BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048150
(146 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 75.9 bits (185), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 9/143 (6%)
Query: 2 YNVVAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFGV-----LPNEHEIAV 56
++V AE++ + + L+ +F ++ A++ FS N LG GGFG L + +AV
Sbjct: 10 FDVPAEEDPEVHLGQLK--RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAV 67
Query: 57 KRLSRSSSQGAQ-EINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLY 115
KRL QG + + EV +++ H NL+RL GFC+ E++LVY Y+ N + + L
Sbjct: 68 KRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR 127
Query: 116 E-PEKQGQWDCSRRYKIIGGRGR 137
E PE Q D +R +I G R
Sbjct: 128 ERPESQPPLDWPKRQRIALGSAR 150
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 9/143 (6%)
Query: 2 YNVVAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFGV-----LPNEHEIAV 56
++V AE++ + + L+ +F ++ A++ F N LG GGFG L + +AV
Sbjct: 2 FDVPAEEDPEVHLGQLK--RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAV 59
Query: 57 KRLSRSSSQGAQ-EINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLY 115
KRL +QG + + EV +++ H NL+RL GFC+ E++LVY Y+ N + + L
Sbjct: 60 KRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR 119
Query: 116 E-PEKQGQWDCSRRYKIIGGRGR 137
E PE Q D +R +I G R
Sbjct: 120 ERPESQPPLDWPKRQRIALGSAR 142
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 10/143 (6%)
Query: 3 NVVAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIAVK 57
N + + + + + ES + +E+ATN F +G G FG VL + ++A+K
Sbjct: 10 NSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK 69
Query: 58 RLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE- 116
R + SSQG +E E+ ++ +H +LV L+GFC ER E IL+Y+Y+ N L LY
Sbjct: 70 RRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS 129
Query: 117 --PEKQGQWDCSRRYKIIGGRGR 137
P W+ +R +I G R
Sbjct: 130 DLPTMSMSWE--QRLEICIGAAR 150
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 10/143 (6%)
Query: 3 NVVAEQNADNDITTLESLQFDFETIEDATNKFSTDNKLGEGGFG-----VLPNEHEIAVK 57
N + + + + + ES + +E+ATN F +G G FG VL + ++A+K
Sbjct: 10 NSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK 69
Query: 58 RLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE- 116
R + SSQG +E E+ ++ +H +LV L+GFC ER E IL+Y+Y+ N L LY
Sbjct: 70 RRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS 129
Query: 117 --PEKQGQWDCSRRYKIIGGRGR 137
P W+ +R +I G R
Sbjct: 130 DLPTMSMSWE--QRLEICIGAAR 150
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 59/103 (57%), Gaps = 14/103 (13%)
Query: 22 FDFETIEDATNKFST------DNKLGEGGFGVL----PNEHEIAVKRLSR----SSSQGA 67
F F +++ TN F NK+GEGGFGV+ N +AVK+L+ ++ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 68 QEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL 110
Q+ + E+ V+AK QH NLV LLGF + ++ LVY Y+PN L
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 117
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 59/103 (57%), Gaps = 14/103 (13%)
Query: 22 FDFETIEDATNKFST------DNKLGEGGFGVL----PNEHEIAVKRLSR----SSSQGA 67
F F +++ TN F NK+GEGGFGV+ N +AVK+L+ ++ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 68 QEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL 110
Q+ + E+ V+AK QH NLV LLGF + ++ LVY Y+PN L
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 117
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 59/103 (57%), Gaps = 14/103 (13%)
Query: 22 FDFETIEDATNKFST------DNKLGEGGFGVL----PNEHEIAVKRLSR----SSSQGA 67
F F +++ TN F NK+GEGGFGV+ N +AVK+L+ ++ +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 68 QEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL 110
Q+ + E+ V+AK QH NLV LLGF + ++ LVY Y+PN L
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 111
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 14/103 (13%)
Query: 22 FDFETIEDATNKFST------DNKLGEGGFGVL----PNEHEIAVKRLSR----SSSQGA 67
F F +++ TN F NK GEGGFGV+ N +AVK+L+ ++ +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 68 QEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL 110
Q+ + E+ V AK QH NLV LLGF + ++ LVY Y PN L
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSL 108
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 39 KLGEGGFG---------VLPNEHE--IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVR 87
+LGEG FG +LP + + +AVK L +S Q+ E ++ LQH ++VR
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 88 LLGFCLEREEKILVYEYVPNKRLDNFL 114
G C E ++V+EY+ + L+ FL
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFL 134
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 39 KLGEGGFG---------VLPNEHE--IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVR 87
+LGEG FG +LP + + +AVK L +S Q+ E ++ LQH ++VR
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 88 LLGFCLEREEKILVYEYVPNKRLDNFL 114
G C E ++V+EY+ + L+ FL
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFL 111
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 39 KLGEGGFG---------VLPNEHE--IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVR 87
+LGEG FG +LP + + +AVK L +S Q+ E ++ LQH ++VR
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 88 LLGFCLEREEKILVYEYVPNKRLDNFL 114
G C E ++V+EY+ + L+ FL
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFL 105
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 39 KLGEGGFG---------VLPNEHEI--AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVR 87
