165
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + GM KD+ + ++ A+ G A++ F EM
Sbjct: 166 VLVLNSLVDMYVKCGVVDYGRRLFDGMRSKDLTSWNTMLTGYAINGYMRVAMDLFNEMAS 225
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD +TF+ +L CSHAGL ++ F+ M +G+ PS+EHY CLV +LGRAGRI
Sbjct: 226 CGIRPDDVTFIALLSGCSHAGLTEDGQKLFHRMEMDFGVSPSLEHYACLVDMLGRAGRID 285
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A ++KNMPM + G LL +CR+H+ + AE A +L EL P N G+YV+LSN Y+
Sbjct: 286 AALVVVKNMPMKTSGSIWGSLLNSCRLHNEVPLAEAIANRLFELEPYNPGNYVMLSNIYA 345
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
++ W V +RE+M R I+K GC I+V +H FV
Sbjct: 346 NAGMWDSVNMVREMMQTRRIRKEAGCSWIQVKNKIHSFVAGGGFEFRNSDEYKKIWNKLR 405
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G++PN VL D++EE K + H+E+LA F L+ G+ IRI KNLRVC
Sbjct: 406 EAMEEFGYIPNTDVVLHDVNEETKAMWVCGHSERLATVFSLIHTAAGMPIRITKNLRVCV 465
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+ I+S+V R V+ D NRFHHFK G+CSC D+W
Sbjct: 466 DCHSWIKIVSRVTGRVIVLRDTNRFHHFKEGACSCNDYW 504
>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
Length = 916
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 164/397 (41%), Positives = 218/397 (54%), Gaps = 54/397 (13%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK-NIEVDVGLGMAL- 67
A+ F +QH+G DK T+VS++ C LG LE+G + + +E DV + A+
Sbjct: 520 AITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVM 579
Query: 68 ------------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG-VK 102
KD++ +I A G G KAL+ F MQ R V+
Sbjct: 580 NMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVR 639
Query: 103 PDAITFVGVLVACSHAGLVDERISHFNLMSEKYGI-RPSIEHYGCLVYILGRAGRIAKAE 161
PD+ TFV VL CSHAGLV++ I F L E GI + +EHY CLV +LGR G + +AE
Sbjct: 640 PDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAE 699
Query: 162 ELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSR 221
+ I+ MP+ D V LLGAC + +LE ERAA+ +EL + YV+LSN Y+++
Sbjct: 700 DFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAG 759
Query: 222 KWKKVKRIRELMAERNIKK-PPGCILIEVDGVVHEFV----------------------- 257
+W+ R+RE MAER +KK PG I V VHEF
Sbjct: 760 RWEDSIRVREDMAERRVKKRAPGKSSIVVKNRVHEFFARDRSHPQSDEIYAELERLKGLI 819
Query: 258 -KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCH 316
+AG+VP+ VL D++EE+KE L H+EKLAI FGL+S IR+IKNLRVC DCH
Sbjct: 820 REAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDCH 879
Query: 317 TATNIISKVYNRETVVMDRNRFHHF-KNGSCSCKDFW 352
TAT I++V RE V D NRFHHF K+G CSC D+W
Sbjct: 880 TATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 916
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 77/188 (40%), Gaps = 23/188 (12%)
Query: 4 DSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL 63
D + ALLL R + +GL ++ + V++L +C +L + +H + + DV +
Sbjct: 211 DERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVV 270
Query: 64 G----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV 101
MA+++ ++ A+I A CG + A ++ MQ G
Sbjct: 271 ATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGF 330
Query: 102 KPDAITFVGVL-VACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA 160
+P+ ITFV L ACS + + + G+ + LV + G G I +A
Sbjct: 331 RPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRA 390
Query: 161 EELIKNMP 168
+P
Sbjct: 391 RAAFDAIP 398
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 218/391 (55%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EA+ LFR + + + T+ ++L + L +L G +H +K V + AL
Sbjct: 396 EAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALI 455
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+D ++ T++I+ LA G +ALE F M + G++PD
Sbjct: 456 TMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
IT+VGV AC+HAGLV++ +F++M + I P++ HY C+V + GRAG + +A+E I+
Sbjct: 516 ITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIE 575
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP+ D G LL ACR++ N++ + AA++LL L P+N G+Y L+N YS+ KW++
Sbjct: 576 KMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEE 635
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEF------------------------VKAGF 261
+IR+ M + +KK G IEV VH F K G+
Sbjct: 636 AAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGY 695
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ + VL D++EE KE L H+EKLAI FGL+S +RI+KNLRVCNDCHTA
Sbjct: 696 VPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKF 755
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISK+ RE +V D RFHHFK+G CSC+D+W
Sbjct: 756 ISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
>gi|296085287|emb|CBI29019.3| unnamed protein product [Vitis vinifera]
Length = 408
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/378 (40%), Positives = 208/378 (55%), Gaps = 42/378 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVT-MVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y + EAL LF ++Q G+ T +V + C K ++
Sbjct: 47 YAQCGKPNEALALFDQMQAVGVNSIVGTALVDMYAKCG----------------KISLAT 90
Query: 60 DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
V M KDV+ +I +A+ G +A + F EM+ GV+P+ ITFV +L ACSHAG
Sbjct: 91 QVFNAMESKDVLAWNTIIAGMAILGHVKEAQQLFKEMKEAGVEPNDITFVAMLSACSHAG 150
Query: 120 LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGL 179
+VDE + MS YGI P +EHYGC++ +L RAG + +A ELI MPM + LG L
Sbjct: 151 MVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPMEPNPCALGAL 210
Query: 180 LGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIK 239
L CRIH N E E ++L+ L P + G Y++LSN Y++++KW +++R LM I
Sbjct: 211 LEGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGIS 270
Query: 240 KPPGCILIEVDGVVHEFVKA-------------------------GFVPNKSEVLFDMDE 274
K PG +IE+ G+VH FV G+ + L DM+E
Sbjct: 271 KVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNGLLDMEE 330
Query: 275 EEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMD 334
E+KE AL +H+EKLAI +GL+ IRI+KNLRVC DCH T +ISKVY E +V D
Sbjct: 331 EDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVTKLISKVYGGEIIVRD 390
Query: 335 RNRFHHFKNGSCSCKDFW 352
RNRFHHF++G CSC DFW
Sbjct: 391 RNRFHHFEDGECSCLDFW 408
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/398 (37%), Positives = 221/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGM-------W----LH 49
Y + EAL LF +Q +G+ D + L ACT LGAL++G W +
Sbjct: 727 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDN 786
Query: 50 PYIMKKNIEVDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
P + I++ G M KD++ A+I+ L M G A +M+
Sbjct: 787 PVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEK 846
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVK + TF+G+L +C+H GL+ + +F+ M++ Y I P IEHYGC+V +L RAG +
Sbjct: 847 SGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQ 906
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +L+ +MPM + +LG LLG C+IH N E AE +QL+ L P N G+YV+LSN YS
Sbjct: 907 EAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYS 966
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
+ +W+ ++R M + ++K P C +E +G VHEF
Sbjct: 967 NRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGL 1026
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P V+FD+++EEKE L H+EKLAI F L+ PG IR+ KNLRVC+D
Sbjct: 1027 EMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSD 1086
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA ++S++ +RE +V D NRFH F++GSCSC D+W
Sbjct: 1087 CHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1124
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVG--MWLHP-------- 50
Y++ EA+ + R G+ D T V +L AC + L G +W
Sbjct: 626 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQS 685
Query: 51 -YIMKKNIEVDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
++ +++ V G M KD + A++ A G +AL+ F MQ
Sbjct: 686 VFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQA 745
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
G+KPD G L AC+ G +D
Sbjct: 746 EGMKPDCYAVAGALSACTRLGALD 769
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/393 (38%), Positives = 226/393 (57%), Gaps = 48/393 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEAL LFR++Q +G+ + VT S+L A + L AL G +H ++++ V L +L
Sbjct: 246 EEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSL 305
Query: 68 KDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIRG-VKPD 104
D+ ++ A++V + G + LE F M+ VKPD
Sbjct: 306 IDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPD 365
Query: 105 AITFVGVLVACSHAGLVDERISHF-NLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
+IT++ VL CSH L D + F N+++ K GI P I HYGC+V +LGRAGR+ +A +
Sbjct: 366 SITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDF 425
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
IK MP + G LLG+CR+H ++E Q+LLEL P+N G+YVILSN Y+S+ KW
Sbjct: 426 IKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKW 485
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVH------------------------EFVKA 259
+ ++ IR+LM E+ + K PG +E+D +VH +F +
Sbjct: 486 EDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVANKVKELSIKFKED 545
Query: 260 GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
G+VP+ S VL+D+DEE+KE L H+EKLA+ FGL++ G IR+IKNLR+C DCH+
Sbjct: 546 GYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFA 605
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+S++Y R ++ D+NRFH+ G CSC D+W
Sbjct: 606 KFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 638
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 25/183 (13%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LF E+ + T ++L +C E G +H +K+N E + +G +L
Sbjct: 146 EALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLL 205
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+DV+ TA+I A G +AL+ F ++QI G+ +++
Sbjct: 206 DMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSV 265
Query: 107 TFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
T+ VL A S A L + H +++ + G + L+ + + G + A +
Sbjct: 266 TYASVLTALSGLAALNHGKQVHSHVL--RSGQYSYVVLLNSLIDMYSKCGNVCYARRIFD 323
Query: 166 NMP 168
+MP
Sbjct: 324 SMP 326
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/396 (38%), Positives = 224/396 (56%), Gaps = 44/396 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------ 54
+ ++S + AL LF+ ++ G ++ T+ S+L ACT L LE+GM H +I+K
Sbjct: 235 FAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLI 294
Query: 55 -KNIEVD-------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG 100
N VD V M +DV+T + +I LA G +AL+ F M+ G
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSG 354
Query: 101 VKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA 160
KP+ IT VGVL ACSHAGL+++ +F M + YGI P EHYGC++ +LG+AG++ A
Sbjct: 355 TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDA 414
Query: 161 EELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSS 220
+L+ M D LLGACR+ N+ AE AA++++ L P++ G+Y +LSN Y++S
Sbjct: 415 VKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANS 474
Query: 221 RKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA--------------------- 259
+KW V+ IR M +R IKK PGC IEV+ +H F+
Sbjct: 475 QKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRL 534
Query: 260 ---GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCH 316
G+VP + VL D++ E+ E +L H+EKLA+ FGL++ +IRI KNLR+C DCH
Sbjct: 535 TGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCH 594
Query: 317 TATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ SK+ R V+ D R+HHF++G CSC D+W
Sbjct: 595 VFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 217/390 (55%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LFRE+Q G+ + VT+ S+L AC ++ AL G H + ++ ++ +V +G AL
Sbjct: 371 EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALI 430
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
K+++ +L+ +M G+ + + F + +KPD I
Sbjct: 431 DMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFI 490
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
+F +L AC GL DE +F +MSE+YGI+P +EHY C+V +LGRAG++ +A +LIK
Sbjct: 491 SFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKE 550
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP D V G LL +CR+ +N++ AE AA++L L P+N G+YV+LSN Y++ W +V
Sbjct: 551 MPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEV 610
Query: 227 KRIRELMAERNIKKPPGCILIEV------------------------DGVVHEFVKAGFV 262
IR M +KK PGC I+V D + E K+G
Sbjct: 611 DSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHR 670
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
PN L D++E+E+E L H+EKLA+ FGL++ G +++IKNLR+C DCH I
Sbjct: 671 PNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFI 730
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S RE + D NRFHHFK+G CSC DFW
Sbjct: 731 SSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 86/181 (47%), Gaps = 21/181 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+EA+++F+++ H G D+VT+ S+L + L +G +H Y++K+ + L
Sbjct: 234 KEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGL---------L 284
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYF--YEMQIRGVKPDAITFVGVLVACSHAGLVDERI 125
KD ++A+I + G + F +EM GV IT S GLVD+ +
Sbjct: 285 KDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYIT------GLSRNGLVDKAL 338
Query: 126 SHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMA---LDHFVLGGLLGA 182
F L E+ + ++ + ++ + G+ +A EL + M +A +H + +L A
Sbjct: 339 EMFELFKEQT-MELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPA 397
Query: 183 C 183
C
Sbjct: 398 C 398
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSH-AGLVDERISH 127
+V++ T++I A G+ +ALE F EMQ+ GVKP+ +T +L AC + A L R +H
Sbjct: 352 NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTH 411
Query: 128 FNLMSEKYGIRPSI---EHYG-CLVYILGRAGRIAKAEELIKNMP 168
+ +R + H G L+ + + GRI ++ + MP
Sbjct: 412 ------GFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP 450
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/366 (40%), Positives = 215/366 (58%), Gaps = 48/366 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y + +EALLLF+E+ G T + VTM+S+L AC HLGA+++G W+H YI K+
Sbjct: 299 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVA 358
Query: 56 -----------------NIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+IE V + K + + A+I AM G+ + + + F M
Sbjct: 359 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRM 418
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ G++PD ITFVG+L ACSH+G++D F M++ Y + P +EHYGC++ +LG +G
Sbjct: 419 RKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGL 478
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+AEE+I M M D + LL AC++H N+E E AQ L+++ P+N GSYV+LSN
Sbjct: 479 FKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNI 538
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+++ +W +V R L+ ++ +KK PGC IE+D VVHEF+
Sbjct: 539 YATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEM 598
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+AGFVP+ SEVL +M+EE KE AL H+EKLAI FGL+S PG + I+KNLRVC
Sbjct: 599 EVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVC 658
Query: 313 NDCHTA 318
+CH A
Sbjct: 659 RNCHEA 664
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 23/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN---- 56
Y E +EAL LF+++ + D+ TMV+++ AC G++E+G +H +I
Sbjct: 198 YAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSN 257
Query: 57 ----------------IEVDVGL--GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+E GL G+ KDV++ LI +AL F EM
Sbjct: 258 LKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 317
Query: 99 RGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G P+ +T + +L AC+H G +D R H + G+ + L+ + + G I
Sbjct: 318 SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDI 377
Query: 158 AKAEELIKNM 167
A ++ ++
Sbjct: 378 EAAHQVFNSI 387
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 18/168 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ E+A +F E H+ D V+ +L+ G +E + I
Sbjct: 136 YVQNGRLEDAHKVFDESPHR----DVVSYTALIKGYASRGYIENAQKMFDEI-------- 183
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+KDV++ A+I A G +ALE F +M V+PD T V V+ AC+ +G
Sbjct: 184 -----PVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 238
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
+ E + + +G +++ L+ + + G + A L + +P
Sbjct: 239 I-ELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLP 285
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 215/398 (54%), Gaps = 49/398 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EA+LLFR +Q +G+ DK+T + L + G H + ++ D
Sbjct: 714 YAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSD 773
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + L V+ L A+I LA G +A++ F++MQ
Sbjct: 774 VSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQ 833
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+PD T V ++ AC HAG+V+E S F M E +GI P++EHY C V +LGRAG++
Sbjct: 834 EGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLE 893
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
AE++I+ MP + V LLG C++ + E ER AQ++LEL P N ++V+LSN Y
Sbjct: 894 HAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYC 953
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ KWK R+ + ++N+K PG +E+ VHEFV
Sbjct: 954 ATGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKLEL 1013
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+ +K D ++E KE AL H+E++AI FGL++ P ++I+KNLRVC D
Sbjct: 1014 LMRRAGYEADKG---LDAEDELKEKALGYHSERIAIAFGLIATPPDTTLKIVKNLRVCGD 1070
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTAT IS + RE +V D RFHHF NG+CSCKD W
Sbjct: 1071 CHTATKYISMIMGREIIVRDSLRFHHFSNGTCSCKDCW 1108
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----- 67
LFR +Q +G+ DK T+ + L C L +G +H + + +E D+ + AL
Sbjct: 625 LFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYS 684
Query: 68 -----------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVG 110
+D+++ + A G +A+ F MQ+ GVKPD +TF
Sbjct: 685 NCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFST 744
Query: 111 VLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
L + LV + F+ ++ + G+ + LV + + G++ +A L +
Sbjct: 745 TLNVSGGSALVSDG-KLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFR 798
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/299 (19%), Positives = 121/299 (40%), Gaps = 38/299 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
+AL +FRE+ + L + +T ++ L ACT +L G WLH + + + D G AL
Sbjct: 216 DALRIFREMLLQPLAPNVITFITALGACT---SLRDGTWLHSLLHEAGLGFDPLAGNALI 272
Query: 68 ------------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
D+++ A+I G+ A+ F +++ G++P
Sbjct: 273 NMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRP 332
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
+++T + +L A + +G+ F+ + G + ++ + + G + A +
Sbjct: 333 NSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTV 392
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNL-EAAERAAQQLLELLPDNGGSYVILSNRYSSSRK 222
+ + D +LGA + + LL + N S++ + N S+S
Sbjct: 393 FRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEA 452
Query: 223 WKKVKRIRELMAERN---IKKPPGCILIEVDGVVHEFVKAGFV------PNKSEVLFDM 272
++I L+ R ++ +L+ + G +A V P++S V +++
Sbjct: 453 LDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNV 511
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/398 (37%), Positives = 221/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGM-------W----LH 49
Y + EAL LF +Q +G+ D + L ACT LGAL++G W +
Sbjct: 703 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDN 762
Query: 50 PYIMKKNIEVDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
P + I++ G M KD++ A+I+ L M G A +M+
Sbjct: 763 PVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEK 822
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVK + TF+G+L +C+H GL+ + +F+ M++ Y I P IEHYGC+V +L RAG +
Sbjct: 823 SGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQ 882
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +L+ +MPM + +LG LLG C+IH N E AE +QL+ L P N G+YV+LSN YS
Sbjct: 883 EAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYS 942
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
+ +W+ ++R M + ++K P C +E +G VHEF
Sbjct: 943 NRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGL 1002
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P V+FD+++EEKE L H+EKLAI F L+ PG IR+ KNLRVC+D
Sbjct: 1003 EMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSD 1062
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA ++S++ +RE +V D NRFH F++GSCSC D+W
Sbjct: 1063 CHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1100
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVG--MWLHP-------- 50
Y++ EA+ + R G+ D T V +L AC + L G +W
Sbjct: 602 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQS 661
Query: 51 -YIMKKNIEVDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
++ +++ V G M KD + A++ A G +AL+ F MQ
Sbjct: 662 VFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQA 721
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
G+KPD G L AC+ G +D
Sbjct: 722 EGMKPDCYAVAGALSACTRLGALD 745
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 227/398 (57%), Gaps = 47/398 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLT-GDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
V+ +AL LF E++ +G++ D + + S++ AC + E+G +H ++ E
Sbjct: 219 VQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVITLGYESC 278
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL KDV++ T++IV A G +AL + +M +
Sbjct: 279 LFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVL 338
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVKP+ +TFVG++ ACSH GLV + + F M E +GIRPS++HY CL+ + R+G +
Sbjct: 339 AGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLD 398
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE LI+ MP+ D LL AC+ H N + A R A LL+L P++ SY++LSN Y+
Sbjct: 399 EAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKPEDPSSYILLSNIYA 458
Query: 219 SSRKWKKVKRIRELMAERNIKKPPG--CILI------------------EVDGVV----H 254
+ W+ V +R+LMA + +KK PG C+ + E+ G++
Sbjct: 459 GAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGREFQVFHAGEASQPMKDEILGLMTKLDS 518
Query: 255 EFVKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
E + G+VP+ S VL DMD++EKE L H+E+LA+ +GL+ +PG IRI+KNLRVC D
Sbjct: 519 EMRRRGYVPDTSSVLLDMDQQEKERQLFWHSERLALAYGLLKAVPGTTIRIVKNLRVCGD 578
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHT +IS + +RE V D R+HHFK+G CSC DFW
Sbjct: 579 CHTVLKLISAITSREIYVRDVKRYHHFKDGKCSCNDFW 616
>gi|242045040|ref|XP_002460391.1| hypothetical protein SORBIDRAFT_02g027420 [Sorghum bicolor]
gi|241923768|gb|EER96912.1| hypothetical protein SORBIDRAFT_02g027420 [Sorghum bicolor]
Length = 573
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/374 (38%), Positives = 214/374 (57%), Gaps = 49/374 (13%)
Query: 8 EEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMA 66
+EA+ +FRE + + D+VT+VS++ A +LGAL G+W H Y+++K +EV+ L A
Sbjct: 194 DEAIAVFREMLASQECQPDRVTLVSVVSAIAYLGALAQGLWAHAYVIRKGVEVEEKLSSA 253
Query: 67 L-----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
L + + T A++ G +AL F M+ G+ P
Sbjct: 254 LINMYSKCGFLEGAVYVFDNVRGKRSLDTWNAMLAGFTANGCSGRALALFTRMETTGLMP 313
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
+ ITF +L ACSH GLV+E + F MS YGI P I HYGC+V + RAG KAEE+
Sbjct: 314 NKITFNCILNACSHGGLVEEGMRCFQRMSRVYGIEPDIAHYGCMVDLFCRAGMFEKAEEI 373
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
I+ MPM D +L LLGACR H NLE ++A +L+E P++ YV+LSN Y+ W
Sbjct: 374 IQIMPMEPDASMLKALLGACRTHKNLELGKKAGHRLIEAAPNDHAGYVLLSNIYALDGNW 433
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KA 259
+V ++R+LM +R + K PG +E++GV+HEF+ A
Sbjct: 434 GRVHKVRKLMLDRGVLKTPGSSSVELNGVIHEFISGDKSHSRKRDIYKMLDEICQQLKSA 493
Query: 260 GFVPNKSEVLFDMDEEE-KETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTA 318
G+ P+ S+VL D+D+E+ KE++L +H+EKLAI FGL+S PG IR++ NLR+C DCH A
Sbjct: 494 GYTPDTSQVLLDIDDEDVKESSLAVHSEKLAIAFGLISTAPGTPIRVVNNLRICGDCHNA 553
Query: 319 TNIISKVYNRETVV 332
++SK+Y R +
Sbjct: 554 IKLLSKIYGRNPLT 567
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 219/391 (56%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVG----- 62
EE L + ++ G DK+T VS++ +C+ L L G +H ++K + V
Sbjct: 267 EEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSL 326
Query: 63 ---------LGMALK--------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
L +LK DV+ +++I G+G +A++ F +M+ ++ +
Sbjct: 327 ISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEAND 386
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TF+ +L ACSH GL ++ I F+LM EKYG++P +EHY C+V +LGR G + +AE LI+
Sbjct: 387 VTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIR 446
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MP+ D LL AC+IH E A R ++++ L P + YV+LSN ++S ++W
Sbjct: 447 SMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDD 506
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
V +R+ M +R +KK PG +EV +H+F K G+
Sbjct: 507 VSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPKSVEIASYLRELTSEMKKRGY 566
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ VL DMD E+KE +L H+EKLAI F L+ G IR+IKNLRVC+DCH A
Sbjct: 567 VPDIDSVLHDMDVEDKEYSLVHHSEKLAIAFALLYTPVGTPIRVIKNLRVCSDCHVAIKY 626
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS++ NRE +V D +RFHHFKNG CSC D+W
Sbjct: 627 ISEISNREIIVRDSSRFHHFKNGRCSCGDYW 657
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 22/131 (16%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV------ 61
EE L LF + G D+ + S+L C L AL G +H Y+ K E ++
Sbjct: 166 EEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSL 225
Query: 62 --------GLG--------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
LG M ++V+ LI A G + L+ + M++ G +PD
Sbjct: 226 AHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDK 285
Query: 106 ITFVGVLVACS 116
ITFV V+ +CS
Sbjct: 286 ITFVSVISSCS 296
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 157/399 (39%), Positives = 229/399 (57%), Gaps = 52/399 (13%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ A+ LF+E + K LT D+VTMVS++ AC HLGALE+G W+ ++ + I++
Sbjct: 368 YAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKL 427
Query: 60 DVG----------------------LGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ MA +DV++ LI A G G +A+ M+
Sbjct: 428 SISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMK 487
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G++PD +TF+GVL ACSHAGL++E F + + P+I+HY C+V +LGR G +
Sbjct: 488 EGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-----PAIDHYACMVDLLGRVGEL 542
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
A+ ++ MPM V G LL A RIH +E E AA +L EL PDN G++++LSN Y
Sbjct: 543 EDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIY 602
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+S+ +WK V+RIRE M + +KK G +E G +H+F+
Sbjct: 603 ASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELR 662
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+AG++ +KS VL D++EEEKE + H+EKLAI + L+ G +IR++KNLRVC
Sbjct: 663 KKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCW 722
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTA +ISK+ R +V D NRFH F +G CSCKD+W
Sbjct: 723 DCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 761
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEM-QIRGVKPDAITFVGVLVACSHAGLVDE 123
M ++V+T ++I A GQ A+E F EM + + PD +T V V+ AC H G ++
Sbjct: 353 MPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALEL 412
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
++E I+ SI + ++++ R G + A+ + + M
Sbjct: 413 GNWVVRFLTENQ-IKLSISGHNAMIFMYSRCGSMEDAKRVFQEM 455
>gi|297728815|ref|NP_001176771.1| Os12g0128300 [Oryza sativa Japonica Group]
gi|255670010|dbj|BAH95499.1| Os12g0128300 [Oryza sativa Japonica Group]
Length = 587
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 141/376 (37%), Positives = 218/376 (57%), Gaps = 28/376 (7%)
Query: 5 SACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMW----LHPYIMKKNIEVD 60
SA + L LF + + +++T+V+++ AC LGA+ G+W ++ + ++
Sbjct: 212 SAADAILELFVRMLSLAIEPNEITLVAVIGACGELGAVSHGVWALVEMYAGCGRLDLAEQ 271
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
V + +D A++ LA+ G G AL M GV D +T + V+ AC+HAGL
Sbjct: 272 VFAAASDRDTRCYNAMLHGLAVHGHGRAALSLLDRMHGAGVPVDGVTVLSVMCACAHAGL 331
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLL 180
VDE + +F+ M ++GI P IEHYGC++ +L RAGR+ AE+LI M + + + L+
Sbjct: 332 VDEGLDYFDRMEIEFGIEPRIEHYGCMIDMLSRAGRLNNAEKLIHEMLIVPNAAIYRSLI 391
Query: 181 GACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKK 240
AC IH LE E+ +L+ L PD+ G++V++SN Y+ + +W+ K+ R+ M I K
Sbjct: 392 RACGIHGKLELGEKMIAELMRLEPDDSGNHVLISNFYARTNRWEDAKKARKEMKSMGIDK 451
Query: 241 PPGCILIEVDGVVHEF------------------------VKAGFVPNKSEVLFDMDEEE 276
PG L++++GV+HEF ++ G + S LFD++EE+
Sbjct: 452 NPGSSLVDINGVLHEFLVGDKTHPASKEIYTMVEEIETRLIECGRRSSTSSALFDVEEED 511
Query: 277 KETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRN 336
K L+ H+E+LAI F L++ PG IRIIKNLRVC DCH + ++S+VY RE V+ DR
Sbjct: 512 KADTLSYHSERLAIAFALIASNPGAPIRIIKNLRVCADCHESAKLVSRVYGREIVMRDRT 571
Query: 337 RFHHFKNGSCSCKDFW 352
RFHHF++G CSC DFW
Sbjct: 572 RFHHFRDGVCSCGDFW 587
>gi|242061934|ref|XP_002452256.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
gi|241932087|gb|EES05232.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
Length = 590
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/395 (39%), Positives = 218/395 (55%), Gaps = 51/395 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK-------NIEVD 60
EAL +F ++ G D V +VS+L C HLGALE G W+H ++ + N+ ++
Sbjct: 197 SEALRVFDQMTGNGFKPDAVVLVSVLKTCAHLGALERGRWVHRFLKAERLGGRPGNVMLE 256
Query: 61 VGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVK 102
L G+ DV+ A+I LAM G G +ALE F M +G
Sbjct: 257 TALVDMYCKCGCMNEAWWVFDGVQSHDVVLWNAMIGGLAMNGHGKRALELFRRMLDKGFV 316
Query: 103 PDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE 162
P+ TFV L AC H G VDE F M + +GI P EHYGCL +LGRAG + +AE
Sbjct: 317 PNESTFVVALCACIHTGRVDEGEDVFRSMRD-HGIEPRREHYGCLADLLGRAGLLEEAEG 375
Query: 163 LIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRK 222
++ +MPM G L+ +C +H+N+ ER ++L+EL PD+GG YV L N Y+ +
Sbjct: 376 VLLDMPMEPHASQWGALMSSCLMHNNVGVGERVGKKLIELEPDDGGRYVALFNLYAVNGL 435
Query: 223 WKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA----------------------- 259
W+ K +R++M ER KK G IE +G+VHEF
Sbjct: 436 WEDAKALRKMMEERGAKKETGLSFIEWNGLVHEFRSGDTRHPQTRLIYALLEDMEQRLQL 495
Query: 260 -GFVPNKSEVLFDMD-EEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHT 317
G+V + S+VL DMD EE+K L+ H+E+LA+ FG+++ + IRI+KNLRVC DCH
Sbjct: 496 IGYVKDTSQVLLDMDNEEDKGNTLSYHSERLALAFGILNIPHDMPIRIVKNLRVCRDCHV 555
Query: 318 ATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
++SK+Y RE +V DR+RFH F++G CSC DFW
Sbjct: 556 HAKLVSKLYQREIIVRDRHRFHLFRDGVCSCNDFW 590
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 60 DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
+V + M + +++ +A+I G+ ++AL F +M G KPDA+ V VL C+H G
Sbjct: 170 EVFVRMPERGLVSWSAMIDACVRTGEFSEALRVFDQMTGNGFKPDAVVLVSVLKTCAHLG 229
Query: 120 LVDE-RISHFNLMSEKYGIRPS 140
++ R H L +E+ G RP
Sbjct: 230 ALERGRWVHRFLKAERLGGRPG 251
>gi|297837569|ref|XP_002886666.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
gi|297332507|gb|EFH62925.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/396 (37%), Positives = 230/396 (58%), Gaps = 53/396 (13%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL---- 63
+ AL LFR++Q K D TM S+L AC LG+L +G W H ++++ N +VDV +
Sbjct: 215 DSALQLFRDMQ-KSFEPDGYTMQSVLSACAGLGSLSLGTWSHVFLLR-NCDVDVAMDVLI 272
Query: 64 ----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG- 100
GM D+ + A+I+ A G+ +A+ F M G
Sbjct: 273 KNSLIEMYCKCGSLRMAEQVFQGMRKHDLASWNAMILGFATHGKAEEAMNCFDCMVKEGK 332
Query: 101 -VKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
VKP+++TFV +L+AC+H G+V++ +F++M +YGI P++EHYGC++ +L RAG I +
Sbjct: 333 NVKPNSVTFVALLIACNHRGMVNKGRQYFDMMVREYGIEPALEHYGCIIDLLARAGYITE 392
Query: 160 AEELIKNMPMALDHFVLGGLLGAC-RIHDNLEAAERAAQQLLELLPDN-------GGSYV 211
A +++ +MPM D + LL AC + ++E +E A+ ++ + DN G+YV
Sbjct: 393 AIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTMEDNQSSNSNCSGAYV 452
Query: 212 ILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFD 271
+LS Y+S+ +W V +R+LM++ I+K PGC IE++G+ +EF +++ ++
Sbjct: 453 LLSRVYASANRWNDVGIVRKLMSDHGIRKEPGCSSIEINGISNEFFAGDTSHPQTKQIYQ 512
Query: 272 M---------------DEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCH 316
++ KE +L LH+E+LAI FGL+S P IRI KNLRVC+DCH
Sbjct: 513 QLKVIDDRLRSIVDATNDSSKEYSLRLHSERLAIAFGLISLPPQTPIRIFKNLRVCSDCH 572
Query: 317 TATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
T +ISKV+N E +V DR RFHHFK+GSCSC D+W
Sbjct: 573 EVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 608
>gi|449494077|ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/400 (36%), Positives = 237/400 (59%), Gaps = 50/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKG-LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
+ + S +A++ F+ ++ G L + VT+ LLAC+ LGAL+ G +H YI+++ ++
Sbjct: 179 FAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLDS 238
Query: 60 DVGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+V + + K ++T +I+ AM G G+KAL+ F ++
Sbjct: 239 NVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKL 298
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
G+ PDA++++ VL AC+HAGLV++ + FN M+++ G+ P+I+HYG +V +LGRAGR
Sbjct: 299 GRSGMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQR-GLEPNIKHYGSMVDLLGRAGR 357
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A +++ ++P + + LLGACR + ++E AE A+++L+E+ + G +V+LSN
Sbjct: 358 LKEAYDIVSSLPFP-NMVLWQTLLGACRTYGDVEMAELASRKLVEMGFISCGXFVLLSNV 416
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA----------------- 259
Y++ ++W V R+R+ M R++KK PG IE+ G +++FV
Sbjct: 417 YAARQRWDDVGRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEI 476
Query: 260 -------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
G+ + S VL D+ +E+KE AL H+EKLA+ FGL G I++IKNLR+C
Sbjct: 477 NLRIKAYGYSADTSNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRIC 536
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH +ISK+Y RE +V DR RFH FK G CSCKD+W
Sbjct: 537 GDCHVVIKLISKIYIREIIVRDRTRFHRFKEGLCSCKDYW 576
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----------------- 67
D +T L AC A + LH +++ DV L L
Sbjct: 102 DALTCSFALKACARALARSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLF 161
Query: 68 -----KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG-VKPDAITFVGVLVACSHAGLV 121
D+ + ALI A + A+ F M++ G ++P+A+T G L+ACS G +
Sbjct: 162 DEMPQPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGAL 221
Query: 122 DERIS-HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
E S H ++ EK + +++ ++ + + G + KA + +NM
Sbjct: 222 KEGESVHKYIVEEK--LDSNVQVCNVVIDMYAKCGSMDKAYWVFENM 266
>gi|357125571|ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 600
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/390 (39%), Positives = 222/390 (56%), Gaps = 47/390 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LFR++Q G+ D+VTMVS++ AC GAL++G W+H +I +K I VD+ L AL
Sbjct: 212 EALGLFRDMQAVGVNPDEVTMVSVISACAKAGALDLGKWVHAFIDRKGITVDLELSTALI 271
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+D +A+IV LAM G AL F M V+P+ +
Sbjct: 272 DMYAKCGLIERAKSVFDSMVERDTKAWSAMIVGLAMHGLAEDALGLFSRMLQLKVRPNNV 331
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFVGVL AC+H+GLVD+ ++ M E GI S+E+YGC+V +L R+G + +A +
Sbjct: 332 TFVGVLSACAHSGLVDDGRRYWCTMQE-LGIEASMENYGCMVDLLCRSGLLDEAFSFVTG 390
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP++ + + LL A + + ++ E A+++L EL P N +YV+LSN Y+ + +W +V
Sbjct: 391 MPISPNSVIWRNLLVASKSSNRIDIVELASRRLFELEPQNPENYVLLSNLYALNSQWDRV 450
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------------AGFV 262
+ +R+ M + N+ GC IE++G +H+FV AG
Sbjct: 451 RYMRKKMKDNNVTVVAGCSSIEINGYLHKFVVSDGSHPEIKKIRLVLREIADRVLCAGHK 510
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P + VL D+ EEEKE AL H+E+LAI +GL+ +IR++KNLR C DCH T II
Sbjct: 511 PWTAAVLHDVVEEEKEVALCEHSERLAIAYGLLKTKAPHVIRVVKNLRFCPDCHEVTKII 570
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SK Y RE +V DR RFH F GSCSC DFW
Sbjct: 571 SKSYGREIIVRDRVRFHRFIGGSCSCNDFW 600
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 22/180 (12%)
Query: 9 EALLLFREVQHKGLTG-DKVTMVSLLLACTHLG--------ALEVGMWLHPYIMKKNIEV 59
+ LL+R + H G + T+ +L ACT LG A G+ PY+ + +
Sbjct: 112 DTFLLYRRMLHAGSPAPNSFTLAFVLKACTALGEGQQLHAQAFGHGLEPSPYVQTGLLNL 171
Query: 60 -----DVGLGMAL-------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
+V L + K+++ +++I + G N+AL F +MQ GV PD +T
Sbjct: 172 YARCEEVALARNVFDGMVEDKNLVAWSSMIGGYSRMGMVNEALGLFRDMQAVGVNPDEVT 231
Query: 108 FVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
V V+ AC+ AG +D + ++ GI +E L+ + + G I +A+ + +M
Sbjct: 232 MVSVISACAKAGALDLG-KWVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKSVFDSM 290
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/398 (36%), Positives = 215/398 (54%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + E+AL +F ++ +G+ + T+VS L AC +G LE G+ +H YI + +
Sbjct: 322 FSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLT 381
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG AL K + T T +I A+ G +A+ F +M
Sbjct: 382 EALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMMF 441
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD + F+ +L AC H+G VD ++ F+ M Y I PS++HY +V +LGR+G++
Sbjct: 442 AGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLK 501
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A I+ MPM D + G L ACR H + A+ A +LL+L P + G+Y+ LSN Y+
Sbjct: 502 EALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHTGNYIFLSNAYA 561
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
+ +W+ +R+R LM R + K G IEV+G VH F
Sbjct: 562 ALGQWEDAERVRVLMQNRGVHKNSGWSCIEVEGQVHRFVSGDHDHKDSKAICLKLEEIMA 621
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
VK G++P VL +M++EEKE L H EKLA+ F L+ PG+ IRI+KNL+VC D
Sbjct: 622 GAVKQGYIPGTEWVLHNMEQEEKEDVLGSHGEKLALAFALICTSPGMTIRIVKNLQVCGD 681
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+ SK+ RE ++ D RFHHFK+GSCSC+D W
Sbjct: 682 CHSLMKYASKISQREIMLRDMKRFHHFKDGSCSCRDHW 719
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
M K+V++ T ++ + G KAL F +M GV+P+A T V L AC+ G
Sbjct: 307 MPEKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIG 361
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 15/160 (9%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKD 69
A+ FR + G+ D++T +L + L + E+GM +H I++ IE+D + ++L D
Sbjct: 163 AIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRVSLVD 222
Query: 70 VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLV-ACSHAGLVDERISHF 128
+ V + G A + F E R + VL+ C AG + + + F
Sbjct: 223 ------MYVKVEKLGS---AFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLF 273
Query: 129 NLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
M +K + + L+ + G + +A EL MP
Sbjct: 274 KAMPKKENVS-----WSTLIDGFAKNGDMDRAMELFDQMP 308
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 223/398 (56%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EA+ +F E+ +K + D +++ S + AC +G+LE ++ Y+ + + D
Sbjct: 298 YAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDD 357
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL +DV+ +A+IV + G+ +A+ + M+
Sbjct: 358 VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER 417
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV P+ +TF+G+L+AC+H+G+V E FNLM++ + I P +HY C++ +LGRAG +
Sbjct: 418 GGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMAD-HKINPQQQHYACVIDLLGRAGHLD 476
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E+IK MP+ V G LL AC+ H ++E E AAQQL + P N G YV LSN Y+
Sbjct: 477 QAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYA 536
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
++R W +V +R M E+ + K GC +EV G + F
Sbjct: 537 AARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIES 596
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ GFV NK L D+++EE E L H+E++AI +GL+S G +RI KNLR C +
Sbjct: 597 RLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVN 656
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT +ISK+ +RE VV D NRFHHFK+G CSC D+W
Sbjct: 657 CHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 27/192 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ ++ALL++ +Q ++ D T LL AC+ L L++G ++H + + + D
Sbjct: 94 YSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDAD 153
Query: 61 V------------------------GLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
V GL + + +++ TA++ A G+ +ALE F M
Sbjct: 154 VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHM 213
Query: 97 QIRGVKPDAITFVGVLVACS-HAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
+ VKPD + V VL A + L R H +++ I P + L + + G
Sbjct: 214 RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL--LISLNTMYAKCG 271
Query: 156 RIAKAEELIKNM 167
++A A+ L M
Sbjct: 272 QVATAKILFDKM 283
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 81/182 (44%), Gaps = 23/182 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL +F ++ + D V +VS+L A T L L+ G +H ++K +E++
Sbjct: 197 YAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256
Query: 61 VGLGMALK----------------------DVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L ++L +++ A+I A G +A++ F+EM
Sbjct: 257 PDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN 316
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ V+PD I+ + AC+ G +++ S + + + R + L+ + + G +
Sbjct: 317 KDVRPDTISITSAISACAQVGSLEQARSMYEYVG-RSDYRDDVFISSALIDMFAKCGSVE 375
Query: 159 KA 160
A
Sbjct: 376 GA 377
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 157/399 (39%), Positives = 229/399 (57%), Gaps = 52/399 (13%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ A+ LF+E + K LT D+VTMVS++ AC HLGALE+G W+ ++ + I++
Sbjct: 336 YAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKL 395
Query: 60 DVG----------------------LGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ MA +DV++ LI A G G +A+ M+
Sbjct: 396 SISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMK 455
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G++PD +TF+GVL ACSHAGL++E F + + P+I+HY C+V +LGR G +
Sbjct: 456 EGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-----PAIDHYACMVDLLGRVGEL 510
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
A+ ++ MPM V G LL A RIH +E E AA +L EL PDN G++++LSN Y
Sbjct: 511 EDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIY 570
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+S+ +WK V+RIRE M + +KK G +E G +H+F+
Sbjct: 571 ASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELR 630
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+AG++ +KS VL D++EEEKE + H+EKLAI + L+ G +IR++KNLRVC
Sbjct: 631 KKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCW 690
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTA +ISK+ R +V D NRFH F +G CSCKD+W
Sbjct: 691 DCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 729
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 89/190 (46%), Gaps = 24/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EEAL LF E+ + G+ D+ T V+++ AC+ G + L + +K I+++
Sbjct: 235 YAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLN 294
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM-Q 97
+ AL ++V+T ++I A GQ A+E F EM
Sbjct: 295 CFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMIT 354
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+ + PD +T V V+ AC H G ++ ++E I+ SI + ++++ R G +
Sbjct: 355 AKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQ-IKLSISGHNAMIFMYSRCGSM 413
Query: 158 AKAEELIKNM 167
A+ + + M
Sbjct: 414 EDAKRVFQEM 423
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 219/391 (56%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEAL L+ ++Q + D SLL AC +L A E G LH + +K D+ +L
Sbjct: 468 EEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSL 527
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+ +++ +A+I A G G +AL F +M GV P+
Sbjct: 528 VNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNH 587
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
IT V VL AC+HAGLV+E +F M +GI+P+ EHY C++ +LGR+G++ +A EL+
Sbjct: 588 ITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVN 647
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
++P D FV G LLGA RIH N+E ++AA+ L +L P+ G++V+L+N Y+S+ W+
Sbjct: 648 SIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWEN 707
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
V ++R+ M + +KK PG IE+ V+ F+ KAG+
Sbjct: 708 VAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKAGY 767
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
+ ++D+ EKE L H+EKLA+ FGL++ PG IR+ KNLR+C DCHT
Sbjct: 768 SSIVEIDIHNVDKSEKEKLLYHHSEKLAVAFGLIATPPGGPIRVKKNLRICVDCHTFFKF 827
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ K+ +RE +V D NRFHHFK+GSCSC D+W
Sbjct: 828 VCKIVSREIIVRDINRFHHFKDGSCSCGDYW 858
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 79/182 (43%), Gaps = 23/182 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
+A+ LF ++ + + ++ T+ ++L + L A++V +H +K I D + +L
Sbjct: 368 DAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLL 427
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+D++ T++I + G G +AL+ + +MQ +KPD
Sbjct: 428 DTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPF 487
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
+L AC++ E+ ++ + K+G I LV + + G I A+
Sbjct: 488 ICSSLLNACANLSAY-EQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSE 546
Query: 167 MP 168
+P
Sbjct: 547 IP 548
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 22/142 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ C EA+ LF+E+ G+ ++ ++ +L AC L ++G +H ++K +++D
Sbjct: 158 YVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLD 217
Query: 61 ----------------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +A DV++ A+I + + AL EM+
Sbjct: 218 QFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKG 277
Query: 99 RGVKPDAITFVGVLVACSHAGL 120
G +P+ T L AC+ G
Sbjct: 278 SGTRPNMFTLSSALKACAAMGF 299
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 34/214 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ EEALL+F E+ G+ ++ T S+L AC+ L +G +H + E D
Sbjct: 57 YVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESD 116
Query: 61 -------------VGL---------GMALKDVMTLTALI---VVLAMCGQGNKALEYFYE 95
GL G+ ++V++ AL V +CG+ A+ F E
Sbjct: 117 GFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGE---AVGLFKE 173
Query: 96 MQIRGVKPDAITFVGVLVACS--HAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGR 153
M G+ P+ + +L AC+ G + +I L K G+ LV + +
Sbjct: 174 MVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLML---KMGLDLDQFSANALVDMYSK 230
Query: 154 AGRIAKAEELIKNMPMALDHFVLGGLLGACRIHD 187
AG I A + +++ D ++ C +HD
Sbjct: 231 AGEIEGAVAVFQDIAHP-DVVSWNAIIAGCVLHD 263
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 74/180 (41%), Gaps = 27/180 (15%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD----VGL-- 63
AL+L E++ G + T+ S L AC +G E+G LH ++K + D VGL
Sbjct: 268 ALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVD 327
Query: 64 ----------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
M KD++ ALI + CG A+ F +M + + T
Sbjct: 328 MYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTT 387
Query: 108 FVGVL--VACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
VL VA A V ++I + +S K GI L+ G+ I +A ++ +
Sbjct: 388 LSTVLKSVASLQAIKVCKQI---HTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFE 444
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 143/399 (35%), Positives = 223/399 (55%), Gaps = 48/399 (12%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V+ +AL FRE+ G+ D VT+VS L AC HLG LE G ++ + ++ I+ ++
Sbjct: 212 VQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFAREEGIDSNI 271
Query: 62 GLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ M ++V++ + +I A+ G+ KAL F M+ +
Sbjct: 272 IVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALALFSRMKNQ 331
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLM--SEKYGIRPSIEHYGCLVYILGRAGRI 157
GV+P+ +TF+ VL ACSH G V+E +FN M S+ I+P EHY C+V +LGR+G +
Sbjct: 332 GVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMVDLLGRSGHL 391
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A IK MP+ D + G LLGAC IH N++ + A L EL P+ +V+LSN Y
Sbjct: 392 EEAYNFIKIMPIEADPGIWGALLGACAIHQNIKLGQHVADLLFELAPEIASYHVLLSNMY 451
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVH----------------------- 254
+++ +W V+++R+ M ++ +K +E +G +H
Sbjct: 452 AAAGRWHCVEKVRQRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHPQSASILAKLEDLL 511
Query: 255 -EFVKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ G++P V D+++EEKE+ L+ H+EKLAI F L++ P IR++KNLR+C
Sbjct: 512 KQMKSMGYIPETDSVFHDVEDEEKESTLSTHSEKLAIAFSLINGSPKFPIRVMKNLRICG 571
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHT ++S++ RE ++ D+NRFHHFKNG CSCKDFW
Sbjct: 572 DCHTFCKLVSRITMREIIMRDKNRFHHFKNGICSCKDFW 610
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 27/192 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ ++A+ ++ +++H G+ D T ++ AC L L G+ +H +++K +E
Sbjct: 110 YVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVIKACAELAELWAGLGMHGHVVKHGLEFV 169
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ M +D++ ALI V G +KAL+ F EM +
Sbjct: 170 AAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAWNALIAVCVQTGFSSKALQSFREMGM 229
Query: 99 RGVKPDAITFVGVLVACSHAGLVD--ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
G+KPD++T V L AC H G ++ E I F + + GI +I + + + + G
Sbjct: 230 AGIKPDSVTIVSALSACGHLGCLETGEEIYEF---AREEGIDSNIIVHNARLDMCAKCGD 286
Query: 157 IAKAEELIKNMP 168
+ KA L MP
Sbjct: 287 MDKAMNLFDEMP 298
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 142/398 (35%), Positives = 222/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + E+L LFR + G D+VT +++L AC + AL GM +H Y++KK + +
Sbjct: 339 YARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDAN 398
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL K +++ +A++ + G+G +A+ M+
Sbjct: 399 TIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKA 458
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V PD F +L ACSHAGLV E F M ++Y ++P++ HY C+V +LGRAG +
Sbjct: 459 NSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLD 518
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +I+ M + + LL A R+H N++ AE +AQ++ ++ P SY+ LSN Y+
Sbjct: 519 EAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYA 578
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ ++W V+R+R ++ + +KK PGC IE+D +VH F+
Sbjct: 579 AEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQ 638
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+ P+ S V +D++EE KE L H+E+LAI F L++ PG +IRI KNLRVC D
Sbjct: 639 QLKEAGYKPDTSLVFYDVEEEVKEKMLWDHSERLAIAFALINTGPGTVIRITKNLRVCGD 698
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHT T +IS++ RE ++ D +RFHHF G CSC D+W
Sbjct: 699 CHTVTKLISELTGREIIMRDIHRFHHFIKGFCSCGDYW 736
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 103/246 (41%), Gaps = 41/246 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE-- 58
Y +++ A L+F + GL D T++ LL AC L A++ G +H Y ++ +I
Sbjct: 237 YAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNY 296
Query: 59 ------------------VDVGL---GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
VD + KD ++ ++I+ A G ++L F M
Sbjct: 297 NKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMA 356
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+ G PD +TF+ VL AC + +S + + +K G + LV + + G +
Sbjct: 357 LDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKK-GFDANTIVGTALVDMYSKCGSL 415
Query: 158 AKAEELIKNMP----MALDHFVLG-GLLG----ACRIHDNLEAAERAAQQLLELLPDNGG 208
A + + MP ++ V G GL G A I D ++A ++PDNG
Sbjct: 416 ACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKAN--------SVIPDNGV 467
Query: 209 SYVILS 214
ILS
Sbjct: 468 FTSILS 473
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 29/167 (17%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + ++L+L+RE+ G D T +L AC L +E+G +H ++ +E D
Sbjct: 136 YASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESD 195
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G MA +D+ + +I A A F M
Sbjct: 196 IYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGK 255
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHY 144
G+ D T +G+L AC+ V E ++ H Y +R SI +Y
Sbjct: 256 AGLFADCTTLLGLLSACADLKAVKEGKVIH------GYAVRNSIGNY 296
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/398 (38%), Positives = 216/398 (54%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ EEAL LFR + +G+ D+ T+ S+ AC ++G +E G +H + K ++D
Sbjct: 323 YVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLD 382
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L A+ K++ T+++ A GQG A+E F M
Sbjct: 383 APLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTA 442
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ P+ IT VGVL ACSH GLV E +F M E+YGI PSIEHY C+V + GR+G +
Sbjct: 443 EKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLD 502
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
KA+ I+ + + V LL ACR+H + E A+ A+++L++L + GSYV+LSN Y+
Sbjct: 503 KAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYA 562
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
++ KW +R M ER ++K PG I + VH FV
Sbjct: 563 TNNKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQSAEIYAYLEKLVE 622
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ V+ D+++E++ETAL H+EKLAI FG++S G +RI KNLRVC D
Sbjct: 623 RLKEIGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCED 682
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A IS RE VV D RFHHFK+ SCSC+DFW
Sbjct: 683 CHEAIKYISLATGREIVVRDLYRFHHFKDASCSCEDFW 720
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 145/397 (36%), Positives = 218/397 (54%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
+++ E+AL + +Q+ G +++T+ S+L ACT+L +L G +H YI + D+
Sbjct: 291 MQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDL 350
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
AL +D ++ +I+ +M G G +AL F EM
Sbjct: 351 TTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDS 410
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
GV+P+++TF GVL CSH+ LVDE + F+ MS + + P +H+ C+V +L RAGR+ +
Sbjct: 411 GVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEE 470
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A E IK MP+ G LLG CR++ N+E AA +L E+ DN G+YV+LSN S
Sbjct: 471 AYEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVS 530
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK--------------------- 258
++ W + R+LM +R + K PGC I+V VH FV
Sbjct: 531 AKLWSEASETRKLMRDRGVTKNPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEK 590
Query: 259 ---AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
AG++PN VL D+D+EEKE L H+EKLA+ FG+++ IR+ KNLR+C DC
Sbjct: 591 MRIAGYLPNTDFVLQDVDQEEKEEVLCNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDC 650
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H A ++K+ + +V D RFHHF++G CSC+DFW
Sbjct: 651 HNAIKFMAKIVGVKIIVRDSLRFHHFRDGLCSCQDFW 687
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 67/162 (41%), Gaps = 23/162 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----N 56
YV EAL FR++ G + VT+ S+L ACT L L+ G +H ++++ N
Sbjct: 154 YVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGN 213
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ V L M+ +D ++ LI + + K L F M
Sbjct: 214 VFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMS 273
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPS 140
GV + ++ V+ C G ++ + + M + G +P+
Sbjct: 274 EGVGLNYASWNAVIGGCMQNGRTEKALEVLSRM-QNSGFKPN 314
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 23/131 (17%)
Query: 9 EALLLFREVQHKG-LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EA+ + + +HK + DK+ ++S+ AC L + +H ++ DV LG AL
Sbjct: 60 EAIQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNAL 119
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+DV++ T++ CG +AL F +M + G +P++
Sbjct: 120 IDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNS 179
Query: 106 ITFVGVLVACS 116
+T +L AC+
Sbjct: 180 VTVSSILPACT 190
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 145/398 (36%), Positives = 219/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + CEEAL +F ++ G+ + T S + A + ++ G +H ++K + +
Sbjct: 592 FAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSE 651
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
M K+V++ A+I + G G++A+ F EM+
Sbjct: 652 TEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQ 711
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ P+ +TFVGVL ACSH GLV+E +S+F MS+++G+ P EHY C+V +LGRA +
Sbjct: 712 LGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLC 771
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A E I+ MP+ D + LL AC +H N+E E AA+ LLEL P++ +YV+LSN Y+
Sbjct: 772 CAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYA 831
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S KW R R++M +R +KK PG IEV +H F
Sbjct: 832 VSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNE 891
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G+V ++ +L D+++E+K+ +H+EKLA+ FGL+S + IR+IKNLRVCND
Sbjct: 892 RAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCND 951
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH +SK+ NR VV D RFHHF+ G CSCKD+W
Sbjct: 952 CHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 23/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL LF+E++++G+ D + S + AC + AL G +H D
Sbjct: 491 YTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSED 550
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL KD ++ ALI A G +AL+ F +M
Sbjct: 551 LSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQ 610
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+ + TF + A ++ + + + M K G E L+ + + G I
Sbjct: 611 AGVEANLFTFGSAVSATANTANIKQG-KQIHAMMIKTGYDSETEASNVLITLYSKCGSIE 669
Query: 159 KAEELIKNMP 168
A+ MP
Sbjct: 670 DAKREFFEMP 679
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK-------------- 54
E+ +F ++Q +GL ++ T S+L CT LGAL++G +H ++K
Sbjct: 398 ESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLI 457
Query: 55 ----KNIEVDVGLGMALK----DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
K+ E+D G+ + DV++ TA+I +AL+ F EM+ +G++ D I
Sbjct: 458 DMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNI 517
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA 160
F + AC+ +++ + S G + LV + R GR A
Sbjct: 518 GFSSAISACAGIQALNQG-QQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDA 570
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 22/137 (16%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+ AL LF ++Q + D VT+ SLL AC +GA G LH Y++K + D+ + +L
Sbjct: 296 DRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSL 355
Query: 68 KD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D V+ ++V G +++ F +MQI G+ P+
Sbjct: 356 LDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQ 415
Query: 106 ITFVGVLVACSHAGLVD 122
T+ +L C+ G +D
Sbjct: 416 YTYPSILRTCTSLGALD 432
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 22/134 (16%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+EA+LLF ++ + S+L ACT + ++G LH +I+K + + + AL
Sbjct: 195 DEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNAL 254
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+D ++ +LI LA G ++AL+ F +MQ+ +KPD
Sbjct: 255 VTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDC 314
Query: 106 ITFVGVLVACSHAG 119
+T +L AC+ G
Sbjct: 315 VTVASLLSACASVG 328
>gi|115440653|ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group]
gi|20161481|dbj|BAB90405.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|56785052|dbj|BAD82691.1| PPR repeat containing protein-like [Oryza sativa Japonica Group]
gi|113534137|dbj|BAF06520.1| Os01g0814300 [Oryza sativa Japonica Group]
Length = 604
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 152/390 (38%), Positives = 223/390 (57%), Gaps = 47/390 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LFRE+Q + D+VTMVS++ AC GAL++G W+H +I +K I VD+ L AL
Sbjct: 216 EALGLFREMQAADVNPDEVTMVSVISACAKAGALDLGRWVHAFIDRKGITVDLELSTALI 275
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+D +A+IV LA+ G AL+ F M V+P+ +
Sbjct: 276 DMYAKCGLIERAKGVFDAMAERDTKAWSAMIVGLAIHGLVEVALKLFSRMLELKVRPNNV 335
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF+GVL AC+H+GLV+E +++ M E GI+PS+E+YGC+V + R+ + +A +
Sbjct: 336 TFIGVLSACAHSGLVNEGRRYWSTMQE-LGIKPSMENYGCMVDLFCRSSLLDEAYSFVTG 394
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
M + + + LL A + + + + A+++LLEL P N +YV+LSN Y+S+ +W +V
Sbjct: 395 MAIPPNSVIWRTLLVASKNSNRFDIVQSASKKLLELEPCNPENYVLLSNLYASNSQWDRV 454
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGFV 262
+R+ M E N+ GC IE++G +H+FV +AG
Sbjct: 455 SYMRKKMKENNVNVVAGCSSIEINGYLHKFVVSDDSHPEIKEIRLLLREIADRVVRAGHK 514
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P + VL D+ EEEKE AL H+E+LAI +GL+ +IR++KNLR C DCH I+
Sbjct: 515 PWTAAVLHDVGEEEKEVALCEHSERLAIAYGLLKTKAPHVIRVVKNLRFCPDCHEVAKIV 574
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SK Y+RE +V DR RFH F GSCSCKDFW
Sbjct: 575 SKSYDREIIVRDRVRFHRFVEGSCSCKDFW 604
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 30/225 (13%)
Query: 9 EALLLFREVQHKGLT-GDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE----VDVGL 63
+ +L++R + G + T+ L AC+ + AL G LH ++ +E V GL
Sbjct: 113 DTVLVYRRMLRAGSPLPNSFTLAFALKACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGL 172
Query: 64 ------------------GM-ALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
GM K++ +A+I + G N+AL F EMQ V PD
Sbjct: 173 LNLYAKCEEVALARTVFDGMVGDKNLAAWSAMIGGYSRVGMVNEALGLFREMQAADVNPD 232
Query: 105 AITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
+T V V+ AC+ AG +D R H + ++ GI +E L+ + + G I +A+ +
Sbjct: 233 EVTMVSVISACAKAGALDLGRWVHAFI--DRKGITVDLELSTALIDMYAKCGLIERAKGV 290
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLEL--LPDN 206
M D ++ IH +E A + ++LEL P+N
Sbjct: 291 FDAM-AERDTKAWSAMIVGLAIHGLVEVALKLFSRMLELKVRPNN 334
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 150/401 (37%), Positives = 222/401 (55%), Gaps = 49/401 (12%)
Query: 1 YVEDSACEEALLLFREVQ-HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
YV++ A+ +FRE+ GL D VT +++L AC LG L LH I + +E
Sbjct: 418 YVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELES 477
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+V + L K V++ TA++ + G+ +AL+ F EM
Sbjct: 478 NVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMD 537
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+ GVKPD +T+ +L C+H G +++ +F M+E +G+ P+ +H+ +V +LGR+GR+
Sbjct: 538 LEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRL 597
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
A+EL+++MP D L ACRIH LE E AA+++ EL P + Y+ +SN Y
Sbjct: 598 FDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIY 657
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------- 258
++ W+KV +R+ M ER +KK PG IEVDG +HEF
Sbjct: 658 AAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLH 717
Query: 259 -----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPM-PGVLIRIIKNLRVC 312
AG+VP+ VL D+ E EKET L H+EK+AI FGLVS G IR++KNLRVC
Sbjct: 718 GLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVC 777
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHF-KNGSCSCKDFW 352
+DCHTAT I+++ R+ ++ D NRFH F +G CSC D+W
Sbjct: 778 SDCHTATKFIARIAGRDIILRDCNRFHRFSSDGKCSCGDYW 818
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 91/221 (41%), Gaps = 58/221 (26%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ EAL L++++ +G K T VS+L AC+ + AL G +H +I+++ ++ +
Sbjct: 283 YVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSE 342
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNK---------- 88
V + AL +D + + LI A G G
Sbjct: 343 VAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDR 402
Query: 89 ------------------------ALEYFYEMQ-IRGVKPDAITFVGVLVACSHAGLVDE 123
A++ F EM G+KPDA+TF+ VL AC+ G + E
Sbjct: 403 LGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSE 462
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+ +SE + ++ L+ + R G + +AE L
Sbjct: 463 VKALHAQISESE-LESNVVVTNTLINMYARCGSLEEAERLF 502
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 81/199 (40%), Gaps = 37/199 (18%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----------------- 67
D VT +++L +C+ G + G LH I E D +G AL
Sbjct: 6 DNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 68 -------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
++V++ A+I A G +AL ++ M ++G+ D +TFV VL ACS L
Sbjct: 66 ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS--SL 123
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM---------PMAL 171
R H + S+ + LV + R G + A+ + +++ + L
Sbjct: 124 AQGREIHNRVFYSGLDSFQSLAN--ALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181
Query: 172 DHFVLGGLLGACRIHDNLE 190
H G GA RI ++
Sbjct: 182 AHSQSGDWSGALRIFKEMK 200
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 29/190 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL+L+ + +GL D VT VS+L AC+ L G +H + ++
Sbjct: 85 YAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ---GREIHNRVFYSGLDSF 141
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L AL +D + A+I+ + G + AL F EM+
Sbjct: 142 QSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKC 201
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+KP++ T++ V+ S ++ E R H +++ G + L+ + G+ G
Sbjct: 202 -DMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVAN--GFDSDLVVATALINMYGKCGSS 258
Query: 158 AKAEELIKNM 167
+A E+ M
Sbjct: 259 HEAREVFDKM 268
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHA-GLVDE 123
M +D+++ +I G ++ALE + ++ + G K TFV +L ACS L
Sbjct: 268 MKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQG 327
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGA 182
R+ H +++ G+ + LV + + G + +A ++ M D L+GA
Sbjct: 328 RLVHSHILER--GLDSEVAVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLIGA 383
>gi|449446363|ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 145/400 (36%), Positives = 236/400 (59%), Gaps = 50/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKG-LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
+ + S +A++ F+ ++ G L + VT+ LLAC+ LGAL+ G +H YI+++ +
Sbjct: 179 FAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLNS 238
Query: 60 DVGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+V + + K ++T +I+ AM G G+KAL+ F ++
Sbjct: 239 NVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKL 298
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
G+ PDA++++ VL AC+HAGLV++ + FN M+++ G+ P+I+HYG +V +LGRAGR
Sbjct: 299 GRSGMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQR-GLEPNIKHYGSMVDLLGRAGR 357
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A +++ ++P + + LLGACR + ++E AE A+++L+E+ + G +V+LSN
Sbjct: 358 LKEAYDIVSSLPFP-NMVLWQTLLGACRTYGDVEMAELASRKLVEMGFISCGDFVLLSNV 416
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA----------------- 259
Y++ ++W V R+R+ M R++KK PG IE+ G +++FV
Sbjct: 417 YAARQRWDDVGRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEI 476
Query: 260 -------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
G+ + S VL D+ +E+KE AL H+EKLA+ FGL G I++IKNLR+C
Sbjct: 477 NLRIKAYGYSADTSNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRIC 536
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH +ISK+Y RE +V DR RFH FK G CSCKD+W
Sbjct: 537 GDCHVVIKLISKIYIREIIVRDRTRFHRFKEGLCSCKDYW 576
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----------------- 67
D +T L AC A + LH +++ DV L L
Sbjct: 102 DALTCSFALKACARALARSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLF 161
Query: 68 -----KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG-VKPDAITFVGVLVACSHAGLV 121
D+ + ALI A + A+ F M++ G ++P+A+T G L+ACS G +
Sbjct: 162 DEMPQPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGAL 221
Query: 122 DERIS-HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
E S H ++ EK + +++ ++ + + G + KA + +NM
Sbjct: 222 KEGESVHKYIVEEK--LNSNVQVCNVVIDMYAKCGSMDKAYWVFENM 266
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 216/398 (54%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +E+L L R + GL + T V + A G L G LH Y + E +
Sbjct: 178 YSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESN 237
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL D V++ A+I AM G N+AL+ F EM+
Sbjct: 238 DKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKG 297
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ V PD ITFVGVL ACSH GL++E HF M + I P+++HY C++ +LG GR+
Sbjct: 298 K-VLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLE 356
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI M + D V G LL +C+IH N+E E A ++L+EL PD+GG+YVILSN Y+
Sbjct: 357 EAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYA 416
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ KW V R+R+LM + +KK C IEV VH F+
Sbjct: 417 QAGKWDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGK 476
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+ P V D++++EK ++ H+E+LAI FGL+S G + IIKNLR+C D
Sbjct: 477 LMKEAGYAPQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICED 536
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ISK+ RE + D NR+HHFK+G CSC DFW
Sbjct: 537 CHVAIKFISKITEREITIRDVNRYHHFKDGVCSCGDFW 574
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + E A+ L+ +++ GL DK T +L AC+ L A+E G +H +++ +E D
Sbjct: 77 YAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESD 136
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL +DV+ +++ + GQ +++L M
Sbjct: 137 VFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAF 196
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KP TFV + A + GL+ + + S ++G + + L+ + ++G +
Sbjct: 197 NGLKPTEGTFVISIAASADNGLLPQG-KELHGYSWRHGFESNDKVKTALMDMYAKSGSVN 255
Query: 159 KAEELIK 165
A L +
Sbjct: 256 VARSLFE 262
>gi|302805647|ref|XP_002984574.1| hypothetical protein SELMODRAFT_120669 [Selaginella moellendorffii]
gi|300147556|gb|EFJ14219.1| hypothetical protein SELMODRAFT_120669 [Selaginella moellendorffii]
Length = 369
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 147/369 (39%), Positives = 206/369 (55%), Gaps = 46/369 (12%)
Query: 30 VSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL---------------------- 67
+ +L AC L AL G +H ++ +V + A+
Sbjct: 1 MEVLDACASLAALRDGKRVHAIARDHGVDSEVAVATAIVDMYSKCGCLDEAVEAFARIER 60
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISH 127
D ++ TA++ A G ++AL F MQ +G KP+ +TFV +L ACSH GLV+E +
Sbjct: 61 HDTVSWTAMLAAFAQHGHIDRALATFQRMQEQGHKPNYVTFVHLLSACSHKGLVEEGRKY 120
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHD 187
F+LM+ +YGI P +HY C+V +LGRAG + +AE + MP A VL LL ACR +
Sbjct: 121 FDLMTARYGIAPDAQHYACMVDLLGRAGYLDEAEGFLNRMPGAPHAAVLKSLLSACRSYK 180
Query: 188 NLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILI 247
+++ ER A+++LE D YV+L++ Y ++ KW++ RIR LM ER ++K PG I
Sbjct: 181 DVDRGERIAKRMLESFWDESMPYVVLASIYRAAGKWEEAARIRSLMVERGVRKDPGRSAI 240
Query: 248 EVDGVVHEFV------------------------KAGFVPNKSEVLFDMDEEEKETALNL 283
EV+G V EFV KAG+VP+ S VL D+ EEEKE L
Sbjct: 241 EVEGRVFEFVAGDMSHVQMNPIRAKLQELSSAMKKAGYVPDTSLVLHDVAEEEKEQVLLW 300
Query: 284 HTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKN 343
H+EKLA+ FGL++ G IR+IKNLRVC DCH A +IS + R V D +RFHHF+N
Sbjct: 301 HSEKLAVAFGLLNTPAGSPIRVIKNLRVCKDCHDAAKLISAIEQRRIVFRDLSRFHHFEN 360
Query: 344 GSCSCKDFW 352
G CSC D+W
Sbjct: 361 GVCSCGDYW 369
>gi|225424875|ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Vitis vinifera]
Length = 607
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 157/400 (39%), Positives = 232/400 (58%), Gaps = 58/400 (14%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK------------ 55
+ AL LF E+Q K D T+ S+ AC +G+L +GMW H +++KK
Sbjct: 211 DAALNLFGEMQ-KFFEPDGYTIQSIANACAGMGSLSLGMWAHVFLLKKFDADRVNDVLLN 269
Query: 56 -----------NIEVDVGL--GMALKDVMTLTALIVVLAMCGQGNKALEYFYEM-QIRGV 101
++E+ + L M +DV + ++I+ + G+ ALEYF M + +
Sbjct: 270 TSLVDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKL 329
Query: 102 KPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAE 161
P+AITFVGVL AC+H GLV E +F++M +Y I+P +EHYGCLV +L RAG I +A
Sbjct: 330 MPNAITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEAL 389
Query: 162 ELIKNMPMALDHFVLGGLLGAC-RIHDNLEAAERAAQQLLELLPDNG---GSYVILSNRY 217
+++ NMPM D + LL AC + + +E +E A+++LE + G G YV+LS Y
Sbjct: 390 DVVSNMPMRPDLVIWRSLLDACCKQNAGVELSEEMARRVLE--AEGGVCSGVYVLLSRVY 447
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+S+ +W V +R+LM ++ + K PGC IE+DGV HEF
Sbjct: 448 ASASRWNDVGMVRKLMTDKGVVKEPGCSSIEIDGVAHEFFAGDTSHPQTEEIYSALDVIE 507
Query: 258 ----KAGFVPNKSEV-LFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+ G+ P+ S+ + D + K+ +L LH+E+LAI FGL+ PG+ IRI KNLRVC
Sbjct: 508 ERVERVGYSPDSSQAPMVDETIDGKQYSLRLHSERLAIAFGLLKTKPGMPIRIFKNLRVC 567
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
N+CH T +IS+V+NRE +V DR RFHHFK+G+CSC D+W
Sbjct: 568 NNCHQVTKLISRVFNREIIVRDRIRFHHFKDGACSCMDYW 607
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 23/130 (17%)
Query: 12 LLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG------- 64
L R ++ + DK T +L AC +L AL G +H I+K + DV +
Sbjct: 114 LYHRMLEQGSVMQDKHTFPFVLKACAYLFALSEGEQIHAQILKLGFDSDVYINNSLVHFY 173
Query: 65 ---------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFV 109
M+ + +++ +I G+ + AL F EMQ + +PD T
Sbjct: 174 ATCDRLDFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQ-KFFEPDGYTIQ 232
Query: 110 GVLVACSHAG 119
+ AC+ G
Sbjct: 233 SIANACAGMG 242
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 151/397 (38%), Positives = 218/397 (54%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V++ AL +FR +Q G+ D TM+ +L AC+HL AL+ G H Y++ + D
Sbjct: 389 VQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDT 448
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ AL D+++ A+I+ + G G +AL F+++
Sbjct: 449 LICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLAL 508
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G+KPD ITF+ +L +CSH+GLV E F+ MS + I P +EH C+V ILGRAG I +
Sbjct: 509 GLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDE 568
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A I+NMP D + LL ACRIH N+E E ++++ L P++ G++V+LSN YS+
Sbjct: 569 AHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSA 628
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
+ +W IR + +KK PGC IE++G+VH FV
Sbjct: 629 AGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVE 688
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+ G+ S V D++EEEKE L H+EKLAI FG+++ G I + KNLRVC DC
Sbjct: 689 MKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDC 748
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
HTA ++ + RE V D NRFHHFKNG+C+C DFW
Sbjct: 749 HTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 785
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 83/191 (43%), Gaps = 26/191 (13%)
Query: 1 YVEDSACEEALLLFREVQHK-GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
YV +EAL LF ++ K + VT+ S+L AC L L G LH YI+K +
Sbjct: 286 YVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVL 345
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
D+ LG L KD ++ +A++ G AL F MQ
Sbjct: 346 DILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQ 405
Query: 98 IRGVKPDAITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ G+ PD T +GVL ACSH A L SH L+ + I L+ + + G+
Sbjct: 406 LSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLI--CNALIDMYSKCGK 463
Query: 157 IAKAEELIKNM 167
I+ A E+ M
Sbjct: 464 ISFAREVFNRM 474
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + A+ L+ + H G+ +K T +L AC+ L A+E G+ +H + +E
Sbjct: 84 YAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLE-- 141
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
DV TAL+ A CG +A F M R D + + ++ CS GL
Sbjct: 142 -------SDVFVCTALVDFYAKCGILVEAQRLFSSMSHR----DVVAWNAMIAGCSLYGL 190
Query: 121 VDERISHFNLMSEKYGIRPS 140
D+ + M E+ GI P+
Sbjct: 191 CDDAVQLIMQMQEE-GICPN 209
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 145/399 (36%), Positives = 221/399 (55%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLAC-THLGALEVGMWLHPYIMKKNIEV 59
Y + EEA LF ++ +G+ ++ T S++ AC + A E G H Y +K +
Sbjct: 469 YAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNN 528
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ + AL +D+++ ++I + GQ KALE F EMQ
Sbjct: 529 ALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQ 588
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
R + DA+TF+GV+ AC+HAGLV++ +FN M + I P+++HY C++ + RAG +
Sbjct: 589 KRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGML 648
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA +I MP V LLGA R+H N+E E AA++L+ L P++ +YV+LSN Y
Sbjct: 649 EKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMY 708
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+++ W++ +R+LM +R +KK PG IEV + F+
Sbjct: 709 AAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELS 768
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
AG+ P+ V D+++E+KET L+ H+E+LAI FGL++ P + I+I+KNLRVC
Sbjct: 769 IRLKDAGYQPDTKNVFHDIEDEQKETILSHHSERLAIAFGLIATPPEIPIQIVKNLRVCG 828
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH T ++S V R VV D NRFHHFK+G CSC D+W
Sbjct: 829 DCHNFTKLVSLVEQRYIVVRDSNRFHHFKDGLCSCGDYW 867
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 82/186 (44%), Gaps = 26/186 (13%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
+++ ++A+ LF +++ +G+ + T ++L + E +H ++K N E
Sbjct: 373 LQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSE----MHAEVIKTNYERSS 428
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+G AL KD+M +A++ A G+ +A + F+++
Sbjct: 429 SVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKE 488
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G+KP+ TF V+ AC+ E+ F+ + K + ++ LV + + G I
Sbjct: 489 GIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDS 548
Query: 160 AEELIK 165
A E+ K
Sbjct: 549 AHEVFK 554
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 61/126 (48%), Gaps = 22/126 (17%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE-------------- 58
LF ++Q++G+ ++ T+ +++ A + G + +G+ +H ++K E
Sbjct: 181 LFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYS 240
Query: 59 --------VDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVG 110
DV M ++D +T ++I GQ + E F +MQ+ GVKP +TF
Sbjct: 241 RLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFAS 300
Query: 111 VLVACS 116
V+ +C+
Sbjct: 301 VIKSCA 306
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 79/191 (41%), Gaps = 27/191 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALE--VGMWLHPYIMKKNIE 58
Y D +EAL LF + H L D+ T+ + C G+L+ +G +H +K +
Sbjct: 68 YSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICA--GSLDGKLGRQVHCQCVKFGLV 125
Query: 59 VDVGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEM 96
V +G +L D V++ T+L+ + G E F +M
Sbjct: 126 DHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQM 185
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
Q GV P+ T V+ A + G+V + + M K+G +I + L+ + R G
Sbjct: 186 QYEGVLPNRYTVSTVIAALVNEGVVGIGL-QVHAMVVKHGFEEAIPVFNSLISLYSRLGM 244
Query: 157 IAKAEELIKNM 167
+ A ++ M
Sbjct: 245 LRDARDVFDKM 255
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 144/391 (36%), Positives = 216/391 (55%), Gaps = 47/391 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG--- 64
E+AL LF+ + +G + SL AC+ G LE G W+H Y++K ++ G
Sbjct: 235 EKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 294
Query: 65 -------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+A +DV++ +L+ A G GN+A+ +F EM+ G++P+
Sbjct: 295 LDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNE 354
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
I+F+ VL ACSH+GL+DE ++ LM +K GI HY +V +LGRAG + +A I+
Sbjct: 355 ISFLSVLTACSHSGLLDEGWHYYELM-KKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIE 413
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP+ + LL ACR+H N E AA+ + EL PD+ G +VIL N Y+S +W
Sbjct: 414 EMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWND 473
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
R+R+ M E +KK P C +E++ +H FV + G+
Sbjct: 474 AARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGY 533
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ S V+ +D++E+E L H+EK+A+ F L++ PG I I KN+RVC DCH+A +
Sbjct: 534 VPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHSAIKL 593
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SK RE +V D NRFHHFK+G+CSCKD+W
Sbjct: 594 ASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 12/115 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EA+ F E++ G+ ++++ +S+L AC+H G L+ G W + +MKK+
Sbjct: 329 YAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEG-WHYYELMKKD---- 383
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC 115
G+ L+ +T ++ +L G N+AL + EM I +P A + +L AC
Sbjct: 384 ---GIVLEAWHYVT-IVDLLGRAGDLNRALRFIEEMPI---EPTAAIWKALLNAC 431
>gi|222629025|gb|EEE61157.1| hypothetical protein OsJ_15124 [Oryza sativa Japonica Group]
Length = 383
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 149/379 (39%), Positives = 208/379 (54%), Gaps = 47/379 (12%)
Query: 21 GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL------------- 67
G+ D V +V +L A L +L G +H ++++ V+ + +L
Sbjct: 5 GIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYA 64
Query: 68 ---------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHA 118
KDV+ TA+I M G G +A+ F M GV PD ++F+ +L ACSH+
Sbjct: 65 LKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHS 124
Query: 119 GLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGG 178
LVDE + ++M KY ++P EHY C+V +LGR+G+ +A + IK+MP+ V
Sbjct: 125 KLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCA 184
Query: 179 LLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNI 238
LLGACRIH N E A A +LLEL PDN G+YV++SN ++ KW VK IR M E+ +
Sbjct: 185 LLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQGL 244
Query: 239 KKPPGCILIEVDGVVHEFV-------------------------KAGFVPNKSEVLFDMD 273
+K P C IE+ VH F + +V + S VL D+
Sbjct: 245 RKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRREGQYVEDTSFVLHDVS 304
Query: 274 EEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVM 333
EEEK L+ H+E+LAI+FGL+S G +RI KNLRVC DCH T ++SK++ RE VV
Sbjct: 305 EEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHEFTKLVSKLFEREIVVR 364
Query: 334 DRNRFHHFKNGSCSCKDFW 352
D NRFHHF G+CSC DFW
Sbjct: 365 DANRFHHFSGGTCSCGDFW 383
>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
Length = 600
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 150/398 (37%), Positives = 223/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ C++A+ +FR + +G+ D VT ++++ AC L A G +H I I +D
Sbjct: 203 YSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMD 262
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG A+ K+ +T +A++ A G +A+E ++EM
Sbjct: 263 VALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQ 322
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++ + ITF+G+L ACSHAG + + +F M +G+ P EHY L+ +LGR+G++
Sbjct: 323 GGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQ 382
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+E+LI +MP D LLGACR+H +++ R A+ + EL P++ G Y++LSN YS
Sbjct: 383 LSEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYS 442
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S+ + + +R R+ M R I K PG IEV VHEF+
Sbjct: 443 STGRMDEARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIERLKA 502
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+V + VL D++EEEKE L H+E+LAI FGL+S PG + I+KNLRVC D
Sbjct: 503 RVKEAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRVCFD 562
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ISKV R+ VV D RFHHF+NG+CSC D+W
Sbjct: 563 CHAAVKAISKVVGRKIVVRDAIRFHHFENGACSCGDYW 600
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 94/190 (49%), Gaps = 25/190 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +EAL LF+ + +G+ ++VT+++ + AC L + E G +H + K +E D
Sbjct: 102 YTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIVHAIAVDKRLESD 161
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G +L K+++T ++ V + Q KA++ F M +
Sbjct: 162 TMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDL 221
Query: 99 RGVKPDAITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV+PDA+TF+ ++ AC+ A + R+ H ++ + GI + +++ G+ GR+
Sbjct: 222 EGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITAS--GIPMDVALGTAVMHFYGKCGRL 279
Query: 158 AKAEELIKNM 167
A + ++
Sbjct: 280 DNARAIFDSL 289
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 134/309 (43%), Positives = 191/309 (61%), Gaps = 24/309 (7%)
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISH 127
+D ++ T++I+ LA G +ALE F M + G++PD IT+VGV AC+HAGLV++ +
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY 537
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHD 187
F++M + I P++ HY C+V + GRAG + +A+E I+ MP+ D G LL ACR+H
Sbjct: 538 FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHK 597
Query: 188 NLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILI 247
N++ + AA++LL L P+N G+Y L+N YS+ KW++ +IR+ M + +KK G I
Sbjct: 598 NIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
Query: 248 EVDGVVH------------------------EFVKAGFVPNKSEVLFDMDEEEKETALNL 283
EV VH E K G+VP+ + VL D++EE KE L
Sbjct: 658 EVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRH 717
Query: 284 HTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKN 343
H+EKLAI FGL+S +RI+KNLRVCNDCHTA ISK+ RE +V D RFHHFK+
Sbjct: 718 HSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKD 777
Query: 344 GSCSCKDFW 352
G CSC+D+W
Sbjct: 778 GFCSCRDYW 786
>gi|356570245|ref|XP_003553300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g26782, mitochondrial-like [Glycine max]
Length = 555
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 223/398 (56%), Gaps = 51/398 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EA +F ++ G ++ L+ GAL++G +H ++K ++E
Sbjct: 163 YAQNGLSAEAFSVFGDMVKSGNFRYNAVIMDXGLS----GALQLGKCIHHQVIKMDLEDS 218
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G M +K+V + TA++ M G+ +A+E FY+M
Sbjct: 219 VFVGTSIVDIYCKCERVEMARKAFDCMKVKNVKSWTAMVAGYGMHGRAKEAMEIFYKMIR 278
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVKP+ ITFV VL ACSHAG++ E FN M ++ + P IEHY C+V +LGRAG +
