Query 048149
Match_columns 154
No_of_seqs 122 out of 1254
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 06:44:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048149.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048149hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0158 Cytochrome P450 CYP3/C 100.0 3.9E-38 8.5E-43 246.9 13.8 146 1-148 327-499 (499)
2 PLN02971 tryptophan N-hydroxyl 100.0 1.1E-35 2.3E-40 238.7 14.0 153 1-154 360-540 (543)
3 PTZ00404 cytochrome P450; Prov 100.0 4.3E-35 9.2E-40 232.1 13.5 146 1-147 316-482 (482)
4 KOG0156 Cytochrome P450 CYP2 s 100.0 3.5E-35 7.7E-40 231.7 12.7 146 1-148 319-488 (489)
5 PLN02394 trans-cinnamate 4-mon 100.0 8.9E-35 1.9E-39 231.3 13.7 148 1-148 326-502 (503)
6 PLN00168 Cytochrome P450; Prov 100.0 2.1E-34 4.5E-39 230.1 14.3 149 1-149 339-518 (519)
7 PLN02738 carotene beta-ring hy 100.0 2.9E-34 6.2E-39 233.3 14.3 151 1-153 424-600 (633)
8 KOG0157 Cytochrome P450 CYP4/C 100.0 2.6E-34 5.6E-39 228.4 13.4 147 1-149 324-497 (497)
9 PLN02290 cytokinin trans-hydro 100.0 2.5E-34 5.5E-39 229.4 13.0 146 1-149 349-516 (516)
10 PLN00110 flavonoid 3',5'-hydro 100.0 3.4E-34 7.3E-39 228.3 13.2 153 1-153 322-502 (504)
11 PLN02183 ferulate 5-hydroxylas 100.0 8.7E-34 1.9E-38 226.4 13.7 148 1-148 337-512 (516)
12 KOG0159 Cytochrome P450 CYP11/ 100.0 4.2E-34 9.2E-39 221.7 11.4 147 1-149 349-519 (519)
13 PLN02426 cytochrome P450, fami 100.0 1.5E-33 3.3E-38 224.4 14.0 148 1-148 326-500 (502)
14 PLN03112 cytochrome P450 famil 100.0 2.5E-33 5.4E-38 223.6 14.1 154 1-154 329-514 (514)
15 PLN03234 cytochrome P450 83B1; 100.0 1.9E-33 4.1E-38 223.5 13.2 147 1-147 321-498 (499)
16 PLN02169 fatty acid (omega-1)- 100.0 2.3E-33 5E-38 223.3 13.6 139 1-147 334-499 (500)
17 PF00067 p450: Cytochrome P450 100.0 3.3E-34 7.1E-39 222.5 8.4 144 1-144 295-463 (463)
18 PLN03018 homomethionine N-hydr 100.0 5.1E-33 1.1E-37 222.7 14.7 151 1-152 347-528 (534)
19 PLN02500 cytochrome P450 90B1 100.0 3.2E-33 7E-38 221.9 13.3 142 1-146 312-488 (490)
20 PLN03195 fatty acid omega-hydr 100.0 4.9E-33 1.1E-37 222.0 13.6 146 1-148 325-516 (516)
21 PLN02655 ent-kaurene oxidase 100.0 6.7E-33 1.4E-37 218.9 14.0 147 1-149 295-465 (466)
22 PLN02687 flavonoid 3'-monooxyg 100.0 5.6E-33 1.2E-37 221.8 13.4 148 1-148 330-509 (517)
23 PLN02774 brassinosteroid-6-oxi 100.0 6.6E-33 1.4E-37 218.8 12.9 142 1-146 297-462 (463)
24 PLN03141 3-epi-6-deoxocathaste 100.0 1.2E-32 2.6E-37 216.7 13.2 144 1-149 284-451 (452)
25 PLN02936 epsilon-ring hydroxyl 100.0 4.3E-32 9.3E-37 215.5 13.6 147 1-150 311-484 (489)
26 PLN02966 cytochrome P450 83A1 100.0 8E-32 1.7E-36 214.5 14.6 147 1-149 322-499 (502)
27 PLN02196 abscisic acid 8'-hydr 100.0 4.8E-32 1E-36 213.9 12.2 144 1-147 297-462 (463)
28 PLN02302 ent-kaurenoic acid ox 100.0 6.1E-32 1.3E-36 214.2 12.7 147 1-150 320-490 (490)
29 PLN02987 Cytochrome P450, fami 100.0 6.1E-31 1.3E-35 208.1 13.0 146 1-150 300-471 (472)
30 KOG0684 Cytochrome P450 [Secon 100.0 3.4E-29 7.3E-34 191.2 12.2 147 1-148 306-485 (486)
31 PLN02648 allene oxide synthase 99.9 4.8E-26 1E-30 180.3 10.1 122 1-122 306-463 (480)
32 COG2124 CypX Cytochrome P450 [ 99.9 1.1E-23 2.4E-28 164.2 10.2 117 28-147 280-410 (411)
33 PF12508 DUF3714: Protein of u 69.8 3.1 6.7E-05 29.7 1.6 37 26-62 51-94 (200)
34 PF09201 SRX: SRX; InterPro: 62.0 8.2 0.00018 25.8 2.3 22 91-112 18-39 (148)
35 PF14459 Prok-E2_C: Prokaryoti 44.8 20 0.00043 23.0 2.0 20 78-97 102-121 (131)
36 KOG3506 40S ribosomal protein 42.6 11 0.00025 20.8 0.6 11 84-94 12-22 (56)
37 TIGR03779 Bac_Flav_CT_M Bacter 42.2 17 0.00037 29.0 1.7 37 27-63 255-298 (410)
38 PF07886 BA14K: BA14K-like pro 29.4 45 0.00097 16.2 1.4 17 78-94 15-31 (31)
39 COG1759 5-formaminoimidazole-4 25.5 3.3E+02 0.0072 21.3 6.2 27 78-107 325-351 (361)
40 PHA03162 hypothetical protein; 25.1 56 0.0012 21.7 1.7 24 87-110 2-25 (135)
41 PTZ00218 40S ribosomal protein 24.9 33 0.00071 19.1 0.5 13 85-97 11-25 (54)
42 PF02663 FmdE: FmdE, Molybdenu 24.8 71 0.0015 20.8 2.2 21 90-110 4-24 (131)
43 PF11138 DUF2911: Protein of u 24.8 56 0.0012 22.1 1.7 21 43-63 52-72 (145)
44 PHA01346 hypothetical protein 24.3 74 0.0016 16.7 1.7 13 2-14 34-46 (53)
45 PF15300 INT_SG_DDX_CT_C: INTS 23.9 43 0.00094 19.3 0.9 16 26-41 39-54 (65)
46 PF12444 Sox_N: Sox developmen 21.1 68 0.0015 19.6 1.4 19 102-120 61-79 (84)
No 1
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.9e-38 Score=246.88 Aligned_cols=146 Identities=27% Similarity=0.486 Sum_probs=128.0
Q ss_pred CHHHHHHHHhHhhCCCCCCCccccCCChhHHHHHHhhhcCCC--------CCCCCccc-CeeeCCCCEEEeeccccccCC
Q 048149 1 ALKKAHDELDIHVGANRQVNESDIKNLVYLRAILKETMRLYP--------SMEDCTGS-GYHVRAGTQHFVNALKVHHDP 71 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~~~~~~~~~~~~l~~~~a~~~E~lRl~~--------~~~~~~~~-g~~ip~g~~v~~~~~~~~~~~ 71 (154)
||+|||+||+++..+...++++.+.+|+||++||+||||+|| +.+|+++. ++.||+|+.|.++.+++|+||
T Consensus 327 vQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp 406 (499)
T KOG0158|consen 327 VQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDP 406 (499)
T ss_pred HHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccccCCc
Confidence 699999999999665444999999999999999999999999 78999999 999999999999999999999
Q ss_pred -----------CCcCcCC----CCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCCccChhhcc---cee
Q 048149 72 -----------KDIDLRG----QNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDELVDMEEAK---SLI 133 (154)
Q Consensus 72 -----------~~~~~~~----~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~---~~~ 133 (154)
|||++.. .+..|+|||.|||+|+|++||.+|+|+.+++||++|+++.++.+.+. ... +.+
T Consensus 407 ~~~p~Pe~F~PERF~~~~~~~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~--~~~~~~~~~ 484 (499)
T KOG0158|consen 407 EYWPEPEKFKPERFEEENNKSRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIP--LEGDPKGFT 484 (499)
T ss_pred ccCCCcccCCCccCCCCcccccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCc--ccCCcccee
Confidence 4444322 56789999999999999999999999999999999999999843323 333 666
Q ss_pred eecCCCeEEEEeecC
Q 048149 134 ITRATPFKALLTPHL 148 (154)
Q Consensus 134 ~~~~~~~~v~~~~R~ 148 (154)
+.|..++++++++|+
T Consensus 485 l~pk~gi~Lkl~~r~ 499 (499)
T KOG0158|consen 485 LSPKGGIWLKLEPRD 499 (499)
T ss_pred eecCCceEEEEEeCC
Confidence 788999999999985
No 2
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=1.1e-35 Score=238.67 Aligned_cols=153 Identities=31% Similarity=0.523 Sum_probs=131.7
Q ss_pred CHHHHHHHHhHhhCCCCCCCccccCCChhHHHHHHhhhcCCC---------CCCCCcccCeeeCCCCEEEeeccccccCC
Q 048149 1 ALKKAHDELDIHVGANRQVNESDIKNLVYLRAILKETMRLYP---------SMEDCTGSGYHVRAGTQHFVNALKVHHDP 71 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~~~~~~~~~~~~l~~~~a~~~E~lRl~~---------~~~~~~~~g~~ip~g~~v~~~~~~~~~~~ 71 (154)
||+|+++||+++++.+..++++++.+|||++||++|++|++| +.+|+.++||.|||||.|.++.|++|+|+
T Consensus 360 vq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~ 439 (543)
T PLN02971 360 ILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNP 439 (543)
T ss_pred HHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCCh
Confidence 699999999999987778999999999999999999999999 56899999999999999999999999998
Q ss_pred -----------CCcCcCC-------CCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCC-ccChhhccce
Q 048149 72 -----------KDIDLRG-------QNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDE-LVDMEEAKSL 132 (154)
Q Consensus 72 -----------~~~~~~~-------~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~-~~~~~~~~~~ 132 (154)
|||.... .++.|+|||.|+|+|+|++||.+|+++++|.|+++|++++.++. .+++....+
T Consensus 440 ~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~- 518 (543)
T PLN02971 440 KVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH- 518 (543)
T ss_pred hhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-
Confidence 4553211 24579999999999999999999999999999999999987643 456665655
Q ss_pred eeecCCCeEEEEeecCCCCCCC
Q 048149 133 IITRATPFKALLTPHLSASLYD 154 (154)
Q Consensus 133 ~~~~~~~~~v~~~~R~~~~~~~ 154 (154)
+.....++.+.+++|.++.+|+
T Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~ 540 (543)
T PLN02971 519 DMFLSKPLVMVGELRLSEDLYP 540 (543)
T ss_pred cccccccceeeeeecCCccccc
Confidence 5434558999999998877763
No 3
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=4.3e-35 Score=232.10 Aligned_cols=146 Identities=26% Similarity=0.360 Sum_probs=125.3
Q ss_pred CHHHHHHHHhHhhCCCCCCCccccCCChhHHHHHHhhhcCCC---------CCCCCcc-cCeeeCCCCEEEeeccccccC
Q 048149 1 ALKKAHDELDIHVGANRQVNESDIKNLVYLRAILKETMRLYP---------SMEDCTG-SGYHVRAGTQHFVNALKVHHD 70 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~~~~~~~~~~~~l~~~~a~~~E~lRl~~---------~~~~~~~-~g~~ip~g~~v~~~~~~~~~~ 70 (154)
+|+||++||+++++.+..++++++.+|||++||++|+||++| +.+|+++ +|+.||+||.|.++.+++|+|
T Consensus 316 vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrd 395 (482)
T PTZ00404 316 IQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRN 395 (482)
T ss_pred HHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCC
Confidence 589999999999987667899999999999999999999999 5689999 999999999999999999999
Q ss_pred C-----------CCcCcCCCCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCCccChhhccceeeecCCC
Q 048149 71 P-----------KDIDLRGQNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDELVDMEEAKSLIITRATP 139 (154)
Q Consensus 71 ~-----------~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (154)
| |||........|+|||.|+|+|+|++||++|++++++.++++|+++..+++++......+++.. +.+
T Consensus 396 p~~~~dP~~F~PeRwl~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~ 474 (482)
T PTZ00404 396 EKYFENPEQFDPSRFLNPDSNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNK 474 (482)
T ss_pred ccccCCccccCccccCCCCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CCC
Confidence 8 4454333567899999999999999999999999999999999999876544333334455554 567
Q ss_pred eEEEEeec
Q 048149 140 FKALLTPH 147 (154)
Q Consensus 140 ~~v~~~~R 147 (154)
+++.+++|
T Consensus 475 ~~v~~~~R 482 (482)
T PTZ00404 475 FKVLLEKR 482 (482)
T ss_pred ceeeeecC
Confidence 99999887
No 4
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.5e-35 Score=231.66 Aligned_cols=146 Identities=47% Similarity=0.755 Sum_probs=127.1
Q ss_pred CHHHHHHHHhHhhCCCCCCCccccCCChhHHHHHHhhhcCCC---------CCCCCcccCeeeCCCCEEEeeccccccCC
Q 048149 1 ALKKAHDELDIHVGANRQVNESDIKNLVYLRAILKETMRLYP---------SMEDCTGSGYHVRAGTQHFVNALKVHHDP 71 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~~~~~~~~~~~~l~~~~a~~~E~lRl~~---------~~~~~~~~g~~ip~g~~v~~~~~~~~~~~ 71 (154)
||+|+++||++++|.+..++.+|+.+|||++|||+|++|++| +.+|+.++||.||+||.|+++.|++|+||
T Consensus 319 v~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp 398 (489)
T KOG0156|consen 319 VQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDP 398 (489)
T ss_pred HHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCC
Confidence 689999999999998877999999999999999999999999 68999999999999999999999999999
Q ss_pred CCcC-----------c----CCCCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCCccChhhccceeeec
Q 048149 72 KDID-----------L----RGQNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDELVDMEEAKSLIITR 136 (154)
Q Consensus 72 ~~~~-----------~----~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~ 136 (154)
+.|+ . ++....++|||.|+|.|||..+|++++.++++.++++|+|.+.++ .+++... +.+...