+LGEG FG + P + +I AVK L +S ++ + E ++ LQH ++V+
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 88 LLGFCLEREEKILVYEYVPNKRLDNFL 114
G C+E + I+V+EY+ + L+ FL
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFL 106
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 38 NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
++G G FG++ N+ ++A+K + R + ++ E V+ KL H LV+L G C
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 93 LEREEKILVYEYVPNKRLDNFL 114
LE+ LV+E++ + L ++L
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYL 96
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 38 NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
++G G FG++ N+ ++A+K + R + ++ E V+ KL H LV+L G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 93 LEREEKILVYEYVPNKRLDNFL 114
LE+ LV+E++ + L ++L
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYL 93
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 38 NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
++G G FG++ N+ ++A+K + R + ++ E V+ KL H LV+L G C
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 93 LEREEKILVYEYVPNKRLDNFL 114
LE+ LV+E++ + L ++L
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYL 91
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 38 NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
++G G FG++ N+ ++A+K + R + ++ E V+ KL H LV+L G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 93 LEREEKILVYEYVPNKRLDNFL 114
LE+ LV+E++ + L ++L
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYL 93
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 29 DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
DATN S D +G G FG LP++ EI A+K L ++ + + E ++
Sbjct: 31 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 89
Query: 79 KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ H N++RL G + + ++V EY+ N LD+FL + + Q
Sbjct: 90 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 131
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 29 DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
DATN S D +G G FG LP++ EI A+K L ++ + + E ++
Sbjct: 43 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 79 KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ H N++RL G + + ++V EY+ N LD+FL + + Q
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 29 DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
DATN S D +G G FG LP++ EI A+K L ++ + + E ++
Sbjct: 43 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 79 KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ H N++RL G + + ++V EY+ N LD+FL + + Q
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 29 DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
DATN S D +G G FG LP++ EI A+K L ++ + + E ++
Sbjct: 14 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
Query: 79 KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ H N++RL G + + ++V EY+ N LD+FL + + Q
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 114
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 29 DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
DATN S D +G G FG LP++ EI A+K L ++ + + E ++
Sbjct: 43 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 79 KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ H N++RL G + + ++V EY+ N LD+FL + + Q
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 29 DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
DATN S D +G G FG LP++ EI A+K L ++ + + E ++
Sbjct: 43 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 79 KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ H N++RL G + + ++V EY+ N LD+FL + + Q
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 29 DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
DATN S D +G G FG LP++ EI A+K L ++ + + E ++
Sbjct: 43 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 79 KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ H N++RL G + + ++V EY+ N LD+FL + + Q
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 29 DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
DATN S D +G G FG LP++ EI A+K L ++ + + E ++
Sbjct: 43 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 79 KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ H N++RL G + + ++V EY+ N LD+FL + + Q
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 29 DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
DATN S D +G G FG LP++ EI A+K L ++ + + E ++
Sbjct: 43 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 79 KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ H N++RL G + + ++V EY+ N LD+FL + + Q
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 29 DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
DATN S D +G G FG LP++ EI A+K L ++ + + E ++
Sbjct: 41 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 99
Query: 79 KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ H N++RL G + + ++V EY+ N LD+FL + + Q
Sbjct: 100 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 141
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 38 NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
++G G FG++ N+ ++A+K + + S + E V+ KL H LV+L G C
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 93 LEREEKILVYEYVPNKRLDNFL 114
LE+ LV+E++ + L ++L
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYL 113
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGA-------QEINNEVVV 76