Sbjct: 279 SGVKPNYITFVSVLAACSHAGMLKEGXHWFNRMKCEFIVEPGIEHYLCMVDLLGRAGYLX 338
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
LIK M D + G LLGACRIH N+E E +A++L EL N G YV+LSN Y+
Sbjct: 339 -CYGLIKEMNAKPDFIIWGSLLGACRIHKNVELGEISARKLFELDXSNCGYYVLLSNIYA 397
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVH------------------------ 254
+ +W +V+R+R LM R + K PG ++E+ G +H
Sbjct: 398 DAGRWDEVERMRILMKSRGLLKAPGFSIVELKGRIHVLLVGDKEHPQHEKIYEYLDKXNV 457
Query: 255 EFVKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ + G++PN + VL D+DEEEK L +H+EKLA+ FG+++ +PG +I IIKNLR+C D
Sbjct: 458 KLQELGYMPNXNMVLHDVDEEEKGMVLRVHSEKLAVAFGIMNSVPGSIIHIIKNLRICGD 517
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C+ +I KV NRE VV D RFHHFK GSCSC D+W
Sbjct: 518 CNVVIKLIFKVVNREIVVRDSKRFHHFKEGSCSCGDYW 555
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 218/398 (54%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ E+ EA+ ++ ++ KG+ + +TMVSL A +L LE G LH ++K E D
Sbjct: 687 HAENEEPNEAVKAYKLIREKGIPANYITMVSLA-ATANLAVLEEGQQLHGLVIKLGFESD 745
Query: 61 VGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + A D+ ++ LI A G KA E F+EM
Sbjct: 746 LHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLK 805
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G KPD +TFV +L AC+H GLVDE +++++ M+ ++G+ P IEH C++ +LGR+GR++
Sbjct: 806 LGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLS 865
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
AE IK MP+ + LL ACRIH NLE A + A+ LLEL P + +YV+ SN +
Sbjct: 866 HAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCA 925
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
+S KW+ V+ +R+ M NIKK P C +++ VH F
Sbjct: 926 TSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMK 985
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+VP+ S L DMDEE+KE L H+E+LA+ FGL++ +RI KNLRVC D
Sbjct: 986 MTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGD 1045
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+ +S + R+ V+ D RFHHF G CSC D+W
Sbjct: 1046 CHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1083
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 28/192 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGAL-EVGMWLHPYIMKKNIEV 59
YV EEA+ LF ++ G+ + + SL+ AC+ G + + G +H +++K I
Sbjct: 349 YVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILG 408
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
DV +G AL +V++ T+L+V + G + L + M+
Sbjct: 409 DVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMR 468
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSE--KYGIRPSIEHYGCLVYILGRAG 155
GV + TF V +C GL+++++ + ++ +YG S+ L+ +
Sbjct: 469 QEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFS 525
Query: 156 RIAKAEELIKNM 167
+ +A + +M
Sbjct: 526 SVEEACYVFDHM 537
>gi|449435366|ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 273 bits (699), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 152/405 (37%), Positives = 230/405 (56%), Gaps = 54/405 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
YV+ E AL LF E+Q+ D TM S++ AC +GAL +GMW H Y+++K
Sbjct: 202 YVQSGLFENALKLFVEMQN-SFEPDGYTMQSIVSACAGIGALSLGMWAHAYVLRKASGAM 260
Query: 56 --NIEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYE 95
++ ++ L M D+ + ++I+ LAM G+G AL+ F
Sbjct: 261 AGDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNSMILALAMHGRGQAALQCFSR 320
Query: 96 M-QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRA 154
+ ++ P+++TFVGVL AC+H G+V + +F++M Y I P +EHYGCLV +L R+
Sbjct: 321 LVEMEKFLPNSVTFVGVLSACNHGGMVADGRKYFDMMVNDYKIEPRLEHYGCLVDLLSRS 380
Query: 155 GRIAKAEELIKNMPMALDHFVLGGLLGAC-RIHDNLEAAERAAQQLLELLPD-NGGSYVI 212
G I +A EL+ NM + D + LL AC + + +E +E A ++L+ + G YV+
Sbjct: 381 GFIDEALELVANMHIKPDAVIWRSLLDACYKQNAGVELSEEVAFKILQSEKTISSGVYVM 440
Query: 213 LSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------- 257
LS Y+S+R+W V IR++M + + K PGC IE+DG+ HEF
Sbjct: 441 LSRVYASARQWNDVGIIRKVMTDMGVTKEPGCSSIEIDGISHEFFAGDTSHPRIKEIYGV 500
Query: 258 ---------KAGFVPNKSE-VLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIK 307
+ G+ P+ S+ + D + K+ +L LH+E+LAI FGL++ PG +RI K
Sbjct: 501 IDLIEEKLERRGYSPDCSQATMVDEPDNIKQQSLKLHSERLAIAFGLLNLKPGTPVRIFK 560
Query: 308 NLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
NLRVCNDCH T +IS+++N E ++ DRNRFHHFK+G CSC DFW
Sbjct: 561 NLRVCNDCHQVTKLISEIFNVEIIMRDRNRFHHFKHGMCSCMDFW 605
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 8 EEAL-LLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG-- 64
E+A+ + +R ++ + DK T LL AC ++ AL G H I K +++DV +G
Sbjct: 107 EQAIEIFYRMLEEGSVEPDKHTFPFLLKACAYVFALSEGRQAHAQIFKLGLDLDVYVGNS 166
Query: 65 --------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
M L+ +++ +I G AL+ F EMQ +PD
Sbjct: 167 LIHLYASCGCLSMALKVFEKMPLRSLVSWNVMIDAYVQSGLFENALKLFVEMQ-NSFEPD 225
Query: 105 AITFVGVLVACSHAGLVDERI-SHFNLMSEKYG-IRPSIEHYGCLVYILGRAGRIAKAEE 162
T ++ AC+ G + + +H ++ + G + + LV + + G + A++
Sbjct: 226 GYTMQSIVSACAGIGALSLGMWAHAYVLRKASGAMAGDVLINSSLVDMYSKCGSLRMAQQ 285
Query: 163 LIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLEL---LPDN 206
+ + MP D ++ A +H +AA + +L+E+ LP++
Sbjct: 286 VFETMPKH-DLNSWNSMILALAMHGRGQAALQCFSRLVEMEKFLPNS 331
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 273 bits (699), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 214/398 (53%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y +S +E + F ++ + L D+ ++V L +C LGAL++G W I + +
Sbjct: 288 YASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTN 347
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL KD++ + A I LA G + F + +
Sbjct: 348 LFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEK 407
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD TF+G+L C HAGL+ + + FN +S Y ++ ++EHYGC+V + GRAG +
Sbjct: 408 LGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLD 467
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A LI +MPM + V G LL CR+ + + AE ++L+ L P N G+YV LSN YS
Sbjct: 468 DAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYS 527
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
S +W + +R++M + +KK PG IE++G VHEF+
Sbjct: 528 VSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGN 587
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
GFVP V FD+++EEKE L H+EKLA+ FGL+S G +IR++KNLRVC D
Sbjct: 588 EMRLMGFVPTTEFVFFDVEDEEKERVLGHHSEKLAVAFGLISTDHGQVIRVVKNLRVCGD 647
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH +ISK+ RE VV D NRFH F NGSCSC D+W
Sbjct: 648 CHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 23/189 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI----MKKN 56
Y EA+ LF+++ G+ D +V +L AC H+G L+ G W+ ++ M+KN
Sbjct: 187 YTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKN 246
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V L M KD++T + +I A + +E+F +M
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQ 306
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+KPD + VG L +C+ G +D +L+ +++ ++ L+ + + G +A
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLI-DRHEFLTNLFMANALIDMYAKCGAMA 365
Query: 159 KAEELIKNM 167
+ E+ K M
Sbjct: 366 RGFEVFKEM 374
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 77/189 (40%), Gaps = 23/189 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V + E L LF ++ GL T +L ACT ++G+ LH ++K D
Sbjct: 86 FVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHD 145
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +L + V+T TAL G+ +A++ F +M
Sbjct: 146 VAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVE 205
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+PD+ V VL AC H G +D M E + S LV + + G++
Sbjct: 206 MGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVR-TTLVNLYAKCGKME 264
Query: 159 KAEELIKNM 167
KA + +M
Sbjct: 265 KARSVFDSM 273
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 273 bits (699), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 217/399 (54%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
YV++S +AL +F+ V+ + + T+ S+LL C++L AL G +H + MK +
Sbjct: 207 YVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGR 266
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ +G +L KD++ A+I A G G KA++ F +M+
Sbjct: 267 SITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMK 326
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV PD IT + VL AC H GL D I F M E Y I P ++HY C+V +L RAG +
Sbjct: 327 DEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGLL 386
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A +I +MP G LL ACR++ NLE AE AA++L+E P N G+YV L+N Y
Sbjct: 387 ERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIY 446
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF--------------------- 256
+ + +W V R+R M + + K PG +E+ GV HEF
Sbjct: 447 AVANRWDDVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLDLIHDKLDRLG 506
Query: 257 --VKA-GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+KA G+ P+ L D++E K L H+EKLAI FGL+S PG+ +RI KNLR+C
Sbjct: 507 KLMKAMGYSPDLDFALHDVEESLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLRICG 566
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A +ISK+ +RE ++ D RFHHF+ G CSC D+W
Sbjct: 567 DCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 605
>gi|224141427|ref|XP_002324074.1| predicted protein [Populus trichocarpa]
gi|222867076|gb|EEF04207.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 273 bits (699), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 160/409 (39%), Positives = 223/409 (54%), Gaps = 58/409 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTG-DKVTMVSLLLACTHLGALEVGMWLHPYIMK---KN 56
YV + E LL E+ + G + VT+ S+L AC G + +G W+H Y +K +
Sbjct: 229 YVGNGFSREGFLLLDEMVLRFRLGLNFVTLSSILSACAQSGDVLMGRWVHVYALKGMGRE 288
Query: 57 IEVDVG------------LGMALK--------DVMTLTALIVVLAMCGQGNKALEYFYEM 96
+ + VG + MA K +V+ A++ LAM G+G L+ F +M
Sbjct: 289 MHIMVGTALVDMYAKCGPIDMAFKVFKYLPKRNVVAWNAMLGGLAMHGRGKFVLDIFPKM 348
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
I KPD +TF+ VL ACSH+GLVD+ +F + +YG P IEHY C+V ILGRAG
Sbjct: 349 -IEEAKPDDLTFMAVLSACSHSGLVDQGYHYFRSLESEYGTTPKIEHYACMVDILGRAGH 407
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A LIK MPM + VLG LLG+C H L+ ER Q+L+++ N +V+LSN
Sbjct: 408 LEEAVMLIKKMPMCPNEVVLGSLLGSCNAHGKLQLGERILQELIQMDGHNTEYHVLLSNM 467
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------ 258
Y K K +R+++ + I+K PG I V G +H+F
Sbjct: 468 YVLEGKQDKANSLRQILKSKGIRKVPGVSSIYVGGNIHQFSAGDKSHPLTKEIYHALNNM 527
Query: 259 ------AGFVPNKSEVLFDMDE---------EEKETALNLHTEKLAITFGLVSPMPGVLI 303
AG+VPN + +F + EEKE AL LH+EKLA+ FG +S PG +
Sbjct: 528 IQRLRLAGYVPNTTNQVFPGSDGREGSSEEMEEKEQALFLHSEKLAVCFGHISTKPGAPL 587
Query: 304 RIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
I KNLR+C DCH+A I+SK+YNRE V+ DRNRFH FK+GSCSC D+W
Sbjct: 588 YIFKNLRICQDCHSAIKIVSKIYNREIVIRDRNRFHCFKHGSCSCSDYW 636
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E F+E++ +G+ D V M+S+ + CT + L +G ++K +GLG+ +
Sbjct: 104 SEGFFFFKEMRKEGVVLDDVAMISVFVLCTRVEDLGMGRQAQGCLVK------MGLGLGV 157
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISH 127
K A++ + CG + F EM R V + GV+ G+ + R+
Sbjct: 158 K---VCNAIMNMYVKCGLVEEVRRVFCEMNERNVVSWSTLLEGVV---KWEGVENGRVV- 210
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGAC 183
F+ M E+ + +I G + R G + +E++ + L+ L +L AC
Sbjct: 211 FDEMPERNEVGWTIMIAGYVGNGFSREGFLL-LDEMVLRFRLGLNFVTLSSILSAC 265
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 273 bits (699), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 214/398 (53%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEAL +F E++ G + ++ T L C + ALE+G +H +K
Sbjct: 369 YAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTG 428
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL KDV++ ++ A G G +AL F M+
Sbjct: 429 CFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKT 488
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVKPD IT VGVL ACSH GL+D +F M++ YG+ P+ +HY C++ +LGRAGR+
Sbjct: 489 AGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLE 548
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A++LI+NMP G LLGA RIH N E E+AA+ + ++ P N G YV+LSN Y+
Sbjct: 549 EAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYA 608
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+S +W ++R M + ++K PG +EV +H F
Sbjct: 609 ASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDL 668
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G+V VL D++EEEKE L H+EKLA+ FG+++ G IR++KNLRVC D
Sbjct: 669 KMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCED 728
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A ISK+ R ++ D +RFHHF G CSC D+W
Sbjct: 729 CHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 273 bits (699), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 214/398 (53%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEAL +F E++ G + ++ T L C + ALE+G +H +K
Sbjct: 369 YAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTG 428
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL KDV++ ++ A G G +AL F M+
Sbjct: 429 CFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKT 488
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVKPD IT VGVL ACSH GL+D +F M++ YG+ P+ +HY C++ +LGRAGR+
Sbjct: 489 AGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLE 548
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A++LI+NMP G LLGA RIH N E E+AA+ + ++ P N G YV+LSN Y+
Sbjct: 549 EAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYA 608
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+S +W ++R M + ++K PG +EV +H F
Sbjct: 609 ASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDL 668
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G+V VL D++EEEKE L H+EKLA+ FG+++ G IR++KNLRVC D
Sbjct: 669 KMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCED 728
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A ISK+ R ++ D +RFHHF G CSC D+W
Sbjct: 729 CHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 135/324 (41%), Gaps = 80/324 (24%)
Query: 50 PYIMKKNIEVDVGLGMALKDVMTLTALIVVL-----------AMCGQGNKALEYFYEMQI 98
P + KN+ V A+K + + +++L C G+ L++F
Sbjct: 716 PIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYWLQFF----- 770
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
L+ + GL+D +F M+E+Y + P+ +HY C++ +LGR R+
Sbjct: 771 -------------LLVVIYTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLE 817
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+ G LLGA RIH N E E+AAQ ++ P N G
Sbjct: 818 E-----------------GALLGASRIHGNTELGEKAAQMFFKMGPQNSG---------- 850
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFDMDEEE-- 276
+ ++R++ ++K PG EV +H F F+ + E + ++E +
Sbjct: 851 -------ISKMRDV----GVQKVPGYSWFEVQNKIHTFSVGLFLSRERENIGFLEELDLK 899
Query: 277 -------KETALNLHTEKLAITFGLVSPMPGVLIRIIKN-LRVCNDCHTATNIISKVYNR 328
KE L +E LA G+++ G R++K + VC DC +A +SK+ R
Sbjct: 900 MREREEEKERTLKYLSENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGR 959
Query: 329 ETVVMDRNRFHHFKNGSCSCKDFW 352
+ D H F CSC ++W
Sbjct: 960 LITLRDS---HRFNESICSCGEYW 980
>gi|302781198|ref|XP_002972373.1| hypothetical protein SELMODRAFT_97177 [Selaginella moellendorffii]
gi|300159840|gb|EFJ26459.1| hypothetical protein SELMODRAFT_97177 [Selaginella moellendorffii]
Length = 485
Score = 273 bits (699), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 150/391 (38%), Positives = 219/391 (56%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI-EVDVGLGMAL 67
EA F+ ++ +G+ D VT SLL AC++L +L G LH I + + E DV L ++
Sbjct: 95 EAFHFFKLMELQGIHADTVTYASLLDACSNLASLSQGRKLHARIAELGLLEADVVLQTSI 154
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
K+++ +A+I+ A G + AL+ F++M+ G K
Sbjct: 155 LTMYSKCGRLGEARGIFDRIGEKNIVAWSAIIIAYAQNGDCSTALKLFWKMEQAGQKASE 214
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
TFV VL ACSHAGLVD+ +F M + + P HYGC+V +LGRAGR+A AEELI+
Sbjct: 215 TTFVSVLYACSHAGLVDDAYYYFTTMKSERKLEPLPGHYGCIVDLLGRAGRLADAEELIQ 274
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
M + LLGAC+ H +++ AERAA+++ EL P + YV+LSN YS + +W
Sbjct: 275 RMKAPQSGVLWTTLLGACKTHGDMKLAERAAERIRELDPGSATPYVLLSNVYSEAGRWDL 334
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
+R+ M + +KKP G +EV G +HEFV +AG+
Sbjct: 335 AASVRKRMDDMKVKKPAGKSWVEVRGKLHEFVAGDQSHPKIGEIVLELKRLLALIKEAGY 394
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
+KS L + +EEEKE L H+EKLA+ GL+ G ++++KNLRVC+DCHTA
Sbjct: 395 AADKSATLHNAEEEEKEGLLYYHSEKLAMVMGLLHSPRGEPVQVVKNLRVCSDCHTAAKF 454
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISKV +R+ V+ D +FHHF++G CSC D+W
Sbjct: 455 ISKVEDRQIVLRDTKQFHHFEHGRCSCGDYW 485
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 70 VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE------ 123
V++ T LIV G +A +F M+++G+ D +T+ +L ACS+ + +
Sbjct: 77 VVSWTCLIVGCVQLGSYREAFHFFKLMELQGIHADTVTYASLLDACSNLASLSQGRKLHA 136
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA 160
RI+ L+ ++ SI + + + GR+ +A
Sbjct: 137 RIAELGLLEADVVLQTSI------LTMYSKCGRLGEA 167
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 273 bits (698), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 220/399 (55%), Gaps = 48/399 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLH---------PY 51
Y ++ EEA+ +F E+Q G+ D T+ S++ +C +L +LE G H PY
Sbjct: 353 YGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPY 412
Query: 52 IMKKNIEVDVGLG--------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ N V + G M+ D ++ TAL++ A G+ + ++ F +M
Sbjct: 413 VTVSNALVTL-YGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKML 471
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+GVKPD +TF+GVL ACS +GLVD+ S+F+ M + + I P +HY C++ + R+G +
Sbjct: 472 SKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWL 531
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+AEE IK MP D F LL ACR+ ++E + AA+ LL+L P N SYV+L + +
Sbjct: 532 KQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMH 591
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF--------------------- 256
+S +W V ++R M +R +KK PGC I+ VH F
Sbjct: 592 ASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLN 651
Query: 257 ---VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
V+ G+ P+ S VL D+ + EK L+ H+EKLAI FGL+ P + IRI+KNLRVC
Sbjct: 652 SKMVEEGYKPDVSSVLHDVADAEKVHMLSHHSEKLAIAFGLIFVPPEMPIRIVKNLRVCV 711
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH AT ISK+ R+ +V D RFH F NG CSC DFW
Sbjct: 712 DCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 750
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 123/299 (41%), Gaps = 62/299 (20%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EAL +FR ++ +G+ D+ T S+L AC L ALE G +H YI + E +V +G AL
Sbjct: 259 SEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSAL 318
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
K++++ TA+IV G G +A+ F EMQ G+KPD
Sbjct: 319 VDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDD 378
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
T V+ +C++ ++E + F+ ++ G+RP + LV + G+ G I A L
Sbjct: 379 FTLGSVISSCANLASLEEG-AQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFD 437
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
M HD + S+ L Y+ K K+
Sbjct: 438 EMS----------------FHDQV-------------------SWTALVMGYAQFGKAKE 462
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFDMDEEEKETALNLH 284
+ E M + + KP G I GV+ ++G V M ++ L+ H
Sbjct: 463 TIDLFEKMLSKGV-KPDGVTFI---GVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDH 517
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 273 bits (698), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 214/391 (54%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEAL +F E+++ G+ D+ + L A +L LE G LH ++K E D+ + A
Sbjct: 1334 EEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAA 1393
Query: 68 KDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D+ ++ LI A G KA E F+EM G KPD
Sbjct: 1394 MDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDH 1453
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TFV +L AC+H GLVDE +++++ M+ ++G+ P IEH C++ +LGR+GR++ AE IK
Sbjct: 1454 VTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIK 1513
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP+ + LL ACRIH NLE A + A+ LLEL P + +YV+ SN ++S KW+
Sbjct: 1514 EMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWED 1573
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEF------------------------VKAGF 261
V+ +R+ M NIKK P C +++ VH F +AG+
Sbjct: 1574 VENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGY 1633
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ S L DMDEE+KE L H+E+LA+ FGL++ +RI KNLRVC DCH+
Sbjct: 1634 VPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKF 1693
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+S + R+ V+ D RFHHF G CSC D+W
Sbjct: 1694 VSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1724
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 135/257 (52%), Gaps = 22/257 (8%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
+AL LF+E+ + D V + S+L C +L + +G +H + +K DV +G AL
Sbjct: 317 DALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALI 376
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
K+V++ T+LI A G G+ A+ + +M+ +G KP+ +
Sbjct: 377 DMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDV 436
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF+ +L ACSH GL E FN M KY I+P EHY C+V + R G + +A L+
Sbjct: 437 TFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCK 496
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
+ + + + G +LGA I+ + + AA L + P+N +YV+L++ YS++ W
Sbjct: 497 IDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDA 556
Query: 227 KRIRELMAERNIKKPPG 243
+IR+LM ER+ KK G
Sbjct: 557 WKIRKLMEERSTKKNAG 573
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGA-LEVGMWLHPYIMKKNIEV 59
+ E+ EA+ ++ ++ KG+ + +TMVS+L AC+ L+ GM +H +I+ E
Sbjct: 1225 HAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFES 1284
Query: 60 D----------------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
D + G+ K +T A++ A G G +AL+ F EM+
Sbjct: 1285 DDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMR 1344
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV D +F G L A ++ +++E L+ K G + + + G+ G +
Sbjct: 1345 NVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVI-KLGFESDLHVTNAAMDMYGKCGEM 1403
Query: 158 AKAEELIKNMPMALDHFVLGG--LLGACRIHDNLEAAERAAQQLLELLP 204
+++K +P ++ L L+ A H + A ++L+L P
Sbjct: 1404 ---HDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGP 1449
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 25/190 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----KN 56
Y ++ E+A +LF +++H G+ ++ T S L ACT L L++G+ + I K +N
Sbjct: 106 YSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVEN 165
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ V L M +DV++ A+I A+ G + + F M
Sbjct: 166 LFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLR 225
Query: 99 RGVKPDAITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G+ PD T VL A + GL+ H + YG + G L+ + G +
Sbjct: 226 GGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVT--GLLINAYAKNGSL 283
Query: 158 AKAEELIKNM 167
A++L K M
Sbjct: 284 RSAKDLRKGM 293
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 28/192 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGAL-EVGMWLHPYIMKKNIEV 59
YV EEA+ LF ++ G+ + + SL+ AC+ G + + G +H +++K I
Sbjct: 820 YVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILG 879
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
DV +G AL +V++ T+L+V + G + L + M+
Sbjct: 880 DVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMR 939
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSE--KYGIRPSIEHYGCLVYILGRAG 155
GV + TF V +C GL+++++ + ++ +YG S+ L+ +
Sbjct: 940 QEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFS 996
Query: 156 RIAKAEELIKNM 167
+ +A + +M
Sbjct: 997 SVEEACYVFDHM 1008
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 22/138 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTH---------LGALEVGMWLHPY 51
YV+D C + L + E+ G + VT S L AC++ + AL + H +
Sbjct: 1124 YVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDF 1183
Query: 52 IMKKNIEVDV--GLGMALK-----------DVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
++ N V + LGM ++ D +T ALI A + N+A++ + ++
Sbjct: 1184 LIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIRE 1243
Query: 99 RGVKPDAITFVGVLVACS 116
+G+ + IT V VL ACS
Sbjct: 1244 KGIPANYITMVSVLGACS 1261
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 273 bits (698), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 210/398 (52%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV E+AL LF +++ + + T + AC LGAL+ G LH +I++ E
Sbjct: 405 YVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGS 464
Query: 61 VGLGMALK----------------------DVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
G AL D ++ A+I L G G +ALE F M
Sbjct: 465 NSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVA 524
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD I+F+ VL AC+H+GLVDE +F M +GI P +HY L+ +LGRAGRI
Sbjct: 525 EGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIG 584
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LIK MP + +L CR ++E AA QL ++ P + G+Y++LSN YS
Sbjct: 585 EARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYS 644
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ W R+R+LM +R +KK PGC IE VH F+
Sbjct: 645 AAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGA 704
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+VP+ VL DM+ +KE L H+E+LA+ FGL++ PG + ++KNLR+C+D
Sbjct: 705 KMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLNLPPGATVTVLKNLRICDD 764
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A +SK RE VV D RFHHFK+G CSC ++W
Sbjct: 765 CHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 273 bits (698), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 142/391 (36%), Positives = 214/391 (54%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEAL F ++ +G +++C+ LG+L+ G LH +++ E + G AL
Sbjct: 407 EEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNAL 466
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D ++ A+I L GQG +A+E F EM G+ PD
Sbjct: 467 ITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDR 526
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
I+F+ V+ ACSHAGLV E +F+ M YG+ P EHY ++ +L RAG+ ++A+E+++
Sbjct: 527 ISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVME 586
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MP + LL CRIH N++ AA++L EL P + G+YV+LSN Y+ + +W
Sbjct: 587 SMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWND 646
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
+ ++R+LM +R +KK PGC IEV+ VH F+ K G+
Sbjct: 647 MAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMRKIGY 706
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ VL D++ + KE L+ H+EKLA+ +G + G +R+ KNLR+C DCH A
Sbjct: 707 VPDTKCVLHDVESDLKEHELSTHSEKLAVAYGFMKLPHGATVRVFKNLRICGDCHNAFKF 766
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+SKV RE VV D RFHHF++G CSC D+W
Sbjct: 767 MSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 797
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG-LVDE 123
M K++++ +I LA G +AL++F M+++G +P F G +++CS G L
Sbjct: 385 MPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHG 444
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGAC 183
R H ++ +YG S+ L+ + R G + A L NMP +D ++ A
Sbjct: 445 RQLHAQVV--RYGYESSLSAGNALITMYARCGVVDAAHCLFINMP-CVDAISWNAMIAAL 501
Query: 184 RIHDNLEAAERAAQQLLE--LLPDNGGSYVILS 214
H A +++L+ +LPD ++S
Sbjct: 502 GQHGQGTQAIELFEEMLKEGILPDRISFLTVIS 534
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 273 bits (698), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 150/401 (37%), Positives = 221/401 (55%), Gaps = 49/401 (12%)
Query: 1 YVEDSACEEALLLFREVQ-HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
YV++ A+ +FRE+ GL D VT +++L AC LG L LH I + +E
Sbjct: 418 YVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELES 477
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+V + L K V++ TA++ + G+ +AL+ F EM
Sbjct: 478 NVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMD 537
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+ GVKPD +T+ +L C+H G +++ +F M+E + + P+ +H+ +V +LGR+GR+
Sbjct: 538 LEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRL 597
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
A+EL+++MP D L ACRIH LE E AA+++ EL P + Y+ +SN Y
Sbjct: 598 FDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIY 657
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------- 258
++ W+KV +R+ M ER +KK PG IEVDG +HEF
Sbjct: 658 AAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLH 717
Query: 259 -----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPM-PGVLIRIIKNLRVC 312
AG+VP+ VL D+ E EKET L H+EK+AI FGLVS G IR++KNLRVC
Sbjct: 718 GLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVC 777
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHF-KNGSCSCKDFW 352
+DCHTAT I+++ R+ +V D NRFH F +G CSC D+W
Sbjct: 778 SDCHTATKFIARIAGRDIIVRDCNRFHRFSSDGKCSCGDYW 818
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 58/221 (26%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV + EAL L++++ +G K T VS+L AC+ + AL G +H +I+++ ++ +
Sbjct: 283 YVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSE 342
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNK---------- 88
V + AL +D + + LI A G G
Sbjct: 343 VAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDR 402
Query: 89 ------------------------ALEYFYEMQ-IRGVKPDAITFVGVLVACSHAGLVDE 123
A++ F EM G+KPDA+TF+ VL AC+ G + E
Sbjct: 403 LGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSE 462
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+ +SE + ++ L+ + R G + +AE L
Sbjct: 463 VKALHAQISESE-LESNVVVTNTLINMYARCGSLEEAERLF 502
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 81/199 (40%), Gaps = 37/199 (18%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----------------- 67
D VT +++L +C+ G + G LH I E D +G AL
Sbjct: 6 DNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 68 -------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
++V++ A+I A G +AL ++ M ++G+ D +TFV VL ACS L
Sbjct: 66 ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS--SL 123
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM---------PMAL 171
R H + S+ + LV + R G + A+ + +++ + L
Sbjct: 124 AQGREIHNRVFYSGLDSFQSLAN--ALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181
Query: 172 DHFVLGGLLGACRIHDNLE 190
H G GA RI ++
Sbjct: 182 AHSQSGDWSGALRIFKEMK 200
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 81/190 (42%), Gaps = 29/190 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL+L+ + +GL D VT VS+L AC+ L G +H + ++
Sbjct: 85 YAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ---GREIHNRVFYSGLDSF 141
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L AL +D + A+I+ + G + AL F EM+
Sbjct: 142 QSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKC 201
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
VKP++ T++ V+ S ++ E R H +++ G + L+ + G+ G
Sbjct: 202 -DVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVAN--GFDTDLVVATALINMYGKCGSS 258
Query: 158 AKAEELIKNM 167
+A E+ M
Sbjct: 259 HEAREVFDKM 268
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHA-GLVDE 123
M +D+++ +I + G ++ALE + ++ + G K TFV +L ACS L
Sbjct: 268 MKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQG 327
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGA 182
R+ H +++ G+ + LV + + G + +A ++ M D L+GA
Sbjct: 328 RLVHSHILER--GLDSEVAVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLIGA 383
>gi|302802806|ref|XP_002983157.1| hypothetical protein SELMODRAFT_117419 [Selaginella moellendorffii]
gi|300149310|gb|EFJ15966.1| hypothetical protein SELMODRAFT_117419 [Selaginella moellendorffii]
Length = 704
Score = 273 bits (698), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 188/312 (60%), Gaps = 24/312 (7%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
M ++V++ +LI +A CG G A+ Y Y M+ G KPD ITF+G+L+ACSH GLV+E
Sbjct: 393 MPYRNVVSWNSLIAGMASCGHGMAAVRYLYVMRNEGAKPDHITFMGILIACSHVGLVEEG 452
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACR 184
+HF M +G+ P EHY +V +LGRAG++ A EL++ MP D G LLG+C+
Sbjct: 453 WTHFTSMQGDHGLIPWREHYCRMVDVLGRAGQLGAARELLETMPFIPDVGAWGSLLGSCK 512
Query: 185 IHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGC 244
H +++ RAA+ LL+ + G YV+L+N YSS + +R M R +KK PG
Sbjct: 513 THSDVKLGTRAAESLLQFDDQSSGPYVLLANMYSSVGRVADALAVRNRMKARGVKKQPGV 572
Query: 245 ILIEVDGVVHEFV------------------------KAGFVPNKSEVLFDMDEEEKETA 280
LI VDGV+H FV KAG+ P+ VL + +EEKE
Sbjct: 573 SLIRVDGVLHRFVAGEASHPRHQEILSELSRLQELMKKAGYQPDTKAVLHSVLDEEKEVL 632
Query: 281 LNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHH 340
L+ H+EKLAI F ++ PG IRI+KNLRVC+DCHTAT +SK+ RE +V D RFH+
Sbjct: 633 LSYHSEKLAIAFASIACEPGTPIRIMKNLRVCSDCHTATKFLSKLLQREIIVRDGYRFHN 692
Query: 341 FKNGSCSCKDFW 352
F+NG+CSC D+W
Sbjct: 693 FENGTCSCGDYW 704
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/399 (37%), Positives = 218/399 (54%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL L R++ G+ T+VS + A AL G LH + ++ +
Sbjct: 239 YGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQ 298
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L +L D +++ A+I M G ++AL+ F +M++
Sbjct: 299 DKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRV 358
Query: 99 RG-VKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V PD ITFVGVL AC+H G+V E F LM + Y I+P+++H+ CLV +LG AGR
Sbjct: 359 EAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRF 418
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A +LIK MPM D + G LL C+IH N+E E A Q+L+EL P++ G+YV+LSN Y
Sbjct: 419 EEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIY 478
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ S KW+K R+R+LM R +KK GC IE+ G H F+
Sbjct: 479 AQSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERLE 538
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
AG++P+ V D+ ++EK + H+E+LAI FGL+S G + + KNLRVC
Sbjct: 539 GLMSDAGYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCE 598
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH +IS++ RE ++ D NR+HHF NG CSCKD+W
Sbjct: 599 DCHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/367 (41%), Positives = 214/367 (58%), Gaps = 46/367 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI----MKKN 56
YV+ +EA+ LF +++ G+ ++VT+V++L AC LGAL++GM +H Y K+N
Sbjct: 235 YVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRN 294
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + L M + V++ +A+I LAM G+ +AL F +M
Sbjct: 295 VRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQ 354
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++P+ +TF+G+L ACSH GL+ E F M+ YGI P IEHYGC+V +L RAG +
Sbjct: 355 VGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLH 414
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E I NMPM + V G LLGACR+H N+E AE A + LLEL P N G YV+LSN Y+
Sbjct: 415 EAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYA 474
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ +W+ R+R+ M +R +KK PG I VDGVVHEFV
Sbjct: 475 EAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLE 534
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VPN S VL D++E EK ++ H+EKLA+ FGL++ IRI+KNLR+C D
Sbjct: 535 EMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICED 594
Query: 315 CHTATNI 321
CH+A I
Sbjct: 595 CHSAFQI 601
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EA LLF ++ + + + + L+ H GA D+ M +
Sbjct: 181 EARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAY-----------------DLFSRMPER 223
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD--ERIS 126
+V + T++I CG+ +A+ F +M+ GVK + +T V VL AC+ G +D RI
Sbjct: 224 NVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIH 283
Query: 127 HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIH 186
+ S ++G + ++ L+ + + G + +A ++ + M ++G +H
Sbjct: 284 EY---SNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEME-ERTVVSWSAMIGGLAMH 339
Query: 187 DNLEAAERAAQQLLEL-LPDNGGSYVIL 213
E A R + ++ + NG +++ L
Sbjct: 340 GRAEEALRLFSDMSQVGIEPNGVTFIGL 367
>gi|242055215|ref|XP_002456753.1| hypothetical protein SORBIDRAFT_03g041980 [Sorghum bicolor]
gi|241928728|gb|EES01873.1| hypothetical protein SORBIDRAFT_03g041980 [Sorghum bicolor]
Length = 521
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/378 (39%), Positives = 205/378 (54%), Gaps = 46/378 (12%)
Query: 21 GLTGDKVTMVSLLLACTHLGALEVGMWLH---------PYIMKKNIEVD----------- 60
G+ D+ + ++L +C AL+VG +H P+ N V
Sbjct: 144 GVQTDEFAVAAVLSSCAGSTALDVGRSVHAAAVHLGLCPFRSVGNSLVSMYAKTGALHDA 203
Query: 61 --VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHA 118
V M + +T TALIV A G+G ++LE + +M G +PD +TF+G+L ACSHA
Sbjct: 204 RAVFDAMPARCTITWTALIVGYAQNGRGRRSLEVYTDMVRSGCRPDYVTFIGLLFACSHA 263
Query: 119 GLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGG 178
GLVD HF M+ YGI P +HY C+V +LGRAGR+ +A +L+ LD V
Sbjct: 264 GLVDAGRDHFRSMAVDYGIAPGPDHYACMVDLLGRAGRLDEAMDLLNRSSTELDATVWKS 323
Query: 179 LLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNI 238
LLGACR+H N E AERAA+ + L P + YV+LSN YS +R+W V RIR LM R I
Sbjct: 324 LLGACRVHRNAELAERAAEMVWRLDPTDAVPYVMLSNLYSRARRWGDVARIRALMKARGI 383
Query: 239 KKPPGCILIEVDGVVHEF-----------------------VKA-GFVPNKSEVLFDMDE 274
K PGC + V+GV H F ++A G+VP+ L D
Sbjct: 384 TKEPGCSWVGVNGVTHLFHVEDRGHPRAAEIYRKVEEMTERIRAEGYVPDTDWALQDEAP 443
Query: 275 EEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMD 334
E +E L H+E+LA+ FGL++ IR+ KNLRVC DCHTA +++K Y R ++ D
Sbjct: 444 EGRERGLAYHSERLAVAFGLLAVPAAAPIRVFKNLRVCGDCHTAIKMVAKAYGRVIILRD 503
Query: 335 RNRFHHFKNGSCSCKDFW 352
N FHH K+G CSC D+W
Sbjct: 504 ANCFHHMKDGECSCGDYW 521
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 220/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+++ +EA+ F +++ + + VT VS+L A +L A GM H I++ +
Sbjct: 252 YMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSN 311
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G +L KD ++ A++ A+ G G++A+ F MQ
Sbjct: 312 TLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQE 371
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V+ D+++FV VL AC HAGLV+E F+ MS+KY I+P +EHY C+V +LGRAG
Sbjct: 372 SQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFD 431
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+ IK MP+ D V G LLG+CR+H N++ E A L++L P N +V+LS+ Y+
Sbjct: 432 ETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYA 491
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S +W + R M + +KK PGC +E+ VH F
Sbjct: 492 QSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLE 551
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+VP++S VL +++EE+KE L H+E+LAITF L++ PG I+I+KNLRVC D
Sbjct: 552 KMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCAD 611
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHT T ISK+ R +V D RFHHF++G CSC D+W
Sbjct: 612 CHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 649
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/391 (36%), Positives = 216/391 (55%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E+ + F ++ G+ D+ T+VSLLLAC +LG ++ +H YI+ ++ ++ + AL
Sbjct: 223 EKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATAL 282
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D + TA++ AM G+G +A+E+F M GV PD
Sbjct: 283 LDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDH 342
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TF +L ACSH+GLV+E ++F +M E YG+ +EHY C+V +LGR+G + A +LIK
Sbjct: 343 VTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIK 402
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MPM + V G L+GACR+ N+E + A++L L P + +Y+ LSN YS++ +W+
Sbjct: 403 SMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSAAGQWRD 462
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
++R LM ER + + PGC IE +H FV + GF
Sbjct: 463 ASKVRALMKERVLIRNPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEELVRKNREVGF 522
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VL D+DEE KE +N H+EKLAI FGL+ G+ + I KN+R+C DCH +
Sbjct: 523 ASKTEYVLHDVDEEVKEDLINKHSEKLAIAFGLLVTNAGMPLIITKNIRICGDCHGFAKL 582
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS + R ++ D RFHHF NG CSC D+W
Sbjct: 583 ISLIEKRTIIIRDTKRFHHFTNGLCSCGDYW 613
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 22/131 (16%)
Query: 12 LLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL-------- 63
LLFR GL ++VT++ ++ AC +G L+VG +H +K + ++V +
Sbjct: 126 LLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLY 185
Query: 64 --------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFV 109
GM+++ +++ +++ V G K + YF M+ G+ D T V
Sbjct: 186 GKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVV 245
Query: 110 GVLVACSHAGL 120
+L+AC + G+
Sbjct: 246 SLLLACENLGV 256
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 149/386 (38%), Positives = 208/386 (53%), Gaps = 46/386 (11%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK---- 68
L REV++ G T SLL +G + G +H ++K D+ + AL
Sbjct: 454 LDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYS 513
Query: 69 ------------------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVG 110
+V+T T++I A G +KALE FY M GVKP+ +T++
Sbjct: 514 KCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIA 573
Query: 111 VLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMA 170
VL ACSH GL+DE HF M + +GI P +EHY C+V +LGR+G +++A E I +MP
Sbjct: 574 VLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFD 633
Query: 171 LDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIR 230
D V LG+CR+H N + E AA+ +LE P + +Y++LSN Y++ +W+ V IR
Sbjct: 634 ADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIR 693
Query: 231 ELMAERNIKKPPGCILIEVDGVVHEF------------------------VKAGFVPNKS 266
+ M ++ I K G IEV+ VH+F G+VPN
Sbjct: 694 KNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELALKIKNVGYVPNTD 753
Query: 267 EVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVY 326
VL D+++E+KE L H+EKLA+ F L+S IR+ KNLRVC DCHTA IS V
Sbjct: 754 FVLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPIRVFKNLRVCGDCHTAIKYISMVS 813
Query: 327 NRETVVMDRNRFHHFKNGSCSCKDFW 352
RE VV D NRFHH K+G+CSC D+W
Sbjct: 814 GREIVVRDANRFHHMKDGTCSCNDYW 839
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 39/187 (20%)
Query: 8 EEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMA 66
+EA+ LF E + G D+ T+ L+ C + L +G LH ++++ + +D+ +G +
Sbjct: 243 DEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCS 302
Query: 67 LKD----------------------VMTLTALIVVLAMCGQG--NKALEYFYEMQIRG-V 101
L D VM+ TAL+ G G +A+ F M ++G V
Sbjct: 303 LVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGV 362
Query: 102 KPDAITFVGVLVACSHAGLVDERISHFNLMSEKYG--IRPSIEHYGC----LVYILGRAG 155
P+ TF GVL AC A L D F+ + +G I+ + C LV + ++G
Sbjct: 363 APNCFTFSGVLKAC--ASLPD-----FDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSG 415
Query: 156 RIAKAEE 162
R+ A +
Sbjct: 416 RMESARK 422
>gi|302764988|ref|XP_002965915.1| hypothetical protein SELMODRAFT_167728 [Selaginella moellendorffii]
gi|300166729|gb|EFJ33335.1| hypothetical protein SELMODRAFT_167728 [Selaginella moellendorffii]
Length = 912
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 188/312 (60%), Gaps = 24/312 (7%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
M ++V++ +LI +A CG G A+ Y Y M+ G KPD ITF+G+L+ACSH GLV+E
Sbjct: 601 MPYRNVVSWNSLIAGMASCGHGMAAVRYLYVMRNEGAKPDHITFMGILIACSHVGLVEEG 660
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACR 184
+HF M +G+ P EHY +V +LGRAG++ A EL++ MP D G LLG+C+
Sbjct: 661 WTHFTSMQGDHGLIPWREHYCRMVDVLGRAGQLGAARELLETMPFIPDVGAWGSLLGSCK 720
Query: 185 IHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGC 244
H +++ RAA+ LL+ + G YV+L+N YSS + +R M R +KK PG
Sbjct: 721 THSDVKLGTRAAESLLQFDDQSSGPYVLLANMYSSVGRVADALAVRNRMKARGVKKQPGV 780
Query: 245 ILIEVDGVVHEFV------------------------KAGFVPNKSEVLFDMDEEEKETA 280
LI VDGV+H FV KAG+ P+ VL + +EEKE
Sbjct: 781 SLIRVDGVLHRFVAGEASHPRHQEILSELSRLQELMKKAGYQPDTKAVLHSILDEEKEVL 840
Query: 281 LNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHH 340
L+ H+EKLAI F ++ PG IRI+KNLRVC+DCHTAT +SK+ RE +V D RFH+
Sbjct: 841 LSYHSEKLAIAFASIACEPGTPIRIMKNLRVCSDCHTATKFLSKLLQREIIVRDGYRFHN 900
Query: 341 FKNGSCSCKDFW 352
F+NG+CSC D+W
Sbjct: 901 FENGTCSCGDYW 912
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
[Vitis vinifera]
Length = 1005
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 220/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+++ +EA+ F +++ + + VT VS+L A +L A GM H I++ +
Sbjct: 608 YMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSN 667
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G +L KD ++ A++ A+ G G++A+ F MQ
Sbjct: 668 TLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQE 727
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V+ D+++FV VL AC HAGLV+E F+ MS+KY I+P +EHY C+V +LGRAG
Sbjct: 728 SQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFD 787
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+ IK MP+ D V G LLG+CR+H N++ E A L++L P N +V+LS+ Y+
Sbjct: 788 ETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYA 847
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S +W + R M + +KK PGC +E+ VH F
Sbjct: 848 QSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLE 907
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+VP++S VL +++EE+KE L H+E+LAITF L++ PG I+I+KNLRVC D
Sbjct: 908 KMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCAD 967
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHT T ISK+ R +V D RFHHF++G CSC D+W
Sbjct: 968 CHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 24/233 (10%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V+ EEAL LF+E+Q++ + ++VT++S+L AC L L++G +H + +K +++ D+
Sbjct: 406 VQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDL 465
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
G AL +D++T +LI A G A++ FY++++
Sbjct: 466 STGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLS 525
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
+ PDA T VGV+ AC+ +D+ L+ K G L+ + + G +
Sbjct: 526 AINPDAGTMVGVVPACALLNDLDQGTCIHGLIV-KLGFESDCHVKNALIDMYAKCGSLPS 584
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQL-LELLPDNGGSYV 211
AE L D ++ A + + + A + Q+ LE N ++V
Sbjct: 585 AEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFV 637
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 22/134 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y EAL ++ + KGL DK T +L ACT L+ G+W H I ++ +E D
Sbjct: 104 YTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERD 163
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G L +DV+ A+I L+ +A+++F MQ+
Sbjct: 164 VFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQL 223
Query: 99 RGVKPDAITFVGVL 112
GV+P +++ + +
Sbjct: 224 VGVEPSSVSLLNLF 237
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 22/143 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + E L LF +++ + +KV+ VS LA LE G +H +++ I+ D
Sbjct: 304 YAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSD 363
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + G+ +D++ +A+I L G +AL F EMQ
Sbjct: 364 ILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQN 423
Query: 99 RGVKPDAITFVGVLVACSHAGLV 121
+ +KP+ +T + +L AC+ L+
Sbjct: 424 QKMKPNRVTLMSILPACADLSLL 446
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 74 TALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSE 133
++I Q N+ALE +Y M +G++PD TF VL AC+ A + E + F+ +
Sbjct: 98 NSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGV-WFHGEID 156
Query: 134 KYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
+ G+ + LV + + G + +A E+ MP
Sbjct: 157 RRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMP 191
>gi|242094040|ref|XP_002437510.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
gi|241915733|gb|EER88877.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
Length = 653
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 154/400 (38%), Positives = 229/400 (57%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI----MKKN 56
Y +++ +AL F ++ G+ D+V++ + AC LGA+ +W+ + +N
Sbjct: 254 YAQNAMPVKALEAFEQMAGAGMPIDEVSLTGAISACAQLGAVRRAVWIQEIADRSGLGRN 313
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ V GL GM K+V T +++IV LA G+ N A+ F +M
Sbjct: 314 VVVGSGLVDMYAKCGLIDEACRVFEGMQEKNVYTYSSMIVGLASHGRANDAIALFNDMVR 373
Query: 99 RG-VKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
R V+P+ +TF+GVL ACSHAG+V E +F M ++YGI PS +HY C+V +LGRAG +
Sbjct: 374 RADVEPNHVTFIGVLTACSHAGMVKEGRYYFAQMKDRYGILPSADHYTCMVDLLGRAGLV 433
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A +L+K+M + V G LLGACRIH N + A+ AAQ L +L P+ G+YV+LSN
Sbjct: 434 IEALDLVKSMTVEPHGGVWGALLGACRIHGNTKVAKVAAQHLFKLEPEGIGNYVLLSNTL 493
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIE-VDGVVHEFVK------------------ 258
+S+ +W +V ++R+LM R +KK P E DG+VH+F
Sbjct: 494 ASAGEWDEVSKVRKLMRIRGLKKDPAVSSFEGRDGLVHQFFAGDNTHPWMHEIKKTLLEL 553
Query: 259 ------AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
AG+VP S V++++ +EEKE L H+EKLA++FGL++ IRI+KNLR+C
Sbjct: 554 RARLKLAGYVPVLSSVVYNVSDEEKERLLMGHSEKLALSFGLLTLESRSSIRIVKNLRIC 613
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH ++SKV E +V D RFHHF++G CSC FW
Sbjct: 614 EDCHLFIRLVSKVEPIEIIVRDNMRFHHFRDGECSCGGFW 653
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/398 (36%), Positives = 222/398 (55%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EA+ +F E+ +K + D +++ S + AC +G+LE ++ Y+ + + D
Sbjct: 298 YAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDD 357
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL +DV+ +A+IV + G+ +A+ + M+
Sbjct: 358 VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER 417
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV P+ +TF+G+L+AC+H+G+V E FN M++ + I P +HY C++ +LGRAG +
Sbjct: 418 GGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLD 476
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E+IK MP+ V G LL AC+ H ++E E AAQQL + P N G YV LSN Y+
Sbjct: 477 QAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYA 536
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
++R W +V +R M E+ + K GC +EV G + F
Sbjct: 537 AARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIES 596
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ GFV NK L D+++EE E L H+E++AI +GL+S G +RI KNLR C +
Sbjct: 597 RLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVN 656
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT +ISK+ +RE VV D NRFHHFK+G CSC D+W
Sbjct: 657 CHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 27/192 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ ++ALL++ +Q ++ D T LL AC+ L L++G ++H + + + D
Sbjct: 94 YSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDAD 153
Query: 61 V------------------------GLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
V GL + + +++ TA++ A G+ +ALE F +M
Sbjct: 154 VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM 213
Query: 97 QIRGVKPDAITFVGVLVACS-HAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
+ VKPD + V VL A + L R H +++ I P + L + + G
Sbjct: 214 RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL--LISLNTMYAKCG 271
Query: 156 RIAKAEELIKNM 167
++A A+ L M
Sbjct: 272 QVATAKILFDKM 283
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 82/182 (45%), Gaps = 23/182 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL +F +++ + D V +VS+L A T L L+ G +H ++K +E++
Sbjct: 197 YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256
Query: 61 VGLGMALK----------------------DVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L ++L +++ A+I A G +A++ F+EM
Sbjct: 257 PDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN 316
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ V+PD I+ + AC+ G +++ S + + + R + L+ + + G +
Sbjct: 317 KDVRPDTISITSAISACAQVGSLEQARSMYEYVG-RSDYRDDVFISSALIDMFAKCGSVE 375
Query: 159 KA 160
A
Sbjct: 376 GA 377
>gi|414883627|tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea mays]
Length = 637
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 225/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ E AL +F+ + +G+ ++ +V+ L A LG LE G ++H + + + +
Sbjct: 240 YVKEGEPEVALGVFKNMVAQGVKANEAAIVTALSAAAQLGLLEQGKFVHEVVKRVGMTMS 299
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL +DV ++I LA G G+ A++ F +
Sbjct: 300 VNLGAALIDMYSKCGSVAAAKEVFDAMPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVS 359
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G P +ITFVGVL ACS GLVDE +F LM+EKY I +EHYGC+V +L RAG +
Sbjct: 360 EGFCPTSITFVGVLNACSRTGLVDEGRRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQ 419
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A ELI+ M + D + G +L AC+ H ++ +L+EL P + G YV+L++ Y+
Sbjct: 420 EAVELIEGMRIPPDPVLWGTILSACKRHGLVDLGITVGNKLIELDPAHDGYYVLLASIYA 479
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++KW +V+++R+LM+ R K G L+E G+VH+F+
Sbjct: 480 KAKKWDEVRKVRKLMSNRGTSKSAGWSLMEAHGIVHKFLVGDMNHKDSARIYNMLCTINR 539
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+VP+ S VL D+ +EEK A+ +H+E+LAI +G + G IRI+KNL VC D
Sbjct: 540 RLAEAGYVPDVSSVLHDIGDEEKVHAIKVHSERLAIAYGFIVVEAGSPIRIVKNLSVCGD 599
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH + +++KV+ RE VV D +RFHH K+G CSC D+W
Sbjct: 600 CHEFSKMVTKVFGREIVVRDGSRFHHMKDGKCSCHDYW 637
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 64 GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE 123
GM ++D ++ + +I G+ AL F M +GVK + V L A + GL+ E
Sbjct: 224 GMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVAQGVKANEAAIVTALSAAAQLGLL-E 282
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
+ + + ++ G+ S+ L+ + + G +A A+E+ MP
Sbjct: 283 QGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFDAMP 327
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/397 (37%), Positives = 217/397 (54%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V++ AL +FR +Q G+ D TM+ +L AC+HL AL+ G H Y++ + D
Sbjct: 389 VQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDT 448
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ AL D+++ A+I+ + G G +AL F+++
Sbjct: 449 LICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLAL 508
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G+KPD ITF+ +L +CSH+GLV E F+ MS + I P +EH C+V ILGRAG I +
Sbjct: 509 GLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDE 568
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A I+NMP D + LL ACRIH N+E E ++++ L P++ G++V+LSN YS+
Sbjct: 569 AHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSA 628
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
+ +W IR + +KK PGC IE++G+VH FV
Sbjct: 629 AGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVE 688
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+ G+ S V D++EEEKE L H+EKLAI FG+++ G I + KNLRVC DC
Sbjct: 689 MKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDC 748
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H A ++ + RE V D NRFHHFKNG+C+C DFW
Sbjct: 749 HAAIKFMTVITKREITVRDANRFHHFKNGTCNCGDFW 785
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 83/191 (43%), Gaps = 26/191 (13%)
Query: 1 YVEDSACEEALLLFREVQHK-GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
YV +EAL LF ++ K + VT+ S+L AC L L G LH YI+K +
Sbjct: 286 YVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVL 345
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
D+ LG L KD ++ +A++ G AL F MQ
Sbjct: 346 DILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQ 405
Query: 98 IRGVKPDAITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ G+ PD T +GVL ACSH A L SH L+ + I L+ + + G+
Sbjct: 406 LSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLI--CNALIDMYSKCGK 463
Query: 157 IAKAEELIKNM 167
I+ A E+ M
Sbjct: 464 ISFAREVFNRM 474
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + A+ L+ + H G+ +K T +L AC+ L A+E G+ +H + +E
Sbjct: 84 YAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLE-- 141
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
DV TAL+ A CG +A F M R D + + ++ CS GL
Sbjct: 142 -------SDVFVCTALVDFYAKCGILVEAQRLFSSMSHR----DVVAWNAMIAGCSLYGL 190
Query: 121 VDERISHFNLMSEKYGIRPS 140
D+ + M E+ GI P+
Sbjct: 191 CDDAVQLIMQMQEE-GICPN 209
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/396 (38%), Positives = 223/396 (56%), Gaps = 44/396 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------ 54
+ ++S + AL LF+ ++ G ++ T+ S+L ACT L LE+GM H +I+K
Sbjct: 235 FAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLI 294
Query: 55 -KNIEVD-------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG 100
N VD V M +DV+T + +I LA G +AL+ F M+ G
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSG 354
Query: 101 VKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA 160
KP+ IT VGVL ACSHAGL+++ +F M + YGI P EHYGC++ +LG+AG++ A
Sbjct: 355 TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDA 414
Query: 161 EELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSS 220
+L+ M D LLGACR+ N+ AE AA++++ L P++ G+Y +LSN Y++S
Sbjct: 415 VKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANS 474
Query: 221 RKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA--------------------- 259
+KW V+ IR M +R IKK PGC IEV+ +H F+
Sbjct: 475 QKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRL 534
Query: 260 ---GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCH 316
G+VP + VL D++ E+ E +L H+EKLA+ FGL++ +IRI KNLR+C DCH
Sbjct: 535 TGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCH 594
Query: 317 TATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ SK+ R V+ R+HHF++G CSC D+W
Sbjct: 595 VFCKLASKLEIRSIVIRGPIRYHHFQDGKCSCGDYW 630
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 214/398 (53%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y +S +E + LF ++ + L D+ ++V L +C LGAL++G W I + +
Sbjct: 288 YASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTN 347
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL KD++ + A I LA G + F + +
Sbjct: 348 LFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEK 407
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD TF+G+L C HAGL+ + + FN +S Y ++ ++EHYGC+V + GRAG +
Sbjct: 408 LGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLD 467
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A LI +MPM + V G LL CR+ + + AE ++L+ L P N G+YV LSN YS
Sbjct: 468 DAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYS 527
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
+W + +R++M ++ +KK PG IE++G VHEF+
Sbjct: 528 VGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGN 587
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
GFVP V FD++EEEKE L H+EKLA+ GL+S G +IR++KNLRVC D
Sbjct: 588 EMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGD 647
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH +ISK+ RE VV D NRFH F NGSCSC D+W
Sbjct: 648 CHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 23/189 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI----MKKN 56
Y EA+ LF+++ G+ D +V +L AC H+G L+ G W+ Y+ M+KN
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKN 246
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V L M KD++T + +I A + +E F +M
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ 306
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+KPD + VG L +C+ G +D +L+ +++ ++ L+ + + G +A
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLI-DRHEFLTNLFMANALIDMYAKCGAMA 365
Query: 159 KAEELIKNM 167
+ E+ K M
Sbjct: 366 RGFEVFKEM 374
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 78/189 (41%), Gaps = 23/189 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V + E L LF ++ GL T +L ACT + ++G+ LH ++K D
Sbjct: 86 FVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHD 145
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +L + V+T TAL G+ +A++ F +M
Sbjct: 146 VAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVE 205
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVKPD+ V VL AC H G +D M E + S LV + + G++
Sbjct: 206 MGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVR-TTLVNLYAKCGKME 264
Query: 159 KAEELIKNM 167
KA + +M
Sbjct: 265 KARSVFDSM 273
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 160/400 (40%), Positives = 234/400 (58%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFRE--VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
Y ++ EAL LFR+ ++++ L + VTMVS+L AC L ALE G +H YI+++ ++
Sbjct: 259 YSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLD 318
Query: 59 V----------------DVGLG------MALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
++ LG M +DV++ +LI + G G KA++ F EM
Sbjct: 319 SILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEM 378
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+G+ P I+FV VL ACSHAGLV+E F M + I PS+EHY C+V +LGRA R
Sbjct: 379 IDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANR 438
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A ++I +M + V G LLG+CRIH N+E AERA +L EL P N G+YV+L++
Sbjct: 439 LDEAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVELAERATSRLFELEPTNAGNYVLLADI 498
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+ ++ W +VKR++ L+ R ++K PG IE+ ++ F+
Sbjct: 499 YAEAKMWNEVKRVKMLLEARGLQKVPGRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLKL 558
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+ G+VP+ VL+D+D EEKE + H+EKLA+ FGL++ G IRI KNLR+C
Sbjct: 559 SMEMKEKGYVPDTKVVLYDLDPEEKERIVLGHSEKLALAFGLINSKKGETIRITKNLRLC 618
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+ T ISK NRE +V D NRFH F++G CSC D+W
Sbjct: 619 EDCHSVTKFISKFANREILVRDVNRFHLFQDGVCSCGDYW 658
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 36/207 (17%)
Query: 32 LLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----------------------KD 69
L+L+CT +L G+ LH +++ + D L L +
Sbjct: 84 LILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRT 143
Query: 70 VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG-----LVDER 124
+ AL L + G G + L+ + M GV D T+ VL AC + L++ R
Sbjct: 144 IYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGR 203
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACR 184
H +++ ++G + L+ + R G + A + MP + + V + AC
Sbjct: 204 EIHGHIL--RHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMP--VKNVVSWSAMIACY 259
Query: 185 IHDN--LEAAERAAQQLLE---LLPDN 206
+ LEA E + +LE LLP++
Sbjct: 260 SKNGKPLEALELFRKMMLENQDLLPNS 286
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 222/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLH---------PY 51
Y ++ EEA+ +F ++Q G+ D T+ S++ +C +L +LE G H +
Sbjct: 346 YGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISF 405
Query: 52 IMKKN-----------IEVDVGL--GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
I N IE L M+ +D ++ TAL+ A G+ N+ ++ F M +
Sbjct: 406 ITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLV 465
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+G+KPDA+TF+ VL ACS AGLV+ +F M + +GI P +HY C++ + GRAGR+
Sbjct: 466 QGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLE 525
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A+ I MP + D LL +CR++ N E + AA+ LLEL P N Y++LS+ Y+
Sbjct: 526 EAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYA 585
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGC------------------------ILIEVDGVVH 254
+ KW V ++R M E+ +K PG I E++ + H
Sbjct: 586 AKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNH 645
Query: 255 EFVKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ ++ G+VP+ S VL D+++ EK LN H+EKLAI FGL+ G+ IR++KNLRVC D
Sbjct: 646 KMIEEGYVPDASSVLHDVEDSEKMKMLNHHSEKLAIAFGLLFIPHGLPIRVVKNLRVCGD 705
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT ISK+ RE +V D RFH FK+G+CSC DFW
Sbjct: 706 CHNATKYISKISQREILVRDAVRFHLFKDGTCSCGDFW 743
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EA+ LFR+++ +G+ D+ T S+L AC L AL+ G +H I++ +V +G AL
Sbjct: 253 EAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALV 312
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
K+V++ TA++V G +A+ F +MQ G++PD
Sbjct: 313 DMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDF 372
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
T V+ +C++ ++E + F+ + G+ I L+ + G+ G I + +L
Sbjct: 373 TLGSVISSCANLASLEEG-AQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDE 431
Query: 167 MPM 169
M
Sbjct: 432 MSF 434
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 1 YVEDSACEEALLLFREVQHKG-LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
YV + EA+ + + G L +++T ++LL + G +++G +H I+K
Sbjct: 112 YVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGA 171
Query: 60 DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
V +G +L D+ L+ V A + F E+Q R V G+L +G
Sbjct: 172 YVFVGSSLVDMYAKMGLVSV---------ASQVFDEVQERNVVMYNTMITGLL----RSG 218
Query: 120 LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM---PMALDHFVL 176
+V + F+ M E R SI + ++ L + G A+A +L ++M MA+D +
Sbjct: 219 MVKDSKRLFHGMKE----RDSIS-WTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTF 273
Query: 177 GGLLGAC 183
G +L AC
Sbjct: 274 GSVLTAC 280
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/429 (35%), Positives = 226/429 (52%), Gaps = 77/429 (17%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EA+ +F +++ + ++ T S+L AC + L +G +H +++K + D
Sbjct: 316 YAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSD 375
Query: 61 VGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEM-- 96
V + AL DV +T +IV G G KAL F M
Sbjct: 376 VFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLE 435
Query: 97 ---------------------------QIRG--VKPDAITFVGVLVACSHAGLVDERISH 127
QI VKPD +TFVGVL AC++AGL+D+ ++
Sbjct: 436 YRVQATEVTYSSALRACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAY 495
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHD 187
F M + +GI P IEHY C+V++LGR G + KA +LI +P V LLGAC IH+
Sbjct: 496 FTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHN 555
Query: 188 NLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILI 247
++E +AQ++LE+ P + ++V+LSN Y+++++W V +R+ M + +KK PG I
Sbjct: 556 DIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWI 615
Query: 248 EVDGVVHEFV------------------------KAGFVPNKSEVLFDMDEEEKETALNL 283
E G VH F KAG++PN + VL D+++EEKE L +
Sbjct: 616 ESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWV 675
Query: 284 HTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKN 343
H+E+LA++FG++ G IRI+KNLR+C DCH A ISKV RE VV D NRFHHF+
Sbjct: 676 HSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQE 735
Query: 344 GSCSCKDFW 352
G CSC D+W
Sbjct: 736 GLCSCGDYW 744
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 29/226 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ E+ +EAL LF +++ G + T S+ AC L A +VG +H +K E+D
Sbjct: 215 FAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELD 274
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G+AL KDV+ + +I A Q +A+E F++M+
Sbjct: 275 LYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQ 334
Query: 99 RGVKPDAITFVGVLVAC-SHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V P+ TF VL AC + GL H +++ K G+ + L+ + + GR+
Sbjct: 335 ALVLPNQFTFASVLQACATMEGLNLGNQIHCHVI--KIGLHSDVFVSNALMDVYAKCGRM 392
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELL 203
+ EL P D ++G H L E+A + L +L
Sbjct: 393 ENSMELFAESPHRNDVTWNTVIVG----HVQLGDGEKALRLFLNML 434
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 26/139 (18%)
Query: 1 YVEDSACEEALLLFREVQHKG--LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
Y E EA+ LF + +G L T + LL T G E+G +H I K E
Sbjct: 114 YAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCG--ELGWGIHACIFKLGHE 171
Query: 59 VDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+ +G AL KD+++ T ++ A +AL+ F +M
Sbjct: 172 SNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQM 231
Query: 97 QIRGVKPDAITFVGVLVAC 115
++ G KP+ TF V AC
Sbjct: 232 RMVGFKPNNFTFASVFKAC 250
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/391 (36%), Positives = 206/391 (52%), Gaps = 47/391 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E AL+ F E+ G T S+ + LGALE G W+H +++K ++ G L
Sbjct: 235 ETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTL 294
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
KD++T ++ A G G +A+ +F EM+ G+ +
Sbjct: 295 LDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQ 354
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TF+ +L ACSH GLV E +F +M E Y + P I+H+ +V +LGRAG + A I
Sbjct: 355 VTFLCILTACSHGGLVKEGKRYFEMMKE-YDLEPEIDHFVTVVALLGRAGLLNFALVFIF 413
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP+ V G LL ACR+H N + + AA + EL PD+ G V+L N Y+S+ +W
Sbjct: 414 KMPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDA 473
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
R+R +M +KK P C +E++ VH FV K G+
Sbjct: 474 AARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKKIRKEGY 533
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ VL +D++E+E L H+EKLA+ F L+ G IRI+KN+R+C DCH+A
Sbjct: 534 VPDMDYVLLRVDDQEREANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKY 593
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISKV+ RE VV D NRFHHF NGSCSC D+W
Sbjct: 594 ISKVFGREIVVRDTNRFHHFSNGSCSCADYW 624
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 213/391 (54%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EE+L LF ++ +G ++AC L AL G LH +++ + + G AL
Sbjct: 409 EESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNAL 468
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D ++ A+I L G G +ALE F M + PD
Sbjct: 469 ITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDR 528
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
ITF+ VL CSHAGLV+E +F MS YGI P +HY ++ +L RAG+ ++A+++I+
Sbjct: 529 ITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIE 588
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP+ + LL CRIH N++ +AA++L EL+P + G+YV+LSN Y++ +W
Sbjct: 589 TMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDD 648
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
V ++R+LM ++ +KK PGC IEV+ VH F+ K G+
Sbjct: 649 VAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGY 708
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
+P+ VL DM+ E+KE L+ H+EKLA+ FGL+ G +R+ KNLR+C DCH A
Sbjct: 709 IPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFKF 768
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+SKV RE VV D RFHHFKNG CSC ++W
Sbjct: 769 MSKVVEREIVVRDGKRFHHFKNGECSCGNYW 799
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 9/134 (6%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV EAL +FR++ G+ D+ T S+L AC + G G +H YI++
Sbjct: 266 YVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPS 325
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+ +++ + AL + CG+ ++A + F +M ++ D +++ +L +AG
Sbjct: 326 LDFSLSVNN-----ALATLYWKCGKVDEARQVFNQMPVK----DLVSWNAILSGYVNAGR 376
Query: 121 VDERISHFNLMSEK 134
+DE S F M E+
Sbjct: 377 IDEAKSFFEEMPER 390
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 6/154 (3%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSH-AGLVDE 123
M ++++T T +I LA G G ++L+ F M+ G +P F G ++AC+ A L+
Sbjct: 387 MPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHG 446
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGAC 183
R H L+ + G S+ L+ + + G + A L MP LD ++ A
Sbjct: 447 RQLHAQLV--RLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPY-LDSVSWNAMIAAL 503
Query: 184 RIHDNLEAAERAAQQLL--ELLPDNGGSYVILSN 215
H + A + +L ++LPD +LS
Sbjct: 504 GQHGHGAQALELFELMLKEDILPDRITFLTVLST 537
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 24/164 (14%)
Query: 55 KNIEVDVGL----GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVG 110
+N E+D GM K V+ A+I G +ALE F +M + G++ D T+
Sbjct: 237 RNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTS 296
Query: 111 VLVACSHAG--LVDERISHFNLMSEKYGIRPSIEHY----GCLVYILGRAGRIAKAEELI 164
VL AC++AG L +++ + L +E RPS++ L + + G++ +A ++
Sbjct: 297 VLSACANAGFFLHGKQVHAYILRTEP---RPSLDFSLSVNNALATLYWKCGKVDEARQVF 353
Query: 165 KNMP---MALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPD 205
MP + + +L G + A RI + A+ E +P+
Sbjct: 354 NQMPVKDLVSWNAILSGYVNAGRIDE--------AKSFFEEMPE 389
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 229/398 (57%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ ++AL L++ + + +VT S+L AC L A+E+G +H +K + D
Sbjct: 319 YVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKD 378
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL +D ++ A+I +M G +AL+ F MQ
Sbjct: 379 VVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQE 438
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
P+ +TFV +L ACS+AGL+D ++F M + YGI P +EHY C+V++LGR+G +
Sbjct: 439 TECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLD 498
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
KA +LI+ +P+ + V LLGAC IH++++ +AQQ+L++ P + ++V+LSN Y+
Sbjct: 499 KAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYA 558
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+R+W V +R+ M + +KK PG IE G+VH F
Sbjct: 559 RTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMKMISGMLEWLNM 618
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
KAG+VP+ + VL D++++EK+ L +H+E+LA+ FGL+ IRI+KNLR+C D
Sbjct: 619 KTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGLIRTPSRGHIRILKNLRICTD 678
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A +ISK+ R+ ++ D NRFHHF++G CSC D+W
Sbjct: 679 CHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSCGDYW 716
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 25/191 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E+ +++L LF E++ G + T +L AC L A VG +H ++K E+D
Sbjct: 117 YAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMD 176
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G+ L DV+ + +I A Q +A+E F +M+
Sbjct: 177 LYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRR 236
Query: 99 RGVKPDAITFVGVLVAC-SHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V P+ TF VL +C S L + H +++ K G+ ++ L+ + + GR+
Sbjct: 237 AFVLPNQFTFASVLQSCASIENLQLGKQVHCHVL--KVGLDGNVFVSNALMDVYAKCGRL 294
Query: 158 AKAEELIKNMP 168
+ +L +P
Sbjct: 295 DNSMKLFMELP 305
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 100/238 (42%), Gaps = 26/238 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + EA+ LF +++ + ++ T S+L +C + L++G +H +++K ++ +
Sbjct: 218 YAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGN 277
Query: 61 VGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL DV +T +IV G G+KAL + M
Sbjct: 278 VFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLE 337
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V+ +T+ VL AC+ + E + + +S K + L+ + + G I
Sbjct: 338 CQVQASEVTYSSVLRACASLAAM-ELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIK 396
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQ--QLLELLPDNGGSYVILS 214
A L+ +M D ++ +H + A +A Q Q E +P+ ILS
Sbjct: 397 NA-RLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILS 453
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 22/137 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ +E + LF V +G + ++L + E+ LH I K E +
Sbjct: 16 YVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSLHACIYKLGHESN 75
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL KD+++ T ++ A + +L+ F EM++
Sbjct: 76 AFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRM 135
Query: 99 RGVKPDAITFVGVLVAC 115
G P+ TF GVL AC
Sbjct: 136 VGFNPNHFTFAGVLKAC 152
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 141/401 (35%), Positives = 229/401 (57%), Gaps = 49/401 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI--E 58
Y ++ +EAL F+++Q G+ D+VT+ ++ AC LGA++ W+ +
Sbjct: 250 YAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPS 309
Query: 59 VDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+V +G AL ++V + +++I+ AM G+ + AL+ F++M
Sbjct: 310 GNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDM 369
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
++P+ +TF+G+L ACSHAGLV++ F M + +G+ PS +HY C+V +LGRAG
Sbjct: 370 LKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGC 429
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A +L+K MPM + V G LLGACRIH N + A+ AA +L +L P+ G+Y++LSN
Sbjct: 430 LEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNI 489
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIE-VDGVVHEFVKA---------------- 259
Y+S+ +W++V ++R+++ E+ KK PGC E +G +H+F
Sbjct: 490 YASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQ 549
Query: 260 --------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
G+ PN +D+ ++EKE L H+EKLA+ +GL+ G I+I+KN+R+
Sbjct: 550 LIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRI 609
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH S++ RE +V D RFHHF NG+CSC +FW
Sbjct: 610 CEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 16/128 (12%)
Query: 28 TMVSLLLACTHLGAL----------EVGMWLH---PYIMKKNIEVDVGL--GMALKDVMT 72
+M+ L + C LG +V W Y ++E GL + LKD++
Sbjct: 183 SMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVA 242
Query: 73 LTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMS 132
TA++ A G+ +ALEYF +MQ G++ D +T GV+ AC+ G V + + ++
Sbjct: 243 WTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAV-KHANWIRDIA 301
Query: 133 EKYGIRPS 140
E+ G PS
Sbjct: 302 ERSGFGPS 309
>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
Length = 773
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 147/386 (38%), Positives = 210/386 (54%), Gaps = 47/386 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL----- 63
EA+ FR +Q KG+ VT+ ++L C + AL G +H I+K + D +
Sbjct: 261 EAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLV 320
Query: 64 -----------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
GM KD+ + LI A+ G+ +A+E F EM G PD I
Sbjct: 321 DMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGI 380
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF+ +L CSHAGL D+ F +M +GI P++EHY CLV +LGRAGRI +A E++KN
Sbjct: 381 TFIALLSGCSHAGLADDGCRLFEMMKMDHGISPTVEHYACLVDVLGRAGRIKEALEIVKN 440
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP + G LL +CR+H N+ AE A++L EL P+N G+YV+LSN Y+++ W+ V
Sbjct: 441 MPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESV 500
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------------KAGF 261
K +RE M +R + K GC +++ +H FV + G+
Sbjct: 501 KVVREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEFRNSVEYKKVWKRLMEAMEEVGY 560
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ VL D+ EE + + H+E+LA F L++ G+ IRI KNLRVC DCH+
Sbjct: 561 VPDTGVVLHDVSEEMRAMWVCGHSERLATMFALINTASGMPIRITKNLRVCVDCHSWVKT 620
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCS 347
+SKV R V+ D NRFHHFK+G CS
Sbjct: 621 LSKVTGRVIVLRDTNRFHHFKDGVCS 646
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 288 LAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISK 324
LA F L++ G+ IRI KNL VC DCH+ I+SK
Sbjct: 700 LATMFALINTASGMPIRITKNLHVCVDCHSWVKIVSK 736
>gi|302794404|ref|XP_002978966.1| hypothetical protein SELMODRAFT_109758 [Selaginella moellendorffii]
gi|300153284|gb|EFJ19923.1| hypothetical protein SELMODRAFT_109758 [Selaginella moellendorffii]
Length = 318
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 128/310 (41%), Positives = 195/310 (62%), Gaps = 25/310 (8%)
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISH 127
K++++ + +I G ++AL+ F M + G+ PDA+TF +L ACSHAGL + H
Sbjct: 9 KNLISWSTMITAFVQNGHTDRALDAFLAMNVDGLFPDAVTFKSILSACSHAGLFEHGFFH 68
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHD 187
F+L+ +GI P+++H+ C+V +LGR+GR+ +AEEL++ MP D LL ACR+H
Sbjct: 69 FDLLVHDFGIAPTMDHFKCMVDLLGRSGRLLEAEELVQTMPFVPDDVTWNTLLAACRVHK 128
Query: 188 NLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILI 247
++E +RAA+ LLEL + G YV+LSN ++++ + ++R+LM R ++K PG I
Sbjct: 129 SVERGKRAAEMLLELTSEIPGYYVLLSNIHAAAGDHAEKAKVRDLMEARGVRKKPGWSTI 188
Query: 248 EVDGVVHEFV-------------------------KAGFVPNKSEVLFDMDEEEKETALN 282
E++ HEF +AG+VP+ +EVL ++E+EKE+ L
Sbjct: 189 EINDRFHEFTAGEKFQHPKKQQILEELKRLSVLMKEAGYVPDTTEVLRLVNEDEKESLLF 248
Query: 283 LHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFK 342
H+EKLAIT GL+S PG +R++KNLRVC+DCH+AT ISK+ R+ +V D NRFHH +
Sbjct: 249 FHSEKLAITCGLISTPPGTTLRVVKNLRVCSDCHSATKFISKITRRKIIVRDLNRFHHTE 308
Query: 343 NGSCSCKDFW 352
NG CSC D+W
Sbjct: 309 NGVCSCGDYW 318
>gi|242095216|ref|XP_002438098.1| hypothetical protein SORBIDRAFT_10g007970 [Sorghum bicolor]
gi|241916321|gb|EER89465.1| hypothetical protein SORBIDRAFT_10g007970 [Sorghum bicolor]
Length = 596
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 147/387 (37%), Positives = 220/387 (56%), Gaps = 54/387 (13%)
Query: 14 FREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI--------------------- 52
FRE+ + ++VT+V+ L AC LGAL+ G+ H +
Sbjct: 216 FRELPPRE-EPNEVTVVAALSACAQLGALKDGLAAHDFARTIGAVGNVRVCNALIDMYSK 274
Query: 53 ---MKKNIEVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFV 109
+ + +EV + + + +++ A I L+M G G AL+ F EM R ++PD +T++
Sbjct: 275 CGSLSRALEVFHSIKLEDRTLVSYNATIQALSMHGHGEDALKLFDEMPAR-IEPDEVTYL 333
Query: 110 GVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPM 169
VL C+HAGLVD+ F+ M + P+++HYG +V +LGRAGR+A+A ++I +MP
Sbjct: 334 AVLGGCNHAGLVDDGRRVFDSMR----VPPNMKHYGTIVDLLGRAGRLAEAHDMIMHMPF 389
Query: 170 ALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRI 229
D + LLGA ++H N++ AE AA +L +L + G YV+LSN Y+S +W V R+
Sbjct: 390 PADIVLWQTLLGAAKMHGNVDLAELAATKLADLGSNVDGDYVLLSNVYASKSRWVDVGRV 449
Query: 230 RELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GFVPNK 265
R+ M ++KK PG E+DGV+H+F+ G+ P
Sbjct: 450 RDTMRSNDVKKVPGFSYTEIDGVMHKFINGDKEHLRWREIYRALDEIGSKICELGYEPET 509
Query: 266 SEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKV 325
S VL D+ EEEK+ AL+ H+EKLAI FGL+S PG IR+IKNLR+C DCH +ISK
Sbjct: 510 SNVLHDIGEEEKQYALSYHSEKLAIAFGLISTPPGETIRVIKNLRICGDCHVVAKLISKA 569
Query: 326 YNRETVVMDRNRFHHFKNGSCSCKDFW 352
Y R ++ DR RFH F++G CSC+D+W
Sbjct: 570 YGRVIIIRDRARFHQFEDGQCSCRDYW 596
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 141/401 (35%), Positives = 229/401 (57%), Gaps = 49/401 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI--E 58
Y ++ +EAL F+++Q G+ D+VT+ ++ AC LGA++ W+ +
Sbjct: 250 YAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPS 309
Query: 59 VDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM 96
+V +G AL ++V + +++I+ AM G+ + AL+ F++M
Sbjct: 310 GNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDM 369
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
++P+ +TF+G+L ACSHAGLV++ F M + +G+ PS +HY C+V +LGRAG
Sbjct: 370 LKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGC 429
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +A +L+K MPM + V G LLGACRIH N + A+ AA +L +L P+ G+Y++LSN
Sbjct: 430 LEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNI 489
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIE-VDGVVHEFVKA---------------- 259
Y+S+ +W++V ++R+++ E+ KK PGC E +G +H+F
Sbjct: 490 YASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQ 549
Query: 260 --------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
G+ PN +D+ ++EKE L H+EKLA+ +GL+ G I+I+KN+R+
Sbjct: 550 LIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRI 609
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH S++ RE +V D RFHHF NG+CSC +FW
Sbjct: 610 CEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 16/128 (12%)
Query: 28 TMVSLLLACTHLGAL----------EVGMWLH---PYIMKKNIEVDVGL--GMALKDVMT 72
+M+ L + C LG +V W Y ++E GL + KD++
Sbjct: 183 SMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVA 242
Query: 73 LTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMS 132
TA++ A G+ +ALEYF +MQ G++ D +T GV+ AC+ G V + + ++
Sbjct: 243 WTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAV-KHANWIRDIA 301
Query: 133 EKYGIRPS 140
E+ G PS
Sbjct: 302 ERSGFGPS 309
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 218/398 (54%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLH---------PY 51
Y ++ EEA+ +F ++Q+ G+ D T+ S++ +C +L +LE G H +
Sbjct: 350 YGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISF 409
Query: 52 IMKKNIEVDVG-------------LGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
I N V + M+ D ++ TAL+ A G+ N+ L F M
Sbjct: 410 ITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLA 469
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G KPD +TF+GVL ACS AGLV + F M +++ I P +HY C++ + RAGR+
Sbjct: 470 HGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLE 529
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I MP + D LL +CR H N+E + AA+ LL+L P N SY++LS+ Y+
Sbjct: 530 EARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYA 589
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
+ KW++V +R+ M ++ ++K PGC I+ VH F
Sbjct: 590 AKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNY 649
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
V+ G+VP+ + VL D+D+ EK LN H+EKLAI FGL+ PG+ IR++KNLRVC D
Sbjct: 650 KMVQEGYVPDMNSVLHDVDDSEKIKMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGD 709
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT ISK+ RE +V D RFH FK+G CSC DFW
Sbjct: 710 CHNATKYISKITQREILVRDAARFHLFKDGRCSCGDFW 747
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 23/189 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ ++ EA+ LFRE++ + L D+ T S+L AC + AL+ G +H YI++ + + +
Sbjct: 249 FTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDN 308
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL K+V++ TA++V G +A++ F +MQ
Sbjct: 309 IFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQN 368
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD T V+ +C++ ++E + F+ + G+ I LV + G+ G I
Sbjct: 369 NGIEPDDFTLGSVISSCANLASLEEG-AQFHCRALVSGLISFITVSNALVTLYGKCGSIE 427
Query: 159 KAEELIKNM 167
+ L M
Sbjct: 428 DSHRLFSEM 436
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 145/399 (36%), Positives = 221/399 (55%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EA+ +F +++ + D T VS+L AC+ LG+L+ G WLH I+ I ++
Sbjct: 184 YEQNGLANEAVEVFNKMRESRVEPDSATFVSVLSACSQLGSLDFGCWLHDCIVGSGITMN 243
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V L +L +V+ TA+I M G G +A+E F+ M+
Sbjct: 244 VVLATSLVNMFSRCGDVGRARAVFYSMIEGNVVLWTAMISGYGMHGYGVEAMEVFHRMKA 303
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
RGV P+++TFV VL AC+HAGL+DE S F M ++YG+ P +EH+ C+V + GR G +