T Consensus 399 ~vw~dP~eF~PERFl~~~d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~~d~~e~-~~~~~~ 476 (489)
T KOG0156|consen 399 KVWEDPEEFKPERFLDSNDGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-KVDMEEA-GLTLKK 476 (489)
T ss_pred ccCCCccccChhhhcCCccccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-CCCCccc-ccceec
Confidence 5552 2 124678999999999999999999999999999999999999987 5566655 355555
Q ss_pred CCCeEEEEeecC
Q 048149 137 ATPFKALLTPHL 148 (154)
Q Consensus 137 ~~~~~v~~~~R~ 148 (154)
..++.+...+|.
T Consensus 477 ~~pl~~~~~~r~ 488 (489)
T KOG0156|consen 477 KKPLKAVPVPRL 488 (489)
T ss_pred CCcceeeeecCC
Confidence 666777666653
No 5
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00 E-value=8.9e-35 Score=231.32 Aligned_cols=148 Identities=33% Similarity=0.595 Sum_probs=126.0
Q ss_pred CHHHHHHHHhHhhCCCCCCCccccCCChhHHHHHHhhhcCCC---------CCCCCcccCeeeCCCCEEEeeccccccCC
Q 048149 1 ALKKAHDELDIHVGANRQVNESDIKNLVYLRAILKETMRLYP---------SMEDCTGSGYHVRAGTQHFVNALKVHHDP 71 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~~~~~~~~~~~~l~~~~a~~~E~lRl~~---------~~~~~~~~g~~ip~g~~v~~~~~~~~~~~ 71 (154)
+|+||++||+++++.+..++++++.+|||++||++|++|++| +.+|++++|+.||+||.|.++.+++|+|+
T Consensus 326 vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~ 405 (503)
T PLN02394 326 IQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNP 405 (503)
T ss_pred HHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCc
Confidence 589999999999987667899999999999999999999999 46688999999999999999999999997
Q ss_pred -----------CCcCcCC-------CCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCC-ccChhhccc-
Q 048149 72 -----------KDIDLRG-------QNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDE-LVDMEEAKS- 131 (154)
Q Consensus 72 -----------~~~~~~~-------~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~-~~~~~~~~~- 131 (154)
|||.... ..+.|+|||.|+|+|+|++||.+|+++++|.++++|++.+.++. .++.....+
T Consensus 406 ~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~ 485 (503)
T PLN02394 406 ELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQ 485 (503)
T ss_pred ccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCc
Confidence 5563211 24579999999999999999999999999999999999987765 244444443
Q ss_pred eeeecCCCeEEEEeecC
Q 048149 132 LIITRATPFKALLTPHL 148 (154)
Q Consensus 132 ~~~~~~~~~~v~~~~R~ 148 (154)
+.+..+.++.+++.+|.
T Consensus 486 ~~~~~~~~~~~~~~~r~ 502 (503)
T PLN02394 486 FSLHIAKHSTVVFKPRS 502 (503)
T ss_pred eeeccCCCceEEeecCC
Confidence 45546668999999996
No 6
>PLN00168 Cytochrome P450; Provisional
Probab=100.00 E-value=2.1e-34 Score=230.13 Aligned_cols=149 Identities=28% Similarity=0.531 Sum_probs=126.4
Q ss_pred CHHHHHHHHhHhhCCC-CCCCccccCCChhHHHHHHhhhcCCC---------CCCCCcccCeeeCCCCEEEeeccccccC
Q 048149 1 ALKKAHDELDIHVGAN-RQVNESDIKNLVYLRAILKETMRLYP---------SMEDCTGSGYHVRAGTQHFVNALKVHHD 70 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~~-~~~~~~~~~~l~~~~a~~~E~lRl~~---------~~~~~~~~g~~ip~g~~v~~~~~~~~~~ 70 (154)
+|+|+++||+++++.+ ..++++++.+|||++||++|++|++| +.+|++++|+.||+|+.|.++.+++|+|
T Consensus 339 ~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d 418 (519)
T PLN00168 339 IQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRD 418 (519)
T ss_pred HHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcC
Confidence 5899999999998753 56899999999999999999999998 5689999999999999999999999999
Q ss_pred C-----------CCcCcC----------CCCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCCccChhhc
Q 048149 71 P-----------KDIDLR----------GQNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDELVDMEEA 129 (154)
Q Consensus 71 ~-----------~~~~~~----------~~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~ 129 (154)
| |||... ...+.|+|||.|+|+|+|++||.+|++++++.|+++|+|++.++...+....
T Consensus 419 ~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~ 498 (519)
T PLN00168 419 EREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEK 498 (519)
T ss_pred ccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhh
Confidence 8 555321 1235799999999999999999999999999999999999976544343333
Q ss_pred cceeeecCCCeEEEEeecCC
Q 048149 130 KSLIITRATPFKALLTPHLS 149 (154)
Q Consensus 130 ~~~~~~~~~~~~v~~~~R~~ 149 (154)
.+++..++.++++.+++|+.
T Consensus 499 ~~~~~~~~~~~~~~~~~R~~ 518 (519)
T PLN00168 499 REFTTVMAKPLRARLVPRRT 518 (519)
T ss_pred ceeEEeecCCcEEEEEeccC
Confidence 44556677789999999974
No 7
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00 E-value=2.9e-34 Score=233.29 Aligned_cols=151 Identities=29% Similarity=0.502 Sum_probs=129.9
Q ss_pred CHHHHHHHHhHhhCCCCCCCccccCCChhHHHHHHhhhcCCC--------CCCCCcccCeeeCCCCEEEeeccccccCC-
Q 048149 1 ALKKAHDELDIHVGANRQVNESDIKNLVYLRAILKETMRLYP--------SMEDCTGSGYHVRAGTQHFVNALKVHHDP- 71 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~~~~~~~~~~~~l~~~~a~~~E~lRl~~--------~~~~~~~~g~~ip~g~~v~~~~~~~~~~~- 71 (154)
+|+||++||+++++ +..++++++++|||++|||+|+|||+| +.+|+.++||.||+||.|.++.|.+|+||
T Consensus 424 vq~kLreEl~~v~~-~~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ 502 (633)
T PLN02738 424 VVAKLQEEVDSVLG-DRFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPK 502 (633)
T ss_pred HHHHHHHHHHHhcC-CCCCCHHHHccCHHHHHHHHHHHhcCCCccccceeeccCceECCEEECCCCEEEecHHHHhCCcc
Confidence 58999999999987 467899999999999999999999999 56888899999999999999999999998
Q ss_pred ----------CCcCcC-------CCCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCCccChhhccceee
Q 048149 72 ----------KDIDLR-------GQNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDELVDMEEAKSLII 134 (154)
Q Consensus 72 ----------~~~~~~-------~~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~ 134 (154)
|||..+ ...+.|+|||.|+|+|+|++||++|+++++|.|+++|+|++.++.. +.....+.++
T Consensus 503 ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~-~~~~~~~~~~ 581 (633)
T PLN02738 503 HWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP-PVKMTTGATI 581 (633)
T ss_pred ccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC-CcccccceEE
Confidence 566311 1346799999999999999999999999999999999999877542 2333345667
Q ss_pred ecCCCeEEEEeecCCCCCC
Q 048149 135 TRATPFKALLTPHLSASLY 153 (154)
Q Consensus 135 ~~~~~~~v~~~~R~~~~~~ 153 (154)
.|+.++++.+++|....+.