A N+ + ++G+GGFG++ ++ +A+K L S+G QE EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 77 VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRR 128
++ L H N+V+L G L +V E+VP L + L + +W R
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLR 126
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGA-------QEINNEVVV 76
A N+ + ++G+GGFG++ ++ +A+K L S+G QE EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 77 VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRR 128
++ L H N+V+L G L +V E+VP L + L + +W R
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLR 126
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGA-------QEINNEVVV 76
A N+ + ++G+GGFG++ ++ +A+K L S+G QE EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 77 VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRR 128
++ L H N+V+L G L +V E+VP L + L + +W R
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLR 126
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 38 NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
++G G FG++ N+ ++A+K + R + ++ E V+ KL H LV+L G C
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 93 LEREEKILVYEYVPNKRLDNFL 114
LE+ LV E++ + L ++L
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYL 94
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 38 NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
+LG G FGV+ ++++A+K + + S E E V+ L H LV+L G C
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 93 LEREEKILVYEYVPNKRLDNFLYE 116
++ ++ EY+ N L N+L E
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLRE 103
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 38 NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
+LG G FGV+ ++++A+K + + S E E V+ L H LV+L G C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 93 LEREEKILVYEYVPNKRLDNFLYE 116
++ ++ EY+ N L N+L E
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLRE 112
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 38 NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
+LG G FGV+ ++++A+K + + S E E V+ L H LV+L G C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 93 LEREEKILVYEYVPNKRLDNFLYE 116
++ ++ EY+ N L N+L E
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLRE 97
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 38 NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
+LG G FGV+ ++++A+K + + S E E V+ L H LV+L G C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 93 LEREEKILVYEYVPNKRLDNFLYE 116
++ ++ EY+ N L N+L E
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLRE 97
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 38 NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
+LG G FGV+ ++++A+K + + S E E V+ L H LV+L G C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 93 LEREEKILVYEYVPNKRLDNFLYE 116
++ ++ EY+ N L N+L E
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLRE 112
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 38 NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
+LG G FGV+ ++++A+K + + S E E V+ L H LV+L G C
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 93 LEREEKILVYEYVPNKRLDNFLYE 116
++ ++ EY+ N L N+L E
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLRE 96
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 38 NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
+LG G FGV+ ++++A+K + + S E E V+ L H LV+L G C
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 93 LEREEKILVYEYVPNKRLDNFLYE 116
++ ++ EY+ N L N+L E
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLRE 92
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 12/87 (13%)
Query: 40 LGEGGFG---------VLPNEH--EIAVKRLSRSSSQGAQ-EINNEVVVVAKLQHINLVR 87
+GEG FG +LP E +AVK L +S Q + E ++A+ + N+V+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 88 LLGFCLEREEKILVYEYVPNKRLDNFL 114
LLG C + L++EY+ L+ FL
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFL 141
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 39 KLGEGGFG---------VLPNEHE--IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVR 87
+LGEG FG + P + + +AVK L + ++ E ++ LQH ++V+
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 88 LLGFCLEREEKILVYEYVPNKRLDNFL 114
G C + + I+V+EY+ + L+ FL
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFL 108
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 38 NKLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
+LG G FGV+ ++++AVK + + S E E + KL H LV+ G C
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 93 LEREEKILVYEYVPNKRLDNFL 114
+ +V EY+ N L N+L
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYL 94
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 29 DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
DATN S D +G G FG LP++ EI A+K L ++ + + E ++
Sbjct: 14 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
Query: 79 KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ H N++RL G + + ++V E + N LD+FL + + Q
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ 114
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 29 DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
DATN S D +G G FG LP++ EI A+K L ++ + + E ++
Sbjct: 43 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 79 KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ H N++RL G + + ++V E + N LD+FL + + Q