Sbjct: 304 RGVVPNSVTFVAVLSACAHAGLIDEGRSVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLN 363
Query: 159 KAEELIKNMPM-ALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A + +K + L V +LGAC++H N + A+ L+ P+N G YV+LSN Y
Sbjct: 364 EAYQFVKGLNSDELVPAVWTAMLGACKMHKNFDLGVEVAENLINAEPENPGHYVLLSNMY 423
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ + + +V+ +R +M +R +KK G I+VD + F
Sbjct: 424 ALAGRMDRVESVRNVMIQRGLKKQVGYSTIDVDNRSYLFSMGDKSHPETNEIYCFLDELI 483
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
AG+ P + +++ EE+E AL H+EKLA+ FGL+ GV +RI+KNLR+C
Sbjct: 484 WRCKDAGYAPVPESAMHELEGEEREYALRYHSEKLAVAFGLMKTGDGVTLRIVKNLRICE 543
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+A IS V NRE +V D+ RFHHF+ GSCSC D+W
Sbjct: 544 DCHSAIKFISAVMNREIIVRDKLRFHHFREGSCSCSDYW 582
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 23/181 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
+A+L +R + + T S++ AC L L +G +H ++ D + AL
Sbjct: 91 DAVLFYRRMLLSRIVPSTYTFTSVIKACADLSLLCIGTLVHSHVFVSGYASDSFVQAALI 150
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+ ++ ++I G N+A+E F +M+ V+PD+
Sbjct: 151 AFYAKSCTPRVARKVFDEMPQRSIVAWNSMISGYEQNGLANEAVEVFNKMRESRVEPDSA 210
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFV VL ACS G +D + + GI ++ LV + R G + +A + +
Sbjct: 211 TFVSVLSACSQLGSLDFGCWLHDCIVGS-GITMNVVLATSLVNMFSRCGDVGRARAVFYS 269
Query: 167 M 167
M
Sbjct: 270 M 270
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 145/399 (36%), Positives = 221/399 (55%), Gaps = 51/399 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI--- 57
Y++++ EA+ L+ ++ G D V++ S+L AC AL +G +H YI +K +
Sbjct: 284 YMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPN 343
Query: 58 -------------------EVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
DV M +DV++ TA+I G+G A+ F ++Q
Sbjct: 344 LLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQD 403
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD+I FV L ACSHAGL++E S F LM++ Y I P +EH C+V +LGRAG++
Sbjct: 404 SGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVK 463
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A I++M M + V G LLGACR+H + + AA +L +L P+ G YV+LSN Y+
Sbjct: 464 EAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYA 523
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ +W++V IR +M + +KK PG +EV+ ++H F+
Sbjct: 524 KAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVK 583
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPM-----PGVLIRIIKNL 309
+ G+VP+ L D++EE+KET L +H+EKLAI F L++ IRI KNL
Sbjct: 584 KMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNL 643
Query: 310 RVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSC 348
R+C DCH A +IS++ +RE ++ D NRFH F+ G CSC
Sbjct: 644 RICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSC 682
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ ++AL + RE++ ++ D TM SLL A ++ V M++ D
Sbjct: 216 YAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV-MYVK----------D 264
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+ M K +++ +I V +A+E + M+ G +PDA++ VL AC
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324
Query: 121 VD--ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ ++I + E+ + P++ L+ + + G + KA ++ +NM
Sbjct: 325 LSLGKKIHGY---IERKKLIPNLLLENALIDMYAKCGCLEKARDVFENM 370
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 208/398 (52%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV E+AL LF ++ + + T + AC LG+L+ G LH ++++ E
Sbjct: 405 YVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGS 464
Query: 61 VGLGMALK----------------------DVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
G AL D ++ A+I L G G +ALE F M
Sbjct: 465 NSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVA 524
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD I+F+ VL AC+H+GLVDE +F M +GI P +HY L+ +LGRAGRI
Sbjct: 525 EGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIG 584
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LIK MP + +L CR ++E AA QL ++ P + G+Y++LSN YS
Sbjct: 585 EARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYS 644
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ +W R+R+LM +R +KK PGC IE VH FV
Sbjct: 645 AAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLEMVGA 704
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+VP+ VL DM+ +KE L H+E+LA+ FGL+ PG + ++KNLR+C+D
Sbjct: 705 RMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLKLPPGATVTVLKNLRICDD 764
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH +SK RE VV D RFHHFK+G CSC ++W
Sbjct: 765 CHAVMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802
>gi|308080542|ref|NP_001183145.1| uncharacterized protein LOC100501514 [Zea mays]
gi|238009628|gb|ACR35849.1| unknown [Zea mays]
Length = 332
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 138/317 (43%), Positives = 193/317 (60%), Gaps = 25/317 (7%)
Query: 60 DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
D+G G +DV+ A+I AM G+ +ALE F +++ +G+ P ITF+GVL ACSH+G
Sbjct: 17 DLG-GGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGVLNACSHSG 75
Query: 120 LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGL 179
LVDE + M E+YGI P +EHYGC+V +LGRAGR+ +A +L+++M D + L
Sbjct: 76 LVDEGRALLAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVRSMKAKPDAAMWASL 135
Query: 180 LGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIK 239
LGACR+H NL +R A L+ N G+YV+LSN Y+++ KW++V R+R +M ++
Sbjct: 136 LGACRLHKNLALGQRVADYLVANGLANSGTYVLLSNMYAAAGKWREVGRVRSMMRASGVQ 195
Query: 240 KPPGCILIEVDGVVHEFVKA------------------------GFVPNKSEVLFDMDEE 275
K PGC +EV V EFV G VP+ VL D+D+
Sbjct: 196 KEPGCSAVEVGRRVVEFVAGDRSHPRSAEIYAKLEEVNSIARARGHVPHTELVLHDLDDA 255
Query: 276 EKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDR 335
KE AL +H+EKLA+ FGL+S P I+I+KNLR C DCH ++S+ R+ V DR
Sbjct: 256 AKERALAVHSEKLALAFGLISTPPRTGIKIVKNLRACADCHAVLKLVSEATGRKIVFRDR 315
Query: 336 NRFHHFKNGSCSCKDFW 352
NRFHHF +GSCSC D+W
Sbjct: 316 NRFHHFVDGSCSCGDYW 332
>gi|414879360|tpg|DAA56491.1| TPA: hypothetical protein ZEAMMB73_164599 [Zea mays]
Length = 520
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 149/379 (39%), Positives = 208/379 (54%), Gaps = 46/379 (12%)
Query: 20 KGLTGDKVTMVSLLLACTHLGALEVGMWLH---------PYIMKKNIEVDV-GLGMALKD 69
G+ D+ + + L +C AL++G +H P+ +N V + AL+D
Sbjct: 142 SGVQPDEFAVPAALSSCAASTALDLGRSVHAAAVRLGLRPFRSVENSLVSMYAKTGALRD 201
Query: 70 ------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSH 117
+T TALIV A G+G ++LE + +M G +PD +TF+G+L ACSH
Sbjct: 202 ARAVFDAMPARCTITWTALIVGYAQNGRGRQSLEVYADMVRSGCRPDYVTFIGLLFACSH 261
Query: 118 AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLG 177
AGLVD +HF M YGI P +HY C+V +LGRAGR+ +A +L+ LD V
Sbjct: 262 AGLVDAGRAHFRSMVPVYGIAPGPDHYACMVDLLGRAGRLDEAMDLLNRSSTELDATVWK 321
Query: 178 GLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERN 237
LLGACR+H N E AERAA+ + L P + YV+LSN YS +R+W V RIR LM R
Sbjct: 322 SLLGACRVHQNAELAERAAEMVWRLDPADAVPYVMLSNLYSRARRWGDVARIRALMKARG 381
Query: 238 IKKPPGCILIEVDGVVHEF-------VKA-----------------GFVPNKSEVLFDMD 273
+ K PGC + V+G+ H F +A G+VP+ L D
Sbjct: 382 VTKEPGCSWVGVNGITHLFHVEDRDHPRAAEIYRKVEEMTERIRVEGYVPDTDWALQDEV 441
Query: 274 EEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVM 333
E ++ L H+E+LA+ FGL++ IR+ KNLRVC DCHTA +++KVY RE ++
Sbjct: 442 PEWRQRGLAYHSERLAVAFGLLAVPAAAPIRVFKNLRVCGDCHTAIKMVAKVYGREIILR 501
Query: 334 DRNRFHHFKNGSCSCKDFW 352
D N FHH K+G CSC D+W
Sbjct: 502 DANCFHHMKDGECSCGDYW 520
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 78/185 (42%), Gaps = 26/185 (14%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHL-GALEVGMWLH---------PYIMKKNIE 58
AL LFRE++ +GL D+ T+ LL + L G E LH P++ N
Sbjct: 27 RALALFREMRGRGLRADEYTLPPLLNSAAQLRGPPEAVAALHALLLRAGLAPHLHVANAL 86
Query: 59 VD---------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
VD V M +DV+T T+L+ LA G A+ ++ M GV+P
Sbjct: 87 VDAYARLPHAGAAAARAVFDEMPRRDVVTWTSLLTGLARAGAHGAAVRAYHGMVASGVQP 146
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
D L +C+ + +D S + + + G+RP LV + + G + A +
Sbjct: 147 DEFAVPAALSSCAASTALDLGRS-VHAAAVRLGLRPFRSVENSLVSMYAKTGALRDARAV 205
Query: 164 IKNMP 168
MP
Sbjct: 206 FDAMP 210
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 220/391 (56%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E+AL +F E+ +G+ ++ + S L +C L AL+ G +H +K +E DV +G +L
Sbjct: 286 EDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSL 345
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
K++++ ++IV A G G AL +F +M V+PD
Sbjct: 346 IVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDE 405
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
ITF G+L ACSH+G+ + F SE ++HY C+V ILGR+G++ +AEELI+
Sbjct: 406 ITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIR 465
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
NMP+ + V LL AC +H LE AERAA+ +++L P +YV+LSN Y+S+ +W
Sbjct: 466 NMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSD 525
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GF 261
V RIR M +R I K PG I + G +EF+ G+
Sbjct: 526 VSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGY 585
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP++ L D+++E+KE L+ H+E+LAI FGL+S + G I ++KNLRVC DCH+A +
Sbjct: 586 VPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKL 645
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
I+K+ R+ +V D RFHHF +G CSC D+W
Sbjct: 646 IAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 676
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 150/391 (38%), Positives = 225/391 (57%), Gaps = 47/391 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+EAL LFR++ G+ + VT +LL + + L +L G +H I++K + + L +L
Sbjct: 225 DEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSL 284
Query: 68 KDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D+ ++ A+++ G G + ++ F M VKPD+
Sbjct: 285 IDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTM-TEEVKPDS 343
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+T + VL CSH GLVDE + F+L+ ++ I HYGC++ +LGR+G++ KA +LI+
Sbjct: 344 VTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIE 403
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MP + G LLGACR+H N+ E AQ+LL++ P N G+YVILSN Y+++ WK
Sbjct: 404 HMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWKD 463
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEF-----------------------VK-AGF 261
V R+R+LM E + K P I +D V+H F VK AGF
Sbjct: 464 VFRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKAAGF 523
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ S VL D+D+E+KE L H+EKLAITFGL++ PG+ I+++KNLR+C DCH
Sbjct: 524 VPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNFAKF 583
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+SKVY RE + D+NRFH K+G+C+C D+W
Sbjct: 584 VSKVYGREISLRDKNRFHLLKDGACTCGDYW 614
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL LF + G ++ T+ ++L +C +++ +H ++K N E
Sbjct: 117 YSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESH 176
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G +L +D ++ TA+I A G ++AL+ F ++
Sbjct: 177 MFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYS 236
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYG--IRPSIEHY----GCLVYILG 152
G++ + +TF +L + S ++ N + +G +R + + L+ +
Sbjct: 237 SGMQCNYVTFTTLLTSLSG-------LASLNYGKQVHGLILRKELPFFIVLQNSLIDMYS 289
Query: 153 RAGRIAKAEELIKNMP 168
+ G++ + + NMP
Sbjct: 290 KCGKLLYSRRVFDNMP 305
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 220/391 (56%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E+AL +F E+ +G+ ++ + S L +C L AL+ G +H +K +E DV +G +L
Sbjct: 270 EDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSL 329
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
K++++ ++IV A G G AL +F +M V+PD
Sbjct: 330 IVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDE 389
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
ITF G+L ACSH+G+ + F SE ++HY C+V ILGR+G++ +AEELI+
Sbjct: 390 ITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIR 449
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
NMP+ + V LL AC +H LE AERAA+ +++L P +YV+LSN Y+S+ +W
Sbjct: 450 NMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSD 509
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GF 261
V RIR M +R I K PG I + G +EF+ G+
Sbjct: 510 VSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGY 569
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP++ L D+++E+KE L+ H+E+LAI FGL+S + G I ++KNLRVC DCH+A +
Sbjct: 570 VPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKL 629
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
I+K+ R+ +V D RFHHF +G CSC D+W
Sbjct: 630 IAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 660
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 211/391 (53%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E+ + LF ++ G+ D+ TMV+LL ACT G +H YI + D+ + AL
Sbjct: 324 EKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATAL 383
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+D + TA++ A+ G +A++ F M GV+ D
Sbjct: 384 LNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDH 443
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TF +L ACSH+GLV+E +F +MSE Y + P ++HY C+V +LGR+GR+ A ELIK
Sbjct: 444 VTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIK 503
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MPM V G LLGACR++ N+E + A+QLL L P + +Y++LSN YS++ W+
Sbjct: 504 SMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRX 563
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
++R LM ER + + PGC IE +H FV +AG
Sbjct: 564 ASKVRXLMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIXEAGC 623
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P VL D+DEE K +N H+EKLAI FGL+ GV + I KNLR+C DCH+
Sbjct: 624 APKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKF 683
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S + R ++ D RFHHF +G CSC+D+W
Sbjct: 684 ASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 714
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 94/224 (41%), Gaps = 30/224 (13%)
Query: 6 ACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN--------- 56
AC A R G ++VT++S++ AC +GAL+ G LH ++K
Sbjct: 223 ACLNAFCRMR--TESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVN 280
Query: 57 --IEVDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
I + LG M ++ +++ +++V+ G K ++ F M+ G+ P
Sbjct: 281 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 340
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
D T V +L AC+ GL + + + G I L+ + + GR+ +E++
Sbjct: 341 DQATMVALLRACTDTGL-GRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDI 399
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNG 207
+ + D +L +H A R A +L +L+ G
Sbjct: 400 FEEIK-DRDTIAWTAMLAGYAVH----ACGREAIKLFDLMVKEG 438
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 144/397 (36%), Positives = 214/397 (53%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V + E + F +++ G+ D+ T+++LL AC HLG ++ +H + +
Sbjct: 214 VTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKI 273
Query: 62 GLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ AL D + TA++ A G G +A++ F M +
Sbjct: 274 TIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANK 333
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G++PD +TF +L ACSH+GLV+E S+FN+MSE YGI P ++HY C+V +LGR G +
Sbjct: 334 GLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLND 393
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A E+I+NMPM + V G LLGACR+H N+E + A+ L+ + P + +Y++LSN YS+
Sbjct: 394 AYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSA 453
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
SR WK ++R L+ ER +K+ PG IE H F
Sbjct: 454 SRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGK 513
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
KAG+ VL D++EE KE +N H+EKLAI FGL+ G + I KNLR+C DC
Sbjct: 514 IRKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDC 573
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H+ +IS + R ++ D RFHHF +G CSC D+W
Sbjct: 574 HSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 56/118 (47%), Gaps = 24/118 (20%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----------------- 67
++VT++S++ AC GAL+ G ++H + +K ++V + +L
Sbjct: 138 NEVTILSMISACN--GALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLF 195
Query: 68 -----KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+ ++ ++I G + ++YF +M+ G++ D T + +L AC H G+
Sbjct: 196 EAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGV 253
>gi|302764608|ref|XP_002965725.1| hypothetical protein SELMODRAFT_84657 [Selaginella moellendorffii]
gi|300166539|gb|EFJ33145.1| hypothetical protein SELMODRAFT_84657 [Selaginella moellendorffii]
Length = 502
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 152/398 (38%), Positives = 217/398 (54%), Gaps = 53/398 (13%)
Query: 8 EEALLLFREVQHKG-LTGDKVTMVSLLLACTHLGALEVGMWLH-------------PYIM 53
+EALLLF ++ G + + +T + AC + LE G +H P +
Sbjct: 105 QEALLLFHRMRKDGRVEPNAMTFTGVFNACGVVEDLEQGREIHALAMASGELKSSSPILE 164
Query: 54 KKNIEVDVGLGM---------------ALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + V G A + ++ TA+I LA GQG++ALE F EM +
Sbjct: 165 NALLNMFVRFGSLEEARKVFDAMDHPDAFSNSVSWTAMIAALAQHGQGDEALELFKEMNL 224
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ DA TF+ VL ACSHAGL+ E + F+ M E Y I P+ HY + +GRAGR+
Sbjct: 225 EGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQ 284
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
AEELI +MP + LL ACRIH E A + A+ L +L P++ +Y +L N Y+
Sbjct: 285 DAEELIHSMPFHPETVTWKTLLNACRIHSQAERATKVAELLAKLAPEDSMAYTLLGNVYA 344
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ ++ R+R+ M +R +KK P IEV VHEFV
Sbjct: 345 ATERYGDQMRVRKSMTDRGLKKVPRKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGG 404
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+VPN +VL ++EEEKE + LH+EKLAI FGL++ PG + I+KNLRVC+D
Sbjct: 405 RMREAGYVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSD 464
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT +I+K+ R VV D +RFHH ++G CSCKD+W
Sbjct: 465 CHAATKVIAKIMRRRIVVRDTHRFHHLEDGQCSCKDYW 502
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 26/129 (20%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----- 67
L+ +Q GL T+ L +C+ L + E G +H + + ++ + AL
Sbjct: 6 LYDSMQSHGLFPSDFTISVALSSCSSLKSFERGARIHRWADEHGYGSNLLVQNALVNFYA 65
Query: 68 --------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG-VKPDAI 106
+ V++ +A+I A+ G+G +AL F+ M+ G V+P+A+
Sbjct: 66 KCSKIPEAMKLFGEMSERTSRTVVSWSAMIGAYALHGRGQEALLLFHRMRKDGRVEPNAM 125
Query: 107 TFVGVLVAC 115
TF GV AC
Sbjct: 126 TFTGVFNAC 134
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 144/397 (36%), Positives = 214/397 (53%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V + E + F +++ G+ D+ T+++LL AC HLG ++ +H + +
Sbjct: 214 VTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKI 273
Query: 62 GLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ AL D + TA++ A G G +A++ F M +
Sbjct: 274 TIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANK 333
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G++PD +TF +L ACSH+GLV+E S+FN+MSE YGI P ++HY C+V +LGR G +
Sbjct: 334 GLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLND 393
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A E+I+NMPM + V G LLGACR+H N+E + A+ L+ + P + +Y++LSN YS+
Sbjct: 394 AYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSA 453
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
SR WK ++R L+ ER +K+ PG IE H F
Sbjct: 454 SRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGK 513
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
KAG+ VL D++EE KE +N H+EKLAI FGL+ G + I KNLR+C DC
Sbjct: 514 IRKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDC 573
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H+ +IS + R ++ D RFHHF +G CSC D+W
Sbjct: 574 HSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 57/118 (48%), Gaps = 24/118 (20%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----------------- 67
++VT++S++ AC+ GAL+ G ++H + +K ++V + +L
Sbjct: 138 NEVTILSMISACS--GALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLF 195
Query: 68 -----KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+ ++ ++I G + ++YF +M+ G++ D T + +L AC H G+
Sbjct: 196 EAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGV 253
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 219/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+++ +EA+ F +++ + + VT VS+L A +L A GM H I++ +
Sbjct: 608 YMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSN 667
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G +L KD ++ A++ A+ G G++A+ F MQ
Sbjct: 668 TLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQE 727
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V+ D+++FV VL AC H GLV+E F+ MS+KY I+P +EHY C+V +LGRAG
Sbjct: 728 SQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFD 787
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+ IK MP+ D V G LLG+CR+H N++ E A L++L P N +V+LS+ Y+
Sbjct: 788 ETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYA 847
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S +W + R M + +KK PGC +E+ VH F
Sbjct: 848 QSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLE 907
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+VP++S VL +++EE+KE L H+E+LAITF L++ PG I+I+KNLRVC D
Sbjct: 908 KMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCAD 967
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHT T ISK+ R +V D RFHHF++G CSC D+W
Sbjct: 968 CHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 24/233 (10%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V+ EEAL LF+E+Q++ + ++VT++S+L AC L L++G +H + +K +++ D+
Sbjct: 406 VQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDL 465
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
G AL +D++T +LI A G A++ FY++++
Sbjct: 466 STGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLS 525
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
+ PDA T VGV+ AC+ +D+ L+ K G L+ + + G +
Sbjct: 526 AINPDAGTMVGVVPACALLNDLDQGTCIHGLIV-KLGFESDCHVKNALIDMYAKCGSLPS 584
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQL-LELLPDNGGSYV 211
AE L D ++ A + + + A + Q+ LE N ++V
Sbjct: 585 AEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFV 637
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 22/134 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y EAL ++ + KGL DK T +L ACT L+ G+W H I ++ +E D
Sbjct: 104 YTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERD 163
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G L +DV+ A+I L+ +A+++F MQ+
Sbjct: 164 VFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQL 223
Query: 99 RGVKPDAITFVGVL 112
GV+P +++ + +
Sbjct: 224 VGVEPSSVSLLNLF 237
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 22/143 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + E L LF +++ + +KV+ VS LA LE G +H +++ I+ D
Sbjct: 304 YAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSD 363
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + G+ +D++ +A+I L G +AL F EMQ
Sbjct: 364 ILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQN 423
Query: 99 RGVKPDAITFVGVLVACSHAGLV 121
+ +KP+ +T + +L AC+ L+
Sbjct: 424 QKMKPNRVTLMSILPACADLSLL 446
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 74 TALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSE 133
++I Q N+ALE +Y M +G++PD TF VL AC+ A + E + F+ +
Sbjct: 98 NSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGV-WFHGEID 156
Query: 134 KYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
+ G+ + LV + + G + +A E+ MP
Sbjct: 157 RRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMP 191
>gi|297743669|emb|CBI36552.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 149/376 (39%), Positives = 201/376 (53%), Gaps = 57/376 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ E+A+ LF+E+Q + + VT+ S+L AC LGAL +G W+H I +++ E +
Sbjct: 384 YAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESN 443
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+ + + R V P +TF+ VL ACSHAGL
Sbjct: 444 I--------------------------------FMLHSR-VSPTGVTFLSVLYACSHAGL 470
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLL 180
V E F M +G P EHY C+V +LGRAG + KA + I+ MP+ V G LL
Sbjct: 471 VREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALL 530
Query: 181 GACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKK 240
GAC IH + A A+ +L EL P N G YV+LSN YS+ + + + +R ++ R + K
Sbjct: 531 GACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAK 590
Query: 241 PPGCILIEVDGVVHEFV------------------------KAGFVPNKSEVLFDMDEEE 276
PGC LIEV +H F +AGF L D++EEE
Sbjct: 591 TPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEE 650
Query: 277 KETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRN 336
KE + +H+EKLAI FGL++ PG IRIIKNLRVC DCH AT ISK+ R VV D N
Sbjct: 651 KELMVKVHSEKLAIAFGLITSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDAN 710
Query: 337 RFHHFKNGSCSCKDFW 352
RFHHFK+G CSC D+W
Sbjct: 711 RFHHFKDGICSCGDYW 726
>gi|414591914|tpg|DAA42485.1| TPA: pentatricopeptide repeat protein PPR986-12 [Zea mays]
Length = 548
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 160/401 (39%), Positives = 228/401 (56%), Gaps = 59/401 (14%)
Query: 10 ALLLFREVQHK--GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK-----NIEVDVG 62
AL LFRE+Q L D T+ S+L AC GAL +G++ H ++++ + DV
Sbjct: 149 ALDLFREMQRDRPDLAPDAYTVQSVLGACAATGALSLGLYAHALLLRELGGASAVSRDVL 208
Query: 63 LG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEM-QIR 99
+ M+ +D+ + A+++ LA G+ +L+ F M ++
Sbjct: 209 INNSLVDLYGKCGAVELARQVFDRMSERDLASWNAMVLALANHGRVQDSLDLFDRMTRVE 268
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G+ P+AITFV VL AC+H GLVDE +F M ++GIRP IEHYGC+V IL RAG I +
Sbjct: 269 GLVPNAITFVAVLSACNHGGLVDEGRRYFAAMVSEHGIRPRIEHYGCMVDILARAGFIEE 328
Query: 160 AEELIKNMPMALDHFVLGGLLGA-CRIHDNLEAAERAAQQLLELLPDNG--GSYVILSNR 216
A +++ M D + LL A C+ + LE +E A+ L+ +PD+ G YV+LS
Sbjct: 329 ALDVVAGMNCRPDSIIWRSLLDACCKRNAGLELSEAMAKLALD-VPDDAVSGVYVLLSRV 387
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+S+++W V IR+LM++ KK PG IE+DG VH+FV
Sbjct: 388 YASAQRWNDVGMIRQLMSQEGFKKEPGFSSIEMDGSVHQFVAGDTSHPQSEEIYVKLDEI 447
Query: 258 -----KAGFVPNKSEVLFDMD-EEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
AG+ P+ SE D + K L LH+E+LAI+FGL++ PG IRI+KNLRV
Sbjct: 448 QQRLTSAGYKPDLSEAPMVADIDRTKGATLRLHSERLAISFGLLNATPGAPIRILKNLRV 507
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCHT + +ISK+YN E +V DR RFHHFK+GSCSCKD+W
Sbjct: 508 CKDCHTISKLISKLYNVEIIVRDRIRFHHFKDGSCSCKDYW 548
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 149/393 (37%), Positives = 225/393 (57%), Gaps = 48/393 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEAL +F+ +Q +G+ + VT SLL A + L L+ G H +++++ + L +L
Sbjct: 235 EEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSL 294
Query: 68 KDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI-RGVKPD 104
D+ ++ A++V + G G + LE F M+ + VKPD
Sbjct: 295 IDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 354
Query: 105 AITFVGVLVACSHAGLVDERISHFN-LMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
A+T + VL CSH + D +S ++ +++ +YGI+P EHYGC+V +LGRAGRI +A E
Sbjct: 355 AVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEF 414
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
IK MP VLG LLGACR+H +++ E +L+E+ P+N G+YVILSN Y+S+ +W
Sbjct: 415 IKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGRW 474
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVHEF------------------------VKA 259
+ V +R +M ++ + K PG I+ + +H F +A
Sbjct: 475 EDVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQA 534
Query: 260 GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
G+VP+ S VL+D+DEE+KE L H+EKLA+TFGL++ G+ IR+ KNLR+C DCH
Sbjct: 535 GYVPDISCVLYDVDEEQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCHNFA 594
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
I SKV+ RE + D+NRFH G CSC D+W
Sbjct: 595 KIFSKVFEREVSLRDKNRFHQIVKGICSCGDYW 627
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 88/191 (46%), Gaps = 25/191 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL +F E+ ++ T ++L +C L +G +H I+K N +
Sbjct: 127 YSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSH 186
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G +L +DV++ TA+I A G +ALE F +Q
Sbjct: 187 IFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQS 246
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G++P+ +T+ +L A S L+D + +H +++ + +++ L+ + + G +
Sbjct: 247 EGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN--SLIDMYSKCGNL 304
Query: 158 AKAEELIKNMP 168
+ A+ L NMP
Sbjct: 305 SYAQRLFDNMP 315
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHA-GLVDE 123
M K+V++ TA+I + G ++AL F EM KP+ TF VL +C A GL
Sbjct: 112 MPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALG 171
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
+ H ++ K+ I L+ + +AG+I +A E+ + +P
Sbjct: 172 KQIHGLIV--KWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLP 214
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 147/390 (37%), Positives = 217/390 (55%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LFRE+Q +G+ + VT+ LL AC ++ AL G H + ++ I DV +G AL
Sbjct: 327 EALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALI 386
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+++++ +L+ AM G+ +A+ F MQ G KPD +
Sbjct: 387 DMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHV 446
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
+F VL AC+ GL +E +F+ MS +G+ +EHY C+V +LGR+GR+ +A +IK
Sbjct: 447 SFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQ 506
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP D V G LL +CR+H+ ++ E AA+++ EL P N G+Y++LSN Y+S W +V
Sbjct: 507 MPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEV 566
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVH------------------------EFVKAGFV 262
+R++M R +KK PG IE+ VH E K+G+V
Sbjct: 567 DMVRDMMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYV 626
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ VL D++E++KE L H+EKLA+ GL++ PG +++IKNLR+C DCH I
Sbjct: 627 PHTDFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTKPGFPLQVIKNLRICRDCHAVIKFI 686
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S RE V D NRFH FK G CSC D+W
Sbjct: 687 SDFEKREIFVRDTNRFHQFKGGVCSCGDYW 716
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 91/216 (42%), Gaps = 58/216 (26%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI----------- 57
+A+L+F+ + +GL D ++ S+L A L +G+ +H Y++K+ +
Sbjct: 193 DAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALI 252
Query: 58 --------------------EVDVGLGMALK------------------------DVMTL 73
EVDVG AL +V++
Sbjct: 253 DMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSW 312
Query: 74 TALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSH-AGLVDERISHFNLMS 132
T++I + G+ +ALE F EMQI GVKP+++T +L AC + A L+ + +H S
Sbjct: 313 TSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAH--CFS 370
Query: 133 EKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
+ GI + L+ + + GR+ + MP
Sbjct: 371 LRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMP 406
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 226/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ EEA L+F+++Q + D TMVSL+ AC+HL AL+ G H ++ + + ++
Sbjct: 382 YVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALE 441
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ M +D+++ +I + G G +A F M+
Sbjct: 442 TSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKN 501
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+G +PD +TF+ ++ ACSH+GLV E F+ M+ KYGI P +EHY C+V +L R G +
Sbjct: 502 QGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLD 561
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I++MP+ D V G LLGACRIH N++ ++ ++ + +L P+ G++V+LSN +S
Sbjct: 562 EAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFS 621
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ ++ + +R + + KK PGC IE++G +H FV
Sbjct: 622 AAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILI 681
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+ + S VL D++EEEKE AL H+EKLAI FG++S I + KNLRVC D
Sbjct: 682 DIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGD 741
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA ++ V NR +V D NRFHHFKNG CSC DFW
Sbjct: 742 CHTAIKYMTLVRNRTIIVRDANRFHHFKNGQCSCGDFW 779
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 26/184 (14%)
Query: 9 EALLLFREVQHKGLTGDKVTMV-SLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG--- 64
EA LF+++ +G+ T V S L C L L +G LH + K I D+ G
Sbjct: 288 EAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSL 347
Query: 65 -------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+A+KD ++ AL+ G+ +A F +MQ V+PD
Sbjct: 348 LSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDI 407
Query: 106 ITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
T V ++ ACSH A L R SH +++ + SI L+ + + GRI + ++
Sbjct: 408 ATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSI--CNSLIDMYAKCGRIDLSRQVF 465
Query: 165 KNMP 168
MP
Sbjct: 466 DKMP 469
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKD 69
A+ L+R + + + +K T +L AC+ L L G +H + VGL D
Sbjct: 83 AIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAH------AAAVGLH---TD 133
Query: 70 VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFN 129
+ TALI + C + A F +M +R D + + +L ++ G+ I+H
Sbjct: 134 LFVSTALIDLYIRCARFGPAANVFAKMPMR----DVVAWNAMLAGYANHGMYHHAIAHLL 189
Query: 130 LMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
M ++ G+RP+ L+ +L + G + + +
Sbjct: 190 DMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSV 223
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 143/398 (35%), Positives = 220/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + EEAL +F ++ G+ + T VS + A +L ++ G +H ++K +
Sbjct: 522 FAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSE 581
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL ++ ++ +I + G G +AL+ F +M+
Sbjct: 582 TEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQ 641
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KP+ +TF+GVL ACSH GLV+E + +F MS ++GI P +HY C+V ILGRAG++
Sbjct: 642 EGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLD 701
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + ++ MP++ + V LL ACR+H N+E E AA+ LLEL P + SYV+LSN Y+
Sbjct: 702 RARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYA 761
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
+ KW +R++M +R ++K PG IEV VVH F
Sbjct: 762 VTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDD 821
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G++ + + ++E+K+ +H+EKLA+ FGL+S P + +R+IKNLRVCND
Sbjct: 822 RLAKIGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSMPLRVIKNLRVCND 881
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHT S+V RE V+ D RFHHF NG+CSC DFW
Sbjct: 882 CHTWMKFTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 105/227 (46%), Gaps = 30/227 (13%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E AL +F E++ G T D VT+ SLL AC +G L G LH Y++K + D + +L
Sbjct: 226 ESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSL 285
Query: 68 KDVMTLTALIV-------------------VLAMCGQGN---KALEYFYEMQIRGVKPDA 105
D+ +IV +L GQ + K+ + F +M GV+P+
Sbjct: 286 LDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNE 345
Query: 106 ITFVGVLVACSHAGLVD--ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
T+ +L C++AG ++ E+I +L+S K G + G L+ + + G + KA +
Sbjct: 346 FTYPCLLRTCTYAGEINLGEQI---HLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRI 402
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQ--QLLELLPDNGG 208
++ + A D ++ H+ + A + QL + PDN G
Sbjct: 403 LEVLE-AKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIG 448
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 25/189 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEA+ L+ ++ G+ + S+L ACT E G +H + K+ +
Sbjct: 118 YARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSE 177
Query: 61 VGLGMALK----------------------DVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL D +T LI A CG G ALE F EM++
Sbjct: 178 TVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRL 237
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G PD +T +L AC+ G +++ + H L+ K G+ P G L+ + + G I
Sbjct: 238 SGWTPDCVTIASLLAACASIGDLNKGKQLHSYLL--KAGMSPDYIIEGSLLDLYVKCGVI 295
Query: 158 AKAEELIKN 166
+A E+ K+
Sbjct: 296 VEALEIFKS 304
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 97/235 (41%), Gaps = 27/235 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ C+EAL F+++Q G+ D + + S + AC + A+ G +H + D
Sbjct: 421 YVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSAD 480
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL KD +T ++ A G +ALE F +M
Sbjct: 481 VSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQ 540
Query: 99 RGVKPDAITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GVK + TFV + A ++ A + + H ++ K G E L+ + G+ G I
Sbjct: 541 AGVKYNVFTFVSSISASANLADIKQGKQIHATVI--KTGCTSETEVANALISLYGKCGSI 598
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHD-NLEAAERAAQQLLELLPDNGGSYV 211
A+ M +H ++ +C H LEA + Q E L N +++
Sbjct: 599 EDAKMQFFEMS-ERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFI 652
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 27/189 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + S ++ LF ++ G+ ++ T LL CT+ G + +G +H +K E D
Sbjct: 320 YGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESD 379
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + L KDV++ T++I +ALE F +MQ+
Sbjct: 380 MYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQL 439
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKY--GIRPSIEHYGCLVYILGRAGR 156
G+ PD I + AC AG+ R + S Y G + + LV + R GR
Sbjct: 440 FGIWPDNIGLASAISAC--AGIKAMRQGQ-QIHSRVYVSGYSADVSIWNALVNLYARCGR 496
Query: 157 IAKAEELIK 165
+A L +
Sbjct: 497 SKEAFSLFE 505
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 149/410 (36%), Positives = 212/410 (51%), Gaps = 66/410 (16%)
Query: 9 EALLLFREVQHKGLTGD------------------KVTMVSLLLACTHLGALEVGMWLHP 50
+A L RE+Q +G D VT+++LL C L A G +H
Sbjct: 460 DAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHG 519
Query: 51 YIMKKNIEVDVGLGMALKD----------------------VMTLTALIVVLAMCGQGNK 88
Y M+ ++ D+ +G AL D V+T LI+ M G G++
Sbjct: 520 YAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDE 579
Query: 89 ALEYFYEMQIRG-VKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCL 147
A+ F M + KP+ +TF+ L ACSH+G+VD + F+ M +G++P+ + + C
Sbjct: 580 AIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACA 639
Query: 148 VYILGRAGRIAKAEELIKNM-PMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDN 206
V ILGRAGR+ +A +I +M P LGACR+H N+ E AA++L +L PD
Sbjct: 640 VDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDE 699
Query: 207 GGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------- 259
YV+L N YS++ W+K +R M +R + K PGC IE+DGV+H F+
Sbjct: 700 ASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPES 759
Query: 260 -----------------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVL 302
G+ P+ S VL D++E EK L H+EKLAI FGL+ PG
Sbjct: 760 TLVHAHMDALWERMRNQGYTPDTSSVLHDIEESEKAAILRYHSEKLAIAFGLLRTPPGAT 819
Query: 303 IRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IR+ KNLRVCNDCH A IS++ RE V+ D RFHHF +G+CSC D+W
Sbjct: 820 IRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFVDGACSCGDYW 869
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 30/138 (21%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGA-LEVGMWLHPYIMKK-----------NI 57
AL R++ +G T+VS+LLAC+HL L +G H + +K N
Sbjct: 146 ALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNA 205
Query: 58 EVDVGLGMALKD------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ + + L D V+T ++ +L G+ +A+E Y+M R
Sbjct: 206 LLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVAR 265
Query: 100 GVKPDAITFVGVLVACSH 117
GV+PD ITF L ACS
Sbjct: 266 GVRPDGITFASALPACSQ 283
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK-KNIEVD 60
V+ C EA+ + ++ +G+ D +T S L AC+ L L +G +H Y++K ++ +
Sbjct: 247 VQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAAN 306
Query: 61 VGLGMALKDVMT------------------------LTALIVVLAMCGQGNKALEYFYEM 96
+ AL D+ A++ A G +ALE F M
Sbjct: 307 SFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARM 366
Query: 97 QIR-GVKPDAITFVGVLVACSHA 118
+ GV P T GVL AC+ +
Sbjct: 367 EAEAGVVPSETTIAGVLPACARS 389
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 224/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----KN 56
Y E EAL LF E+Q + + D++TM+S++ AC ++GAL W+H Y K +
Sbjct: 324 YAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRT 383
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ ++ L M K+V++ +++I AM G + A+ F+ M+
Sbjct: 384 LPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKE 443
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ ++P+ +TF+GVL ACSHAGLV+E F+ M ++ I P EHYGC+V + RA +
Sbjct: 444 QNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLR 503
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
KA ELI+ MP + + G L+ AC+ H +E E AA +LLEL PD+ G+ V+LSN Y+
Sbjct: 504 KAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYA 563
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
++W V +R+LM + + K C IEV+ VH F+ A
Sbjct: 564 KEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQSDEIYKKLDAVVS 623
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P+ S +L D++EEEK+ + H+EKLA+ +GL+ IRI+KNLR+C D
Sbjct: 624 QLKLVGYTPSTSGILVDLEEEEKKEVVLWHSEKLALCYGLIGERKESCIRIVKNLRICED 683
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+ ++SKV+ E V+ DR RFHHF G CSC+D+W
Sbjct: 684 CHSFMKLVSKVHRIEIVMRDRTRFHHFNGGICSCRDYW 721
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 111/269 (41%), Gaps = 64/269 (23%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
Y +++ + L L+ E++ G D + + ++L AC H G L G +H +I
Sbjct: 192 YSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVG 251
Query: 56 --------NIEVDVG-----------------------------LGMAL----------- 67
N+ + G LGM
Sbjct: 252 SHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVE 311
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG-LVDERIS 126
KD++ +A+I A Q +AL+ F EMQ R + PD IT + V+ AC++ G LV +
Sbjct: 312 KDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWI 371
Query: 127 HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIH 186
H ++K G ++ L+ + + G + KA E+ +NMP + ++ A +H
Sbjct: 372 H--TYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRK-NVISWSSMINAFAMH 428
Query: 187 DNLEAA----ERAAQQLLELLPDNGGSYV 211
+ ++A R +Q +E NG +++
Sbjct: 429 GDADSAIALFHRMKEQNIE---PNGVTFI 454
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 24/184 (13%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLH------------PYIMKK 55
E L L+ ++ G D+ + LL A + L AL +G+ +H P+I
Sbjct: 97 ENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASKFGFFHADPFIQSA 156
Query: 56 NIEVDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
I + G M+ +DV+T +I + + L+ + EM+ G +PD
Sbjct: 157 LIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPD 216
Query: 105 AITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
AI VL AC+HAG + + + + G R LV + G + A E+
Sbjct: 217 AIILCTVLSACAHAGNLSYGKAIHQFIKDN-GFRVGSHIQTSLVNMYANCGAMHLAREVY 275
Query: 165 KNMP 168
+P
Sbjct: 276 DQLP 279
>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Glycine max]
Length = 650
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 218/391 (55%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
E L FR +Q +G+ +T+ ++L C + AL G +H I+K DV L +L
Sbjct: 260 ETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKEIHGQILKSRKNADVPLLNSLM 319
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
KD+ + ++ ++ GQ ++AL F EM G++P+ I
Sbjct: 320 DMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDEMIRYGIEPNGI 379
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFV +L CSH+GL E F+ + + +G++PS+EHY CLV ILGR+G+ +A + +N
Sbjct: 380 TFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILGRSGKFDEALSVAEN 439
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
+PM + G LL +CR++ N+ AE A++L E+ P+N G+YV+LSN Y+++ W+ V
Sbjct: 440 IPMRPSGSIWGSLLNSCRLYGNVALAEVVAERLFEIEPNNPGNYVMLSNIYANAGMWEDV 499
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFVKA-------------------------GF 261
KR+RE+MA +KK GC I++ +H FV G+
Sbjct: 500 KRVREMMALTGMKKDAGCSWIQIKHKIHTFVAGGSSDFRCSAEYKKIWNELSNAVKNLGY 559
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VPN VL D++EE K + H+E+LA F L++ G+ IRI KNLRVC DCH+
Sbjct: 560 VPNTGVVLHDINEEMKAVWVCEHSERLAAVFALINTGAGMPIRITKNLRVCVDCHSWMKA 619
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+SKV R V+ D NRFHHF+NGSCSCKD+W
Sbjct: 620 VSKVTRRLIVLRDTNRFHHFENGSCSCKDYW 650
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 146/396 (36%), Positives = 223/396 (56%), Gaps = 44/396 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + S +EAL L++ ++ G D+ T+ S+L ACT L LE+G H +++K + ++
Sbjct: 459 FAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLKFDQDLI 518
Query: 61 VGLG--------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG 100
+ MA KDV++ + +I LA G +AL F M+++G
Sbjct: 519 LNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQG 578
Query: 101 VKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA 160
KP+ IT +GVL ACSHAGLV+E +F M+ YGI P EHYGC++ +LGRA ++
Sbjct: 579 PKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDM 638
Query: 161 EELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSS 220
+LI M D LL ACR N++ A AA+++L+L P + G+YV+LSN Y+ S
Sbjct: 639 VKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLDPQDTGAYVLLSNIYAIS 698
Query: 221 RKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV----------------------- 257
++W V +R M +R I+K PGC IEV+ +H F+
Sbjct: 699 KRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKSHPQIDEINRQLNQFICRL 758
Query: 258 -KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCH 316
AG+VP+ + VL D++ E++E +L H+EKLAI FG++S IRI KNL++C DCH
Sbjct: 759 AGAGYVPDTNFVLQDLEGEQREDSLRYHSEKLAIVFGIMSFPKEKTIRIWKNLKICGDCH 818
Query: 317 TATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+I+++ R V+ D R+HHF++G CSC D+W
Sbjct: 819 KFAKLIAELEQRHIVIRDPIRYHHFQDGVCSCGDYW 854
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 83/206 (40%), Gaps = 27/206 (13%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK------------- 55
A+ + ++ +G+ D +T L+ C GA+ G +H +I
Sbjct: 268 SAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILI 327
Query: 56 NIEVDVGL---------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
N+ V L M ++V++ T +I + ++A+ M GV P+
Sbjct: 328 NMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMF 387
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF VL AC L D + H +M K G+ + L+ + + G + +A ++ +
Sbjct: 388 TFSSVLRACER--LYDLKQLHSWIM--KVGLESDVFVRSALIDVYSKMGELLEALKVFRE 443
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAA 192
M M D V ++ A H + + A
Sbjct: 444 M-MTGDSVVWNSIIAAFAQHSDGDEA 468
>gi|297720639|ref|NP_001172681.1| Os01g0884800 [Oryza sativa Japonica Group]
gi|20161229|dbj|BAB90156.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|255673935|dbj|BAH91411.1| Os01g0884800 [Oryza sativa Japonica Group]
Length = 517
Score = 270 bits (690), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 210/390 (53%), Gaps = 47/390 (12%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-- 67
A+ +R++ G+ D+ + ++L +C ALE+G +H ++ E + +G +L
Sbjct: 128 AVRAYRDMVAAGVATDEFAVAAVLSSCAGSTALELGRSVHAAAVRSGHEPFLSVGNSLVS 187
Query: 68 --------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
+ +T TALIV A G+G ++L + +M G +PD +T
Sbjct: 188 MYAKTGSLRDARTVFDAMRSRCAITWTALIVGYAQNGRGRESLAVYADMARSGCRPDYVT 247
Query: 108 FVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
FVG+L ACSHAGL+D +HF M ++GI P +HY C+V +LGRAGR+ +A +L+
Sbjct: 248 FVGLLFACSHAGLLDAGRAHFQSMQSEHGISPGPDHYACMVDLLGRAGRLGEAVDLLDRS 307
Query: 168 PMA-LDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
P A LD V LL ACR H N AERAA + L P + YV+LSN YS +R+W V
Sbjct: 308 PAAELDATVWKALLAACRTHRNAALAERAAGMVWRLDPTDAMPYVMLSNLYSRARRWGDV 367
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEF-----------------------VKA-GFV 262
R+R LM R I K PGC + V GV H F ++A G V
Sbjct: 368 ARVRALMRSRGISKEPGCSWVVVAGVTHVFHAGDRDHQRAAEIYRKAEEMAARIRARGHV 427
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ L D E +E L H E+LA+ FGL++ IR+ KNLRVC DCH A ++
Sbjct: 428 PDTEWALQDEAPEGREMGLAHHGERLAVAFGLLAVPAAAPIRVYKNLRVCGDCHAAIKMV 487
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
++VY RE ++ D N FHH K+GSCSC D+W
Sbjct: 488 AEVYGREIILRDSNCFHHMKDGSCSCGDYW 517
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 270 bits (690), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 211/391 (53%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E+ + LF ++ G+ D+ TMV+LL ACT G +H YI + D+ + AL
Sbjct: 304 EKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATAL 363
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+D + TA++ A+ G +A++ F M GV+ D
Sbjct: 364 LNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDH 423
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TF +L ACSH+GLV+E +F +MSE Y + P ++HY C+V +LGR+GR+ A ELIK
Sbjct: 424 VTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIK 483
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MPM V G LLGACR++ N+E + A+QLL L P + +Y++LSN YS++ W+
Sbjct: 484 SMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRD 543
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
++R LM ER + + PGC IE +H FV +AG
Sbjct: 544 ASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGC 603
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P VL D+DEE K +N H+EKLAI FGL+ GV + I KNLR+C DCH+
Sbjct: 604 APKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKF 663
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S + R ++ D RFHHF +G CSC+D+W
Sbjct: 664 ASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 694
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 94/224 (41%), Gaps = 30/224 (13%)
Query: 6 ACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK---------- 55
AC A R G ++VT++S++ AC +GAL+ G LH ++K
Sbjct: 203 ACLNAFCRMR--TESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVN 260
Query: 56 ---NIEVDVGL---------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
N+ +G M ++ +++ +++V+ G K ++ F M+ G+ P
Sbjct: 261 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 320
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
D T V +L AC+ GL + + + G I L+ + + GR+ +E++
Sbjct: 321 DQATMVALLRACTDTGL-GRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDI 379
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNG 207
+ + D +L +H A R A +L +L+ G
Sbjct: 380 FEEIK-DRDRIAWTAMLAGYAVH----ACGREAIKLFDLMVKEG 418
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 270 bits (690), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 211/391 (53%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E+ + LF ++ G+ D+ TMV+LL ACT G +H YI + D+ + AL
Sbjct: 247 EKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATAL 306
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+D + TA++ A+ G +A++ F M GV+ D
Sbjct: 307 LNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDH 366
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TF +L ACSH+GLV+E +F +MSE Y + P ++HY C+V +LGR+GR+ A ELIK
Sbjct: 367 VTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIK 426
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
+MPM V G LLGACR++ N+E + A+QLL L P + +Y++LSN YS++ W+
Sbjct: 427 SMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRD 486
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
++R LM ER + + PGC IE +H FV +AG
Sbjct: 487 ASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGC 546
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P VL D+DEE K +N H+EKLAI FGL+ GV + I KNLR+C DCH+
Sbjct: 547 APKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKF 606
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S + R ++ D RFHHF +G CSC+D+W
Sbjct: 607 ASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 637
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 94/224 (41%), Gaps = 30/224 (13%)
Query: 6 ACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK---------- 55
AC A R G ++VT++S++ AC +GAL+ G LH ++K
Sbjct: 146 ACLNAFCRMR--TESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVN 203
Query: 56 ---NIEVDVGL---------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
N+ +G M ++ +++ +++V+ G K ++ F M+ G+ P
Sbjct: 204 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 263
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
D T V +L AC+ GL + + + G I L+ + + GR+ +E++
Sbjct: 264 DQATMVALLRACTDTGL-GRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDI 322
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNG 207
+ + D +L +H A R A +L +L+ G
Sbjct: 323 FEEIK-DRDRIAWTAMLAGYAVH----ACGREAIKLFDLMVKEG 361
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 270 bits (690), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 141/390 (36%), Positives = 219/390 (56%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
+AL +F ++ + D+++++ L AC+ + AL +G LH + +K ++ + +L
Sbjct: 586 DALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLI 645
Query: 69 DV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
D+ +T LI + G G KA+E F MQ G +PD++
Sbjct: 646 DMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSV 705
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF+ +L AC+HAGLV E + + M +GI+P +EHY C+V +LGRAGR+ +A EL+
Sbjct: 706 TFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNE 765
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
+P D + LL +CR + +L+ E+ A +LLEL PD +YV++SN Y+ KW +V
Sbjct: 766 LPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEV 825
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGFV 262
+++R+ M E ++K GC IE+ G V F+ K G+
Sbjct: 826 RKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIELEKKINKIGYK 885
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ S VL +++E+EK L H+EKLAI+FGL++ G +R+ KNLR+C DCH A ++
Sbjct: 886 PDTSCVLHELEEDEKIKILRNHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLV 945
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SK+ RE +V D RFHHFKNG CSC D+W
Sbjct: 946 SKIDKREIIVRDNKRFHHFKNGFCSCGDYW 975
>gi|356565103|ref|XP_003550784.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g47530-like [Glycine max]
Length = 515
Score = 270 bits (689), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 155/400 (38%), Positives = 220/400 (55%), Gaps = 49/400 (12%)
Query: 2 VEDSACEEALLLFREVQHKGLT--GDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
+ ++ +AL LF +Q+ D VT + LL AC HL ALE G +H Y+M+
Sbjct: 116 IRNNRTRDALSLFDVLQNSSYKCEPDDVTCLLLLQACAHLYALEFGERIHGYMMEHGYGG 175
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ L AL K+V++ +A+I LAM G G +A+E F EM
Sbjct: 176 ALNLSNALISMYSRCGCLDKAXEVFKGTGNKNVVSWSAMISGLAMNGYGREAIESFEEML 235
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
G++PD T GVL ACS++G+VDE +S F+ MS ++G+ P++ HYGC+V +LG AG
Sbjct: 236 RIGIRPDDQTLTGVLSACSYSGMVDEGMMSFFDRMSREFGVTPNVHHYGCMVDLLGHAGL 295
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ KA +LI +M D LLGACRIH ++ ER L+EL G +V+L N
Sbjct: 296 LDKAXQLIMSMVEKPDSTTWRTLLGACRIHGHVTLGERVIGHLIELKAQEAGDHVLLLNI 355
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------ 258
YSS+ W+KV +R+LM ++I+ PGC IE+ GVVHEFV
Sbjct: 356 YSSAGHWEKVAEVRKLMKNKSIQTTPGCSTIELKGVVHEFVVDDVSHTRNHEIYETLDEI 415
Query: 259 ------AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
AG+V S L MD++EK L+ H+EKLAI FG+++ PG +R+ NLR+C
Sbjct: 416 NHQLRIAGYVVELSSELHKMDDKEKGYVLSHHSEKLAIAFGVLATPPGTTLRVANNLRIC 475
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DC S VYN + ++ D NRFHHF+ G CSC ++W
Sbjct: 476 VDCFNFLKHFSGVYNGDVILRDHNRFHHFRGGCCSCSNYW 515
>gi|296085848|emb|CBI31172.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 270 bits (689), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 204/375 (54%), Gaps = 67/375 (17%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V++ +E L F+++ + + V+ S++ AC HL L +G LH YI++
Sbjct: 313 VQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIR------- 365
Query: 62 GLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLV 121
+ GVKP+ + F+ VL ACSHAGLV
Sbjct: 366 ------------------------------------MEGVKPNYVAFMAVLTACSHAGLV 389
Query: 122 DERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLG 181
DE +FN M++ Y I P +EHY + +LGR GR+ +A E I +M + V LL
Sbjct: 390 DEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLA 449
Query: 182 ACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKP 241
ACR+H N+E AE+ +++L + P N G+YV+LSN YS++ +WK +++R M ++ +KK
Sbjct: 450 ACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKK 509
Query: 242 PGCILIEVDGVVHEFV------------------------KAGFVPNKSEVLFDMDEEEK 277
P C IE+ VH FV + G+V + +EVL D++EE+K
Sbjct: 510 PACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQK 569
Query: 278 ETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNR 337
L H+E+LAITFG++S G IR+ KNLRVC DCHTAT ISK+ RE VV D +R
Sbjct: 570 RYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSR 629
Query: 338 FHHFKNGSCSCKDFW 352
FHHFK+G CSC DFW
Sbjct: 630 FHHFKDGKCSCGDFW 644
>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
Length = 879
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/391 (38%), Positives = 214/391 (54%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG---- 64
EALLLF+++Q G D ++ V+ L AC +L G LH I + +E ++ +
Sbjct: 489 EALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVL 548
Query: 65 ------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
M L DV++ +I A G ++ L +F M G P+ +
Sbjct: 549 NMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDV 608
Query: 107 TFVGVLVACSHAGLVDERISHF-NLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
TFV V+ ACSH GLV + + F +L+ + I P EHY C+V ++ RAG++ AE+ I
Sbjct: 609 TFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIA 668
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
P+ D + +LGA ++H ++E A ++A+ L+EL PD +YV+LSN Y K +
Sbjct: 669 AAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDE 728
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEF------------------------VKAGF 261
+IR LM E+NI+K P I V VHEF KAG+
Sbjct: 729 GAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLEMAKAGY 788
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P+ + +L D+ +E+K+ L+ H+EKLAI FGL+S PG +RIIKNLRVC DCHTAT
Sbjct: 789 TPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGDCHTATKF 848
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISK+ RE VV D +RFHHF NG+CSC D+W
Sbjct: 849 ISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 27/216 (12%)
Query: 3 EDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVG 62
+ S EAL L +Q G+ DK++ V+ L C AL G +H +I++ I+ DV
Sbjct: 381 QHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVESGIKADVM 440
Query: 63 L----------------------GMALKDVMTLTALIVVLAMCGQ-GNKALEYFYEMQIR 99
L M +D ++ A+I A + ++AL F +MQ+
Sbjct: 441 LDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLH 500
Query: 100 GVKPDAITFV-GVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G PD I+FV + + A L + ++ H + + G+ ++ ++ + ++G +
Sbjct: 501 GFMPDVISFVAALSACAAQASLAEGKLLHDRI--RETGLESNMTVANAVLNMYAKSGSLV 558
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAER 194
A ++ MP+ D G++ A H + + R
Sbjct: 559 LARKMFGKMPLP-DVISWNGMISAFAQHGHADQVLR 593
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 60/132 (45%), Gaps = 23/132 (17%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACT-HLGALEVGMWLHPYIMKKNIEVD------ 60
E+AL LFR +Q +G+ V++L AC+ LE G +H + +E D
Sbjct: 81 EQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTT 140
Query: 61 ----------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
V G+ K V+ A+I A +A++ FY M + GVK +
Sbjct: 141 LLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAE 200
Query: 105 AITFVGVLVACS 116
ITF+GVL ACS
Sbjct: 201 RITFIGVLDACS 212
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 22/138 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EAL LF+ + +G+ D++ +++L AC+ LE G +H ++ + +
Sbjct: 278 YTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRH 337
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V G AL +DV++ +I Q +AL + MQ+
Sbjct: 338 VNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQL 397
Query: 99 RGVKPDAITFVGVLVACS 116
GVK D I+FV L C+
Sbjct: 398 DGVKADKISFVNALPLCA 415
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 26/191 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWL--------HPYI 52
Y + E+A+ +F + +G+ +++T + +L AC+ L LEV + H ++
Sbjct: 176 YAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHL 235
Query: 53 MKKNIEVDV--------GLGMALK-------DVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ + L A + +++ TA+I + ++ALE F M
Sbjct: 236 HDSSFATALVNFYGSCGDLEQAFRAFSRHRLELILATAMITQYTQRERWDEALELFKVML 295
Query: 98 IRGVKPDAITFVGVLVACSHA-GLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ GVK D I + VL ACS GL + R+ H M E R + L+ + G+ G
Sbjct: 296 LEGVKLDRIACMAVLNACSGPRGLEEGRMIH-GFMREIRFDR-HVNAGNALINMYGKCGS 353
Query: 157 IAKAEELIKNM 167
+ +A E+ ++M
Sbjct: 354 LEEAVEVFRSM 364
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 26/52 (50%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACS 116
M ++D +T LI G +AL F MQ+ GV P FV VL ACS
Sbjct: 59 MPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACS 110
>gi|357496515|ref|XP_003618546.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493561|gb|AES74764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 637
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 162/409 (39%), Positives = 228/409 (55%), Gaps = 58/409 (14%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK---- 55
YV + +EA LL +E V G VT+ S+L AC+ G + VG W+H Y +K+
Sbjct: 230 YVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLSACSQSGDVCVGRWVHCYAVKEMGLD 289
Query: 56 -------------------NIEVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
N + V M ++V+ A++ LAM G G A++ F M
Sbjct: 290 FGVMVGTSLVDMYAKCGRINAALSVFRSMLKRNVVAWNAMLGGLAMHGMGKIAVDMFPSM 349
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ VKPD +TF+ +L ACSH+GLV++ +F+ + Y I+P IEHY C+V +LGRAGR
Sbjct: 350 -VEEVKPDGVTFMALLSACSHSGLVEKGWDYFHDLEPVYRIKPEIEHYACMVGLLGRAGR 408
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +AE ++KNM + + VLG L+G+C H L+ E+ + LLE+ P N +++LSN
Sbjct: 409 LEEAEIMVKNMRIPPNEVVLGSLIGSCYAHGRLQLGEKIMRDLLEMDPLNTEYHIVLSNM 468
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+ S K +K +R+++ +R IKK PG I VDG +H+F+
Sbjct: 469 YALSGKVEKANSLRQVLKKRGIKKVPGMSSIYVDGKLHQFIAGDKSHTRTSEIYMKLDEM 528
Query: 258 -----KAGFVPNKS-EVLF------DMDE--EEKETALNLHTEKLAITFGLVSPMPGVLI 303
AG+VPN S +VLF D E EE E L H+EKLA+ FGL+S G +
Sbjct: 529 ICRLRSAGYVPNTSCQVLFGCSNRDDCSESLEEVEQVLFTHSEKLALCFGLMSTPSGSPL 588
Query: 304 RIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
I KNLR+C DCH+A I SKVY RE VV DR RFH FK+GSCSC D+W
Sbjct: 589 HIFKNLRICQDCHSAIKIASKVYKREIVVRDRYRFHSFKHGSCSCSDYW 637
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 152/399 (38%), Positives = 229/399 (57%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHK-GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE- 58
Y + ++AL L+R + L + T V+++ C L AL+ G +H + N +
Sbjct: 272 YAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDA 331
Query: 59 ---------------------VDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+DV M LKD ++ +I A G ++AL + EM
Sbjct: 332 NLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMD 391
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
++GVKP +TFVG+L ACSH GLV + + +F M + + I+PS+ H+GC++ +LGR GR+
Sbjct: 392 LQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRL 451
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
A+AE ++K+MP+ + LLGAC+ H +L+ RAA Q+++ +P G YV+LSN Y
Sbjct: 452 AEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIY 511
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
+++ +WK V++IR++MA R +KK PG IE+ VVHEFV
Sbjct: 512 AAAGRWKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDSSHPQGEEIYVELGKMV 571
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+VP+ S V D++EEEKE L H+EKLAI +G + ++RI+KNLRVC
Sbjct: 572 EEMKGLGYVPDTSSVFHDLEEEEKEDLLVCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCL 631
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTAT +S++ R+ VV D RFH F+NGSCSC+D+W
Sbjct: 632 DCHTATKFMSRITGRKIVVRDAARFHLFENGSCSCRDYW 670
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 145/383 (37%), Positives = 204/383 (53%), Gaps = 46/383 (12%)
Query: 16 EVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-------- 67
EV+H G+ T LL +G + G +H I+K ++ + AL
Sbjct: 438 EVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCG 497
Query: 68 --------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLV 113
++V+T T++I A G KALE FYEM GVKP+ +T++ VL
Sbjct: 498 NKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLS 557
Query: 114 ACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDH 173
ACSH GL+DE HFN M + I P +EHY C+V +LGR+G + +A E I +MP D
Sbjct: 558 ACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADA 617
Query: 174 FVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELM 233
V LG+CR+H N + E AA+++LE P + +Y++LSN Y+S +W V +R+ M
Sbjct: 618 LVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSM 677
Query: 234 AERNIKKPPGCILIEVDGVVHEF------------------------VKAGFVPNKSEVL 269
++ + K G IEVD VH+F G++PN VL
Sbjct: 678 KQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIKNLGYIPNTDFVL 737
Query: 270 FDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRE 329
D+++E+KE L H+EK+A+ + L+S IR+ KNLRVC DCHTA IS V RE
Sbjct: 738 HDVEDEQKEQYLFQHSEKIAVAYALISTPKPKPIRVFKNLRVCGDCHTAIKYISIVTGRE 797
Query: 330 TVVMDRNRFHHFKNGSCSCKDFW 352
VV D NRFHH K+G CSC D+W
Sbjct: 798 IVVRDANRFHHIKDGKCSCNDYW 820
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 22/131 (16%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
++A+ LF + T DK T+ SLL AC L +G LH ++++ + DV +G L
Sbjct: 230 DDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTL 289
Query: 68 KD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D VM+ TALI Q +A++ F M V P+
Sbjct: 290 VDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNC 349
Query: 106 ITFVGVLVACS 116
TF VL AC+
Sbjct: 350 FTFSSVLKACA 360
>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
Length = 879
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/391 (38%), Positives = 214/391 (54%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG---- 64
EALLLF+++Q G D ++ V+ L AC +L G LH I + +E ++ +
Sbjct: 489 EALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVL 548
Query: 65 ------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
M L DV++ +I A G ++ L +F M G P+ +
Sbjct: 549 NMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDV 608
Query: 107 TFVGVLVACSHAGLVDERISHF-NLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
TFV V+ ACSH GLV + + F +L+ + I P EHY C+V ++ RAG++ AE+ I
Sbjct: 609 TFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIA 668
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
P+ D + +LGA ++H ++E A ++A+ L+EL PD +YV+LSN Y K +
Sbjct: 669 AAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDE 728
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEF------------------------VKAGF 261
+IR LM E+NI+K P I V VHEF KAG+
Sbjct: 729 GAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLEMAKAGY 788
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
P+ + +L D+ +E+K+ L+ H+EKLAI FGL+S PG +RIIKNLRVC DCHTAT
Sbjct: 789 TPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGDCHTATKF 848
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISK+ RE VV D +RFHHF NG+CSC D+W
Sbjct: 849 ISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 95/216 (43%), Gaps = 27/216 (12%)
Query: 3 EDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVG 62
+ S EAL L +Q G+ DK++ V+ L C AL G +H +I++ I+ DV
Sbjct: 381 QHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIVESGIKADVM 440
Query: 63 L----------------------GMALKDVMTLTALIVVLAMCGQ-GNKALEYFYEMQIR 99
L M ++D ++ A+I A + ++AL F +MQ+
Sbjct: 441 LDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLH 500
Query: 100 GVKPDAITFV-GVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G PD I+FV + + A L + ++ H + + G+ ++ ++ + ++G +
Sbjct: 501 GFMPDVISFVAALSACAAQASLAEGKLLHDRI--RETGLESNMTVANAVLNMYAKSGTLV 558
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAER 194
A ++ MP+ D G++ A H + + R
Sbjct: 559 LARKMFGKMPLP-DVISWNGMISAFAQHGHADQVLR 593
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 60/132 (45%), Gaps = 23/132 (17%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACT-HLGALEVGMWLHPYIMKKNIEVD------ 60
E+AL LFR +Q +G+ V++L AC+ LE G +H + +E D
Sbjct: 81 EQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTT 140
Query: 61 ----------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
V G+ K V+ A+I A +A++ FY M + GVK +
Sbjct: 141 LLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAE 200
Query: 105 AITFVGVLVACS 116
ITF+GVL ACS
Sbjct: 201 RITFIGVLDACS 212
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 22/138 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EAL LF+ + +G+ D++ +++L AC+ LE G +H ++ + +
Sbjct: 278 YTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRH 337
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V G AL +DV++ +I Q +AL + MQ+
Sbjct: 338 VNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQL 397
Query: 99 RGVKPDAITFVGVLVACS 116
GVK D I+FV L C+
Sbjct: 398 DGVKADKISFVNALPLCA 415
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 26/191 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWL--------HPYI 52
Y + E+A+ +F + +G+ +++T + +L AC+ L LEV + H ++
Sbjct: 176 YAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHL 235
Query: 53 MKKNIEVDV--------GLGMALK-------DVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ + L A + +++ TA+I + ++ALE F M
Sbjct: 236 HDSSFATALVNFYGSCGDLEQAFRAFSRHRLELILATAMITQYTQRERWDEALELFKVML 295
Query: 98 IRGVKPDAITFVGVLVACSHA-GLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ GVK D I + VL ACS GL + RI H M E R + L+ + G+ G
Sbjct: 296 LEGVKLDRIACMAVLNACSGPRGLEEGRIIH-GFMREIRFDR-HVNAGNALINMYGKCGS 353
Query: 157 IAKAEELIKNM 167
+ +A E+ ++M
Sbjct: 354 LEEAVEVFRSM 364
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 26/52 (50%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACS 116
M ++D +T LI G +AL F MQ+ GV P FV VL ACS
Sbjct: 59 MPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACS 110
>gi|125557337|gb|EAZ02873.1| hypothetical protein OsI_25005 [Oryza sativa Indica Group]
Length = 651
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 219/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ E AL +FR + +G+ ++ +V+ L A LG LE G ++H + + + V
Sbjct: 254 YVKEEELEVALGVFRNMVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVC 313
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL +DV A+I LA G G A+E F
Sbjct: 314 MNVGAALVDMYAKCGCVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFIS 373
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ P +TFVGVL CS +GLV E +F L+ EKY I P +EHYGC+V +LGRAG +
Sbjct: 374 EGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVP 433
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A ELI+ M +A D + G +L +C+ H ++ +L+EL P + G YV+LS Y+
Sbjct: 434 EAIELIEGMHIAPDPVLWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYA 493
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ KW +V+ +R+LM+ R K G L+E G VH+F+
Sbjct: 494 KANKWDEVREVRKLMSSRGTNKSAGWSLMEAHGKVHKFLVGDTYHKDSVQIYDTLDMINK 553
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+VP+ S VL D+ EEEK A+ +H+E+LAI +G + G IRI+KNLRVC D
Sbjct: 554 RLTEAGYVPDVSSVLHDIGEEEKVHAVKVHSERLAIAYGFIVLEAGSPIRIVKNLRVCGD 613
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH + +++ V+ RE +V D +RFHH K G CSC D+W
Sbjct: 614 CHEFSKMVTMVFQREIIVRDGSRFHHMKEGKCSCLDYW 651
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 152/399 (38%), Positives = 229/399 (57%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHK-GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE- 58
Y + ++AL L+R + L + T V+++ C L AL+ G +H + N +
Sbjct: 213 YAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDA 272
Query: 59 ---------------------VDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+DV M LKD ++ +I A G ++AL + EM
Sbjct: 273 NLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMD 332
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
++GVKP +TFVG+L ACSH GLV + + +F M + + I+PS+ H+GC++ +LGR GR+
Sbjct: 333 LQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRL 392
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
A+AE ++K+MP+ + LLGAC+ H +L+ RAA Q+++ +P G YV+LSN Y
Sbjct: 393 AEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIY 452
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
+++ +WK V++IR++MA R +KK PG IE+ VVHEFV
Sbjct: 453 AAAGRWKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDRSHPQGEEIYVELGKMV 512
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+VP+ S V D++EEEKE L H+EKLAI +G + ++RI+KNLRVC
Sbjct: 513 EEMKGLGYVPDTSSVFHDLEEEEKEDLLVCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCL 572
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTAT +S++ R+ VV D RFH F+NGSCSC+D+W
Sbjct: 573 DCHTATKFMSRITGRKIVVRDAARFHLFENGSCSCRDYW 611
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 116/294 (39%), Gaps = 35/294 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLL--LACTHLGALEVGMWLHPYIMKKNIEVDVGLGMA 66
EAL+ FR + G D+VT +L +A A++ G +H Y + +V +G A
Sbjct: 12 EALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTA 71
Query: 67 L----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM--QIRGVK 102
+ K+ +T A++ + G+ +ALE F EM + R +
Sbjct: 72 VISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMCERSRSAR 131
Query: 103 PDAITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAE 161
PD +F + ACS+ L R H L E + + L+ + + G + +A
Sbjct: 132 PDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGDLEEAR 191
Query: 162 ELIKNMPMALDHFVLGGLLGACRIHDNLEAA---ERAAQQLLELLPDNGGSYVILSNRYS 218
++ ++ D ++ A H + A R+ +L P G++V + + +
Sbjct: 192 KVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQ-GTFVTVIDVCA 250
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFDM 272
K+ + I + N L+ + +VH + K G + +V M
Sbjct: 251 ELSALKQGRAIHARVRATNFDAN----LLVSNALVHMYGKCGCLDEALDVFHSM 300
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 147/397 (37%), Positives = 217/397 (54%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK------ 55
+E+ EEA+ +FR++Q G +++T+ S+L AC+ L +G +H Y+ +
Sbjct: 377 MENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDL 436
Query: 56 ----------------NIEVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
N+ +V M KDV+ +I+ AM G G +AL F +M +
Sbjct: 437 TSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLS 496
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
V+P+++TF GVL CSH+ LV+E + FN M + + P HY C+V I RAGR+ +
Sbjct: 497 RVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNE 556
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A + I+ MPM G LL ACR++ N+E A+ +A++L E+ P+N G+YV L N +
Sbjct: 557 AYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVT 616
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
++ W + ++R LM ER I K PGC ++V VH FV
Sbjct: 617 AKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEK 676
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
AG+ P+ VL D+D+EEK +L H+EKLA+ FG+++ IR+ KNLR+C DC
Sbjct: 677 MKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDC 736
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H A +SKV VV D RFHHFKNG+CSCKD W
Sbjct: 737 HNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 773
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 23/162 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ + + +FRE+ G+ + +T+ S+L AC L L+ G +H + ++ + V+
Sbjct: 240 YVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVN 299
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL +DV++ ++ + K F +M
Sbjct: 300 LFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSR 359
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPS 140
GV+ D T+ V+ C G +E + F M +K G +P+
Sbjct: 360 DGVRADEATWNAVIGGCMENGRSEEAVEMFRKM-QKMGFKPN 400
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 24/131 (18%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLG-ALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EA+ ++ +Q +G+ D ++ AC G AL V +H + + DV +G AL
Sbjct: 147 EAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKE-VHDDATRCGVMSDVFVGNAL 205
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+DV++ T+L CG K ++ F EM GVKP+
Sbjct: 206 IHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNP 265
Query: 106 ITFVGVLVACS 116
+T +L AC+
Sbjct: 266 MTVSSILPACA 276
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
D T + LI L G N+A++ + +Q RG+KPD F+ AC+ +G
Sbjct: 128 DPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSG 178
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 219/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ E L L RE+Q + ++ D T+ S++ C LG L++G W+H YI K+ +++D
Sbjct: 143 YSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYIDKEGVKID 202
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL +DV T + +I A+ G KAL+ F M+
Sbjct: 203 VVLGTALVGMYSKCGSLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKALQLFDAMKR 262
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ P+ +TF VL A SH+GLV++ F M +Y I P I+HYGC+V + RAG +
Sbjct: 263 SKIIPNCVTFTSVLSAYSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVG 322
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A + I+ MP+ + + LLGAC+ H E ++++L+L P + +YV +SN Y+
Sbjct: 323 HAHKFIQTMPIEPNVVLWRTLLGACKTHGYKGLGEHISRKILKLDPSSPENYVFVSNVYA 382
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S +W V ++R LM E+ KK G IE++ +VH+F+
Sbjct: 383 SLGRWSSVCQVRSLMKEKAPKKQHGWSSIEINFMVHKFIMGEESHPKREKIYGMLHQMAR 442
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G V + +VL D+DEEEKE AL LH+E+LAI +GL+ G IRI+KNLR C D
Sbjct: 443 KLKQVGHVASTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRACRD 502
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH +IS+VYNRE ++ DR FHHF+ CSC D+W
Sbjct: 503 CHEVIKLISEVYNREIILRDRVCFHHFRERGCSCNDYW 540
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 118/296 (39%), Gaps = 40/296 (13%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL----- 63
A+ L++++ G++ + T +L AC L L G LH I+K ++ + L
Sbjct: 50 SAIALYKDMFLCGISPNSYTFGFVLNACCKLLRLCEGQELHSQIVKAGLDFETPLLNGLI 109
Query: 64 -----------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
M D + + ++ + GQ + L+ EMQ V DA
Sbjct: 110 KLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYSQNGQAVETLKLLREMQAENVSSDAF 169
Query: 107 TFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
T V+ C G++D + H + +K G++ + LV + + G + A ++ +
Sbjct: 170 TLASVVGVCGDLGVLDLGKWVHSYI--DKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQ 227
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAER--AAQQLLELLPDNGGSYVILSNRYSSSRKW 223
M D ++ IH + E A + A + +++P N ++ + + YS S
Sbjct: 228 GMA-ERDVTTWSIMIAGYAIHGHDEKALQLFDAMKRSKIIP-NCVTFTSVLSAYSHSGLV 285
Query: 224 KKVKRIRELMAERNIKKPP----GCILIEVDGVVHEFVKAGFVPNKSEVLFDMDEE 275
+K +I E M P GC+ V F +AG V + + + M E
Sbjct: 286 EKGHQIFETMWTEYKITPQIKHYGCM-------VDLFCRAGMVGHAHKFIQTMPIE 334
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 150/392 (38%), Positives = 222/392 (56%), Gaps = 44/392 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------ 54
+ ++S + AL LF+ ++ G ++ T+ S+L ACT L LE+GM H +I+K
Sbjct: 187 FAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLI 246
Query: 55 -KNIEVD-------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG 100
N VD V M +DV+T + +I LA G +AL+ F M+ G
Sbjct: 247 LNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSG 306
Query: 101 VKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA 160
KP+ IT VGVL ACSHAGL+++ +F M + YGI P EHYGC++ +LG+AG++ A
Sbjct: 307 TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDA 366
Query: 161 EELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSS 220
+L+ M D LLGACR+ N+ AE AA++++ L P++ G+Y +LSN Y++S
Sbjct: 367 VKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTVLSNIYANS 426
Query: 221 RKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA--------------------- 259
+KW V+ IR+ M + IKK PGC IEV+ +H F+
Sbjct: 427 QKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGDESHPQIVEVNKKLNQLIHRL 486
Query: 260 ---GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCH 316
G+VP + VL D++ E+ E +L H+EKLA+ FGL++ +IRI KNLR+C DCH
Sbjct: 487 IGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPSEKVIRIRKNLRICGDCH 546
Query: 317 TATNIISKVYNRETVVMDRNRFHHFKNGSCSC 348
+ SK+ NR V+ D R+HHF++G CSC
Sbjct: 547 VFCKLASKLENRNIVIRDPIRYHHFQDGKCSC 578
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
M ++V++ T +I + C KALE M GV+P+ T+ VL AC+ G+ D R
Sbjct: 74 MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACN--GMSDVR 131
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGA 182
+ H ++ E G+ + L+ + + G A + M D V ++G
Sbjct: 132 MLHCGIIKE--GLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTG-DAIVWNSIIGG 186
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 218/398 (54%), Gaps = 47/398 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V++ + L FR + + + V+ S++ AC HL AL +G LH I++ + +
Sbjct: 304 VQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNE 363
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ +L +D++ TA+I+ AM G A+ F M
Sbjct: 364 FIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLED 423
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
GV+P + F+ VL ACSHAGLVDE +FN M +GI P +EHY + +LGRAGR+ +
Sbjct: 424 GVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEE 483
Query: 160 AEELIKNMP-MALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A + I NM + V LL ACR H ++E AE+ +LL + +N G+YV++SN YS
Sbjct: 484 AYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYS 543
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++++WK R+R M ++ +KK P C IEV VH F+
Sbjct: 544 AAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLE 603
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+V + ++VL D+DEE K L+ H+E+LAI +G++S G IR+IKN+RVC D
Sbjct: 604 QMEKEGYVIDTNQVLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRVIKNIRVCAD 663
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA I+K+ RE V D +RFHHFKNGSCSC D+W
Sbjct: 664 CHTAIKFITKIVGREITVRDNSRFHHFKNGSCSCGDYW 701
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 23/140 (16%)
Query: 1 YVEDSACEEALLLFREVQHKG-LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
+ ++ EAL + RE+ G L D T+ S+L + G +H Y ++ +
Sbjct: 201 FAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDG 260
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
DV +G +L KD ++ ++I G+ ++ L +F M
Sbjct: 261 DVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRML 320
Query: 98 IRGVKPDAITFVGVLVACSH 117
VKP A++F V+ AC+H
Sbjct: 321 KENVKPMAVSFSSVIPACAH 340
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/395 (37%), Positives = 212/395 (53%), Gaps = 50/395 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI-----EVDVG 62
E+AL FR++Q G + + V ++ AC++L + G +H +K +I VD
Sbjct: 325 EDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNA 384
Query: 63 L------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
L MA + ++L ++I A G ++L F M R + P
Sbjct: 385 LIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPT 444
Query: 105 AITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+ITF+ VL AC+H G V+E ++FN+M EK+ I P EHY C++ +LGRAG++++AE LI
Sbjct: 445 SITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLI 504
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWK 224
MP LLGACR H N+E A +AA Q+L+L P N YV+LSN Y+S+ +W+
Sbjct: 505 ARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWE 564
Query: 225 KVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAG 260
+V +R+ M +R +KK PGC IEV +H FV +AG
Sbjct: 565 EVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAG 624
Query: 261 FVPNKSEVLFDMDEE---EKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHT 317
+VP+ L D EKE L H+EKLA+ FGL+S G + ++KNLR+C DCH
Sbjct: 625 YVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHN 684
Query: 318 ATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
A IS + RE V D +RFH FK G CSC D+W
Sbjct: 685 AIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 28/193 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +AL LF+E+ +GL D T+ S+L A T L L G+ H ++K +
Sbjct: 215 YGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQN 274
Query: 61 VGLGMALKDV-----------------MTLTALIVVLAMCGQGNK-------ALEYFYEM 96
+G L D+ +T L++ M ++ ALE F +M
Sbjct: 275 SHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQM 334
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDE--RISHFNLMSEKYGIRPSIEHYGCLVYILGRA 154
Q G +P+ +FV V+ ACS+ + +I L S+ R S+++ L+ + +
Sbjct: 335 QGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDN--ALIAMYSKC 392
Query: 155 GRIAKAEELIKNM 167
G + A L M
Sbjct: 393 GNLQDARRLFDRM 405
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 21/135 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACT-------HLGALEVGMWLHPYI- 52
Y + AL LF ++ GL D T+ +++ AC L ++ V Y+
Sbjct: 115 YADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVS 174
Query: 53 --------MKKNIEVD----VGLGMA-LKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
KN ++D V GM ++D ++ ++IV +G+KAL F EM R
Sbjct: 175 VNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRR 234
Query: 100 GVKPDAITFVGVLVA 114
G+ D T VL A
Sbjct: 235 GLNVDMFTLASVLTA 249
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/395 (37%), Positives = 212/395 (53%), Gaps = 50/395 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI-----EVDVG 62