T Consensus 582 ~p~~~l~v~l~~R~~~~~~ 600 (633)
T PLN02738 582 HTTEGLKMTVTRRTKPPVI 600 (633)
T ss_pred eeCCCcEEEEEECCCCCCC
Confidence 7888999999999887654
No 8
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00 E-value=2.6e-34 Score=228.44 Aligned_cols=147 Identities=28% Similarity=0.490 Sum_probs=125.4
Q ss_pred CHHHHHHHHhHhhCCCCCC-CccccCCChhHHHHHHhhhcCCC--------CCCCCcc-cCeeeCCCCEEEeeccccccC
Q 048149 1 ALKKAHDELDIHVGANRQV-NESDIKNLVYLRAILKETMRLYP--------SMEDCTG-SGYHVRAGTQHFVNALKVHHD 70 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~~~~~-~~~~~~~l~~~~a~~~E~lRl~~--------~~~~~~~-~g~~ip~g~~v~~~~~~~~~~ 70 (154)
||+|+++|++++++++... .....++|+|+++|++||||||| +.+|+.+ +|+.||+|+.|+++.+++|||
T Consensus 324 vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~ 403 (497)
T KOG0157|consen 324 VQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRD 403 (497)
T ss_pred HHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccC
Confidence 6999999999999854332 22222369999999999999999 7899999 589999999999999999998
Q ss_pred C------------CCcCcC-----CCCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCCccChhhcccee
Q 048149 71 P------------KDIDLR-----GQNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDELVDMEEAKSLI 133 (154)
Q Consensus 71 ~------------~~~~~~-----~~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~ 133 (154)
+ +||..+ .++++|+|||+|+|+|+|++||++||+++++.++++|++++..+.. ..+...++
T Consensus 404 ~~~~~~dp~~F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~--~~~~~~~~ 481 (497)
T KOG0157|consen 404 PRVWGEDPEEFDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK--PKPVPELT 481 (497)
T ss_pred ccccCCChhhcCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC--ceeeeEEE
Confidence 7 555432 1368999999999999999999999999999999999999988643 56677888
Q ss_pred eecCCCeEEEEeecCC
Q 048149 134 ITRATPFKALLTPHLS 149 (154)
Q Consensus 134 ~~~~~~~~v~~~~R~~ 149 (154)
++|..+++|.+++|..
T Consensus 482 l~~~~gl~v~~~~r~~ 497 (497)
T KOG0157|consen 482 LRPKNGLKVKLRPRGS 497 (497)
T ss_pred EEecCCeEEEEEeCCC
Confidence 8999999999999963
No 9
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00 E-value=2.5e-34 Score=229.40 Aligned_cols=146 Identities=23% Similarity=0.373 Sum_probs=126.1
Q ss_pred CHHHHHHHHhHhhCCCCCCCccccCCChhHHHHHHhhhcCCC--------CCCCCcccCeeeCCCCEEEeeccccccCCC
Q 048149 1 ALKKAHDELDIHVGANRQVNESDIKNLVYLRAILKETMRLYP--------SMEDCTGSGYHVRAGTQHFVNALKVHHDPK 72 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~~~~~~~~~~~~l~~~~a~~~E~lRl~~--------~~~~~~~~g~~ip~g~~v~~~~~~~~~~~~ 72 (154)
+|+|+++||++++|.+ .++++++++|||++|||+||+|++| +.+|++++|+.||+||.|.++.+++|+||+
T Consensus 349 vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~ 427 (516)
T PLN02290 349 WQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEE 427 (516)
T ss_pred HHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEEEecHHHhcCChh
Confidence 5899999999999864 7899999999999999999999999 578999999999999999999999999986
Q ss_pred CcC-c------C-------CCCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCCccChhhccceeeecCC
Q 048149 73 DID-L------R-------GQNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDELVDMEEAKSLIITRAT 138 (154)
Q Consensus 73 ~~~-~------~-------~~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~ 138 (154)
.|. + + .....|+|||.|+|+|+|++||.+|++++++.|+++|++++.++.. ......++..|..
T Consensus 428 ~~~~dP~~F~PeRfl~~~~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~--~~~~~~~~~~p~~ 505 (516)
T PLN02290 428 LWGKDANEFNPDRFAGRPFAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR--HAPVVVLTIKPKY 505 (516)
T ss_pred hhCCChhhcCccccCCCCCCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc--cCccceeeecCCC
Confidence 662 1 1 1235699999999999999999999999999999999999876532 1222356777889
Q ss_pred CeEEEEeecCC
Q 048149 139 PFKALLTPHLS 149 (154)
Q Consensus 139 ~~~v~~~~R~~ 149 (154)
++++.+++|+|
T Consensus 506 ~~~~~~~~~~~ 516 (516)
T PLN02290 506 GVQVCLKPLNP 516 (516)
T ss_pred CCeEEEEeCCC
Confidence 99999999986
No 10
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=3.4e-34 Score=228.26 Aligned_cols=153 Identities=39% Similarity=0.682 Sum_probs=130.2
Q ss_pred CHHHHHHHHhHhhCCCCCCCccccCCChhHHHHHHhhhcCCC---------CCCCCcccCeeeCCCCEEEeeccccccCC
Q 048149 1 ALKKAHDELDIHVGANRQVNESDIKNLVYLRAILKETMRLYP---------SMEDCTGSGYHVRAGTQHFVNALKVHHDP 71 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~~~~~~~~~~~~l~~~~a~~~E~lRl~~---------~~~~~~~~g~~ip~g~~v~~~~~~~~~~~ 71 (154)
+|+|+++|++++++.+..++++++++|||++||++|++|++| +.+|+.++|+.||+||.|.++.+++|+|+
T Consensus 322 ~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~ 401 (504)
T PLN00110 322 ILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDP 401 (504)
T ss_pred HHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCCh
Confidence 589999999999987677899999999999999999999998 56788999999999999999999999998
Q ss_pred -----------CCcCcCC--------CCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCCccChhhccce
Q 048149 72 -----------KDIDLRG--------QNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDELVDMEEAKSL 132 (154)
Q Consensus 72 -----------~~~~~~~--------~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~ 132 (154)
|||.... ....|+|||.|+|.|+|++||.+|++++++.|+++|++++.++.+.+.....++
T Consensus 402 ~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~ 481 (504)
T PLN00110 402 DVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGL 481 (504)
T ss_pred hhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCccccccc
Confidence 4453211 124799999999999999999999999999999999999977654444344566
Q ss_pred eeecCCCeEEEEeecCCCCCC
Q 048149 133 IITRATPFKALLTPHLSASLY 153 (154)
Q Consensus 133 ~~~~~~~~~v~~~~R~~~~~~ 153 (154)
++.|..++++.+++|.+-+.|
T Consensus 482 ~~~~~~~~~~~~~~r~~~~~~ 502 (504)
T PLN00110 482 ALQKAVPLSAMVTPRLHQSAY 502 (504)
T ss_pred ccccCCCceEeeccCCCchhc
Confidence 777888999999999755443
No 11
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=8.7e-34 Score=226.41 Aligned_cols=148 Identities=39% Similarity=0.633 Sum_probs=122.6
Q ss_pred CHHHHHHHHhHhhCCCCCCCccccCCChhHHHHHHhhhcCCC--------CCCCCcccCeeeCCCCEEEeeccccccCC-
Q 048149 1 ALKKAHDELDIHVGANRQVNESDIKNLVYLRAILKETMRLYP--------SMEDCTGSGYHVRAGTQHFVNALKVHHDP- 71 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~~~~~~~~~~~~l~~~~a~~~E~lRl~~--------~~~~~~~~g~~ip~g~~v~~~~~~~~~~~- 71 (154)
+|+|+++||+++++.+..++++++.+|+|++||++|++|++| +.+|++++|+.||+||.|.++.+++|+|+
T Consensus 337 vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~ 416 (516)
T PLN02183 337 DLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRDKN 416 (516)
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEehhhhcCCcc
Confidence 589999999999986667899999999999999999999999 67899999999999999999999999998
Q ss_pred ----------CCcCcCC------CCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCCc---cChhhccce
Q 048149 72 ----------KDIDLRG------QNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDEL---VDMEEAKSL 132 (154)
Q Consensus 72 ----------~~~~~~~------~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~---~~~~~~~~~ 132 (154)
|||..++ ..+.|+|||.|+|+|+|++||.+|+++++|.++++|++++.++.. .......+.
T Consensus 417 ~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~ 496 (516)
T PLN02183 417 SWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGL 496 (516)
T ss_pred ccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhcccc
Confidence 4443211 245799999999999999999999999999999999999877532 222233344
Q ss_pred eeecCCCeEEEEeecC
Q 048149 133 IITRATPFKALLTPHL 148 (154)
Q Consensus 133 ~~~~~~~~~v~~~~R~ 148 (154)
...+..++.+.+++|-
T Consensus 497 ~~~~~~~~~~~~~~r~ 512 (516)
T PLN02183 497 TAPRATRLVAVPTYRL 512 (516)
T ss_pred ccccCCCcEEEeecCC
Confidence 4434556777777773
No 12
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.2e-34 Score=221.67 Aligned_cols=147 Identities=31% Similarity=0.465 Sum_probs=131.3
Q ss_pred CHHHHHHHHhHhhCC-CCCCCccccCCChhHHHHHHhhhcCCC--------CCCCCcccCeeeCCCCEEEeeccccccCC
Q 048149 1 ALKKAHDELDIHVGA-NRQVNESDIKNLVYLRAILKETMRLYP--------SMEDCTGSGYHVRAGTQHFVNALKVHHDP 71 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~-~~~~~~~~~~~l~~~~a~~~E~lRl~~--------~~~~~~~~g~~ip~g~~v~~~~~~~~~~~ 71 (154)
+|+||++||..++.. +..++.+.+.+|||++||||||+|||| ..+|..++||.||+||.|.+..+...+||
T Consensus 349 ~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~ 428 (519)
T KOG0159|consen 349 VQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNP 428 (519)
T ss_pred HHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhhccCh
Confidence 599999999999876 578899999999999999999999999 67899999999999999999999999987
Q ss_pred -----------CCcCc----CCCCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCCccChhhccceeeec
Q 048149 72 -----------KDIDL----RGQNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDELVDMEEAKSLIITR 136 (154)
Q Consensus 72 -----------~~~~~----~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~ 136 (154)
+||-. ..+++.++|||.|+|+|+|+++|.+|+.+.+|+++++|+++..... +.+....+++.|
T Consensus 429 ~~F~~p~~F~PeRWL~~~~~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~--pv~~~~~~il~P 506 (519)
T KOG0159|consen 429 AYFPDPEEFLPERWLKPSTKTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEE--PVEYVYRFILVP 506 (519)
T ss_pred hhCCCccccChhhhcccccCCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCC--CccceeEEEEcC
Confidence 56632 2378999999999999999999999999999999999999998864 445557777779
Q ss_pred CCCeEEEEeecCC
Q 048149 137 ATPFKALLTPHLS 149 (154)
Q Consensus 137 ~~~~~v~~~~R~~ 149 (154)
..++.+.|++|+.