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ 143
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 29 DATNKFSTDNKLGEGGFG-------VLPNEHEI--AVKRLSRSSSQGAQ-EINNEVVVVA 78
DATN S D +G G FG LP++ EI A+K L ++ + + E ++
Sbjct: 43 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 79 KLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ H N++RL G + + ++V E + N LD+FL + + Q
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ 143
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39 KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
+LG+G FG + N E+ AVK+L S+ + ++ E+ ++ LQH N+V+
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 89 LGFCLE--REEKILVYEYVPNKRLDNFL 114
G C R L+ EY+P L ++L
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYL 111
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39 KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
+LG+G FG + N E+ AVK+L S+ + ++ E+ ++ LQH N+V+
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 89 LGFCLE--REEKILVYEYVPNKRLDNFL 114
G C R L+ EY+P L ++L
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYL 109
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39 KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
+LG+G FG + N E+ AVK+L S+ + ++ E+ ++ LQH N+V+
Sbjct: 48 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 89 LGFCLE--REEKILVYEYVPNKRLDNFL 114
G C R L+ EY+P L ++L
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYL 135
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39 KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
+LG+G FG + N E+ AVK+L S+ + ++ E+ ++ LQH N+V+
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 89 LGFCLE--REEKILVYEYVPNKRLDNFL 114
G C R L+ EY+P L ++L
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYL 105
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39 KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
+LG+G FG + N E+ AVK+L S+ + ++ E+ ++ LQH N+V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 89 LGFCLE--REEKILVYEYVPNKRLDNFL 114
G C R L+ EY+P L ++L
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL 104
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39 KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
+LG+G FG + N E+ AVK+L S+ + ++ E+ ++ LQH N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 89 LGFCLE--REEKILVYEYVPNKRLDNFL 114
G C R L+ EY+P L ++L
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYL 107
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39 KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
+LG+G FG + N E+ AVK+L S+ + ++ E+ ++ LQH N+V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 89 LGFCLE--REEKILVYEYVPNKRLDNFL 114
G C R L+ EY+P L ++L
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL 104
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39 KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
+LG+G FG + N E+ AVK+L S+ + ++ E+ ++ LQH N+V+
Sbjct: 23 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 89 LGFCLE--REEKILVYEYVPNKRLDNFL 114
G C R L+ EY+P L ++L
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYL 110
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39 KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
+LG+G FG + N E+ AVK+L S+ + ++ E+ ++ LQH N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 89 LGFCLE--REEKILVYEYVPNKRLDNFL 114
G C R L+ EY+P L ++L
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYL 107
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39 KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
+LG+G FG + N E+ AVK+L S+ + ++ E+ ++ LQH N+V+
Sbjct: 15 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 89 LGFCLE--REEKILVYEYVPNKRLDNFL 114
G C R L+ EY+P L ++L
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYL 102
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39 KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
+LG+G FG + N E+ AVK+L S+ + ++ E+ ++ LQH N+V+
Sbjct: 21 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 89 LGFCLE--REEKILVYEYVPNKRLDNFL 114
G C R L+ EY+P L ++L
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYL 108
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39 KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
+LG+G FG + N E+ AVK+L S+ + ++ E+ ++ LQH N+V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 89 LGFCLE--REEKILVYEYVPNKRLDNFL 114
G C R L+ EY+P L ++L
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL 104
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39 KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
+LG+G FG + N E+ AVK+L S+ + ++ E+ ++ LQH N+V+
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 89 LGFCLE--REEKILVYEYVPNKRLDNFL 114
G C R L+ EY+P L ++L
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYL 103
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 10/132 (7%)
Query: 10 ADNDITTLESLQF----DFETIEDATNKFSTDNKLGEGGFGVLPNEH----EIAVKRLSR 61
+D DI T E+L F D + ++ + K+G G FG + ++AVK L
Sbjct: 11 SDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILME 70
Query: 62 SS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEK 119
++ E EV ++ +L+H N+V +G + +V EY+ L L++
Sbjct: 71 QDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA 130
Query: 120 QGQWDCSRRYKI 131
+ Q D RR +
Sbjct: 131 REQLDERRRLSM 142
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 35 STDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