E+AL FR++Q G + + V ++ AC++L + G +H +K +I VD
Sbjct: 325 EDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNA 384
Query: 63 L------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
L MA + ++L ++I A G ++L F M R + P
Sbjct: 385 LIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPT 444
Query: 105 AITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+ITF+ VL AC+H G V+E ++FN+M EK+ I P EHY C++ +LGRAG++++AE LI
Sbjct: 445 SITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLI 504
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWK 224
MP LLGACR H N+E A +AA Q+L+L P N YV+LSN Y+S+ +W+
Sbjct: 505 ARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWE 564
Query: 225 KVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAG 260
+V +R+ M +R +KK PGC IEV +H FV +AG
Sbjct: 565 EVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAG 624
Query: 261 FVPNKSEVLFDMDEE---EKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHT 317
+VP+ L D EKE L H+EKLA+ FGL+S G + ++KNLR+C DCH
Sbjct: 625 YVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHN 684
Query: 318 ATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
A IS + RE V D +RFH FK G CSC D+W
Sbjct: 685 AIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 28/193 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +AL LF+E+ +GL D T+ S+L A T L L G+ H ++K +
Sbjct: 215 YGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQN 274
Query: 61 VGLGMALKDV-----------------MTLTALIVVLAMCGQGNK-------ALEYFYEM 96
+G L D+ +T L++ M ++ ALE F +M
Sbjct: 275 SHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQM 334
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDE--RISHFNLMSEKYGIRPSIEHYGCLVYILGRA 154
Q G +P+ +FV V+ ACS+ + +I L S+ R S+++ L+ + +
Sbjct: 335 QGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDN--ALIAMYSKC 392
Query: 155 GRIAKAEELIKNM 167
G + A L M
Sbjct: 393 GNLQDARRLFDRM 405
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 21/135 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACT-------HLGALEVGMWLHPYI- 52
Y + AL LF ++ GL D T+ +++ AC L ++ V Y+
Sbjct: 115 YADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVS 174
Query: 53 --------MKKNIEVD----VGLGMA-LKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
KN ++D V GM ++D ++ ++IV +G+KAL F EM R
Sbjct: 175 VNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRR 234
Query: 100 GVKPDAITFVGVLVA 114
G+ D T VL A
Sbjct: 235 GLNVDMFTLASVLTA 249
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/400 (37%), Positives = 225/400 (56%), Gaps = 50/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV ++ ++AL +F ++ G ++ T L AC L AL+ G +H +K +E D
Sbjct: 278 YVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETD 337
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G +L KD+++ ++IV A G G AL +F +M
Sbjct: 338 VFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIR 397
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYG--IRPSIEHYGCLVYILGRAGR 156
RGV P+ ITF G+L ACS +G++ + F +S +RP +HY C+V ILGR G+
Sbjct: 398 RGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRP--QHYACMVDILGRCGK 455
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ +AEEL++ MP+ + + LL ACR+H NLE AERAA+ +L+L P+ +YV+LSN
Sbjct: 456 LDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNI 515
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA----------------- 259
Y+S+ +W V R+R M + + K PG + + G HEF+ A
Sbjct: 516 YASAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKLDWL 575
Query: 260 -------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
G+VP++ L D+++E+KE L+ H+E+LAI FGLVS + G I ++KNLRVC
Sbjct: 576 GKKLKEFGYVPDQKFALHDVEDEQKEEMLSFHSERLAIAFGLVSTVEGSTITVMKNLRVC 635
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+ ++SK+ R+ VV D RFHHFKNG CSC D+W
Sbjct: 636 GDCHSVIKLMSKIVGRKIVVRDSGRFHHFKNGICSCSDYW 675
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 43 EVGMW---LHPYIMKKNIEVDVGL--GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+V W +H Y +E V L M ++DV++ T++I L + G+ +AL F +M
Sbjct: 135 DVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKML 194
Query: 98 IRGVKPDAITFVGVLVACSHA 118
GV+P TF VL AC++A
Sbjct: 195 RSGVEPTWSTFACVLSACANA 215
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 72/182 (39%), Gaps = 23/182 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEAL +F+++ G+ T +L AC + +G+ +H +++K + ++L
Sbjct: 184 EEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSL 243
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
K+V+ TAL+ + AL F +M G P+
Sbjct: 244 ITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQ 303
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
TF L AC +D+ + M+ K G+ + LV + G + A + +
Sbjct: 304 STFSITLKACCGLEALDKG-KEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFR 362
Query: 166 NM 167
N+
Sbjct: 363 NI 364
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/397 (37%), Positives = 217/397 (54%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK------ 55
+E+ EEA+ +FR++Q G +++T+ S+L AC+ L +G +H Y+ +
Sbjct: 291 MENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDL 350
Query: 56 ----------------NIEVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
N+ +V M KDV+ +I+ AM G G +AL F +M +
Sbjct: 351 TSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLS 410
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
V+P+++TF GVL CSH+ LV+E + FN M + + P HY C+V I RAGR+ +
Sbjct: 411 RVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNE 470
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A + I+ MPM G LL ACR++ N+E A+ +A++L E+ P+N G+YV L N +
Sbjct: 471 AYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVT 530
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
++ W + ++R LM ER I K PGC ++V VH FV
Sbjct: 531 AKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEK 590
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
AG+ P+ VL D+D+EEK +L H+EKLA+ FG+++ IR+ KNLR+C DC
Sbjct: 591 MKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDC 650
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H A +SKV VV D RFHHFKNG+CSCKD W
Sbjct: 651 HNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 687
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 23/162 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ + + +FRE+ G+ + +T+ S+L AC L L+ G +H + ++ + V+
Sbjct: 154 YVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVN 213
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL +DV++ ++ + K F +M
Sbjct: 214 LFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSR 273
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPS 140
GV+ D T+ V+ C G +E + F M +K G +P+
Sbjct: 274 DGVRADEATWNAVIGGCMENGRSEEAVEMFRKM-QKMGFKPN 314
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 24/131 (18%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLG-ALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EA+ ++ +Q +G+ D ++ AC G AL V +H + + DV +G AL
Sbjct: 61 EAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKE-VHDDATRCGVMSDVFVGNAL 119
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+DV++ T+L CG K ++ F EM GVKP+
Sbjct: 120 IHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNP 179
Query: 106 ITFVGVLVACS 116
+T +L AC+
Sbjct: 180 MTVSSILPACA 190
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
D T + LI L G N+A++ + +Q RG+KPD F+ AC+ +G
Sbjct: 42 DPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSG 92
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/376 (38%), Positives = 205/376 (54%), Gaps = 48/376 (12%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKD--------------- 69
+ +T+++LL C L A G +H Y ++ +E D+ +G AL D
Sbjct: 503 NNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVF 562
Query: 70 -------VMTLTALIVVLAMCGQGNKALEYFYEMQIRG-VKPDAITFVGVLVACSHAGLV 121
V+T LI+ M G G++A+ F EM G P+ +TF+ L ACSH+GLV
Sbjct: 563 DRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLV 622
Query: 122 DERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM-PMALDHFVLGGLL 180
D + F+ M +G++P+ + + C+V +LGRAGR+ +A +I +M P LL
Sbjct: 623 DRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLL 682
Query: 181 GACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKK 240
GACR+H N+E E AA++L EL P YV+L N YS++ W K +R M + + K
Sbjct: 683 GACRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAK 742
Query: 241 PPGCILIEVDGVVHEFV------------------------KAGFVPNKSEVLFDMDEEE 276
PGC IE+DG +H F+ + G+ P+ S VL D+DE+E
Sbjct: 743 EPGCSWIELDGAIHRFMAGESSHPASAEVHAHMDALWERMRREGYAPDTSCVLHDVDEDE 802
Query: 277 KETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRN 336
K L H+EKLAI FGL+ PG IR+ KNLRVCNDCH A +SK+ R+ V+ D
Sbjct: 803 KAAMLRYHSEKLAIAFGLLRAPPGAAIRVAKNLRVCNDCHEAAKFMSKMVGRDIVLRDVR 862
Query: 337 RFHHFKNGSCSCKDFW 352
RFHHF++GSCSC D+W
Sbjct: 863 RFHHFRDGSCSCGDYW 878
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 37/145 (25%)
Query: 8 EEALLLFREVQHKGLTG-DKVTMVSLLLACTHL---GALEVGMWLHPYIMKKNIEVDVG- 62
E AL R++ +G T+VS+LLAC+HL +G H + +K+ +D G
Sbjct: 150 ERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGF-LDEGR 208
Query: 63 --------LGMALK-----------------------DVMTLTALIVVLAMCGQGNKALE 91
L M + DV+T +I +L G+ +A+E
Sbjct: 209 ERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVE 268
Query: 92 YFYEMQIRGVKPDAITFVGVLVACS 116
Y+M GV+PD +TF L ACS
Sbjct: 269 VLYDMVSLGVRPDGVTFASALPACS 293
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/398 (38%), Positives = 213/398 (53%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ + L L E+ GL + T+V+ + A AL G LH ++ E
Sbjct: 252 YSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESH 311
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL D V++ A+I AM G +AL+ F EM
Sbjct: 312 DKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMN- 370
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
R KPD ITFVGVL ACSH GL++E F M Y I P+++HY C+V +LG +GR+
Sbjct: 371 RVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLD 430
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A LI M + D V G LL +C+IH N+E E A ++L+EL PD+ G+YVILSN Y+
Sbjct: 431 EAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYA 490
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ KW+ V ++R+LM +R +KK C IEV VH F+
Sbjct: 491 QAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGG 550
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+ P+ V D++++EK + H+E+LAI FGL+S PG + I KNLR+C D
Sbjct: 551 LMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICED 610
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ISK+ RE V D NR+HHFK+G CSC D+W
Sbjct: 611 CHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 648
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + E A+ L+ ++ GL D T +L AC L A+E G +H ++++ E D
Sbjct: 151 YAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKD 210
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
V +G AL D+ A CG A E F ++ +R DA+ + +L A S G
Sbjct: 211 VFVGAALIDMY---------AKCGCVGSAREVFDKILVR----DAVLWNSMLAAYSQNGH 257
Query: 121 VDERISHFNLMSEK--YGIRPS 140
D +S L SE G+RP+
Sbjct: 258 PDACLS---LCSEMVLTGLRPT 276
>gi|293334801|ref|NP_001169361.1| uncharacterized protein LOC100383228 [Zea mays]
gi|224028917|gb|ACN33534.1| unknown [Zea mays]
Length = 596
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/387 (38%), Positives = 218/387 (56%), Gaps = 54/387 (13%)
Query: 14 FREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKD---- 69
FRE+ + + VT+V+ L AC LG L+ G+ +H + +V +G AL D
Sbjct: 216 FRELPPRE-EPNAVTVVAALSACAQLGTLKDGLAVHEFARTIGAVDNVCVGNALIDMYSK 274
Query: 70 --------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFV 109
+++ A I L++ G G AL+ F EM R ++PD IT++
Sbjct: 275 CGSLSRALEVFHSIKLEDRTLVSYNATIQALSIHGHGEDALKLFDEMPAR-IEPDEITYL 333
Query: 110 GVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPM 169
V+ C+HAGLVD+ F+ M + P+++HYG +V +LGRAGR+A+A ++I +MP
Sbjct: 334 AVMGGCNHAGLVDDGRRVFDSMR----VPPNMKHYGTIVDLLGRAGRLAEAYDMIMSMPF 389
Query: 170 ALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRI 229
D + LLGA ++H N++ AE AA +L +L + G YV+LSN Y+S +W V R+
Sbjct: 390 PADIVLWQTLLGAAKMHGNVDLAELAATKLADLGSNVDGDYVLLSNVYASKSRWVDVGRV 449
Query: 230 RELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GFVPNK 265
R+ M ++KK PG E+DGV+H+F+ G+ P
Sbjct: 450 RDTMRSNDVKKVPGFSYTEIDGVMHKFINGDKEHMRWREIYRALDEIGSRICALGYEPET 509
Query: 266 SEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKV 325
S VL D+ EEEK+ AL+ H+EKLAI FGL+S PG IR+IKNLR C DCH +ISK
Sbjct: 510 SNVLHDIGEEEKQYALSYHSEKLAIAFGLISTPPGETIRVIKNLRTCGDCHVVAKLISKA 569
Query: 326 YNRETVVMDRNRFHHFKNGSCSCKDFW 352
YNR ++ DR RFH F++G CSC+D+W
Sbjct: 570 YNRVIIIRDRARFHRFEDGHCSCRDYW 596
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/398 (35%), Positives = 218/398 (54%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++A LF + + + T S+L AC +G+LE G W+H ++K ++
Sbjct: 194 YARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLV 253
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G +A +DV++ +++ + G G AL+ F EM
Sbjct: 254 AFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLR 313
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ P+ ITF+ VL ACSHAGL+DE +F++M +KY + P I HY +V +LGRAG +
Sbjct: 314 TRIAPNDITFLCVLTACSHAGLLDEGRHYFDMM-KKYNVEPQISHYVTMVDLLGRAGHLD 372
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I MP+ V G LLGACR+H N+E AA+ + EL G++V+L N Y+
Sbjct: 373 RAIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYA 432
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ +W ++R++M E +KK P C +E++ VH FV
Sbjct: 433 LAGRWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISD 492
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G+VP+ S VL MD++E+E L H+EKLA+ F L++ PG IRI KN+R+C D
Sbjct: 493 KIKEIGYVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGD 552
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A +SK+ RE +V D NRFHHF +G+CSC+D+W
Sbjct: 553 CHSAFKFVSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 24/147 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEV--GMWLHPYIMKKNIE 58
Y + ++ALLL E+ GL ++ T+ SLL A + +G+ +V G LH ++ +
Sbjct: 91 YSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYD 150
Query: 59 VDVGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEM 96
+V + A+ D+ ++ ALI A GQG+KA F M
Sbjct: 151 SNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNM 210
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDE 123
VKP T+ VL AC+ G +++
Sbjct: 211 LRENVKPTHFTYSSVLCACASMGSLEQ 237
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 49/127 (38%), Gaps = 22/127 (17%)
Query: 18 QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG------------- 64
Q K G + +LL CTHL L G +H ++ D+ +
Sbjct: 7 QCKNNAGAREICHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDL 66
Query: 65 ---------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC 115
M+ +DV+T TALI + + AL EM G+KP+ T +L A
Sbjct: 67 VYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAA 126
Query: 116 SHAGLVD 122
S G D
Sbjct: 127 SGVGSTD 133
>gi|195609728|gb|ACG26694.1| pentatricopeptide repeat protein PPR986-12 [Zea mays]
Length = 551
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/404 (39%), Positives = 227/404 (56%), Gaps = 62/404 (15%)
Query: 10 ALLLFREVQHK--GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK--------NIEV 59
AL LFRE+Q L D T+ S+L AC GAL +G++ H ++++ +
Sbjct: 149 ALDLFREMQRDRPDLAPDAYTVQSVLGACAATGALSLGLYAHALLLRELGGAGHASPVSR 208
Query: 60 DVGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEM- 96
DV + M+ +D+ + A+++ LA G+ +L+ F M
Sbjct: 209 DVLINNSLVDLYGKCGAVELARQVFDRMSERDLASWNAMVLALANHGRVQDSLDLFDRMT 268
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
++ G+ P+AITFV VL AC+H GLVDE +F M +GIRP IEHYGC+V IL RAG
Sbjct: 269 RVEGLVPNAITFVAVLSACNHGGLVDEGRRYFAAMVSDHGIRPRIEHYGCMVDILARAGF 328
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGAC-RIHDNLEAAERAAQQLLELLPDNG--GSYVIL 213
I +A +++ M D + LL AC + + LE +E A+ L++ PD+ G YV+L
Sbjct: 329 IEEALDVVAGMNCRPDSIIWRSLLDACCKRNAGLELSEAMAKLALDV-PDDAVSGVYVLL 387
Query: 214 SNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------- 257
S Y+S+++W V IR+LM++ KK PG IE+DG VH+FV
Sbjct: 388 SRVYASAQRWNDVGMIRQLMSQEGFKKEPGFSSIEMDGSVHQFVAGDTSHPQSEEIYVKL 447
Query: 258 --------KAGFVPNKSEVLFDMD-EEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKN 308
AG+ P+ SE D + K L LH+E+LAI+FGL++ PG IRI+KN
Sbjct: 448 DEIQQRLTSAGYKPDLSEAPMVADIDRTKGATLRLHSERLAISFGLLNATPGAPIRILKN 507
Query: 309 LRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
LRVC DCHT + +ISK+YN E +V DR RFHHFK+GSCSCKD+W
Sbjct: 508 LRVCKDCHTISKLISKLYNVEIIVRDRIRFHHFKDGSCSCKDYW 551
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 217/398 (54%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ ++ +EAL LFR +Q G+ D +VS LLAC+++G L++G +H +I+++ + +
Sbjct: 285 FAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFN 343
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG A +D++ A+I G+G AL F EM
Sbjct: 344 CILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNE 403
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD TF +L A SH+GLV+E F M + I P+ +HY CLV +L R+G +
Sbjct: 404 TGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARSGLVE 463
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +L+ +M + LL C + LE E A +LEL PD+ G ++SN Y+
Sbjct: 464 EASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYA 523
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+++KW KV+++R+LM + KK PGC IE+ G H F+
Sbjct: 524 ATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHAFLMEDQSHPQREEIVSKVAKLDL 583
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G++P V D++EE KE L+ H+EKLAI FGL++ PG + IIKNLRVC D
Sbjct: 584 EMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSEKLAIAFGLLNTGPGTRLVIIKNLRVCGD 643
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ISK+ +RE VV D RFHHFK+G CSC+D+W
Sbjct: 644 CHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 104/230 (45%), Gaps = 27/230 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
+A+ ++R ++ G+ GD+V M+ ++ ACT + +G +H ++++ + +DV +L
Sbjct: 192 DAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLV 251
Query: 69 DV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
D+ ++ +A+I A GQ ++AL F MQ G++PD+
Sbjct: 252 DMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSG 311
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
V L+ACS+ G + S + ++ + +Y + G +A A+ L N
Sbjct: 312 ALVSALLACSNIGFLKLGRSVHGFIVRRFDFNCILGTAAIDMY--SKCGSLASAQMLF-N 368
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE--LLPDNGGSYVILS 214
M D + ++ C H + A Q++ E + PD+ +LS
Sbjct: 369 MISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLS 418
>gi|413952609|gb|AFW85258.1| hypothetical protein ZEAMMB73_606432 [Zea mays]
gi|413952610|gb|AFW85259.1| hypothetical protein ZEAMMB73_606432 [Zea mays]
gi|413952611|gb|AFW85260.1| hypothetical protein ZEAMMB73_606432 [Zea mays]
Length = 630
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/387 (38%), Positives = 218/387 (56%), Gaps = 54/387 (13%)
Query: 14 FREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKD---- 69
FRE+ + + VT+V+ L AC LG L+ G+ +H + +V +G AL D
Sbjct: 250 FRELPPRE-EPNAVTVVAALSACAQLGTLKDGLAVHEFARTIGAVDNVCVGNALIDMYSK 308
Query: 70 --------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFV 109
+++ A I L++ G G AL+ F EM R ++PD IT++
Sbjct: 309 CGSLSRALEVFHSIKLEDRTLVSYNATIQALSIHGHGEDALKLFDEMPAR-IEPDEITYL 367
Query: 110 GVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPM 169
V+ C+HAGLVD+ F+ M + P+++HYG +V +LGRAGR+A+A ++I +MP
Sbjct: 368 AVMGGCNHAGLVDDGRRVFDSMR----VPPNMKHYGTIVDLLGRAGRLAEAYDMIMSMPF 423
Query: 170 ALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRI 229
D + LLGA ++H N++ AE AA +L +L + G YV+LSN Y+S +W V R+
Sbjct: 424 PADIVLWQTLLGAAKMHGNVDLAELAATKLADLGSNVDGDYVLLSNVYASKSRWVDVGRV 483
Query: 230 RELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GFVPNK 265
R+ M ++KK PG E+DGV+H+F+ G+ P
Sbjct: 484 RDTMRSNDVKKVPGFSYTEIDGVMHKFINGDKEHMRWREIYRALDEIGSRICALGYEPET 543
Query: 266 SEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKV 325
S VL D+ EEEK+ AL+ H+EKLAI FGL+S PG IR+IKNLR C DCH +ISK
Sbjct: 544 SNVLHDIGEEEKQYALSYHSEKLAIAFGLISTPPGETIRVIKNLRTCGDCHVVAKLISKA 603
Query: 326 YNRETVVMDRNRFHHFKNGSCSCKDFW 352
YNR ++ DR RFH F++G CSC+D+W
Sbjct: 604 YNRVIIIRDRARFHRFEDGHCSCRDYW 630
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/392 (37%), Positives = 216/392 (55%), Gaps = 40/392 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ + L LF +++ G+ D T+VS+L +C HLGA ++G + + +
Sbjct: 229 YSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPN 288
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V L AL K +++ TA+I M G G L F +M
Sbjct: 289 VFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIK 348
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
RG++PD FV VL ACSH+GL D+ + F M +Y + P EHY CLV +LGRAGR+
Sbjct: 349 RGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLD 408
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E I +MP+ D V G LLGAC+IH N++ AE A +++E P N G YV++SN YS
Sbjct: 409 EAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYS 468
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFDMDEEEKE 278
S+ + + RIR +M ER +K PG +E G VH F+ ++E + M +E +
Sbjct: 469 DSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGKVHLFLAGDRSHEQTEEVHRMLDELET 528
Query: 279 TALNL------------------HTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATN 320
+ + L H+E+LAI FG+++ +PG I +IKNLRVC DCH
Sbjct: 529 SVMELAGNMDCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFIK 588
Query: 321 IISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
++SK+ +R VV D +RFH+FK+G CSCKD+W
Sbjct: 589 LVSKIVDRRFVVRDASRFHYFKDGVCSCKDYW 620
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 27/193 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y +S +A +FR ++ G++ D VT++ L+ CT L +G LH +K +
Sbjct: 128 YTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSE 187
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + M +K ++T A+I + G LE F +M+
Sbjct: 188 VAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKS 247
Query: 99 RGVKPDAITFVGVLVACSHAGL--VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
GV PD T V VL +C+H G + + + + E G P++ L+ + R G
Sbjct: 248 SGVCPDPFTLVSVLSSCAHLGAKKIGQEVGE---LVEANGFAPNVFLSNALISMYARCGN 304
Query: 157 IAKAEELIKNMPM 169
+AKA + MP+
Sbjct: 305 LAKARAVFDIMPV 317
>gi|302781642|ref|XP_002972595.1| hypothetical protein SELMODRAFT_97496 [Selaginella moellendorffii]
gi|300160062|gb|EFJ26681.1| hypothetical protein SELMODRAFT_97496 [Selaginella moellendorffii]
Length = 606
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 206/391 (52%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGL-TGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
AL L R + G +T +L+ AC +L A+ G LH I+ + +DV L AL
Sbjct: 216 SALELLRVMDQDGFRITSALTFATLVDACGNLSAIAQGRHLHDRIITSGVCIDVVLHTAL 275
Query: 68 KDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
++ +T ++++V A G AL+ F+ M+ G KPD+
Sbjct: 276 LNMYAKCGRVDEARELFDQTLEPNNITFSSMVVAYARNGHFGDALKLFWSMEQDGYKPDS 335
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TF VL ACSH G VD+ +F + GI EH+GC V +L RAG +A AE+ +
Sbjct: 336 VTFTHVLYACSHGGFVDQAWHYFTTLEPDRGIPLVAEHFGCAVDLLARAGWLADAEKFLN 395
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP+ D LL ACRIH N+E RAA+ + L P G Y +LSN YS + KW
Sbjct: 396 RMPIPPDSVSWMSLLQACRIHRNVEIGARAAEHVFRLAPHRAGPYSLLSNIYSDAGKWDM 455
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
++++LM +R IKKP G IE++G EF+ + G+
Sbjct: 456 AAKVQKLMRDRGIKKPGGRSWIEINGKTSEFIVGDSWHPDLVQICQEIQRVSKVMKEHGY 515
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ +VL D +EEEKE L H+EKLAI GL+ P I I+KN+RVC DCHTA +
Sbjct: 516 VPDTKQVLHDAEEEEKEDILYFHSEKLAIGLGLIKTPPKTTISIVKNIRVCPDCHTAAKV 575
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISKV R+ V+ D N FHH ++G CSC+D+W
Sbjct: 576 ISKVTERKIVIRDINLFHHMEDGKCSCRDYW 606
>gi|224143723|ref|XP_002325053.1| predicted protein [Populus trichocarpa]
gi|222866487|gb|EEF03618.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/382 (39%), Positives = 215/382 (56%), Gaps = 54/382 (14%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKK--------------------------NIE 58
D T+ S++ AC L AL +GMW H ++++ +I
Sbjct: 226 DGYTIQSVINACAGLCALSLGMWAHAFLLRNCGVSVARDHVLVNNSLLDMYCKCGSLDIA 285
Query: 59 VDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM-QIRGVKPDAITFVGVLVACSH 117
+ GM DV + ++I+ AM G+G ALE F M +I P++ITFVGVL AC+H
Sbjct: 286 TQIFEGMQKHDVTSWNSMILGFAMHGKGELALECFERMIRISRFVPNSITFVGVLSACNH 345
Query: 118 AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLG 177
+V+E +F++M +Y I P +EHYGCLV IL RAG I +A EL+ +MPM D +
Sbjct: 346 RYMVNEGRKYFDMMVNEYKIEPQLEHYGCLVDILARAGLIDEALELVASMPMKPDVVIWR 405
Query: 178 GLLGAC-RIHDNLEAAERAAQQLLELL-PDNGGSYVILSNRYSSSRKWKKVKRIRELMAE 235
LL +C + + ++E +E A+Q+LE D+ G YV+LS Y+S+ +W V +R+LM
Sbjct: 406 SLLDSCCKKNASVELSENIARQILESEEADSSGVYVLLSRVYASASRWNDVGLVRKLMTN 465
Query: 236 RNIKKPPGCILIEVDGVVHEFV------------------------KAGFVPNKSEV-LF 270
I K PGC LIEVDGV HEF G+ P+ S+ +
Sbjct: 466 NGILKEPGCSLIEVDGVTHEFFAGDTSHPQTKEIYQVLNVVEERIDSTGYKPDYSQAPMV 525
Query: 271 DMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRET 330
D K +L LH+E+LAI GL++ PG+ IRI KNLRVC+DCH T +IS+++N E
Sbjct: 526 DELNTSKRDSLRLHSERLAIALGLLNLKPGMPIRIFKNLRVCDDCHKVTGLISEIFNVEI 585
Query: 331 VVMDRNRFHHFKNGSCSCKDFW 352
+V DR RFHHFK+GSCSC D+W
Sbjct: 586 IVRDRVRFHHFKDGSCSCMDYW 607
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 219/390 (56%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL LFRE+Q G+ ++VT+ S+L AC ++ AL G H + ++ ++ DV +G AL
Sbjct: 371 EALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALI 430
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
K+++ +L+ +M G+ + + F + +KPD I
Sbjct: 431 DMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFI 490
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
+F +L AC GL DE +FN+MSE+YGI+P +EHY C+V +LGRAG++ +A +LIK
Sbjct: 491 SFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKE 550
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
+P D V G LL +CR+ +N++ AE AAQ+L L P+N G+YV++SN Y++ W +V
Sbjct: 551 IPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEV 610
Query: 227 KRIRELMAERNIKKPPGCILIEV------------------------DGVVHEFVKAGFV 262
IR M +KK PGC I+V D + E K+G
Sbjct: 611 DSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQITEKMDEISEEMRKSGHR 670
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
PN L D++E+E+E L H+EKLA+ FGL++ G +++IKNLR+C DCH I
Sbjct: 671 PNLDFALQDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFI 730
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S RE + D NRFHHFK+G CSC DFW
Sbjct: 731 SSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 18/165 (10%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+EA+++F+++ H G D+VT+ S+L + L +G +H Y++K+ + L
Sbjct: 234 KEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGL---------L 284
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYF--YEMQIRGVKPDAITFVGVLVACSHAGLVDERI 125
KD ++A++ + G ++ F +EM GV IT S GLVD+ +
Sbjct: 285 KDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYIT------GLSRNGLVDKAL 338
Query: 126 SHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMA 170
F L E+ + ++ + ++ + G+ +A EL + M +A
Sbjct: 339 EMFGLFKEQ-KMELNVVSWTSIIAGCAQNGKDIEALELFREMQVA 382
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSH-AGLVDERISH 127
+V++ T++I A G+ +ALE F EMQ+ GVKP+ +T +L AC + A L R +H
Sbjct: 352 NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTH 411
Query: 128 FNLMSEKYGIRPSI---EHYG-CLVYILGRAGRIAKAEELIKNMP 168
+ +R + H G L+ + + GRI ++ + MP
Sbjct: 412 ------GFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMP 450
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 60/146 (41%), Gaps = 22/146 (15%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG--- 64
+++ +F + GL D + +L C L A + G +H +++D +
Sbjct: 98 SQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSL 157
Query: 65 -------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
M+ KDV+T +AL+ A G + + EM+ G++P+
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNI 217
Query: 106 ITFVGVLVACSHAGLVDERISHFNLM 131
+++ G+L + +G E + F M
Sbjct: 218 VSWNGILSGFNRSGYHKEAVIMFQKM 243
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 213/398 (53%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EEAL F E+Q ++ + L C+++ ALE+G LH ++K +
Sbjct: 155 YSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTG 214
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL KDV++ +I A G G +AL F M+
Sbjct: 215 WYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKT 274
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD T V VL ACSHAGLVD+ +F M+ YGI + HY C+V +LGRAG++
Sbjct: 275 TGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLE 334
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A+ L+KNMP D G LLGA RIH N E E+AAQ + E+ P N G Y++LS Y+
Sbjct: 335 EAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYA 394
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
+S +W ++R M + +KK PG +EV +H F
Sbjct: 395 ASGRWSDAGKMRLEMRNKGVKKVPGYSWLEVQNKIHTFKVGDTSHPHTDKIYTFLEEMDL 454
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G++ + + V D++EEEK L H+EKLA+ +G++ G IR+IKNLRVC D
Sbjct: 455 KLKQEGYISSTNLVFHDVEEEEKVHMLKYHSEKLAVAYGILYIPAGRPIRVIKNLRVCED 514
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ISK+ R ++ D +RFH+F+ GSCSC+DFW
Sbjct: 515 CHNAIKYISKIVGRLIILRDNHRFHYFEGGSCSCRDFW 552
>gi|326528959|dbj|BAJ97501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 514
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 148/393 (37%), Positives = 209/393 (53%), Gaps = 48/393 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLH---------PYIMKKNIE 58
+ AL ++R++ G+ D+ + + L +C ALE+G +H P++ N
Sbjct: 122 DSALQVYRDMVAAGVGPDEFAVAAALSSCAGATALELGRSVHAAAVRLALDPFLSVGNSL 181
Query: 59 VDV-----GLGMALK----------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
V + LG A K D +T TALIV A G+G ++LE + +M G +P
Sbjct: 182 VSMYAKTGSLGEAKKVFDATRVDRCDPITWTALIVGYAQNGRGRESLEIYADMVRSGCRP 241
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
D +TF+G+L ACSHAGLVD +HF M ++GI P +HY C+V +LGRAGR+ +A +L
Sbjct: 242 DYVTFIGLLFACSHAGLVDAGRAHFRSMQAEHGIAPGADHYACMVDLLGRAGRLDEAMDL 301
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
+ LD V LL ACR H N E AE AA + L P + YV+LSN YS + +W
Sbjct: 302 LNRSTTRLDATVWKALLAACRTHRNAELAEHAAAMVWRLDPTDAVPYVMLSNLYSRAGRW 361
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KA 259
V R+R M R I K PGC + +GV H F
Sbjct: 362 GDVARVRTSMKARGITKEPGCSWVAANGVTHLFYVEDRRHPRAAEVYRKVEEMTERIRGQ 421
Query: 260 GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
G+V + + L D E +E L H+E+LA+ FGL++ G IR+ KNLRVC DCH A
Sbjct: 422 GYVADTAWALQDEGPEGREKGLAHHSERLAVAFGLLAVPAGAPIRVFKNLRVCGDCHAAI 481
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
++++ Y RE V+ D N FHH K+G+CSC D+W
Sbjct: 482 KMVAQAYGREIVLRDSNCFHHMKDGACSCGDYW 514
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 73/177 (41%), Gaps = 21/177 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACT---------HLGALEVGMWLHPYIMKKNIE 58
+ AL L E++ +G D+ T+ L + H L G+ H ++ ++
Sbjct: 23 QRALALLHEMRARGHRADEYTLPPALNSAALLRLPADALHSLLLRAGLAAHLHVANALVD 82
Query: 59 VDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
L M +DV++ T+L+ LA + AL+ + +M GV PD
Sbjct: 83 AYAKLSRHGAARAVFDEMPRRDVVSWTSLLTGLARSRSHDSALQVYRDMVAAGVGPDEFA 142
Query: 108 FVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
L +C+ A ++ S + + + + P + LV + + G + +A+++
Sbjct: 143 VAAALSSCAGATALELGRS-VHAAAVRLALDPFLSVGNSLVSMYAKTGSLGEAKKVF 198
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 145/398 (36%), Positives = 216/398 (54%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + EEAL +F ++ G + T VS + A +L ++ G +H ++K +
Sbjct: 522 FAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSE 581
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL ++ ++ +I + G+G +AL+ F +M+
Sbjct: 582 TEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQ 641
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+G+KP +TFVGVL ACSH GLV+E + +F MS ++GI P +HY C+V ILGRAG++
Sbjct: 642 QGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLD 701
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A+ ++ MP+ D V LL AC++H NLE E AA+ LLEL P + SYV+LSN Y+
Sbjct: 702 RAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYA 761
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ KW +IR++M +R ++K PG IEV VVH F
Sbjct: 762 VTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLND 821
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+ + + ++E K+ +H+EKLA+ FGL+S + +R+IKNLRVCND
Sbjct: 822 RLYKIGYKQENYHLFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCMPLRVIKNLRVCND 881
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHT S V RE V+ D RFHHF NGSCSC D+W
Sbjct: 882 CHTWMKFTSGVMGREIVLRDVYRFHHFNNGSCSCGDYW 919
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 22/141 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EEA+ L+RE+ G+ + S+L ACT ++G +H + K+ +
Sbjct: 118 YAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSE 177
Query: 61 VGLGMALK----------------------DVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL D +T LI A CG G++AL F EMQ+
Sbjct: 178 TFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQL 237
Query: 99 RGVKPDAITFVGVLVACSHAG 119
G+ PD++T +L ACS G
Sbjct: 238 SGLSPDSVTIASLLAACSAVG 258
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 27/181 (14%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+ AL +F E+Q GL+ D VT+ SLL AC+ +G L G LH Y++K + +D + +L
Sbjct: 226 DRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSL 285
Query: 68 KDVMTLTALI-------------------VVLAMCGQGN---KALEYFYEMQIRGVKPDA 105
D+ + I ++L GQ + K+ + FY M GV+P+
Sbjct: 286 LDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNK 345
Query: 106 ITFVGVLVACSHAGLV--DERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
T+ +L C+H G + E+I + K G + + G L+ + + G + KA+ +
Sbjct: 346 FTYPCMLRTCTHTGEIGLGEQIHSLTI---KNGFQSDMYVSGVLIDMYSKYGWLDKAQRI 402
Query: 164 I 164
+
Sbjct: 403 L 403
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 25/184 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ C+EAL F+E+Q G+ D + + S + AC + A+ G +H + D
Sbjct: 421 YVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSAD 480
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + L K+ +T LI A G +AL+ F +M
Sbjct: 481 VSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQ 540
Query: 99 RGVKPDAITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G K + TFV + A ++ A + + H ++ K G E L+ + G+ G I
Sbjct: 541 AGAKYNVFTFVSSISASANLADIKQGKQIHARVI--KTGYTSETEISNALISLYGKCGSI 598
Query: 158 AKAE 161
A+
Sbjct: 599 EDAK 602
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 66/166 (39%), Gaps = 25/166 (15%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL----- 67
+F + G+ +K T +L CTH G + +G +H +K + D+ + L
Sbjct: 332 IFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYS 391
Query: 68 -----------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVG 110
KDV++ T++I +ALE F EMQ G+ PD I
Sbjct: 392 KYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLAS 451
Query: 111 VLVACSHAGLVDERIS-HFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
+ AC+ V + H + Y SI + LVY+ R G
Sbjct: 452 AISACAGIKAVHQGSQIHARVYVSGYSADVSI--WNGLVYLYARCG 495
>gi|387169573|gb|AFJ66232.1| hypothetical protein 34G24.32 [Capsella rubella]
Length = 598
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 149/399 (37%), Positives = 215/399 (53%), Gaps = 50/399 (12%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
YV + EEAL + + + +K + S L AC LG L W+H ++ IE+
Sbjct: 203 YVRNVQYEEALKTLKNMLSFSDIKPNKFSFASALAACARLGDLHHAKWVHSLMIDAGIEL 262
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ L AL DV A+I A G +A+ F EM+
Sbjct: 263 NTILSSALVDVYAKCGDIETSREVFYSVKWNDVSIWNAMITGFATHGLATEAIRVFSEME 322
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V PD+ITF+G+L ACSH GL++E F LMS+++ I+P +EHYG +V +LGRAG++
Sbjct: 323 AEHVSPDSITFLGILTACSHCGLLEEGKEFFGLMSQRFSIQPKLEHYGAMVDLLGRAGQV 382
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A +LI++MP+ D + LL + R + N E E A Q L + G YV+LSN Y
Sbjct: 383 KEAYDLIESMPIEPDVVIWRSLLSSARTYKNPELGEIAIQNLSKA---KSGDYVLLSNIY 439
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------VKA--------- 259
SS++KW+ +++RELM + I+K G +E GV+H F KA
Sbjct: 440 SSTKKWENAQKVRELMTKEGIRKAKGKSWVEFGGVIHRFKAGDTSHIDTKAIYKVLEGLI 499
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
GFV + VL D+ EEEKE LN H+EKLA+ + ++ PG IRI KN+R+C+
Sbjct: 500 QKAKSEGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGSEIRIQKNIRMCS 559
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH +SK+ NR ++ DR RFH F++G CSCKD+W
Sbjct: 560 DCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCKDYW 598
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 139/391 (35%), Positives = 218/391 (55%), Gaps = 47/391 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E + LF ++ +G T S+ AC G+LE G W+H +++K + +G L
Sbjct: 289 EHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTL 348
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+D+++ ++I A G G +AL+ F +M V+P+
Sbjct: 349 IDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNE 408
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
ITF+ VL ACSH+GL+DE +F LM +K+ I + H+ +V +LGRAGR+ +A + I+
Sbjct: 409 ITFLSVLTACSHSGLLDEGQYYFELM-KKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIE 467
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP+ V G LLG+CR+H N++ AA+Q+ EL P + G +V+LSN Y+S+ +
Sbjct: 468 EMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSD 527
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
++R++M E +KK P C +E++ VH FV + G+
Sbjct: 528 AAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGY 587
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ S VLF M+++++E L H+EKLA+ F ++ PG+ IRI KN+R+C DCH+A
Sbjct: 588 VPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKF 647
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S+V RE +V D NRFHHF +G CSC+D+W
Sbjct: 648 ASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 87/190 (45%), Gaps = 25/190 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL LF ++ H G ++ T+ SLL A + G LH + +K +++
Sbjct: 181 YSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMN 240
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G +A K+V++ ALI A G+G + F +M
Sbjct: 241 VHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLR 300
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+G +P T+ V AC+ +G +++ + H +++ K G +P L+ + ++G I
Sbjct: 301 QGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVI--KSGGQPIAYIGNTLIDMYAKSGSI 358
Query: 158 AKAEELIKNM 167
A+++ + +
Sbjct: 359 KDAKKVFRRL 368
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 23/169 (13%)
Query: 21 GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL----------------- 63
L ++ +L CT+L L+ G +H +I E D+ L
Sbjct: 100 SLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEA 159
Query: 64 -----GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHA 118
M KD+++ T LI + GQ ++AL F +M G +P+ T +L A S
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKA-SGT 218
Query: 119 GLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
G D + S KYG ++ L+ + R + +A+ + ++
Sbjct: 219 GPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSL 267
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 154/397 (38%), Positives = 212/397 (53%), Gaps = 47/397 (11%)
Query: 3 EDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVG 62
++ E+AL LF ++Q + + + VT+VSL+ C HLG+L G +H + ++ D
Sbjct: 425 QNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAV 484
Query: 63 LGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ AL KDV+ ++I+ M G G AL + M
Sbjct: 485 ITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEE 544
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
+KP+ TFV +L ACSH+GLV+E + F+ M + +RP +HY CLV + RAGR+ +
Sbjct: 545 RLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEE 604
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A+EL+K MP VL LL CR H N + A +L+ L N G YV+LSN Y+
Sbjct: 605 ADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAE 664
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA-------------------- 259
+RKW+ V IR LM + +KK PG LIEV V+ F +
Sbjct: 665 ARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLENLRLE 724
Query: 260 ----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
G++P+ S VL D++E K L H+E+LAI FGL+S G LI+I KNLRVC DC
Sbjct: 725 VEAEGYIPDTSCVLRDVNEPMKVKLLWGHSERLAIAFGLLSTPCGSLIKITKNLRVCVDC 784
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H T ISK+ RE +V D NRFHHF NG CSC DFW
Sbjct: 785 HNVTKYISKIVQREIIVRDANRFHHFVNGKCSCNDFW 821
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 25/189 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ E+ LFR + G D T+VSL+ C+ LE G LH I++K +E
Sbjct: 322 YVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESH 381
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L A+ K+V+T TA++V L+ G AL+ F +MQ
Sbjct: 382 LVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQE 441
Query: 99 RGVKPDAITFVGVLVACSHAG-LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V +++T V ++ C+H G L R H + + Y I L+ + + G+I
Sbjct: 442 EKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVIT--SALIDMYAKCGKI 499
Query: 158 AKAEELIKN 166
AE+L N
Sbjct: 500 HSAEKLFNN 508
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 13/128 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ E++ +F E+ GL VTM +LL AC G +VGM H Y++
Sbjct: 221 YVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVL------- 273
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
LGM DV LT+L+ + + G A F M R + I++ ++ G+
Sbjct: 274 -ALGMG-NDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSL----ISWNAMISGYVQNGM 327
Query: 121 VDERISHF 128
+ E + F
Sbjct: 328 IPESYALF 335
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 150/390 (38%), Positives = 215/390 (55%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
E++ +FR++ +T + VT S++LAC+ LG+L+ G +H Y+++ +E+DV +
Sbjct: 299 ESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFI 358
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
K+V + + +I M G +AL FYEM+ P+++
Sbjct: 359 DMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSV 418
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFV VL ACSH+G ++E SHF MS YGI P EHY C+V +LGRAG+I +A I N
Sbjct: 419 TFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINN 478
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP G LLGACRIH E AE A++LL L D G YV+LSN Y+ W+ V
Sbjct: 479 MPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMV 538
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGFV 262
K+ R M E+ I K G IE++ ++ F + G+V
Sbjct: 539 KKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSEDRFAYKNTQIESLWNSLKERMRELGYV 598
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ VL D+D+E K+ L H+EKLAI FGL++ G+ IRI KN+RVC DCHTA+ I
Sbjct: 599 PDLRFVLHDVDDEVKQEVLCGHSEKLAIVFGLLNSGEGMPIRITKNMRVCGDCHTASKFI 658
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S + R+ ++ D RFHH ++G CSC D+W
Sbjct: 659 SLITRRKIIMRDVKRFHHVQDGVCSCGDYW 688
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 29/215 (13%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN-IEVDVGLGMAL---- 67
LF ++ G D + L+ AC ++ A + G H +KKN I+ + L +L
Sbjct: 201 LFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMY 260
Query: 68 ------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFV 109
+DV+ +A+I A G+ +++ F +M V P+++TF
Sbjct: 261 MKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFA 320
Query: 110 GVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP- 168
+++ACS G + + S M + G+ +++Y + + + G I A + +P
Sbjct: 321 SIVLACSSLGSLKQGRSVHGYMI-RNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPE 379
Query: 169 ---MALDHFVLG-GLLGACRIHDNLEAAERAAQQL 199
+ + G G+ G C NL R+ QL
Sbjct: 380 KNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQL 414
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 146/375 (38%), Positives = 204/375 (54%), Gaps = 47/375 (12%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV-----------------DVGLG--- 64
+ T+ L+AC L AL +G +H Y ++ D+G
Sbjct: 476 NAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLV 535
Query: 65 ---MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLV 121
M K+ +T T+L+ M G G +AL F EM+ G K D +T + VL ACSH+G++
Sbjct: 536 FDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMI 595
Query: 122 DERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLG 181
D+ + +FN M +G+ P EHY CLV +LGRAGR+ A LI+ MPM V LL
Sbjct: 596 DQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLS 655
Query: 182 ACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKP 241
CRIH +E E AA+++ EL +N GSY +LSN Y+++ +WK V RIR LM + IKK
Sbjct: 656 CCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKR 715
Query: 242 PGCILIE-VDGVVHEFV-----------------------KAGFVPNKSEVLFDMDEEEK 277
PGC +E + G FV G+VP L D+D+EEK
Sbjct: 716 PGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLSDHMQRIKDIGYVPETGFALHDVDDEEK 775
Query: 278 ETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNR 337
+ L H+EKLA+ +G+++ G IRI KNLRVC DCHTA +S++ + E ++ D +R
Sbjct: 776 DDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHEIILRDSSR 835
Query: 338 FHHFKNGSCSCKDFW 352
FHHFKNG CSCK +W
Sbjct: 836 FHHFKNGLCSCKGYW 850
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 37/202 (18%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------ 54
Y + EAL + R++ G+ ++VT++S+L C +GAL G +H Y +K
Sbjct: 340 YAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLR 399
Query: 55 -------------------KNIEVDVGLGM------ALKDVMTLTALIVVLAMCGQGNKA 89
K +VD+ M +DV+T T +I + G NKA
Sbjct: 400 KNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKA 459
Query: 90 LEYFYEM--QIRGVKPDAITFVGVLVAC-SHAGL-VDERISHFNLMSEKYGIRPSIEHYG 145
LE EM + +P+A T LVAC S A L + ++I + L +++ + + +
Sbjct: 460 LELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSN-- 517
Query: 146 CLVYILGRAGRIAKAEELIKNM 167
CL+ + + G I A + NM
Sbjct: 518 CLIDMYAKCGDIGDARLVFDNM 539
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEAL +F E++ G D VT++ +L AC+H G ++ GM Y + + V G
Sbjct: 561 EEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGM---EYFNRMKTDFGVSPGPE- 616
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
L+ +L G+ N AL EM + +P + +V +L C G V+
Sbjct: 617 ----HYACLVDLLGRAGRLNAALRLIEEMPM---EPPPVVWVALLSCCRIHGKVE 664
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR-GVKPDAITFVGVLVACSHAGL--V 121
M + DV++ ++I A G+ ALE F +M G +PD IT V VL C+ G +
Sbjct: 188 MPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSL 247
Query: 122 DERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPM 169
++ F + SE + ++ CLV + + G + +A + NMP+
Sbjct: 248 GKQFHGFAVTSE---MIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPV 292
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 67/154 (43%), Gaps = 24/154 (15%)
Query: 10 ALLLFREVQHK-GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG---- 64
AL +F ++ ++ G D +T+V++L C +G +G H + + + ++ +G
Sbjct: 212 ALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLV 271
Query: 65 ------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
M +KDV++ A++ + G+ A+ F +MQ +K D +
Sbjct: 272 DMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVV 331
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPS 140
T+ + + GL E + M GI+P+
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSS-GIKPN 364
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 13/119 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EA +F + K D V+ +++ + +G E + L + ++ I++D
Sbjct: 274 YAKFGMMDEANTVFSNMPVK----DVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMD 329
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
V +T +A I A G G +AL +M G+KP+ +T + VL C+ G
Sbjct: 330 V---------VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVG 379
>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Brachypodium distachyon]
Length = 654
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 156/401 (38%), Positives = 223/401 (55%), Gaps = 50/401 (12%)
Query: 1 YVEDSACEEALLLFREV--QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
Y ++ +A+ LF+++ L + +T+VS+L AC + AL G LH YI+++ +
Sbjct: 255 YAKNERPADAIELFKDMMASDADLVPNSITIVSVLNACAGVNALSHGKLLHAYILRRGFD 314
Query: 59 VDVGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEYFYE 95
V + AL +DV++ +LI M G G +A++ F E
Sbjct: 315 SLVSVLNALMAMYMRCGCLEVGRHIFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQVFEE 374
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
M G P ITF+ VL ACSHAGLV+E F M E YG+ P EHY C+V +LGRAG
Sbjct: 375 MIHVGFSPSIITFISVLGACSHAGLVNEGKMLFESMVE-YGVTPRAEHYACMVDLLGRAG 433
Query: 156 RIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSN 215
++ +A ELI++M + V G LLGACRIH ++E AE A L +L P N G+YV+L++
Sbjct: 434 QLDEAMELIRSMHIEPSPQVWGALLGACRIHGHVEYAEIACSHLFDLEPRNAGNYVLLAD 493
Query: 216 RYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA---------------- 259
Y+ ++ +V ++EL+ E ++K GC IEV +H F
Sbjct: 494 IYARAKLHNQVGVLKELLEEHALEKVTGCSWIEVKKKLHSFTSVDNKNPPVEQLQALIGE 553
Query: 260 --------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
G+VP+ VL+D++ EEKE L H+EKLA+ FGL++ G +IRI KNLR+
Sbjct: 554 FVAQMKNQGYVPDTGIVLYDIEGEEKERILIGHSEKLAVAFGLINTCSGEVIRITKNLRL 613
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH+ T ISK RE VV D NRFHHF++G CSC D+W
Sbjct: 614 CEDCHSVTKFISKFTEREIVVRDVNRFHHFRDGVCSCGDYW 654
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 217/398 (54%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ ++ +EAL LFR +Q G+ D +VS LLAC+++G L++G +H +I+++ + +
Sbjct: 285 FAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFN 343
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG A +D++ A+I G+G AL F EM
Sbjct: 344 CILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNE 403
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD TF +L A SH+GLV+E F M + I P+ +HY CLV +L R+G +
Sbjct: 404 TGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVE 463
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +L+ +M + LL C + LE E A +LEL PD+ G ++SN Y+
Sbjct: 464 EASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYA 523
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+++KW KV+++R+LM + KK PGC IE+ G H FV
Sbjct: 524 ATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDL 583
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G++P V D++EE KE L+ H+E+LAI FGL++ PG + IIKNLRVC D
Sbjct: 584 EMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGD 643
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ISK+ +RE VV D RFHHFK+G CSC+D+W
Sbjct: 644 CHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 104/230 (45%), Gaps = 27/230 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
+A+ ++R ++ G+ GD+V M+ ++ ACT + +G +H ++++ + +DV +L
Sbjct: 192 DAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLV 251
Query: 69 DV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
D+ ++ +A+I A GQ ++AL F MQ G++PD+
Sbjct: 252 DMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSG 311
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
V L+ACS+ G + S + ++ + +Y + G +A A+ L N
Sbjct: 312 ALVSALLACSNIGFLKLGRSVHGFIVRRFDFNCILGTAAIDMY--SKCGSLASAQMLF-N 368
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE--LLPDNGGSYVILS 214
M D + ++ C H + A Q++ E + PD+ +LS
Sbjct: 369 MISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLS 418
>gi|387169524|gb|AFJ66185.1| hypothetical protein 11M19.3 [Arabidopsis halleri]
Length = 511
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 148/399 (37%), Positives = 217/399 (54%), Gaps = 50/399 (12%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
YV + EEAL + + + +K + S L AC LG L W+H ++ IE+
Sbjct: 116 YVRNVQYEEALKTLKNMLSFSDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDAGIEL 175
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ L AL DV A+I A G +A+ F EM+
Sbjct: 176 NAILSSALVDVYAKCGDIETSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEME 235
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V PD+ITF+G+L ACSH GL+ + +F++MS+++ I+P +EHYG +V +LGRAGR+
Sbjct: 236 AEHVSPDSITFLGLLTACSHCGLLGKGKVYFDIMSQRFSIQPKLEHYGAMVDLLGRAGRV 295
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A ELI++MP+ D + LL + R + N E E A Q L + G YV+LSN Y
Sbjct: 296 KEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKA---KSGDYVLLSNIY 352
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------VKA--------- 259
S+++KW+ +++RELM + I+K G +E GV+H F +KA
Sbjct: 353 STTKKWESAQKVRELMTKEGIRKAKGKSWVEYGGVIHRFKAGDTSHIEIKAIYKVLEGLI 412
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
GFV + VL D+ EEEKE LN H+EKLA+ + ++ PG IRI KN+R+C+
Sbjct: 413 QKTKSEGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCS 472
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH +SK+ NR ++ DR RFH F++G CSCKD+W
Sbjct: 473 DCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCKDYW 511
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 150/398 (37%), Positives = 218/398 (54%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ ++ E+AL F + +G + T+VS L AC +GAL+ G+ +H Y+ +++
Sbjct: 282 FSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLN 341
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL D ++ + +I A+ G KAL+YF M+
Sbjct: 342 LVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKF 401
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G KPD++ F+ VL ACSH+G V+E + F+ M Y I PS++HY +V +LGRAGR+
Sbjct: 402 TGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLD 461
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I+ MP+ D V G L ACR H N+E AE A+++LL+L P + GSYV LSN Y+
Sbjct: 462 EALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYA 521
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKS-EVLFDMDE--- 274
S +W +R+R M + K PG IEVD +H FV N++ E+ +DE
Sbjct: 522 SVGRWDDAERVRVSMRDHGAHKDPGWSFIEVDHKLHRFVAGDNTHNRAVEIYSKLDEISA 581
Query: 275 --EEK------------------ETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
EK E AL H+EKLA+ FG+VS PG +RI+KNLRVC D
Sbjct: 582 SAREKGYTKEIECVLHNIEEEEKEEALGYHSEKLALAFGIVSTRPGTTVRIVKNLRVCVD 641
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+ SK+ RE ++ D RFHHF +G CSC D+W
Sbjct: 642 CHSFMKYASKMSKREIILRDMKRFHHFNDGVCSCGDYW 679
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
M K+V++ T ++ + G KALE F+ M G +P+ T V L AC+ G +D
Sbjct: 267 MPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAG 326
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+ N +S G + ++ LV + + G I AE++
Sbjct: 327 LRIHNYLSGN-GFKLNLVIGTALVDMYAKCGNIEHAEKVF 365
>gi|302780547|ref|XP_002972048.1| hypothetical protein SELMODRAFT_96927 [Selaginella moellendorffii]
gi|300160347|gb|EFJ26965.1| hypothetical protein SELMODRAFT_96927 [Selaginella moellendorffii]
Length = 606
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 206/391 (52%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGL-TGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
AL L R + G +T +L+ AC +L A+ G LH I+ + +DV L AL
Sbjct: 216 SALELLRVMDQDGFRITSALTFATLVDACGNLSAIAQGRHLHDRIITSGVCIDVVLHTAL 275
Query: 68 KDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
++ +T ++++ A G AL+ F+ M+ G KPD+
Sbjct: 276 LNMYAKCGRVDEARELFDQTLEPNNITFSSMVAAYARNGHFGDALKLFWSMEQDGYKPDS 335
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TF VL ACSH G VD+ +F + GI EH+GC V +L RAG +A AE+ +
Sbjct: 336 VTFTHVLYACSHGGFVDQAWHYFTTLEPDRGIPLVAEHFGCAVDLLARAGWLADAEKFLN 395
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP+ D LL ACRIH N+E RAA+ + L P G Y +LSN YS + KW
Sbjct: 396 RMPIPPDSVSWMSLLQACRIHRNVEIGARAAEHVFRLAPHRAGPYSLLSNIYSDAGKWDM 455
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
++++LM +R IKKP G IE++G EF+ + G+
Sbjct: 456 AAKVQKLMRDRGIKKPGGRSWIEINGKTSEFIVGDSWHPDLVQICQEIQRVSKVMKEHGY 515
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ +VL D +EEEKE L H+EKLAI GL+ P I I+KN+RVC DCHTA +
Sbjct: 516 VPDTKQVLHDAEEEEKEDILYFHSEKLAIGLGLIKTPPKTTISIVKNIRVCPDCHTAAKV 575
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISKV R+ V+ D N FHH ++G+CSC+D+W
Sbjct: 576 ISKVTERKIVIRDINLFHHMEDGNCSCRDYW 606
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 144/397 (36%), Positives = 214/397 (53%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
+E+ E+A+ + R++Q+ G +++T+ S L AC+ L +L +G +H Y+ + + D+
Sbjct: 345 MENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDL 404
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
AL KDV+ +I+ AM G G + L F M
Sbjct: 405 TTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQS 464
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G+KP+++TF GVL CSH+ LV+E + FN M + + P HY C+V + RAGR+ +
Sbjct: 465 GIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHE 524
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A E I+ MPM G LLGACR++ N+E A+ +A +L E+ P+N G+YV L N +
Sbjct: 525 AYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILVT 584
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
++ W + R LM ER I K PGC ++V VH FV
Sbjct: 585 AKLWSEASEARILMKERGITKTPGCSWLQVGDRVHTFVVGDKNNMESDKIYNFLDELGEK 644
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
AG+ P+ VL D+D+EEK +L H+EKLA+ FG+++ IR+ KNLR+C DC
Sbjct: 645 MKSAGYKPDTDYVLQDIDQEEKAESLCSHSEKLAVAFGILNLNGQSSIRVFKNLRICGDC 704
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H A +SKV +V D RFHHF+NG+CSC+D W
Sbjct: 705 HNAIKYVSKVVGVTIIVRDSLRFHHFRNGNCSCQDLW 741
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 17/184 (9%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKD 69
L +F E+ G+ + VT+ S+L AC+ L L+ G +H + ++ + +++
Sbjct: 217 GLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGM---------IEN 267
Query: 70 VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFN 129
V +AL+ + A C +A F M R D +++ GVL A D+ ++ F+
Sbjct: 268 VFVCSALVSLYARCLSVKQARLVFDLMPHR----DVVSWNGVLTAYFTNREYDKGLALFS 323
Query: 130 LMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK---NMPMALDHFVLGGLLGACRIH 186
MS K G+ + ++ G+ KA E+++ N+ + + L AC I
Sbjct: 324 QMSSK-GVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSIL 382
Query: 187 DNLE 190
++L
Sbjct: 383 ESLR 386
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 25/183 (13%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLAC-----------THLGALEVGMW---------L 48
EA+ L+ ++ +G+ +++ AC H A+ GM +
Sbjct: 115 EAIRLYASLRARGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALI 174
Query: 49 HPYIMKKNIE--VDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
H Y K +E V + +KDV++ T++ CG L F EM GVKP+++
Sbjct: 175 HAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSV 234
Query: 107 TFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
T +L ACS L R H + ++G+ ++ LV + R + +A +
Sbjct: 235 TLSSILPACSELKDLKSGRAIHG--FAVRHGMIENVFVCSALVSLYARCLSVKQARLVFD 292
Query: 166 NMP 168
MP
Sbjct: 293 LMP 295
>gi|224118652|ref|XP_002331415.1| predicted protein [Populus trichocarpa]
gi|222873629|gb|EEF10760.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 141/373 (37%), Positives = 211/373 (56%), Gaps = 47/373 (12%)
Query: 27 VTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL------------------- 67
T+ ++L AC LG+L++G + YI+ + D + +L
Sbjct: 86 ATLATILSACADLGSLDMGKEIEEYILSNGFQSDRQVQTSLIHMFSKCGSIGKAISVFER 145
Query: 68 ---KDVMTLTALIVVLAMCGQGNKALEYFYEM-QIRGVKPDAITFVGVLVACSHAGLVDE 123
KD+ +++I A+ G +AL F++M +I+ +KPDA+ F +L+ACSH GLV++
Sbjct: 146 ISDKDLAAWSSMINGYAIHGMAEEALGLFHKMLEIKEIKPDAVVFTSILLACSHVGLVED 205
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGAC 183
+ F M + +GI PS+EHY CLV +LGRAG+ A + I+ MP+ L V L AC
Sbjct: 206 GLKFFKSMQKDFGIVPSVEHYMCLVDLLGRAGQFELALKTIRVMPVKLQAQVWAPFLSAC 265
Query: 184 RIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPG 243
H NLE E AA++LL + P + +YV+++N Y+S KWK+ R LM +R + K PG
Sbjct: 266 TKHCNLELGELAARKLLYMNPGSHANYVLMANLYTSMGKWKEAAVTRSLMIDRGLVKAPG 325
Query: 244 CILIEVDGVVHEFV------------------------KAGFVPNKSEVLFDMDEEEKET 279
+E++G VH F+ +AG+VP V+ D++ EEKE
Sbjct: 326 WSQVEINGSVHVFIAGDRSHTQSIDIYKKLEEINLKLAEAGYVPETDTVIHDLEREEKEE 385
Query: 280 ALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFH 339
AL +H+E+LAI FGL+S G +RI+KN R C DCH+A ISK+ R +V D +RFH
Sbjct: 386 ALKVHSERLAIAFGLISTEAGSTLRIMKNHRTCVDCHSALKFISKITGRHLIVRDGSRFH 445
Query: 340 HFKNGSCSCKDFW 352
HF++G C+CKDFW
Sbjct: 446 HFESGKCTCKDFW 458
>gi|147838430|emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]
Length = 978
Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 227/402 (56%), Gaps = 50/402 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEAL ++ +++ + D T+VSLL +C H+GAL +G+ +H + ++ + +
Sbjct: 577 YCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVEN 636
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL +DV T ++IV + G+G++A+ +F M +
Sbjct: 637 IFVGNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLM 696
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+P++ITF+G+L CSH GLV E + +F++MS ++ ++P I+HYGC+V + GRAG++
Sbjct: 697 AGVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLK 756
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E+I++ P D + LLG+C+IH N+E E A + L++L G V+LS Y+
Sbjct: 757 EALEVIRSSPSQHDPVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYA 816
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF-VKAGFVPNKSEVLFDMDE--- 274
++ + V R+R+L+ R IK PG IEV VH F V P+ E+ ++E
Sbjct: 817 EAKDLQGVARMRKLIQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEVIH 876
Query: 275 ---------EEK---------------ETALNLHTEKLAITFGLVSPMPGVLIRIIKNLR 310
EE ET+ + H+EKLAI +GL G + I+KNLR
Sbjct: 877 RASLVGYAMEESSLVAAPESNTQEYCWETSTSYHSEKLAIAYGLARTPEGTSLLIVKNLR 936
Query: 311 VCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
VC DCH T +SK ++RE +V DR RFHHF+ G CSCK+FW
Sbjct: 937 VCRDCHNFTKFVSKAFDREIIVRDRVRFHHFRGGHCSCKEFW 978
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
M +D+++ ++I G +AL+ + +M+I V D T V +L +C+H G +
Sbjct: 562 MPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGAL--- 618
Query: 125 ISHFNLMSEKY-GIRPSIEHY---GCLVYILGRAGRIAKAEELIKNMP 168
H + ++ G R +E+ L+ + + G +A A + +MP
Sbjct: 619 --HMGVQMHRFAGERRLVENIFVGNALIDMYAKCGSLASALSIFNSMP 664
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 149/402 (37%), Positives = 219/402 (54%), Gaps = 53/402 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ + +A+ + + KG D T ++L AC + LE GM +H ++ +E D
Sbjct: 669 YIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESD 728
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL +++ + ++I A G G K+L+ F +M++
Sbjct: 729 IVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKL 788
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+G PD +TFVGVL ACSHAGLV+E SHF+ MSE YG+ P +EH+ C+V +LGR G +
Sbjct: 789 QGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELN 848
Query: 159 KAEELIKNMPMALDHFVLGGLLGA-CRIHD-NLEAAERAAQQLLELLPDNGGSYVILSNR 216
K E+ + MP+ + + +LGA CR + N RAA+ LLE+ P N +Y++LSN
Sbjct: 849 KMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNM 908
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------ 258
Y+S KW V + R M + +KK GC + + VH FV
Sbjct: 909 YASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKEL 968
Query: 259 ------AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSP--MPGVLIRIIKNLR 310
AG++P L+D++ E KE L+ H+EK+A+ F L P MP IRI+KNLR
Sbjct: 969 NGKMRLAGYIPETRFALYDLEGESKEELLSYHSEKIAVAFVLTRPSKMP---IRILKNLR 1025
Query: 311 VCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
VC DCH+A IS++ R+ V+ D NRFHHF+NG CSC DFW
Sbjct: 1026 VCGDCHSAFKYISQIVERQIVLRDSNRFHHFENGKCSCGDFW 1067
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 29/206 (14%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EA+ F+E++ L TM+S L +C LG + VG LH +K +++DV + AL
Sbjct: 473 EAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALL 532
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGN-KALEYFYEMQIRGVKPDA 105
D ++ +LI LA +A+E F M G P+
Sbjct: 533 ALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNR 592
Query: 106 ITFVGVLVACSHAGL--VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
+TF+ +L A S L + ++I H ++ +IE+ L+ G+ G + E +
Sbjct: 593 VTFITILAAVSSLSLHELGKQI-HALVLKRNVAADTAIEN--ALLACYGKCGDMGYCENI 649
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNL 189
M D ++ IH+ L
Sbjct: 650 FSRMSDRQDEVSWNSMISG-YIHNEL 674
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 99/247 (40%), Gaps = 39/247 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLG--ALEVGMWLHPYIMKKNIE 58
Y + EA LFR++ G + S++ AC G L+ GM +H + K
Sbjct: 149 YTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYV 208
Query: 59 VDV------------GLGMA-----------LKDVMTLTALIVVLAMCGQGNKALEYFYE 95
DV LGM +++++L ++I V G A + F
Sbjct: 209 NDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFST 268
Query: 96 MQIR----GVKPDAITFVGVLVA-CS--HAGLVDERISHFNLMSEKYGIRPSIEHYGCLV 148
MQ G+KP+ TF ++ A CS ++GLV + EK G + LV
Sbjct: 269 MQKEVMGDGLKPNEYTFGSLISATCSLANSGLV--LLEQLLTRVEKSGFLHDLYVGSALV 326
Query: 149 YILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAE--RAAQQLLELLPDN 206
+AG I A+ + + M + G ++G R EA E + +EL P+
Sbjct: 327 SGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPN- 385
Query: 207 GGSYVIL 213
SY+I+
Sbjct: 386 --SYMII 390
>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
Length = 635
Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 151/396 (38%), Positives = 217/396 (54%), Gaps = 52/396 (13%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+AL +F + G+ +VT V+++ C + +G +H I ++ E +V +G AL
Sbjct: 241 RDALKVFLLMTLDGVEPTEVTFVTVVDVCADIAVFGIGREVHGVIDARS-EANVCVGNAL 299
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ-----IRG 100
KD++T ++I V G G +ALE + MQ I G
Sbjct: 300 INMYGKCASPDEARKVFDAMQRKDIITWNSMIAVYGQNGYGFQALEIYKRMQESRMTILG 359
Query: 101 VKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA 160
+ D ITF+GVL ACSHAGLV + ++ M YG +P+ GCL+ +LGRAG + +A
Sbjct: 360 ITHDDITFIGVLFACSHAGLVKDSCKLYSSMIGDYGFKPTSLQCGCLIDLLGRAGWLDEA 419
Query: 161 EELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSS 220
EE I +MP DH + LLGAC H ++E A RAA +++ L P + GSYV LSN Y+ +
Sbjct: 420 EEFINSMPYHPDHTIWTILLGACITHADVERAARAADRIMALRPTDSGSYVALSNLYALA 479
Query: 221 RKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA--------------------- 259
+W + R+R+LM +R + K G IE+ GV+HEF+
Sbjct: 480 ERWDDMARMRKLMDQRGVFKMAGKSSIEIGGVLHEFIAGDTSHPRKREIYEELRRIEGVI 539
Query: 260 ---GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCH 316
G+VP+ VL + E KE H+E+LAI FG++S G +RI+KNLRVC DCH
Sbjct: 540 RERGYVPDIKAVLHNAAREAKEKMCCFHSERLAIAFGMISSPGGTELRIMKNLRVCPDCH 599
Query: 317 TATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+AT IISK R+ +V D NRFH F+NGSCSC+D+W
Sbjct: 600 SATKIISKFSGRKIIVRDANRFHEFRNGSCSCEDYW 635
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 29/151 (19%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
+AL L + +G++ + +T + LL A L L+ G LH I D+ + L
Sbjct: 141 DALNLLEIMDLEGISPNSITFIELLGAVAALSWLDRGRALHRRIACCGFLADIFVANCLI 200
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+ V+ TAL+ A+ G AL+ F M + GV+P +
Sbjct: 201 NMYAKCRSLADACSVFESLTSRSVIAWTALVAAYALNGFFRDALKVFLLMTLDGVEPTEV 260
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGI 137
TFV V+ C+ I+ F + E +G+
Sbjct: 261 TFVTVVDVCAD-------IAVFGIGREVHGV 284
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 217/398 (54%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EEAL F E++ GL ++ T LL +C + AL G LH I K E
Sbjct: 306 YSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDH 365
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL +D +T +A+I L+ G G +AL F EM
Sbjct: 366 IIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLA 425
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
P +TFVGVL AC+H G V E + N + ++ GI P +EHY C+V +L +AGR+
Sbjct: 426 AKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLD 485
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE +K+ P+ D LL AC +H N ++ A+ +L++ P + G+Y++LSN Y+
Sbjct: 486 EAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYA 545
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+++W V +IR+LM ERN+KK PG IE+ +H FV
Sbjct: 546 KAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLT 605
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VP+ + V D+++E+K ++ H+EKLAI +GL+ G IR+IKNLR+C D
Sbjct: 606 MIRPMGYVPDIAAVFHDVEDEQKREYVSYHSEKLAIAYGLMKTPSGAPIRVIKNLRMCVD 665
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A +ISKV NR +V D NRFH F +G CSC D+W
Sbjct: 666 CHSAVKLISKVTNRMIIVRDANRFHCFGDGGCSCADYW 703
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 83/194 (42%), Gaps = 35/194 (18%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
+E+ EAL + + + + D VT V+ C+HL L +G+ +H + + E D
Sbjct: 206 LENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDS 265
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ A+ K+V++ TA++ + G +AL +F EM++
Sbjct: 266 FVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVD 325
Query: 100 GVKPDAITFVGVLVACS------HAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGR 153
G+ P+ TF +L +C+ H L+ RI +K G I L+ + +
Sbjct: 326 GLLPNEYTFAVLLNSCAGISALGHGKLLHTRI-------KKSGFEDHIIVGNALINMYSK 378
Query: 154 AGRIAKAEELIKNM 167
+G I A ++ M
Sbjct: 379 SGSIEAAHKVFLEM 392
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 147/393 (37%), Positives = 224/393 (56%), Gaps = 48/393 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEAL +F + +G++ + VT SLL A + L L+ G H +++++ + L +L
Sbjct: 236 EEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSL 295
Query: 68 KDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI-RGVKPD 104
D+ ++ A++V + G G + LE F M+ + VKPD
Sbjct: 296 IDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 355
Query: 105 AITFVGVLVACSHAGLVDERISHFN-LMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
A+T + VL CSH + D ++ F+ +++ +YG +P EHYGC+V +LGRAGRI +A E
Sbjct: 356 AVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEF 415
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
IK MP VLG LLGACR+H +++ E ++L+E+ P+N G+YVILSN Y+S+ +W
Sbjct: 416 IKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRW 475
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVHEF------------------------VKA 259
V +R +M ++ + K PG I+ + +H F +A
Sbjct: 476 ADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQA 535
Query: 260 GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTAT 319
G+VP+ S VL+D+DEE+KE L H+EKLA+TFGL++ G+ IR+ KNLR+C DCH
Sbjct: 536 GYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFA 595
Query: 320 NIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
I SKV+ RE + D+NRFH +G CSC D+W
Sbjct: 596 KIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 86/191 (45%), Gaps = 25/191 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL +F E+ ++ T ++L +C L +G +H I+K N +
Sbjct: 128 YSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSH 187
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G +L +DV++ TA+I A G +ALE F+ +
Sbjct: 188 IFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHS 247
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G+ P+ +T+ +L A S L+D + +H +++ + +++ L+ + + G +
Sbjct: 248 EGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN--SLIDMYSKCGNL 305
Query: 158 AKAEELIKNMP 168
+ A L NMP
Sbjct: 306 SYARRLFDNMP 316
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHA-GLVDE 123
M K+V++ TA+I + G ++AL F EM KP+ TF VL +C A GL
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
+ H ++ K+ I L+ + +AG+I +A E+ + +P
Sbjct: 173 KQIHGLIV--KWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 217/398 (54%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ ++ +EAL LFR +Q G+ D +VS LLAC+++G L++G +H +I+++ + +
Sbjct: 285 FAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFN 343
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG A +D++ A+I G+G AL F EM
Sbjct: 344 CILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNE 403
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD TF +L A SH+GLV+E F M + I P+ +HY CLV +L R+G +
Sbjct: 404 TGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVE 463
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +L+ +M + LL C + LE E A +LEL PD+ G ++SN Y+
Sbjct: 464 EASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYA 523
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+++KW KV+++R+LM + KK PGC IE+ G H FV
Sbjct: 524 ATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDL 583
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G++P V D++EE KE L+ H+E+LAI FGL++ PG + IIKNLRVC D
Sbjct: 584 EMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGD 643
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ISK+ +RE VV D RFHHFK+G CSC+D+W
Sbjct: 644 CHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 106/235 (45%), Gaps = 37/235 (15%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
+A+ ++R ++ G+ GD+V M+ ++ ACT + +G +H ++++ + +DV +L
Sbjct: 192 DAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLV 251
Query: 69 DV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
D+ ++ +A+I A GQ ++AL F MQ G++PD+
Sbjct: 252 DMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSG 311
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCL-----VYILGRAGRIAKAE 161
V L+ACS+ G + S + ++ + C+ + + + G +A A+
Sbjct: 312 ALVSALLACSNIGFLKLGRSVHGFIVRRF-------DFNCILGTAAIDMYSKCGSLASAQ 364
Query: 162 ELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE--LLPDNGGSYVILS 214
L NM D + ++ C H + A Q++ E + PD+ +LS
Sbjct: 365 MLF-NMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLS 418
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 151/400 (37%), Positives = 213/400 (53%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHP--YIMKKNIE 58
Y + +A+ + + +GL + T VS+L AC + AL+ G +H +++ +E
Sbjct: 253 YARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLE 312
Query: 59 VDVGLGMALK----------------------DVMTLTALIVVLAMCGQGNKALEYFYEM 96
DV + AL D++ +LI A GQ KALE F M
Sbjct: 313 SDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERM 372
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
++ G++P ITF VL ACSHAG++D+ HF +GI P EH+GC+V +LGRAG
Sbjct: 373 RLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGW 432
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
I +E+L+ +MP LGACR + N++ A AA+ L +L P YV+LSN
Sbjct: 433 IVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKRAPYVLLSNM 492
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------ 258
Y+ + +W V R+R+ M K G IEV VHEF+
Sbjct: 493 YAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRL 552
Query: 259 ------AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
AG+VP+ VL D+ +E KET + H+EKLA+ F L++ G IR++KNLRVC
Sbjct: 553 TKLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVC 612
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
NDCHTA+ ISK+ NRE VV D NRFH F+NG+CSC D+W
Sbjct: 613 NDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 652
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 90/215 (41%), Gaps = 24/215 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL LFR++ G+ +KVT+VS L AC LG L G +H + + I+
Sbjct: 152 YARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSG 211
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL K+V+ +A+ A + A+ + M +
Sbjct: 212 VVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDL 271
Query: 99 RGVKPDAITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G+ P++ TFV VL AC+ A L R H + G+ + LV + + G +
Sbjct: 272 EGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNL 331
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAA 192
A A + + LD + L+ H E A
Sbjct: 332 ALAGNMFDKIAH-LDLVLWNSLIATNAQHGQTEKA 365
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 107/260 (41%), Gaps = 37/260 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE-- 58
+ E+ + L FR + +G+ +V + L ACT + +G + I+ IE
Sbjct: 51 FAENRDFDRCWLFFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEE 110
Query: 59 --------------------VDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V L M+ +DV+ +A++ A G +AL F +M +
Sbjct: 111 SIVQTALVSLYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDL 170
Query: 99 RGVKPDAITFVGVLVACSHAG------LVDERISHFNLMSEKYGIRPSIEHYGCLVYILG 152
GV P+ +T V L AC+ G L+ +R+ E GI+ + LV + G
Sbjct: 171 DGVAPNKVTLVSGLDACASLGDLRSGALMHQRV-------EAQGIQSGVVVGTALVNLYG 223
Query: 153 RAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQL-LELLPDNGGSYV 211
+ GRI A E + + + + A +D A R ++ LE L N ++V
Sbjct: 224 KCGRIEAAAEAFGQI-VEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFV 282
Query: 212 ILSNRYSSSRKWKKVKRIRE 231
+ + ++ K+ +RI E
Sbjct: 283 SVLDACAAIAALKQGRRIHE 302
>gi|357519251|ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523936|gb|AET04390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 216/390 (55%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL +F E+ + ++ + S L +C L LE G +H +K +E V G +L
Sbjct: 338 EALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLV 397
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
K+V++ ++IV A G G AL F EM GV+ D I
Sbjct: 398 VMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREGVESDEI 457
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
T G+L ACS +G++ + F + K ++ ++EHY C+V +LGR G + +AE L +
Sbjct: 458 TLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVLGRCGEVEEAEALATS 517
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP+ + V LL ACR+H +L+ AERAA+++ E+ PD +YV+LSN Y+SSR+W +V
Sbjct: 518 MPVEANSMVWLVLLSACRVHSSLDVAERAAKRIFEMEPDCSAAYVLLSNLYASSRRWLEV 577
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GFV 262
RIR M I K PG I + G+ HEF+ A G++
Sbjct: 578 ARIRMKMKHNGIVKQPGSSWITLKGMRHEFLSADRSHPLTEEIYEKLVWLGVKLRELGYI 637
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P++ L D++ E+ E L+ H+E+LAI FGL+S + G I I+KNLRVC DCHTA ++
Sbjct: 638 PDQQFALHDVEIEQNEEMLSYHSERLAIAFGLLSTVEGSTITIMKNLRVCGDCHTAITLM 697
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+K+ NRE VV D +RFHHFKNG CSC D+W
Sbjct: 698 AKIVNREIVVRDSSRFHHFKNGICSCGDYW 727
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 147/400 (36%), Positives = 224/400 (56%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHK-GLTGDKVTMVSLLLACTH-LGALEVGMWLHP-------- 50
YV++ + A+ LF +++ + G+ ++ T S+L AC ++E G H
Sbjct: 371 YVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFS 430
Query: 51 ------------YIMKKNIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM 96
Y + NIE +V +D+++ ++I A G G K+L+ F EM
Sbjct: 431 NALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEM 490
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ + ++ D ITF+GV+ AC+HAGLV+E +F+LM + Y I P++EHY C+V + RAG
Sbjct: 491 RSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGM 550
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ KA +LI MP + LL ACR+H N++ E AA++L+ L P + +YV+LSN
Sbjct: 551 LEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNI 610
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+++ W++ ++R+LM + +KK G IEV F+
Sbjct: 611 YATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEEL 670
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
AG+ P+ VL D++EE KE L+ H+E+LAI FGL++ PG I+I+KNLRVC
Sbjct: 671 SIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVC 730
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHT +ISK+ R+ VV D NRFHHFK GSCSC D+W
Sbjct: 731 GDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 770
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 23/182 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+EAL LF ++ G D ++ +L C L VG +H +K DV +G +L
Sbjct: 74 KEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSL 133
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
K+V++ T+L+ G +AL+ F +MQ+ G+KP+
Sbjct: 134 VDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNP 193
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
TF VL + G V++ + + M K G+ +I +V + ++ ++ A+ +
Sbjct: 194 FTFAAVLGGLAADGAVEKGV-QVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFD 252
Query: 166 NM 167
+M
Sbjct: 253 SM 254
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ E+AL LF ++Q +G+ + T ++L GA+E G+ +H ++K ++
Sbjct: 168 YRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDST 227
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G ++ ++ ++ ++I G +A E FY M++
Sbjct: 228 IFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRL 287
Query: 99 RGVKPDAITFVGVLVACSH 117
GVK F V+ C++
Sbjct: 288 EGVKLTQTIFATVIKLCAN 306
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 146/399 (36%), Positives = 221/399 (55%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTH-LGALEVGMWLHP--------- 50
Y + E A+ +F ++ +G+ ++ T S+L AC ++E G H
Sbjct: 468 YAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSN 527
Query: 51 -----------YIMKKNIEV--DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
Y + NIE +V +D+++ ++I A G G K+L+ F EM+
Sbjct: 528 ALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMR 587
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+ ++ D ITF+GV+ AC+HAGLV+E +F+LM + Y I P++EHY C+V + RAG +
Sbjct: 588 SKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGML 647
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA +LI MP + LL ACR+H N++ E AA++L+ L P + +YV+LSN Y
Sbjct: 648 EKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIY 707
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+++ W++ ++R+LM + +KK G IEV F+
Sbjct: 708 ATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELS 767
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
AG+ P+ VL D++EE KE L+ H+E+LAI FGL++ PG I+I+KNLRVC
Sbjct: 768 IRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCG 827
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHT +ISK+ R+ VV D NRFHHFK GSCSC D+W
Sbjct: 828 DCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 26/187 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ + A+ LF +++ +G+ + T ++L A + ++ H ++K N E
Sbjct: 371 YVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPSQI----HALVVKTNYENS 426
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL KD++ +A++ A G A++ F ++
Sbjct: 427 PSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAK 486
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+P+ TF VL AC+ E+ F+ S K G ++ LV + + G I
Sbjct: 487 EGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIE 546
Query: 159 KAEELIK 165
A E+ K
Sbjct: 547 SANEVFK 553
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 23/182 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+EAL LF ++ G D ++ +L C L VG +H +K DV +G +L
Sbjct: 74 KEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSL 133
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
K+V++ T+L+ G +AL+ F +MQ+ G+KP+
Sbjct: 134 VDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNP 193
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
TF VL + G V++ + + M K G+ +I +V + ++ ++ A+ +
Sbjct: 194 FTFAAVLGGLAADGAVEKGV-QVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFD 252
Query: 166 NM 167
+M
Sbjct: 253 SM 254
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ E+AL LF ++Q +G+ + T ++L GA+E G+ +H ++K ++
Sbjct: 168 YRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDST 227
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G ++ ++ ++ ++I G +A E FY M++
Sbjct: 228 IFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRL 287
Query: 99 RGVKPDAITFVGVLVACSH 117
GVK F V+ C++
Sbjct: 288 EGVKLTQTIFATVIKLCAN 306
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 78/180 (43%), Gaps = 27/180 (15%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EA LF ++ +G+ + +++ C ++ + LH ++K + D+ + AL
Sbjct: 277 EAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALM 336
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
++V++ TA+I G+ ++A+ F +M+ GV+P+
Sbjct: 337 VAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNH 396
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYI-LGRAGRIAKAEELI 164
T+ +L A +A + +I H ++ Y PS+ Y +G A AK ELI
Sbjct: 397 FTYSTILTA--NAAVSPSQI-HALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELI 453
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 266 bits (681), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 141/391 (36%), Positives = 219/391 (56%), Gaps = 48/391 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E + LF ++ +G T S+L AC G+LE G W+H +++K + +G L
Sbjct: 289 EHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTL 347
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+D+++ ++I A G G +AL+ F +M V+P+
Sbjct: 348 IDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNE 407
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
ITF+ VL ACSH+GL+DE +F LM +K+ I + H+ +V +LGRAGR+ +A + I+
Sbjct: 408 ITFLSVLTACSHSGLLDEGQYYFELM-KKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIE 466
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP+ V G LLGACR+H N++ AA+Q+ EL P + G +V+LSN Y+S+ +
Sbjct: 467 EMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSD 526
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
++R++M E +KK P C +E++ VH FV + G+
Sbjct: 527 AAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGY 586
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ S VLF M+++++E L H+EKLA+ F ++ PG+ IRI KN+R+C DCH+A
Sbjct: 587 VPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKF 646
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S+V RE +V D NRFHHF +G CSC+D+W
Sbjct: 647 ASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL LF ++ H G ++ T+ SLL A + G LH + +K +++
Sbjct: 181 YSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMN 240
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G +A K+V++ ALI A G+G + F +M
Sbjct: 241 VHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLR 300
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+G +P T+ VL S L + H +++ K G +P L+ + ++G I
Sbjct: 301 QGFEPTHFTYSSVLACASSGSLEQGKWVHAHVI--KSGGQPIAYIGNTLIDMYAKSGSIK 358
Query: 159 KAEELIKNM 167
A+++ + +
Sbjct: 359 DAKKVFRRL 367