T Consensus 507 ~~~l~f~f~~r~~ 519 (519)
T KOG0159|consen 507 NRPLRFKFRPRNE 519 (519)
T ss_pred CCCcceeeeeCCC
Confidence 9999999999873
No 13
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00 E-value=1.5e-33 Score=224.37 Aligned_cols=148 Identities=23% Similarity=0.277 Sum_probs=123.8
Q ss_pred CHHHHHHHHhHhhCCC-CCCCccccCCChhHHHHHHhhhcCCC--------CCCCCcc-cCeeeCCCCEEEeeccccccC
Q 048149 1 ALKKAHDELDIHVGAN-RQVNESDIKNLVYLRAILKETMRLYP--------SMEDCTG-SGYHVRAGTQHFVNALKVHHD 70 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~~-~~~~~~~~~~l~~~~a~~~E~lRl~~--------~~~~~~~-~g~~ip~g~~v~~~~~~~~~~ 70 (154)
+|+|+++||+++.+.+ ..++++++.+|||++||++|+||++| +.+|..+ +|+.||+||.|.++.+++|+|
T Consensus 326 v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd 405 (502)
T PLN02426 326 VASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRM 405 (502)
T ss_pred HHHHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCC
Confidence 5899999999988753 36899999999999999999999999 4556666 999999999999999999999
Q ss_pred CCCc------------CcC-----CCCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCCccChhhcccee
Q 048149 71 PKDI------------DLR-----GQNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDELVDMEEAKSLI 133 (154)
Q Consensus 71 ~~~~------------~~~-----~~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~ 133 (154)
++.| ..+ ..++.++|||.|+|.|+|++||.+|++++++.++++|++++..+.........+++
T Consensus 406 ~~~~G~dp~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~ 485 (502)
T PLN02426 406 ERIWGPDCLEFKPERWLKNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLT 485 (502)
T ss_pred ccccCcChhhcCccccCCCCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeE
Confidence 8544 221 12457899999999999999999999999999999999998654322223344677
Q ss_pred eecCCCeEEEEeecC
Q 048149 134 ITRATPFKALLTPHL 148 (154)
Q Consensus 134 ~~~~~~~~v~~~~R~ 148 (154)
+.|..+++|++++|.
T Consensus 486 ~~~~~gl~v~~~~r~ 500 (502)
T PLN02426 486 ATVRGGLPVRVRERV 500 (502)
T ss_pred EecCCCEEEEEEEcc
Confidence 788999999999985
No 14
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=223.59 Aligned_cols=154 Identities=35% Similarity=0.663 Sum_probs=129.5
Q ss_pred CHHHHHHHHhHhhCCCCCCCccccCCChhHHHHHHhhhcCCC---------CCCCCcccCeeeCCCCEEEeeccccccCC
Q 048149 1 ALKKAHDELDIHVGANRQVNESDIKNLVYLRAILKETMRLYP---------SMEDCTGSGYHVRAGTQHFVNALKVHHDP 71 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~~~~~~~~~~~~l~~~~a~~~E~lRl~~---------~~~~~~~~g~~ip~g~~v~~~~~~~~~~~ 71 (154)
+|+|+++||+++++.++.++++++.+|||++||++|++|++| +.+|+.++|+.||+||.|.++.+++|+|+
T Consensus 329 vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~ 408 (514)
T PLN03112 329 VLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNT 408 (514)
T ss_pred HHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCc
Confidence 589999999999987777999999999999999999999998 56888899999999999999999999998
Q ss_pred -----------CCc-CcC--------CCCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCC---ccChhh
Q 048149 72 -----------KDI-DLR--------GQNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDE---LVDMEE 128 (154)
Q Consensus 72 -----------~~~-~~~--------~~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~---~~~~~~ 128 (154)
+|| +.. ...+.|+|||.|+|+|+|++||.+|++++++.++++|+|++.++. ......
T Consensus 409 ~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~ 488 (514)
T PLN03112 409 KIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQE 488 (514)
T ss_pred ccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCcc
Confidence 442 211 013579999999999999999999999999999999999987543 223333
Q ss_pred ccceeeecCCCeEEEEeecCCCCCCC
Q 048149 129 AKSLIITRATPFKALLTPHLSASLYD 154 (154)
Q Consensus 129 ~~~~~~~~~~~~~v~~~~R~~~~~~~ 154 (154)
..++...+..++++.+.+|.....|.
T Consensus 489 ~~~~~~~~~~~~~~~~~~r~~~~~~~ 514 (514)
T PLN03112 489 VYGMTMPKAKPLRAVATPRLAPHLYG 514 (514)
T ss_pred ccCcccccCCCeEEEeecCCcccccC
Confidence 44566666779999999998776663
No 15
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=1.9e-33 Score=223.50 Aligned_cols=147 Identities=37% Similarity=0.622 Sum_probs=123.0
Q ss_pred CHHHHHHHHhHhhCCCCCCCccccCCChhHHHHHHhhhcCCC---------CCCCCcccCeeeCCCCEEEeeccccccCC
Q 048149 1 ALKKAHDELDIHVGANRQVNESDIKNLVYLRAILKETMRLYP---------SMEDCTGSGYHVRAGTQHFVNALKVHHDP 71 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~~~~~~~~~~~~l~~~~a~~~E~lRl~~---------~~~~~~~~g~~ip~g~~v~~~~~~~~~~~ 71 (154)
+|+|+++||+++++++..++++++++|||++||++|++|++| +.+|+.++|+.||+||.|.++.+++|+||
T Consensus 321 v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~ 400 (499)
T PLN03234 321 AMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDT 400 (499)
T ss_pred HHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCc
Confidence 589999999999987777899999999999999999999999 46788899999999999999999999998
Q ss_pred CCcC------------cC-------CCCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCC---ccChhhc
Q 048149 72 KDID------------LR-------GQNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDE---LVDMEEA 129 (154)
Q Consensus 72 ~~~~------------~~-------~~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~---~~~~~~~ 129 (154)
+.|. .. .....|+|||.|+|+|+|+++|.+|+++++|.|+++|++++.++. .+.....
T Consensus 401 ~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~ 480 (499)
T PLN03234 401 AAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVM 480 (499)
T ss_pred ccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccc
Confidence 5552 11 124578999999999999999999999999999999999998752 2333345
Q ss_pred cceeeecCCCeEEEEeec
Q 048149 130 KSLIITRATPFKALLTPH 147 (154)
Q Consensus 130 ~~~~~~~~~~~~v~~~~R 147 (154)
.++...|.+.+.+.+++|
T Consensus 481 ~~~~~~~~~~~~~~~~~~ 498 (499)
T PLN03234 481 TGLAMHKKEHLVLAPTKH 498 (499)
T ss_pred cccccccCCCeEEEeecC
Confidence 566666777666666554
No 16
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00 E-value=2.3e-33 Score=223.28 Aligned_cols=139 Identities=25% Similarity=0.432 Sum_probs=117.3
Q ss_pred CHHHHHHHHhHhhCCCCCCCccccCCChhHHHHHHhhhcCCC--------CCCCCc-ccCeeeCCCCEEEeeccccccCC
Q 048149 1 ALKKAHDELDIHVGANRQVNESDIKNLVYLRAILKETMRLYP--------SMEDCT-GSGYHVRAGTQHFVNALKVHHDP 71 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~~~~~~~~~~~~l~~~~a~~~E~lRl~~--------~~~~~~-~~g~~ip~g~~v~~~~~~~~~~~ 71 (154)
||+|+++||++++ +++++.+|||++||++||||++| +.+|.. ++|+.||+|+.|.++.|++|||+
T Consensus 334 vq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~ 407 (500)
T PLN02169 334 VMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMR 407 (500)
T ss_pred HHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCCc
Confidence 6999999999764 57889999999999999999999 345544 59999999999999999999998
Q ss_pred CCc------------CcC-C-----CCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCCccChhhcccee
Q 048149 72 KDI------------DLR-G-----QNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDELVDMEEAKSLI 133 (154)
Q Consensus 72 ~~~------------~~~-~-----~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~ 133 (154)
+.| ... . .++.|+|||+|+|+|+|++||.+|++++++.|+++|++++.++..+ ....+++
T Consensus 408 ~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~--~~~~~~~ 485 (500)
T PLN02169 408 SVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKI--EAIPSIL 485 (500)
T ss_pred cccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCc--ccccceE
Confidence 554 211 1 1568999999999999999999999999999999999999765433 3345567
Q ss_pred eecCCCeEEEEeec
Q 048149 134 ITRATPFKALLTPH 147 (154)
Q Consensus 134 ~~~~~~~~v~~~~R 147 (154)
+.|..++++++++|
T Consensus 486 l~~~~gl~l~l~~~ 499 (500)
T PLN02169 486 LRMKHGLKVTVTKK 499 (500)
T ss_pred EecCCCEEEEEEeC
Confidence 77899999999987
No 17
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00 E-value=3.3e-34 Score=222.48 Aligned_cols=144 Identities=35% Similarity=0.612 Sum_probs=119.7
Q ss_pred CHHHHHHHHhHhhCCCCCCCccccCCChhHHHHHHhhhcCCC---------CCCCCcccCeeeCCCCEEEeeccccccCC
Q 048149 1 ALKKAHDELDIHVGANRQVNESDIKNLVYLRAILKETMRLYP---------SMEDCTGSGYHVRAGTQHFVNALKVHHDP 71 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~~~~~~~~~~~~l~~~~a~~~E~lRl~~---------~~~~~~~~g~~ip~g~~v~~~~~~~~~~~ 71 (154)
+|+||++||+++.+.+..++.+++.+|||++||++|++|++| +.+|++++|+.||+||.|+++.+++|+|+
T Consensus 295 ~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~ 374 (463)
T PF00067_consen 295 VQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDP 374 (463)
T ss_dssp HHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTST
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 589999999999977678899999999999999999999999 56799999999999999999999999998
Q ss_pred C-----------CcCcC-----CCCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCCccChhhccceeee
Q 048149 72 K-----------DIDLR-----GQNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDELVDMEEAKSLIIT 135 (154)
Q Consensus 72 ~-----------~~~~~-----~~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~ 135 (154)
+ ||... .....|+|||.|+|.|+|++||.+|++++++.++++|+|++.++..............
T Consensus 375 ~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~ 454 (463)
T PF00067_consen 375 EYFPDPDEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLL 454 (463)
T ss_dssp TTSSSTTS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSE
T ss_pred cccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEe
Confidence 4 44322 2467799999999999999999999999999999999999976543333332222333
Q ss_pred cCCCeEEEE
Q 048149 136 RATPFKALL 144 (154)
Q Consensus 136 ~~~~~~v~~ 144 (154)
|+.+++|.|
T Consensus 455 ~~~~~~~~~ 463 (463)
T PF00067_consen 455 PPKPLKVKF 463 (463)
T ss_dssp EESSSEEEE
T ss_pred eCCCcEEeC
Confidence 666777765
No 18
>PLN03018 homomethionine N-hydroxylase
Probab=100.00 E-value=5.1e-33 Score=222.72 Aligned_cols=151 Identities=33% Similarity=0.529 Sum_probs=126.0
Q ss_pred CHHHHHHHHhHhhCCCCCCCccccCCChhHHHHHHhhhcCCC---------CCCCCcccCeeeCCCCEEEeeccccccCC
Q 048149 1 ALKKAHDELDIHVGANRQVNESDIKNLVYLRAILKETMRLYP---------SMEDCTGSGYHVRAGTQHFVNALKVHHDP 71 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~~~~~~~~~~~~l~~~~a~~~E~lRl~~---------~~~~~~~~g~~ip~g~~v~~~~~~~~~~~ 71 (154)
+|+|+++||+++++.+..++++++.+|||++||++|++|++| +.+|+.++|+.||+|+.|.++.+++|+||
T Consensus 347 ~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp 426 (534)
T PLN03018 347 ILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNP 426 (534)
T ss_pred HHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCc
Confidence 589999999999987778899999999999999999999999 57899999999999999999999999998
Q ss_pred -----------CCcCcC----------CCCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCC-ccChhhc
Q 048149 72 -----------KDIDLR----------GQNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDE-LVDMEEA 129 (154)
Q Consensus 72 -----------~~~~~~----------~~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~-~~~~~~~ 129 (154)
+||... .....|+|||.|+|.|+|++||.+|++++++.|+++|++++.++. .++....