+ +KLG G +G + +AVK L + + +E E V+ +++H NLV+L
Sbjct: 35 TMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQL 93
Query: 89 LGFCLEREEKILVYEYVPNKRLDNFLYE 116
LG C +V EY+P L ++L E
Sbjct: 94 LGVCTLEPPFYIVTEYMPYGNLLDYLRE 121
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39 KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
+LG+G FG + N E+ AVK+L S+ + ++ E+ ++ LQH N+V+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 89 LGFCLE--REEKILVYEYVPNKRLDNFL 114
G C R L+ EY+P L ++L
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYL 122
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 10/132 (7%)
Query: 10 ADNDITTLESLQF----DFETIEDATNKFSTDNKLGEGGFGVLPNEH----EIAVKRLSR 61
+D DI T E+L F D + ++ + K+G G FG + ++AVK L
Sbjct: 11 SDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILME 70
Query: 62 SS--SQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEK 119
++ E EV ++ +L+H N+V +G + +V EY+ L L++
Sbjct: 71 QDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA 130
Query: 120 QGQWDCSRRYKI 131
+ Q D RR +
Sbjct: 131 REQLDERRRLSM 142
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 39 KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
+LG+G FG + N E+ AVK+L S+ + ++ E+ ++ LQH N+V+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 89 LGFCLE--REEKILVYEYVPNKRLDNFL 114
G C R L+ EY+P L ++L
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYL 122
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 40 LGEGGFGVL-----------PNEHEIAVKRLSR-SSSQGAQEINNEVVVVAKLQHINLVR 87
LG G FG + P+ ++AVK L S Q + E ++++KL H N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 88 LLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+G L+ + ++ E + L +FL E
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRE 127
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 40 LGEGGFGVL-----------PNEHEIAVKRLSR-SSSQGAQEINNEVVVVAKLQHINLVR 87
LG G FG + P+ ++AVK L S Q + E ++++KL H N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 88 LLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+G L+ + ++ E + L +FL E
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRE 141
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 40 LGEGGFGVL------PN----EHEIAVKRLSRSSSQGAQ-EINNEVVVVAKLQHINLVRL 88
LG G FG + P + +A+K L+ ++ A E +E +++A + H +LVRL
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 89 LGFCLEREEKILVYEYVPNKRLDNFLYE 116
LG CL + LV + +P+ L +++E
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHE 132
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 40 LGEGGFGVL------PN----EHEIAVKRLSRSSSQGAQ-EINNEVVVVAKLQHINLVRL 88
LG G FG + P + +A+K L+ ++ A E +E +++A + H +LVRL
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 89 LGFCLEREEKILVYEYVPNKRLDNFLYE 116
LG CL + LV + +P+ L +++E
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCLLEYVHE 109
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 17/141 (12%)
Query: 1 KYNVVAEQNADNDITTLESLQFDFE-TIEDATNKFSTDNKLGEGGFGVLPNE-------- 51
++ VV E N +N + ++ Q ++ E N+ S LG G FG +
Sbjct: 8 QWKVVEEINGNNXVX-IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS 66
Query: 52 ---HEIAVKRLSRSSSQGAQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVP 106
+AVK L S+ +E + +E+ V++ L H+N+V LLG C +++ EY
Sbjct: 67 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 126
Query: 107 NKRLDNFLYEPEKQGQWDCSR 127
L NFL K+ + CS+
Sbjct: 127 YGDLLNFLR--RKRDSFICSK 145
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 20 LQFDFETIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNE 73
L++D+E E+ LG+G +G+ L N+ IA+K + S+ +Q ++ E
Sbjct: 15 LEYDYEYDENGDRVV-----LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEE 69
Query: 74 VVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+ + L+H N+V+ LG E + E VP L L
Sbjct: 70 IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALL 110
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 32 NKFSTDNKLGEGGFGVLPNEH--------EIAVKRLSRSSSQG-AQEINNEVVVVAKL-Q 81
N + +GEG FG + + A+KR+ +S+ ++ E+ V+ KL
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 82 HINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
H N++ LLG C R L EY P+ L +FL
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 107
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 32 NKFSTDNKLGEGGFGVLPNEH--------EIAVKRLSRSSSQG-AQEINNEVVVVAKL-Q 81
N + +GEG FG + + A+KR+ +S+ ++ E+ V+ KL
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 82 HINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
H N++ LLG C R L EY P+ L +FL
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 117
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 20 LQFDFETIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEINNE 73
L++D+E E+ LG+G +G+ L N+ IA+K + S+ +Q ++ E
Sbjct: 1 LEYDYEYDENGDRVV-----LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEE 55
Query: 74 VVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+ + L+H N+V+ LG E + E VP L L
Sbjct: 56 IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALL 96
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 40 LGEGGFGVL-----------PNEHEIAVKRLSR-SSSQGAQEINNEVVVVAKLQHINLVR 87
LG G FG + P+ ++AVK L S Q + E ++++K H N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 88 LLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+G L+ + ++ E + L +FL E