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 68/168 (40%), Gaps = 23/168 (13%)
Query: 22 LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL------------------ 63
L ++ +L CT+L L+ G +H +I E D+ L
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 64 ----GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
M KD+++ T LI + GQ ++AL F +M G +P+ T +L A S G
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKA-SGTG 219
Query: 120 LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
D + S KYG ++ L+ + R + +A+ + ++
Sbjct: 220 PSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSL 267
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 266 bits (681), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 220/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ E+AL F + + DK T+ S++ AC G LE+G +H YI K +D
Sbjct: 611 YVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLD 670
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG ++ ++V+ T++I A+ GQG +A+ F M
Sbjct: 671 VFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMIN 730
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ P+ ++FVGVL ACSHAGL++E +F LM E YGIRP EH+ C+V + GRAGR+
Sbjct: 731 EGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLN 790
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+ +E I N ++ V L +CR+H N+E ++LLEL P + G Y++ S+ +
Sbjct: 791 EIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICA 850
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ +W++ +IR LM +R +KK P I++ VH FV
Sbjct: 851 TEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDELIG 910
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G+ + + V+ D+++E+++ L H+EKLAI +G++S PG IR++KNLRVC D
Sbjct: 911 RLKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKNLRVCID 970
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH S++ RE ++ D +RFHHFK+G CSC D+W
Sbjct: 971 CHNFIKYASELLGREIIIRDIHRFHHFKHGHCSCADYW 1008
>gi|145359106|ref|NP_199912.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635749|sp|Q9FI49.2|PP428_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g50990
gi|332008636|gb|AED96019.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 534
Score = 266 bits (681), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 148/399 (37%), Positives = 215/399 (53%), Gaps = 50/399 (12%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
YV + EEAL + + + +K + S L AC LG L W+H ++ IE+
Sbjct: 139 YVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIEL 198
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ L AL DV A+I A G +A+ F EM+
Sbjct: 199 NAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEME 258
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V PD+ITF+G+L CSH GL++E +F LMS ++ I+P +EHYG +V +LGRAGR+
Sbjct: 259 AEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRV 318
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A ELI++MP+ D + LL + R + N E E A Q L + G YV+LSN Y
Sbjct: 319 KEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKA---KSGDYVLLSNIY 375
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------VKA--------- 259
SS++KW+ +++RELM++ I+K G +E G++H F KA
Sbjct: 376 SSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLI 435
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
GFV + VL D+ EEEKE LN H+EKLA+ + ++ PG IRI KN+R+C+
Sbjct: 436 QKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCS 495
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH +SK+ NR ++ DR RFH F++G CSC+D+W
Sbjct: 496 DCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/376 (38%), Positives = 202/376 (53%), Gaps = 48/376 (12%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKD--------------- 69
+ +T+++LL C L A G +H Y ++ +E D+ +G AL D
Sbjct: 486 NNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVF 545
Query: 70 -------VMTLTALIVVLAMCGQGNKALEYFYEMQIRG-VKPDAITFVGVLVACSHAGLV 121
V+T LI+ M G G++AL F M G P+ +TF+ L ACSH+GLV
Sbjct: 546 DRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLV 605
Query: 122 DERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM-PMALDHFVLGGLL 180
D + F M YG P+ + C+V +LGRAGR+ +A +I +M P +L
Sbjct: 606 DRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTML 665
Query: 181 GACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKK 240
GACR+H N++ AA++L EL PD YV+L N YS++ W+ +R +M +R + K
Sbjct: 666 GACRLHRNVKLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAK 725
Query: 241 PPGCILIEVDGVVHEFV------------------------KAGFVPNKSEVLFDMDEEE 276
PGC IE+DG +H F+ + G+VP+ S VL D+DE E
Sbjct: 726 EPGCSWIELDGAIHRFMAGESAHPESAQVHAHMDALWERMRREGYVPDTSCVLHDVDEAE 785
Query: 277 KETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRN 336
K L H+EKLAI FGL+ PG IR+ KNLRVCNDCH A IS++ RE V+ D
Sbjct: 786 KAAMLRYHSEKLAIAFGLLRAPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVR 845
Query: 337 RFHHFKNGSCSCKDFW 352
RFHHF++G+CSC D+W
Sbjct: 846 RFHHFRDGTCSCGDYW 861
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 38/146 (26%)
Query: 9 EALLLFREVQH-----KGLTGD----KVTMVSLLLACTHL------------------GA 41
AL LFR H + + D T+VS+LLAC+HL G
Sbjct: 126 SALCLFRRWGHALDALRDMLADHEVSSFTLVSVLLACSHLADQGHRLGREAHAFALKHGF 185
Query: 42 LEVGMWLHPYIMKKNIEVDVGL-----------GMALKDVMTLTALIVVLAMCGQGNKAL 90
L+ G P+ ++ +GL G + D++T +I +L G+ +A+
Sbjct: 186 LDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAV 245
Query: 91 EYFYEMQIRGVKPDAITFVGVLVACS 116
+ Y+M GV+PD +TF L ACS
Sbjct: 246 QVLYDMVALGVRPDGVTFASALPACS 271
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 27/144 (18%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK-KNIEVD 60
V+ CEEA+ + ++ G+ D VT S L AC+ L L VG +H +++K ++ +
Sbjct: 236 VQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAAN 295
Query: 61 VGLGMALKDVMT------------------------LTALIVVLAM-CGQGNKALEYFYE 95
+ AL D+ A+I A G +A+E F
Sbjct: 296 SFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSR 355
Query: 96 MQIR-GVKPDAITFVGVLVACSHA 118
M+ G P T GVL AC+ +
Sbjct: 356 MEAEAGCAPSETTMAGVLPACARS 379
>gi|9758246|dbj|BAB08745.1| unnamed protein product [Arabidopsis thaliana]
Length = 511
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/399 (37%), Positives = 215/399 (53%), Gaps = 50/399 (12%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
YV + EEAL + + + +K + S L AC LG L W+H ++ IE+
Sbjct: 116 YVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIEL 175
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ L AL DV A+I A G +A+ F EM+
Sbjct: 176 NAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEME 235
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V PD+ITF+G+L CSH GL++E +F LMS ++ I+P +EHYG +V +LGRAGR+
Sbjct: 236 AEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRV 295
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A ELI++MP+ D + LL + R + N E E A Q L + G YV+LSN Y
Sbjct: 296 KEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKA---KSGDYVLLSNIY 352
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------VKA--------- 259
SS++KW+ +++RELM++ I+K G +E G++H F KA
Sbjct: 353 SSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLI 412
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
GFV + VL D+ EEEKE LN H+EKLA+ + ++ PG IRI KN+R+C+
Sbjct: 413 QKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCS 472
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH +SK+ NR ++ DR RFH F++G CSC+D+W
Sbjct: 473 DCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 511
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 149/399 (37%), Positives = 216/399 (54%), Gaps = 48/399 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + + E+ FRE+ + ++V++ +L AC+ GA E G LH ++ K
Sbjct: 411 FSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSGYSWI 470
Query: 61 VGLGMALKD-----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQ 97
V + AL D +++ T++I LAM G G +A+ F EM
Sbjct: 471 VSVNNALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMT 530
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV PD I+F+ +L ACSHAGL+ E +F+ M Y I P++EHYGC+V + GR+G++
Sbjct: 531 ESGVMPDEISFISLLYACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKL 590
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA I MP+ V LLGAC H N+E AE+ Q+L EL P+N G V+LSN Y
Sbjct: 591 QKAYSFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNVY 650
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+++ KWK V IR+ M + IKK L+EV +++F
Sbjct: 651 ATAGKWKDVASIRKSMIVQRIKKITAWSLVEVGKTMYKFTACEKKKEIDIEAHEKLKEII 710
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+AG+ P + L+D++EEEKE ++ H+EKLA+ F L G IRI+KNLR+C
Sbjct: 711 LRLRDEAGYAPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLPKGANIRIVKNLRIC 770
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDF 351
DCH + S+VY E V+ DRNRFH FK+GSCSC D+
Sbjct: 771 RDCHAVMKLTSRVYGVEIVIRDRNRFHSFKDGSCSCGDY 809
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 3/143 (2%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
M +D ++ + +IV + G N++ YF E+ ++P+ ++ GVL ACS +G E
Sbjct: 396 MPHRDDVSWSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAF-EF 454
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACR 184
+ EK G + L+ + R G + A + + M ++
Sbjct: 455 GKTLHGFVEKSGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLA 514
Query: 185 IHDNLEAAERAAQQLLE--LLPD 205
+H + E A R ++ E ++PD
Sbjct: 515 MHGHGEEAIRIFNEMTESGVMPD 537
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 219/391 (56%), Gaps = 48/391 (12%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV-----GLG 64
AL F ++ + D T+VS+L AC LG+LE+G ++ K+ I+ ++ L
Sbjct: 194 ALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLD 253
Query: 65 MALK-----------------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
M LK +V++ + +IV AM G +AL F MQ G++P+ +T
Sbjct: 254 MHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVT 313
Query: 108 FVGVLVACSHAGLVDERISHFNLM--SEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
F+GVL ACSHAGLV+E +F+LM S + P EHY C+V +LGR+G + +A E IK
Sbjct: 314 FLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIK 373
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP+ D + G LLGAC +H ++ ++ A L+E PD G +V+LSN Y+++ KW
Sbjct: 374 KMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDC 433
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEF------------------------VKAGF 261
V ++R M + KK +E +G +H F K G+
Sbjct: 434 VDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGY 493
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ V D++ EEKE +L+ H+EKLAI FGL+ PG IR++KNLR C+DCH +
Sbjct: 494 VPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKF 553
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+S + + E ++ D+NRFHHF+NG CSCK+FW
Sbjct: 554 VSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 22/141 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN---- 56
YV + E+LLL+++++ G+ D+ T ++ A + LG G LH +++K
Sbjct: 84 YVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCL 143
Query: 57 -------IEVDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + + G M +KD++ A + V G ALEYF +M
Sbjct: 144 GIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCA 203
Query: 99 RGVKPDAITFVGVLVACSHAG 119
V+ D+ T V +L AC G
Sbjct: 204 DAVQFDSFTVVSMLSACGQLG 224
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/396 (36%), Positives = 220/396 (55%), Gaps = 47/396 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++S EAL LF ++Q K D +TM +L AC L AL+ G +H +I+++ D
Sbjct: 748 YSQNSLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSD 806
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL KD+++ T +I M G GN+A+ F EM+I
Sbjct: 807 LHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRI 866
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD +F +L ACSH+GL++E FN M + G+ P +EHY C+V +L R G ++
Sbjct: 867 AGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLS 926
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
KA + I++MP+ D + G LL CRIH +++ AE+ A+ + EL PDN YV+L+N Y+
Sbjct: 927 KAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYA 986
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSE----------- 267
+ KW++VK++R+ M +R K+ PGC IEV G + FV +++
Sbjct: 987 EAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTM 1046
Query: 268 -------------VLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
VL + D+ EKE H+EK A+ FG+++ PG +R+ KN RVC D
Sbjct: 1047 QMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNQRVCGD 1106
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKD 350
CH +SK RE V+ D NRFHHFK+G CSC+D
Sbjct: 1107 CHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSCRD 1142
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 28/192 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV + +A+ LF E+Q KG+ D T+ S++ AC +L+ G +H Y++K + +
Sbjct: 647 YVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSN 706
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL KD+++ +I + N+ALE F +MQ
Sbjct: 707 LPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQ- 765
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGC-LVYILGRAGR 156
+ KPD IT VL AC+ +D+ R H +++ Y S H C LV + + G
Sbjct: 766 KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYF---SDLHVACALVDMYAKCGL 822
Query: 157 IAKAEELIKNMP 168
+ A+ L +P
Sbjct: 823 LVLAQLLFDMIP 834
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK-------------- 55
L +F ++ G+ D T+VS+L+A ++G L +G LH + +K
Sbjct: 555 GLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLD 614
Query: 56 --------NIEVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
N +V + M +++ T+ I G + A+ F EMQ +GV+PD T
Sbjct: 615 MYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYT 674
Query: 108 FVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
++ AC+ + +D+ R H ++ K G+ ++ L+ + + G + +A +
Sbjct: 675 VTSIVHACACSSSLDKGRDVHSYVI--KNGMGSNLPVTNALINMYAKCGSVEEARLVFSK 732
Query: 167 MPM 169
+P+
Sbjct: 733 IPV 735
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 22/133 (16%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
E++ LF+++Q G+ G+ T +L LG ++ +H Y++K + + +L
Sbjct: 453 ESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLI 512
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
DV++ ++I + G LE F +M I GV+ D
Sbjct: 513 AAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLT 572
Query: 107 TFVGVLVACSHAG 119
T V VLVA ++ G
Sbjct: 573 TLVSVLVAWANIG 585
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 145/395 (36%), Positives = 214/395 (54%), Gaps = 50/395 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD-VGLGMA 66
E+ + FRE+QH G D + V + AC++L + VG +H +K +I + V + A
Sbjct: 328 EDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNA 387
Query: 67 L----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
L ++++L ++I A G ++L F M + + P+
Sbjct: 388 LVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPN 447
Query: 105 AITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
ITF+ VL AC H G V+E +FN+M E++ I P EHY C++ +LGRAG++ +AE +I
Sbjct: 448 TITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERII 507
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWK 224
+ MP LLGACR H N+E A +AA + L+L P N YV+LSN Y+S+ +W+
Sbjct: 508 ETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWE 567
Query: 225 KVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAG 260
+ ++ LM ER +KK PGC IE+D VH FV +AG
Sbjct: 568 EAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMKQAG 627
Query: 261 FVPNKSEVLF---DMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHT 317
+VP+ L +++ +EKE L H+EKLA+ FGL+S V I ++KNLR+C DCH
Sbjct: 628 YVPDIRWALVKDEEVEPDEKERRLLYHSEKLAVAFGLISTEEWVPILVVKNLRICGDCHN 687
Query: 318 ATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
A +IS + RE V D +RFH FK G CSC D+W
Sbjct: 688 AIKLISAITGREITVRDTHRFHCFKEGHCSCGDYW 722
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 28/186 (15%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EA+ LFRE+ +GL D TM S+L A T + L GM H ++K + +G L
Sbjct: 226 EAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLI 285
Query: 69 DVMTLTA-----------------LIVVLAMCGQGNK-------ALEYFYEMQIRGVKPD 104
D+ + A L++ M ++ + F EMQ G PD
Sbjct: 286 DLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPD 345
Query: 105 AITFVGVLVACSH--AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE 162
+FV V ACS+ + V +++ + S+ R S+ + LV + + G + A
Sbjct: 346 DCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNN--ALVAMYSKCGNVHDARR 403
Query: 163 LIKNMP 168
+ MP
Sbjct: 404 VFDTMP 409
>gi|413934702|gb|AFW69253.1| hypothetical protein ZEAMMB73_589560 [Zea mays]
Length = 664
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/400 (38%), Positives = 225/400 (56%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI----MKKN 56
Y +++ +AL F ++ G+ D+V++ + AC LGA++ W+ + +N
Sbjct: 265 YAQNAMPVKALEAFEQMAVAGMPIDEVSLTGAISACAQLGAVKRAAWVQEIAERNGLGRN 324
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ V GL GM K+V T +++IV LA G+ N + F +M
Sbjct: 325 VVVGSGLVDMYAKCGLIDEARKVFEGMHDKNVYTYSSMIVGLASHGRANDVIALFNDMVR 384
Query: 99 RG-VKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
R V+P+ +TF+GVL ACSHAG+V E +F M ++YGI PS +HY C+V +L R+G +
Sbjct: 385 RADVEPNHVTFIGVLTACSHAGMVKEGRYYFAQMKDRYGILPSADHYACMVDLLARSGLV 444
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A +L+K+M + V G LLGACRIH N E A+ AA+ L L P+ G+YV+LSN
Sbjct: 445 TEALDLVKSMTVEPHGGVWGALLGACRIHGNTEVAKIAAEHLFRLEPEGIGNYVLLSNTL 504
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIE-VDGVVHEFVK------------------ 258
+S+ +W +V ++R+LM R +KK P E DG VH+F
Sbjct: 505 ASAGEWDEVSKLRKLMRIRGLKKDPAVSWFEGRDGFVHQFFAGDNTHPSMHEIKKRLLEL 564
Query: 259 ------AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
AG+VP S V++++ EEEKE L H+EKLA++FGL++ IRI+KNLR+C
Sbjct: 565 REKLNLAGYVPILSSVVYNVSEEEKERLLMGHSEKLALSFGLLTLESRSSIRIVKNLRIC 624
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH ++SKV E +V D RFHHF++G CSC FW
Sbjct: 625 EDCHLFIRLVSKVEPIEILVRDNMRFHHFRDGECSCGGFW 664
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 67 LKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERIS 126
+KD++ TA++ A KALE F +M + G+ D ++ G + AC+ G V +R +
Sbjct: 252 VKDMVAWTAMVTGYAQNAMPVKALEAFEQMAVAGMPIDEVSLTGAISACAQLGAV-KRAA 310
Query: 127 HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
++E+ G+ ++ LV + + G I +A ++ + M
Sbjct: 311 WVQEIAERNGLGRNVVVGSGLVDMYAKCGLIDEARKVFEGM 351
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 145/397 (36%), Positives = 223/397 (56%), Gaps = 45/397 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK----- 55
+ ++ AL L ++Q G D V++VS+LLAC+ +G L++G +H YI+++
Sbjct: 282 FAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLHFDC 341
Query: 56 ----------------NIEVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ V ++ +D ++ A+I + G G +AL F +M+
Sbjct: 342 VSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRET 401
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
VKPD TF +L A SH+GLV++ F++M +Y I+PS +HY C+V +L RAGR+ +
Sbjct: 402 NVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEE 461
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A+ELI++M + LL C H E AA+++LEL PD+ G Y ++SN +++
Sbjct: 462 AQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFAT 521
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
+R+W +V +R++M + +KK PG ++EV+G +H F+
Sbjct: 522 ARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLMEDKSHHQYEEIMQVLGKLDYE 581
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
G+VP VL +++EE KE L H+E+LAI FGL++ PG + I KNLRVC DC
Sbjct: 582 MKAMGYVPKTEFVLHNLEEEVKERMLCNHSERLAIAFGLLNTGPGTRLLITKNLRVCGDC 641
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H AT ISK+ NRE VV D RFHHFK+G CSC D+W
Sbjct: 642 HEATKFISKIVNREIVVRDVKRFHHFKDGVCSCGDYW 678
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 22/141 (15%)
Query: 3 EDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVG 62
++ EA+ ++R++ K + GD V M+ L+ ACT LG ++G+ +H Y+++K+I +DV
Sbjct: 183 QNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVI 242
Query: 63 LGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG 100
+ +L K+V++ +ALI A G AL+ +MQ G
Sbjct: 243 VQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFG 302
Query: 101 VKPDAITFVGVLVACSHAGLV 121
KPD+++ V VL+ACS G +
Sbjct: 303 YKPDSVSLVSVLLACSQVGFL 323
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 57/141 (40%), Gaps = 22/141 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVG--MWLHPYIMKKNIE 58
Y A EAL L+ + +G+ D T +L ACT L G W +
Sbjct: 80 YSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDD 139
Query: 59 VDVGLG--------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V VG M +D++ T +I LA GQ +A++ + +M
Sbjct: 140 VFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHK 199
Query: 99 RGVKPDAITFVGVLVACSHAG 119
+ V+ D + +G++ AC+ G
Sbjct: 200 KRVEGDGVVMLGLIQACTTLG 220
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 223/398 (56%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +E++ L RE+ G+ + T+V+++ + + L G +H + + + +
Sbjct: 224 YAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSN 283
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL D V++ A+I AM G AL+ F +M+
Sbjct: 284 DKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMR- 342
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ +PD ITFVGVL ACS L+DE + +NLM YGI P+++HY C++ +LG G++
Sbjct: 343 KEDRPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLD 402
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI+NM + D V G LL +C+IH N+E AE A ++L+EL PD+ G+YVIL+N Y+
Sbjct: 403 EAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYA 462
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S KW+ V+++R++M ++ IKK C IEV V+ F+
Sbjct: 463 QSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEG 522
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+ P+ V D++E+EK + + H+E+LAI FGL+S PG + I KNLR+C D
Sbjct: 523 LMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICED 582
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ISK+ RE V D NR+H FK+G CSC D W
Sbjct: 583 CHVAIKFISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + A++L+ ++ GL D T+ +L AC+ L A+ G +H Y++K E D
Sbjct: 123 YAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERD 182
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+ +G AL D + A CG A F ++ +R DA+ + +L A + G
Sbjct: 183 LFVGAALID---------MYAKCGCVMDAGRVFDKIVVR----DAVLWNSMLAAYAQNGH 229
Query: 121 VDERISHFNLMSEKYGIRPS 140
DE IS M+ G+RP+
Sbjct: 230 PDESISLCREMAAN-GVRPT 248
>gi|359487598|ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Vitis vinifera]
Length = 603
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 226/402 (56%), Gaps = 50/402 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEAL ++ +++ + D T+VSLL +C H+GAL +G+ +H + ++ + +
Sbjct: 202 YCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVEN 261
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL +DV T ++IV + G+G++A+ +F M +
Sbjct: 262 IFVGNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLM 321
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+P++ITF+G+L CSH GLV E + +F++MS ++ ++P I+HYGC+V + GRAG++
Sbjct: 322 AGVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLK 381
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E+I++ P D + LLG+C+IH N+E E A + L++L G V+LS Y+
Sbjct: 382 EALEVIRSSPSQHDPVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYA 441
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF-VKAGFVPNKSEVLFDMDE--- 274
++ + V R+R+L+ R IK PG IEV VH F V P+ E+ ++E
Sbjct: 442 EAKDLQGVARMRKLIQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEVIH 501
Query: 275 ---------EEK---------------ETALNLHTEKLAITFGLVSPMPGVLIRIIKNLR 310
EE ET+ + H+EKLAI +GL G + I+KNLR
Sbjct: 502 RASLVGYAMEESSLVAAPESNTQEYCWETSTSYHSEKLAIAYGLARTPEGTSLLIVKNLR 561
Query: 311 VCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
VC DCH T +S ++RE +V DR RFHHFK G CSCK+FW
Sbjct: 562 VCRDCHNFTKFVSMAFDREIIVRDRVRFHHFKGGHCSCKEFW 603
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
M +D+++ ++I G +AL+ + +M+I V D T V +L +C+H G +
Sbjct: 187 MPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMG 246
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
+ E+ + +I L+ + + G +A A + +MP
Sbjct: 247 VQMHRFAGERRLVE-NIFVGNALIDMYAKCGSLASALSIFNSMP 289
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/387 (37%), Positives = 211/387 (54%), Gaps = 46/387 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEAL +F E+++ G+ D+ + L A +L LE G LH ++K E D+ + A
Sbjct: 684 EEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAA 743
Query: 68 KDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D+ ++ LI A G KA E F+EM G KPD
Sbjct: 744 MDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDH 803
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TFV +L AC+H GLVDE +++++ M+ ++G+ P IEH C++ +LGR+GR++ AE IK
Sbjct: 804 VTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIK 863
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP+ + LL ACRIH NLE A + A+ LLEL P + +YV+ SN ++S KW+
Sbjct: 864 EMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWED 923
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEF------------------------VKAGF 261
V+ +R+ M NIKK P C +++ VH F +AG+
Sbjct: 924 VENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGY 983
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ S L DMDEE+KE L H+E+LA+ FGL++ +RI KNLRVC DCH+
Sbjct: 984 VPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKF 1043
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSC 348
+S + R+ V+ D RFHHF G CSC
Sbjct: 1044 VSGIVGRKIVLRDPYRFHHFSGGKCSC 1070
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGA-LEVGMWLHPYIMKKNIEV 59
+ E+ EA+ ++ ++ KG+ + +TMVS+L AC+ L+ GM +H +I+ E
Sbjct: 575 HAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFES 634
Query: 60 D----------------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
D + G+ K +T A++ A G G +AL+ F EM+
Sbjct: 635 DDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMR 694
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV D +F G L A ++ +++E L+ K G + + + G+ G +
Sbjct: 695 NVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVI-KLGFESDLHVTNAAMDMYGKCGEM 753
Query: 158 AKAEELIKNMPMALDHFVLGG--LLGACRIHDNLEAAERAAQQLLELLP 204
+++K +P ++ L L+ A H + A ++L+L P
Sbjct: 754 ---HDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGP 799
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 28/192 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGAL-EVGMWLHPYIMKKNIEV 59
YV EEA+ LF ++ G+ + + SL+ AC+ G + + G +H +++K I
Sbjct: 170 YVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILG 229
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
DV +G AL +V++ T+L+V + G + L + M+
Sbjct: 230 DVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMR 289
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSE--KYGIRPSIEHYGCLVYILGRAG 155
GV + TF V +C GL+++++ + ++ +YG S+ L+ +
Sbjct: 290 QEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFS 346
Query: 156 RIAKAEELIKNM 167
+ +A + +M
Sbjct: 347 SVEEACYVFDHM 358
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 22/138 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTH---------LGALEVGMWLHPY 51
YV+D C + L + E+ G + VT S L AC++ + AL + H +
Sbjct: 474 YVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDF 533
Query: 52 IMKKNIEVDV--GLGMALK-----------DVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
++ N V + LGM ++ D +T ALI A + N+A++ + ++
Sbjct: 534 LIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIRE 593
Query: 99 RGVKPDAITFVGVLVACS 116
+G+ + IT V VL ACS
Sbjct: 594 KGIPANYITMVSVLGACS 611
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 218/398 (54%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EEA+ LF + + + D VT+ S +LA +G+LE+ W+ Y+ K N D
Sbjct: 331 YAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSD 390
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + +L KDV+ +A+I+ + GQG +A+ ++ M+
Sbjct: 391 IFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQ 450
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV P+ +TF+G+L AC+H+GLV E F+ M + + I P EHY C+V +LGRAG +
Sbjct: 451 AGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKD-FEIVPRNEHYSCVVDLLGRAGYLG 509
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A I +P+ V G LL AC+I+ + E AA +L L P N G YV LSN Y+
Sbjct: 510 EACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYA 569
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
SS W V +R LM E+ + K G +IE++G + F
Sbjct: 570 SSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLER 629
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ GFVP VL D++ EEKE L+ H+E++A+ +GL+S PG +RI KNLR C +
Sbjct: 630 RLKEVGFVPYTESVLHDLNYEEKEENLSFHSERIAVAYGLISTAPGTTLRITKNLRACVN 689
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A +ISK+ RE +V D NRFHHFK+G CSC D+W
Sbjct: 690 CHSAIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
Length = 615
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/398 (35%), Positives = 220/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ ++ +EALL F+ +Q +G+ D++T VS+L A T +GALE+G LH I+ ++
Sbjct: 218 FCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTS 277
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G M K+V++ A++ G+ +AL F M +
Sbjct: 278 IVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDL 337
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+P+ ITFV +L CSH+G + +SHF M + +GI P H+GCL+ +LGR+G++
Sbjct: 338 EGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLE 397
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AEELI+ MP+ D + LL AC H + + A RAA++ + P +Y++LSN Y+
Sbjct: 398 EAEELIQAMPVPADAVLWTSLLCACVTHKDEDRAARAAEEAFQREPRCAAAYIMLSNLYA 457
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ +KW + ++R+ M + ++K G IE+D VHEFV
Sbjct: 458 ALKKWDEAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFVAGDSIHPDKSRIFKTLQRLMS 517
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P++ V+ M+EEEK+ L H+EKLA+ FG+ S P + I+KNLRVC+D
Sbjct: 518 EMRIKGYEPDRKVVIHSMEEEEKDEVLFYHSEKLAVAFGIASTPPRTPLCIVKNLRVCSD 577
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A IS V R V D NRFHHF G CSC D+W
Sbjct: 578 CHSAIKFISGVEGRRITVRDSNRFHHFDRGECSCGDYW 615
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V+ EA+ LF + +G D+V ++ + +C AL G +H ++ D
Sbjct: 117 FVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSD 176
Query: 61 ----------------VGLGMAL------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G A+ K+V++ + +I ++AL +F MQ
Sbjct: 177 LVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQ 236
Query: 99 RGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G++ D IT+V VL A + G ++ + H ++ G+ SI LV + G+ G
Sbjct: 237 EGMELDRITYVSVLDAYTSVGALELGKALHVRIVYA--GLDTSIVVGNTLVNMYGKCGSP 294
Query: 158 AKAEELIKNM 167
A ++ +M
Sbjct: 295 DDARDVFDSM 304
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 73/186 (39%), Gaps = 28/186 (15%)
Query: 6 ACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI---------MKKN 56
A EA+ L + G TGD + L+ C ALE G +H ++ N
Sbjct: 24 AIREAVDLLEQSGAAGGTGD---LEQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSN 80
Query: 57 IEVD-------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
+ VD V M K+V + T L+ G+G +A++ F+ M G P
Sbjct: 81 LLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELP 140
Query: 104 DAITFVGVLVACSHA-GLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE 162
D + + + +C A L R H S G+ + ++ + G+ G I +A
Sbjct: 141 DRVALLKFIDSCGAAKALSQGREIHSAAAS--CGMDSDLVTANAIINMYGKCGSIGEAFA 198
Query: 163 LIKNMP 168
+ MP
Sbjct: 199 VFTRMP 204
>gi|296089864|emb|CBI39683.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 226/402 (56%), Gaps = 50/402 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEAL ++ +++ + D T+VSLL +C H+GAL +G+ +H + ++ + +
Sbjct: 184 YCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVEN 243
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL +DV T ++IV + G+G++A+ +F M +
Sbjct: 244 IFVGNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLM 303
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV+P++ITF+G+L CSH GLV E + +F++MS ++ ++P I+HYGC+V + GRAG++
Sbjct: 304 AGVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLK 363
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E+I++ P D + LLG+C+IH N+E E A + L++L G V+LS Y+
Sbjct: 364 EALEVIRSSPSQHDPVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYA 423
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF-VKAGFVPNKSEVLFDMDE--- 274
++ + V R+R+L+ R IK PG IEV VH F V P+ E+ ++E
Sbjct: 424 EAKDLQGVARMRKLIQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEVIH 483
Query: 275 ---------EEK---------------ETALNLHTEKLAITFGLVSPMPGVLIRIIKNLR 310
EE ET+ + H+EKLAI +GL G + I+KNLR
Sbjct: 484 RASLVGYAMEESSLVAAPESNTQEYCWETSTSYHSEKLAIAYGLARTPEGTSLLIVKNLR 543
Query: 311 VCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
VC DCH T +S ++RE +V DR RFHHFK G CSCK+FW
Sbjct: 544 VCRDCHNFTKFVSMAFDREIIVRDRVRFHHFKGGHCSCKEFW 585
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
M +D+++ ++I G +AL+ + +M+I V D T V +L +C+H G +
Sbjct: 169 MPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMG 228
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
+ E+ + +I L+ + + G +A A + +MP
Sbjct: 229 VQMHRFAGERRLVE-NIFVGNALIDMYAKCGSLASALSIFNSMP 271
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 216/398 (54%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEA+ LFRE+ K + D +TM S +LA +G+LE+ WL YI K D
Sbjct: 277 YANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDD 336
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L KDV+ + +I+ + G G +A+ + EM+
Sbjct: 337 TFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQ 396
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV P+ TF+G+L AC ++GLV E F+LM + +GI P +HY C+V +LGRAG +
Sbjct: 397 AGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRAGYLN 455
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I +MP+ V G LL AC+IH + E AA+QL L P N G YV LSN Y+
Sbjct: 456 QAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYA 515
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S+ W +V +R +M ++ + K G IE++G + F
Sbjct: 516 SAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEK 575
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VP+ VL D++ EE E L H+E+LA+ +G++S PG +RI KNLR C +
Sbjct: 576 RLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACIN 635
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A +ISK+ +RE ++ D RFHHFK+G CSC DFW
Sbjct: 636 CHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 673
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ EAL +F+E++ + D + +VS++ A T++ L G +H + K +E +
Sbjct: 176 YVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFE 235
Query: 61 VGLGMALK----------------------DVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ ++L +++ A+I A G G +A++ F EM
Sbjct: 236 PDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMIT 295
Query: 99 RGVKPDAITFVGVLVACSHAG 119
+ ++ D+IT ++A + G
Sbjct: 296 KNIRVDSITMRSAVLASAQVG 316
>gi|297792411|ref|XP_002864090.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297309925|gb|EFH40349.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 534
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/399 (37%), Positives = 211/399 (52%), Gaps = 50/399 (12%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
YV + EEAL + + +K + S L AC LG L W+H ++ IE
Sbjct: 139 YVRNVQYEEALKTLKNMLSFSDFKPNKFSFASSLAACARLGDLHHAKWVHSLMIDGGIEF 198
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ L AL DV A+I A G +A+ F EM+
Sbjct: 199 NAILSSALVDVYAKCGDIETSREVFCSVKRNDVSIWNAMITGFATHGLATEAIRVFSEME 258
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V PD+ITF+G+L ACSH GL++E +F LMS ++ I+P +EHYG +V +LGRAG++
Sbjct: 259 AEHVSPDSITFLGLLTACSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGQV 318
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A ELI++MP+ D + LL + R N E E A Q L + G YV+LSN Y
Sbjct: 319 KEAYELIESMPIEPDVVIWRSLLSSSRTFKNPELGEIAIQNLSKA---KSGDYVLLSNIY 375
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------VKA--------- 259
SS++KW+ +++RELM + I+K G +E GV+H F KA
Sbjct: 376 SSTKKWESAQKVRELMTKEGIRKAKGKSWVEFGGVIHRFKAGDTSHIETKAIYKVLEGLI 435
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
GFV + VL D+ EEEKE LN H+EKLA+ + ++ PG IRI KN+R+C+
Sbjct: 436 QKTKSEGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCS 495
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH +SK+ NR + DR RFH F++G CSCKD+W
Sbjct: 496 DCHNWIKAVSKLLNRVITMRDRIRFHRFEDGLCSCKDYW 534
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 212/388 (54%), Gaps = 48/388 (12%)
Query: 13 LFREVQHKGLT-GDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV------------ 59
LF E++ +G+ D + + S++ C +L LE+G +H ++ E
Sbjct: 224 LFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMY 283
Query: 60 ----------DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFV 109
D+ M KDV++ T++IV A G+ +AL + EM + +KP+ +TFV
Sbjct: 284 AKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFV 343
Query: 110 GVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPM 169
G+L ACSHAGLV F M+ Y I PS++HY CL+ +L R+G + +AE L+ +P
Sbjct: 344 GLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPF 403
Query: 170 ALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRI 229
D LL AC H+NLE R A ++L+L P++ +Y++LSN Y+ + W V ++
Sbjct: 404 KPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKV 463
Query: 230 RELMAERNIKKPPGCILIEV---DGVVH----------------------EFVKAGFVPN 264
R+LM+ ++K PG I+ V H E K G+VPN
Sbjct: 464 RKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPN 523
Query: 265 KSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISK 324
S VL+D++++EKE L H+E+LA+ +GL+ +PG +IRI+KNLR+C DCH IS
Sbjct: 524 TSFVLYDIEQQEKEKQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISD 583
Query: 325 VYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ RE +V D R+HHFK G CSC DFW
Sbjct: 584 IVKREIMVRDATRYHHFKEGKCSCNDFW 611
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEAL L+ E+ + ++VT V LL AC+H G + G L +++ D + +L
Sbjct: 321 EEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELF-----RSMTTDYSINPSL 375
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC 115
+ T L+ +L+ G ++A ++ KPD T+ +L AC
Sbjct: 376 QHY---TCLLDLLSRSGHLDEAENLLDKIPF---KPDEPTWASLLSAC 417
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/384 (36%), Positives = 213/384 (55%), Gaps = 47/384 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E AL L ++Q K T S+L AC +GALE G W+H +++K +++ +G L
Sbjct: 272 EHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTL 331
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
DV++ ++ A G G + L+ F +M G++P+
Sbjct: 332 LDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNE 391
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
I+F+ VL ACSH+GL+DE + +F LM +KY + P + HY V +LGR G + +AE I+
Sbjct: 392 ISFLCVLTACSHSGLLDEGLYYFELM-KKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIR 450
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP+ V G LLGACR+H N+E AA++ EL P + G ++LSN Y+S+ +W+
Sbjct: 451 EMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRD 510
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
V ++R++M E +KK P C +E++ VH FV + G+
Sbjct: 511 VAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISGKIKEIGY 570
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ S VL +D++E+E L H+EKLA+ F L++ G IRI KN+RVC DCH A
Sbjct: 571 VPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKF 630
Query: 322 ISKVYNRETVVMDRNRFHHFKNGS 345
+SKV +RE +V D NRFH F++GS
Sbjct: 631 VSKVVDREIIVRDTNRFHRFRDGS 654
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 26/209 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ +++ +ALLLF ++ G + T+ SLL A L+ G LH + +K +
Sbjct: 164 FSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSS 223
Query: 61 VGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL D+ ++ ALI A G+G AL ++MQ
Sbjct: 224 VYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQR 283
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+ +P T+ VL AC+ G +++ + H +++ K G++ L+ + +AG I
Sbjct: 284 KNFQPTHFTYSSVLSACASIGALEQGKWVHAHMI--KSGLKLIAFIGNTLLDMYAKAGSI 341
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIH 186
A+ + + + D +L C H
Sbjct: 342 DDAKRVFDRL-VKPDVVSWNTMLTGCAQH 369
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 71/176 (40%), Gaps = 26/176 (14%)
Query: 17 VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----------KNIEVDVGLG-- 64
+Q L D LL CT LG +E G +H +++ +NI V++
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 65 -----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLV 113
M KD++T TALI + + AL F +M G +P+ T +L
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLK 197
Query: 114 AC-SHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
A S GL + + + KYG + S+ LV + R G + A+ MP
Sbjct: 198 ASGSEHGL--DPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMP 251
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 216/398 (54%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEA+ LFRE+ K + D +TM S +LA +G+LE+ WL YI K D
Sbjct: 262 YANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDD 321
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L KDV+ + +I+ + G G +A+ + EM+
Sbjct: 322 TFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQ 381
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GV P+ TF+G+L AC ++GLV E F+LM + +GI P +HY C+V +LGRAG +
Sbjct: 382 AGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRAGYLN 440
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I +MP+ V G LL AC+IH + E AA+QL L P N G YV LSN Y+
Sbjct: 441 QAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYA 500
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S+ W +V +R +M ++ + K G IE++G + F
Sbjct: 501 SAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEK 560
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VP+ VL D++ EE E L H+E+LA+ +G++S PG +RI KNLR C +
Sbjct: 561 RLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACIN 620
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+A +ISK+ +RE ++ D RFHHFK+G CSC DFW
Sbjct: 621 CHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 658
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ EAL +F+E++ + D + +VS++ A T++ L G +H + K +E +
Sbjct: 161 YVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFE 220
Query: 61 VGLGMALK----------------------DVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ ++L +++ A+I A G G +A++ F EM
Sbjct: 221 PDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMIT 280
Query: 99 RGVKPDAITFVGVLVACSHAG 119
+ ++ D+IT ++A + G
Sbjct: 281 KNIRVDSITMRSAVLASAQVG 301
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/407 (36%), Positives = 219/407 (53%), Gaps = 55/407 (13%)
Query: 1 YVEDSACEEALLLFR---EVQHKG----LTGDKVTMVSLLLACTHLGALEVGMWLHPYIM 53
YV EA LF+ E++ G + D + V++L AC + ALE G +
Sbjct: 423 YVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAA 482
Query: 54 KKNIEVDVGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKAL 90
+ D +G A+ DV A+I V A GQ ++AL
Sbjct: 483 SCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEAL 542
Query: 91 EYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKY-GIRPSIEHYGCLVY 149
+ F+ M++ GV+PD+ +FV +L+ACSH GL D+ S+F M+ +Y + +I+H+GC+
Sbjct: 543 KLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVAD 602
Query: 150 ILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGS 209
+LGR GR+ +AEE ++ +P+ D LL ACR H +L+ A+ A +LL L P
Sbjct: 603 LLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATG 662
Query: 210 YVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------ 257
YV LSN Y+ +KW V ++R+ MAE+ +KK G IE+ +H+F
Sbjct: 663 YVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREI 722
Query: 258 ------------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRI 305
+ G+VP+ VL +DE+EKE L H+E+LAI GL+S G +R+
Sbjct: 723 REELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRV 782
Query: 306 IKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
KNLRVC+DCHTAT +ISK+ R+ VV D RFH FK+G CSC+D+W
Sbjct: 783 TKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 829
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 84/203 (41%), Gaps = 26/203 (12%)
Query: 16 EVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI-EVDVGLG---------- 64
+++ + + + T LL C AL G +H +K N+ ++ LG
Sbjct: 33 DLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHC 92
Query: 65 ------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVL 112
+ +++ + T L+ A+ GQ + L M+ GV+PDA+TF+ L
Sbjct: 93 DSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITAL 152
Query: 113 VACSHAGLVDERIS-HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMAL 171
+C + + I H ++ + I P + + L+ + + G ++ A+ + M
Sbjct: 153 GSCGDPESLRDGIRIHQMVVDSRLEIDPKVSN--ALLNMYKKCGSLSHAKRVFAKMERTR 210
Query: 172 DHFVLGGLLGACRIHDNLEAAER 194
+ + GA +H N+ A R
Sbjct: 211 NVISWSIMAGAHALHGNVWEALR 233
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 27/134 (20%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV------- 61
EAL FR + G+ K MV++L AC+ ++ G +H I E ++
Sbjct: 230 EALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVANAVM 289
Query: 62 -----------------GLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
+ AL+DV++ ++ +G A++ + MQ+R D
Sbjct: 290 TMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQLRA---D 346
Query: 105 AITFVGVLVACSHA 118
+T+V +L ACS A
Sbjct: 347 KVTYVSLLSACSSA 360
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/379 (37%), Positives = 210/379 (55%), Gaps = 46/379 (12%)
Query: 20 KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----KNIEVDVGL------------ 63
+ L D + ++ +L +C+H GAL+ G +H +K NI V +
Sbjct: 319 QNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLED 378
Query: 64 ------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSH 117
GM KDV+ A+I M G G A++ F +M+ G+ PD TFV VL ACSH
Sbjct: 379 AKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSH 438
Query: 118 AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLG 177
AG+V E + F M + P+++HY C++ ILGRAG++ A I NMP D V
Sbjct: 439 AGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYS 498
Query: 178 GLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERN 237
LLGACRIH N++ +Q++ E+ P++ G YV+LSN Y+ + W+ VK R + +
Sbjct: 499 TLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKR 558
Query: 238 IKKPPGCILIEVDGVVHEFV------------------------KAGFVPNKSEVLFDMD 273
+KK PG IE++ ++ F+ KAG+VPN + +L D+
Sbjct: 559 LKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVS 618
Query: 274 EEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVM 333
++ K+ L H+EK+AI FGL+ PG +IRI KNLR CNDCH+A+ +SKV+ R V+
Sbjct: 619 DDMKKDILYHHSEKMAIAFGLMRTKPGTIIRITKNLRTCNDCHSASKFVSKVFGRVLVIK 678
Query: 334 DRNRFHHFKNGSCSCKDFW 352
D NRFH F++G CSC+D+W
Sbjct: 679 DANRFHVFQDGVCSCRDYW 697
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 23/146 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEA+ LF ++ KGL D T++SL+ A +G L+VG +H +I++ E D
Sbjct: 198 YSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYEND 257
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM-Q 97
+ AL KDV T ++ + ++A+++F +M
Sbjct: 258 KHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLG 317
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDE 123
I+ +K D+I +G+L +CSH+G + +
Sbjct: 318 IQNLKLDSIVLMGILSSCSHSGALQQ 343
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 103/242 (42%), Gaps = 35/242 (14%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EA+ +FRE+ + VT+ S+L A +LG + + +H + ++ E
Sbjct: 105 EAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFE---------G 155
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHF 128
+V TAL+ + + G A + F M R V +++ ++ S G +E I F
Sbjct: 156 NVFVETALVDMYSKFGCMGVARQLFESMSERNV----VSWNAIVSGYSDHGFSEEAIDLF 211
Query: 129 NLMSEK------YGIR---PSIEHYGCLVYILGRAGRIAK-AEELIKNMPMALDHFVLGG 178
NLM K Y I P+ GCL G G I + E K++ AL +
Sbjct: 212 NLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVS- 270
Query: 179 LLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK-VKRIRELMAERN 237
H+ ++ A R E+ + ++ ++ +SS R W + +K +++ +N
Sbjct: 271 -------HNCVDDAHRV---FSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQN 320
Query: 238 IK 239
+K
Sbjct: 321 LK 322
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 212/388 (54%), Gaps = 48/388 (12%)
Query: 13 LFREVQHKGLT-GDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV------------ 59
LF E++ +G+ D + + S++ C +L LE+G +H ++ E
Sbjct: 224 LFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMY 283
Query: 60 ----------DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFV 109
D+ M KDV++ T++IV A G+ +AL + EM + +KP+ +TFV
Sbjct: 284 AKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFV 343
Query: 110 GVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPM 169
G+L ACSHAGLV F M+ Y I PS++HY CL+ +L R+G + +AE L+ +P
Sbjct: 344 GLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPF 403
Query: 170 ALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRI 229
D LL AC H+NLE R A ++L+L P++ +Y++LSN Y+ + W V ++
Sbjct: 404 KPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKV 463
Query: 230 RELMAERNIKKPPGCILIEV---DGVVH----------------------EFVKAGFVPN 264
R+LM+ ++K PG I+ V H E K G+VPN
Sbjct: 464 RKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPN 523
Query: 265 KSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISK 324
S VL+D++++EKE L H+E+LA+ +GL+ +PG +IRI+KNLR+C DCH IS
Sbjct: 524 TSFVLYDIEQQEKEKQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISD 583
Query: 325 VYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ RE +V D R+HHFK G CSC DFW
Sbjct: 584 IVKREIMVRDATRYHHFKEGKCSCNDFW 611
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEAL L+ E+ + ++VT V LL AC+H G + G L +++ D + +L
Sbjct: 321 EEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELF-----RSMTTDYSINPSL 375
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC 115
+ T L+ +L+ G ++A ++ KPD T+ +L AC
Sbjct: 376 QHY---TCLLDLLSRSGHLDEAENLLDKIPF---KPDEPTWASLLSAC 417
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 145/392 (36%), Positives = 221/392 (56%), Gaps = 40/392 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWL-----------H 49
Y ++ + L L+ +++ G+ D T+VS+L +C HLGA ++G + +
Sbjct: 232 YSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPN 291
Query: 50 PYIMKKNIEVDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
++ +I + G M +K +++ TA+I M G G L F +M
Sbjct: 292 VFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIK 351
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
RG++PD FV VL ACSH+GL D+ + F M +Y + P EHY CLV +LGRAGR+
Sbjct: 352 RGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLD 411
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E I++MP+ D V G LLGAC+IH N++ AE A +++E P+N G YV++SN YS
Sbjct: 412 EAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYS 471
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFDMDEEEKE 278
S+ + + RIR +M ER +K PG +E G VH F+ ++E + M +E +
Sbjct: 472 DSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELET 531
Query: 279 TALNL------------------HTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATN 320
+ + L H+E+LAI FG+++ +PG I +IKNLRVC DCH
Sbjct: 532 SVMELAGNMDCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLK 591
Query: 321 IISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+SK+ +R+ VV D +RFH+FK+G CSCKD+W
Sbjct: 592 QVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 25/192 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y +S +A +FR ++ G++ D VTM+ L+ CT L +G LH +K ++ +
Sbjct: 131 YTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSE 190
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + M +K ++T A+I + G LE + +M+
Sbjct: 191 VAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKS 250
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISH-FNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV PD T V VL +C+H G ++I H + E G P++ + + R G +
Sbjct: 251 SGVCPDPFTLVSVLSSCAHLGA--KKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNL 308
Query: 158 AKAEELIKNMPM 169
AKA + MP+
Sbjct: 309 AKARAVFDIMPV 320
>gi|224122234|ref|XP_002318784.1| predicted protein [Populus trichocarpa]
gi|222859457|gb|EEE97004.1| predicted protein [Populus trichocarpa]
Length = 511
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 212/398 (53%), Gaps = 49/398 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV + EEAL LFR + + DK T S++ C LGAL+ W+H +++K IE++
Sbjct: 117 YVRKARFEEALRLFRFMNKSNVEPDKYTFASVINGCAKLGALKHAQWVHELLIEKRIELN 176
Query: 61 VGLGMALKDVMT----------------------LTALIVVLAMCGQGNKALEYFYEMQI 98
L AL D+ + A+I LA+ G A++ F +M++
Sbjct: 177 FILSSALIDMYSKCGKIQTAKEIFDGVQRNNVCIWNAMISGLAVHGLALDAIKVFTKMEV 236
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V PDAITF+G+L ACSH GLV E +F+LM +Y ++P IEHYG +V +LGRAG +
Sbjct: 237 ENVLPDAITFLGILTACSHCGLVKEGRKYFDLMRSRYSVQPHIEHYGAMVDLLGRAGLLE 296
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +IK+MPM D + LLGACR + E E A + L G YV+LSN Y
Sbjct: 297 EAFAMIKSMPMEPDVVIWRALLGACRTYKKPELGEAAMANISRL---RSGDYVLLSNIYC 353
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK-------------------- 258
S ++W + + E+M ++ + K G E G +H F
Sbjct: 354 SQKRWDTAQGVWEMMKKKGVHKVRGKSCFEWAGFLHPFKAGDRSHPETEAIYKMLEGLIQ 413
Query: 259 ----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VP V D+ EEEKE L H+EKLA+ +G++ G +RI KNLR+C D
Sbjct: 414 RTKLAGYVPTTDLVTMDVSEEEKEGNLYHHSEKLALAYGILKTTSGAEVRISKNLRICYD 473
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+ I+S++ +R +V DR RFH F+NG CSC D+W
Sbjct: 474 CHSWIKIVSRLLSRVIIVRDRIRFHRFENGLCSCGDYW 511
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/398 (35%), Positives = 218/398 (54%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + CE+AL +F ++ L T S + A ++ ++ G +H I+K+ + D
Sbjct: 592 FAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSD 651
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL K+ ++ A+I + G GN+A+ F +M+
Sbjct: 652 IEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQ 711
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G P+ +TFVGVL ACSH GLV + + +F MS+++G+ P HY C+V ++ RAG ++
Sbjct: 712 VGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLS 771
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I+ MP+ D + LL AC +H N+E E AAQ LLEL P++ +YV+LSN Y+
Sbjct: 772 RARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYA 831
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
S KW + R++M R +KK PG IEV VH F
Sbjct: 832 VSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNK 891
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G+ ++ +L D+++E+K+ + +H+EKLAITFGL+S V I ++KNLRVC D
Sbjct: 892 KAAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHVMKNLRVCKD 951
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH+ +SK+ NR +V D RFHHF+ G CSCKD+W
Sbjct: 952 CHSWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 82/175 (46%), Gaps = 25/175 (14%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
E+ +FR++Q KGL ++ T S+L CT +GAL++G +H ++K + +V + L
Sbjct: 398 ESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLI 457
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
DV++ TALI A +AL++F EM RG++ D I
Sbjct: 458 DMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNI 517
Query: 107 TFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA 160
F + AC+ +++ R H Y SI + LV + R GRI +A
Sbjct: 518 GFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGN--ALVSLYARCGRIKEA 570
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 27/182 (14%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKD 69
AL LF +++ L D VT+ SLL AC GAL G LH Y++K I D+ + AL D
Sbjct: 298 ALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLD 357
Query: 70 V------------MTLTA----------LIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
+ M LTA ++V +++ F +MQI+G+ P+ T
Sbjct: 358 LYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFT 417
Query: 108 FVGVLVACSHAGLVD--ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+ +L C+ G +D E+I H ++ K G + ++ L+ + + G++ A +++
Sbjct: 418 YPSILRTCTSVGALDLGEQI-HTQVI--KTGFQFNVYVCSVLIDMYAKHGKLDTAHVILR 474
Query: 166 NM 167
+
Sbjct: 475 TL 476
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 22/134 (16%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEA+ LF E+ G+ S+L CT + +VG LH + K ++ + AL
Sbjct: 195 EEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNAL 254
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
KD ++ +LI LA G + ALE F +M+ +KPD
Sbjct: 255 VTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDC 314
Query: 106 ITFVGVLVACSHAG 119
+T +L AC+ G
Sbjct: 315 VTVASLLSACASNG 328
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 70/190 (36%), Gaps = 23/190 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + EAL F+E+ ++G+ D + S + AC + AL G +H D
Sbjct: 491 YAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSED 550
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL KD ++ LI A G AL+ F +M
Sbjct: 551 LSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNR 610
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
++ TF + A ++ + + + M K G IE L+ + G I
Sbjct: 611 AKLEASFFTFGSAVSAAANIANIKQG-KQIHAMIIKRGFDSDIEVSNALITFYAKCGSIE 669
Query: 159 KAEELIKNMP 168
A MP
Sbjct: 670 DARREFCEMP 679
>gi|302780141|ref|XP_002971845.1| hypothetical protein SELMODRAFT_96499 [Selaginella moellendorffii]
gi|300160144|gb|EFJ26762.1| hypothetical protein SELMODRAFT_96499 [Selaginella moellendorffii]
Length = 383
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 147/380 (38%), Positives = 210/380 (55%), Gaps = 47/380 (12%)
Query: 20 KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI-EVDVGLGMAL----------- 67
+G+ D VT SLL AC++L +L G LH I + + E DV L ++
Sbjct: 4 QGIHADTVTYASLLDACSNLASLSQGRKLHARIAELGLLEADVVLQTSILTMYSKCGRLG 63
Query: 68 -----------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACS 116
K+++ +A+I+ A G + AL+ F++M+ G K TFV VL ACS
Sbjct: 64 EARGIFDRIGEKNIVAWSAIIIAYAQNGDCSTALKLFWKMEQAGQKASETTFVSVLYACS 123
Query: 117 HAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVL 176
HAGLVD+ +F M + + P HYGC+V +LGRAGR+A AEELI+ M +
Sbjct: 124 HAGLVDDAYYYFTTMMSERKLEPLPGHYGCIVDLLGRAGRLADAEELIQRMKAPHSGVLW 183
Query: 177 GGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAER 236
LLGAC+ H ++ AERAA+++ EL P + YV+LSN YS + +W +R+ M
Sbjct: 184 TTLLGACKTHGDMMLAERAAERIRELDPGSATPYVLLSNVYSEAGRWDLAASVRKRMDNM 243
Query: 237 NIKKPPGCILIEVDGVVHEFV------------------------KAGFVPNKSEVLFDM 272
+KKP G +EV G +HEFV +AG+ +KS L +
Sbjct: 244 KVKKPAGKSWVEVRGKLHEFVAGDQSHPKIGEIVLELKRLLALIKEAGYAADKSATLHNA 303
Query: 273 DEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVV 332
+EEEKE L H+EKLAI GL+ G ++++KNLRVC+DCH A ISKV +R+ V+
Sbjct: 304 EEEEKEGLLYYHSEKLAIVMGLLHSPRGEPVQVVKNLRVCSDCHAAAKFISKVVDRQIVL 363
Query: 333 MDRNRFHHFKNGSCSCKDFW 352
D +FHHF++G CSC D+W
Sbjct: 364 RDTKQFHHFEHGRCSCGDYW 383
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/407 (36%), Positives = 219/407 (53%), Gaps = 55/407 (13%)
Query: 1 YVEDSACEEALLLFR---EVQHKG----LTGDKVTMVSLLLACTHLGALEVGMWLHPYIM 53
YV EA LF+ E++ G + D + V++L AC + ALE G +
Sbjct: 336 YVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAA 395
Query: 54 KKNIEVDVGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKAL 90
+ D +G A+ DV A+I V A GQ ++AL
Sbjct: 396 SCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEAL 455
Query: 91 EYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKY-GIRPSIEHYGCLVY 149
+ F+ M++ GV+PD+ +FV +L+ACSH GL D+ S+F M+ +Y + +I+H+GC+
Sbjct: 456 KLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVAD 515
Query: 150 ILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGS 209
+LGR GR+ +AEE ++ +P+ D LL ACR H +L+ A+ A +LL L P
Sbjct: 516 LLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATG 575
Query: 210 YVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------ 257
YV LSN Y+ +KW V ++R+ MAE+ +KK G IE+ +H+F
Sbjct: 576 YVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREI 635
Query: 258 ------------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRI 305
+ G+VP+ VL +DE+EKE L H+E+LAI GL+S G +R+
Sbjct: 636 REELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRV 695
Query: 306 IKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
KNLRVC+DCHTAT +ISK+ R+ VV D RFH FK+G CSC+D+W
Sbjct: 696 TKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 742
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 101/237 (42%), Gaps = 27/237 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+E L ++ G+ D VT ++ L +C +L G+ +H ++ +E+D + AL
Sbjct: 40 KETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNAL 99
Query: 68 -----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
++V++ + + A+ G +AL +F M + G+K
Sbjct: 100 LNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKAT 159
Query: 105 AITFVGVLVACSHAGLV-DERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
V +L ACS LV D R+ H + G + ++ + GR G + +A ++
Sbjct: 160 KSAMVTILSACSSPALVQDGRMIHSCIALS--GFESELLVANAVMTMYGRCGAVEEARKV 217
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSS 220
M AL V ++ + +H++ Q ++L PD +YV L + SS+
Sbjct: 218 FDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRMQLRPDK-VTYVSLLSACSSA 273
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERIS- 126
+++ + T L+ A+ GQ + L M+ GV+PDA+TF+ L +C + + I
Sbjct: 21 RNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRI 80
Query: 127 HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIH 186
H ++ + I P + + L+ + + G ++ A+ + M + + GA +H
Sbjct: 81 HQMVVDSRLEIDPKVSN--ALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALH 138
Query: 187 DNLEAAER 194
N+ A R
Sbjct: 139 GNVWEALR 146
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 146/400 (36%), Positives = 214/400 (53%), Gaps = 49/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ EE L LF +++ + D+ T SLL A + +L +G LH +I+K +
Sbjct: 387 YVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSN 446
Query: 61 VGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
V G AL DV ++ A+I A G+ L+ F EM +
Sbjct: 447 VFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVL 506
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD+++F+GVL ACSH+GLV+E + HFN M++ Y + P EHY +V +L R+GR
Sbjct: 507 SGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFN 566
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQL--LELLPDNGGSYVILSNR 216
+AE+L+ MP+ D + +L ACRIH N E A RAA QL +E L D YV +SN
Sbjct: 567 EAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRD-AAPYVNMSNI 625
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+++ +W+ V ++ + M +R +KK P +E+ H F
Sbjct: 626 YAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDML 685
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+ G+ P+ S L + DE+ K +L H+E+LAI F L+S G I ++KNLR C
Sbjct: 686 TKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRAC 745
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A +ISK+ RE V D RFHHF++G CSC DFW
Sbjct: 746 IDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 785
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 109/266 (40%), Gaps = 25/266 (9%)
Query: 38 HLGALEVGMWLHPYIMKKNIEVDVGL--GMALKDVMTLTALIVVLAMCGQGNKALEYFYE 95
H + M + Y+ N+ L GM + +T T LI + Q +A E F +
Sbjct: 75 HKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQ 134
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
MQ G +PD +TFV +L C+ + ++ I+ K G + LV ++
Sbjct: 135 MQRCGTEPDYVTFVTLLSGCNGHEMGNQ-ITQVQTQIIKLGYDSRLIVGNTLVDSYCKSN 193
Query: 156 RIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSN 215
R+ A +L K MP +D F +L A D++ ++ +++ N V +SN
Sbjct: 194 RLDLACQLFKEMP-EIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKT---NFVWNVFVSN 249
Query: 216 R----YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPN-KSEVLF 270
YS K V R+L E + E DGV + + +G+ + K + F
Sbjct: 250 ALLDFYS---KHDSVIDARKLFDE----------MPEQDGVSYNVIISGYAWDGKHKYAF 296
Query: 271 DMDEEEKETALNLHTEKLAITFGLVS 296
D+ E + TA + A + S
Sbjct: 297 DLFRELQFTAFDRKQFPFATMLSIAS 322
>gi|357124741|ref|XP_003564056.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Brachypodium distachyon]
Length = 594
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 143/387 (36%), Positives = 217/387 (56%), Gaps = 54/387 (13%)
Query: 14 FREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKD---- 69
FRE+ + ++VT+V+ L AC +G+L+ G+++H + K + +V + AL D
Sbjct: 214 FRELPPRE-EPNEVTIVAALSACAQIGSLQDGLYVHEFARKIGVNGNVRVCNALIDMYSK 272
Query: 70 --------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFV 109
+++ I ++M G G AL F EM ++PD +T++
Sbjct: 273 CGSLDLALEVFHSIKREDRTLVSYNTAIQAVSMHGHGGDALRLFDEMPTF-IEPDEVTYI 331
Query: 110 GVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPM 169
VL C+HAGLVD+ + F+ M + P+++HYG +V +LGRAGR+A+A + I +MP
Sbjct: 332 AVLCGCNHAGLVDDGLRVFHSMR----VLPNVKHYGAVVDLLGRAGRLAEAYDTIVSMPF 387
Query: 170 ALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRI 229
D + LLGA + H ++E AE AA +L EL + G YV+LSN Y+S +W V+R+
Sbjct: 388 PADIVLWQTLLGAAKTHGDVELAELAATKLDELGSNVDGDYVLLSNVYASKARWADVRRV 447
Query: 230 RELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GFVPNK 265
R+ M +++K PG E+ GV+H+F+ G+ P
Sbjct: 448 RDTMRSNDVRKVPGFSYTEISGVMHKFINGDKEHPRWQEIYRALEEIVSRIGELGYEPET 507
Query: 266 SEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKV 325
S VL D+ EEEK+ AL+ H+EKLAI FGL++ PG +R+IKNLR C DCH +ISK
Sbjct: 508 SNVLHDIGEEEKQYALSYHSEKLAIAFGLIATPPGETLRVIKNLRTCGDCHVVAKLISKA 567
Query: 326 YNRETVVMDRNRFHHFKNGSCSCKDFW 352
Y R ++ DR RFH F++G CSCKD+W
Sbjct: 568 YGRVIIIRDRARFHQFEDGQCSCKDYW 594
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 143/394 (36%), Positives = 210/394 (53%), Gaps = 50/394 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI---EVDVGLG- 64
EAL FR++Q G D + V + AC++L + G H MK I ++ V
Sbjct: 327 EALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNAL 386
Query: 65 -------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
M + +TL ++I A G G ++L F +M + P +
Sbjct: 387 VTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTS 446
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
IT V +L AC+H G V+E +FN+M + +GI P EHY C++ +LGRAG++++AE LI
Sbjct: 447 ITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLID 506
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP + LLGACR + N+E AE+AA Q L+L P N Y++L++ YS++RKW++
Sbjct: 507 TMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAARKWEE 566
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
RIR+LM +R I+K PGC IE++ VH FV +AG+
Sbjct: 567 AARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEIHMYLDEMFVKMKRAGY 626
Query: 262 VPNKSEVLFDMD---EEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTA 318
VP+ D E+EKE L H+EKLA+ FGL+ G + ++KNLR+C DCH A
Sbjct: 627 VPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLLFTKHGEPLLVVKNLRICGDCHNA 686
Query: 319 TNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+S + R+ V D RFH F++G CSC D+W
Sbjct: 687 IKFMSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 22/138 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLAC-THLG------ALEVGMWLHPYIM 53
Y + AL LF E++ GL D T ++ AC H+G +L Y+
Sbjct: 115 YADRGDTLSALSLFGEMREMGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSYVS 174
Query: 54 KKNI------------EVDV---GLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
KN E ++ G+G ++D ++ ++IV +G KAL + +M
Sbjct: 175 VKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVH 234
Query: 99 RGVKPDAITFVGVLVACS 116
RG + D T VL S
Sbjct: 235 RGFEIDMFTLASVLTTFS 252
>gi|357111099|ref|XP_003557352.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 685
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 144/376 (38%), Positives = 203/376 (53%), Gaps = 38/376 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ EEA FR + +G+ + T+ S + AC + G +E G I + +
Sbjct: 324 YVQNGREEEAFEFFRSMLREGVAAHQFTLTSAIAACANAGMVEQGR-----IFDRACAKN 378
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
V L T+++ A G+G A+E F M + P+ IT VGVL ACSH L
Sbjct: 379 VAL---------WTSMLCSYASHGKGRMAIELFNRMTAEKITPNEITLVGVLSACSHGRL 429
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLL 180
V+E F LM ++YGI PSIEHY C+V + GRAG + KA IK + + V LL
Sbjct: 430 VNEGDHFFKLMQDEYGIVPSIEHYNCMVDLYGRAGMLYKAHNFIKENNIKHEAIVWKTLL 489
Query: 181 GACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKK 240
ACR+H ++E A+ A++ L++L + GSYV+LSN Y++ KW ++R M ER + K
Sbjct: 490 SACRLHKHMEYAKLASENLIQLEECDAGSYVMLSNVYATHSKWLDTSKLRSSMRERRVWK 549
Query: 241 PPGCILIEVDGVVHEFVKA------------------------GFVPNKSEVLFDMDEEE 276
PG I + ++H FV G+ V D++EE+
Sbjct: 550 QPGRSWIHLKNIMHTFVAGDTAHPRSAEIYAYLEKLMERLKDLGYTSRTDLVAHDVEEEQ 609
Query: 277 KETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRN 336
+ETAL H+EKLAI FG++S G +RI KNLRVC DCH A +S+ +RE VV D
Sbjct: 610 RETALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCVDCHEAIKYVSQATDREIVVRDLY 669
Query: 337 RFHHFKNGSCSCKDFW 352
RFHHFK+ CSC+DFW
Sbjct: 670 RFHHFKDAKCSCEDFW 685
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 146/400 (36%), Positives = 214/400 (53%), Gaps = 49/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ EE L LF +++ + D+ T SLL A + +L +G LH +I+K +
Sbjct: 427 YVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSN 486
Query: 61 VGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
V G AL DV ++ A+I A G+ L+ F EM +
Sbjct: 487 VFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVL 546
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD+++F+GVL ACSH+GLV+E + HFN M++ Y + P EHY +V +L R+GR
Sbjct: 547 SGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFN 606
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQL--LELLPDNGGSYVILSNR 216
+AE+L+ MP+ D + +L ACRIH N E A RAA QL +E L D YV +SN
Sbjct: 607 EAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRD-AAPYVNMSNI 665
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+++ +W+ V ++ + M +R +KK P +E+ H F
Sbjct: 666 YAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDML 725
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+ G+ P+ S L + DE+ K +L H+E+LAI F L+S G I ++KNLR C
Sbjct: 726 TKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRAC 785
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A +ISK+ RE V D RFHHF++G CSC DFW
Sbjct: 786 IDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 825
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 3/133 (2%)
Query: 38 HLGALEVGMWLHPYIMKKNIEVDVGL--GMALKDVMTLTALIVVLAMCGQGNKALEYFYE 95
H + M + Y+ N+ L GM + +T T LI + Q +A E F +
Sbjct: 80 HKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQ 139
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
MQ G +PD +TFV +L C+ + ++ I+ K G + LV ++
Sbjct: 140 MQRCGTEPDYVTFVTLLSGCNGHEMGNQ-ITQVQTQIIKLGYDSRLIVGNTLVDSYCKSN 198
Query: 156 RIAKAEELIKNMP 168
R+ A +L K MP
Sbjct: 199 RLDLACQLFKEMP 211
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/399 (34%), Positives = 222/399 (55%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTH-LGALEVGMWLHPYIMKKNIEV 59
Y + EEA +F ++ +G+ ++ T S++ ACT ++E G H Y +K +
Sbjct: 478 YAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNN 537
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ + +L +D+++ ++I A GQ KALE F EMQ
Sbjct: 538 ALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQ 597
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
R ++ DAITF+GV+ AC+HAGLV + ++FN+M + I P++EHY C++ + RAG +
Sbjct: 598 KRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGML 657
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA ++I MP V +L A R+H N+E + AA++++ L P + +YV+LSN Y
Sbjct: 658 GKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIY 717
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
+++ W + +R+LM +R +KK PG IEV + F+
Sbjct: 718 AAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELN 777
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+ P+ + V D+++E+KET L+ H+E+LAI FGL++ +P + ++I+KNLRVC
Sbjct: 778 TRLRDVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFGLIATLPEIPLQIVKNLRVCG 837
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+ ++S V R VV D NRFHHFK G CSC D+W
Sbjct: 838 DCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 82/187 (43%), Gaps = 26/187 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+++ ++A+ LF ++ +G+ + T ++L + E+ H ++K N E
Sbjct: 381 YLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFISEI----HAEVIKTNYEKS 436
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL KDV+ +A++ A G+ +A + F+++
Sbjct: 437 SSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTR 496
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KP+ TF ++ AC+ E+ F+ + K + ++ LV + + G I
Sbjct: 497 EGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIE 556
Query: 159 KAEELIK 165
A E+ K
Sbjct: 557 SAHEIFK 563
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 22/126 (17%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD------------ 60
LF +Q +G D T+ +++ A + GA+ +GM +H ++K E +
Sbjct: 190 LFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLS 249
Query: 61 ----------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVG 110
V M KD ++ ++I + GQ +A E F MQ+ G KP TF
Sbjct: 250 KSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFAS 309
Query: 111 VLVACS 116
V+ +C+
Sbjct: 310 VIKSCA 315
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 85/223 (38%), Gaps = 32/223 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACT-----------HLGALEVGMWLH 49
Y +EAL LF + GL+ D TM +L C H ++ G+ H
Sbjct: 77 YSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHH 136
Query: 50 PYIMKKNIEVDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +++ G M +DV++ +L+ + ++ E F MQ+
Sbjct: 137 LSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQV 196
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G +PD T V+ A ++ G V + + + K G L+ +L ++G +
Sbjct: 197 EGYRPDYYTVSTVIAALANQGAVAIGM-QIHALVVKLGFETERLVCNSLISMLSKSGMLR 255
Query: 159 KAEELIKNM---------PMALDHFVLGGLLGACRIHDNLEAA 192
A + NM M H + G L A +N++ A
Sbjct: 256 DARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLA 298
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 146/399 (36%), Positives = 220/399 (55%), Gaps = 48/399 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLH---------PY 51
Y ++ EEA+ +F E+Q G+ D T+ S++ +C +L +LE G H Y
Sbjct: 348 YGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHY 407
Query: 52 IMKKNIEVDVGLG--------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
I N V + G M+ D ++ TAL+ A G+ + ++ F +M
Sbjct: 408 ITVSNALVTL-YGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKML 466
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+GVKPD +TF+GVL ACS AG V++ S+F+ M + +GI P +HY C++ + R+G++
Sbjct: 467 AKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKL 526
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+AEE IK MPM D G LL ACR+ ++E + AA+ LLE+ P N SYV+L + +
Sbjct: 527 KEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMH 586
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF--------------------- 256
++ +W +V ++R M +R +KK PGC I+ VH F
Sbjct: 587 AAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLN 646
Query: 257 ---VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
++ G+ P+ S VL D+ + +K ++ H+EKLAI FGL+ + IRI+KNLRVC
Sbjct: 647 SKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCV 706
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH AT ISK+ R+ +V D RFH F +G CSC DFW
Sbjct: 707 DCHNATKFISKITGRDILVRDAVRFHKFSDGVCSCGDFW 745
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 125/306 (40%), Gaps = 62/306 (20%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ ++ EAL +FR ++ +G+ D+ T S+L AC L ALE G +H YI++ + +
Sbjct: 247 FTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDN 306
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL K++++ TALIV G +A+ F EMQ
Sbjct: 307 VFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQR 366
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD T V+ +C++ ++E + F+ ++ G+ I LV + G+ G I
Sbjct: 367 DGIDPDDYTLGSVISSCANLASLEEG-AQFHCLALVSGLMHYITVSNALVTLYGKCGSIE 425
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A L M HD + S+ L + Y+
Sbjct: 426 DAHRLFDEMS----------------FHDQV-------------------SWTALVSGYA 450
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFDMDEEEKE 278
+ K+ + E M + + KP G I GV+ +AGFV M ++
Sbjct: 451 QFGRAKETIDLFEKMLAKGV-KPDGVTFI---GVLSACSRAGFVEKGRSYFHSMQKDHGI 506
Query: 279 TALNLH 284
++ H
Sbjct: 507 VPIDDH 512
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 94/219 (42%), Gaps = 26/219 (11%)
Query: 26 KVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKDVMTLTALIVVLAMCGQ 85
++TM ++++A + LG +G H I++ + +G L D+ +L+ G
Sbjct: 140 RITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLV------GD 193
Query: 86 GNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYG 145
+A F E+ + V G+L +V+E F +M+++ I +
Sbjct: 194 AKRA---FDEVDSKNVVMYNTMITGLL----RCKMVEEARRLFEVMTDRDSIT-----WT 241
Query: 146 CLVYILGRAGRIAKAEELIKNM---PMALDHFVLGGLLGACRIHDNLEAAERAAQQLLEL 202
+V + G ++A E+ + M +A+D + G +L AC LE ++ ++
Sbjct: 242 TMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRT 301
Query: 203 LPDNG---GSYVILSNRYSSSRKWKKVKRIRELMAERNI 238
D+ GS ++ + YS R K + + M +NI
Sbjct: 302 RYDDNVFVGSALV--DMYSKCRSIKLAETVFRRMTCKNI 338
>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 852
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 206/377 (54%), Gaps = 39/377 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ + EE+L F +++ G++ D+ + S+L AC L LE G +H +K
Sbjct: 490 YTQNGSHEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIK------ 543
Query: 61 VGLGMALKDVMTLT-ALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
+ L+ +++ +L+ + A CG + A F M +R D IT+ ++V + G
Sbjct: 544 ----LGLRSSLSVNNSLVTMYAKCGCLDDADAIFVSMHVR----DVITWTALIVGYARNG 595
Query: 120 LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGL 179
+ + +F M + YGI P EHY C++ + GR G++ +A+E++ M + D V L
Sbjct: 596 KGRDSLKYFQQMKKIYGIEPGPEHYACMIDLFGRLGKLDEAKEILNQMDVKPDATVWKAL 655
Query: 180 LGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIK 239
L ACR+H NLE ERAA L EL P N YV+LSN Y ++RKW +IR LM + I
Sbjct: 656 LAACRVHGNLELGERAATNLFELEPMNAMPYVMLSNMYLAARKWDDAAKIRRLMKSKGIT 715
Query: 240 KPPGCILIEVDGVVHEFV------------------------KAGFVPNKSEVLFDMDEE 275
K PGC IE++ +H F+ + G+VP+ + L DMD E
Sbjct: 716 KEPGCSWIEMNSRLHTFISEDRGHPREAEIYSKIDEIIRRIKEVGYVPDMNFSLHDMDRE 775
Query: 276 EKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDR 335
KE L H+EKLA+ FGL++ PG IRI KNLRVC DCH+A IS V+ R ++ D
Sbjct: 776 GKEAGLAYHSEKLAVAFGLLASPPGAPIRIFKNLRVCGDCHSAMKYISGVFTRHIILRDS 835
Query: 336 NRFHHFKNGSCSCKDFW 352
N FHHFK G CSC+D+W
Sbjct: 836 NCFHHFKEGECSCEDYW 852
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 29/185 (15%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV------- 61
EA LF+ ++ +G + T+ S+L C+ LG ++ G +H Y++K E +V
Sbjct: 195 EAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVYVVAGLV 254
Query: 62 -----------------GLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
GL + + TA++ A G +KA+E+F M GV+ +
Sbjct: 255 DMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEGVESN 314
Query: 105 AITFVGVLVACS--HAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE 162
TF +L ACS A E++ H ++ +G ++ LV + + G + A+
Sbjct: 315 QFTFPSILTACSSVSAHCFGEQV-HGCIVRNGFGCNAYVQ--SALVDMYAKCGDLGSAKR 371
Query: 163 LIKNM 167
+++NM
Sbjct: 372 VLENM 376
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 27/183 (14%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE--------- 58
EEA+LLF+++ + + D T S+L C +G ++ G +H ++K E
Sbjct: 398 EEAILLFKKMHARNMKIDHYTFPSVLNCCI-VGRID-GKSVHCLVIKTGFENYKLVSNAL 455
Query: 59 -------VDVGLGMAL------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D+ A+ KDV++ T+L+ G ++L+ F +M+I GV PD
Sbjct: 456 VDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMRISGVSPDQ 515
Query: 106 ITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+L AC+ L++ + H + + K G+R S+ LV + + G + A+ +
Sbjct: 516 FIVASILSACAELTLLEFGKQVHSDFI--KLGLRSSLSVNNSLVTMYAKCGCLDDADAIF 573
Query: 165 KNM 167
+M
Sbjct: 574 VSM 576
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +A+ FR + +G+ ++ T S+L AC+ + A G +H I++
Sbjct: 290 YAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRN----- 344
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
G G + +AL+ + A CG A M+ D +++ ++V C G
Sbjct: 345 -GFGC---NAYVQSALVDMYAKCGDLGSAKRVLENME----DDDVVSWNSMIVGCVRHGF 396
Query: 121 VDERISHFNLMSEKYGIRPSIEHY 144
+E I F M + I+HY
Sbjct: 397 EEEAILLFKKMHAR---NMKIDHY 417
>gi|356573508|ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Glycine max]
Length = 629
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 155/411 (37%), Positives = 222/411 (54%), Gaps = 60/411 (14%)
Query: 1 YVEDSACEEALLLFREVQHK---GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK-- 55
YV +EA LL +E+ G + +T+ S+L AC+ G + VG W+H Y +K
Sbjct: 220 YVGSGFTKEAFLLLKEMVFGCGFGFGLNSITLCSVLSACSQSGDVSVGRWVHCYAVKAVG 279
Query: 56 -NIEVDVGLG--------------------MALKDVMTLTALIVVLAMCGQGNKALEYFY 94
++ V VG M ++V+ A++ LAM G G +E F
Sbjct: 280 WDLGVMVGTSLVDMYAKCGRISAALMVFRHMPRRNVVAWNAMLCGLAMHGMGKVVVEMFA 339
Query: 95 EMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRA 154
M + VKPDA+TF+ +L +CSH+GLV++ +F+ + YGIRP IEHY C+V +LGRA
Sbjct: 340 CM-VEEVKPDAVTFMALLSSCSHSGLVEQGWQYFHDLERAYGIRPEIEHYACMVDLLGRA 398
Query: 155 GRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILS 214
GR+ +AE+L+K +P+ + VLG LLGAC H L E+ ++L+++ P N +++LS
Sbjct: 399 GRLEEAEDLVKKLPIPPNEVVLGSLLGACYAHGKLRLGEKIMRELVQMDPLNTEYHILLS 458
Query: 215 NRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK---------------- 258
N Y+ K K +R+++ R I+K PG I VDG +H F+
Sbjct: 459 NMYALCGKADKANSLRKVLKNRGIRKVPGMSSIYVDGQLHRFIAGDKSHPRTADIYMKLD 518
Query: 259 --------AGFVPNKS-EVLFDMDE--------EEKETALNLHTEKLAITFGLVSPMPGV 301
AG+VPN + +VLF EE E L H+EKLA+ FGL+S
Sbjct: 519 DMICKLRLAGYVPNTNCQVLFGCSNGDDCMEAFEEVEQVLFTHSEKLALCFGLMSTPSSS 578
Query: 302 LIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ I KNLR+C DCH+A I S +Y RE VV DR RFH FK GSCSC D+W
Sbjct: 579 PLCIFKNLRICQDCHSAIKIASDIYKREIVVRDRYRFHSFKQGSCSCSDYW 629
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 143/399 (35%), Positives = 220/399 (55%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+++ + AL +FR++ G+ ++M+ + AC+ L +L +G H Y +K +E D
Sbjct: 572 YLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDD 631
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ G+ K + A+I+ + G +A++ F EMQ
Sbjct: 632 AFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQR 691
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G PD +TF+GVL AC+H+GL+ E + + + M +G++P+++HY C++ +LGRAG++
Sbjct: 692 TGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLD 751
Query: 159 KAEELI-KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA ++ + M D + LL +CRIH NLE E+ A +L EL P+ +YV+LSN Y
Sbjct: 752 KALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLY 811
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ KW+ V+++R+ M E +++K GC IE++ V FV
Sbjct: 812 AGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILE 871
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
K G+ P+ V D+ EEEK L H+EKLA+T+GL+ G IR+ KNLR+C
Sbjct: 872 MKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICV 931
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A +ISKV RE VV D RFHHFKNG CSC D+W
Sbjct: 932 DCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 22/123 (17%)
Query: 16 EVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL------------ 63
+++ GL D T+ SLL AC+ L +L +G +H +I++ +E D+ +
Sbjct: 486 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 545
Query: 64 ----------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLV 113
M K +++ +I G ++AL F +M + G++ I+ + V
Sbjct: 546 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 605
Query: 114 ACS 116
ACS
Sbjct: 606 ACS 608
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 150/397 (37%), Positives = 211/397 (53%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------- 54
V++S EEA+ +FR++Q G D+ T+ S+L AC+ L +G +H Y+ +
Sbjct: 556 VKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDL 615
Query: 55 --KNIEVDV-----GLG--------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
N VD+ GL M +KDV + +I M G G +AL F +M +
Sbjct: 616 ARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLS 675
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
VKPD+ TF VL ACSH+ LV+E + FN MS + + P EHY C+V I RAG + +
Sbjct: 676 MVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEE 735
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A I+ MPM L CR++ N+E A+ +A++L E+ P+ +YV L N +
Sbjct: 736 AYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVT 795
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
++ W + +IR+LM ER I K PGC V VH FV
Sbjct: 796 AKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAK 855
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
AG+ P+ VL D+D+EEK +L H+EKLA+ FG+++ IR+ KNLR+C DC
Sbjct: 856 IKAAGYKPDTDYVLHDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDC 915
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H A +S V VV D RFHHFKNG+CSCKDFW
Sbjct: 916 HNAIKYMSNVVGVTIVVRDSLRFHHFKNGNCSCKDFW 952
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 22/138 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV ++ L +FRE+ G+ D + M S+L AC+ L L+ G +H + +K + D
Sbjct: 318 YVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVED 377
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL ++V+T +L CG K L F EM +
Sbjct: 378 VFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVL 437
Query: 99 RGVKPDAITFVGVLVACS 116
GVKPD +T + +L ACS
Sbjct: 438 NGVKPDLVTMLSILHACS 455
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV ++ L +FRE+ G+ D VT+ +L AC+ L L+ G +H + +K + +
Sbjct: 217 YVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVEN 276
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL ++V+T +L CG K L F EM +
Sbjct: 277 VFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGL 336