T Consensus 427 ~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~ 506 (534)
T PLN03018 427 KIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEED 506 (534)
T ss_pred ccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCcccc
Confidence 455321 123579999999999999999999999999999999999987653 2233223
Q ss_pred cceeeecCCCeEEEEeecCCCCC
Q 048149 130 KSLIITRATPFKALLTPHLSASL 152 (154)
Q Consensus 130 ~~~~~~~~~~~~v~~~~R~~~~~ 152 (154)
.+.+. .+.++++.+++|....+
T Consensus 507 ~~~~~-~p~~~~v~~~~R~~~~~ 528 (534)
T PLN03018 507 DASLL-MAKPLLLSVEPRLAPNL 528 (534)
T ss_pred cccee-cCCCeEEEEEecccccc
Confidence 34444 45689999999954433
No 19
>PLN02500 cytochrome P450 90B1
Probab=100.00 E-value=3.2e-33 Score=221.86 Aligned_cols=142 Identities=20% Similarity=0.331 Sum_probs=117.7
Q ss_pred CHHHHHHHHhHhhC-----CCCCCCccccCCChhHHHHHHhhhcCCC--------CCCCCcccCeeeCCCCEEEeecccc
Q 048149 1 ALKKAHDELDIHVG-----ANRQVNESDIKNLVYLRAILKETMRLYP--------SMEDCTGSGYHVRAGTQHFVNALKV 67 (154)
Q Consensus 1 vq~kl~~Ei~~~~~-----~~~~~~~~~~~~l~~~~a~~~E~lRl~~--------~~~~~~~~g~~ip~g~~v~~~~~~~ 67 (154)
+|+|+++||+++.+ .+..++++++.+|||++||++|++|++| +.+|++++||.||+||.|.++.|++
T Consensus 312 vq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~ 391 (490)
T PLN02500 312 AVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAV 391 (490)
T ss_pred HHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhc
Confidence 58999999998863 2345899999999999999999999999 6789999999999999999999999
Q ss_pred ccCC-----------CCcCcCC-----------CCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCCccC
Q 048149 68 HHDP-----------KDIDLRG-----------QNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDELVD 125 (154)
Q Consensus 68 ~~~~-----------~~~~~~~-----------~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~ 125 (154)
|+|| |||..+. .++.|+|||.|+|.|+|++||.+|++++++.++++|+|++.++.. .
T Consensus 392 hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~-~ 470 (490)
T PLN02500 392 HLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQ-A 470 (490)
T ss_pred ccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCc-c
Confidence 9998 4443211 246799999999999999999999999999999999999877543 1
Q ss_pred hhhccceeeecCCCeEEEEee
Q 048149 126 MEEAKSLIITRATPFKALLTP 146 (154)
Q Consensus 126 ~~~~~~~~~~~~~~~~v~~~~ 146 (154)
.. ...+ .++.++.|++.+
T Consensus 471 ~~--~~~~-~~~~~l~~~~~~ 488 (490)
T PLN02500 471 FA--FPFV-DFPKGLPIRVRR 488 (490)
T ss_pred ee--cccc-cCCCCceEEEEe
Confidence 11 1222 345688888765
No 20
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00 E-value=4.9e-33 Score=222.05 Aligned_cols=146 Identities=26% Similarity=0.320 Sum_probs=119.8
Q ss_pred CHHHHHHHHhHhhCC--------------------CCCCCccccCCChhHHHHHHhhhcCCC--------CCCCCcc-cC
Q 048149 1 ALKKAHDELDIHVGA--------------------NRQVNESDIKNLVYLRAILKETMRLYP--------SMEDCTG-SG 51 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~--------------------~~~~~~~~~~~l~~~~a~~~E~lRl~~--------~~~~~~~-~g 51 (154)
+|+||++||+++++. +..++++++.+|||++|||+|+||++| +.+|..+ +|
T Consensus 325 vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G 404 (516)
T PLN03195 325 VAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDG 404 (516)
T ss_pred HHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCC
Confidence 589999999987642 245789999999999999999999999 3455554 89
Q ss_pred eeeCCCCEEEeeccccccCCCCc------------CcC-----CCCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcC
Q 048149 52 YHVRAGTQHFVNALKVHHDPKDI------------DLR-----GQNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGF 114 (154)
Q Consensus 52 ~~ip~g~~v~~~~~~~~~~~~~~------------~~~-----~~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f 114 (154)
+.||+||.|.++.+++|+||+.| ... ..++.|+|||.|+|+|+|++||++|++++++.++++|
T Consensus 405 ~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f 484 (516)
T PLN03195 405 TKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFF 484 (516)
T ss_pred cEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999998544 221 1245799999999999999999999999999999999
Q ss_pred eeeCCCCCccChhhccceeeecCCCeEEEEeecC
Q 048149 115 DFATPLDELVDMEEAKSLIITRATPFKALLTPHL 148 (154)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 148 (154)
++++.++.+. ......++.|..+++|++++|+
T Consensus 485 ~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~r~ 516 (516)
T PLN03195 485 KFQLVPGHPV--KYRMMTILSMANGLKVTVSRRS 516 (516)
T ss_pred eeEecCCCcc--eeeeeeEEecCCCEEEEEEeCC
Confidence 9998764432 2233445668889999999884
No 21
>PLN02655 ent-kaurene oxidase
Probab=100.00 E-value=6.7e-33 Score=218.92 Aligned_cols=147 Identities=30% Similarity=0.473 Sum_probs=125.9
Q ss_pred CHHHHHHHHhHhhCCCCCCCccccCCChhHHHHHHhhhcCCC---------CCCCCcccCeeeCCCCEEEeeccccccCC
Q 048149 1 ALKKAHDELDIHVGANRQVNESDIKNLVYLRAILKETMRLYP---------SMEDCTGSGYHVRAGTQHFVNALKVHHDP 71 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~~~~~~~~~~~~l~~~~a~~~E~lRl~~---------~~~~~~~~g~~ip~g~~v~~~~~~~~~~~ 71 (154)
+|+|+++||+++++.+ .++++++.++||++||++|+||++| +.+|++++|+.||+||.|.++.+++|+|+
T Consensus 295 ~~~~l~~Ei~~~~~~~-~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~ 373 (466)
T PLN02655 295 KQERLYREIREVCGDE-RVTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDK 373 (466)
T ss_pred HHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCc
Confidence 5899999999999864 4899999999999999999999999 56899999999999999999999999998
Q ss_pred CCc-----------CcCC----CCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCCccChhhccceeeec
Q 048149 72 KDI-----------DLRG----QNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDELVDMEEAKSLIITR 136 (154)
Q Consensus 72 ~~~-----------~~~~----~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~ 136 (154)
+.| ...+ ....++|||.|+|.|+|++||..+++++++.|+++|++++..+.. ......+++..+
T Consensus 374 ~~~~~p~~F~PeR~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~ 452 (466)
T PLN02655 374 KRWENPEEWDPERFLGEKYESADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-EKEDTVQLTTQK 452 (466)
T ss_pred ccCCChhccCccccCCCCcccCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-cccchhheeEee
Confidence 443 2211 246799999999999999999999999999999999999876532 223345666778
Q ss_pred CCCeEEEEeecCC
Q 048149 137 ATPFKALLTPHLS 149 (154)
Q Consensus 137 ~~~~~v~~~~R~~ 149 (154)
..++.+.+++|..
T Consensus 453 ~~~~~~~~~~r~~ 465 (466)
T PLN02655 453 LHPLHAHLKPRGS 465 (466)
T ss_pred cCCcEEEEeecCC
Confidence 8899999999875
No 22
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=5.6e-33 Score=221.81 Aligned_cols=148 Identities=43% Similarity=0.763 Sum_probs=124.1
Q ss_pred CHHHHHHHHhHhhCCCCCCCccccCCChhHHHHHHhhhcCCC---------CCCCCcccCeeeCCCCEEEeeccccccCC
Q 048149 1 ALKKAHDELDIHVGANRQVNESDIKNLVYLRAILKETMRLYP---------SMEDCTGSGYHVRAGTQHFVNALKVHHDP 71 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~~~~~~~~~~~~l~~~~a~~~E~lRl~~---------~~~~~~~~g~~ip~g~~v~~~~~~~~~~~ 71 (154)
+|+|+++||+++++.+..++++++.+|||++||++|++|++| +.+|++++|+.||+||.|.++.+++|+|+
T Consensus 330 ~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~ 409 (517)
T PLN02687 330 ILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDP 409 (517)
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCc
Confidence 589999999999887778899999999999999999999998 57789999999999999999999999998
Q ss_pred -----------CCcCcC---------CCCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCCc---cChhh
Q 048149 72 -----------KDIDLR---------GQNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDEL---VDMEE 128 (154)
Q Consensus 72 -----------~~~~~~---------~~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~---~~~~~ 128 (154)
+||... ..+..|+|||.|+|+|+|++||.+|+++++|.|+++|++++.++.. .....
T Consensus 410 ~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~ 489 (517)
T PLN02687 410 EQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEE 489 (517)
T ss_pred ccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCccc
Confidence 445321 1234789999999999999999999999999999999999876532 22222
Q ss_pred ccceeeecCCCeEEEEeecC
Q 048149 129 AKSLIITRATPFKALLTPHL 148 (154)
Q Consensus 129 ~~~~~~~~~~~~~v~~~~R~ 148 (154)
...+...+..++++++++|.