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRE 141
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 40 LGEGGFGVL-----------PNEHEIAVKRLSR-SSSQGAQEINNEVVVVAKLQHINLVR 87
LG G FG + P+ ++AVK L S Q + E ++++K H N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 88 LLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+G L+ + ++ E + L +FL E
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRE 127
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 28 EDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQG---AQEINNEVVVVA 78
+D FS ++G G FG + N +A+K++S S Q Q+I EV +
Sbjct: 50 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 109
Query: 79 KLQHINLVRLLGFCLEREEKILVYEY 104
KL+H N ++ G L LV EY
Sbjct: 110 KLRHPNTIQYRGCYLREHTAWLVMEY 135
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 40 LGEGGFGVL-----------PNEHEIAVKRLSR-SSSQGAQEINNEVVVVAKLQHINLVR 87
LG G FG + P+ ++AVK L S Q + E ++++K H N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 88 LLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+G L+ + ++ E + L +FL E
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRE 127
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 28 EDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQG---AQEINNEVVVVA 78
+D FS ++G G FG + N +A+K++S S Q Q+I EV +
Sbjct: 11 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70
Query: 79 KLQHINLVRLLGFCLEREEKILVYEY 104
KL+H N ++ G L LV EY
Sbjct: 71 KLRHPNTIQYRGCYLREHTAWLVMEY 96
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 40 LGEGGFGVL-----------PNEHEIAVKRLSR-SSSQGAQEINNEVVVVAKLQHINLVR 87
LG G FG + P+ ++AVK L S Q + E ++++K H N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 88 LLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+G L+ + ++ E + L +FL E
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRE 126
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 40 LGEGGFGVL-----------PNEHEIAVKRLSR-SSSQGAQEINNEVVVVAKLQHINLVR 87
LG G FG + P+ ++AVK L S Q + E ++++K H N+VR
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 88 LLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+G L+ + ++ E + L +FL E
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRE 118
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 40 LGEGGFGVL-----------PNEHEIAVKRLSR-SSSQGAQEINNEVVVVAKLQHINLVR 87
LG G FG + P+ ++AVK L S Q + E ++++K H N+VR
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 88 LLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+G L+ + ++ E + L +FL E
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRE 167
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 40 LGEGGFGVL-----------PNEHEIAVKRLSR-SSSQGAQEINNEVVVVAKLQHINLVR 87
LG G FG + P+ ++AVK L S Q + E ++++K H N+VR
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 88 LLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+G L+ + ++ E + L +FL E
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRE 133
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 40 LGEGGFGVL-----------PNEHEIAVKRLSR-SSSQGAQEINNEVVVVAKLQHINLVR 87
LG G FG + P+ ++AVK L S Q + E ++++K H N+VR
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 88 LLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+G L+ + ++ E + L +FL E
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRE 144
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 40 LGEGGFGVL-----------PNEHEIAVKRLSR-SSSQGAQEINNEVVVVAKLQHINLVR 87
LG G FG + P+ ++AVK L S Q + E ++++K H N+VR
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 88 LLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+G L+ + ++ E + L +FL E
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRE 143
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 32 NKFSTDNKLGEGGFGVLPNEH--------EIAVKRLSRSSSQG-AQEINNEVVVVAKL-Q 81
N + +GEG FG + + A+KR+ +S+ ++ E+ V+ KL
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 82 HINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
H N++ LLG C R L EY P+ L +FL
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 114
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 40 LGEGGFGVL-----------PNEHEIAVKRLSR-SSSQGAQEINNEVVVVAKLQHINLVR 87
LG G FG + P+ ++AVK L S Q + E ++++K H N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 88 LLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+G L+ + ++ E + L +FL E
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRE 126
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 17/141 (12%)
Query: 1 KYNVVAEQNADNDITTLESLQFDFE-TIEDATNKFSTDNKLGEGGFGVLPNE-------- 51
++ VV E N +N + ++ Q ++ E N+ S LG G FG +
Sbjct: 15 QWKVVEEINGNNYVY-IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS 73
Query: 52 ---HEIAVKRLSRSSSQGAQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVP 106
+AVK L S+ +E + +E+ V++ L H+N+V LLG C +++ EY
Sbjct: 74 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 133
Query: 107 NKRLDNFLYEPEKQGQWDCSR 127
L NFL K+ + CS+
Sbjct: 134 YGDLLNFLR--RKRDSFICSK 152
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 39 KLGEGGFGVLP---------NEHEI-AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
+LG+G FG + N E+ AVK+L S+ + ++ E+ ++ LQH N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 89 LGFCLE--REEKILVYEYVPNKRLDNFL 114
G C R L+ E++P L +L
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYL 107
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 17/141 (12%)