Query: 99 RGVKPDAITFVGVLVACSH 117
GVKPD + +L ACS
Sbjct: 337 NGVKPDPMAMSSILPACSQ 355
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 22/138 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV ++ L +FR++ + + +T+ S+L C+ L L+ G +H ++++ + D
Sbjct: 116 YVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVED 175
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + A +DV+T +L CG K L F EM +
Sbjct: 176 VFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVL 235
Query: 99 RGVKPDAITFVGVLVACS 116
GVKPD +T +L ACS
Sbjct: 236 DGVKPDPVTVSCILSACS 253
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 23/161 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV ++ L +FRE+ G+ D VTM+S+L AC+ L L+ G +H + ++ + D
Sbjct: 419 YVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVED 478
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL ++V + ++ + K L F +M
Sbjct: 479 VFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNR 538
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRP 139
VK D IT+ V+ C ++E + F M + G +P
Sbjct: 539 DEVKADEITWSVVIGGCVKNSRIEEAMEIFRKM-QTMGFKP 578
>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
Length = 805
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 209/380 (55%), Gaps = 47/380 (12%)
Query: 20 KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIM-KKNIEVDVGLGMAL----------- 67
+G++ D++ ++ L AC L AL G +H + + ++ DV LG A+
Sbjct: 426 RGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLR 485
Query: 68 -----------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACS 116
+D ++ A++ A G+ + F M G + I F+ +L AC+
Sbjct: 486 DARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLSACA 545
Query: 117 HAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVL 176
HAGLV HF+ M+ +G+ P+ EHYGC+V +LGR GR+A A +++ MP+ D
Sbjct: 546 HAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATW 605
Query: 177 GGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAER 236
L+GACRI+ + E AA+++LEL D+ +YV L N YS++ +W +R++MA+
Sbjct: 606 MALMGACRIYGDTERGRFAAERVLELRADHTAAYVALCNIYSAAGRWDDAAAVRKIMADL 665
Query: 237 NIKKPPGCILIEVDGVVHEFV------------------------KAGFVPNKSEVLFDM 272
++K PG IE+ VHEFV +AG+ EVL D+
Sbjct: 666 GLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVLHDV 725
Query: 273 DEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVV 332
+EE+KE L H+EKLAI FG++S G +R+IKNLRVC DCH A+ ISKV+ RE VV
Sbjct: 726 EEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGREIVV 785
Query: 333 MDRNRFHHFKNGSCSCKDFW 352
D RFHHFK+G+CSC D+W
Sbjct: 786 RDVRRFHHFKDGACSCGDYW 805
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 80/193 (41%), Gaps = 26/193 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACT-----------HLGALEVGMWLH 49
YV A+ LF + +G+ D + VS+L AC+ H A+E G+ L
Sbjct: 103 YVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQ 162
Query: 50 PYIMKKNIEVDVGLGMALKD-------------VMTLTALIVVLAMCGQGNKALEYFYEM 96
+ + + G +L+D V+ A+I + G +ALE FY M
Sbjct: 163 EIVASALVSM-YGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRM 221
Query: 97 QIRGVKPDAITFVGVLVACSHA-GLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
G+ PD +TFV V ACS + L ++ F+ ++ G+ + LV R G
Sbjct: 222 LQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCG 281
Query: 156 RIAKAEELIKNMP 168
I A + MP
Sbjct: 282 EIDCARKFFAEMP 294
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 10/220 (4%)
Query: 59 VDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHA 118
+DV +A K ++ T LI G A+ F+ + G+ DAI FV VL ACS
Sbjct: 82 IDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSE 141
Query: 119 G-LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLG 177
L R+ H + G++ + LV + GR G + A L ++ LD +
Sbjct: 142 EFLAAGRLIHRCAVEAGLGLQEIVA--SALVSMYGRCGSLRDANALFGHLERHLDVVLWN 199
Query: 178 GLLGACRIHDNLEAAERAAQQLLEL-LPDNGGSYVILSNRYSSSRKWK--KVKRIRELMA 234
++ A + + A ++L+L +P + ++V + SSS + +VK +
Sbjct: 200 AMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHACLD 259
Query: 235 ERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFDMDE 274
E + G ++ +V+ + + G + + +M E
Sbjct: 260 ETGL----GSDVVVATALVNAYARCGEIDCARKFFAEMPE 295
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 3/123 (2%)
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC-SHAGLVDERISH 127
D +TA+I V A C + + RG+ PD I ++ L AC S A L + R H
Sbjct: 396 DAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIH 455
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHD 187
+ +++ R + +V + G+ G + A + MP A D +L A H
Sbjct: 456 ACVAADRRLDR-DVTLGNAIVSMYGQCGSLRDARDAFDGMP-ARDEISWNAMLSASAQHG 513
Query: 188 NLE 190
+E
Sbjct: 514 RVE 516
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 15/119 (12%)
Query: 3 EDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGM--WLHPYIMKKNIEVD 60
++ + EAL +F + G+ D VT VS+ AC+ +L H + +
Sbjct: 207 QNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHACLD------E 260
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
GLG DV+ TAL+ A CG+ + A ++F EM R +A+++ ++ A + G
Sbjct: 261 TGLG---SDVVVATALVNAYARCGEIDCARKFFAEMPER----NAVSWTSMIAAFTQIG 312
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 147/399 (36%), Positives = 218/399 (54%), Gaps = 48/399 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLH---------PY 51
Y ++ EEA+ +F E+Q G+ D T+ S++ +C +L +LE G H Y
Sbjct: 348 YGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHY 407
Query: 52 IMKKNIEVDVGLG--------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
I N V + G M D ++ TAL+ A G+ + ++ F +M
Sbjct: 408 ITVSNALVTL-YGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKML 466
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+ VKPD +TF+GVL ACS AG V++ S+F+ M + +GI P +HY C++ + R+GR+
Sbjct: 467 AKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRL 526
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+AEE IK MPM D G LL ACR+ ++E + AA+ LLE+ P N SYV+L + +
Sbjct: 527 KEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMH 586
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF--------------------- 256
++ W +V ++R M +R +KK PGC I+ VH F
Sbjct: 587 ATKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLN 646
Query: 257 ---VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
++ G+ P+ S VL D+ + +K ++ H+EKLAI FGL+ + IRI+KNLRVC
Sbjct: 647 SKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLMFVPHEMPIRIVKNLRVCV 706
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH AT +ISK+ R+ +V D RFH F NG CSC DFW
Sbjct: 707 DCHNATKLISKITGRDILVRDAVRFHKFSNGVCSCGDFW 745
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 125/306 (40%), Gaps = 62/306 (20%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ ++ +AL FR ++ +G+ D+ T S+L AC L ALE G +H YI++ + + +
Sbjct: 247 FTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDN 306
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL K++++ TALIV G +A+ F EMQ
Sbjct: 307 VFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQR 366
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ PD T V+ +C++ ++E + F+ ++ G+ I LV + G+ G I
Sbjct: 367 DGIDPDDFTLGSVISSCANLASLEEG-AQFHCLALVSGLMHYITVSNALVTLYGKCGSIE 425
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A L M HD + S+ L Y+
Sbjct: 426 DAHRLFDEM----------------LFHDQV-------------------SWTALVTGYA 450
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFDMDEEEKE 278
+ K+ + E M +++ KP G I GV+ +AGFV M ++
Sbjct: 451 QFGRAKETIDLFEKMLAKDV-KPDGVTFI---GVLSACSRAGFVEKGCSYFHSMQKDHGI 506
Query: 279 TALNLH 284
++ H
Sbjct: 507 VPIDDH 512
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 143/399 (35%), Positives = 220/399 (55%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+++ + AL +FR++ G+ ++M+ + AC+ L +L +G H Y +K +E D
Sbjct: 322 YLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDD 381
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ G+ K + A+I+ + G +A++ F EMQ
Sbjct: 382 AFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQR 441
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G PD +TF+GVL AC+H+GL+ E + + + M +G++P+++HY C++ +LGRAG++
Sbjct: 442 TGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLD 501
Query: 159 KAEELI-KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA ++ + M D + LL +CRIH NLE E+ A +L EL P+ +YV+LSN Y
Sbjct: 502 KALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLY 561
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ KW+ V+++R+ M E +++K GC IE++ V FV
Sbjct: 562 AGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILE 621
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
K G+ P+ V D+ EEEK L H+EKLA+T+GL+ G IR+ KNLR+C
Sbjct: 622 MKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICV 681
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A +ISKV RE VV D RFHHFKNG CSC D+W
Sbjct: 682 DCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 720
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 22/123 (17%)
Query: 16 EVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL------------ 63
+++ GL D T+ SLL AC+ L +L +G +H +I++ +E D+ +
Sbjct: 236 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 295
Query: 64 ----------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLV 113
M K +++ +I G ++AL F +M + G++ I+ + V
Sbjct: 296 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 355
Query: 114 ACS 116
ACS
Sbjct: 356 ACS 358
>gi|220061995|gb|ACL79585.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
Length = 589
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 141/376 (37%), Positives = 213/376 (56%), Gaps = 53/376 (14%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKD--------------- 69
++VT+V++L AC +G L+ GM++H + K ++ +V + +L D
Sbjct: 219 NEVTIVAVLSACAQIGLLKDGMYVHEFAKKFGLDRNVRVCNSLIDMYSKCGSLSRALDVF 278
Query: 70 ---------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+++ A I +M G G AL F EM R ++PD +T++ VL C+H+GL
Sbjct: 279 HSIKPEDRTLVSYNAAIQAHSMHGHGGDALRLFDEMPTR-IEPDGVTYLAVLCGCNHSGL 337
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLL 180
VD+ + FN M + P+++HYG +V +LGRAGR+ +A + + +MP D + LL
Sbjct: 338 VDDGLRVFNSMR----VAPNMKHYGTIVDLLGRAGRLTEAYDTVISMPFPADIVLWQTLL 393
Query: 181 GACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKK 240
GA ++H +E AE AA +L EL + G YV+LSN Y+S +W V R+R+ M +++K
Sbjct: 394 GAAKMHGVVELAELAANKLAELGSNVDGDYVLLSNVYASKARWMDVGRVRDTMRSNDVRK 453
Query: 241 PPGCILIEVDGVVHEFVKA------------------------GFVPNKSEVLFDMDEEE 276
PG E+DGV+H+F+ G+ P S VL D+ EEE
Sbjct: 454 VPGFSYTEIDGVMHKFINGDKEHPRWQEIYRALEDIVSRISELGYEPETSNVLHDIGEEE 513
Query: 277 KETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRN 336
K+ AL H+EKLAI FGL++ PG +R+IKNLR+C DCH +ISK Y R V+ DR
Sbjct: 514 KQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLISKAYGRVIVIRDRA 573
Query: 337 RFHHFKNGSCSCKDFW 352
RFH F++G CSC+D+W
Sbjct: 574 RFHRFEDGQCSCRDYW 589
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFY-------EMQIRGVKPDAITFVGVLVACSH 117
M ++DV T +L+ LA + N AL F+ E+ R +P+ +T V VL AC+
Sbjct: 174 MTVRDVATWNSLLAGLAQGTEPNLALALFHRLANSFQELPSRE-EPNEVTIVAVLSACAQ 232
Query: 118 AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
GL+ + + + + ++K+G+ ++ L+ + + G +++A ++ ++
Sbjct: 233 IGLLKDGM-YVHEFAKKFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHSI 281
>gi|147776476|emb|CAN67357.1| hypothetical protein VITISV_032923 [Vitis vinifera]
Length = 485
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 137/328 (41%), Positives = 185/328 (56%), Gaps = 40/328 (12%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSH------- 117
M +DV++ +++ A CG+ N+AL F +M+ GVKP T V +L AC+H
Sbjct: 158 MPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPSEATVVSLLSACAHLGALDKG 217
Query: 118 --------------------------AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYIL 151
AG+VDE + MS YGI P +EHYGC++ +L
Sbjct: 218 LHXHTYINDNRIEVNSIVXTALVDIHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLL 277
Query: 152 GRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYV 211
RAG + +A ELI MPM + LG LLG CRIH N E E + L+ L P G Y+
Sbjct: 278 ARAGLLEEAMELIGTMPMEPNPCALGALLGGCRIHGNFELGEMVGKXLINLQPCXSGRYI 337
Query: 212 ILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA-------GFVPN 264
+LSN Y++++KW +++R LM I K G +IE G+VH FV G+ +
Sbjct: 338 LLSNIYAAAKKWDDARKVRNLMKVNXISKVXGVSVIEXKGMVHRFVAGDWLKSAIGYSAD 397
Query: 265 KSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISK 324
VL DM+EE+KE AL +H+EKLAI +GL+ IRI+KNLRVC DCH +ISK
Sbjct: 398 TGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVXKLISK 457
Query: 325 VYNRETVVMDRNRFHHFKNGSCSCKDFW 352
VY RE +V DRN+FHHF++G CSC DFW
Sbjct: 458 VYGREIIVRDRNQFHHFEDGECSCLDFW 485
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 143/395 (36%), Positives = 214/395 (54%), Gaps = 50/395 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD-VGLGMA 66
E+ L FRE+Q G D + V + AC++L + +G +H +K ++ + V + A
Sbjct: 328 EDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNA 387
Query: 67 L----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
L + ++L ++I A G ++L F M + + P+
Sbjct: 388 LVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPN 447
Query: 105 AITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+ITF+ VL AC H G V+E +FN+M E++ I P EHY C++ +LGRAG++ +AE +I
Sbjct: 448 SITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERII 507
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWK 224
+ MP LLGACR H N+E A +AA + L L P N YV+LSN Y+S+ +W+
Sbjct: 508 ETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWE 567
Query: 225 KVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAG 260
+ ++ LM ER +KK PGC IE+D VH FV +AG
Sbjct: 568 EAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGKMLKKMKQAG 627
Query: 261 FVPNKSEVLF---DMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHT 317
+VP+ L +++ +E+E L H+EKLA+ FGL+S GV I ++KNLR+C DCH
Sbjct: 628 YVPDIRWALVKDEEVEPDERERRLLYHSEKLAVAFGLISTEEGVPILVVKNLRICGDCHN 687
Query: 318 ATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
A +IS + RE V D +RFH FK G CSC+D+W
Sbjct: 688 AVKLISALTGREITVRDTHRFHCFKEGHCSCRDYW 722
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 142/398 (35%), Positives = 216/398 (54%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
++++ E AL LFR++ G+ ++M+++ AC+ L +L +G H Y +K +E +
Sbjct: 556 HLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDN 615
Query: 61 VGL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ G+ K + A+I+ M G+ +A++ F EMQ
Sbjct: 616 AFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQR 675
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G PD +TF+GVL AC+H+GL+ E + + + M +G++P+++HY C++ +LGRAG++
Sbjct: 676 TGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLD 735
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A + M D + LL CRIH NLE E+ A +L L P+ +YV+LSN Y+
Sbjct: 736 NALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYA 795
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
KW V+++R+ M E +++K GC IE++G V FV
Sbjct: 796 GLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEM 855
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+ P+ S V D+ EEEK L H+EKLAIT+GL+ G +R+ KNLR+C D
Sbjct: 856 KIWKMGYRPDTSSVQHDLSEEEKIEQLRGHSEKLAITYGLIKTSEGTTLRVYKNLRICVD 915
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A +ISKV RE VV D RFHHF G CSC D+W
Sbjct: 916 CHNAAKLISKVMEREIVVRDNKRFHHFNKGFCSCGDYW 953
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 22/138 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + S +L ++++ GL D T+ SLL AC+ L +L +G +H +I++ +E D
Sbjct: 455 YAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 514
Query: 61 VGLGMA----------------LKDVMTLTALI----VVLAMCGQG--NKALEYFYEMQI 98
+ + ++ L D M +L+ V+ G +AL F +M +
Sbjct: 515 LFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVL 574
Query: 99 RGVKPDAITFVGVLVACS 116
G++P I+ + V ACS
Sbjct: 575 YGIQPCGISMMTVFGACS 592
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 205/375 (54%), Gaps = 47/375 (12%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMK----------KNIEVD-------------V 61
+ T+ L+AC L AL +G +H Y ++ N +D V
Sbjct: 476 NAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLV 535
Query: 62 GLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLV 121
M K+ +T T+L+ M G G +AL F EM+ G K D +T + VL ACSH+G++
Sbjct: 536 FDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMI 595
Query: 122 DERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLG 181
D+ + +FN M +G+ P EHY CLV +LGRAGR+ A LI+ MPM V L
Sbjct: 596 DQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLS 655
Query: 182 ACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKP 241
CRIH +E E AA+++ EL ++ GSY +LSN Y+++ +WK V RIR LM + +KK
Sbjct: 656 CCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKR 715
Query: 242 PGCILIE-VDGVVHEFV-----------------------KAGFVPNKSEVLFDMDEEEK 277
PGC +E + G FV G+VP L D+D+EEK
Sbjct: 716 PGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEK 775
Query: 278 ETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNR 337
+ L H+EKLA+ +G+++ G IRI KNLRVC DCHTA +S++ + + ++ D +R
Sbjct: 776 DDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSR 835
Query: 338 FHHFKNGSCSCKDFW 352
FHHFKNGSCSCK +W
Sbjct: 836 FHHFKNGSCSCKGYW 850
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE-- 58
Y + EAL + R++ G+ ++VT++S+L C +GAL G +H Y +K I+
Sbjct: 340 YAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLR 399
Query: 59 -----------------------VDVGLGM------ALKDVMTLTALIVVLAMCGQGNKA 89
VD M +DV+T T +I + G NKA
Sbjct: 400 KNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKA 459
Query: 90 LEYFYEM--QIRGVKPDAITFVGVLVAC-SHAGL-VDERISHFNLMSEKYGIRPSIEHYG 145
LE EM + +P+A T LVAC S A L + ++I + L +++ + + +
Sbjct: 460 LELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSN-- 517
Query: 146 CLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAA 192
CL+ + + G I+ A + NM MA + L+ +H E A
Sbjct: 518 CLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGEEA 563
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 10 ALLLFREVQHK-GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG---- 64
AL +F + ++ G D +T+V++L C LG +G LH + + + ++ +G
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 271
Query: 65 ------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
M++KDV++ A++ + G+ A+ F +MQ +K D +
Sbjct: 272 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 331
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPS 140
T+ + + GL E + M GI+P+
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSS-GIKPN 364
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 28/192 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ + L LF + T D T + AC + ++ G H + +
Sbjct: 102 YGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISN 161
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G M++ DV++ ++I A G+ ALE F M
Sbjct: 162 VFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTN 221
Query: 99 R-GVKPDAITFVGVLVACSHAGL--VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
G +PD IT V VL C+ G + +++ F + SE + ++ CLV + + G
Sbjct: 222 EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSE---MIQNMFVGNCLVDMYAKCG 278
Query: 156 RIAKAEELIKNM 167
+ +A + NM
Sbjct: 279 MMDEANTVFSNM 290
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEAL +F E++ G D VT++ +L AC+H G ++ GM Y + V G
Sbjct: 561 EEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGM---EYFNRMKTVFGVSPGPE- 616
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
L+ +L G+ N AL EM + +P + +V L C G V+
Sbjct: 617 ----HYACLVDLLGRAGRLNAALRLIEEMPM---EPPPVVWVAFLSCCRIHGKVE 664
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 264 bits (674), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 141/379 (37%), Positives = 210/379 (55%), Gaps = 46/379 (12%)
Query: 20 KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK----KNIEVDVGL------------ 63
+ L D + ++ +L +C+H GAL+ G +H +K NI V +
Sbjct: 319 QNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLED 378
Query: 64 ------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSH 117
GM KDV+ A+I M G G A++ F +M+ G+ PD TFV VL ACSH
Sbjct: 379 AKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSH 438
Query: 118 AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLG 177
AG+V E + F M + + P+++HY C++ ILGRAG++ A I NMP D V
Sbjct: 439 AGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYS 498
Query: 178 GLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERN 237
LLGACRIH N++ +Q++ E+ P++ G YV+LSN Y+ + W+ VK R + +
Sbjct: 499 TLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKR 558
Query: 238 IKKPPGCILIEVDGVVHEFV------------------------KAGFVPNKSEVLFDMD 273
+KK PG IE++ ++ F+ KAG+VPN + +L D+
Sbjct: 559 MKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVS 618
Query: 274 EEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVM 333
++ K+ L H+EK+AI FGL+ P +IRI KNLR C+DCHTA+ +SKV+ R V+
Sbjct: 619 DDMKKDILYHHSEKMAIAFGLMRTKPETIIRITKNLRTCDDCHTASKFVSKVFGRVLVIK 678
Query: 334 DRNRFHHFKNGSCSCKDFW 352
D NRFH F++G CSC+D+W
Sbjct: 679 DANRFHVFQDGVCSCRDYW 697
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 23/146 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEA+ LF ++ KGL D T++SL+ A +G L+VG +H +I++ E D
Sbjct: 198 YSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYEND 257
Query: 61 ----------------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM-Q 97
V M++KDV T ++ + ++A+++F +M
Sbjct: 258 KHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLG 317
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDE 123
I+ +K D+I +G+L +CSH+G + +
Sbjct: 318 IQNLKLDSIALMGILSSCSHSGALQQ 343
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 103/242 (42%), Gaps = 35/242 (14%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EA+ +FRE+ + VT+ S+L A +LG + + +H + ++ E
Sbjct: 105 EAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFE---------G 155
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHF 128
+V TAL+ + + G A + F M R V +T+ ++ S G +E I F
Sbjct: 156 NVFVETALVDMYSKFGCMGVARQLFESMSERNV----VTWNAIVSGYSDHGFSEEAIDLF 211
Query: 129 NLMSEK------YGIR---PSIEHYGCLVYILGRAGRIAK-AEELIKNMPMALDHFVLGG 178
NLM K Y I P+ GCL G G I + E K++ AL +
Sbjct: 212 NLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVS- 270
Query: 179 LLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK-VKRIRELMAERN 237
H+ ++ A R E+ + ++ ++ +SS R W + +K +++ +N
Sbjct: 271 -------HNCVDDAHRV---FSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQN 320
Query: 238 IK 239
+K
Sbjct: 321 LK 322
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 152/398 (38%), Positives = 221/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ E+AL LF + + +VT S+L A L ALE G +H +K D
Sbjct: 383 YVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKD 442
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +L +D ++ ALI ++ G G +AL F MQ
Sbjct: 443 SVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQ 502
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
KP+ +TFVGVL ACS+AGL+D+ +HF M + YGI P IEHY C+V++LGR+G+
Sbjct: 503 SNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFD 562
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI +P V LLGAC IH NL+ + AQ++LE+ P + ++V+LSN Y+
Sbjct: 563 EAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYA 622
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++++W V +R+ M ++ +KK PG +E GVVH F
Sbjct: 623 TAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYK 682
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VP+ S VL D++++EKE L +H+E+LA+ FGL+ G IRIIKNLR+C D
Sbjct: 683 KTRDAGYVPDCSVVLLDVEDDEKERLLWMHSERLALAFGLIQIPSGCSIRIIKNLRICVD 742
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH ++SK+ RE V+ D NRFHHF+ G CSC D+W
Sbjct: 743 CHAVIKLVSKIVQREIVIRDINRFHHFRQGVCSCGDYW 780
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 23/145 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E+ E++LLLF +++ G + T+ + L +C L A +VG +H +K + D
Sbjct: 180 YAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRD 239
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEM-Q 97
+ +G+AL D++ + +I A + +ALE F M Q
Sbjct: 240 LYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQ 299
Query: 98 IRGVKPDAITFVGVLVACSHAGLVD 122
V P+ TF VL AC+ L++
Sbjct: 300 SSVVVPNNFTFASVLQACASLVLLN 324
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 23/137 (16%)
Query: 1 YVEDSACEEALLLF-REVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y + +EAL LF R Q + + T S+L AC L L +G +H ++K ++
Sbjct: 281 YAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDS 340
Query: 60 DVGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQ 97
+V + AL DV + +IV G G KAL F M
Sbjct: 341 NVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNML 400
Query: 98 IRGVKPDAITFVGVLVA 114
++P +T+ VL A
Sbjct: 401 GLDIQPTEVTYSSVLRA 417
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 138/391 (35%), Positives = 216/391 (55%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK--NIEVDVGLG- 64
E+AL++F ++ G + T +S + A +L ++ G +H +K E +V
Sbjct: 530 EQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANAL 589
Query: 65 -------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
M+L++ ++ +I + G+G +AL+ F +M+ G+KP+
Sbjct: 590 ISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPND 649
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TF+GVL ACSH GLV+E +S+F MS YG+ P +HY C+V ILGRAG++ +A +
Sbjct: 650 VTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVD 709
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP+ + + LL AC++H N+E E AA+ LLEL P + SYV+LSN Y+ + KW
Sbjct: 710 EMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWAN 769
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
++R++M +R I+K PG IEV VH F K G+
Sbjct: 770 RDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGY 829
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
+ + ++E+K+ +H+EKLA+ FGL++ P + +R+IKNLRVC+DCH+
Sbjct: 830 KQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKF 889
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S+V RE V+ D RFHHF +GSCSC D+W
Sbjct: 890 TSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 26/225 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E AL +F E+Q GL D VT+ SLL AC +G L+ G LH Y++K + D +L
Sbjct: 227 ECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSL 286
Query: 68 KD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D V+ ++V K+ E F +MQ G+ P+
Sbjct: 287 LDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNK 346
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
T+ +L C+ G + E + +S K G + G L+ + + + KA ++++
Sbjct: 347 FTYPCILRTCTCTGQI-ELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILE 405
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE--LLPDNGG 208
M D ++ HD E A +++ + + PDN G
Sbjct: 406 -MLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIG 449
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 117/299 (39%), Gaps = 66/299 (22%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN---- 56
Y + +EA L+ ++ + + S+L ACT G +H + K+
Sbjct: 119 YAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSE 178
Query: 57 -------IEVDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
I + +G G M D +T LI A CG G AL+ F EMQ+
Sbjct: 179 TFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQL 238
Query: 99 RGVKPDAITFVGVLVACS-----------HAGLVDERISHFNLMSE-------------- 133
G++PD +T +L AC+ H+ L+ +S F+ ++E
Sbjct: 239 SGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMS-FDYITEGSLLDLYVKCGDIE 297
Query: 134 ------KYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDH---FVLGGLLGACR 184
G R ++ + ++ G+ +AK+ E+ M H F +L C
Sbjct: 298 TAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCT 357
Query: 185 IHDNLEAAERAAQQLLELLPDNG---GSYV--ILSNRYSSSRKWKKVKRIRELMAERNI 238
+E E Q+ L NG YV +L + YS R K ++I E++ +R++
Sbjct: 358 CTGQIELGE----QIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDV 412
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 92/235 (39%), Gaps = 27/235 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ CEEAL F+E+Q G+ D + + S AC + A+ G+ +H + D
Sbjct: 422 YVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAAD 481
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + L KD +T LI +AL F +M
Sbjct: 482 ISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQ 541
Query: 99 RGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G K + TF+ + A A L D ++ + + K G E L+ + G+ G I
Sbjct: 542 AGAKYNVFTFISAISAL--ANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSI 599
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHD-NLEAAERAAQQLLELLPDNGGSYV 211
A+ + M + + ++ +C H LEA + Q E L N +++
Sbjct: 600 EDAKMIFSEMSLR-NEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFI 653
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 29/214 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + S ++ +F ++Q G+ +K T +L CT G +E+G +H +K E D
Sbjct: 321 YGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESD 380
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + L +DV++ T++I +AL F EMQ
Sbjct: 381 MYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQD 440
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERIS-HFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV PD I AC+ + + + H + Y SI + LV + R GR
Sbjct: 441 CGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISI--WNTLVNLYARCGRS 498
Query: 158 AKAEELIKNMPMALDHFVLGGLL---GACRIHDN 188
+A L + + D GL+ G R+++
Sbjct: 499 EEAFSLFREIDHK-DEITWNGLISGFGQSRLYEQ 531
>gi|242090555|ref|XP_002441110.1| hypothetical protein SORBIDRAFT_09g020580 [Sorghum bicolor]
gi|241946395|gb|EES19540.1| hypothetical protein SORBIDRAFT_09g020580 [Sorghum bicolor]
Length = 516
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 222/390 (56%), Gaps = 47/390 (12%)
Query: 10 ALLLFREVQHKGL-TGDKVTMVSLLLACTHLGALEVGMWLHPY---------IMKKNIEV 59
A+ LF E++ G+ D + +++ L AL +G LH + ++ N V
Sbjct: 127 AVGLFVEMRRDGVRIDDAFVLATVVGGAAELAALVLGRQLHGFAITLGFLSSMIVGNALV 186
Query: 60 D-------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
D V G+ ++DV++ T ++V A G+ + L + M + G+KP+ +
Sbjct: 187 DMYSKCSDIHSAREVFGGIIVRDVVSWTTILVGEAQHGRVEEVLALYDRMLLAGMKPNEV 246
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFVG++ ACSHAGLV + F+ M +YGI+P ++HY C + +L R+G +++AEELI
Sbjct: 247 TFVGLIYACSHAGLVQKGRQLFDSMKREYGIKPGLQHYTCYLDLLSRSGYLSEAEELITT 306
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP D G LL AC+ H++ + R A LLEL P + +Y++LSN Y+ + KW V
Sbjct: 307 MPYEPDEASWGALLSACKKHNDTQMCLRVADNLLELRPKDPSTYILLSNVYAVNCKWDSV 366
Query: 227 KRIRELMAERNIKKPPGCILIE------------------------VDGVVHEFVKAGFV 262
++R++MAE I+K PG IE ++ +V E K G+V
Sbjct: 367 AKVRKIMAEMEIRKEPGYSWIEAGRESRMFHAGEVPLDIGEEITRFLEELVSEMRKRGYV 426
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ S V+ D++E EKE L LH+E+LA+ FG++ PG +IR++KNLRVC DCHT I
Sbjct: 427 PDTSSVMHDLEENEKEQHLFLHSERLAVAFGILKSPPGSVIRVVKNLRVCGDCHTVMKFI 486
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S++ R+ +V D +RFHHF++G+CSC +FW
Sbjct: 487 SEIAQRKIIVRDASRFHHFEDGNCSCSEFW 516
>gi|302809831|ref|XP_002986608.1| hypothetical protein SELMODRAFT_124337 [Selaginella moellendorffii]
gi|300145791|gb|EFJ12465.1| hypothetical protein SELMODRAFT_124337 [Selaginella moellendorffii]
Length = 487
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 144/397 (36%), Positives = 221/397 (55%), Gaps = 52/397 (13%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLH-----PYIMKK----NIE 58
++++ +FRE+ +GL D T S++ AC+ GALE G +H P + +K N+
Sbjct: 91 KDSIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVV 150
Query: 59 VDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG 100
V+ L M K+ ++ A++ A GQG++A + G
Sbjct: 151 VETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFLRAAACEG 210
Query: 101 VKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA 160
V+ D+ +F+ VL+ACSH+G+++ HF LM + + P+ E+Y C+V +L R+GR+ A
Sbjct: 211 VELDSASFISVLIACSHSGMLEVAYDHFQLMLSDFDLVPAAENYRCMVDLLARSGRLGDA 270
Query: 161 EELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSS 220
+EL+ +MP + D LLG CR+ +LE A AA+Q L P N Y +LS+ YS++
Sbjct: 271 DELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFNLEPQNTAPYTLLSSLYSAT 330
Query: 221 RKWKKVKRIRELMAERNIKK-PPGCILIEVDGVVHEFV---------------------- 257
K ++ +R M ER ++K PG +IEV G VHEFV
Sbjct: 331 GKKDELVELRSSMKERGLRKLVPGRSVIEVHGRVHEFVAGDSSHPQTDKILRELDILNVE 390
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+AGFVP+ V+ D+ E+KE L LH+EKLA+ FGL+S G+ + ++KNLRVC+DC
Sbjct: 391 LKQAGFVPSTDGVVHDLKTEDKEEILALHSEKLAVAFGLISTKSGIPLLVLKNLRVCSDC 450
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H A +ISK+ +R V D NRFH F++G+CSC D+W
Sbjct: 451 HAAIKLISKLRSRVITVRDANRFHRFQSGTCSCGDYW 487
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 24 GDKVTMVSLLLACTHLGALEVGMWLH-PYIMKKNIEVDVGLGMAL--------------- 67
DK T +L AC+ GAL G +H +I E D+G+ AL
Sbjct: 5 ADKTTFTIILSACSTSGALAAGREIHEKFIALTEYERDLGVQNALLNMYAKCGSLEVARD 64
Query: 68 -------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+D +++ +I A G G +++ F EM + G+ D TF V+ ACS G
Sbjct: 65 IFRKMERRDQVSMNVMIAAFAQQGLGKDSIQVFREMDLEGLPQDDTTFASVITACSCCGA 124
Query: 121 VD--ERISHFNLMSEKYGIR---PSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFV 175
++ +RI H ++ G + P++ LV + G+ G + +A+ + K M +
Sbjct: 125 LEFGKRI-HKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTK-NSVS 182
Query: 176 LGGLLGAC 183
+L AC
Sbjct: 183 WNAMLAAC 190
>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
Length = 721
Score = 263 bits (673), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 145/404 (35%), Positives = 223/404 (55%), Gaps = 52/404 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLH-----PYIMKK 55
+ + +E++ +FRE+ +GL D T S++ AC+ GALE G +H P + +K
Sbjct: 318 FAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRK 377
Query: 56 ----NIEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYF 93
N+ V+ L M K+ ++ A++ A GQG++A +
Sbjct: 378 CCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFL 437
Query: 94 YEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGR 153
GV+ D+ +F+ VL+ACSH+G+++ HF LM + + P+ E+Y C+V +L R
Sbjct: 438 RAAACEGVELDSASFISVLIACSHSGMLEVAYDHFQLMLSDFDLVPAAENYRCMVDLLAR 497
Query: 154 AGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVIL 213
+GR+ A+EL+ +MP + D LLG CR+ +LE A AA+Q L P N Y +L
Sbjct: 498 SGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFNLEPQNTAPYTLL 557
Query: 214 SNRYSSSRKWKKVKRIRELMAERNIKK-PPGCILIEVDGVVHEFV--------------- 257
S+ YS++ K ++ +R M ER ++K PG +IEV G VHEFV
Sbjct: 558 SSLYSATGKKDELVELRSSMKERGLRKLVPGRSVIEVHGRVHEFVAGDSSHPQIDKILRE 617
Query: 258 ---------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKN 308
+AGFVP+ V+ D+ E+KE L LH+EKLA+ FGL+S G+ + ++KN
Sbjct: 618 LDILNVELKQAGFVPSTDGVVHDLKTEDKEEILALHSEKLAVAFGLISTKSGIPLLVLKN 677
Query: 309 LRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
LRVC+DCH A +ISK+ +R V D NRFH F++G+CSC D+W
Sbjct: 678 LRVCSDCHGAIKLISKLRSRVITVRDANRFHRFQSGTCSCGDYW 721
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 35/205 (17%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV---GLGM 65
+AL LF ++ G+ + T V +L AC + +LE +H I++ ++ DV G+
Sbjct: 225 QALDLFEKMAEHGVRPCRATFVGVLGACNDVTSLEK---IHARIVETGLQFDVRDVGVQN 281
Query: 66 AL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
AL +D +++ +I A G G ++++ F EM + G+
Sbjct: 282 ALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMDLEGLPQ 341
Query: 104 DAITFVGVLVACSHAGLVD--ERISHFNLMSEKYGIR---PSIEHYGCLVYILGRAGRIA 158
D TF V+ ACS G ++ +RI H ++ G + P++ LV + G+ G +
Sbjct: 342 DDTTFASVITACSCCGALEFGKRI-HKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLE 400
Query: 159 KAEELIKNMPMALDHFVLGGLLGAC 183
+A+ + K M + +L AC
Sbjct: 401 QAKAVFKAMTTK-NSVSWNAMLAAC 424
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 24/114 (21%)
Query: 27 VTMVSLLLACTHLGALEVGMWLHPYI-MKKNIEVDVGLGMAL------------------ 67
+T + L AC+ LG L+ G +H I + I V L A+
Sbjct: 140 MTFATALSACSSLGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFD 199
Query: 68 ----KDVMTLTALIVVLAMCGQGN-KALEYFYEMQIRGVKPDAITFVGVLVACS 116
K+V++ ALI A G + +AL+ F +M GV+P TFVGVL AC+
Sbjct: 200 RIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACN 253
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 263 bits (673), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 221/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ EEA L+F+++Q + D TMVSL+ AC+HL AL+ G H ++ + + +
Sbjct: 301 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASE 360
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL +D+++ +I + G G +A F EM
Sbjct: 361 TSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNN 420
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G PD +TF+ +L ACSH+GLV E F++M YG+ P +EHY C+V +L R G +
Sbjct: 421 LGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLD 480
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E I++MP+ D V LLGACR++ N++ ++ ++ + EL P+ G++V+LSN YS
Sbjct: 481 EAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYS 540
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ ++ + +R + + KK PGC IE++G +H FV
Sbjct: 541 AAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILV 600
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+ P+ S VL D++EEEKE AL H+EKLAI +G++S I + KNLRVC D
Sbjct: 601 GIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGD 660
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHT IS V R +V D NRFHHFKNG CSC DFW
Sbjct: 661 CHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 26/192 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTG-DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
+V S +A LLF+ + +GL ++ S L AC L L +G LH + K +
Sbjct: 199 FVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHA 258
Query: 60 DVGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
D+ G MA+KD ++ +AL+ G+ +A F +MQ
Sbjct: 259 DLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQ 318
Query: 98 IRGVKPDAITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
V+PDA T V ++ ACSH A L R SH +++ SI L+ + + GR
Sbjct: 319 ACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSI--CNALIDMYAKCGR 376
Query: 157 IAKAEELIKNMP 168
I + ++ MP
Sbjct: 377 IDLSRQVFNMMP 388
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 263 bits (673), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 138/380 (36%), Positives = 211/380 (55%), Gaps = 47/380 (12%)
Query: 20 KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIM-KKNIEVDVGLGMAL----------- 67
+G++ D++ ++ L AC L AL G +H + + ++ DV LG A+
Sbjct: 426 RGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLR 485
Query: 68 -----------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACS 116
+D ++ A++ A G+ + F M G + + F+ +L AC+
Sbjct: 486 DARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACA 545
Query: 117 HAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVL 176
HAGLV+ HF+ M+ +G+ P+ EHYGC+V +LGR GR+A A +++ MP+ D
Sbjct: 546 HAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATW 605
Query: 177 GGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAER 236
L+GACRI+ + E AA+++LEL ++ +YV L N YS++ +W+ +R++MA+
Sbjct: 606 MALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCNIYSAAGRWEDAAAVRKIMADL 665
Query: 237 NIKKPPGCILIEVDGVVHEFV------------------------KAGFVPNKSEVLFDM 272
++K PG IE+ VHEFV +AG+ EVL D+
Sbjct: 666 GLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVLHDV 725
Query: 273 DEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVV 332
+EE+KE L H+EKLAI FG++S G +R+IKNLRVC DCH A+ ISKV+ RE VV
Sbjct: 726 EEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGREIVV 785
Query: 333 MDRNRFHHFKNGSCSCKDFW 352
D RFHHFK+G+CSC D+W
Sbjct: 786 RDVRRFHHFKDGACSCGDYW 805
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 80/193 (41%), Gaps = 26/193 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACT-----------HLGALEVGMWLH 49
YV A+ LF + +G+ D + VS+L AC+ H A+E G+ L
Sbjct: 103 YVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQ 162
Query: 50 PYIMKKNIEVDVGLGMALKD-------------VMTLTALIVVLAMCGQGNKALEYFYEM 96
+ + + G +L+D V+ A+I + G +ALE FY M
Sbjct: 163 EIVASALVSM-YGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRM 221
Query: 97 QIRGVKPDAITFVGVLVACSHA-GLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
G+ PD +TFV V ACS + L ++ F+ ++ G+ + LV R G
Sbjct: 222 LQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCG 281
Query: 156 RIAKAEELIKNMP 168
I A E MP
Sbjct: 282 EIDCAREFFAAMP 294
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 10/220 (4%)
Query: 59 VDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHA 118
+DV +A K ++ T LI G A+ F+ + G+ DAI FV VL ACS
Sbjct: 82 IDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSE 141
Query: 119 G-LVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLG 177
L R+ H + G++ + LV + GR G + A L ++ LD +
Sbjct: 142 EFLAAGRLIHRCAVEAGLGLQEIVA--SALVSMYGRCGSLRDANALFGHLERHLDVVLWN 199
Query: 178 GLLGACRIHDNLEAAERAAQQLLEL-LPDNGGSYVILSNRYSSSRKWK--KVKRIRELMA 234
++ A + + A ++L+L +P + ++V + SSS + +VK +
Sbjct: 200 AMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHTCLD 259
Query: 235 ERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFDMDE 274
E + G ++ +V+ + + G + E M E
Sbjct: 260 ETGL----GSDVVVATALVNAYARCGEIDCAREFFAAMPE 295
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 3/123 (2%)
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC-SHAGLVDERISH 127
D +TA+I V A C + + RG+ PD I ++ L AC S A L + R H
Sbjct: 396 DAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIH 455
Query: 128 FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHD 187
+ +++ R + +V + G+ G + A + MP A D +L A H
Sbjct: 456 ACVAADRRLDR-DVTLGNAIVSMYGQCGSLRDARDAFDGMP-ARDEISWNAMLSASAQHG 513
Query: 188 NLE 190
+E
Sbjct: 514 RVE 516
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 3 EDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGM--WLHPYIMKKNIEVD 60
++ + EAL +F + G+ D VT VS+ AC+ +L H + +
Sbjct: 207 QNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHTCLD------E 260
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
GLG DV+ TAL+ A CG+ + A E+F M R +A+++ ++ A + G
Sbjct: 261 TGLG---SDVVVATALVNAYARCGEIDCAREFFAAMPER----NAVSWTSMIAAFAQIG 312
>gi|242072952|ref|XP_002446412.1| hypothetical protein SORBIDRAFT_06g015580 [Sorghum bicolor]
gi|241937595|gb|EES10740.1| hypothetical protein SORBIDRAFT_06g015580 [Sorghum bicolor]
Length = 317
Score = 263 bits (673), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 126/312 (40%), Positives = 189/312 (60%), Gaps = 24/312 (7%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
M+L++ ++ +I + G+G +AL+ F +M+ G+KP+ +TF+GVL ACSH GLV+E
Sbjct: 6 MSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEG 65
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACR 184
+S+F MS YG+ P+ +HY C+V ILGRAG++ +A + MP+ D V LL AC+
Sbjct: 66 LSYFKSMSNVYGLNPTPDHYACVVDILGRAGQLDRARRFVDEMPITADAMVWRTLLSACK 125
Query: 185 IHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGC 244
+H N+E E AA+ LLEL P + SYV+LSN Y+ + KW ++R++M +R I+K PG
Sbjct: 126 VHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGR 185
Query: 245 ILIEVDGVVHEF------------------------VKAGFVPNKSEVLFDMDEEEKETA 280
IE VH F K G+ K + + ++E+K+
Sbjct: 186 SWIEAKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLAKIGYKQEKPNLFHEKEQEQKDPT 245
Query: 281 LNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHH 340
+H+EKLA+ FGL++ P + +R+IKNLRVC+DCH+ S+V RE V+ D RFHH
Sbjct: 246 AFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKFTSEVTRREIVLRDVYRFHH 305
Query: 341 FKNGSCSCKDFW 352
F +GSCSC D+W
Sbjct: 306 FNSGSCSCGDYW 317
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EAL LF +++ +GL + VT + +L AC+H+G +E G+ Y K++ GL
Sbjct: 29 EALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGL---SYF--KSMSNVYGLNPTPD 83
Query: 69 DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC 115
++ +L GQ ++A + EM I DA+ + +L AC
Sbjct: 84 H---YACVVDILGRAGQLDRARRFVDEMPITA---DAMVWRTLLSAC 124
>gi|296086445|emb|CBI32034.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 263 bits (673), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 153/386 (39%), Positives = 227/386 (58%), Gaps = 44/386 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGM---------WLHPYIMKKNIE 58
+ AL LF E+Q K D T+ S+ AC +G+L +G+ + Y ++E
Sbjct: 211 DAALNLFGEMQ-KFFEPDGYTIQSIANACAGMGSLSLGIVNDVLLNTSLVDMYCKCGSLE 269
Query: 59 VDVGL--GMALKDVMTLTALIVVLAMCGQGNKALEYFYEM-QIRGVKPDAITFVGVLVAC 115
+ + L M +DV + ++I+ + G+ ALEYF M + + P+AITFVGVL AC
Sbjct: 270 LALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPNAITFVGVLSAC 329
Query: 116 SHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFV 175
+H GLV E +F++M +Y I+P +EHYGCLV +L RAG I +A +++ NMPM D +
Sbjct: 330 NHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDVVSNMPMRPDLVI 389
Query: 176 LGGLLGAC-RIHDNLEAAERAAQQLLELLPDNG---GSYVILSNRYSSSRKWKKVKRIRE 231
LL AC + + +E +E A+++LE + G G YV+LS Y+S+ +W V +R+
Sbjct: 390 WRSLLDACCKQNAGVELSEEMARRVLE--AEGGVCSGVYVLLSRVYASASRWNDVGMVRK 447
Query: 232 LMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGFVPNKSE 267
LM ++ + K PGC IE+DGV HEF + G+ P+ S+
Sbjct: 448 LMTDKGVVKEPGCSSIEIDGVAHEFFAGDTSHPQTEEIYSALDVIEERVERVGYSPDSSQ 507
Query: 268 V-LFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVY 326
+ D + K+ +L LH+E+LAI FGL+ PG+ IRI KNLRVCN+CH T +IS+V+
Sbjct: 508 APMVDETIDGKQYSLRLHSERLAIAFGLLKTKPGMPIRIFKNLRVCNNCHQVTKLISRVF 567
Query: 327 NRETVVMDRNRFHHFKNGSCSCKDFW 352
NRE +V DR RFHHFK+G+CSC D+W
Sbjct: 568 NREIIVRDRIRFHHFKDGACSCMDYW 593
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 68/179 (37%), Gaps = 35/179 (19%)
Query: 12 LLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG------- 64
L R ++ + DK T +L AC +L AL G +H I+K + DV +
Sbjct: 114 LYHRMLEQGSVMQDKHTFPFVLKACAYLFALSEGEQIHAQILKLGFDSDVYINNSLVHFY 173
Query: 65 ---------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFV 109
M+ + +++ +I G+ + AL F EMQ + +PD T
Sbjct: 174 ATCDRLDFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQ-KFFEPDGYTIQ 232
Query: 110 GVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
+ AC+ G S GI + LV + + G + A +L MP
Sbjct: 233 SIANACAGMG------------SLSLGIVNDVLLNTSLVDMYCKCGSLELALQLFHRMP 279
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 263 bits (672), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 150/400 (37%), Positives = 212/400 (53%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLH--PYIMKKNIE 58
Y + +A+ + + +GL + T VS+L AC + AL+ G +H ++ +E
Sbjct: 238 YARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLE 297
Query: 59 VDVGLGMALK----------------------DVMTLTALIVVLAMCGQGNKALEYFYEM 96
DV + AL D++ +LI A GQ KALE F M
Sbjct: 298 SDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERM 357
Query: 97 QIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
++ G++P ITF VL ACSHAG++D+ HF +GI P EH+GC+V +LGRAG
Sbjct: 358 RLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGW 417
Query: 157 IAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNR 216
I +E+L+ +MP LGACR + N++ A AA+ L +L P YV+LSN
Sbjct: 418 IVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNM 477
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+ + +W V R+R+ M K G IEV VHEF+
Sbjct: 478 YAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRL 537
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+AG+VP+ VL D+ +E KE + H+EKLA+ F L++ G IR++KNLRVC
Sbjct: 538 TKLMKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVC 597
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
NDCHTA+ ISK+ NRE VV D NRFH F+NG+CSC D+W
Sbjct: 598 NDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 90/215 (41%), Gaps = 24/215 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL LFR++ G+ +KVT+VS L AC LG L G +H + + I+
Sbjct: 137 YARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSG 196
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL K+V+ +A+ A + A+ + M +
Sbjct: 197 VVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDL 256
Query: 99 RGVKPDAITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G+ P++ TFV VL AC+ A L R H G+ + LV + + G +
Sbjct: 257 EGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNL 316
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAA 192
A A ++ + LD + L+ H E A
Sbjct: 317 ALAGDMFDKIAH-LDLVLWNSLIATNAQHGQTEKA 350
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 35/190 (18%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE-- 58
Y+ + + L FR + +G+ +V + L ACT + +G + I+ IE
Sbjct: 36 YIGNRDFDRCWLFFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEE 95
Query: 59 --------------------VDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V L M+ +DV+ +A++ A G +AL F +M +
Sbjct: 96 SIVQTALVSMYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDL 155
Query: 99 RGVKPDAITFVGVLVACSHAG------LVDERISHFNLMSEKYGIRPSIEHYGCLVYILG 152
GV P+ +T V L AC+ G L+ +R+ E GI+ + LV + G
Sbjct: 156 DGVAPNKVTLVSGLDACASLGDLRSGALMHQRV-------EAQGIQSGVVVGTALVNLYG 208
Query: 153 RAGRIAKAEE 162
+ GRI A E
Sbjct: 209 KCGRIEAAVE 218
>gi|296084769|emb|CBI25911.3| unnamed protein product [Vitis vinifera]
Length = 288
Score = 263 bits (672), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 124/288 (43%), Positives = 184/288 (63%), Gaps = 24/288 (8%)
Query: 89 ALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLV 148
AL++F + G +PD ITFVGVL AC+HAGLVD+ + +F+ + EK+G+ + +HY CL+
Sbjct: 1 ALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLI 60
Query: 149 YILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGG 208
+L R+GR+ +AE++I MP+ D F+ LLG CRIH NL+ A+RAA+ L E+ P+N
Sbjct: 61 DLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIEPENPA 120
Query: 209 SYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV----------- 257
+Y L+N Y+++ W V +R++M R + K PG IE+ VH F+
Sbjct: 121 TYTTLANIYATAGLWGGVAEVRKVMDARGVVKKPGLSWIEIKREVHVFLVGDTSHAKSKE 180
Query: 258 -------------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIR 304
+ G+VP+ + VL D++EE+KE L+ H+EKLA+ FG++S G LI+
Sbjct: 181 IHEFLGKLSKRMKEEGYVPDTNFVLHDVEEEQKEQNLSYHSEKLAVAFGIISTPAGTLIK 240
Query: 305 IIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ KNLR C DCHTA ISK+ R+ +V D NRFH F++GSCSC+D+W
Sbjct: 241 VFKNLRTCVDCHTAIKFISKIAKRKIIVRDSNRFHCFEDGSCSCRDYW 288
>gi|302820671|ref|XP_002992002.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
gi|300140244|gb|EFJ06970.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
Length = 620
Score = 263 bits (672), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 213/398 (53%), Gaps = 48/398 (12%)
Query: 3 EDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN-IEVDV 61
+D + A F+E++ +G+ +VT VS L AC + LE G +H +E +
Sbjct: 223 KDGSGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSL 282
Query: 62 GLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
LG M K +++ +LIV A G +AL EM ++
Sbjct: 283 VLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQ 342
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G PD+ T V +L SHAGL++ + HF + +G+ PS CLV +L R G +
Sbjct: 343 GFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDA 402
Query: 160 AEELIKNMPM-ALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
AEELI P D LL AC+ + + + R A+++ EL P + GS+V+L+N Y+
Sbjct: 403 AEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYA 462
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S +W RIR++M ++KK PGC IE+ G VHEF+
Sbjct: 463 SVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEELEKLTL 522
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+VP+ + V+ D++E +KE L+ H+E+LAI FGL+S PG IR++KNLRVC+D
Sbjct: 523 RMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCSD 582
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT IIS V RE VV D +RFHHFK+G CSC DFW
Sbjct: 583 CHAATKIISSVVGREIVVRDSSRFHHFKHGQCSCGDFW 620
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 263 bits (672), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 149/400 (37%), Positives = 213/400 (53%), Gaps = 49/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ + +A+ L + +G D T ++L AC + LE GM +H ++ +E D
Sbjct: 383 YIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESD 442
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL +++ + ++I A G G+ AL F M++
Sbjct: 443 VVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKL 502
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G PD ITFVGVL ACSH GLVDE +F M+E YG+ P +EHY C+V +LGRAG +
Sbjct: 503 SGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELD 562
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHD--NLEAAERAAQQLLELLPDNGGSYVILSNR 216
K E I MP+ + + +LGAC + E RAA+ L + P N +YV+LSN
Sbjct: 563 KIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNM 622
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+S KW+ + R R M E +KK GC + + VH FV
Sbjct: 623 YASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKEL 682
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
AG+VP L+D++ E KE L+ H+EKLA+ F +++ G+ IRI+KNLRVC
Sbjct: 683 DKKIRDAGYVPQIKFALYDLEPENKEELLSYHSEKLAVAF-VLTRNSGLPIRIMKNLRVC 741
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+A ISKV +R V+ D NRFHHF++G CSC+D+W
Sbjct: 742 GDCHSAFKYISKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 27/206 (13%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E+A+ + ++ GL ++S L +C LG + +G H +K +++DV + L
Sbjct: 186 EDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTL 245
Query: 68 ----------------------KDVMTLTALIVVLAMCGQG-NKALEYFYEMQIRGVKPD 104
+D ++ +I LA G ++A+E F EM G P+
Sbjct: 246 LALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPN 305
Query: 105 AITFVGVLVACSHAGLVDERISH-FNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
+TF+ +L S L ++SH + + KY ++ L+ G++G + EE+
Sbjct: 306 RVTFINLLATVS--SLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEI 363
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNL 189
M D ++ IH+ L
Sbjct: 364 FSRMSERRDEVSWNSMISG-YIHNEL 388
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 263 bits (672), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 221/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ EEA L+F+++Q + D TMVSL+ AC+HL AL+ G H ++ + + +
Sbjct: 416 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASE 475
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL +D+++ +I + G G +A F EM
Sbjct: 476 TSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNN 535
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G PD +TF+ +L ACSH+GLV E F++M YG+ P +EHY C+V +L R G +
Sbjct: 536 LGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLD 595
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E I++MP+ D V LLGACR++ N++ ++ ++ + EL P+ G++V+LSN YS
Sbjct: 596 EAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYS 655
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ ++ + +R + + KK PGC IE++G +H FV
Sbjct: 656 AAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILV 715
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+ P+ S VL D++EEEKE AL H+EKLAI +G++S I + KNLRVC D
Sbjct: 716 GIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGD 775
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHT IS V R +V D NRFHHFKNG CSC DFW
Sbjct: 776 CHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 26/192 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTG-DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
+V S +A LLF+ + +GL ++ S L AC L L +G LH + K +
Sbjct: 314 FVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHA 373
Query: 60 DVGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
D+ G MA+KD ++ +AL+ G+ +A F +MQ
Sbjct: 374 DLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQ 433
Query: 98 IRGVKPDAITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
V+PDA T V ++ ACSH A L R SH +++ SI L+ + + GR
Sbjct: 434 ACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSI--CNALIDMYAKCGR 491
Query: 157 IAKAEELIKNMP 168
I + ++ MP
Sbjct: 492 IDLSRQVFNMMP 503
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 153/399 (38%), Positives = 223/399 (55%), Gaps = 52/399 (13%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ ++ LF+E + + D+VT+ S+L AC H+GAL++ W+ + +KNI++
Sbjct: 366 YAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKL 425
Query: 60 DVG----------------------LGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ M +DV++ LI A G G +A++ M+
Sbjct: 426 GISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTME 485
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G++PD +T++GVL ACSHAGL++E + F + P+++HY C+V +LGRAG +
Sbjct: 486 EEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGEL 540
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A+ LI++MPM V G LL A RIH + E AA +L EL P N G+YV+LSN Y
Sbjct: 541 DEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIY 600
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+S +W+ VKR+RE+M + +KK G +E G VH+F
Sbjct: 601 ASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELE 660
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ GFV +KS L D++EEEKE L H+EKLAI F L+ G IR++KNLR+C
Sbjct: 661 RKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICL 720
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTA +ISK+ RE VV D NRFH F G CSC D+W
Sbjct: 721 DCHTAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 153/399 (38%), Positives = 223/399 (55%), Gaps = 52/399 (13%)
Query: 1 YVEDSACEEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
Y ++ ++ LF+E + + D+VT+ S+L AC H+GAL++ W+ + +KNI++
Sbjct: 366 YAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKL 425
Query: 60 DVG----------------------LGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ M +DV++ LI A G G +A++ M+
Sbjct: 426 GISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTME 485
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G++PD +T++GVL ACSHAGL++E + F + P+++HY C+V +LGRAG +
Sbjct: 486 EEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGEL 540
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A+ LI++MPM V G LL A RIH + E AA +L EL P N G+YV+LSN Y
Sbjct: 541 DEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIY 600
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+S +W+ VKR+RE+M + +KK G +E G VH+F
Sbjct: 601 ASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELE 660
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ GFV +KS L D++EEEKE L H+EKLAI F L+ G IR++KNLR+C
Sbjct: 661 RKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICL 720
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHTA +ISK+ RE VV D NRFH F G CSC D+W
Sbjct: 721 DCHTAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/391 (36%), Positives = 217/391 (55%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGL-TGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
++ LF E++ KG+ D + S++ A +L L +G +H ++ E + + AL
Sbjct: 220 DSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNAL 279
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+D+++ T++IV A G +AL + M G+KP+
Sbjct: 280 VDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNE 339
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TFVG++ ACSH GLV + FN M + YGI PS++HY CL+ +L R+G + +AE LIK
Sbjct: 340 VTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIK 399
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP D LL AC H N R A LL L P++ +Y++LSN Y+S+ W+
Sbjct: 400 AMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWES 459
Query: 226 VKRIRELMAERNIKKPPG--CILI------------------EVDGVVHEF----VKAGF 261
V ++R LMA +KK PG CI++ E+ G++ E K G+
Sbjct: 460 VSKVRRLMAAMEVKKEPGYSCIVLGKESQVFLAGETSHPAKEEIFGLLEELDAEMKKRGY 519
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
+P+ S VL D++++EKE L H+E+LA+ +GL+ +PG+++ I+KNLRVC DCHT
Sbjct: 520 IPDTSSVLHDLEQQEKERQLFWHSERLAVAYGLLKGIPGMVLHIVKNLRVCGDCHTVLKF 579
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS + RE VV D NR+HHFK+G CSC +FW
Sbjct: 580 ISIIVKREIVVRDANRYHHFKDGKCSCNNFW 610
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/399 (36%), Positives = 216/399 (54%), Gaps = 48/399 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLH---------PY 51
Y +++ EEA+ F E+Q G+ D T+ S++ +C +L +LE G H Y
Sbjct: 354 YGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRY 413
Query: 52 IMKKNIEVDVGLG--------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
I N V + G M+ D ++ TAL+ A G+ + ++ F +M
Sbjct: 414 ITVSNALVTL-YGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKML 472
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G+KPD +TF+GVL ACS AGLV++ +F+ M + +GI P +HY C++ + R+GR
Sbjct: 473 ANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRF 532
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+AEE IK MP + D F LL +CR+ N+E + AA+ LLE P N SYV+L + +
Sbjct: 533 KEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMH 592
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF--------------------- 256
++ +W +V +R M +R +KK PGC I+ VH F
Sbjct: 593 AAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLN 652
Query: 257 ---VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ G+ P+ S VL D+ + +K ++ H+EKLAI FGL+ + IRI+KNLRVC
Sbjct: 653 SKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCV 712
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH AT ISK+ R+ +V D RFH F +G+CSC DFW
Sbjct: 713 DCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 23/181 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EAL +FR ++ +G+ D+ T S+L AC L ALE G +H YI + E +V +G AL
Sbjct: 261 EALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALV 320
Query: 69 D----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
D +++ TA+IV +A+ F EMQ+ G+KPD
Sbjct: 321 DMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDF 380
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
T V+ +C++ ++E + F+ ++ G+ I LV + G+ G I A L
Sbjct: 381 TLGSVISSCANLASLEEG-AQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDE 439
Query: 167 M 167
M
Sbjct: 440 M 440
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 218/398 (54%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ ++ +EAL LFRE+ GL D +VS LLAC +G L++G +H +I+++ +E
Sbjct: 288 FAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRR-LEFQ 346
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG A+ +D++ A+I G G+ AL F E+
Sbjct: 347 CILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQELNE 406
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD TF +L A SH+GLV+E F+ M ++GI P+ +H C+V +L R+G +
Sbjct: 407 TGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSGLVE 466
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E++ +M + LL C + LE E A+++LE P++ G ++SN Y+
Sbjct: 467 EANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQPEDIGVLALVSNLYA 526
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+++KW KV+ IR+LM + KK PG LIEV G H FV
Sbjct: 527 AAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQHQEILKMISKLSF 586
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+VP V D+DE+ KE L+ H+E+LAI FGL++ PG + IIKNLRVC D
Sbjct: 587 EMRKMGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGD 646
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ISK+ +RE VV D RFHHFK+G+CSC D+W
Sbjct: 647 CHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 684
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 22/135 (16%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EAL ++ ++ G+ D+V MV ++ ACT G +G +H ++ + +DV + +L
Sbjct: 195 EALGMYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLV 254
Query: 69 DV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
D+ ++ ALI A G ++AL+ F EM G++PD+
Sbjct: 255 DMYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSG 314
Query: 107 TFVGVLVACSHAGLV 121
V L+AC+ G +
Sbjct: 315 ALVSALLACADVGFL 329
>gi|293334473|ref|NP_001170726.1| uncharacterized protein LOC100384813 [Zea mays]
gi|238007188|gb|ACR34629.1| unknown [Zea mays]
Length = 329
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 129/312 (41%), Positives = 191/312 (61%), Gaps = 24/312 (7%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
M ++ ++ T+++ M G+G +AL+ F +MQ G PD I+F+ +L ACSH+G+VD+
Sbjct: 18 MPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQG 77
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACR 184
+++F++M Y + S EHY C++ +L R GR+ KA + I+ MPM + LL ACR
Sbjct: 78 LNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACR 137
Query: 185 IHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGC 244
+H N+E AE A +L+ + +N GSY ++SN Y+++R+WK V RIR+LM + IKK PGC
Sbjct: 138 VHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGC 197
Query: 245 ILIE-VDGVVHEFVK-----------------------AGFVPNKSEVLFDMDEEEKETA 280
++ G FV G+VP + L D+D+EEK
Sbjct: 198 SWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNL 257
Query: 281 LNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHH 340
L+ H+EKLA+ +GL++ PG IRI KNLRVC DCH+A ISK+ + E +V D +RFHH
Sbjct: 258 LSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIIVRDSSRFHH 317
Query: 341 FKNGSCSCKDFW 352
FKNGSCSC +W
Sbjct: 318 FKNGSCSCGGYW 329
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 11/108 (10%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+EAL +F ++Q G D ++ + LL AC+H G ++ G+ IM+++ +V +
Sbjct: 40 KEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFD-IMRRDYDV-------V 91
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC 115
+I +LA CG+ +KA + EM + +P A+ +V +L AC
Sbjct: 92 ASAEHYACVIDLLARCGRLDKAWKTIQEMPM---EPSAVIWVALLSAC 136
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/403 (36%), Positives = 226/403 (56%), Gaps = 55/403 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------ 54
Y+++ E AL LFR++ G+ +++M+S+ AC+ L +L +G H Y +K
Sbjct: 570 YLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDN 629
Query: 55 ------------KNIEV----DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
KN V V G+ + V + A+++ + G+ +A++ F EMQ
Sbjct: 630 AFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQR 689
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G PD +TF+GVL AC+H+GLV E +++ + M +G+ P+++HY C++ +L RAG++
Sbjct: 690 TGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLD 749
Query: 159 KA-----EELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVIL 213
+A EE+ + + + +F LL +CRIH NLE E+ A +L P+ +YV+L
Sbjct: 750 EALKIATEEMSEEPGVGIWNF----LLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLL 805
Query: 214 SNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------- 257
SN Y+ S KW +V+++R+ M E +++K GC IE++G V FV
Sbjct: 806 SNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNGKVFSFVAGESSLDGFEEIKSLW 865
Query: 258 --------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNL 309
K G+ P+ S V D+ EEEK L H+EKLAIT+GL+ G +R+ KNL
Sbjct: 866 SVLEREIGKMGYRPDTSSVQHDLSEEEKTEQLRGHSEKLAITYGLIRTSEGTTLRVYKNL 925
Query: 310 RVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
R+C DCH A +ISKV RE VV D RFHHFKNG CSC D+W
Sbjct: 926 RICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGFCSCGDYW 968
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 22/138 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + S +L + +++ GL D T+ SLL AC+ + +L++G +H I++ +E D
Sbjct: 469 YSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERD 528
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ ++L K +++ ++ G +AL F +M +
Sbjct: 529 SFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVL 588
Query: 99 RGVKPDAITFVGVLVACS 116
GV+P I+ + V ACS
Sbjct: 589 YGVQPCEISMMSVFGACS 606
>gi|357133649|ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Brachypodium distachyon]
Length = 610
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/399 (35%), Positives = 216/399 (54%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLT-GDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
+V A+ LF +++ G++ D + S + L A +G LH M+
Sbjct: 212 FVRSGESVSAVKLFVDMRRDGVSIDDAFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSS 271
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ +G A+ +D+++ T ++V A G+ +A + M
Sbjct: 272 SMIVGNAVVDMYSKCSDIHSAREVFEEITGRDIISWTTMLVGEAQHGRAEEAFSLYDRMV 331
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+ GVKP+ +TFVG++ ACSHAGLV + F+ M +YGI P ++HY C + +L R+G +
Sbjct: 332 LAGVKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKGEYGINPRLQHYTCYLDLLSRSGHL 391
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
A+AEELI MP D LL AC+ ++N E + R A LLEL P +YV+LSN Y
Sbjct: 392 AEAEELITTMPYVPDEATWASLLSACKKYNNAEMSIRVADNLLELRPKYPSTYVLLSNVY 451
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEV------------------------DGVV 253
+ + KW V +R+LMA+ I+K PG IEV + +V
Sbjct: 452 AVNGKWDSVDTVRKLMADMEIRKEPGYSWIEVGREFRLFHAGEVPIDLREEILGFLEELV 511
Query: 254 HEFVKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
E + G+VP+ S V+ D++E EKE L LH+E+LA+ FG++ G +IR++KNLRVCN
Sbjct: 512 SEMRQRGYVPDTSSVMHDLEEHEKEHHLCLHSERLAVAFGILRSPLGSVIRVVKNLRVCN 571
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHT IS+++ R+ +V D +RFHHF+ G CSC +FW
Sbjct: 572 DCHTVMKFISEIFQRKIIVRDASRFHHFEGGKCSCSEFW 610
>gi|220061997|gb|ACL79586.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
Length = 587
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/376 (37%), Positives = 212/376 (56%), Gaps = 53/376 (14%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKD--------------- 69
++VT+V+ L AC +G L+ GM++H + + ++ +V + +L D
Sbjct: 217 NEVTIVAALSACAQIGLLKDGMYVHEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVF 276
Query: 70 ---------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+++ A I +M G G AL F EM R ++PD +T++ VL C+H+GL
Sbjct: 277 HSIKPEDQTLVSYNAAIQAHSMHGHGGDALRLFDEMPTR-IEPDGVTYLAVLCGCNHSGL 335
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLL 180
VD+ + FN M + P+++HYG +V +LGRAGR+ +A + + +MP D + LL
Sbjct: 336 VDDGLRVFNSMR----VAPNMKHYGTIVDLLGRAGRLTEAYDTVISMPFPADIVLWQTLL 391
Query: 181 GACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKK 240
GA ++H +E AE AA +L EL + G YV+LSN Y+S +W V R+R+ M +++K
Sbjct: 392 GAAKMHGVVELAELAANKLAELGSNVDGDYVLLSNVYASKARWMDVGRVRDTMRSNDVRK 451
Query: 241 PPGCILIEVDGVVHEFVKA------------------------GFVPNKSEVLFDMDEEE 276
PG E+DGV+H+F+ G+ P S VL D+ EEE
Sbjct: 452 VPGFSYTEIDGVMHKFINGDKEHPRWQEIYRALEDIVSRISELGYEPETSNVLHDIGEEE 511
Query: 277 KETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRN 336
K+ AL H+EKLAI FGL++ PG +R+IKNLR+C DCH +ISK Y R V+ DR
Sbjct: 512 KQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLISKAYGRVIVIRDRA 571
Query: 337 RFHHFKNGSCSCKDFW 352
RFH F++G CSC+D+W
Sbjct: 572 RFHRFEDGQCSCRDYW 587
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/398 (35%), Positives = 220/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EEAL LF +++ + ++ TM L + L AL +G LH K ++ +
Sbjct: 300 YFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGN 359
Query: 61 VGLGMALK----------------------DVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL +++T A+I + G G +AL F +M
Sbjct: 360 VMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMA 419
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G +P+ +TF+GV++AC+H LVDE +FN + +++ I P +EHY C+V +L R+GR+
Sbjct: 420 TGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLD 479
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE +++ + D LL AC +H + + + A+ LL+L P + G+Y++LSN ++
Sbjct: 480 EAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMHA 539
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
R+W V IR+LM ERN+KK PG +E+ V H F
Sbjct: 540 RVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLS 599
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+VP+ VL D+++E+K L+ H+EKLA+ +GL+ G I +IKNLR+C+D
Sbjct: 600 KIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPITVIKNLRMCDD 659
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHTA +ISKV NR VV D NRFHHF+NG CSC D+W
Sbjct: 660 CHTAIKLISKVANRVIVVRDANRFHHFQNGCCSCGDYW 697
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 217/384 (56%), Gaps = 47/384 (12%)
Query: 16 EVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-------- 67
+++ + D T + L C L A +G +H +++ E ++ +G AL
Sbjct: 499 QMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCG 558
Query: 68 --------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLV 113
+DV+T T +I M G+G KALE F +M+ G+ PD++ F+ ++
Sbjct: 559 CLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIY 618
Query: 114 ACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDH 173
ACSH+GLVDE ++ F M Y I P IEHY C+V +L R+ +I+KAEE I+ MP+ D
Sbjct: 619 ACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDA 678
Query: 174 FVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELM 233
+ +L ACR ++E AER +++++EL PD+ G ++ SN Y++ RKW KV IR+ +
Sbjct: 679 SIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSL 738
Query: 234 AERNIKKPPGCILIEVDGVVHEF------------------------VKAGFVPNKSEVL 269
+++I K PG IEV VH F K G++P+ EV
Sbjct: 739 KDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVS 798
Query: 270 FDM-DEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNR 328
++ +EEEK + H+E+LAI FGL++ PG ++++KNLRVC DCH T +ISK+ R
Sbjct: 799 QNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGR 858
Query: 329 ETVVMDRNRFHHFKNGSCSCKDFW 352
E +V D NRFH FK+G+CSCKD W
Sbjct: 859 EILVRDANRFHLFKDGTCSCKDRW 882
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 13/122 (10%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E+AL F +++ G+ D V ++++ AC+H G ++ G+ MK + ++D
Sbjct: 592 EKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEK-MKTHYKID------- 643
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD--ERI 125
+ ++ +L+ + +KA E+ M I KPDA + VL AC +G ++ ER+
Sbjct: 644 PMIEHYACVVDLLSRSQKISKAEEFIQAMPI---KPDASIWASVLRACRTSGDMETAERV 700
Query: 126 SH 127
S
Sbjct: 701 SR 702
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 22/128 (17%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL + +++ ++ DK T S++ AC L E+G ++ I+ E D+ +G AL
Sbjct: 89 EALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALV 148
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+D+++ +LI + G +ALE ++E++ + PD+
Sbjct: 149 DMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSF 208
Query: 107 TFVGVLVA 114
T VL A
Sbjct: 209 TVSSVLPA 216
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 13/119 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y++ EA+ LF+ + D +T + L+ T L L+ G LH +K I +D
Sbjct: 383 YIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICID 442
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
+ + ALI + A CG+ +L+ F M D +T+ V+ AC G
Sbjct: 443 LSVS---------NALIDMYAKCGEVGDSLKIFSSMGT----GDTVTWNTVISACVRFG 488
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/391 (36%), Positives = 215/391 (54%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEAL +F + +G+ + T S + A + ++ G +H I K + + + AL
Sbjct: 674 EEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAL 733
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
K+ ++ A+I + G G++AL+ F +M V+P+
Sbjct: 734 ISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNH 793
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+T VGVL ACSH GLVD+ I++F M+ +YG+ P EHY C+V +L RAG +++A+E I+
Sbjct: 794 VTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQ 853
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP+ D V LL AC +H N+E E AA LLEL P++ +YV+LSN Y+ S+KW
Sbjct: 854 EMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDA 913
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
R+ M E+ +KK PG IEV +H F + G+
Sbjct: 914 RDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGY 973
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
V + +L ++ E+K+ + +H+EKLAI+FGL+S V I ++KNLRVCNDCH
Sbjct: 974 VQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKF 1033
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+SKV NRE +V D RFHHF+ G+CSCKD+W
Sbjct: 1034 VSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 29/226 (12%)
Query: 7 CE-EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL-- 63
CE EA+ LF ++ G+ S+L AC + +LE+G LH ++K D +
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 327
Query: 64 --------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
M+ +D +T LI L+ CG G KA+E F M + G++P
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 387
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
D+ T ++VACS G + R + + K G + + G L+ + + I A +
Sbjct: 388 DSNTLASLVVACSADGTL-FRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 164 IKNMPMALDHFVLGG-LLGACRIHDNLEAAERAAQQLL--ELLPDN 206
+ +++ VL +L A + D+L + R +Q+ E++P+
Sbjct: 447 F--LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 102/246 (41%), Gaps = 28/246 (11%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV---------- 59
+ +FR++Q + + ++ T S+L C LG LE+G +H I+K N ++
Sbjct: 474 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 533
Query: 60 ------------DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
D+ + A KDV++ T +I +KAL F +M RG++ D +
Sbjct: 534 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 593
Query: 108 FVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ AC+ + E + + G + LV + R G+I ++ L
Sbjct: 594 LTNAVSACAGLQALKEG-QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES-YLAFEQ 651
Query: 168 PMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNG----GSYVILSNRYSSSRKW 223
A D+ L+ + N E A R ++ DN GS V ++ ++ ++
Sbjct: 652 TEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQG 711
Query: 224 KKVKRI 229
K+V +
Sbjct: 712 KQVHAV 717
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 69/184 (37%), Gaps = 23/184 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + ++AL FR++ +G+ D+V + + + AC L AL+ G +H D
Sbjct: 566 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSD 625
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL D + AL+ G +AL F M
Sbjct: 626 LPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNR 685
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ + TF + A S + + + + K G E L+ + + G I+
Sbjct: 686 EGIDNNNFTFGSAVKAASETANMKQG-KQVHAVITKTGYDSETEVCNALISMYAKCGSIS 744
Query: 159 KAEE 162
AE+
Sbjct: 745 DAEK 748
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/391 (36%), Positives = 215/391 (54%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEAL +F + +G+ + T S + A + ++ G +H I K + + + AL
Sbjct: 634 EEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAL 693
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
K+ ++ A+I + G G++AL+ F +M V+P+
Sbjct: 694 ISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNH 753
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+T VGVL ACSH GLVD+ I++F M+ +YG+ P EHY C+V +L RAG +++A+E I+
Sbjct: 754 VTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQ 813
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP+ D V LL AC +H N+E E AA LLEL P++ +YV+LSN Y+ S+KW
Sbjct: 814 EMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDA 873
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
R+ M E+ +KK PG IEV +H F + G+
Sbjct: 874 RDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGY 933
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
V + +L ++ E+K+ + +H+EKLAI+FGL+S V I ++KNLRVCNDCH
Sbjct: 934 VQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKF 993
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+SKV NRE +V D RFHHF+ G+CSCKD+W
Sbjct: 994 VSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1024
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 29/226 (12%)
Query: 7 CE-EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL-- 63
CE EA+ LF ++ G+ S+L AC + +LE+G LH ++K D +
Sbjct: 228 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 287
Query: 64 --------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
M+ +D +T LI L+ CG G KA+E F M + G++P
Sbjct: 288 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 347
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
D+ T ++VACS G + R + + K G + + G L+ + + I A +
Sbjct: 348 DSNTLASLVVACSADGTL-FRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 406
Query: 164 IKNMPMALDHFVLGG-LLGACRIHDNLEAAERAAQQLL--ELLPDN 206
+ +++ VL +L A + D+L + R +Q+ E++P+
Sbjct: 407 F--LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 450
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 102/246 (41%), Gaps = 28/246 (11%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV---------- 59
+ +FR++Q + + ++ T S+L C LG LE+G +H I+K N ++
Sbjct: 434 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 493
Query: 60 ------------DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
D+ + A KDV++ T +I +KAL F +M RG++ D +
Sbjct: 494 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 553
Query: 108 FVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+ AC+ + E + + G + LV + R G+I ++ L
Sbjct: 554 LTNAVSACAGLQALKEG-QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES-YLAFEQ 611
Query: 168 PMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNG----GSYVILSNRYSSSRKW 223
A D+ L+ + N E A R ++ DN GS V ++ ++ ++
Sbjct: 612 TEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQG 671
Query: 224 KKVKRI 229
K+V +
Sbjct: 672 KQVHAV 677
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 69/184 (37%), Gaps = 23/184 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + ++AL FR++ +G+ D+V + + + AC L AL+ G +H D
Sbjct: 526 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSD 585
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL D + AL+ G +AL F M
Sbjct: 586 LPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNR 645
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ + TF + A S + + + + K G E L+ + + G I+
Sbjct: 646 EGIDNNNFTFGSAVKAASETANMKQG-KQVHAVITKTGYDSETEVCNALISMYAKCGSIS 704
Query: 159 KAEE 162
AE+
Sbjct: 705 DAEK 708
>gi|413945386|gb|AFW78035.1| hypothetical protein ZEAMMB73_343828 [Zea mays]
Length = 608
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/390 (35%), Positives = 220/390 (56%), Gaps = 47/390 (12%)
Query: 10 ALLLFREVQHKGL-TGDKVTMVSLLLACTHLGALEVGMWLHPYIMK---------KNIEV 59
A+ LF E++ + D + +++ L AL +G LH ++M+ N V
Sbjct: 219 AMGLFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGRQLHGFVMRLGFLSSMIVGNALV 278
Query: 60 D-------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
D V G+ ++DV++ T ++V A G+ + + M + G+KP+ +
Sbjct: 279 DMYSKCSDIHSAREVFEGITVRDVISWTTILVGEAQHGRAEEVFALYNRMLLAGMKPNEV 338
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFVG++ ACSHAGLV + F+ M +YG++P ++HY C + +L R+G +++AE+LI
Sbjct: 339 TFVGLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQHYTCYLDLLSRSGYLSEAEKLITT 398
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP D G LL AC+ H++ + R A LLEL P + +Y++LSN Y+ + KW V
Sbjct: 399 MPYEPDEATWGALLSACKKHNDTQMCLRVADNLLELRPKDPSTYILLSNVYAVNCKWDSV 458
Query: 227 KRIRELMAERNIKKPPGCILIE------------------------VDGVVHEFVKAGFV 262
++R++MAE I+K PG +E ++ +V E K G+V
Sbjct: 459 AKVRKIMAEMEIRKVPGYSWVEAGRESRIFHAGEVPLDVGEEITCFLEELVSEMRKRGYV 518
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ S V+ D++E EKE L +H+E+LA+ FG++ PG +IR++KNLRVC DCHT I
Sbjct: 519 PDTSSVMHDLEEHEKEQHLFVHSERLAVAFGILKSPPGSVIRVVKNLRVCGDCHTVMKFI 578
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S + R+ +V D +RFHHF++G+CSC +FW
Sbjct: 579 SAIAQRKIIVRDASRFHHFEDGNCSCSEFW 608
>gi|296089328|emb|CBI39100.3| unnamed protein product [Vitis vinifera]
Length = 483
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/378 (39%), Positives = 210/378 (55%), Gaps = 64/378 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMV--SLLLACTHLGALEVGMWLHPYIMKKNIE 58
Y +++ ++A+ LF+ +Q +G+ ++ MV + + LG V M+ + K +
Sbjct: 144 YAQNNHFDKAVELFKVLQSQGVRANETVMVIKNGMTLNLILGTALVDMYARCGSIDKAVW 203
Query: 59 VDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHA 118
V L +D ++ TALI LAM G ++L+YF M G+ P ITF VL ACSH
Sbjct: 204 VFEDL--PERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHG 261
Query: 119 GLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGG 178
GL++E AE + MP+ + V G
Sbjct: 262 GLLEE------------------------------------AERFVLKMPVKPNAPVWGA 285
Query: 179 LLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNI 238
LLGACRIH N E ER + L++LLP + G YV+LSN Y+++++W+KV +R++M + +
Sbjct: 286 LLGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGL 345
Query: 239 KKPPGCILIEVDGVVHEFV------------------------KAGFVPNKSEVLFDMDE 274
KKPPG LIE+DG VH+F AG+ N ++ LFD+DE
Sbjct: 346 KKPPGHSLIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTADALFDIDE 405
Query: 275 EEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMD 334
EEKE+AL+ H+EKLAI FG++ G IRI+KNLRVC DCHTAT +ISKV+ RE +V D
Sbjct: 406 EEKESALHRHSEKLAIAFGMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELIVRD 465
Query: 335 RNRFHHFKNGSCSCKDFW 352
RNRFHHF+ G CSC D+W
Sbjct: 466 RNRFHHFRQGLCSCMDYW 483
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/400 (35%), Positives = 214/400 (53%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGA-LEVGMWLHPYIMKKNIEV 59
Y + E A+ +F E+ G+ ++ T S+L C A + G H + +K ++
Sbjct: 73 YAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDS 132
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ + AL KD+++ ++I A GQ KAL+ F EM+
Sbjct: 133 SLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMK 192
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
R VK D +TF+GV AC+HAGLV+E +F++M I P+ EH C+V + RAG++
Sbjct: 193 KRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQL 252
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA ++I+NMP + +L ACR+H E AA++++ + P++ +YV+LSN Y
Sbjct: 253 EKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMY 312
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
+ S W++ ++R+LM ERN+KK PG IEV + F+
Sbjct: 313 AESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLS 372
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+ P+ S VL D+D+E KE L H+E+LAI FGL++ G + IIKNLRVC
Sbjct: 373 TRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCG 432
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHF-KNGSCSCKDFW 352
DCH +I+K+ RE VV D NRFHHF +G CSC DFW
Sbjct: 433 DCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 472
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 49/102 (48%)
Query: 64 GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE 123