T Consensus 490 ~~~~~~~~~~~~~~~~~~R~ 509 (517)
T PLN02687 490 AYGLTLQRAVPLMVHPRPRL 509 (517)
T ss_pred ccceeeecCCCeEEeeccCC
Confidence 33455555667899999885
No 23
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00 E-value=6.6e-33 Score=218.78 Aligned_cols=142 Identities=20% Similarity=0.295 Sum_probs=118.6
Q ss_pred CHHHHHHHHhHhhCC---CCCCCccccCCChhHHHHHHhhhcCCC--------CCCCCcccCeeeCCCCEEEeecccccc
Q 048149 1 ALKKAHDELDIHVGA---NRQVNESDIKNLVYLRAILKETMRLYP--------SMEDCTGSGYHVRAGTQHFVNALKVHH 69 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~---~~~~~~~~~~~l~~~~a~~~E~lRl~~--------~~~~~~~~g~~ip~g~~v~~~~~~~~~ 69 (154)
+|+|+++||+++.+. +..++++++.+|||++||++|++|++| +.+|++++|+.||+|+.|+++.+++|+
T Consensus 297 ~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~r 376 (463)
T PLN02774 297 ALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINY 376 (463)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcC
Confidence 589999999999763 346899999999999999999999999 678999999999999999999999999
Q ss_pred CCCC-----------cCcCC--CCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCCccChhhccceeeec
Q 048149 70 DPKD-----------IDLRG--QNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDELVDMEEAKSLIITR 136 (154)
Q Consensus 70 ~~~~-----------~~~~~--~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~ 136 (154)
||+. |..+. ....|+|||+|+|+|+|++||.+|++++++.|+++|++++.++... . ....+.|
T Consensus 377 dp~~~~dP~~F~PeRfl~~~~~~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~--~--~~~~~~p 452 (463)
T PLN02774 377 DPFLYPDPMTFNPWRWLDKSLESHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKL--M--KFPRVEA 452 (463)
T ss_pred CcccCCChhccCchhcCCCCcCCCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcc--c--cCCCCCC
Confidence 9844 42221 1346899999999999999999999999999999999999775431 1 1123347
Q ss_pred CCCeEEEEee
Q 048149 137 ATPFKALLTP 146 (154)
Q Consensus 137 ~~~~~v~~~~ 146 (154)
+.+++|++++
T Consensus 453 ~~g~~~~~~~ 462 (463)
T PLN02774 453 PNGLHIRVSP 462 (463)
T ss_pred CCCceEEeee
Confidence 7889998874
No 24
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00 E-value=1.2e-32 Score=216.70 Aligned_cols=144 Identities=22% Similarity=0.332 Sum_probs=122.6
Q ss_pred CHHHHHHHHhHhhC----CCCCCCccccCCChhHHHHHHhhhcCCC--------CCCCCcccCeeeCCCCEEEeeccccc
Q 048149 1 ALKKAHDELDIHVG----ANRQVNESDIKNLVYLRAILKETMRLYP--------SMEDCTGSGYHVRAGTQHFVNALKVH 68 (154)
Q Consensus 1 vq~kl~~Ei~~~~~----~~~~~~~~~~~~l~~~~a~~~E~lRl~~--------~~~~~~~~g~~ip~g~~v~~~~~~~~ 68 (154)
+|+|+++||+++++ .+..++++++.+|||++|||+|++|++| +.+|++++||.||+|+.|.++.+++|
T Consensus 284 v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~ 363 (452)
T PLN03141 284 ALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVH 363 (452)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhcc
Confidence 58999999988753 2345789999999999999999999999 67899999999999999999999999
Q ss_pred cCCCCc-----------CcC-CCCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCCccChhhccceeeec
Q 048149 69 HDPKDI-----------DLR-GQNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDELVDMEEAKSLIITR 136 (154)
Q Consensus 69 ~~~~~~-----------~~~-~~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~ 136 (154)
+|++.| ... ..+..|+|||.|+|+|+|++||.+|+++++|.|+++|++++.++... ...++.|
T Consensus 364 ~d~~~~~dP~~F~PeRfl~~~~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~-----~~~~~~~ 438 (452)
T PLN03141 364 LDEENYDNPYQFNPWRWQEKDMNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTIV-----NFPTVRM 438 (452)
T ss_pred CCchhcCCccccCcccccCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCee-----ecccccC
Confidence 998443 221 23568999999999999999999999999999999999998765321 2246678
Q ss_pred CCCeEEEEeecCC
Q 048149 137 ATPFKALLTPHLS 149 (154)
Q Consensus 137 ~~~~~v~~~~R~~ 149 (154)
..++.|.+.+|+.
T Consensus 439 ~~~~~~~~~~~~~ 451 (452)
T PLN03141 439 KRKLPIWVTRIDD 451 (452)
T ss_pred CCCceEEEEeCCC
Confidence 8899999999975
No 25
>PLN02936 epsilon-ring hydroxylase
Probab=99.98 E-value=4.3e-32 Score=215.49 Aligned_cols=147 Identities=33% Similarity=0.546 Sum_probs=123.7
Q ss_pred CHHHHHHHHhHhhCCCCCCCccccCCChhHHHHHHhhhcCCC---------CCCCCcccCeeeCCCCEEEeeccccccCC
Q 048149 1 ALKKAHDELDIHVGANRQVNESDIKNLVYLRAILKETMRLYP---------SMEDCTGSGYHVRAGTQHFVNALKVHHDP 71 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~~~~~~~~~~~~l~~~~a~~~E~lRl~~---------~~~~~~~~g~~ip~g~~v~~~~~~~~~~~ 71 (154)
+|+|+++||+++++. ..++++++.+|||++||++|++|++| +..|+.++|+.||+|+.|+++.+++|+|+
T Consensus 311 ~~~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~ 389 (489)
T PLN02936 311 ALRKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSP 389 (489)
T ss_pred HHHHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCCh
Confidence 589999999999875 45789999999999999999999998 35667779999999999999999999988
Q ss_pred -----------CCcCcCC-------CCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCCccChhhcccee
Q 048149 72 -----------KDIDLRG-------QNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDELVDMEEAKSLI 133 (154)
Q Consensus 72 -----------~~~~~~~-------~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~ 133 (154)
+||..+. .+..|+|||.|+|.|+|++||.++++++++.|+++|++++.++++. ....+.+
T Consensus 390 ~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~--~~~~~~~ 467 (489)
T PLN02936 390 EVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDI--VMTTGAT 467 (489)
T ss_pred hhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCcc--ceecceE
Confidence 5553211 1457999999999999999999999999999999999999875433 2233455
Q ss_pred eecCCCeEEEEeecCCC
Q 048149 134 ITRATPFKALLTPHLSA 150 (154)
Q Consensus 134 ~~~~~~~~v~~~~R~~~ 150 (154)
..|+.+++|++++|...
T Consensus 468 ~~~~~~~~v~~~~R~~~ 484 (489)
T PLN02936 468 IHTTNGLYMTVSRRRVP 484 (489)
T ss_pred EeeCCCeEEEEEeeeCC
Confidence 66888999999998754
No 26
>PLN02966 cytochrome P450 83A1
Probab=99.98 E-value=8e-32 Score=214.48 Aligned_cols=147 Identities=36% Similarity=0.627 Sum_probs=118.9
Q ss_pred CHHHHHHHHhHhhCCC--CCCCccccCCChhHHHHHHhhhcCCC---------CCCCCcccCeeeCCCCEEEeecccccc
Q 048149 1 ALKKAHDELDIHVGAN--RQVNESDIKNLVYLRAILKETMRLYP---------SMEDCTGSGYHVRAGTQHFVNALKVHH 69 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~~--~~~~~~~~~~l~~~~a~~~E~lRl~~---------~~~~~~~~g~~ip~g~~v~~~~~~~~~ 69 (154)
+|+|+++||+++++.+ ..++++++.+|||++||++|++|++| +.+|+.++|+.||+||.|.++.+++|+
T Consensus 322 ~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~r 401 (502)
T PLN02966 322 VLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSR 401 (502)
T ss_pred HHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccC
Confidence 5899999999998742 35799999999999999999999999 568899999999999999999999999
Q ss_pred CCCCc------------CcC-----CCCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCCc---cChhhc
Q 048149 70 DPKDI------------DLR-----GQNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDEL---VDMEEA 129 (154)
Q Consensus 70 ~~~~~------------~~~-----~~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~---~~~~~~ 129 (154)
||+.| ... .....|+|||+|+|+|+|++||.+|+++++|.++++|+|++.++.. .+.+..
T Consensus 402 dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~ 481 (502)
T PLN02966 402 DEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVM 481 (502)
T ss_pred CcccccCChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccc
Confidence 98554 111 1245799999999999999999999999999999999999887642 222334
Q ss_pred cceeeecCCCeEEEEeecCC
Q 048149 130 KSLIITRATPFKALLTPHLS 149 (154)
Q Consensus 130 ~~~~~~~~~~~~v~~~~R~~ 149 (154)
.++...+.. ++++.+|+-
T Consensus 482 ~~~~~~~~~--~~~~~~~~~ 499 (502)
T PLN02966 482 TGLAMHKSQ--HLKLVPEKV 499 (502)
T ss_pred cCeeeccCC--CeEEEEEeC
Confidence 455553333 445665554
No 27
>PLN02196 abscisic acid 8'-hydroxylase
Probab=99.98 E-value=4.8e-32 Score=213.94 Aligned_cols=144 Identities=17% Similarity=0.276 Sum_probs=122.4
Q ss_pred CHHHHHHHHhHhhCC---CCCCCccccCCChhHHHHHHhhhcCCC--------CCCCCcccCeeeCCCCEEEeecccccc
Q 048149 1 ALKKAHDELDIHVGA---NRQVNESDIKNLVYLRAILKETMRLYP--------SMEDCTGSGYHVRAGTQHFVNALKVHH 69 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~---~~~~~~~~~~~l~~~~a~~~E~lRl~~--------~~~~~~~~g~~ip~g~~v~~~~~~~~~ 69 (154)
+|+|+++||+++.+. +..++++++.+++|++||++|++|++| +.+|+.++|+.||+|+.|.++.+++|+
T Consensus 297 vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~r 376 (463)
T PLN02196 297 VLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHH 376 (463)
T ss_pred HHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEeeHHHhcC
Confidence 589999999988763 356899999999999999999999999 678999999999999999999999999
Q ss_pred CCCCc-----------CcCCCCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCCccChhhccceeeecCC
Q 048149 70 DPKDI-----------DLRGQNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDELVDMEEAKSLIITRAT 138 (154)
Q Consensus 70 ~~~~~-----------~~~~~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~ 138 (154)
|++.| .....+..++|||.|+|.|+|+++|.+|++++++.|+++|++++.+++. .. ....+..|+.