Query: 1 KYNVVAEQNADNDITTLESLQFDFE-TIEDATNKFSTDNKLGEGGFGVLPNE-------- 51
++ VV E N +N + ++ Q ++ E N+ S LG G FG +
Sbjct: 15 QWKVVEEINGNNYVY-IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS 73
Query: 52 ---HEIAVKRLSRSSSQGAQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVP 106
+AVK L S+ +E + +E+ V++ L H+N+V LLG C +++ EY
Sbjct: 74 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 133
Query: 107 NKRLDNFLYEPEKQGQWDCSR 127
L NFL K+ + CS+
Sbjct: 134 YGDLLNFLR--RKRDSFICSK 152
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 40 LGEGGFGVL-----------PNEHEIAVKRLSR-SSSQGAQEINNEVVVVAKLQHINLVR 87
LG G FG + P+ ++AVK L S Q + E ++++K H N+VR
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 88 LLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+G L+ + ++ E + L +FL E
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRE 153
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 17/141 (12%)
Query: 1 KYNVVAEQNADNDITTLESLQFDFE-TIEDATNKFSTDNKLGEGGFGVLPNE-------- 51
++ VV E N +N + ++ Q ++ E N+ S LG G FG +
Sbjct: 10 QWKVVEEINGNNYVY-IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS 68
Query: 52 ---HEIAVKRLSRSSSQGAQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVP 106
+AVK L S+ +E + +E+ V++ L H+N+V LLG C +++ EY
Sbjct: 69 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 128
Query: 107 NKRLDNFLYEPEKQGQWDCSR 127
L NFL K+ + CS+
Sbjct: 129 YGDLLNFLR--RKRDSFICSK 147
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPNEHEIAV----------KRLSRSSSQGA--QEINNEVV 75
E+ + + T +LG G F V+ E + KR ++SS +G ++I EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPE 118
++ ++QH N++ L + + IL+ E V L +FL E E
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 109
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPNEHEIAV----------KRLSRSSSQGA--QEINNEVV 75
E+ + + T +LG G F V+ E + KR ++SS +G ++I EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPE 118
++ ++QH N++ L + + IL+ E V L +FL E E
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 109
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPNEHEIAV----------KRLSRSSSQGA--QEINNEVV 75
E+ + + T +LG G F V+ E + KR ++SS +G ++I EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPE 118
++ ++QH N++ L + + IL+ E V L +FL E E
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 109
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 18/121 (14%)
Query: 19 SLQFD-FETIEDATNKFSTDN-----KLGEGGFGVL-----------PNEHEIAVKRLSR 61
SL D F+ +ED +F N LGEG FG + +AVK L
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 62 SSSQG-AQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
++S +++ +E V+ ++ H ++++L G C + +L+ EY L FL E K
Sbjct: 64 NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
Query: 121 G 121
G
Sbjct: 124 G 124
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 18/121 (14%)
Query: 19 SLQFD-FETIEDATNKFSTDN-----KLGEGGFGVL-----------PNEHEIAVKRLSR 61
SL D F+ +ED +F N LGEG FG + +AVK L
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 62 SSSQG-AQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
++S +++ +E V+ ++ H ++++L G C + +L+ EY L FL E K
Sbjct: 64 NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
Query: 121 G 121
G
Sbjct: 124 G 124
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 18/121 (14%)
Query: 19 SLQFD-FETIEDATNKFSTDN-----KLGEGGFGVL-----------PNEHEIAVKRLSR 61
SL D F+ +ED +F N LGEG FG + +AVK L
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 62 SSSQG-AQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
++S +++ +E V+ ++ H ++++L G C + +L+ EY L FL E K
Sbjct: 64 NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
Query: 121 G 121
G
Sbjct: 124 G 124
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPNEHEIAV----------KRLSRSSSQGA--QEINNEVV 75
E+ + + T +LG G F V+ E + KR ++SS +G ++I EV
Sbjct: 7 ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPE 118
++ ++QH N++ L + + IL+ E V L +FL E E
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 109
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPNEHEIAV----------KRLSRSSSQGA--QEINNEVV 75
E+ + + T +LG G F V+ E + KR ++SS +G ++I EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPE 118
++ ++QH N++ L + + IL+ E V L +FL E E
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 109
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 15 TTLESLQFDFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQ 68
T+++ +++ E + +KLG G +G + +AVK L + + +
Sbjct: 1 TSMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VE 59
Query: 69 EINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
E E V+ +++H NLV+LLG C ++ E++ L ++L E +Q
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ 111
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPNEHEIAV----------KRLSRSSSQGA--QEINNEVV 75
E+ + + T +LG G F V+ E + KR ++SS +G ++I EV
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPE 118
++ ++QH N++ L + + IL+ E V L +FL E E
Sbjct: 66 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 108
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPNEHEIAV----------KRLSRSSSQGA--QEINNEVV 75
E+ + + T +LG G F V+ E + KR ++SS +G ++I EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPE 118
++ ++QH N++ L + + IL+ E V L +FL E E
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 109