G+ KD++ +A++ A G+ A++ F E+ G+KP+ TF +L C+
Sbjct: 57 GIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMG 116
Query: 124 RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+ F+ + K + S+ L+ + + G I AEE+ K
Sbjct: 117 QGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFK 158
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/399 (36%), Positives = 216/399 (54%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ EEALL+FR Q G D + S + AC L L G +H K +
Sbjct: 220 YVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSN 279
Query: 61 VGLGMALKD-----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ + +L D ++ A+I A + +A+ F +MQ
Sbjct: 280 IYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQ 339
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
RG PD +T+V VL ACSH GL +E +F+LM ++ + PS+ HY C++ ILGRAG +
Sbjct: 340 QRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLV 399
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA +LI+ MP + G LL +C+I+ N+E AE AA+ L E+ P+N G++++L+N Y
Sbjct: 400 HKAYDLIERMPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIY 459
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
++++KW +V R R+L+ E +++K G IE+ +H F
Sbjct: 460 AANKKWDEVARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLV 519
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
K + + S L D++E K+ L H+EKLAITFGL+ + IRIIKNLR+C
Sbjct: 520 VELKKLNYKVDTSNDLHDVEENRKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRICG 579
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHT ++SK +RE +V D NRFHHFK+G CSC +FW
Sbjct: 580 DCHTFMKLVSKSTSREIIVRDTNRFHHFKDGFCSCGEFW 618
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 25/175 (14%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL L ++Q +G ++ T+ S+L C A+ M LH + +K I+ + +G AL
Sbjct: 127 EALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTALL 186
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
K+ +T ++++ G +AL F Q+ G D
Sbjct: 187 HVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPF 246
Query: 107 TFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA 160
+ AC+ A L++ + H +S K G +I L+ + + G I +A
Sbjct: 247 MISSAVSACAGLATLIEGKQVH--AISHKSGFGSNIYVSSSLIDMYAKCGCIREA 299
>gi|326532850|dbj|BAJ89270.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/374 (37%), Positives = 210/374 (56%), Gaps = 53/374 (14%)
Query: 27 VTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKD----------------- 69
VT+++ L AC +G+L+ G+ +H + K + +V + AL D
Sbjct: 212 VTIIAALSACAQIGSLQDGLCVHEFARKIGVGGNVRVCNALIDMYSKCGSLARALEVFHS 271
Query: 70 -------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
+++ I ++M G G AL+ F EM ++PD +T++ VL C+HAGLVD
Sbjct: 272 IKREDRTLVSYNTAIQAISMHGHGGDALKLFDEMPT-CIEPDEVTYIAVLCGCNHAGLVD 330
Query: 123 ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGA 182
E + F+ M + P+++HYG +V +LGRAGR+A+A + IK+MP D + LLGA
Sbjct: 331 EGLRVFHGMR----VPPNVKHYGTVVDLLGRAGRLAEAYDTIKSMPFPADIVLWQTLLGA 386
Query: 183 CRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPP 242
+ H ++E AE AA +L EL + G YV+LSN Y+S +W V R+R+ M +++K P
Sbjct: 387 SKTHGDVELAEVAATKLTELGSNVDGDYVLLSNVYASKARWADVGRVRDTMRSNDVRKVP 446
Query: 243 GCILIEVDGVVHEFVKA------------------------GFVPNKSEVLFDMDEEEKE 278
G E+ GV+H+F+ G+ P S VL D+ EEEK+
Sbjct: 447 GFSYTEISGVMHKFINGDKEHPRLQEIYRALGEIMSRIGELGYEPETSNVLHDIGEEEKQ 506
Query: 279 TALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRF 338
AL+ H+EKLAI FGL++ PG +R+IKN+R+C DCH +ISK Y R ++ DR RF
Sbjct: 507 YALSYHSEKLAIAFGLIATPPGETLRVIKNIRICGDCHVVAKLISKAYGRAIIIRDRARF 566
Query: 339 HHFKNGSCSCKDFW 352
H F++G CSC D+W
Sbjct: 567 HRFEDGQCSCSDYW 580
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 223/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ E+AL+LF+++ + G +VT S+L AC + ALE G +H +K + +
Sbjct: 423 YVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKN 482
Query: 61 VGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL D+ ++ A+I ++ G +AL+ F M
Sbjct: 483 TVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLE 542
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
KPD +TFVG+L ACS+AGL+D ++F M E+Y I P EHY C+V++LGR+G +
Sbjct: 543 TECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLD 602
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
KA +L+ +P V LL AC IH+++E +AQ++LE+ P++ ++V+LSN Y+
Sbjct: 603 KAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYA 662
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------V 257
++R+W V IR M + I+K PG IE G VH F +
Sbjct: 663 NARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLNM 722
Query: 258 KA---GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
KA G+VP+ S VL D+++ +KE L +H+E+LA+ +GL+ +RIIKNLR+C D
Sbjct: 723 KARNEGYVPDFSSVLLDVEDVDKEQRLWVHSERLALAYGLIRTPSISPLRIIKNLRICAD 782
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A +ISK+ R+ ++ D NRFHHF G CSC D+W
Sbjct: 783 CHAAIKLISKIVQRDIIIRDMNRFHHFHEGICSCGDYW 820
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 81/195 (41%), Gaps = 25/195 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------ 54
YVE+ EE+L LF ++ G + T S+L AC L VG +H K
Sbjct: 221 YVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEE 280
Query: 55 ------------KNIEVDVGLG----MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
K+ +VD L M DV+ + +I A Q +A+E F M+
Sbjct: 281 LFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRR 340
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERI-SHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V P+ T +L AC A LVD ++ + + K G+ ++ L+ + + GR+
Sbjct: 341 GLVLPNQFTLASLLQAC--ASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRM 398
Query: 158 AKAEELIKNMPMALD 172
+ +L P D
Sbjct: 399 ENSLQLFSESPNCTD 413
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 94/223 (42%), Gaps = 24/223 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEA+ +F ++ + ++ T+ SLL AC L L++G +H +++K ++++
Sbjct: 322 YAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMN 381
Query: 61 VGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL D+ ++ +IV G G KAL F +M
Sbjct: 382 VFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLE 441
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
V+ +T+ VL AC+ + E S + +S K + L+ + + G I
Sbjct: 442 CQVQGTEVTYSSVLRACAGIAAL-EPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIK 500
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE 201
A L+ +M D ++ +H A + + +LE
Sbjct: 501 DA-RLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLE 542
>gi|115470991|ref|NP_001059094.1| Os07g0191500 [Oryza sativa Japonica Group]
gi|34394559|dbj|BAC83863.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510108|dbj|BAD30876.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610630|dbj|BAF21008.1| Os07g0191500 [Oryza sativa Japonica Group]
Length = 550
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 160/403 (39%), Positives = 226/403 (56%), Gaps = 61/403 (15%)
Query: 10 ALLLFREVQHKG-LTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK------------- 55
AL LFRE+Q L D T+ S+L AC GAL +G++ H ++++
Sbjct: 149 ALDLFREMQRDTELAPDAYTVQSVLGACAGAGALSLGVYAHALLLRELGGDGDGEAVSRD 208
Query: 56 ----NIEVD-------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEM-Q 97
N VD V M +D+ + +I+ LA G+ +++E F M Q
Sbjct: 209 MLINNSLVDLYGKCGALELAQQVFDRMPARDLASWNVMILTLANHGRVCESVELFDRMTQ 268
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+ + P+AITFV VL AC+H GLV+E +F +M ++Y I+P IEHYGC+V +L RAG I
Sbjct: 269 VEKMAPNAITFVAVLSACNHGGLVEEGRRYFAMMVDQYRIKPRIEHYGCMVDLLARAGFI 328
Query: 158 AKAEELIKNMPMALDHFVLGGLLGAC-RIHDNLEAAERAAQQLLELLPDNG--GSYVILS 214
+A +++ M D + LL AC + + LE E A+ LE+ PD+ G YV+LS
Sbjct: 329 EEALDIVAGMNCRPDAIIWRSLLDACCKKNAGLELTEAMAKLALEV-PDDAVSGVYVLLS 387
Query: 215 NRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV----------------- 257
Y+S+++W V +R LM E +KK PG IE+DG+VH+FV
Sbjct: 388 RVYASAQRWNDVGMVRRLMVEEGVKKEPGFSSIEMDGLVHQFVAGDTSHPQSEAIYEKLD 447
Query: 258 -------KAGFVPNKSEV-LFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNL 309
AG+ P+ SE L + K AL LH+E+LAI+FGL++ PG IRI+KNL
Sbjct: 448 EIQLKLTSAGYKPDLSEAPLVASIDNAKGAALRLHSERLAISFGLLNATPGAPIRILKNL 507
Query: 310 RVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
RVC DCHT + +ISK+Y E +V DR RFHHFK+GSCSCKD+W
Sbjct: 508 RVCKDCHTISKLISKLYGVEIIVRDRIRFHHFKDGSCSCKDYW 550
>gi|218196348|gb|EEC78775.1| hypothetical protein OsI_19008 [Oryza sativa Indica Group]
Length = 580
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/376 (37%), Positives = 212/376 (56%), Gaps = 53/376 (14%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKD--------------- 69
++VT+V+ L AC +G L+ GM++H + + ++ +V + +L D
Sbjct: 210 NEVTIVAALSACAQIGLLKDGMYVHEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVF 269
Query: 70 ---------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+++ A I +M G G AL F EM R ++PD +T++ VL C+H+GL
Sbjct: 270 HSIKPEDRTLVSYNAAIQAHSMHGHGGDALRLFDEMPTR-IEPDGVTYLAVLCGCNHSGL 328
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLL 180
VD+ + FN M + P+++HYG +V +LGRAGR+ +A + + +MP D + LL
Sbjct: 329 VDDGLRVFNSMR----VAPNMKHYGTIVDLLGRAGRLTEAYDTVISMPFPADIVLWQTLL 384
Query: 181 GACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKK 240
GA ++H +E AE AA +L EL + G YV+LSN Y+S +W V R+R+ M +++K
Sbjct: 385 GAAKMHGVVELAELAANKLAELGSNVDGDYVLLSNVYASKARWMDVGRVRDTMRSNDVRK 444
Query: 241 PPGCILIEVDGVVHEFVKA------------------------GFVPNKSEVLFDMDEEE 276
PG E+DGV+H+F+ G+ P S VL D+ EEE
Sbjct: 445 VPGFSYTEIDGVMHKFINGDKEHPRWQEIYRALEDIVSRISELGYEPETSNVLHDIGEEE 504
Query: 277 KETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRN 336
K+ AL H+EKLAI FGL++ PG +R+IKNLR+C DCH +ISK Y R V+ DR
Sbjct: 505 KQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLISKAYGRVIVIRDRA 564
Query: 337 RFHHFKNGSCSCKDFW 352
RFH F++G CSC+D+W
Sbjct: 565 RFHRFEDGQCSCRDYW 580
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/400 (35%), Positives = 215/400 (53%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGA-LEVGMWLHPYIMKKNIEV 59
Y + E A+ +F E+ G+ ++ T S+L C A + G H + +K ++
Sbjct: 473 YAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDS 532
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ + AL KD+++ ++I A GQ KAL+ F EM+
Sbjct: 533 SLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMK 592
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
R VK D++TF+GV AC+HAGLV+E +F++M I P+ EH C+V + RAG++
Sbjct: 593 KRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQL 652
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA ++I NMP + +L ACR+H E AA++++ ++P++ +YV+LSN Y
Sbjct: 653 EKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMY 712
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
+ S W++ ++R+LM ERN+KK PG IEV + F+
Sbjct: 713 AESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLS 772
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+ P+ S VL D+D+E KE L H+E+LAI FGL++ G + IIKNLRVC
Sbjct: 773 TRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCG 832
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHF-KNGSCSCKDFW 352
DCH +I+K+ RE VV D NRFHHF +G CSC DFW
Sbjct: 833 DCHVVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 872
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 26/187 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
++++ EEA+ LF E++ KG+ ++ T +L A + EV H ++K N E
Sbjct: 376 FLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSEV----HAQVVKTNYERS 431
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL KD++ +A++ A G+ A++ F E+
Sbjct: 432 STVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTK 491
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
GVKP+ TF +L C+ + F+ + K + S+ L+ + + G I
Sbjct: 492 GGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIE 551
Query: 159 KAEELIK 165
AEE+ K
Sbjct: 552 SAEEVFK 558
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 69/186 (37%), Gaps = 23/186 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ D +EA LF +QH G+ D S+L L G LH +K D
Sbjct: 72 FSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDD 131
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G +L D V+T T LI A + L F MQ
Sbjct: 132 VSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQD 191
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G +P++ TF L + G V R + + K G+ +I L+ + + G +
Sbjct: 192 EGTQPNSFTFAAALGVLAEEG-VGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVR 250
Query: 159 KAEELI 164
KA L
Sbjct: 251 KARILF 256
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 56/139 (40%), Gaps = 22/139 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y +S EE L LF +Q +G + T + L G G+ +H ++K ++
Sbjct: 173 YARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 232
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + +L K V+T ++I A G +AL FY M++
Sbjct: 233 IPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL 292
Query: 99 RGVKPDAITFVGVLVACSH 117
V+ +F ++ C++
Sbjct: 293 NHVRLSESSFASIIKLCAN 311
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 216/399 (54%), Gaps = 48/399 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLH---------PY 51
Y +++ EEA+ F E+Q G+ D T+ S++ +C +L +LE G H Y
Sbjct: 354 YGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRY 413
Query: 52 IMKKNIEVDVGLG--------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
I N V + G M+ D ++ TAL+ A G+ + ++ F +M
Sbjct: 414 ITVSNALVTL-YGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKML 472
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+ G+KPD +TF+GVL ACS AGLV++ +F+ M + + I P +HY C++ + R+GR
Sbjct: 473 VNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRF 532
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+AEE IK MP + D F LL +CR+ N+E + AA+ LLE P N SYV+L + +
Sbjct: 533 KEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMH 592
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF--------------------- 256
++ +W +V +R M +R +KK PGC I+ VH F
Sbjct: 593 AAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLN 652
Query: 257 ---VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ G+ P+ S VL D+ + +K ++ H+EKLAI FGL+ + IRI+KNLRVC
Sbjct: 653 SKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCV 712
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH AT ISK+ R+ +V D RFH F +G+CSC DFW
Sbjct: 713 DCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 23/181 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EAL +FR ++ +G+ D+ T S+L AC L A E G +H YI + E +V +G AL
Sbjct: 261 EALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALV 320
Query: 69 D----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
D +++ TA+IV +A+ F EMQ+ G+KPD
Sbjct: 321 DMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDF 380
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
T V+ +C++ ++E + F+ ++ G+ I LV + G+ G I A L
Sbjct: 381 TLGSVISSCANLASLEEG-AQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDE 439
Query: 167 M 167
M
Sbjct: 440 M 440
>gi|15242278|ref|NP_197038.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180838|sp|Q9LXE8.1|PP386_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15340, mitochondrial; Flags: Precursor
gi|7671503|emb|CAB89344.1| putative protein [Arabidopsis thaliana]
gi|332004768|gb|AED92151.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 212/381 (55%), Gaps = 57/381 (14%)
Query: 27 VTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV-------DVGLGMALKD---------- 69
VT+ S+L AC G L VG W+H Y +KK + + DV +G AL D
Sbjct: 245 VTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDS 304
Query: 70 ------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSH 117
V+T AL LAM G+G ++ F +M IR VKPD +TF VL ACSH
Sbjct: 305 SMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSH 363
Query: 118 AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLG 177
+G+VDE F+ + YG+ P ++HY C+V +LGRAG I +AE L++ MP+ + VLG
Sbjct: 364 SGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLG 422
Query: 178 GLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERN 237
LLG+C +H +E AER ++L+++ P N +++SN Y + + +R + +R
Sbjct: 423 SLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRG 482
Query: 238 IKKPPGCILIEVDGVVHEFVK------------------------AGFVPNKSEVLF--D 271
I+K PG I V+ VH F AG+VP+ S ++ +
Sbjct: 483 IRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSE 542
Query: 272 MDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETV 331
D EEKE AL H+EKLA+ FGL+ P + + KNLR+C DCH+A I+SKVY+RE +
Sbjct: 543 GDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREII 602
Query: 332 VMDRNRFHHFKNGSCSCKDFW 352
+ DRNRFH FK GSCSC D+W
Sbjct: 603 IRDRNRFHQFKGGSCSCSDYW 623
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 211/385 (54%), Gaps = 33/385 (8%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ + EEAL +F ++ GL + T S + A ++ + +G +H I K + +
Sbjct: 615 FAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSE 674
Query: 61 VGLGMALK---------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGV 111
+ AL D ++ ++I + G G +AL+ F +M+ V P+ +TFVGV
Sbjct: 675 TEVSNALITLYAKCGTIDDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGV 734
Query: 112 LVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMAL 171
L ACSH GLVDE IS+F MSE + + P EHY C+V +LGR+G +++A+ ++ MP+
Sbjct: 735 LSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQP 794
Query: 172 DHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRE 231
D V LL AC +H N++ E AA LLEL P + +YV++SN Y+ S KW R R+
Sbjct: 795 DAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQ 854
Query: 232 LMAERNIKKPPGCILIEVDGVVHEF------------------------VKAGFVPNKSE 267
+M +R +KK PG +EVD VH F + G+VP +
Sbjct: 855 MMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRAAENGYVPRCNS 914
Query: 268 VLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYN 327
+L D + +K+ +H+E+LAI FGL+S + + KNLRVC DCH +SK+ +
Sbjct: 915 LLSDAEIRQKDPTEIIHSERLAIAFGLLSLTSSTPLYVFKNLRVCEDCHNWIKHVSKITD 974
Query: 328 RETVVMDRNRFHHFKNGSCSCKDFW 352
R +V D RFHHFK GSCSCKD+W
Sbjct: 975 RVIIVRDSYRFHHFKVGSCSCKDYW 999
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV-------G 62
AL LF+++ D VT+ SLL AC +GAL G H Y +K + D+
Sbjct: 336 ALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLD 395
Query: 63 LGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
L + D+ T + NK+ + F +MQI G+ P+ T+ +L C+ G D
Sbjct: 396 LYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATD 455
Query: 123 --ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
E+I H ++ K G + ++ L+ + + G++ A ++ + +
Sbjct: 456 LGEQI-HTQVL--KTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRL 499
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 25/175 (14%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV------- 61
++ +F ++Q +G+ ++ T S+L CT LGA ++G +H ++K + +V
Sbjct: 421 KSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLI 480
Query: 62 -------GLGMALK--------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
L ALK DV++ TA+I + +AL F EMQ +G+K D I
Sbjct: 481 DMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNI 540
Query: 107 TFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA 160
F + AC+ +D+ R H Y SI + LV + R G++ +A
Sbjct: 541 GFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGN--ALVSLYARCGKVREA 593
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 86/227 (37%), Gaps = 46/227 (20%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL LF+E+Q +G+ D + S + AC + AL+ G +H D
Sbjct: 514 YTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDD 573
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G AL KD ++ +L+ A G +AL F +M
Sbjct: 574 LSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNK 633
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERIS-HFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G++ ++ TF + A A + + RI + M K G E L+ + + G I
Sbjct: 634 AGLEINSFTFGSAVSAA--ANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTI 691
Query: 158 A---------------------KAEELIKNMPMALDHFVLGGLLGAC 183
K E +K + + +H G+L AC
Sbjct: 692 DDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSAC 738
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 37/179 (20%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEA+LLF ++ +L ACT + E G LH ++K+ + + AL
Sbjct: 247 EEAMLLFCQI--------------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNAL 292
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+D ++ +LI LA G N+AL F +M + KPD
Sbjct: 293 VTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDC 352
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+T +L AC+ G + F+ + K G+ I G L+ + + I A E
Sbjct: 353 VTVASLLSACASVGALPNG-KQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF 410
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/398 (36%), Positives = 220/398 (55%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +E+L L E+ KG+ + T+V+++ + + L G +H + + + +
Sbjct: 235 YAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYN 294
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL D V++ A+I AM G +AL+ F E +
Sbjct: 295 DKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLF-ERMM 353
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ +PD ITFVG L ACS L+DE + +NLM I P++EHY C+V +LG G++
Sbjct: 354 KEAQPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLD 413
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI+ M + D V G LL +C+ H N+E AE A ++L+EL PD+ G+YVIL+N Y+
Sbjct: 414 EAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYA 473
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S KW+ V R+R+LM ++ IKK C IEV V+ F+
Sbjct: 474 QSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEG 533
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+VP+ V D++E+EK + H+E+LAI FGL+S +PG + I KNLR+C D
Sbjct: 534 LMREAGYVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTRLLITKNLRICED 593
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH A ISK+ RE V D NR+HHF++G CSC D+W
Sbjct: 594 CHVAIKFISKITEREITVRDVNRYHHFRHGLCSCGDYW 631
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 214/391 (54%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+EAL F ++Q +G+ + ++ LL AC L L+ G +H ++ DV + AL
Sbjct: 743 KEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATAL 802
Query: 68 KDVMTLTA----------------------LIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D+ + ++ +I+ A+ G G +A+ F EMQ GV PDA
Sbjct: 803 IDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDA 862
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
ITF +L AC ++GL+ E +F+ M Y I P +EHY C+V +LGRAG + +A +LI
Sbjct: 863 ITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIH 922
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP+ D + G LLG+CRIH NL+ AE AA+ L +L P+N +Y+++ N YS +W+
Sbjct: 923 TMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWED 982
Query: 226 VKRIRELMAERNIK---------------------KP---PGCILIEVDGVVHEFVKAGF 261
+ +RELM ++ KP G I E+ +V E K G+
Sbjct: 983 MDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGY 1042
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ + V +MDE EK+ L HTEKLAIT+GL+ G IR+IKN R+C+DCH+A
Sbjct: 1043 VPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKY 1102
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS V RE + D RFHHF+ G CSC DFW
Sbjct: 1103 ISLVKARELFLRDGVRFHHFREGKCSCNDFW 1133
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 82/185 (44%), Gaps = 24/185 (12%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLAC-THLGALEVGMWLHPYIMKKNIEVD 60
++ ++ + LFR++Q L + T+V +L A + LG L +G H Y+++ + D
Sbjct: 600 LQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCD 659
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G +L +++ +L+ + G AL +M+
Sbjct: 660 VYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEK 719
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KPD +T+ G++ + G E ++ F M ++ G+ P+ CL+ +
Sbjct: 720 EGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQE-GVMPNSASITCLLRACASLSLLQ 778
Query: 159 KAEEL 163
K +E+
Sbjct: 779 KGKEI 783
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 221/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ EEA L+F+++Q + D TMVSL+ AC+HL AL+ G H ++ + + +
Sbjct: 416 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASE 475
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL +D+++ +I + G G +A F EM
Sbjct: 476 TSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNN 535
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G PD +TF+ +L ACSH+GLV E F++M YG+ P +EHY C+V +L R G +
Sbjct: 536 LGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLD 595
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A E I++MP+ D V LLGACR++ N++ ++ ++ + EL P+ G++V+LSN YS
Sbjct: 596 EAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYS 655
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ ++ + +R + + KK PGC IE++G +H FV
Sbjct: 656 AAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILV 715
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+ P+ S VL D++EEEKE AL H+EKLAI +G++S I + KNLRVC D
Sbjct: 716 GIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGD 775
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHT IS + R +V D NRFHHFKNG CSC DFW
Sbjct: 776 CHTVIKHISLLKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 26/192 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTG-DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
+V S +A LLF+ + +GL ++ S L AC L L +G LH + K +
Sbjct: 314 FVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHA 373
Query: 60 DVGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
D+ G MA+KD ++ +AL+ G+ +A F +MQ
Sbjct: 374 DLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQ 433
Query: 98 IRGVKPDAITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
V+PDA T V ++ ACSH A L R SH +++ SI L+ + + GR
Sbjct: 434 ACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSI--CNALIDMYAKCGR 491
Query: 157 IAKAEELIKNMP 168
I + ++ MP
Sbjct: 492 IDLSRQVFNMMP 503
>gi|359497573|ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 287
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 123/287 (42%), Positives = 183/287 (63%), Gaps = 24/287 (8%)
Query: 90 LEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVY 149
L++F + G +PD ITFVGVL AC+HAGLVD+ + +F+ + EK+G+ + +HY CL+
Sbjct: 1 LQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLID 60
Query: 150 ILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGS 209
+L R+GR+ +AE++I MP+ D F+ LLG CRIH NL+ A+RAA+ L E+ P+N +
Sbjct: 61 LLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIEPENPAT 120
Query: 210 YVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------ 257
Y L+N Y+++ W V +R++M R + K PG IE+ VH F+
Sbjct: 121 YTTLANIYATAGLWGGVAEVRKVMDARGVVKKPGLSWIEIKREVHVFLVGDTSHAKSKEI 180
Query: 258 ------------KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRI 305
+ G+VP+ + VL D++EE+KE L+ H+EKLA+ FG++S G LI++
Sbjct: 181 HEFLGKLSKRMKEEGYVPDTNFVLHDVEEEQKEQNLSYHSEKLAVAFGIISTPAGTLIKV 240
Query: 306 IKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
KNLR C DCHTA ISK+ R+ +V D NRFH F++GSCSC+D+W
Sbjct: 241 FKNLRTCVDCHTAIKFISKIAKRKIIVRDSNRFHCFEDGSCSCRDYW 287
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 212/398 (53%), Gaps = 48/398 (12%)
Query: 3 EDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN-IEVDV 61
+D A F+E++ +G+ +VT VS L AC + LE G +H +E +
Sbjct: 544 KDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSL 603
Query: 62 GLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
LG M K +++ +LIV A G +AL EM ++
Sbjct: 604 VLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQ 663
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G PD+ T V +L SHAGL++ + HF + +G+ PS CLV +L R G +
Sbjct: 664 GFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDA 723
Query: 160 AEELIKNMPMA-LDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
AEELI P D LL AC+ + + + R A+++ EL P + GS+V+L+N Y+
Sbjct: 724 AEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYA 783
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
S +W RIR++M ++KK PGC IE+ G VHEF+
Sbjct: 784 SVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEDLEKLTL 843
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+AG+VP+ + V+ D++E +KE L+ H+E+LAI FGL+S PG IR++KNLRVC+D
Sbjct: 844 RMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCSD 903
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH AT IIS V RE VV D +RFHHFK+G CSC DFW
Sbjct: 904 CHAATKIISSVVGREIVVRDSSRFHHFKHGQCSCGDFW 941
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 25/190 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI----MKKN 56
Y ++ EAL LF +Q +G DKV V L AC G L+ G +H + + N
Sbjct: 33 YSQNGHYREALELFTRMQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVGSGLTSN 92
Query: 57 IEVDVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
I + L GM L+DV++ TA++ V A G ++ALE M
Sbjct: 93 IIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDA 152
Query: 99 RGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GVKP+ +TFV ++ C+ L+D R H +++E G+ P LV++ G G
Sbjct: 153 EGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINE--GLEPDGILGNALVHMYGSCGSF 210
Query: 158 AKAEELIKNM 167
+ + M
Sbjct: 211 DDMKSVFSRM 220
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 89/214 (41%), Gaps = 37/214 (17%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EE LL+FR++ +G+ ++VT +S++ C +L A++ G + I++ L +L
Sbjct: 242 EEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSL 301
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+DV+ A++ A G +A+ M + G +
Sbjct: 302 ISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANK 361
Query: 106 ITFVGVLVAC------SHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
+T++ VL AC S + R+ L+ + + S+ + + G+ G+
Sbjct: 362 VTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSV------ITMYGKCGQTEA 415
Query: 160 AEELIKNMPMALD---HFVLGGLLGACRIHDNLE 190
A + + MP D + V+ +G + D LE
Sbjct: 416 AMSVFEAMPRKDDVSWNAVINASVGNSKFQDALE 449
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 64 GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE 123
G++ K+V + T ++ + G +ALE F MQ G +PD + FV L AC+ +G +D
Sbjct: 17 GISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVFVIALDACAASGELDH 76
Query: 124 -RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
R H +++ G+ +I LV + G+ + AE++ M
Sbjct: 77 GRQIHSSVVGS--GLTSNIIISNSLVNMYGKCQDVPCAEKVFDGM 119
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 37/220 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +AL + +G+ ++VT V+++ C L L++G +H I+ + +E D
Sbjct: 134 YAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPD 193
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
LG AL V+ T +I + GQ + L F +M +
Sbjct: 194 GILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDL 253
Query: 99 RGVKPDAITFVGVLVACSH------AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILG 152
GVK + +T++ ++ C + ++D RI S S L+ + G
Sbjct: 254 EGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCS-------STLLATSLISLYG 306
Query: 153 RAGRIAKAEELIKNMPMALDHFVLGGLLGACRIH-DNLEA 191
+ G + +A+ L+++M D ++ AC + DN EA
Sbjct: 307 QCGILDRAKGLLEHM-YQRDVVAWNAMVTACAQNGDNWEA 345
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 25/141 (17%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI---EVDVG--- 62
EA+ L R + +G +KVT +S+L AC +L AL G +H ++ + EV VG
Sbjct: 344 EAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSV 403
Query: 63 -----------------LGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
M KD ++ A+I + ALE F+ M++ G++ +
Sbjct: 404 ITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNE 463
Query: 106 ITFVGVLVACSHAGLVDERIS 126
T + +L AC GL D +++
Sbjct: 464 FTLLSLLEAC--GGLEDLKLA 482
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/396 (36%), Positives = 218/396 (55%), Gaps = 47/396 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ EAL LF ++Q K D +TM +L AC L AL+ G +H +I+++ D
Sbjct: 473 YSQNLLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSD 531
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL KD+++ T +I M G GN+A+ F EM+I
Sbjct: 532 LHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRI 591
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD +F +L ACSH+GL++E FN M + G+ P +EHY C+V +L R G ++
Sbjct: 592 AGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLS 651
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
KA + I++MP+ D + G LL CRIH +++ AE+ A+ + EL PDN YV+L+N Y+
Sbjct: 652 KAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYA 711
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSE----------- 267
+ KW++VK++R+ M +R K+ PGC IEV G + FV +++
Sbjct: 712 EAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTM 771
Query: 268 -------------VLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
VL + D+ EKE H+EK A+ FG+++ PG +R+ KN RVC D
Sbjct: 772 QMQNEDYSSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNRRVCGD 831
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKD 350
CH +SK E V+ D NRFHHFK+G CSC+D
Sbjct: 832 CHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSCRD 867
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 28/192 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV + +A+ LF E+Q KG+ D T+ S++ AC +L+ G +H Y++K + +
Sbjct: 372 YVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSN 431
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + AL KD+++ +I + N+ALE F +MQ
Sbjct: 432 LPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQ- 490
Query: 99 RGVKPDAITFVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGC-LVYILGRAGR 156
+ KPD IT VL AC+ +D+ R H +++ Y S H C LV + + G
Sbjct: 491 KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGY---FSDLHVACALVDMYAKCGL 547
Query: 157 IAKAEELIKNMP 168
+ A+ L +P
Sbjct: 548 LVLAQLLFDMIP 559
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 25/183 (13%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK-------------- 55
L +F ++ G+ D T+VS+L+AC ++G L +G LH + +K
Sbjct: 280 GLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLD 339
Query: 56 --------NIEVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
N +V + M +++ T++I G + A+ F EMQ +GV+PD T
Sbjct: 340 MYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYT 399
Query: 108 FVGVLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
++ AC+ + +D+ R H ++ K G+ ++ L+ + + G + +A +
Sbjct: 400 VTSIVHACACSSSLDKGRDVHSYVI--KNGMGSNLPVTNALINMYAKCGSVEEARLVFSK 457
Query: 167 MPM 169
+P+
Sbjct: 458 IPV 460
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 22/133 (16%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
E++ LF+++Q G+ G+ T +L LG ++ +H Y++K + + +L
Sbjct: 178 ESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLI 237
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
DV++ ++I + G LE F +M I GV+ D
Sbjct: 238 AAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLT 297
Query: 107 TFVGVLVACSHAG 119
T V VLVAC++ G
Sbjct: 298 TLVSVLVACANIG 310
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/400 (35%), Positives = 214/400 (53%), Gaps = 48/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGA-LEVGMWLHPYIMKKNIEV 59
Y + E A+ +F E+ G+ ++ T S+L C A + G H + +K ++
Sbjct: 469 YAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDS 528
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ + AL KD+++ ++I A GQ KAL+ F EM+
Sbjct: 529 SLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMK 588
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
R VK D +TF+GV AC+HAGLV+E +F++M I P+ EH C+V + RAG++
Sbjct: 589 KRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQL 648
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA ++I+NMP + +L ACR+H E AA++++ + P++ +YV+LSN Y
Sbjct: 649 EKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMY 708
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
+ S W++ ++R+LM ERN+KK PG IEV + F+
Sbjct: 709 AESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLS 768
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+ P+ S VL D+D+E KE L H+E+LAI FGL++ G + IIKNLRVC
Sbjct: 769 TRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCG 828
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHF-KNGSCSCKDFW 352
DCH +I+K+ RE VV D NRFHHF +G CSC DFW
Sbjct: 829 DCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 26/187 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
++++ EEA+ LF E++ KG+ ++ T +L A + EV H ++K N E
Sbjct: 372 FLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEV----HAQVVKTNYERS 427
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL KD++ +A++ A G+ A++ F E+
Sbjct: 428 STVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTK 487
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+KP+ TF +L C+ + F+ + K + S+ L+ + + G I
Sbjct: 488 GGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIE 547
Query: 159 KAEELIK 165
AEE+ K
Sbjct: 548 SAEEVFK 554
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 22/139 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y +S +E L LF +Q++G + T + L G G+ +H ++K ++
Sbjct: 169 YARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 228
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + +L K V+T ++I A G +AL FY M++
Sbjct: 229 IPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL 288
Query: 99 RGVKPDAITFVGVLVACSH 117
V+ +F V+ C++
Sbjct: 289 NYVRLSESSFASVIKLCAN 307
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 213/398 (53%), Gaps = 47/398 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
E+ EE L LF ++ +G + +C LGA G H ++K + +
Sbjct: 393 AENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSL 452
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
G AL D ++ ALI L G G +A++ + EM +
Sbjct: 453 SAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKK 512
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G++PD ITF+ VL ACSHAGLVD+ +FN M Y I P +HY L+ +L R+G+ ++
Sbjct: 513 GIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSE 572
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
AE +I+++P + LL CR+H N+E AA +L L+P++ G+Y++LSN Y++
Sbjct: 573 AESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAA 632
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
+ +W++V R+R+LM +R +KK C IE++ VH F+
Sbjct: 633 TGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKE 692
Query: 258 --KAGFVPNKSEVLFDMDEE-EKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
+ G+VP+ S VL D++ + KE L H+EK+A+ FGL+ PG IRI KNLR C D
Sbjct: 693 MRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGD 752
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH +SKV R+ ++ DR RFHHF+NG CSC +FW
Sbjct: 753 CHNFFRFLSKVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 99/259 (38%), Gaps = 56/259 (21%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK---NI 57
YV +EAL + R + G+ D+ T S++ AC + L++G +H Y++++ +
Sbjct: 261 YVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSF 320
Query: 58 EVDVGL------------------GMALKDVMTLTAL----------------------- 76
D L M KD+++ AL
Sbjct: 321 HFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK 380
Query: 77 --------IVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHF 128
I LA G G + L+ F M+ G +P F G + +C+ G F
Sbjct: 381 NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG-QQF 439
Query: 129 NLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDN 188
+ K G S+ L+ + + G + +A+++ + MP LD L+ A H +
Sbjct: 440 HAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMP-CLDSVSWNALIAALGQHGH 498
Query: 189 LEAAERAAQQLLE--LLPD 205
A +++L+ + PD
Sbjct: 499 GVEAVDVYEEMLKKGIRPD 517
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 138/390 (35%), Positives = 212/390 (54%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN------------ 56
E LF + G+ ++ T +L AC + ++G +H + K
Sbjct: 246 EGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALV 305
Query: 57 ----------IEVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
V V GM D+++ TA+I A GQ ++AL YF + G +PD +
Sbjct: 306 HMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHV 365
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFVGVL AC+HAGLVD+ +S F+ + ++YGI + +HY C++ +L R+G +AEE+I
Sbjct: 366 TFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAEEMINT 425
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
M + + F+ LLG CRIH N+ A AA+ L E+ P+N +YV L+N Y+S + +V
Sbjct: 426 MSVKPNKFLWASLLGGCRIHKNVRLARWAAEALFEIEPENPATYVTLANIYASVGLFDEV 485
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGFV 262
+ R +M + I K P IEV +H F+ + G+V
Sbjct: 486 ENTRRIMELKGITKMPASSWIEVGTRMHVFLVGDKLHPQAEQVYALLKKLYVKMREEGYV 545
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
+ VL D+++E+K+ + H+E+LA+ FG+++ G I++ KNLR+C DCHT +I
Sbjct: 546 ADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGAPIKVFKNLRICGDCHTTIKLI 605
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SK+ RE +V D NRFHHFKNGSCSC+D+W
Sbjct: 606 SKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
M ++DV++ TA++ + + F M G++P+ T+ GVL AC A E+
Sbjct: 223 MPVRDVVSWTAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRAC--AEFTSEK 280
Query: 125 IS---HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
+ H + + G E LV++ + G + A + + MP
Sbjct: 281 LGKQVHGRMTKSRAGDSCFAE--SALVHMYSKYGDMGTAVRVFRGMP 325
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/376 (38%), Positives = 210/376 (55%), Gaps = 44/376 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E+AL LF + + +VT S L AC L ALE G+ +H +K +
Sbjct: 425 EKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFD--------- 475
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVL-------VACSHAGL 120
KD++ ALI + A CG A F M K D +++ ++ +AC++AGL
Sbjct: 476 KDIVVTNALIDMYAKCGSIKDARLVFDLMN----KQDEVSWNAMISGYSMHGLACANAGL 531
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLL 180
+D+ ++F M + +GI P IEHY C+V++LGR G + KA +LI +P V LL
Sbjct: 532 LDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALL 591
Query: 181 GACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKK 240
GAC IH+++E +AQ +LE+ P + ++V+LSN Y+++++W V +R+ M + +KK
Sbjct: 592 GACVIHNDIELGRISAQHVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKK 651
Query: 241 PPGCILIEVDGVVHEFV------------------------KAGFVPNKSEVLFDMDEEE 276
PG IE G VH F KAG++PN + VL D+++EE
Sbjct: 652 EPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEE 711
Query: 277 KETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRN 336
KE L +H+E+LA++FG++ G IRI+KNLR+C DCH A ISKV RE VV D N
Sbjct: 712 KERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDIN 771
Query: 337 RFHHFKNGSCSCKDFW 352
RFHHF+ G CSC D+W
Sbjct: 772 RFHHFQEGLCSCGDYW 787
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 25/191 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ E+ +EAL LF +++ G + T S+ AC L A +VG +H +K E+D
Sbjct: 215 FAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELD 274
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G+AL KDV+ + +I A Q +A+E F++M+
Sbjct: 275 LYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQ 334
Query: 99 RGVKPDAITFVGVLVAC-SHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V P+ TF VL AC + GL H +++ K G+ + L+ + + GR+
Sbjct: 335 ALVLPNQFTFASVLQACATMEGLNLGNQIHCHVI--KIGLHSDVFVSNALMDVYAKCGRM 392
Query: 158 AKAEELIKNMP 168
+ L P
Sbjct: 393 ENSMXLFAESP 403
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 23/139 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EA+ +F +++ + ++ T S+L AC + L +G +H +++K + D
Sbjct: 316 YAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSD 375
Query: 61 VGLGMALKDV----------MTLTA-------------LIVVLAMCGQGNKALEYFYEMQ 97
V + AL DV M L A +IV G G KAL F M
Sbjct: 376 VFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNML 435
Query: 98 IRGVKPDAITFVGVLVACS 116
V+ +T+ L AC+
Sbjct: 436 EYRVQATEVTYSSALRACA 454
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 22/137 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E EA+ LF + +G + ++L + E+G +H I K E +
Sbjct: 114 YAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESN 173
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+G AL KD+++ T ++ A +AL+ F +M++
Sbjct: 174 AFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRM 233
Query: 99 RGVKPDAITFVGVLVAC 115
G KP+ TF V AC
Sbjct: 234 VGFKPNNFTFASVFKAC 250
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 209/387 (54%), Gaps = 47/387 (12%)
Query: 5 SACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG 64
S E+AL LF+ + G + SL AC+ G LE G W+H Y++K ++ G
Sbjct: 241 SGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG 300
Query: 65 ----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVK 102
+A +DV++ +L+ A G G +A+ +F EM+ G++
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIR 360
Query: 103 PDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE 162
P+ I+F+ VL ACSH+GL+DE ++ LM +K GI P HY +V +LGRAG + +A
Sbjct: 361 PNEISFLSVLTACSHSGLLDEGWHYYELM-KKDGIVPEAWHYVTVVDLLGRAGDLNRALR 419
Query: 163 LIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRK 222
I+ MP+ + LL ACR+H N E AA+ + EL PD+ G +VIL N Y+S +
Sbjct: 420 FIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGR 479
Query: 223 WKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------K 258
W R+R+ M E +KK P C +E++ +H FV +
Sbjct: 480 WNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKE 539
Query: 259 AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTA 318
G+VP+ S V+ +D++E+E L H+EK+A+ F L++ PG I I KN+RVC DCHTA
Sbjct: 540 LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTA 599
Query: 319 TNIISKVYNRETVVMDRNRFHHFKNGS 345
+ SKV RE +V D NRFHHFK+ S
Sbjct: 600 IKLASKVVGREIIVRDTNRFHHFKDAS 626
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EA+ F E++ G+ ++++ +S+L AC+H G L+ G W + +MKK+
Sbjct: 338 YAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG-WHYYELMKKD---- 392
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVAC 115
G+ + + ++ +L G N+AL + EM I +P A + +L AC
Sbjct: 393 -GI---VPEAWHYVTVVDLLGRAGDLNRALRFIEEMPI---EPTAAIWKALLNAC 440
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 23/142 (16%)
Query: 4 DSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL 63
D C+ ALL F ++ G + ++ T+ S++ A G LH + +K + +V +
Sbjct: 140 DRPCD-ALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 198
Query: 64 GMALKDVMT----------------------LTALIVVLAMCGQGNKALEYFYEMQIRGV 101
G AL D+ T ALI A KALE F M G
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258
Query: 102 KPDAITFVGVLVACSHAGLVDE 123
+P ++ + ACS G +++
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQ 280
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 152/399 (38%), Positives = 225/399 (56%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y ++ +EA+ LF ++ G+ D T VS+L AC HLGA +G W+H YI+ ++++
Sbjct: 187 YEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHEYIVGNGLDLN 246
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG +L ++V+ TA+I G G++A+E F+EM+
Sbjct: 247 VVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRR 306
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ P++ITFV VL AC+HAGLV+E F + E+Y + P +EH CLV +LGRAG +
Sbjct: 307 NGLFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLVPGVEHNVCLVDMLGRAGLLD 366
Query: 159 KAEELIKN-MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A IK +P +L +LGAC++H N + + A+ LL P+N YVILSN Y
Sbjct: 367 EAYNFIKEEIPENPAPAILTAMLGACKMHKNFDLGAQVAEHLLAAEPENPAHYVILSNIY 426
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ + + +V+ +R M + +KK G +EVD + F
Sbjct: 427 ALAGRMDQVEIVRNNMIRKCLKKQVGYSTVEVDQKTYLFSMGDKSHSETNAIYHYLDELM 486
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+AG+VP V+ +++EEE+E AL H+EKLAI FGL+ G IRI+KNLR+C
Sbjct: 487 WKCSEAGYVPVSDSVMHELEEEEREYALRYHSEKLAIAFGLLKTSHGTPIRIVKNLRMCE 546
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+A IS + +RE +V D+ RFHHFK GSCSC D+W
Sbjct: 547 DCHSAIKFISAISSREIIVRDKLRFHHFKVGSCSCLDYW 585
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 22/132 (16%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-- 67
+L + + ++ T S++ +C L AL+ G +H +++ +DV + AL
Sbjct: 95 SLYFYSRMVLSNVSPSNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVA 154
Query: 68 --------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
+ ++ ++I G +A+ F M+ GV+PD+ T
Sbjct: 155 LYGKCGDLINARKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSAT 214
Query: 108 FVGVLVACSHAG 119
FV VL AC+H G
Sbjct: 215 FVSVLSACAHLG 226
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 147/401 (36%), Positives = 215/401 (53%), Gaps = 52/401 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+++ EE L L + +G ++ T LL A + AL G LH + K I+
Sbjct: 303 YLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNR 362
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G AL +D++T A+I + G G +AL F +M
Sbjct: 363 VIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLS 422
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G P+ +TFVGVL AC+H LV+E + N + + + + P +EHY C+V +L RAG +
Sbjct: 423 AGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLE 482
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE ++ + D LL AC IH N + A+ +L++ P + G+Y +LSN Y+
Sbjct: 483 EAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYA 542
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+R W V IR++M ERN+KK PG IE+ VH F
Sbjct: 543 KARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNKVQLLLE 602
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLV---SPMPGVLIRIIKNLRV 311
+ G+VPN VL D+++E+KE+ LN H+EKLAI +GL+ SP P IR+IKNLR+
Sbjct: 603 MIKQLGYVPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKIPSPAP---IRVIKNLRI 659
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCHTA +ISKV NR +V D +RFHHF++G+C+C D W
Sbjct: 660 CEDCHTAVKLISKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 137/391 (35%), Positives = 216/391 (55%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK--NIEVDVGLG- 64
++AL++F ++ G + T +S + A +L ++ G +H +K E +V
Sbjct: 530 KQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANAL 589
Query: 65 -------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
M+L++ ++ +I + G+G +AL+ F +M+ G+KP+
Sbjct: 590 ISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPND 649
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TF+GVL ACSH GLV+E +S+F MS YG+ P +HY C+V ILGRAG++ +A +
Sbjct: 650 VTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVD 709
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP+ + + LL AC++H N+E E AA+ LLEL P + SYV+LSN Y+ + KW
Sbjct: 710 EMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWAN 769
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
++R++M +R I+K PG IEV VH F K G+
Sbjct: 770 RDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGY 829
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
+ + ++E+K+ +H+EKLA+ FGL++ P + +R+IKNLRVC+DCH+
Sbjct: 830 KQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKC 889
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S+V RE V+ D RFHHF +GSCSC D+W
Sbjct: 890 TSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 26/225 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E AL +F E+Q GL D VT+ SLL AC +G L+ G LH Y++K + D +L
Sbjct: 227 ECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSL 286
Query: 68 KD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D V+ ++V K+ E F +MQ G+ P+
Sbjct: 287 LDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQ 346
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
T+ +L C+ G + E + +S K G + G L+ + + G + KA ++++
Sbjct: 347 FTYPCILRTCTCTGQI-ELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILE 405
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE--LLPDNGG 208
M D ++ HD E A +++ + + PDN G
Sbjct: 406 -MLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIG 449
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 116/299 (38%), Gaps = 66/299 (22%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN---- 56
Y + +EA L+ ++ + + S+L ACT G +H + K+
Sbjct: 119 YAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSE 178
Query: 57 -------IEVDVGLG-----------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
I + +G G M D +T LI A CG G AL+ F EMQ+
Sbjct: 179 TFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQL 238
Query: 99 RGVKPDAITFVGVLVACS-----------HAGLVDERISHFNLMSE-------------- 133
G++PD +T +L AC+ H+ L+ +S F+ ++E
Sbjct: 239 SGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMS-FDYITEGSLLDLYVKCGDIE 297
Query: 134 ------KYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDH---FVLGGLLGACR 184
G R ++ + ++ G+ +AK+ E+ M H F +L C
Sbjct: 298 TAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCT 357
Query: 185 IHDNLEAAERAAQQLLELLPDNG---GSYV--ILSNRYSSSRKWKKVKRIRELMAERNI 238
+E E Q+ L NG YV +L + YS K ++I E++ +R++
Sbjct: 358 CTGQIELGE----QIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDV 412
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 92/235 (39%), Gaps = 27/235 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ CEEAL F+E+Q G+ D + + S AC + A+ G+ +H + D
Sbjct: 422 YVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAAD 481
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + L KD +T LI +AL F +M
Sbjct: 482 ISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQ 541
Query: 99 RGVKPDAITFVGVLVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G K + TF+ + A A L D ++ + + K G E L+ + G+ G I
Sbjct: 542 AGAKYNVFTFISAISAL--ANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSI 599
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHD-NLEAAERAAQQLLELLPDNGGSYV 211
A+ + M + + ++ +C H LEA + Q E L N +++
Sbjct: 600 EDAKMIFSEMSLR-NEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFI 653
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 26/203 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + S ++ +F ++Q G+ ++ T +L CT G +E+G +H +K E D
Sbjct: 321 YGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESD 380
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ + L +DV++ T++I +AL F EMQ
Sbjct: 381 MYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQD 440
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERIS-HFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV PD I AC+ + + + H + Y SI + LV + R GR
Sbjct: 441 CGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISI--WNTLVNLYARCGRS 498
Query: 158 AKAEELIKNMPMALDHFVLGGLL 180
+A L + + D GL+
Sbjct: 499 EEAFSLFREIEHK-DEITWNGLI 520
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 138/390 (35%), Positives = 211/390 (54%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI----------- 57
E LF + G+ ++ T +L AC + ++G +H + K
Sbjct: 246 EGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALV 305
Query: 58 -----------EVDVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+ V GM D+++ TA+I A GQ ++AL F + G +PD +
Sbjct: 306 HMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHV 365
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFVGVL AC+HAGLVD+ + F+ + +KYGI + +HY C++ +L R+G +AE++I
Sbjct: 366 TFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERAEDMINT 425
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP+ + F+ LLG CRIH N+ A AA+ L E+ P+N +YV L+N Y+S + +V
Sbjct: 426 MPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEPENPATYVTLANIYASVGLFDEV 485
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGFV 262
+ +R M R I K P IEV VH F+ + G+V
Sbjct: 486 ENMRRTMELRGITKMPASSWIEVGTRVHVFLVGDKSHPQAEEIYALLKKLYVKMREEGYV 545
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
+ VL D+++E+K+ + H+E+LA+ FG+++ G I++ KNLR+C DCHT +I
Sbjct: 546 ADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGSPIKVFKNLRICGDCHTTIKLI 605
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SK+ RE +V D NRFHHFKNGSCSC+D+W
Sbjct: 606 SKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
M ++DV++ TA++ G+ + F M G+ P+ T+ GVL AC A E+
Sbjct: 223 MPVRDVVSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRAC--AEFTSEK 280
Query: 125 IS---HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMP 168
+ H + + G S LV++ + G + A + + MP
Sbjct: 281 LGKQVHGRMAKSRTG--DSCFAGSALVHMYSKYGDMGTAMRVFRGMP 325
>gi|449521367|ref|XP_004167701.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like, partial [Cucumis sativus]
Length = 390
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 218/390 (55%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
EAL LF +++ + ++ TM L + L AL +G LH K ++ +V +G AL
Sbjct: 1 EALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALI 60
Query: 69 ----------------------DVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+++T A+I + G G +AL F +M G +P+ +
Sbjct: 61 IMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYV 120
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF+GV++AC+H LVDE +FN + +++ I P +EHY C+V +L R+GR+ +AE +++
Sbjct: 121 TFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRS 180
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
+ D LL AC +H + + ++ A+ LL+L P + G+Y++LSN ++ R+W V
Sbjct: 181 HQINWDVVSWRTLLNACYVHKHYDKGKKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHV 240
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GFV 262
IR+LM ERN+KK PG +E+ V H F G+V
Sbjct: 241 VEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLSKIRPLGYV 300
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ VL D+++E+K L+ H+EKLA+ +GL+ G IR+IKNLR+C+DCHTA +I
Sbjct: 301 PDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPIRVIKNLRMCDDCHTAIKLI 360
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SKV NR VV D NRFHHF+NG CSC D+W
Sbjct: 361 SKVANRVIVVRDANRFHHFQNGYCSCGDYW 390
>gi|297733830|emb|CBI15077.3| unnamed protein product [Vitis vinifera]
Length = 804
Score = 260 bits (665), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 201/356 (56%), Gaps = 41/356 (11%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKDVMTLTALIVVLAMCG 84
++ +V +L AC HLGAL+ G W+H YI K I + TALI + A CG
Sbjct: 462 NEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNIS---------TALIDMYAKCG 512
Query: 85 QGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNL---MSEKYGIRPSI 141
+ + A F + K D ++F ++ S+ GL + + ++ M +GI P I
Sbjct: 513 RIDCASRVFNGI----CKRDVLSFTSMISGLSYHGLGKDALRGSSILANMESLWGIAPKI 568
Query: 142 EHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE 201
EHYGC + +LGRAG + +A E++K MPM D + LL A RIH N+ E+ + +
Sbjct: 569 EHYGCYIDLLGRAGYLERALEVVKTMPMEPDIVIWRALLSASRIHHNVNLGEQIISHIGQ 628
Query: 202 L-LPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA- 259
L D+ G V+LSN Y+S +W++V +R+LM +R + PGC IEV+G+VHEF A
Sbjct: 629 LKSSDHNGGEVLLSNLYASLGRWERVTEMRKLMVDRRSESSPGCSWIEVNGLVHEFRVAD 688
Query: 260 -----------------------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVS 296
G+ N +V FD++EEEKE A+ H+EKLAI FGL+S
Sbjct: 689 QLHPQIVEIRNKLNEILKRLSQIGYSANTMQVSFDLNEEEKEQAVAWHSEKLAIAFGLMS 748
Query: 297 PMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
PG LIRI+KNLR C DCH+A IS+VY RE VV DR+RFH F G CSCKDFW
Sbjct: 749 TEPGTLIRIVKNLRTCEDCHSALKTISQVYGREIVVRDRSRFHTFIEGDCSCKDFW 804
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 98/208 (47%), Gaps = 26/208 (12%)
Query: 9 EALLLFREVQ-HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EAL F ++ H + ++ +VS+L AC HLGAL+ G W+H YI K I + + AL
Sbjct: 242 EALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTAL 301
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+D++T T++I L+M G G + L F EM G KPD
Sbjct: 302 IDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDD 361
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
IT +GVL CSH+GLV+E I H M K G ++ ++ + R+ A ++
Sbjct: 362 ITLLGVLNGCSHSGLVEEEIVHG--MVVKSGFESNLYVGNSVINMCSVFARMEDARKVFN 419
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAE 193
M D F LLG H ++ A
Sbjct: 420 QMS-ERDVFSWTSLLGGYAKHGEMDRAS 446
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 26/183 (14%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG---- 64
E L F E+ +G D +T++ +L C+H G +E + +H ++K E ++ +G
Sbjct: 344 ECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEEI-VHGMVVKSGFESNLYVGNSVI 402
Query: 65 ------------------MALKDVMTLTALIVVLAMCGQGNKA-LEYFYEMQIRG-VKPD 104
M+ +DV + T+L+ A G+ ++A L +F M V P+
Sbjct: 403 NMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHGEMDRASLTFFCNMLCDDRVNPN 462
Query: 105 AITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
V VL AC+H G +D+ + +L +K GIR S L+ + + GRI A +
Sbjct: 463 EAVLVCVLSACAHLGALDQG-NWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVF 521
Query: 165 KNM 167
+
Sbjct: 522 NGI 524
>gi|356509555|ref|XP_003523513.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 542
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 150/392 (38%), Positives = 216/392 (55%), Gaps = 48/392 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV--DVGLGMA 66
EA+ LF + G+ ++ T++S+L A GAL +G +H + + IE+ + A
Sbjct: 151 EAISLFERMLQCGVEVNEATVISVLRARADSGALSMGRKVHANLEEWGIEIHSKSNVSTA 210
Query: 67 LKDVMT--------------------LTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
L D+ TA+I LA G A++ F +M+ GVKPD
Sbjct: 211 LVDMYAKSGCIVRKVFDDVVDRDVFVWTAMISGLASHGLCKDAIDMFVDMESSGVKPDER 270
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
T VL AC +AGL+ E F+ + +YG++PSI+H+GCLV +L RAGR+ +AE+ +
Sbjct: 271 TVTTVLTACRNAGLIREGFMLFSDVQRRYGMKPSIQHFGCLVDLLARAGRLKEAEDFVNA 330
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQL--LELLPDNGGSYVILSNRYSSSRKWK 224
MP+ D + L+ AC++H + + AER + L ++ D+ GSY++ SN Y+S+ KW
Sbjct: 331 MPIEPDAVLWRTLIWACKVHGDDDRAERLMKHLEIQDMRADDSGSYILTSNVYASTGKWC 390
Query: 225 KVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAG 260
+RELM ++ + KP G IE+DG VHEFV K G
Sbjct: 391 NKAEVRELMNKKGLVKPLGSSRIEIDGGVHEFVMGDYNHPEAEEIFVELAEVMDKIRKEG 450
Query: 261 FVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATN 320
+ P SEVL +MD+EEK L H+EKLA+ +GL+ G I I+KNLR C DCH
Sbjct: 451 YDPRVSEVLLEMDDEEKAVQLLHHSEKLALAYGLIRIGHGSTIWIVKNLRSCEDCHEFMK 510
Query: 321 IISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ISK+ R+ VV DR RFHHFKNG CSCKD+W
Sbjct: 511 LISKICKRDIVVRDRIRFHHFKNGECSCKDYW 542
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 7 CEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMA 66
C++A+ +F +++ G+ D+ T+ ++L AC + G + G L + ++ GM
Sbjct: 250 CKDAIDMFVDMESSGVKPDERTVTTVLTACRNAGLIREGFMLFSDVQRR-------YGMK 302
Query: 67 LKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
+ L+ +LA G+ +A ++ M I +PDA+ + ++ AC G
Sbjct: 303 -PSIQHFGCLVDLLARAGRLKEAEDFVNAMPI---EPDAVLWRTLIWACKVHG 351
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 212/391 (54%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
EAL L R + +G+ VT+VS + A GAL G LH Y ++ L +L
Sbjct: 250 EALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKLKTSLL 309
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG-VKPDA 105
+++++ A+I M G + A E F M+ V PD
Sbjct: 310 DMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQVMPDH 369
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
ITFVGVL AC+H G+V E F+LM Y I+P ++HY CLV +LG +GR +A ++IK
Sbjct: 370 ITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRFKEASDVIK 429
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
M + D + G LL C+IH N+E AE A +L+EL P++ G+YV+LSN Y+ S KW++
Sbjct: 430 GMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNIYAQSGKWEE 489
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
R+R+LM R +KK C IE+ G H F+ + G+
Sbjct: 490 AARVRKLMTNRGLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEELERLEGLISQTGY 549
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
VP+ + V +++++EK + H+E+LAI FGL+S PG + + KNLRVC DCH +
Sbjct: 550 VPDTTSVFHNVEDDEKRNMVRGHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKL 609
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS++ RE ++ D NR+HHF NG CSCKD W
Sbjct: 610 ISQIEQREIIIRDVNRYHHFVNGECSCKDHW 640
>gi|334183024|ref|NP_174678.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806500|sp|Q9FX24.2|PPR71_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g34160
gi|332193557|gb|AEE31678.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 581
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 225/398 (56%), Gaps = 49/398 (12%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGM-WLHPYIMKKNIEVD 60
V + EA+ L++ ++ +G+ +VT+V+ L AC+HLG ++ G H Y I +
Sbjct: 186 VSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSN 245
Query: 61 VGLGM------------------ALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVK 102
+ M K V+T +I A+ G+ ++ALE F +++ G+K
Sbjct: 246 AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIK 305
Query: 103 PDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEE 162
PD ++++ L AC HAGLV+ +S FN M+ K G+ +++HYGC+V +L RAGR+ +A +
Sbjct: 306 PDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHD 364
Query: 163 LIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRK 222
+I +M M D + LLGA I+ ++E AE A++++ E+ +N G +V+LSN Y++ +
Sbjct: 365 IICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGR 424
Query: 223 WKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA----------------------- 259
WK V R+R+ M + +KK PG IE G +HEF +
Sbjct: 425 WKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIRE 484
Query: 260 -GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGV----LIRIIKNLRVCND 314
G+V VL D+ EEEKE AL H+EKLA+ +GL+ M G +R+I NLR+C D
Sbjct: 485 DGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLM-MMDGADEESPVRVINNLRICGD 543
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH ISK+Y RE +V DR RFH FK+GSCSC+DFW
Sbjct: 544 CHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 19/124 (15%)
Query: 6 ACEEALL------LFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
AC AL L ++ +GL+ D + +LL A + G L + Y +
Sbjct: 118 ACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDL-----ISAYKLFDE--- 169
Query: 60 DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
M ++DV + ALI L + ++A+E + M+ G++ +T V L ACSH G
Sbjct: 170 -----MPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLG 224
Query: 120 LVDE 123
V E
Sbjct: 225 DVKE 228
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 149/401 (37%), Positives = 218/401 (54%), Gaps = 52/401 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------ 54
Y+++ EE+L LF + +G ++ T LL AC + AL G LH + K
Sbjct: 297 YLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNH 356
Query: 55 ------------KNIEVD----VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
K+ +D V M +D++T A+I + G G +AL+ F +M
Sbjct: 357 VIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVS 416
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
P+ +TF+GVL A SH GLV E + N + + I P +EHY C+V +L RAG +
Sbjct: 417 AEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLD 476
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+AE +K + D LL AC +H N + R A+ +L++ P + G+Y +LSN Y+
Sbjct: 477 EAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTLLSNMYA 536
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+R+W V IR+LM ERNIKK PG +++ +H F+
Sbjct: 537 KARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYKKVQQLLA 596
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLV---SPMPGVLIRIIKNLRV 311
G+VPN + VL D+++E+KE L+ H+EKLA+ +GL+ SP P IRIIKNLR+
Sbjct: 597 LIKPLGYVPNIASVLHDVEDEQKEGYLSYHSEKLALAYGLMKIPSPAP---IRIIKNLRM 653
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C+DCHTA +ISKV NR +V D NRFHHF++GSC+C D W
Sbjct: 654 CDDCHTAVKLISKVTNRLIIVRDANRFHHFRDGSCTCLDHW 694
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 79/194 (40%), Gaps = 35/194 (18%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
VE EEA+ + R + + + D VT V ++ C + L++G+ +H +++ + D
Sbjct: 197 VESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDE 256
Query: 62 GLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+G L ++V+ TAL+ G ++L F M
Sbjct: 257 FVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDRE 316
Query: 100 GVKPDAITFVGVLVACS------HAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGR 153
G P+ TF +L AC+ H L+ R+ EK G + + L+ + +
Sbjct: 317 GTLPNEYTFAVLLNACAGIAALRHGDLLHARV-------EKLGFKNHVIVRNALINMYSK 369
Query: 154 AGRIAKAEELIKNM 167
+G I + + +M
Sbjct: 370 SGSIDSSYNVFTDM 383
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 213/399 (53%), Gaps = 50/399 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ ++AL +F+++Q + + +++T+ ++L AC LGA G +H I + D
Sbjct: 341 YVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKAD 400
Query: 61 V--------------------GLGMALKD--VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V G+ A++D +++ + LI A G LE+F+E+
Sbjct: 401 VVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQ 460
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ D +T V L ACSH G++ E + F M +G+ P H+ C+V +L RAGR+
Sbjct: 461 EGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLE 520
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYV-ILSNRY 217
AE LI +MP D LL C++H++ + A R A +L EL ++ S V +LSN Y
Sbjct: 521 AAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVY 580
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ + +W V++ R A R K PGC IE++ VHEFV
Sbjct: 581 AEAGRWDDVRKTRNRRAAR---KNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLS 637
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
AG+VP+ VL ++ EEEKE L H+EKLAI +GL+S PG + I+KNLR C
Sbjct: 638 KQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACV 697
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A IS++ R+ VV D RFHHF+NGSCSCKD+W
Sbjct: 698 DCHAAAKFISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 63/142 (44%), Gaps = 23/142 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + A +AL LF+ + + VT + LL ACT+L LE G +H + + E D
Sbjct: 239 YAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESD 298
Query: 61 VGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ +G L +DV+T LIV GQ AL+ F +MQ
Sbjct: 299 LVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQ 358
Query: 98 IRGVKPDAITFVGVLVACSHAG 119
+ V P+ IT VL AC+ G
Sbjct: 359 LENVAPNEITLSNVLSACAVLG 380
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 26/141 (18%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI-EVDVGLGMAL 67
EAL +R + +GL D V + C+ L+ G LH I++ + E D+ LG AL
Sbjct: 41 EALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTAL 100
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR---GVK 102
K ++T ALI + G AL+ + +M + G+K
Sbjct: 101 ITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMK 160
Query: 103 PDAITFVGVLVACSHAGLVDE 123
PDAITF L ACS G + +
Sbjct: 161 PDAITFSSALYACSVVGDISQ 181
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 25/133 (18%)
Query: 10 ALLLFREVQHK---GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMA 66
AL +++++ K G+ D +T S L AC+ +G + G + + D + A
Sbjct: 144 ALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNA 203
Query: 67 L----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
L +DV+ +I A G +ALE F M KP+
Sbjct: 204 LINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPN 263
Query: 105 AITFVGVLVACSH 117
+TF+G+L AC++
Sbjct: 264 VVTFIGLLTACTN 276
>gi|414879943|tpg|DAA57074.1| TPA: hypothetical protein ZEAMMB73_804341 [Zea mays]
Length = 1056
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 147/397 (37%), Positives = 214/397 (53%), Gaps = 53/397 (13%)
Query: 9 EALLLFREVQH---KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK------NIEV 59
+AL L+R ++ G+ D VT+V +L + HLGA VG Y++++ N+++
Sbjct: 660 DALDLYRRMRSPEGSGVEPDAVTIVGVLSSAAHLGARGVGFDAEHYVVQRLPGFRTNVQL 719
Query: 60 DVGL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV 101
L M K +++ TALI M G G A+ F M G+
Sbjct: 720 CNALINFHARCGSLPRAQQLFDEMPAKSIVSWTALITGHGMHGNGGVAVSLFERMVSEGI 779
Query: 102 KPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAE 161
PD + VGVL ACSHAGL DE +F+ M Y +RP++EHY C+V +LGRAGR+ +A
Sbjct: 780 HPDNVAMVGVLSACSHAGLYDEGRMYFSTMESVYKLRPTLEHYTCIVDLLGRAGRLEEAR 839
Query: 162 ELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSR 221
ELI +MPM D V G LLGAC+IH N+E E A +++EL P N G YV++SN Y+ +
Sbjct: 840 ELISSMPMPADGAVWGALLGACKIHKNVEIGEEAFARVVELEPRNVGYYVLMSNIYTDTG 899
Query: 222 KWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFD---------- 271
+ V R+R +M +R +KK PGC +E +G VH F+ ++ +++
Sbjct: 900 QLDCVARVRAVMRKRGLKKEPGCSYVEHNGRVHLFMADDHSHPQARRIYELVTRLELMVK 959
Query: 272 ----------------MDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
M++E + + H+EKLA+ FGL++ G I +IKNLRVC DC
Sbjct: 960 EKSGVRESVVAVPKGRMEKEAAQPLVGFHSEKLAVAFGLLNTEAGSEIVVIKNLRVCGDC 1019
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
H+ +S NR +V D +RFH F G CSCKD+W
Sbjct: 1020 HSFLKAVSATTNRSFLVRDASRFHRFDGGVCSCKDYW 1056
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 260 bits (664), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 147/399 (36%), Positives = 215/399 (53%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV + +AL +F ++ GL D VT+VS+L A L L+ G +H +I++K ++
Sbjct: 437 YVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILE 496
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L D ++ TA+I M G G A+E F M+
Sbjct: 497 GSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKD 556
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ PD ITF+ +L ACSH+GLV+E S +M +Y + P EHY CLV +LGR +
Sbjct: 557 EKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLE 616
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +++K+M V LLGACRIH N E E AA++LLEL DN G+YV++SN ++
Sbjct: 617 EAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFA 676
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ +WK V+ +R M + K PGC IEV +H F+
Sbjct: 677 ANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTE 736
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ G+V VL ++ EEEK L H+E+LAI +GL++ G IR+ KNLRVC
Sbjct: 737 KLKREGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLLATAEGTPIRVTKNLRVCG 796
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+ ++S+ + RE +V D +RFHHFK+G CSC DFW
Sbjct: 797 DCHSFCTLVSRFFERELIVRDASRFHHFKDGMCSCGDFW 835
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + C EAL LF E+ G+ + T + L AC +++GM +H I+K +D
Sbjct: 135 YSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLD 194
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL KD++T +++ G ++ALE+FY++Q
Sbjct: 195 VYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQN 254
Query: 99 RGVKPDAITFVGVLVACSHAG 119
+KPD ++ + ++VA G
Sbjct: 255 ADLKPDQVSIISIIVASGRLG 275
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 24/186 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------ 54
Y ++ +AL L R++Q +G+ D + S+LLAC L L +H Y ++
Sbjct: 337 YAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDP 396
Query: 55 --KNIEVDV----GL---------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+N +DV G+ + KDV++ T++I G NKALE F M+
Sbjct: 397 VLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKET 456
Query: 100 GVKPDAITFVGVLVA-CSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++PD +T V +L A CS + L + H ++ + + + SI + LV + R G +
Sbjct: 457 GLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISN--TLVDMYARCGSVE 514
Query: 159 KAEELI 164
A ++
Sbjct: 515 DAYKIF 520
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 22/137 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
++++ EAL F ++Q+ L D+V+++S+++A LG L G +H Y +K + +
Sbjct: 236 FIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSN 295
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G MA KD+++ T A +ALE ++Q+
Sbjct: 296 ILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQM 355
Query: 99 RGVKPDAITFVGVLVAC 115
G+ DA +L+AC
Sbjct: 356 EGMDVDATMIGSILLAC 372
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 12/131 (9%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV + AL ++RE++H G++ D T LL AC + L G +H +K +
Sbjct: 33 YVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHGLAIKYGCD-- 90
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
V + +L+ + A C N A + F M +R D +++ ++ A S G+
Sbjct: 91 -------SFVFVVNSLVALYAKCNDINGARKLFDRMYVRN---DVVSWNSIISAYSGNGM 140
Query: 121 VDERISHFNLM 131
E + F+ M
Sbjct: 141 CTEALCLFSEM 151
>gi|357158917|ref|XP_003578281.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 547
Score = 260 bits (664), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 147/394 (37%), Positives = 206/394 (52%), Gaps = 80/394 (20%)
Query: 8 EEALLLFRE-VQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMA 66
EEA+ +F+E + + D+VT+VS++ A +LGAL G W H Y+ +K IEV+ L A
Sbjct: 185 EEAIAVFQEMLACQECQPDRVTLVSIISAIAYLGALAQGFWAHAYVCRKGIEVEEKLSSA 244
Query: 67 L-----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
L + V T A+I G +ALE F M+ G P
Sbjct: 245 LINMYSKCGFIEGAVYVFENSCAMRSVDTWNAMITGFTANGCSERALELFTRMESTGFVP 304
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
+ ITF VL ACSH G V+E G KAE +
Sbjct: 305 NKITFNSVLNACSHGGFVEE-------------------------------GLFEKAEVI 333
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
++ MPM D V L+GACR + N + ++A ++L+E P++ YV+LSN Y+ W
Sbjct: 334 MQMMPMEPDASVWKALVGACRTYKNFKLGKKAGRRLIEAAPNDHTGYVLLSNIYALDGNW 393
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------------A 259
K V +R+ M + ++K PG IEVDGV+HEF+ A
Sbjct: 394 KGVHNVRKRMFDSGVQKVPGSSSIEVDGVIHEFISGDKSHSRKKDVYEMLGEICQQLKIA 453
Query: 260 GFVPNKSEVLFDMDEEE-KETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTA 318
G+ P+ S+VL D+D+E+ KE++L LH+EKLAI FGL+S PG IR++KNLRVC DCH A
Sbjct: 454 GYAPDTSQVLLDIDDEDVKESSLALHSEKLAIAFGLISTAPGTPIRVVKNLRVCGDCHNA 513
Query: 319 TNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
++SK+Y R +V D NRFH F GSCSC+D+W
Sbjct: 514 IKLLSKIYGRSIIVRDANRFHCFSEGSCSCRDYW 547
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 260 bits (664), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 213/399 (53%), Gaps = 50/399 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ ++AL +F+++Q + + +++T+ ++L AC LGA G +H I + D
Sbjct: 341 YVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKAD 400
Query: 61 V--------------------GLGMALKD--VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V G+ A++D +++ + LI A G LE+F+E+
Sbjct: 401 VVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQ 460
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ D +T V L ACSH G++ E + F M +G+ P H+ C+V +L RAGR+
Sbjct: 461 EGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLE 520
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYV-ILSNRY 217
AE LI +MP D LL C++H++ + A R A +L EL ++ S V +LSN Y
Sbjct: 521 AAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVY 580
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------- 257
+ + +W V++ R A R K PGC IE++ VHEFV
Sbjct: 581 AEAGRWDDVRKTRNRRAAR---KNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLS 637
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
AG+VP+ VL ++ EEEKE L H+EKLAI +GL+S PG + I+KNLR C
Sbjct: 638 KQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACV 697
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH A IS++ R+ VV D RFHHF+NGSCSCKD+W
Sbjct: 698 DCHAAAKFISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 63/142 (44%), Gaps = 23/142 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + A +AL LF+ + + VT + LL ACT+L LE G +H + + E D
Sbjct: 239 YAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESD 298
Query: 61 VGLG-----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ +G M +DV+T LIV GQ AL+ F +MQ
Sbjct: 299 LVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQ 358
Query: 98 IRGVKPDAITFVGVLVACSHAG 119
+ V P+ IT VL AC+ G
Sbjct: 359 LENVAPNEITLSNVLSACAVLG 380
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 26/141 (18%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI-EVDVGLGMAL 67
EAL +R + +GL D V + C+ L+ G LH I++ + E D+ LG AL
Sbjct: 41 EALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTAL 100
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR---GVK 102
K ++T ALI + G AL+ + +M + G+K
Sbjct: 101 ITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMK 160
Query: 103 PDAITFVGVLVACSHAGLVDE 123
PDAITF L AC+ G + +
Sbjct: 161 PDAITFSSALYACTVVGDISQ 181
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 25/133 (18%)
Query: 10 ALLLFREVQHK---GLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMA 66
AL +++++ K G+ D +T S L ACT +G + G + + D + A
Sbjct: 144 ALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNA 203
Query: 67 L----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
L +DV+ +I A G +ALE F M KP+
Sbjct: 204 LINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPN 263
Query: 105 AITFVGVLVACSH 117
+TF+G+L AC++
Sbjct: 264 VVTFIGLLTACTN 276
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 260 bits (664), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 142/400 (35%), Positives = 213/400 (53%), Gaps = 49/400 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ E+ L LF E+ + D T S+L AC +L +L +G LH I++ +
Sbjct: 417 YVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSN 476
Query: 61 VGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
V G AL D+ ++ ALI A G G AL F +M
Sbjct: 477 VFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIH 536
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G++P++++F+ +L ACSH GLV+E + +FN M++ Y + P EHY +V +L R+GR
Sbjct: 537 SGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFD 596
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLEL--LPDNGGSYVILSNR 216
+AE+L+ MP D + +L +CRIH N E A +AA QL + L D YV +SN
Sbjct: 597 EAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRD-AAPYVSMSNI 655
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+++ +W V ++++ + ER I+K P +E+ H F
Sbjct: 656 YAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDEL 715
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVC 312
+ G+ P+ + L ++DEE K +L H+E++AI F L+S G I ++KNLR C
Sbjct: 716 EKQMEEQGYKPDSTCALHNVDEEVKVESLKYHSERIAIAFALISTPKGSPILVMKNLRAC 775
Query: 313 NDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
NDCH A +ISK+ NRE V D +RFHHF +GSCSCKD+W
Sbjct: 776 NDCHAAIKVISKIVNREITVRDSSRFHHFTDGSCSCKDYW 815
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 22/136 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV- 59
Y + + EA LF ++ G+ D +T+ +LL T ++ +H +++K +
Sbjct: 114 YAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDST 173
Query: 60 ---------------DVGLG------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+GL MA KD +T AL+ + G + A+ F++MQ
Sbjct: 174 LMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQD 233
Query: 99 RGVKPDAITFVGVLVA 114
G +P TF VL A
Sbjct: 234 LGFRPSEFTFAAVLTA 249
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 25/185 (13%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EE+L LFRE+Q + +LL + LE+G +H + + +V +G +L
Sbjct: 323 EESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSL 382
Query: 68 KDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D+ + TALI G L+ F EM + D+
Sbjct: 383 VDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADS 442
Query: 106 ITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
T+ +L AC++ A L + H ++ + G ++ LV + + G I +A ++
Sbjct: 443 ATYASILRACANLASLTLGKQLHSRII--RSGCLSNVFSGSALVDMYAKCGSIKEALQMF 500
Query: 165 KNMPM 169
+ MP+
Sbjct: 501 QEMPV 505
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 260 bits (664), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 223/397 (56%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V++ EEA L+F+++Q + D TMVSL+ AC+HL AL+ G H ++ + + ++
Sbjct: 384 VQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALET 443
Query: 62 GL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ M +DV++ +I + G G +A F M+ +
Sbjct: 444 SICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQ 503
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G PD +TF+ ++ ACSH+GLV E F+ M+ KYGI P +EHY C+V +L R G + +
Sbjct: 504 GFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDE 563
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A + I++MP+ D V G LLGACRIH N++ ++ ++ + +L P+ G++V+LSN +S+
Sbjct: 564 AYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSA 623
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
+ ++ + +R + + KK PG IE++G +H FV
Sbjct: 624 AGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVD 683
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
K G+ + S VL D++EEEKE AL H+EKLAI FG++S I + KNLRVC DC
Sbjct: 684 IKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDC 743
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
HTA ++ V NR +V D NRFHHFKNG CSC +FW
Sbjct: 744 HTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 26/184 (14%)
Query: 9 EALLLFREVQHKGLTGDKVTMV-SLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG--- 64
EA LF+++ +GL T V S L C L L +G LH I K I D+
Sbjct: 289 EAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSL 348
Query: 65 -------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+A+KD ++ AL+ G+ +A F +MQ ++PD
Sbjct: 349 LSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDI 408
Query: 106 ITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
T V ++ ACSH A L + SH +++ + SI L+ + + G+I + ++
Sbjct: 409 ATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSI--CNSLIDMYAKCGKIDLSRQVF 466
Query: 165 KNMP 168
MP
Sbjct: 467 DKMP 470
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 79/201 (39%), Gaps = 30/201 (14%)
Query: 19 HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD------------------ 60
H GL + T+VSLL GAL G +H Y ++ +E +
Sbjct: 195 HGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCK 254
Query: 61 -------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV-KPDAITFVGVL 112
V GM +++ +T +ALI +C + +A F +M + G+ A + L
Sbjct: 255 QLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASAL 314
Query: 113 VACSHAGLVDERI-SHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMAL 171
C A L D + + + + K GI + L+ + +AG I +A + +
Sbjct: 315 RVC--ASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVK- 371
Query: 172 DHFVLGGLLGACRIHDNLEAA 192
D G LL C + E A
Sbjct: 372 DTISYGALLSGCVQNGKAEEA 392
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 260 bits (664), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 223/397 (56%), Gaps = 46/397 (11%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V++ EEA L+F+++Q + D TMVSL+ AC+HL AL+ G H ++ + + ++
Sbjct: 384 VQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALET 443