T Consensus 377 d~~~~~dP~~F~PeRfl~~~~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~-~~--~~~~~~~p~~ 453 (463)
T PLN02196 377 SADIFSDPGKFDPSRFEVAPKPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSN-GI--QYGPFALPQN 453 (463)
T ss_pred CchhcCCcCccChhhhcCCCCCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCC-ce--EEcccccCCC
Confidence 98544 3333467899999999999999999999999999999999999876532 23 2343456888
Q ss_pred CeEEEEeec
Q 048149 139 PFKALLTPH 147 (154)
Q Consensus 139 ~~~v~~~~R 147 (154)
+++|+++++
T Consensus 454 ~~~~~~~~~ 462 (463)
T PLN02196 454 GLPIALSRK 462 (463)
T ss_pred CceEEEecC
Confidence 999988764
No 28
>PLN02302 ent-kaurenoic acid oxidase
Probab=99.98 E-value=6.1e-32 Score=214.22 Aligned_cols=147 Identities=24% Similarity=0.334 Sum_probs=123.3
Q ss_pred CHHHHHHHHhHhhCCC----CCCCccccCCChhHHHHHHhhhcCCC--------CCCCCcccCeeeCCCCEEEeeccccc
Q 048149 1 ALKKAHDELDIHVGAN----RQVNESDIKNLVYLRAILKETMRLYP--------SMEDCTGSGYHVRAGTQHFVNALKVH 68 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~~----~~~~~~~~~~l~~~~a~~~E~lRl~~--------~~~~~~~~g~~ip~g~~v~~~~~~~~ 68 (154)
+|+|+++|++++++.. ..++++++++|||++||++|++|++| +.+|+.++|+.||+|+.|.++.+++|
T Consensus 320 ~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~ 399 (490)
T PLN02302 320 VLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVH 399 (490)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhc
Confidence 5899999999987642 23789999999999999999999998 67899999999999999999999999
Q ss_pred cCCCCc-----------CcC-CCCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCCccChhhccceeeec
Q 048149 69 HDPKDI-----------DLR-GQNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDELVDMEEAKSLIITR 136 (154)
Q Consensus 69 ~~~~~~-----------~~~-~~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~ 136 (154)
+|++.| ... ..+..++|||.|+|.|+|++||.+|++++++.++++|++++.++.. .+. ......|
T Consensus 400 rd~~~~~dP~~F~PeR~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~--~~~~~~p 476 (490)
T PLN02302 400 MDPEVYPNPKEFDPSRWDNYTPKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGC-KVM--YLPHPRP 476 (490)
T ss_pred CCcccCCCccccChhhcCCCCCCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCC-cce--eCCCCCC
Confidence 998443 211 1356899999999999999999999999999999999999976432 222 2233568
Q ss_pred CCCeEEEEeecCCC
Q 048149 137 ATPFKALLTPHLSA 150 (154)
Q Consensus 137 ~~~~~v~~~~R~~~ 150 (154)
..++.+++++|.++
T Consensus 477 ~~~~~~~~~~~~~~ 490 (490)
T PLN02302 477 KDNCLARITKVASE 490 (490)
T ss_pred CCCceEEEEeccCC
Confidence 88999999999864
No 29
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=99.97 E-value=6.1e-31 Score=208.10 Aligned_cols=146 Identities=21% Similarity=0.332 Sum_probs=123.0
Q ss_pred CHHHHHHHHhHhhC---CCCCCCccccCCChhHHHHHHhhhcCCC--------CCCCCcccCeeeCCCCEEEeecccccc
Q 048149 1 ALKKAHDELDIHVG---ANRQVNESDIKNLVYLRAILKETMRLYP--------SMEDCTGSGYHVRAGTQHFVNALKVHH 69 (154)
Q Consensus 1 vq~kl~~Ei~~~~~---~~~~~~~~~~~~l~~~~a~~~E~lRl~~--------~~~~~~~~g~~ip~g~~v~~~~~~~~~ 69 (154)
+|+|+++|++++.+ .+..++++++.+|||++||++|++|++| +.+|++++|+.||+|+.|.++.+++|+
T Consensus 300 ~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~ 379 (472)
T PLN02987 300 ALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHL 379 (472)
T ss_pred HHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhC
Confidence 58999999998875 2346789999999999999999999998 578999999999999999999999999
Q ss_pred CCC-----------CcCcCC----CCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCCccChhhccceee
Q 048149 70 DPK-----------DIDLRG----QNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDELVDMEEAKSLII 134 (154)
Q Consensus 70 ~~~-----------~~~~~~----~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~ 134 (154)
|++ ||..+. ....++|||+|+|.|+|++||.+|++++++.|+++|++++..+.. .. ...++
T Consensus 380 d~~~~~~p~~F~PeRfl~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~--~~~~~ 455 (472)
T PLN02987 380 DHEYFKDARTFNPWRWQSNSGTTVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDK--LV--FFPTT 455 (472)
T ss_pred CcccCCCccccCcccCCCCCCCCCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCc--ee--ecccc
Confidence 984 342211 235799999999999999999999999999999999999976543 22 23466
Q ss_pred ecCCCeEEEEeecCCC
Q 048149 135 TRATPFKALLTPHLSA 150 (154)
Q Consensus 135 ~~~~~~~v~~~~R~~~ 150 (154)
.|..++.+++++|+-+
T Consensus 456 ~p~~~~~~~~~~r~~~ 471 (472)
T PLN02987 456 RTQKRYPINVKRRDVA 471 (472)
T ss_pred cCCCCceEEEEecccC
Confidence 7888899999999643
No 30
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.96 E-value=3.4e-29 Score=191.19 Aligned_cols=147 Identities=27% Similarity=0.457 Sum_probs=124.6
Q ss_pred CHHHHHHHHhHhhCCCCC-CCccccCCChhHHHHHHhhhcCCC--------CCCCCcccC----eeeCCCCEEEeecccc
Q 048149 1 ALKKAHDELDIHVGANRQ-VNESDIKNLVYLRAILKETMRLYP--------SMEDCTGSG----YHVRAGTQHFVNALKV 67 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~~~~-~~~~~~~~l~~~~a~~~E~lRl~~--------~~~~~~~~g----~~ip~g~~v~~~~~~~ 67 (154)
+++.+++|+.+++|++.. ++++.+++||.++.||+|||||+| +.+|.++.+ |.||+|..|.++....
T Consensus 306 ~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~ 385 (486)
T KOG0684|consen 306 AQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLL 385 (486)
T ss_pred HHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccc
Confidence 478999999999997654 999999999999999999999999 678888865 9999999999999999
Q ss_pred ccCC-----------CCcCcCC---------CCCccccccCCCCCCcchHHHHHHHHHHHHHHHHcCeeeCCCCCccChh
Q 048149 68 HHDP-----------KDIDLRG---------QNFELMPFGSGRRICPGISFAFQVMPLTLASLLRGFDFATPLDELVDME 127 (154)
Q Consensus 68 ~~~~-----------~~~~~~~---------~~~~~~pFg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~ 127 (154)
|+|| +||.+++ -.+.++|||+|.+.|||+.||++|++.+++.+|++||+++.++..+...
T Consensus 386 hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d 465 (486)
T KOG0684|consen 386 HRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVD 465 (486)
T ss_pred cCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCC
Confidence 9999 3443222 1234699999999999999999999999999999999999986433444
Q ss_pred hccceeeecCCCeEEEEeecC
Q 048149 128 EAKSLIITRATPFKALLTPHL 148 (154)
Q Consensus 128 ~~~~~~~~~~~~~~v~~~~R~ 148 (154)
.. .++..|..+++++.+.|.
T Consensus 466 ~s-~~v~~P~g~v~irYK~R~ 485 (486)
T KOG0684|consen 466 YS-RMVMQPEGDVRIRYKRRP 485 (486)
T ss_pred HH-HhhcCCCCCceEEEeecC
Confidence 33 346668889999999986
No 31
>PLN02648 allene oxide synthase
Probab=99.93 E-value=4.8e-26 Score=180.31 Aligned_cols=122 Identities=21% Similarity=0.361 Sum_probs=102.4
Q ss_pred CHHHHHHHHhHhhCC-CCCCCccccCCChhHHHHHHhhhcCCC--------CCCCCccc----CeeeCCCCEEEeecccc
Q 048149 1 ALKKAHDELDIHVGA-NRQVNESDIKNLVYLRAILKETMRLYP--------SMEDCTGS----GYHVRAGTQHFVNALKV 67 (154)
Q Consensus 1 vq~kl~~Ei~~~~~~-~~~~~~~~~~~l~~~~a~~~E~lRl~~--------~~~~~~~~----g~~ip~g~~v~~~~~~~ 67 (154)
+|+||++||+.+++. +..++++++++|||+++|++|++|++| +.+|++++ ||.||+|+.|.++.+++
T Consensus 306 v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~ 385 (480)
T PLN02648 306 LQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKKGEMLFGYQPLV 385 (480)
T ss_pred HHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECCCCEEEEChHHH
Confidence 589999999999863 456899999999999999999999998 46788885 79999999999999999
Q ss_pred ccCCC-----------CcCcC--CCCCccccc---------cCCCCCCcchHHHHHHHHHHHHHHHHcCe-eeCCCCC
Q 048149 68 HHDPK-----------DIDLR--GQNFELMPF---------GSGRRICPGISFAFQVMPLTLASLLRGFD-FATPLDE 122 (154)
Q Consensus 68 ~~~~~-----------~~~~~--~~~~~~~pF---------g~G~r~C~G~~~A~~~~~~~~~~ll~~f~-~~~~~~~ 122 (154)
|+|++ ||..+ .....+++| |+|+|.|+|++||.+|++++++.|+++|+ +++.++.
T Consensus 386 hrdp~~~~dP~~F~PeRf~~~~~~~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~ 463 (480)
T PLN02648 386 TRDPKVFDRPEEFVPDRFMGEEGEKLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDT 463 (480)
T ss_pred hCCcccCCCcceeCCCCCCCCCccccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCc
Confidence 99983 44321 112345555 56779999999999999999999999998 9987654
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.90 E-value=1.1e-23 Score=164.21 Aligned_cols=117 Identities=27% Similarity=0.405 Sum_probs=96.0
Q ss_pred hhHHHHHHhhhcCCC--------CCCCCcccCeeeCCCCEEEeeccccccCCCCc------CcCCCCCccccccCCCCCC
Q 048149 28 VYLRAILKETMRLYP--------SMEDCTGSGYHVRAGTQHFVNALKVHHDPKDI------DLRGQNFELMPFGSGRRIC 93 (154)
Q Consensus 28 ~~~~a~~~E~lRl~~--------~~~~~~~~g~~ip~g~~v~~~~~~~~~~~~~~------~~~~~~~~~~pFg~G~r~C 93 (154)
+|++++++|+||++| +.+|++++|+.||+|+.|.++.++.|+||+.| ++++....++|||+|+|.|
T Consensus 280 ~~~~~~v~E~LR~~ppv~~~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~~~~l~FG~G~H~C 359 (411)
T COG2124 280 PLLEAVVEETLRLYPPVPLARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFNNAHLPFGGGPHRC 359 (411)
T ss_pred HHHHHHHHHHHHhCCchhccceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCCCCCcCCCCCCccc
Confidence 799999999999999 68899999999999999999999999999555 4444458899999999999
Q ss_pred cchHHHHHHHHHHHHHHHHcCeeeCCCCCccChhhccceeeecCCCeEEEEeec
Q 048149 94 PGISFAFQVMPLTLASLLRGFDFATPLDELVDMEEAKSLIITRATPFKALLTPH 147 (154)
Q Consensus 94 ~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R 147 (154)
+|..||++|++++++.++++|++....+ ... .....+..+.....+.++.+
T Consensus 360 lG~~lA~~E~~~~l~~ll~r~~~~~~~~-~~~--~~~~~~~~~~g~~~l~v~~~ 410 (411)
T COG2124 360 LGAALARLELKVALAELLRRFPLLLLAE-PPP--LVRRPTLVPRGGERLPVRRR 410 (411)
T ss_pred cCHHHHHHHHHHHHHHHHHhCchhhcCC-CCC--ccccccccCCCcceeeeecC
Confidence 9999999999999999999999988775 211 22233334555555555543
No 33
>PF12508 DUF3714: Protein of unknown function (DUF3714) ; InterPro: IPR022187 Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=69.75 E-value=3.1 Score=29.71 Aligned_cols=37 Identities=22% Similarity=0.249 Sum_probs=28.5
Q ss_pred CChhHHHHHHhhhcCCC-------CCCCCcccCeeeCCCCEEEe
Q 048149 26 NLVYLRAILKETMRLYP-------SMEDCTGSGYHVRAGTQHFV 62 (154)
Q Consensus 26 ~l~~~~a~~~E~lRl~~-------~~~~~~~~g~~ip~g~~v~~ 62 (154)
.-....|||.|+.-+.. ..+|+.++|..||+||.+.-
T Consensus 51 ~~n~I~A~V~~~qtv~~Gs~vrlRLle~i~i~g~~IPkgt~l~G 94 (200)
T PF12508_consen 51 EKNTIRAVVDGTQTVVDGSRVRLRLLEDIQIGGILIPKGTYLYG 94 (200)
T ss_pred CCCeEEEEEecceEEeCCCEEEEEEcCceEECCEEeCCCCEEEE
Confidence 34556778877765544 58899999999999998765
No 34
>PF09201 SRX: SRX; InterPro: IPR015284 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel. This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=61.96 E-value=8.2 Score=25.85 Aligned_cols=22 Identities=18% Similarity=0.310 Sum_probs=16.3
Q ss_pred CCCcchHHHHHHHHHHHHHHHH
Q 048149 91 RICPGISFAFQVMPLTLASLLR 112 (154)
Q Consensus 91 r~C~G~~~A~~~~~~~~~~ll~ 112 (154)
-+|.|+.||..++-.+++.++.