Query: 62 GL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ M +DV++ +I + G G +A F M+ +
Sbjct: 444 SICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQ 503
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
G PD +TF+ ++ ACSH+GLV E F+ M+ KYGI P +EHY C+V +L R G + +
Sbjct: 504 GFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDE 563
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A + I++MP+ D V G LLGACRIH N++ ++ ++ + +L P+ G++V+LSN +S+
Sbjct: 564 AYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSA 623
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
+ ++ + +R + + KK PG IE++G +H FV
Sbjct: 624 AGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVD 683
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
K G+ + S VL D++EEEKE AL H+EKLAI FG++S I + KNLRVC DC
Sbjct: 684 IKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDC 743
Query: 316 HTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
HTA ++ V NR +V D NRFHHFKNG CSC +FW
Sbjct: 744 HTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 26/184 (14%)
Query: 9 EALLLFREVQHKGLTGDKVTMV-SLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG--- 64
EA LF+++ +GL T V S L C L L +G LH I K I D+
Sbjct: 289 EAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSL 348
Query: 65 -------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+A+KD ++ AL+ G+ +A F +MQ ++PD
Sbjct: 349 LSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDI 408
Query: 106 ITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
T V ++ ACSH A L + SH +++ + SI L+ + + G+I + ++
Sbjct: 409 ATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSI--CNSLIDMYAKCGKIDLSRQVF 466
Query: 165 KNMP 168
MP
Sbjct: 467 DKMP 470
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 76/192 (39%), Gaps = 30/192 (15%)
Query: 19 HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD------------------ 60
H GL + T+VSLL GAL G +H Y ++ +E +
Sbjct: 195 HGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCK 254
Query: 61 -------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV-KPDAITFVGVL 112
V GM +++ +T +ALI +C + +A F +M + G+ A + L
Sbjct: 255 QLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASAL 314
Query: 113 VACSHAGLVDERI-SHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMAL 171
C A L D + + + + K GI + L+ + +AG I +A + +
Sbjct: 315 RVC--ASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVK- 371
Query: 172 DHFVLGGLLGAC 183
D G LL C
Sbjct: 372 DTISYGALLSGC 383
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 260 bits (664), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 128/310 (41%), Positives = 185/310 (59%), Gaps = 25/310 (8%)
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRG-VKPDAITFVGVLVACSHAGLVDERIS 126
+++++ A+I M G ++AL F +M+ V PD ITFVGVL AC+H G+V+E
Sbjct: 328 RELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKE 387
Query: 127 HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIH 186
F LM Y I+P+++HY C++ +LG GR +A +LIK M + D + G LL C+IH
Sbjct: 388 FFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIH 447
Query: 187 DNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCIL 246
N+E E A Q+L+EL P++ G+YV LSN Y+ S KW+K R+R+LM R +KK C
Sbjct: 448 KNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEKAARVRKLMTNRGLKKILACSW 507
Query: 247 IEVDGVVHEFV------------------------KAGFVPNKSEVLFDMDEEEKETALN 282
IE+ G H F+ AG+VP+ V ++D++EK +
Sbjct: 508 IELKGKTHGFLVGDASHPRSDEIYGELERLEGLMSDAGYVPDIIPVFHNVDDDEKRNMVR 567
Query: 283 LHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFK 342
H+E+LAI FGL+S PG + + KNLRVC DCH +IS++ RE ++ D NR+HHF
Sbjct: 568 SHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQIVQREIIIRDVNRYHHFV 627
Query: 343 NGSCSCKDFW 352
NG CSCKD+W
Sbjct: 628 NGECSCKDYW 637
>gi|242054799|ref|XP_002456545.1| hypothetical protein SORBIDRAFT_03g038140 [Sorghum bicolor]
gi|241928520|gb|EES01665.1| hypothetical protein SORBIDRAFT_03g038140 [Sorghum bicolor]
Length = 640
Score = 260 bits (664), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 151/407 (37%), Positives = 217/407 (53%), Gaps = 57/407 (14%)
Query: 1 YVEDSACEEALLLFREVQH---KGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK-- 55
+ ++ +AL L+R ++ G+ D VT+V +L + HLGA VG + Y+ ++
Sbjct: 236 HAQNGLAVDALELYRRMRSPEGSGVEPDAVTIVGVLSSAAHLGARGVGFDVEHYVRQRIP 295
Query: 56 NIEVDVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYF 93
+V L AL K +++ TALI M G G+ A+ F
Sbjct: 296 GFHTNVQLCNALINFHARCGSLPRAQQLFDEMPRKSIVSWTALITGHGMHGNGDVAVSLF 355
Query: 94 YEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGR 153
M G++PD + V + ACSHAGL DE +F+ M Y +RP++EHY C+V +LGR
Sbjct: 356 ERMVSEGIRPDNVAMVALFSACSHAGLYDEGRRYFSAMESVYKLRPTLEHYTCMVDLLGR 415
Query: 154 AGRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVIL 213
AGR+ +A ELI +MPM D V G LLGAC+IH N++ E A +++EL P N G YV++
Sbjct: 416 AGRLEEARELISSMPMPADGAVWGALLGACKIHKNVDVGEEAFTRVIELEPKNVGYYVLM 475
Query: 214 SNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------- 257
SN Y+ + + V R+R +M ER +KK PGC +E G VH F+
Sbjct: 476 SNIYTDTGQLDCVARVRAMMRERGLKKEPGCSYVEHKGRVHLFMADDHSHPQARRIYELV 535
Query: 258 ---------KAGFVPNKSEVLFDMDEEEKETA---LNLHTEKLAITFGLVSPMPGVLIRI 305
K+G +SEV EK A + +H+EKLA+ FGL++ G I +
Sbjct: 536 IRLELMVKEKSGM--RESEVAAAKGRMEKAAAQPLVGIHSEKLAVAFGLLNTEAGSEIVV 593
Query: 306 IKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IKNLRVC DCH+ ++S NR +V D +RFH F G CSCKD+W
Sbjct: 594 IKNLRVCGDCHSFLKVVSATTNRAFLVRDASRFHRFDGGVCSCKDYW 640
>gi|125572887|gb|EAZ14402.1| hypothetical protein OsJ_04322 [Oryza sativa Japonica Group]
Length = 490
Score = 260 bits (664), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 134/308 (43%), Positives = 178/308 (57%), Gaps = 25/308 (8%)
Query: 70 VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISHFN 129
+T TALIV A G+G ++L + +M G +PD +TFVG+L ACSHAGL+D +HF
Sbjct: 183 AITWTALIVGYAQNGRGRESLAVYADMARSGCRPDYVTFVGLLFACSHAGLLDAGRAHFQ 242
Query: 130 LMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMA-LDHFVLGGLLGACRIHDN 188
M ++GI P +HY C+V +LGRAGR+ +A +L+ P A LD V LL ACR H N
Sbjct: 243 SMQSEHGISPGPDHYACMVDLLGRAGRLGEAVDLLDRSPAAELDATVWKALLAACRTHRN 302
Query: 189 LEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCILIE 248
AERAA + L P + YV+LSN YS +R+W V R+R LM R I K PGC +
Sbjct: 303 AALAERAAGMVWRLDPTDAMPYVMLSNLYSRARRWGDVARVRALMRSRGISKEPGCSWVV 362
Query: 249 VDGVVHEF-----------------------VKA-GFVPNKSEVLFDMDEEEKETALNLH 284
V GV H F ++A G VP+ L D E +E L H
Sbjct: 363 VAGVTHVFHAGDRDHQRAAEIYRKAEEMAARIRARGHVPDTEWALQDEAPEGREMGLAHH 422
Query: 285 TEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHFKNG 344
E+LA+ FGL++ IR+ KNLRVC DCH A ++++VY RE ++ D N FHH K+G
Sbjct: 423 GERLAVAFGLLAVPAAAPIRVYKNLRVCGDCHAAIKMVAEVYGREIILRDSNCFHHMKDG 482
Query: 345 SCSCKDFW 352
SCSC D+W
Sbjct: 483 SCSCGDYW 490
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 260 bits (664), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 146/390 (37%), Positives = 213/390 (54%), Gaps = 46/390 (11%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALK 68
++L F ++Q +G+ + ++ LL AC L L+ G +H ++ DV + AL
Sbjct: 524 DSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALI 583
Query: 69 DVMTLTA----------------------LIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
D+ + ++ +I+ A+ G G +A+ F EMQ GV PDAI
Sbjct: 584 DMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAI 643
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TF +L AC ++GL+ E +F+ M Y I P +EHY C+V +LGRAG + +A +LI
Sbjct: 644 TFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHT 703
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP+ D + G LLG+CRIH NL+ AE AA+ L +L P+N +Y+++ N YS +W+ +
Sbjct: 704 MPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDM 763
Query: 227 KRIRELMAERNIK---------------------KP---PGCILIEVDGVVHEFVKAGFV 262
+RELM ++ KP G I E+ +V E K G+V
Sbjct: 764 DHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYV 823
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ + V +MDE EK+ L HTEKLAIT+GL+ G IR+IKN R+C+DCH+A I
Sbjct: 824 PDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYI 883
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S V RE + D RFHHF+ G CSC DFW
Sbjct: 884 SLVKARELFLRDGVRFHHFREGKCSCNDFW 913
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 23/170 (13%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EE L + + +Q +G + +M S+L A + LG L +G H Y+++ + DV +G +L
Sbjct: 352 EEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSL 411
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+++ +L+ + G AL +M+ G+KPD
Sbjct: 412 IDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDL 471
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
+T+ G++ + G E ++ + ++ G+ P++ + L+ +AG
Sbjct: 472 VTWNGMISGYAMWGCGKEALAVLH-QTKSLGLTPNVVSWTALISGSSQAG 520
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 77/183 (42%), Gaps = 23/183 (12%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
++ ++ + LFR++Q L + T+V +L AC +GAL +H Y+ + ++ DV
Sbjct: 210 LQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDV 269
Query: 62 GL----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
L M ++ + ++I A G N A FYE++
Sbjct: 270 SLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESS 329
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
+KPD +T+ +L G +E ++ M + G +P+ ++ + G +
Sbjct: 330 DMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGE-GFKPNSSSMTSVLQAISELGFLNM 388
Query: 160 AEE 162
+E
Sbjct: 389 GKE 391
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 88/216 (40%), Gaps = 36/216 (16%)
Query: 11 LLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL--- 67
L +F+E+ KG+ D L CT + + +GM +H ++K+ ++DV L AL
Sbjct: 118 LEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNF 177
Query: 68 -------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITF 108
+ + I++ + K +E F +MQ +K + T
Sbjct: 178 YGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATI 237
Query: 109 VGVLVACSHAGLVD--ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
V VL AC G ++ ++I + ++G+ + L+ + + G++ A + +
Sbjct: 238 VRVLQACGKMGALNAAKQIHGYVF---RFGLDSDVSLCNPLISMYSKNGKLELARRVFDS 294
Query: 167 M---------PMALDHFVLGGLLGACRIHDNLEAAE 193
M M + LG L A + LE+++
Sbjct: 295 MENRNTSSWNSMISSYAALGFLNDAWSLFYELESSD 330
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 17/120 (14%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLG----ALEVGMWLHPYIMKKNIEVDVGL 63
E+AL L +++ +G+ D VT ++ G AL V LH L
Sbjct: 453 EDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAV---LHQ---------TKSL 500
Query: 64 GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE 123
G+ +V++ TALI + G +L++F +MQ GV P++ + +L AC+ L+ +
Sbjct: 501 GLT-PNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQK 559
>gi|3377941|emb|CAA17526.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1331
Score = 260 bits (664), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 150/360 (41%), Positives = 209/360 (58%), Gaps = 47/360 (13%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMK---------KNIEVDVGL------------ 63
D T+VSLL AC +GAL +G +H Y++K N+ +D+
Sbjct: 4 DGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLF 63
Query: 64 -GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ-IRGVKPDAITFVGVLVACSHAGLV 121
M K+ ++ T+LIV LA+ G G +A+E F M+ G+ P ITFVG+L ACSH G+V
Sbjct: 64 DEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMV 123
Query: 122 DERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLG 181
E +F M E+Y I P IEH+GC+V +L RAG++ KA E IK+MPM + + LLG
Sbjct: 124 KEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLG 183
Query: 182 ACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKP 241
AC +H + + AE A Q+L+L P++ G YV+LSN Y+S ++W V++IR+ M +KK
Sbjct: 184 ACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKV 243
Query: 242 PGCILIEVDGVVHEFV------------------------KAGFVPNKSEVLFDMDEEEK 277
PG L+EV VHEF+ G+VP S V D++EEEK
Sbjct: 244 PGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEK 303
Query: 278 ETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNR 337
E A+ H+EK+AI F L+S I ++KNLRVC DCH A ++SKVYNRE VV DR+R
Sbjct: 304 ENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSR 363
>gi|357131197|ref|XP_003567226.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Brachypodium distachyon]
Length = 648
Score = 260 bits (664), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 144/390 (36%), Positives = 216/390 (55%), Gaps = 52/390 (13%)
Query: 14 FREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKK--NIEVDVGLGMAL---- 67
R G+ D VT+VS+L +C HLGA VG+ + Y+ K +V L AL
Sbjct: 260 MRGCDGHGVEPDAVTLVSVLSSCAHLGARSVGLGVERYMRGKLPGFRTNVQLCNALINFY 319
Query: 68 ------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFV 109
K +++ TALI M G G A+ F M G++PD + V
Sbjct: 320 ARCGCLPQAQQLFNEMPRKSIVSWTALITGYGMHGHGEVAINLFQTMVSEGIRPDNVAMV 379
Query: 110 GVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPM 169
G+L ACSHAG+ DE +F+ M Y +RP++EHY C+V +LGRAGR+ +A ELI +MPM
Sbjct: 380 GLLSACSHAGMYDEGRKYFSAMESAYQLRPTLEHYTCMVDLLGRAGRLKEARELISSMPM 439
Query: 170 ALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRI 229
D V G LLGAC+IH N+E E A + ++E+ P N G YV+++N Y+ + + V R+
Sbjct: 440 PADGAVWGALLGACKIHKNVEIGEEAFEHVIEVEPTNVGYYVLMANIYTDTGQLDCVVRV 499
Query: 230 RELMAERNIKKPPGCILIEVDGVVHEFVKAGFVPNKSEVLFDM----------------- 272
R +M ER +KK PGC +E G VH F+ +++ ++++
Sbjct: 500 RAMMRERGLKKEPGCSYVEHKGRVHLFMADDHSHPQAKRIYELVLKLEQMVKEKTDGTVG 559
Query: 273 -------DEEEKETALNL---HTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
+ ++TA+ L H+EKLA+ FG+++ + G I +IKNLRVC +CH+ +
Sbjct: 560 IQGGRMIEGHSEKTAVPLIGFHSEKLAVAFGMLNTV-GSEIAVIKNLRVCGNCHSFLKTV 618
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
S + NR +V D +RFH F++G+CSCKD+W
Sbjct: 619 SAIANRVFLVRDASRFHRFEDGACSCKDYW 648
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 260 bits (664), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 136/399 (34%), Positives = 220/399 (55%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGA-LEVGMWLHPYIMKKNIEV 59
Y + + A +F ++ GL ++ T+ S++ AC A +++G H +K
Sbjct: 480 YAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHD 539
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ + AL +D+++ +++ A G KAL+ F +M+
Sbjct: 540 ALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQME 599
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G++ D +TF+ V++ C+HAGLV+E +F+ M+ YGI P++EHY C+V + RAG++
Sbjct: 600 AEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKL 659
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
+A LI+ M V LLGAC++H N+E + AA++LL L P + +YV+LSN Y
Sbjct: 660 DEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIY 719
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------ 259
S++ KWK+ +R+LM + +KK GC I++ VH F+ +
Sbjct: 720 SAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMT 779
Query: 260 ------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
G+ P+ S L ++ EE+KE L +H+E+LA+ FGL++ PG + I KNLRVC
Sbjct: 780 TKLKQEGYCPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIATPPGAPLHIFKNLRVCG 839
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCHT ++SK+ +RE V+ D +RFHHF +G CSC DFW
Sbjct: 840 DCHTVIKMVSKIEDREIVMRDCSRFHHFNSGVCSCGDFW 878
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 70/174 (40%), Gaps = 26/174 (14%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-- 67
A LF ++ G+ + T ++L A + +H ++K N E +G AL
Sbjct: 392 AAALFSRMREDGVAPNDFTYSTILTA----SVASLPPQIHAQVIKTNYECTSIVGTALLA 447
Query: 68 --------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
KDV++ +A++ A G + A F +M + G+KP+ T
Sbjct: 448 SYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFT 507
Query: 108 FVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAE 161
V+ AC+ + F+ +S K+ ++ LV + R G I A+
Sbjct: 508 ISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQ 561
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 32 LLLACTH-LGALEVGMWLHPYIMKKNIEVD---VGLGMALKDVMTLTALIVVLAMCGQGN 87
L + C H G + VG L MK + VD V M ++V+T T+L+ G +
Sbjct: 128 LCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALS 187
Query: 88 KALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD 122
+E F+ M+ GV P+++TF VL + G+VD
Sbjct: 188 DVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVD 222
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 259 bits (663), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 141/391 (36%), Positives = 214/391 (54%), Gaps = 46/391 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVG----- 62
EEAL +F + +G+ + T S + A + ++ G +H I K + +
Sbjct: 657 EEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAI 716
Query: 63 -----------------LGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
L +++K+ ++ A+I + G G++AL+ F +M V+P+
Sbjct: 717 ISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNH 776
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+T VGVL ACSH GLVD+ I +F M+ +YG+ P EHY C+V +L RAG +++A++ I
Sbjct: 777 VTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFIL 836
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
MP+ D V LL AC +H N+E E AA LLEL P++ +YV+LSN Y+ RKW
Sbjct: 837 EMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDA 896
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------------KAGF 261
R+ M E+ +KK PG IEV +H F + G+
Sbjct: 897 RDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGY 956
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
V + +L ++ +E+K+ + +H+EKLAI+FGL+S + I ++KNLRVCNDCH
Sbjct: 957 VQDCFSLLSELQQEQKDPTIFIHSEKLAISFGLLSLPATMPINVMKNLRVCNDCHDWIKF 1016
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+SKV NRE +V D RFHHF+ G+CSCKD+W
Sbjct: 1017 VSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1047
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 101/230 (43%), Gaps = 37/230 (16%)
Query: 7 CE-EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL-- 63
CE EA+ LF ++ G+ S+L AC + +LE+G LH ++K D +
Sbjct: 251 CEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 310
Query: 64 --------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
M+ +D +T LI L+ CG G KA+E F MQ+ G++P
Sbjct: 311 ALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEP 370
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA--- 160
D+ T ++VACS G + + + K G + + G L+ + + I A
Sbjct: 371 DSNTLASLVVACSSDGTLFSG-QQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNY 429
Query: 161 --EELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLL--ELLPDN 206
E ++N+ + V GLL D+L + R +Q+ E++P+
Sbjct: 430 FLETEVENVVLWNVMLVAYGLL------DDLRNSFRIFRQMQIEEIVPNQ 473
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 24/204 (11%)
Query: 13 LFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV------------- 59
+FR++Q + + ++ T S+L C LG LE+G +H I+K + ++
Sbjct: 460 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYA 519
Query: 60 ---------DVGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVG 110
D+ + A KDV++ T +I +KAL F +M RG++ D +
Sbjct: 520 KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTN 579
Query: 111 VLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMA 170
+ AC+ + E + + G + LV + + G I +A L A
Sbjct: 580 AVSACAGLQALKEG-QQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEA-YLAFEQTEA 637
Query: 171 LDHFVLGGLLGACRIHDNLEAAER 194
D+ L+ + N E A R
Sbjct: 638 GDNIAWNALVSGFQQSGNNEEALR 661
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/191 (19%), Positives = 71/191 (37%), Gaps = 23/191 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + ++AL FR++ +G+ D+V + + + AC L AL+ G +H D
Sbjct: 549 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSD 608
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL D + AL+ G +AL F M
Sbjct: 609 LPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNR 668
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G+ + TF + A S + + + + K G E ++ + + G I+
Sbjct: 669 EGIDSNNFTFGSAVKAASETANMKQG-KQVHAVITKTGYDSETEVCNAIISMYAKCGSIS 727
Query: 159 KAEELIKNMPM 169
A++ + M
Sbjct: 728 DAKKQFLELSM 738
>gi|115441047|ref|NP_001044803.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|15408890|dbj|BAB64281.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113534334|dbj|BAF06717.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|125572632|gb|EAZ14147.1| hypothetical protein OsJ_04076 [Oryza sativa Japonica Group]
Length = 660
Score = 259 bits (663), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 159/401 (39%), Positives = 226/401 (56%), Gaps = 50/401 (12%)
Query: 1 YVEDSACEEALLLFREV--QHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE 58
Y ++ +A+LLF+E+ + L + VT+V +L A + AL G LH YI+++ +
Sbjct: 261 YAKNERPGDAILLFQEMVASDEDLVPNSVTIVCILHAFAGVNALGQGKLLHAYILRRGFD 320
Query: 59 VDVGLGMAL-----------------------KDVMTLTALIVVLAMCGQGNKALEYFYE 95
V + AL KDV++ LI M G G++A++ F +
Sbjct: 321 SLVSVLNALMAMYMKCGCLEAGRHIFDLIGHRKDVVSWNTLISGYGMHGFGHEAVQVFED 380
Query: 96 MQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
M GV P+ ITF+ VL ACSHAGLVDE F M + Y + P EHY C+V +LGRAG
Sbjct: 381 MTQMGVSPNIITFISVLGACSHAGLVDEGKRLFESMVD-YNVTPRAEHYACMVDLLGRAG 439
Query: 156 RIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSN 215
+ +A ELI+ M + V G LLGACRIH ++E AE A QL +L P N G+YV+L++
Sbjct: 440 HLDEAVELIQGMHIRPSPQVWGSLLGACRIHRHVEYAEMACSQLFDLEPRNAGNYVLLAD 499
Query: 216 RYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA---------------- 259
Y+ ++ +V +++L+ E ++K PGC IEV +H FV
Sbjct: 500 IYARAKLHSEVGVLKDLLEEHALEKVPGCSWIEVKKRLHMFVSVDNKNPQIEELQALIGE 559
Query: 260 --------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRV 311
G+VP+ VL+D++EEEKE L H+EKLA+ FGL++ G +IRI KNLR+
Sbjct: 560 FVTQMKNDGYVPDTGAVLYDIEEEEKEKILLGHSEKLAVAFGLINTGRGEVIRITKNLRL 619
Query: 312 CNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
C DCH+ T ISK RE +V D NRFHHF++G CSC D+W
Sbjct: 620 CEDCHSVTKFISKYAEREIIVRDVNRFHHFRDGICSCGDYW 660
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 200/372 (53%), Gaps = 47/372 (12%)
Query: 28 TMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-------------------- 67
T SL+ A +G L G LH +K D +G +L
Sbjct: 458 TFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEM 517
Query: 68 --KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERI 125
+V++ T++I LA G +ALE F++M GVKP+ +T++ VL ACSHAGLV E
Sbjct: 518 NDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGK 577
Query: 126 SHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRI 185
HF +M + +G+ P +EHY C+V +LGR+G + A + I MP +D V LLGAC+
Sbjct: 578 EHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKT 637
Query: 186 HDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCI 245
H+N++ E AA +++L P + YV+LSN Y+ + W +V RIR LM ++N+ K G
Sbjct: 638 HNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLS 697
Query: 246 LIEVDGVVHEFVKA------------------------GFVPNKSEVLFDMDEEEKETAL 281
+ VD +HEF G+VP+ S VL DM +E KE L
Sbjct: 698 WMHVDNTIHEFRAGDTSHPQAEEIYTKLETLIREIKVMGYVPDTSVVLHDMSDELKELCL 757
Query: 282 NLHTEKLAITFGLVSPMPGVL-IRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHH 340
H+EK+A+ FGL+S IRI KNLRVC DCH+A +SK RE ++ D NRFH
Sbjct: 758 LQHSEKIAVAFGLISCTSATKPIRIFKNLRVCVDCHSALKYVSKATGREIILRDSNRFHR 817
Query: 341 FKNGSCSCKDFW 352
K+G CSC ++W
Sbjct: 818 MKDGECSCGEYW 829
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 26/149 (17%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EA+ LF ++ G D+ T+ S+L ACT LG+ +G LH ++ +E D
Sbjct: 230 YAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESD 289
Query: 61 VGLGMALKD-------------------------VMTLTALIVVLAMCG-QGNKALEYFY 94
+ L D VM TAL+ G Q N+ + F
Sbjct: 290 SCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFC 349
Query: 95 EMQIRGVKPDAITFVGVLVACSHAGLVDE 123
+M G++P+ IT+ +L AC++ G D
Sbjct: 350 KMLNEGIRPNHITYSSMLKACANLGDQDS 378
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 53/135 (39%), Gaps = 24/135 (17%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLAC--THLGALEVGMWLHPYIMKKNIEVDVGLGMA 66
EAL LF E +GL + T+ + AC + L L G L DV +G A
Sbjct: 135 EALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGCA 194
Query: 67 LKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
L D V+ T LI A G ++A+E F +M G +PD
Sbjct: 195 LIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPD 254
Query: 105 AITFVGVLVACSHAG 119
T +L AC+ G
Sbjct: 255 QYTLSSMLSACTELG 269
>gi|224127907|ref|XP_002320193.1| predicted protein [Populus trichocarpa]
gi|222860966|gb|EEE98508.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 217/391 (55%), Gaps = 50/391 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
E++ F ++Q +G+ + T+ SLL C L L+ G +H ++K+ D+ + AL
Sbjct: 111 ESIEAFVQMQEEGIKPNSATISSLLRTCGGLSLLQKGKEIHCLSIRKSFIEDLYVATALI 170
Query: 68 --------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAIT 107
K + + +I+ A+ G G + + MQ G+ PDAIT
Sbjct: 171 DTYSKSGDLESAHKVFWSAEKTLASWNCMIMGFAINGCGREVIALLDGMQRAGILPDAIT 230
Query: 108 FVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
F +L C ++GLV+E F++MS YGI+P+IEHY C+ +LGRAG + +A + I+ M
Sbjct: 231 FTALLSGCKNSGLVEEGWKCFDMMSNDYGIKPTIEHYSCMADLLGRAGYLDEAWDFIQTM 290
Query: 168 PMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVK 227
P+ D V G +LG+CRIH N+E AE AA++L +L P N +YV++ + Y+ S +W+ V
Sbjct: 291 PIKPDASVWGAMLGSCRIHGNIEFAEIAAKELFKLEPYNSANYVLMLSLYAMSNRWEDVD 350
Query: 228 RIRELMAERNIKKPPGCILIEVDGVVH------------------------EFVKAGFVP 263
RI++LM R IK I++D VH E K G++P
Sbjct: 351 RIKDLMDTRGIKPRQVWSWIQIDQRVHLFSAGGIPHQDEGEIYYELYQLVSELKKFGYLP 410
Query: 264 NKSEVLFDMDEEEKETALNLHTEKLAITFGLV--SPMPGVLIRIIKNLRVCNDCHTATNI 321
+ + V ++DEEEK L HTEKLAIT+GL+ S P IR+IKN R+C+DCHTA +
Sbjct: 411 DVNCVYQNIDEEEKVKMLLSHTEKLAITYGLIKTSSAP---IRVIKNTRICSDCHTAAKL 467
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
IS V +RE + D RFHHFK G CSC D+W
Sbjct: 468 ISLVRSREIFLRDGVRFHHFKAGKCSCNDYW 498
Score = 37.7 bits (86), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWL-HPYIMKKNIEVDVGLGMA 66
+ A L ++ +G+ D +T SL+ + G + + L H D+ +
Sbjct: 40 DHAKRLLNRMKEEGIKPDLITWNSLVAGYSMRGHTKEALALIH----------DIKISGL 89
Query: 67 LKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDE 123
+V++ TALI + G ++++E F +MQ G+KP++ T +L C L+ +
Sbjct: 90 TPNVVSWTALISGCSQNGNYSESIEAFVQMQEEGIKPNSATISSLLRTCGGLSLLQK 146
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 212/399 (53%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV + EAL LF ++ G+ D +++VS+L A L AL+ G +H ++++K ++
Sbjct: 559 YVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLE 618
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
L L KD++ T++I M G G A++ F M+
Sbjct: 619 GSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMED 678
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ PD I FV VL ACSH+GL++E M +Y + P EHY CLV +LGRA +
Sbjct: 679 ESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLE 738
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + +K M + V LLGAC+IH N E E AAQ+LLE+ P+N G+YV++SN YS
Sbjct: 739 EAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYS 798
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
+ R+WK V+ +R M +KK PGC IEV VH F+
Sbjct: 799 AERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITE 858
Query: 258 ----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
+ G+V VL + EEEK L H+E+LAI +G+++ G +RI KNLRVC
Sbjct: 859 KLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCG 918
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH +ISK + RE V+ D NRFHHFK G CSC D W
Sbjct: 919 DCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 957
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 22/144 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+V++ EAL + E++ G D V ++S++ A G GM +H Y MK ++ D
Sbjct: 358 FVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSD 417
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G +L KDV++ T +I A G ++ALE F E+Q+
Sbjct: 418 LQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQL 477
Query: 99 RGVKPDAITFVGVLVACSHAGLVD 122
G+ D + +L+ACS L+
Sbjct: 478 EGIDLDVMMISSILLACSGLKLIS 501
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 21/132 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE-- 58
+ ++ + AL LFREVQ +G+ D + + S+LLAC+ L + +H YI++K +
Sbjct: 459 HAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDL 518
Query: 59 ---------------VDVGLGM----ALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
VD M KDV++ T++I G N+ALE F+ M+
Sbjct: 519 VLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKET 578
Query: 100 GVKPDAITFVGV 111
GV+PD+I+ V +
Sbjct: 579 GVEPDSISLVSI 590
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 22/141 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EAL LF E+Q L + T V+ L AC ++ GM++H ++K + ++
Sbjct: 257 YSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYIN 316
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + AL D ++ +++ G ++AL++++EM+
Sbjct: 317 VFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRD 376
Query: 99 RGVKPDAITFVGVLVACSHAG 119
G KPD + + ++ A + +G
Sbjct: 377 AGQKPDLVAVISIIAASARSG 397
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 26/191 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKN---- 56
YV + +L L+RE++ G+ D T +L AC L G +H +K+
Sbjct: 155 YVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSI 214
Query: 57 -IEVDVGLGMALK------------------DVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ +GM K DV++ ++I + GQ +AL F EMQ
Sbjct: 215 VFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQ 274
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERIS-HFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
+ P+ TFV L AC + + + + H ++ Y I + + L+ + R G+
Sbjct: 275 KASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVAN--ALIAMYARFGK 332
Query: 157 IAKAEELIKNM 167
+ +A + NM
Sbjct: 333 MGEAANIFYNM 343
>gi|326532424|dbj|BAK05141.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 223/398 (56%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ + A L+FR++Q + D TMVSL+ AC HL AL+ G H ++ + + +
Sbjct: 16 YVQNGMADAAFLVFRKMQVCNVEPDVATMVSLIPACAHLAALQHGKCSHGSVIVRGMAPE 75
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL +D+++ +I + G G +A F +M+
Sbjct: 76 TSICNALIDMYAKCGRIAFSRQIFDAMPSRDIVSWNTMIAGYGIHGLGKEATALFLDMKN 135
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+PD +TF+ ++ ACSH+GLV E F++M++KYGI P +EHY +V +L R G +
Sbjct: 136 HACEPDGVTFICLISACSHSGLVTEGKHWFHMMAQKYGITPRMEHYISMVDLLARGGFLD 195
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I++MPM D V G LL ACR+H N++ ++ A+ + +L P+ G++V+LSN +S
Sbjct: 196 EAYQFIQSMPMKADVRVWGALLAACRVHKNIDLGKQVARVIQKLGPEGTGNFVLLSNIFS 255
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ ++ + +R + E+ KK PGC IE++G +H F+
Sbjct: 256 AAGRFDEAAEVRIIQKEKGFKKSPGCSWIEINGSLHAFIGGDRSHPRSPEIYQELHNILV 315
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+ + S VL D++EEEKE AL H+EKLAI FG+++ I + KNLRVC D
Sbjct: 316 DINKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGILTLSEDKDIFVTKNLRVCGD 375
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHT +S V R+ +V D NRFHHFKNG CSC DFW
Sbjct: 376 CHTVIKYMSLVRRRDIIVRDANRFHHFKNGQCSCGDFW 413
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 214/398 (53%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV+ E A+ LF + + +VT S+L A L ALE G+ +H +K D
Sbjct: 414 YVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKD 473
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +L +D ++ A+I +M G +AL F MQ
Sbjct: 474 TVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQH 533
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
KP+ +TFVGVL ACS+AGL+ + +HF MS+ Y I+P IEHY C+V++LGR GR
Sbjct: 534 TDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFD 593
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A +LI + V LLGAC IH ++ AQ +LE+ P + ++V+LSN Y+
Sbjct: 594 EAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYA 653
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ +W V +R+ M ++ ++K PG +E GVVH F
Sbjct: 654 TAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLNK 713
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AG+VP+ + VL D+ ++EKE L +H+E+LA+ +GL+ IRIIKNLR+C D
Sbjct: 714 KTRDAGYVPDCNAVLLDVQDDEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNLRICID 773
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHT +ISKV RE V+ D NRFHHF++G CSC D+W
Sbjct: 774 CHTVMKLISKVVQREIVIRDINRFHHFRHGVCSCGDYW 811
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 85/192 (44%), Gaps = 27/192 (14%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E+ EE+L LF +++ G + T+ L +C L A VG +H +K + D
Sbjct: 212 YAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHD 271
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +G+AL D++ + +I A + +AL+ F M+
Sbjct: 272 LFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQ 331
Query: 99 RGVKPDAITFVGVLVACSHAGLVD--ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGR 156
V P+ TF VL AC+ + +D ++I L K+G+ ++ ++ + + G
Sbjct: 332 TSVVPNNFTFASVLQACASSVSLDLGKQIHSCVL---KFGLNSNVFVSNAIMDVYAKCGE 388
Query: 157 IAKAEELIKNMP 168
I + +L + +P
Sbjct: 389 IENSMKLFEELP 400
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 22/136 (16%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EAL LF ++ + + T S+L AC +L++G +H ++K + +
Sbjct: 313 YAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSN 372
Query: 61 VGLGMALKDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQI 98
V + A+ DV +T +IV G G +A+ F M
Sbjct: 373 VFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLE 432
Query: 99 RGVKPDAITFVGVLVA 114
++P +T+ VL A
Sbjct: 433 HDMQPTEVTYSSVLRA 448
>gi|15228954|ref|NP_191214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180975|sp|Q9LXY5.1|PP284_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g56550
gi|7594533|emb|CAB88058.1| putative protein [Arabidopsis thaliana]
gi|91806586|gb|ABE66020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646013|gb|AEE79534.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 581
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 139/392 (35%), Positives = 223/392 (56%), Gaps = 47/392 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHP----------------- 50
+AL +++ + ++G+ GD T+V+LL +C H+ AL +G+ LH
Sbjct: 190 NQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNAL 249
Query: 51 ---YIMKKNIEVDVGL--GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
Y ++E +G+ GM +DV+T ++I+ + G G +A+ +F +M GV+P+A
Sbjct: 250 IDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNA 309
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
ITF+G+L+ CSH GLV E + HF +MS ++ + P+++HYGC+V + GRAG++ + E+I
Sbjct: 310 ITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIY 369
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
D + LLG+C+IH NLE E A ++L++L N G YV++++ YS++ +
Sbjct: 370 ASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQA 429
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------KAGFVPNKSEVLFD 271
+R+L+ +++ PG IE+ VH+FV + G V N++ +
Sbjct: 430 FASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGY 489
Query: 272 MDEEEKETALNL-----------HTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATN 320
E+ TA L H+EKLAI +GL+ G +RI KNLRVC DCH+ T
Sbjct: 490 KPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTK 549
Query: 321 IISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+SK +NRE +V DR RFHHF +G CSC D+W
Sbjct: 550 YVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 139/376 (36%), Positives = 210/376 (55%), Gaps = 46/376 (12%)
Query: 2 VEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDV 61
V++ +E L F+++ + + V+ S++ AC HL L +G LH YI++ + +V
Sbjct: 273 VQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNV 332
Query: 62 GLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
+ M L D+++ TA+I+ A+ G A+ F M++
Sbjct: 333 FIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVE 392
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
GVKP+ + F+ VL ACSHAGLVDE +FN M++ Y I P +EHY + +LGR GR+ +
Sbjct: 393 GVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEE 452
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A E I +M + V LL ACR+H N+E AE+ +++L + P N G+YV+LSN YS+
Sbjct: 453 AYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSA 512
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
+ +WK +++R M ++ +KK P C IE+ VH FV
Sbjct: 513 AGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQ 572
Query: 258 --KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDC 315
+ G+V + +EVL D++EE+K L H+E+LAITFG++S G IR+ KNLRVC DC
Sbjct: 573 MEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDC 632
Query: 316 HTATNIISKVYNRETV 331
HTAT ISK+ RE V
Sbjct: 633 HTATKFISKIVGREIV 648
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 22/132 (16%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E+AL++ RE+ + L D T+ S+L L G +H Y ++ + DV +G +L
Sbjct: 178 EDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSL 237
Query: 68 KDV----------------------MTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
D+ ++ ++I G ++ L++F +M I +KP+
Sbjct: 238 IDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNH 297
Query: 106 ITFVGVLVACSH 117
++F ++ AC+H
Sbjct: 298 VSFSSIMPACAH 309
>gi|9279581|dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana]
Length = 717
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/391 (36%), Positives = 208/391 (53%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL----- 63
E LFR++Q + + T+ ++L AC+ + AL G +H I+K + DV L
Sbjct: 327 EMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLM 386
Query: 64 -----------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
M KD+ + ++ A+ G + + F M GV PD I
Sbjct: 387 DMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGI 446
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFV +L CS GL + +S F M ++ + P++EHY CLV ILGRAG+I +A ++I+
Sbjct: 447 TFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIET 506
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP + G LL +CR+H N+ E AA++L L P N G+YV++SN Y+ ++ W V
Sbjct: 507 MPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNV 566
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------------KAGF 261
+IRE+M +R +KK GC ++V + FV K+G+
Sbjct: 567 DKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGY 626
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
PN S VL D+DEE K + H+E+LA T+ L+ GV IRI KNLRVC DCH+ I
Sbjct: 627 SPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKI 686
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+S+V R V+ D RFHHF +G CSCKD+W
Sbjct: 687 VSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 717
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 101/238 (42%), Gaps = 29/238 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + +AL+++ ++ + ++ L AC L L VG +H I+K+ +VD
Sbjct: 218 YSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVD 277
Query: 61 ----------------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V GM+ ++V+T +LI VL+ + ++ F +MQ
Sbjct: 278 QVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQE 337
Query: 99 RGVKPDAITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+ T +L ACS A L+ + H ++ K +P + L+ + G+ G +
Sbjct: 338 EMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKE--KPDVPLLNSLMDMYGKCGEV 395
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE--LLPDNGGSYVIL 213
+ + M + D +L I+ N+E + ++E + PD G ++V L
Sbjct: 396 EYSRRVFDVM-LTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPD-GITFVAL 451
>gi|224139652|ref|XP_002323212.1| predicted protein [Populus trichocarpa]
gi|222867842|gb|EEF04973.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 222/399 (55%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + +EAL ++ ++++ + D T+V LL +C+H+GAL +G+ LH +K + +
Sbjct: 186 YSQAGYHQEALRVYDYMRNENVGVDGFTLVGLLSSCSHVGALNMGVKLHRIASEKGLLRN 245
Query: 61 VGLGMAL---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
V +G AL +D T ++IV + G G++A+ +F +M
Sbjct: 246 VFVGNALIDMYAKCGSLDGALEVFNGMPRDAFTWNSMIVGFGVHGFGDEAIYFFNQMLEA 305
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
GV+P++I F+G+L CSH GLV+E + F+ MS K+ ++P I+HYGC+V + GRAG++ K
Sbjct: 306 GVRPNSIAFLGLLCGCSHQGLVEEGVEFFHQMSSKFNVKPGIKHYGCIVDMYGRAGKLEK 365
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSS 219
A E+I + P D + LL + +IH N+ E A + L +L N G V+L+ Y+
Sbjct: 366 ALEIIGDSPWQDDPVLWRILLSSSKIHKNVVIGEIAMRNLSQLGAVNAGDCVLLATIYAG 425
Query: 220 SRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV---------------------- 257
+ + V R+R+L+ ++ IK PG IEV VH FV
Sbjct: 426 ANDEQGVARMRKLIKKQGIKTTPGWSWIEVSDQVHRFVVDDKSHPDSEMIYQKLEEVTHK 485
Query: 258 --KAGFVPNKSEVLF--DMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
AG+V +KS+ +F EE E++ H+EKLAI FGL G +RI+KNLRVC
Sbjct: 486 ATMAGYVEDKSQFIFHGSCSEECLESSSTYHSEKLAIAFGLAKTPEGTSLRIVKNLRVCR 545
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH T +S+ +NR+ +V DR RFHHFK G CSC+D+W
Sbjct: 546 DCHEFTKFVSRAFNRDIIVRDRLRFHHFKGGLCSCRDYW 584
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 92/224 (41%), Gaps = 26/224 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTG-DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV 59
+ + + +A+ + + ++G D T L AC + AL+ +H I++ E
Sbjct: 84 FAQSPSPVQAIFYYNRMLFDSVSGPDTFTFSFTLKACERIKALKKCEEVHGSIIRTGYER 143
Query: 60 DV----GL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
DV GL M +D++ A+I + G +AL + M+
Sbjct: 144 DVVVCTGLVRCYGRNGCVEIARMVFDNMPERDLVAWNAMISCYSQAGYHQEALRVYDYMR 203
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
V D T VG+L +CSH G ++ + + SEK G+ ++ L+ + + G +
Sbjct: 204 NENVGVDGFTLVGLLSSCSHVGALNMGVKLHRIASEK-GLLRNVFVGNALIDMYAKCGSL 262
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE 201
A E+ MP D F ++ +H + A Q+LE
Sbjct: 263 DGALEVFNGMPR--DAFTWNSMIVGFGVHGFGDEAIYFFNQMLE 304
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 152/402 (37%), Positives = 215/402 (53%), Gaps = 53/402 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y+ + +A+ L + KG D T ++L AC + LE GM +H ++ +E D
Sbjct: 515 YIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESD 574
Query: 61 VGLG----------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V +G M L++V + ++I A G G KAL+ F M +
Sbjct: 575 VVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMML 634
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G PD +TFVGVL ACSH G V+E HF MSE Y + P +EH+ C+V +LGRAG++
Sbjct: 635 DGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLD 694
Query: 159 KAEELIKNMPMALDHFVLGGLLGA-CRIHD-NLEAAERAAQQLLELLPDNGGSYVILSNR 216
+ + I +MPM + + +LGA CR + N E RAA+ LLEL P N +YV+L+N
Sbjct: 695 EVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANM 754
Query: 217 YSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV------------------- 257
Y+S KW+ V + R M E +KK GC + + VH FV
Sbjct: 755 YASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLREL 814
Query: 258 -----KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLV--SPMPGVLIRIIKNLR 310
AG++P LFD++ E KE L+ H+EK+A+ F L S +P IRI+KNLR
Sbjct: 815 NRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAFVLTRQSALP---IRIMKNLR 871
Query: 311 VCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
VC DCH+A ISK+ R+ V+ D NRFHHF++G CSC D+W
Sbjct: 872 VCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 913
>gi|297811673|ref|XP_002873720.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319557|gb|EFH49979.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 149/381 (39%), Positives = 211/381 (55%), Gaps = 57/381 (14%)
Query: 27 VTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV-------DVGLGMALKD---------- 69
VT+ S+L AC G L +G W+H Y +KK + + V +G AL D
Sbjct: 245 VTLCSMLSACAQSGNLVIGRWVHVYALKKAMMMGEEETYDGVMVGTALVDMYAKCGNIDS 304
Query: 70 ------------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSH 117
V+T AL LAM G+G ++ F EM +R VKPD +TF +L ACSH
Sbjct: 305 SIKVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPEM-VREVKPDDLTFTALLSACSH 363
Query: 118 AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLG 177
G+VDE F+ + + YG+ P ++HY C+V ILGRAGRI +AE L++ MP+ + VLG
Sbjct: 364 LGMVDEGWRCFHSL-QFYGLEPKVDHYACMVDILGRAGRIEEAEILMREMPVPPNEVVLG 422
Query: 178 GLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERN 237
LLG+C +H LE AER ++L+++ P + +++SN Y + + +R + R
Sbjct: 423 SLLGSCSVHGKLEIAERIKRELIQMSPGHTEYQILMSNMYVAEGRSDIADGLRGSLRNRG 482
Query: 238 IKKPPGCILIEVDGVVHEFV------------------------KAGFVPNKSEVL--FD 271
I+K PG I V+ VH F AG+VP+ S ++ +
Sbjct: 483 IRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEVYLKLNEVIERIRSAGYVPDISGLVSPSE 542
Query: 272 MDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETV 331
D EEKE AL H+EKLA+ FGL+ P + + KNLR+C DCH+A I+SKVY+RE +
Sbjct: 543 GDLEEKEQALCCHSEKLAVCFGLLETKPRTPLLVFKNLRICRDCHSAMKIVSKVYDREII 602
Query: 332 VMDRNRFHHFKNGSCSCKDFW 352
+ DRNRFH FK GSCSC D+W
Sbjct: 603 IRDRNRFHQFKGGSCSCSDYW 623
>gi|125539857|gb|EAY86252.1| hypothetical protein OsI_07623 [Oryza sativa Indica Group]
Length = 629
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/373 (38%), Positives = 213/373 (57%), Gaps = 51/373 (13%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYI-------MKKNIEVDV 61
EAL +F + + D V +VS+L AC HLGA+E G W+H Y+ + N+ ++
Sbjct: 194 EALWVFDRMMREEFRPDVVVLVSVLKACAHLGAVERGRWVHRYLETGSFGGRRGNLMLET 253
Query: 62 GL------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKP 103
L G+ +DV+ A+I LAM G G +ALE F M +G P
Sbjct: 254 ALVDMYCKCGCMEDAWQVFDGVHRRDVVLWNAMIGGLAMNGYGERALELFRRMLQKGFMP 313
Query: 104 DAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEEL 163
+ TF+ VL AC+H G VDE F M + YGI+P EHYGCL +LGRAG + +AE L
Sbjct: 314 NESTFIAVLCACTHTGRVDEGKRVFKSMQD-YGIKPQREHYGCLADLLGRAGNVEEAEAL 372
Query: 164 IKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKW 223
+ +MPM G L+ +C++H+++ ER ++L+EL P +GG YV+L N Y+ + +W
Sbjct: 373 LLDMPMEPHASQWGALMSSCQMHNDINVGERVGKRLIELEPYDGGRYVVLFNLYAVNGRW 432
Query: 224 KKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------ 259
++ + IR++M +R KK G IE++G+VHEF+
Sbjct: 433 EEARTIRQMMEDRGAKKETGLSFIELNGLVHEFISGDTRHPLTRKIYALLEDIERRLQLI 492
Query: 260 GFVPNKSEVLFDM-DEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTA 318
G+V + S+V+ DM DEE+K AL+ H+E+LA+ FG+++ GV IRI+KNLRVC DCH
Sbjct: 493 GYVKDTSQVIMDMDDEEDKGIALSYHSERLALAFGILNIPQGVPIRIVKNLRVCRDCHVH 552
Query: 319 TNIISKVYNRETV 331
+ ++SK+Y RE +
Sbjct: 553 SKLVSKLYEREII 565
>gi|15231831|ref|NP_188050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546762|sp|Q9LUL5.2|PP229_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14330
gi|332641981|gb|AEE75502.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/391 (36%), Positives = 208/391 (53%), Gaps = 47/391 (12%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGL----- 63
E LFR++Q + + T+ ++L AC+ + AL G +H I+K + DV L
Sbjct: 320 EMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLM 379
Query: 64 -----------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
M KD+ + ++ A+ G + + F M GV PD I
Sbjct: 380 DMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGI 439
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
TFV +L CS GL + +S F M ++ + P++EHY CLV ILGRAG+I +A ++I+
Sbjct: 440 TFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIET 499
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP + G LL +CR+H N+ E AA++L L P N G+YV++SN Y+ ++ W V
Sbjct: 500 MPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNV 559
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEFV-------------------------KAGF 261
+IRE+M +R +KK GC ++V + FV K+G+
Sbjct: 560 DKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGY 619
Query: 262 VPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNI 321
PN S VL D+DEE K + H+E+LA T+ L+ GV IRI KNLRVC DCH+ I
Sbjct: 620 SPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKI 679
Query: 322 ISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+S+V R V+ D RFHHF +G CSCKD+W
Sbjct: 680 VSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 101/238 (42%), Gaps = 29/238 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + + +AL+++ ++ + ++ L AC L L VG +H I+K+ +VD
Sbjct: 211 YSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVD 270
Query: 61 ----------------------VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V GM+ ++V+T +LI VL+ + ++ F +MQ
Sbjct: 271 QVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQE 330
Query: 99 RGVKPDAITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+ T +L ACS A L+ + H ++ K +P + L+ + G+ G +
Sbjct: 331 EMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKE--KPDVPLLNSLMDMYGKCGEV 388
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLE--LLPDNGGSYVIL 213
+ + M + D +L I+ N+E + ++E + PD G ++V L
Sbjct: 389 EYSRRVFDVM-LTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPD-GITFVAL 444
>gi|115468046|ref|NP_001057622.1| Os06g0472300 [Oryza sativa Japonica Group]
gi|113595662|dbj|BAF19536.1| Os06g0472300, partial [Oryza sativa Japonica Group]
Length = 397
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 214/387 (55%), Gaps = 44/387 (11%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEV---------- 59
A+ LF ++ G ++ T+ S+L ACT L LEVG +H +++K + ++
Sbjct: 11 AIELFMRMKEAGFLSNQGTLTSVLRACTGLVTLEVGRQVHAHVLKYDKDLILHNALLDMY 70
Query: 60 ---------DVGLG-MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFV 109
D G M +DV++ + +I LA G+ +AL+ F M+ G +P+ IT V
Sbjct: 71 CKCGSLQDADALFGRMPQRDVISWSTMISGLAQNGRSIEALKVFDMMKSEGPRPNHITMV 130
Query: 110 GVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPM 169
GVL ACSHAGLV++ +F+ M + +GI+P EH C+V +LGRAG++ A + I M
Sbjct: 131 GVLFACSHAGLVEDGWYYFSSMEKLFGIQPEREHCNCMVDLLGRAGKLDDAVKFIHEMNF 190
Query: 170 ALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRI 229
D + LLGACR+H N + A AA+++L L PD+ G+ ++LSN Y+ R+W ++
Sbjct: 191 QPDSVIWRTLLGACRMHKNADLAAYAAKEILRLEPDDQGARILLSNTYADLRQWADAEKS 250
Query: 230 RELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------GFVPNK 265
++M +R +KK PG IE+ VH F+ G+ P
Sbjct: 251 WKMMRDRGVKKDPGRSWIELGKQVHVFIAGDLSHPCSESIIQELSRLFSRVTNLGYTPQT 310
Query: 266 SEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKV 325
VL D+ E+KE L H+EKLAI FG ++ M G IRI+KNLR+C DCH ++SK
Sbjct: 311 EFVLQDLATEQKEDLLKYHSEKLAIAFGTMNAMEGKPIRIMKNLRICGDCHAFAKLVSKS 370
Query: 326 YNRETVVMDRNRFHHFKNGSCSCKDFW 352
+ ++ D RFHHF++G CSC D+W
Sbjct: 371 EGKVIIIRDPVRFHHFQDGVCSCNDYW 397
>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 213/399 (53%), Gaps = 47/399 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGA-LEVGMWLHPYIMKKNIEV 59
Y + E A+ +F ++ + + ++ T ++ AC A +E G LH + +K
Sbjct: 82 YAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNN 141
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
+ + AL +D+++ ++I A G G KALE F EMQ
Sbjct: 142 ALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQ 201
Query: 98 IRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
+ ++ D +TF+GV+ AC+H GL +E +F++M + + I P +EHY C+V + GRAG +
Sbjct: 202 RQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRAGML 261
Query: 158 AKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRY 217
KA E+I MP V LL A IH NLE + AA +L+ L P N SYV+L+N Y
Sbjct: 262 VKAMEIINEMPFPASANVWRTLLAASCIHRNLEVGKLAADKLISLQPQNPASYVLLTNMY 321
Query: 218 SSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK------------------- 258
+S WK+ ++R+LM E+ +KK G IEV + F+
Sbjct: 322 ASVGNWKERAKVRKLMEEKKVKKVAGYSWIEVKNKTYTFLAGDVSHPLSNQIYAKLEELS 381
Query: 259 -----AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCN 313
AG+ P+ S V D+DEE KE L+ H+E+LAI FGL+ PG ++I+KNLRVC
Sbjct: 382 CQLKGAGYQPDTSYVFQDVDEEHKEAILSQHSERLAIAFGLIGTPPGTPLQIVKNLRVCG 441
Query: 314 DCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
DCH+ +IS + R+ VV D NRFHHFK G CSC D+W
Sbjct: 442 DCHSVIKLISILEGRDIVVRDSNRFHHFKGGLCSCGDYW 480
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/274 (46%), Positives = 179/274 (65%), Gaps = 22/274 (8%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+E+L +FR++Q G+ D VT+V++L +C +LG LE+G W+H Y+ + I D +G AL
Sbjct: 288 KESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNAL 347
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
KDV + TA+IV LAM GQG KAL+ F EM G++PD
Sbjct: 348 VDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDE 407
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TFVGVL ACSH GLV+E +F MS Y +RP +EHYGC+V +LGRAG I +AEE I+
Sbjct: 408 VTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIR 467
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
NMP+ D FVLG LLGAC+IH +E E +++ ++ P G+YV++SN YSS+ +W+
Sbjct: 468 NMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRD 527
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA 259
++R+ M ERN++K PGC IE+DGV+HEF K
Sbjct: 528 ALKLRKTMKERNLEKTPGCSSIELDGVIHEFQKG 561
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 23/130 (17%)
Query: 15 REVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL------- 67
R+V D V+ +++ +G G+ L+ I N+ +DV +G AL
Sbjct: 195 RKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLY-IIRNSNVNLDVFVGNALVDMYLKC 253
Query: 68 ---------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVL 112
K+V++ ++I LA GQ ++L F +MQ GVKPD +T V VL
Sbjct: 254 GDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVL 313
Query: 113 VACSHAGLVD 122
+C++ G+++
Sbjct: 314 NSCANLGVLE 323
>gi|125540774|gb|EAY87169.1| hypothetical protein OsI_08570 [Oryza sativa Indica Group]
Length = 613
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 205/398 (51%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E + F + G D+ +MVS L AC HLGA +VG +H +++ ++
Sbjct: 216 YTRAGRWAECVESFGAMVRAGWRPDESSMVSALSACAHLGAHDVGRSIHCALLRNTARLN 275
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ +L K+ T +A++ LA+ G G KALE F M
Sbjct: 276 TFMSTSLVDMYAKCGCIENAAAVFDAMDDKNAWTYSAMVSGLALHGDGRKALEVFDAMVR 335
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
G +PDA +VGVL ACS AGL++E + F+ M ++ + P+ +HYGC+V ++ RAGR+
Sbjct: 336 EGHRPDAAVYVGVLNACSRAGLLEEGLRCFDRMRLEHKLTPNAQHYGCMVDLMARAGRLD 395
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
A LI NMP LL ACRIH NLE AERA Q+L L N G Y+ILS+ ++
Sbjct: 396 DARALIGNMPTGPTDTAWRSLLNACRIHGNLELAERALQELERLGATNAGDYIILSDMHA 455
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------- 259
+ R +R + + PG +EV G H FV
Sbjct: 456 RAHNRDAAAARRTEAVDRGLAQAPGYSAVEVHGATHRFVSQDRSHPRADDIYEMLHQMEW 515
Query: 260 -----GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
G+ P+ SE+ D EEEK + H++KLA+ FGL+S G +R++ NLR+ +
Sbjct: 516 QLRFEGYTPDTSELALDAGEEEKRRVVAAHSQKLAMAFGLLSTPEGAPVRVVTNLRMSKE 575
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH + +IS+++ RE VV DRNRFH FK G+CSC ++W
Sbjct: 576 CHAYSALISEIFGREIVVRDRNRFHRFKRGACSCGNYW 613
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 54/137 (39%), Gaps = 24/137 (17%)
Query: 10 ALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-- 67
AL LF ++ G+ D T + AC LGAL+ G L +++K + D +L
Sbjct: 122 ALRLFVDMVDDGVEPDSYTFPFVFKACAQLGALQEGRQLQGHLVKLGFQRDEHSQNSLIS 181
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
+ + +AL+ G+ + +E F M G +PD
Sbjct: 182 FYGKCGEADLARRAFEQMEDDEQTTASWSALLAAYTRAGRWAECVESFGAMVRAGWRPDE 241
Query: 106 ITFVGVLVACSHAGLVD 122
+ V L AC+H G D
Sbjct: 242 SSMVSALSACAHLGAHD 258
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/274 (46%), Positives = 179/274 (65%), Gaps = 22/274 (8%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+E+L +FR++Q G+ D VT+V++L +C +LG LE+G W+H Y+ + I D +G AL
Sbjct: 310 KESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNAL 369
Query: 68 ----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
KDV + TA+IV LAM GQG KAL+ F EM G++PD
Sbjct: 370 VDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDE 429
Query: 106 ITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIK 165
+TFVGVL ACSH GLV+E +F MS Y +RP +EHYGC+V +LGRAG I +AEE I+
Sbjct: 430 VTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIR 489
Query: 166 NMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKK 225
NMP+ D FVLG LLGAC+IH +E E +++ ++ P G+YV++SN YSS+ +W+
Sbjct: 490 NMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRD 549
Query: 226 VKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA 259
++R+ M ERN++K PGC IE+DGV+HEF K
Sbjct: 550 ALKLRKTMKERNLEKTPGCSSIELDGVIHEFQKG 583
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 23/145 (15%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK-KNIEV 59
YV+ E + LF E+ + L D +T+V +L +C LG L +G LH YI++ N+ +
Sbjct: 201 YVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNL 260
Query: 60 DVGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQ 97
DV +G AL K+V++ ++I LA GQ ++L F +MQ
Sbjct: 261 DVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQ 320
Query: 98 IRGVKPDAITFVGVLVACSHAGLVD 122
GVKPD +T V VL +C++ G+++
Sbjct: 321 RLGVKPDDVTLVAVLNSCANLGVLE 345
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 22/133 (16%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
E L++++++ KG+ D T+ +L AC A+ G +H +K + DV + L
Sbjct: 108 EGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLM 167
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+D+++ T +I G + + F+EM ++ D +
Sbjct: 168 RMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGM 227
Query: 107 TFVGVLVACSHAG 119
T V VL +C+ G
Sbjct: 228 TLVIVLSSCARLG 240
>gi|77554579|gb|ABA97375.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 794
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/375 (37%), Positives = 211/375 (56%), Gaps = 53/375 (14%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKD--------------- 69
++VT+V+ L AC +G L+ GM++H + + ++ +V + +L D
Sbjct: 217 NEVTIVAALSACAQIGLLKDGMYVHEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVF 276
Query: 70 ---------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+++ A I +M G G AL F EM R ++PD +T++ VL C+H+GL
Sbjct: 277 HSIKPEDQTLVSYNAAIQAHSMHGHGGDALRLFDEMPTR-IEPDGVTYLAVLCGCNHSGL 335
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLL 180
VD+ + FN M + P+++HYG +V +LGRAGR+ +A + + +MP D + LL
Sbjct: 336 VDDGLRVFNSMR----VAPNMKHYGTIVDLLGRAGRLTEAYDTVISMPFPADIVLWQTLL 391
Query: 181 GACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKK 240
GA ++H +E AE AA +L EL + G YV+LSN Y+S +W V R+R+ M +++K
Sbjct: 392 GAAKMHGVVELAELAANKLAELGSNVDGDYVLLSNVYASKARWMDVGRVRDTMRSNDVRK 451
Query: 241 PPGCILIEVDGVVHEFVKA------------------------GFVPNKSEVLFDMDEEE 276
PG E+DGV+H+F+ G+ P S VL D+ EEE
Sbjct: 452 VPGFSYTEIDGVMHKFINGDKEHPRWQEIYRALEDIVSRISELGYEPETSNVLHDIGEEE 511
Query: 277 KETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRN 336
K+ AL H+EKLAI FGL++ PG +R+IKNLR+C DCH +ISK Y R V+ DR
Sbjct: 512 KQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLISKAYGRVIVIRDRA 571
Query: 337 RFHHFKNGSCSCKDF 351
RFH F++G CSC+D+
Sbjct: 572 RFHRFEDGQCSCRDY 586
>gi|147809935|emb|CAN67095.1| hypothetical protein VITISV_016806 [Vitis vinifera]
Length = 348
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/336 (41%), Positives = 197/336 (58%), Gaps = 32/336 (9%)
Query: 48 LHPYIMKKNIEVDVGLGMALKDVMTLTALIVVLA---MCGQGNKALEYFYEMQIRGVKPD 104
+HPY+M+ + V L A++ +M L+ + G+G + + + Y + +
Sbjct: 14 VHPYVMRLVGMLRV-LTKAVRKLMAERNLVTWNSGNGFAGRGARWVHHGYRLLLNACAEL 72
Query: 105 AITFVG----VLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKA 160
+G ++ S LVDE +F M E+YGI P IEHYGC+V +LGRAG + +A
Sbjct: 73 GALALGRGKGLMCTLSLWDLVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQA 132
Query: 161 EELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSS 220
E I+NMPM + V LLGAC IH +L E A QLL+L P + G YV+LSN Y+S
Sbjct: 133 HEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASE 192
Query: 221 RKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA--------------------- 259
++W V ++R M +KK PG L+E+ +HEFV
Sbjct: 193 QRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLL 252
Query: 260 ---GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCH 316
G+VP+ S VL D++EEEKETAL+ H+EK+AI F L++ G+ IR++KNLRVC DCH
Sbjct: 253 KLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCH 312
Query: 317 TATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
A +ISKV++RE VV DR+RFHHFK+G CSCKD+W
Sbjct: 313 LAIKLISKVFDREIVVRDRSRFHHFKDGHCSCKDYW 348
>gi|326524233|dbj|BAK00500.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 688
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/373 (38%), Positives = 203/373 (54%), Gaps = 38/373 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ EEA FR + +G+ D+ T+ S + AC + G +E G D
Sbjct: 330 YVQNGREEEAFEFFRLMLCEGVAADQFTLTSAVAACANAGMVEQGRMF-----------D 378
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+ K+V T+++ A G+G A++ F M +KP+ +T VGVL ACSH L
Sbjct: 379 IA---PTKNVALWTSMLCSYASHGKGRMAIKLFNRMTAEKIKPNEVTLVGVLSACSHGRL 435
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLL 180
V E F LM E+YGI PSIEHY C+V + GRAG + KA I + + V LL
Sbjct: 436 VSEGEHFFKLMQEEYGIVPSIEHYNCMVDLYGRAGLLDKANIFINENKIKHESIVWKTLL 495
Query: 181 GACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKK 240
ACR+H ++E A+ A++ L++L + GSYV+LSN Y++ KW+ ++R LM ER ++K
Sbjct: 496 SACRVHKDMEHAKLASESLIQLEQCDAGSYVMLSNMYATHSKWRDTSKLRSLMLERGVRK 555
Query: 241 PPGCILIEVDGVVHEFVKAGFV-PNKSE-----------------------VLFDMDEEE 276
PG I + VH FV P SE V D++EE+
Sbjct: 556 QPGRSWIHLKNTVHTFVAGDAAHPRSSEIYTYLEKLMERLKELGYTSRIDLVAHDVEEEQ 615
Query: 277 KETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRN 336
+ETAL H+EKLA+ FG++S G +RI KNLR+C DCH A +S+ +RE VV D
Sbjct: 616 RETALKFHSEKLAMAFGIISTPSGTPLRIFKNLRICVDCHEAIKYVSRATDREIVVRDLY 675
Query: 337 RFHHFKNGSCSCK 349
RFHHFK+ CSC+
Sbjct: 676 RFHHFKDAKCSCE 688
>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 224/398 (56%), Gaps = 47/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EEAL LFR + ++G+ ++VT +LL A + L +++ G +H I+++ +
Sbjct: 192 YTQLGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFF 251
Query: 61 VGLGMALKD----------------------VMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ L +L D V++ A+++ G ++ ++ F M
Sbjct: 252 MALQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSM-C 310
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
VKPD++T + VL SH GLVDE + F+ + ++ + EHYGC++ +LGR+G++
Sbjct: 311 DEVKPDSVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQ 370
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
KA LI+ MP + G LLGACR+H N+ E AQ+LL++ P+N G+YVILSN Y+
Sbjct: 371 KALNLIEKMPFQPTRAIWGSLLGACRVHTNVHVGEFVAQKLLDIEPENAGNYVILSNIYA 430
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEF---------------------- 256
++ WK V R+R+LM ++ + K PG + +D V+H F
Sbjct: 431 AAGMWKDVFRVRKLMLKKTVIKEPGRSWMILDKVIHTFHSCERFHPRKEDINAKIKEIYV 490
Query: 257 --VKAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
AGFVP+ S VL D+D+E+KE L H+EKLAITFGL+S + I+++KNLR+C D
Sbjct: 491 AIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVD 550
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CH +SKVY RE + D+NRFH G+C+C D+W
Sbjct: 551 CHNFAKFVSKVYGREISLRDKNRFHLITEGACTCGDYW 588
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/384 (36%), Positives = 218/384 (56%), Gaps = 47/384 (12%)
Query: 16 EVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL-------- 67
+++ + D T + L C L A +G +H +++ E ++ +G AL
Sbjct: 499 QMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCG 558
Query: 68 --------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLV 113
+DV+T T +I M G+G KALE F +M+ G+ PD++ F+ ++
Sbjct: 559 CLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIY 618
Query: 114 ACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDH 173
ACSH+GLV++ ++ F M Y I P IEHY C+V +L R+ +I+KAEE I+ MP+ D
Sbjct: 619 ACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDA 678
Query: 174 FVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELM 233
+ +L ACR ++E AER +++++EL PD+ G ++ SN Y++ RKW KV IR+ +
Sbjct: 679 SIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSV 738
Query: 234 AERNIKKPPGCILIEVDGVVHEF------------------------VKAGFVPNKSEVL 269
+++IKK PG IE+ VH F K G++P+ EV
Sbjct: 739 RDKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQSEAIHKSLEILYSLMAKEGYIPDSREVS 798
Query: 270 FDM-DEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNR 328
++ +EEEK + H+E+LAI FGL++ PG ++++KNLRVC+DCH T +ISK+ R
Sbjct: 799 QNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCSDCHEVTKLISKIVGR 858
Query: 329 ETVVMDRNRFHHFKNGSCSCKDFW 352
E +V D NRFH FK+G CSCKD W
Sbjct: 859 EILVRDANRFHLFKDGICSCKDRW 882
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 13/122 (10%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
E+AL F +++ G+ D V ++L+ AC+H G +E G+ MK + ++D
Sbjct: 592 EKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEK-MKTHYKID------- 643
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVD--ERI 125
+ ++ +L+ + +KA E+ M I +PDA + VL AC +G ++ ER+
Sbjct: 644 PMIEHYACVVDLLSRSQKISKAEEFIQAMPI---EPDASIWASVLRACRTSGDMETAERV 700
Query: 126 SH 127
S
Sbjct: 701 SR 702
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 22/137 (16%)
Query: 9 EALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL- 67
+AL + +++ ++ DK T S++ AC L E+G ++ I++ E D+ +G AL
Sbjct: 89 KALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLYVGNALV 148
Query: 68 ---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAI 106
+D+++ +LI + G +ALE ++E++ + PD+
Sbjct: 149 DMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSF 208
Query: 107 TFVGVLVACSHAGLVDE 123
T VL A ++ +V +
Sbjct: 209 TVSSVLPAFANLLVVKQ 225
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 10/144 (6%)
Query: 68 KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERISH 127
K+V ++I + G KALE++ +++ V PD TF V+ AC AGL D +
Sbjct: 69 KNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDAEMG- 125
Query: 128 FNLMSEK---YGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACR 184
+L+ ++ G + LV + R G +++A ++ MP+ D L+
Sbjct: 126 -DLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVR-DLVSWNSLISGYS 183
Query: 185 IHDNLEAAERAAQQLLE--LLPDN 206
H E A +L ++PD+
Sbjct: 184 SHGYYEEALEIYHELRNSWIVPDS 207
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 13/119 (10%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y++ EA+ LF+ + D +T + L+ T L L+ G LH +K I +D
Sbjct: 383 YIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYID 442
Query: 61 VGLGMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAG 119
+ + ALI + A CG+ +L+ F M D +T+ V+ AC G
Sbjct: 443 LSVS---------NALIDMYAKCGEVGDSLKIFNSMGTL----DTVTWNTVISACVRFG 488
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 23/132 (17%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIE----VDVGL 63
EEAL ++ E+++ + D T+ S+L A +L ++ G LH + +K + V+ GL
Sbjct: 189 EEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGL 248
Query: 64 ------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
M ++D +T +I ++++ F E + KPD
Sbjct: 249 LAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLE-NLDQFKPDI 307
Query: 106 ITFVGVLVACSH 117
+T VL AC H
Sbjct: 308 LTVTSVLCACGH 319
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 33/240 (13%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMK------ 54
Y++ EE++ +F E + D +T+ S+L AC HL L + +++ Y+++
Sbjct: 283 YLKLEMVEESVKMFLENLDQ-FKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLE 341
Query: 55 ---KNIEVDVGL-------------GMALKDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
KNI +DV M KD ++ ++I G +A++ F M I
Sbjct: 342 STVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMI 401
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERIS---HFNLMSEKYGIRPSIEHYGCLVYILGRAG 155
+ D IT++ +L++ S L D + H N + K GI + L+ + + G
Sbjct: 402 MEEQADHITYL-MLISLS-TRLADLKFGKGLHSNGI--KSGIYIDLSVSNALIDMYAKCG 457
Query: 156 RIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLL--ELLPDNGGSYVIL 213
+ + ++ +M LD ++ AC + + Q+ +++PD V L
Sbjct: 458 EVGDSLKIFNSMG-TLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTL 516
>gi|297745917|emb|CBI15973.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/371 (41%), Positives = 206/371 (55%), Gaps = 57/371 (15%)
Query: 8 EEALLLFREVQ-HKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMA 66
+EAL LF E+Q K D+VT+ + HL + M+ ++K + V +
Sbjct: 313 KEALELFHELQLSKTAKPDEVTLKQGMKLNCHLTTSLIDMYCKCGDLQKALMV--FHSVE 370
Query: 67 LKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDERIS 126
KDV +A+I LAM G G A+ F +MQ VKP+A+TF +L ACSH GLV+E +
Sbjct: 371 RKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRT 430
Query: 127 HFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLLGACRIH 186
FN M YG MPMA V G LLGAC IH
Sbjct: 431 FFNQMELVYG-----------------------------KMPMAPAASVWGALLGACTIH 461
Query: 187 DNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKKPPGCIL 246
+N+ AE+A QL+EL P N G+YV+LSN Y+ + KW +V +R+LM + +KK PGC
Sbjct: 462 ENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSS 521
Query: 247 IEVDGVVHEFV------------------------KAGFVPNKSEVLFDMDEEE-KETAL 281
IEVDG+VHEF+ G+VPNKS +L ++EE+ KE AL
Sbjct: 522 IEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQAL 581
Query: 282 NLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRNRFHHF 341
LH+EKLAI FGL+S IRI+KNLRVC DCH+ ++SK+Y+RE ++ DR RFHHF
Sbjct: 582 FLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHF 641
Query: 342 KNGSCSCKDFW 352
+ G CSC D+W
Sbjct: 642 REGHCSCMDYW 652
>gi|222630733|gb|EEE62865.1| hypothetical protein OsJ_17668 [Oryza sativa Japonica Group]
Length = 620
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/375 (37%), Positives = 211/375 (56%), Gaps = 53/375 (14%)
Query: 25 DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMALKD--------------- 69
++VT+V+ L AC +G L+ GM++H + + ++ +V + +L D
Sbjct: 46 NEVTIVAALSACAQIGLLKDGMYVHEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVF 105
Query: 70 ---------VMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGL 120
+++ A I +M G G AL F EM R ++PD +T++ VL C+H+GL
Sbjct: 106 HSIKPEDQTLVSYNAAIQAHSMHGHGGDALRLFDEMPTR-IEPDGVTYLAVLCGCNHSGL 164
Query: 121 VDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMALDHFVLGGLL 180
VD+ + FN M + P+++HYG +V +LGRAGR+ +A + + +MP D + LL
Sbjct: 165 VDDGLRVFNSMR----VAPNMKHYGTIVDLLGRAGRLTEAYDTVISMPFPADIVLWQTLL 220
Query: 181 GACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKVKRIRELMAERNIKK 240
GA ++H +E AE AA +L EL + G YV+LSN Y+S +W V R+R+ M +++K
Sbjct: 221 GAAKMHGVVELAELAANKLAELGSNVDGDYVLLSNVYASKARWMDVGRVRDTMRSNDVRK 280
Query: 241 PPGCILIEVDGVVHEFVKA------------------------GFVPNKSEVLFDMDEEE 276
PG E+DGV+H+F+ G+ P S VL D+ EEE
Sbjct: 281 VPGFSYTEIDGVMHKFINGDKEHPRWQEIYRALEDIVSRISELGYEPETSNVLHDIGEEE 340
Query: 277 KETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNIISKVYNRETVVMDRN 336
K+ AL H+EKLAI FGL++ PG +R+IKNLR+C DCH +ISK Y R V+ DR
Sbjct: 341 KQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLISKAYGRVIVIRDRA 400
Query: 337 RFHHFKNGSCSCKDF 351
RFH F++G CSC+D+
Sbjct: 401 RFHRFEDGQCSCRDY 415
>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
Length = 610
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 223/390 (57%), Gaps = 45/390 (11%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
EEAL LFR++ ++G+ ++VT LL A + L +++ G +H I+++ + + L +L
Sbjct: 221 EEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSL 280
Query: 68 KDV----------------MTLTALIVVLAMC-GQGNKALEY----FYEMQIRGVKPDAI 106
D+ M +++ AM G G + Y + VKPD++
Sbjct: 281 IDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMCDKVKPDSV 340
Query: 107 TFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKN 166
T + VL+ SH GLVDE + F+ + ++ + +HYGC++ +LGR+G++ KA LI+
Sbjct: 341 TLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALLLIQK 400
Query: 167 MPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWKKV 226
MP + G LLGACR+H N+ E AQ+L ++ P+N G+YVILSN Y+++R WK V
Sbjct: 401 MPFQPTRAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAAARMWKDV 460
Query: 227 KRIRELMAERNIKKPPGCILIEVDGVVHEF--------------VK----------AGFV 262
R+R+LM ++ + K PG + +D V+H F VK AGFV
Sbjct: 461 FRLRKLMLKKTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDINVKINEIYAAIKAAGFV 520
Query: 263 PNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATNII 322
P+ S VL D+D+E+KE L H+EKLAITFGL+S + I+++KNLR+C DCH +
Sbjct: 521 PDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFV 580
Query: 323 SKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
SKVY RE + D+NRFH G+C+C D+W
Sbjct: 581 SKVYGREISLRDKNRFHLITEGACTCGDYW 610
>gi|302804779|ref|XP_002984141.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
gi|300147990|gb|EFJ14651.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
Length = 487
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 210/402 (52%), Gaps = 51/402 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTG---DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI 57
Y + EAL LFRE+ GL G D+ LL AC L A G H I +
Sbjct: 87 YSREDLYREALQLFREMTLHGLDGTKPDRSYFAFLLQACATLSAAAEGRLAHRRIQECGY 146
Query: 58 EVDVGL-----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFY 94
+ G+ GM+ +D + T +I A G ++L F+
Sbjct: 147 DSSDGVLGLGIINMYGKCGNLRAAHEVFDGMSERDTVAWTTIISGYAHHGHSEESLLMFW 206
Query: 95 EMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRA 154
MQ G KPD ++ + VL CSHAGLV++ F +++++G+ P +HYGC++ +LGR+
Sbjct: 207 RMQQDGSKPDGVSLLCVLSVCSHAGLVEQGWDFFLDITKEFGVEPGEKHYGCMIDLLGRS 266
Query: 155 GRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILS 214
G + AE +I+ MP L AC++H + E +RAA+++LEL P +YV LS
Sbjct: 267 GDLEAAEVMIRRMPFQATAMNWAIFLAACKVHSDTERGKRAAEKVLELEPVPA-AYVSLS 325
Query: 215 NRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK---------------- 258
N Y+++ +W +V R+R M ++K PG IEV+ VHEF
Sbjct: 326 NIYAAAGEWDQVDRVRSAMKAMGLQKDPGRSSIEVNSRVHEFWAGDKSHPRAAEIYGLLE 385
Query: 259 --------AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLR 310
+G+VP+ VL ++ EE+KE L H+EKLAI FGL+S G +RIIKNLR
Sbjct: 386 SLTRQMEGSGYVPDTKLVLLNVSEEQKERLLCFHSEKLAIAFGLLSTPAGSSLRIIKNLR 445
Query: 311 VCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
VC DCHTA +S++ RE + D RFHHF++G CSC D+W
Sbjct: 446 VCGDCHTAAKFVSRIAGREIFMRDSQRFHHFQDGHCSCGDYW 487
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 28/178 (15%)
Query: 17 VQHKGLTGDKVTMVSLLLACT-HLGALEVGMWLHPYIMKKNIEVDVGLGMAL-------- 67
+Q +G+ DK+ V+ L AC L L +G +H +++ +E + + AL
Sbjct: 1 MQQEGVLPDKICFVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAG 60
Query: 68 --------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV---KPDAITFVG 110
KD+++ TAL+ + +AL+ F EM + G+ KPD F
Sbjct: 61 CLDEATRVFRGLGRKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAF 120
Query: 111 VLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+L AC+ E R++H + Y + G ++ + G+ G + A E+ M
Sbjct: 121 LLQACATLSAAAEGRLAHRRIQECGYDSSDGVLGLG-IINMYGKCGNLRAAHEVFDGM 177
>gi|302780908|ref|XP_002972228.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
gi|300159695|gb|EFJ26314.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
Length = 487
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 210/402 (52%), Gaps = 51/402 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTG---DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNI 57
Y + EAL LFRE+ GL G D+ LL AC L A G H I +
Sbjct: 87 YSREDLYREALQLFREMTLHGLDGTKPDRSYFAFLLQACATLSAAAEGRLAHRRIQECGY 146
Query: 58 EVDVGL-----------------------GMALKDVMTLTALIVVLAMCGQGNKALEYFY 94
+ G+ GM+ +D + T +I A G ++L F+
Sbjct: 147 DSSDGVLGLGIINMYGKCGNLRAAHEVFDGMSERDTVAWTTIISGYAHHGHSEESLLMFW 206
Query: 95 EMQIRGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRA 154
MQ G KPD ++ + VL CSHAGLV++ F +++++G+ P +HYGC++ +LGR+
Sbjct: 207 RMQQDGSKPDGVSLLCVLSVCSHAGLVEQGWDFFLDITKEFGVEPGEKHYGCMIDLLGRS 266
Query: 155 GRIAKAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILS 214
G + AE +I+ MP L AC++H + E +RAA+++LEL P +YV LS
Sbjct: 267 GDLEAAEVMIRRMPFQATAMNWAIFLAACKVHSDTERGKRAAEKVLELEPVPA-AYVSLS 325
Query: 215 NRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFVK---------------- 258
N Y+++ +W +V R+R M ++K PG IEV+ VHEF
Sbjct: 326 NIYAAAGEWDQVDRVRSAMKAMGLQKDPGRSSIEVNSRVHEFWAGDKSHPRAAEIYGLLE 385
Query: 259 --------AGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLR 310
+G+VP+ VL ++ EE+KE L H+EKLAI FGL+S G +RIIKNLR
Sbjct: 386 SLTRQMEGSGYVPDTKLVLLNVSEEQKERLLCFHSEKLAIAFGLLSTPAGSSLRIIKNLR 445
Query: 311 VCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
VC DCHTA +S++ RE + D RFHHF++G CSC D+W
Sbjct: 446 VCGDCHTAAKFVSRIAGREIFMRDSQRFHHFQDGHCSCGDYW 487
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 28/178 (15%)
Query: 17 VQHKGLTGDKVTMVSLLLACT-HLGALEVGMWLHPYIMKKNIEVDVGLGMAL-------- 67
+Q +G+ DK+ V+ L AC L L +G +H +++ +E + + AL
Sbjct: 1 MQQEGVLPDKICFVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAG 60
Query: 68 --------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGV---KPDAITFVG 110
KD+++ TAL+ + +AL+ F EM + G+ KPD F
Sbjct: 61 CLDEATRVFRGLERKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAF 120
Query: 111 VLVACSHAGLVDE-RISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
+L AC+ E R++H + Y + G ++ + G+ G + A E+ M
Sbjct: 121 LLQACATLSAAAEGRLAHRRIQECGYDSSDGVLGLG-IINMYGKCGNLRAAHEVFDGM 177
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 146/392 (37%), Positives = 206/392 (52%), Gaps = 48/392 (12%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL 67
+ AL FR + G+ +++T V++L AC AL G+ +H ++ +E +V + AL
Sbjct: 513 KRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATAL 572
Query: 68 -----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPD 104
+DV+ A+I + G +AL+ F+ MQ G +PD
Sbjct: 573 ASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPD 632
Query: 105 AITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
+FV VL ACSH GL DE F M + YGI PS +HY C V +LGRAG +A AEELI
Sbjct: 633 EQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELI 692
Query: 165 KNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYSSSRKWK 224
+ M + V LLGACR + +++ A + EL P + +YV+LSN + + KW
Sbjct: 693 RCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWD 752
Query: 225 KVKRIRELMAERNIKKPPGCILIEVDGVVHEFVKA------------------------G 260
+ +R M R ++K G IE+ VHEFV G
Sbjct: 753 EAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIG 812
Query: 261 FVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCNDCHTATN 320
+VP+ VL +DE EKE L H+E+LAI G++S +R++KNLRVC DCH AT
Sbjct: 813 YVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSSTDT-VRVMKNLRVCEDCHNATK 871
Query: 321 IISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
ISK+ N+E VV D +RFHHF +GSCSC D+W
Sbjct: 872 FISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 27/243 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y E + A+ +F +Q +G+ D VT +++L AC LG L G +H +I++ +E
Sbjct: 103 YTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGK 162
Query: 61 VGLGMAL---------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIR 99
L L +D+++ A I A G + ALE F MQ+
Sbjct: 163 SVLANLLLHIYGSCGCVASAMLLFERMERDLVSWNAAIAANAQSGDLDMALELFQRMQLE 222
Query: 100 GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAK 159
GV+P IT V L C A + R H + + G+ ++ L R G + +
Sbjct: 223 GVRPARITLVITLSVC--AKIRQARAIHS--IVRESGLEQTLVVSTALASAYARLGHLDQ 278
Query: 160 AEELIKNMPMALDHFVLGGLLGACRIHDNL-EAAERAAQQLLELLPDNGGSYVILSNRYS 218
A+E+ + D +LGA H ++ EAA A+ L E +P + + V S S
Sbjct: 279 AKEVF-DRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCS 337
Query: 219 SSR 221
S R
Sbjct: 338 SLR 340
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 32/205 (15%)
Query: 8 EEALLLFREVQHKGLTGDKVTMVSLLLACT----HLGALEVGMWLHPYIMKKNIEVDVGL 63
+ AL LF+ +Q +G+ + T ++LL A A+ G LH I+ + +
Sbjct: 405 KRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAI 464
Query: 64 GMAL-------------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
G A+ DV++ A+I L+ G G +AL +F M +
Sbjct: 465 GTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDL 524
Query: 99 RGVKPDAITFVGVLVACSHAGLVDER-ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
GV P+ IT V VL AC+ A + E I H +L G+ ++ L + GR G +
Sbjct: 525 HGVAPNQITCVAVLDACAGAAALTEGVIVHDHL--RHSGMESNVFVATALASMYGRCGSL 582
Query: 158 AKAEELIKNMPMALDHFVLGGLLGA 182
A E+ + + + D + ++ A
Sbjct: 583 ESAREIFEKVAVERDVVIFNAMIAA 607
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 29/167 (17%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
Y + EA LLF + H+G+ KVT+V+ C+ +L G +H ++K ++ D
Sbjct: 301 YAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCS---SLRFGRMIHACALEKGLDRD 357
Query: 61 VGLGMALKDVMT---------------------LTALIVVLAMCGQGNKALEYFYEMQIR 99
+ LG AL D+ T +I + GQ +ALE F MQ+
Sbjct: 358 IVLGNALLDMYTRCGSPEEARHLFEGIPGNAVSWNTMIAGSSQKGQMKRALELFQRMQLE 417
Query: 100 GVKPDAITFVGVLVACSH-----AGLVDERISHFNLMSEKYGIRPSI 141
G+ P T++ +L A + + + R H ++S Y P+I
Sbjct: 418 GMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAI 464
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 65 MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGVLVACSHAGLVDER 124
+ ++D + T +I GQ +A+ F+ MQ GV+ DA+TF+ VL AC+ G + +
Sbjct: 88 LEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQG 147
Query: 125 ISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNMPMAL 171
S + E G+ L++I G G +A A L + M L
Sbjct: 148 RSIHAWIVES-GLEGKSVLANLLLHIYGSCGCVASAMLLFERMERDL 193
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 147/402 (36%), Positives = 224/402 (55%), Gaps = 51/402 (12%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
+ ++ +EA+ +F +++ G D T VSLL AC GA+ +G W+H YI+ + ++++
Sbjct: 183 FEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLN 242
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
V LG AL +V TA+I G G +A+E F +M+
Sbjct: 243 VKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMED 302
Query: 99 R-GVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRI 157
G P+ +TFV VL AC+HAGLV+E S + M++ Y + P +EH+ C+V +LGRAG +
Sbjct: 303 DCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFL 362
Query: 158 AKAEELIKNMPM---ALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILS 214
+A + I + A + +LGAC++H N + A++L+ L PDN G +V+LS
Sbjct: 363 DEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLS 422
Query: 215 NRYSSSRKWKKVKRIRELMAERNIKKPPGCILIEVD----------------GVVHEFVK 258
N Y+ S K +V IR+ M N++K G +IEV+ G ++ +++
Sbjct: 423 NIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLE 482
Query: 259 A--------GFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLR 310
G+ P EV+ ++EEEKE AL H+EKLA+ FGL+ + V I I+KNLR
Sbjct: 483 TLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLR 541
Query: 311 VCNDCHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
+C DCH+A IS V NR+ V D+ RFHHF+NGSCSC D+W
Sbjct: 542 ICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 14 FREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLGMAL------ 67
+R + ++ T S++ +C L AL +G +H + + +D + AL
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSK 154
Query: 68 ----------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDAITFVGV 111
K ++ +L+ G ++A++ FY+M+ G +PD+ TFV +
Sbjct: 155 CGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSL 214
Query: 112 LVACSHAGLVD-ERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELIKNM 167
L AC+ G V H ++SE G+ +++ L+ + R G + KA E+ M
Sbjct: 215 LSACAQTGAVSLGSWVHQYIISE--GLDLNVKLGTALINLYSRCGDVGKAREVFDKM 269
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 143/398 (35%), Positives = 222/398 (55%), Gaps = 46/398 (11%)
Query: 1 YVEDSACEEALLLFREVQHKGLTGDKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVD 60
YV++ +EA +FR++Q + D TMVSL+ AC+HL AL+ G H ++ + I +
Sbjct: 411 YVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASE 470
Query: 61 VGLGMAL----------------------KDVMTLTALIVVLAMCGQGNKALEYFYEMQI 98
+ AL +D+++ +I + G G +A F +M+
Sbjct: 471 TSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKH 530
Query: 99 RGVKPDAITFVGVLVACSHAGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIA 158
+ +PD +TF+ ++ ACSH+GLV E F++M+ KYGI P +EHY +V +L R G +
Sbjct: 531 QACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLD 590
Query: 159 KAEELIKNMPMALDHFVLGGLLGACRIHDNLEAAERAAQQLLELLPDNGGSYVILSNRYS 218
+A + I+ MP+ D V G LLGACR+H N++ ++ + + +L P+ G++V+LSN +S
Sbjct: 591 EAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFS 650
Query: 219 SSRKWKKVKRIRELMAERNIKKPPGCILIEVDGVVHEFV--------------------- 257
++ ++ + +R + E+ KK PGC IE++G +H F+
Sbjct: 651 AAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILV 710
Query: 258 ---KAGFVPNKSEVLFDMDEEEKETALNLHTEKLAITFGLVSPMPGVLIRIIKNLRVCND 314
K G+ + S VL D++EEEKE AL H+EKLAI FG+++ I + KNLRVC D
Sbjct: 711 DINKLGYRADTSFVLQDVEEEEKEKALLYHSEKLAIAFGVLTLSEDKTIFVTKNLRVCGD 770
Query: 315 CHTATNIISKVYNRETVVMDRNRFHHFKNGSCSCKDFW 352
CHT ++ V R +V D NRFHHFKNG CSC DFW
Sbjct: 771 CHTVIKYMTLVRKRAIIVRDANRFHHFKNGQCSCGDFW 808
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 26/184 (14%)
Query: 9 EALLLFREVQHKGLTG-DKVTMVSLLLACTHLGALEVGMWLHPYIMKKNIEVDVGLG--- 64
EA LF+++ +GL ++ S L AC +L L +G LH + K + D+ G
Sbjct: 317 EAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSL 376
Query: 65 -------------------MALKDVMTLTALIVVLAMCGQGNKALEYFYEMQIRGVKPDA 105
M +KD ++ +AL+ G+ ++A F +MQ V+PD
Sbjct: 377 LSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDV 436
Query: 106 ITFVGVLVACSH-AGLVDERISHFNLMSEKYGIRPSIEHYGCLVYILGRAGRIAKAEELI 164
T V ++ ACSH A L + H +++ GI L+ + + GRI + ++
Sbjct: 437 ATMVSLIPACSHLAALQHGKCGHGSVIVR--GIASETSICNALIDMYAKCGRIDLSRQIF 494
Query: 165 KNMP 168
MP
Sbjct: 495 DVMP 498
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.139 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,375,307,939
Number of Sequences: 23463169
Number of extensions: 214120783
Number of successful extensions: 717210
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6991
Number of HSP's successfully gapped in prelim test: 2972
Number of HSP's that attempted gapping in prelim test: 658862
Number of HSP's gapped (non-prelim): 36845
length of query: 352
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 209
effective length of database: 9,003,962,200
effective search space: 1881828099800
effective search space used: 1881828099800
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 77 (34.3 bits)