T Consensus 18 yN~~gKKFsE~QiN~FIs~lIt 39 (148)
T PF09201_consen 18 YNCLGKKFSETQINAFISHLIT 39 (148)
T ss_dssp EETTS----HHHHHHHHHHHHH
T ss_pred ecccchHHHHHHHHHHHHHHhc
Confidence 3899999999999999999976
No 35
>PF14459 Prok-E2_C: Prokaryotic E2 family C
Probab=44.80 E-value=20 Score=23.00 Aligned_cols=20 Identities=30% Similarity=0.537 Sum_probs=16.1
Q ss_pred CCCCccccccCCCCCCcchH
Q 048149 78 GQNFELMPFGSGRRICPGIS 97 (154)
Q Consensus 78 ~~~~~~~pFg~G~r~C~G~~ 97 (154)
+...+.+|||.|.-.|.|..
T Consensus 102 g~gss~~p~GaGaAaC~aAa 121 (131)
T PF14459_consen 102 GCGSSNNPFGAGAAACFAAA 121 (131)
T ss_pred ccCcccCCcCccHHHHHHHH
Confidence 35678899999999998743
No 36
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=42.60 E-value=11 Score=20.84 Aligned_cols=11 Identities=45% Similarity=0.951 Sum_probs=9.0
Q ss_pred ccccCCCCCCc
Q 048149 84 MPFGSGRRICP 94 (154)
Q Consensus 84 ~pFg~G~r~C~ 94 (154)
-+||-|.|.|-
T Consensus 12 ~kfg~GsrsC~ 22 (56)
T KOG3506|consen 12 RKFGQGSRSCR 22 (56)
T ss_pred cccCCCCccee
Confidence 47999999874
No 37
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=42.16 E-value=17 Score=28.98 Aligned_cols=37 Identities=19% Similarity=0.192 Sum_probs=25.9
Q ss_pred ChhHHHHHHhhhcCCC-------CCCCCcccCeeeCCCCEEEee
Q 048149 27 LVYLRAILKETMRLYP-------SMEDCTGSGYHVRAGTQHFVN 63 (154)
Q Consensus 27 l~~~~a~~~E~lRl~~-------~~~~~~~~g~~ip~g~~v~~~ 63 (154)
-....|||.|+.-+.- ..+|+.++|..||+||.+.-.
T Consensus 255 ~n~I~A~V~~~qtv~~G~~vrlRLle~~~v~~~~ipkgt~l~g~ 298 (410)
T TIGR03779 255 RNTIRACVHETQTVVDGSAVKLRLLEPIQAGDLVIPKGTVLYGT 298 (410)
T ss_pred CCceEEEEcCceEEecCCEEEEEEcCceeeCCEEecCCCEEEEE
Confidence 3445566666544332 578999999999999987654
No 38
>PF07886 BA14K: BA14K-like protein; InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process [].
Probab=29.36 E-value=45 Score=16.20 Aligned_cols=17 Identities=24% Similarity=0.599 Sum_probs=13.4
Q ss_pred CCCCccccccCCCCCCc
Q 048149 78 GQNFELMPFGSGRRICP 94 (154)
Q Consensus 78 ~~~~~~~pFg~G~r~C~ 94 (154)
....+|+|+.+..|.|.
T Consensus 15 p~~~Ty~~~~G~r~~C~ 31 (31)
T PF07886_consen 15 PRDNTYQPYDGPRRFCR 31 (31)
T ss_pred CCCCcEeCCCCccccCc
Confidence 35678999998888884
No 39
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and metabolism]
Probab=25.45 E-value=3.3e+02 Score=21.31 Aligned_cols=27 Identities=15% Similarity=0.300 Sum_probs=20.6
Q ss_pred CCCCccccccCCCCCCcchHHHHHHHHHHH
Q 048149 78 GQNFELMPFGSGRRICPGISFAFQVMPLTL 107 (154)
Q Consensus 78 ~~~~~~~pFg~G~r~C~G~~~A~~~~~~~~ 107 (154)
+++++++-||-+ +-+|+++|+ |++.++
T Consensus 325 GspYs~l~~~~p--ms~GrRIA~-EIk~A~ 351 (361)
T COG1759 325 GSPYSNLYWGEP--MSTGRRIAR-EIKEAI 351 (361)
T ss_pred CCcchhhhcCCC--cchhhHHHH-HHHHHH
Confidence 457778888765 779999997 777654
No 40
>PHA03162 hypothetical protein; Provisional
Probab=25.13 E-value=56 Score=21.69 Aligned_cols=24 Identities=21% Similarity=0.468 Sum_probs=19.2
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHH
Q 048149 87 GSGRRICPGISFAFQVMPLTLASL 110 (154)
Q Consensus 87 g~G~r~C~G~~~A~~~~~~~~~~l 110 (154)
++|.+.||++....-++-.=++.|
T Consensus 2 ~~~~k~~pk~~~tmEeLaaeL~kL 25 (135)
T PHA03162 2 AGGSKKCPKAQPTMEDLAAEIAKL 25 (135)
T ss_pred CCCcCCCCccCCCHHHHHHHHHHH
Confidence 468999999999888886666654
No 41
>PTZ00218 40S ribosomal protein S29; Provisional
Probab=24.90 E-value=33 Score=19.06 Aligned_cols=13 Identities=31% Similarity=0.746 Sum_probs=9.8
Q ss_pred cccCCCCCCc--chH
Q 048149 85 PFGSGRRICP--GIS 97 (154)
Q Consensus 85 pFg~G~r~C~--G~~ 97 (154)
-||.|.|.|. |+.
T Consensus 11 ~yGkGsr~C~vCg~~ 25 (54)
T PTZ00218 11 TYGKGSRQCRVCSNR 25 (54)
T ss_pred cCCCCCCeeecCCCc
Confidence 5899999886 553
No 42
>PF02663 FmdE: FmdE, Molybdenum formylmethanofuran dehydrogenase operon ; InterPro: IPR003814 Formylmethanofuran dehydrogenases (1.2.99.5 from EC) is found in methanogenic and sulphate-reducing archaea. The enzyme contains molybdenum or tungsten, a molybdopterin guanine dinuceotide cofactor (MGD) and iron-sulphur clusters []. It catalyses the reversible reduction of CO2 and methanofuran via N-carboxymethanofuran (carbamate) to N-formylmethanofuran, the first and second steps in methanogenesis from CO2 [, ]. This reaction is important for the reduction of CO2 to methane, in autotrophic CO2 fixation, and in CO2 formation from reduced C1 units []. The synthesis of formylmethanofuran is crucial for the energy metabolism of archaea. Methanogenic archaea derives the energy for autrophic growth from the reduction of CO2 with molecular hydrogen as the electron donor []. The process of methanogenesis consists of a series of reduction reactions at which the one-carbon unit derived from CO2 is bound to C1 carriers. There are two isoenzymes of formylmethanofuran dehydrogenase: a tungsten-containing isoenzyme (Fwd) and a molybdenum-containing isoenzyme (Fmd). The tungsten isoenzyme is constitutively transcribed, whereas transcription of the molybdenum operon is induced by molybdate []. The archaea Methanobacterium thermoautotrophicum contains a 4-subunit (FwdA, FwdB, FwdC, FwdD) tungsten formylmethanofuran dehydrogenase and a 3-subunit (FmdA, FmdB, FmdC) molybdenum formylmethanofuran dehydrogenase []. This entry represents subunit E of formylmethanofuran dehydrogenase enyzmes. The enzyme from Methanosarcina barkeri is a molybdenum iron-sulphur protein involved in methanogenesis. Subunit E protein is co-expressed with the enzyme but fails to co-purify and thus its function is unknown [].; PDB: 2GVI_A 3D00_A 2GLZ_A.
Probab=24.79 E-value=71 Score=20.83 Aligned_cols=21 Identities=24% Similarity=0.797 Sum_probs=16.2
Q ss_pred CCCCcchHHHHHHHHHHHHHH
Q 048149 90 RRICPGISFAFQVMPLTLASL 110 (154)
Q Consensus 90 ~r~C~G~~~A~~~~~~~~~~l 110 (154)
.|.|||.-+++.....++..+
T Consensus 4 GH~Cpgl~~G~r~~~~a~~~l 24 (131)
T PF02663_consen 4 GHLCPGLALGYRMAKYALEEL 24 (131)
T ss_dssp SS--HHHHHHHHHHHHHHHHH
T ss_pred CCcCccHHHHHHHHHHHHHHc
Confidence 378999999999988887776
No 43
>PF11138 DUF2911: Protein of unknown function (DUF2911); InterPro: IPR021314 This bacterial family of proteins has no known function.
Probab=24.77 E-value=56 Score=22.12 Aligned_cols=21 Identities=29% Similarity=0.349 Sum_probs=17.4
Q ss_pred CCCCCcccCeeeCCCCEEEee
Q 048149 43 SMEDCTGSGYHVRAGTQHFVN 63 (154)
Q Consensus 43 ~~~~~~~~g~~ip~g~~v~~~ 63 (154)
..+|+.++|..||+|+.-+..
T Consensus 52 f~~dv~igGk~l~AG~Ysl~t 72 (145)
T PF11138_consen 52 FSKDVTIGGKKLKAGTYSLFT 72 (145)
T ss_pred ECCCeEECCEEcCCeeEEEEE
Confidence 478999999999999965543
No 44
>PHA01346 hypothetical protein
Probab=24.34 E-value=74 Score=16.68 Aligned_cols=13 Identities=38% Similarity=0.440 Sum_probs=10.5
Q ss_pred HHHHHHHHhHhhC
Q 048149 2 LKKAHDELDIHVG 14 (154)
Q Consensus 2 q~kl~~Ei~~~~~ 14 (154)
|+|++.|+++.+.
T Consensus 34 qekihaeldsllr 46 (53)
T PHA01346 34 QEKIHAELDSLLR 46 (53)
T ss_pred HHHHHHHHHHHHH
Confidence 7889999887754
No 45
>PF15300 INT_SG_DDX_CT_C: INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=23.89 E-value=43 Score=19.34 Aligned_cols=16 Identities=25% Similarity=0.447 Sum_probs=13.1
Q ss_pred CChhHHHHHHhhhcCC
Q 048149 26 NLVYLRAILKETMRLY 41 (154)
Q Consensus 26 ~l~~~~a~~~E~lRl~ 41 (154)
+..+++.+|+|++|+.
T Consensus 39 r~~fv~~~IkEA~RFk 54 (65)
T PF15300_consen 39 RKQFVEMIIKEAARFK 54 (65)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4568999999999973
No 46
>PF12444 Sox_N: Sox developmental protein N terminal ; InterPro: IPR022151 This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes.
Probab=21.06 E-value=68 Score=19.57 Aligned_cols=19 Identities=16% Similarity=0.440 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHcCeeeCCC
Q 048149 102 VMPLTLASLLRGFDFATPL 120 (154)
Q Consensus 102 ~~~~~~~~ll~~f~~~~~~ 120 (154)
.|.-+++.+|+-|||++++
T Consensus 61 ~IrdAVsqVLkGYDWtLVP 79 (84)
T PF12444_consen 61 CIRDAVSQVLKGYDWTLVP 79 (84)
T ss_pred HHHHHHHHHhccCCceeee
Confidence 5677799999999999875
Done!