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPNEHEIAV----------KRLSRSSSQGA--QEINNEVV 75
E+ + + T +LG G F V+ E + KR ++SS +G ++I EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPE 118
++ ++QH N++ L + + IL+ E V L +FL E E
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 109
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 40 LGEGGFGVL-----------PNEHEIAVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVR 87
LG G FG + P+ ++AVK L S Q + E ++++K H N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 88 LLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+G L+ + ++ E + L +FL E
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRE 141
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 15 TTLESLQFDFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQ 68
T+++ +++ E + +KLG G +G + +AVK L + + +
Sbjct: 1 TSMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VE 59
Query: 69 EINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
E E V+ +++H NLV+LLG C ++ E++ L ++L E +Q
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 111
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 30 ATNKFSTDNK---LGEGGFGVLPNEHE------IAVKRLSRSSSQGAQEINNEVVVVAKL 80
A N F T +K LG G FG + E +A K + + +E+ NE+ V+ +L
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 81 QHINLVRLLGFCLEREEKILVYEYV 105
H NL++L + + +LV EYV
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYV 168
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPNEHEIAV----------KRLSRSSSQGA--QEINNEVV 75
E+ + + T +LG G F V+ E + KR ++SS +G ++I EV
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPE 118
++ ++QH N++ L + + IL+ E V L +FL E E
Sbjct: 66 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 108
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPNEHEIAV----------KRLSRSSSQGA--QEINNEVV 75
E+ + + T +LG G F V+ E + KR ++SS +G ++I EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPE 118
++ ++QH N++ L + + IL+ E V L +FL E E
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 109
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPNEHEIAV----------KRLSRSSSQGA--QEINNEVV 75
E+ + + T +LG G F V+ E + KR ++SS +G ++I EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKII 132
++ ++QH N++ L + + IL+ E V L +FL E E + + + K I
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPNEHEIAV----------KRLSRSSSQGA--QEINNEVV 75
E+ + + T +LG G F V+ E + KR ++SS +G ++I EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPE 118
++ ++QH N++ L + + IL+ E V L +FL E E
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 109
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 35 STDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
+ +KLG G FG + +AVK L + + +E E V+ +++H NLV+L
Sbjct: 14 TMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQL 72
Query: 89 LGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
LG C ++ E++ L ++L E +Q
Sbjct: 73 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 104
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 37.0 bits (84), Expect = 0.004, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 16 TLESLQFDFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQE 69
T+ + +++ E + +KLG G +G + +AVK L + + +E
Sbjct: 204 TIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEE 262
Query: 70 INNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
E V+ +++H NLV+LLG C ++ E++ L ++L E +Q
Sbjct: 263 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 313
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPNEHEIAV----------KRLSRSSSQGA--QEINNEVV 75
E+ + + T +LG G F V+ E + KR ++SS +G ++I EV
Sbjct: 7 ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPE 118
++ ++QH N++ L + + IL+ E V L +FL E E
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE 109
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQG 66
E L +D E A + LG G FG + P +AVK L ++
Sbjct: 13 ERLPYDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATAS 72
Query: 67 A-QEINNEVVVVAKL-QHINLVRLLGFCLEREEKILV-YEYVPNKRLDNFL 114
+ + E+ ++ + H+N+V LLG C ++ ++V EY L N+L
Sbjct: 73 EYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 45 FGVLPNEH--EIAVKRLSRSSSQGA--QEINNEVVVVAKLQHINLVRLLGFCLEREEKIL 100
FG P E +A+K L + ++G +E +E ++ A+LQH N+V LLG + + +
Sbjct: 31 FGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 89
Query: 101 VYEYVPNKRLDNFL 114
++ Y + L FL
Sbjct: 90 IFSYCSHGDLHEFL 103
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 36.6 bits (83), Expect = 0.006, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 16 TLESLQFDFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQE 69
T+ + +++ E + +KLG G +G + +AVK L + + +E
Sbjct: 243 TVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEE 301
Query: 70 INNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
E V+ +++H NLV+LLG C ++ E++ L ++L E +Q
Sbjct: 302 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 352
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPNEHEIAV----------KRLSRSSSQGA--QEINNEVV 75
E+ + + T +LG G F V+ E + KR ++SS +G ++I EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPE 118
++ ++QH N++ L + + IL+ E V L +FL E E
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKE 109
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 43 GGFGVLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY 102
G +G L +E E+ +K L ++ ++ +++KL H +LV G C+ +E ILV
Sbjct: 33 GDYGQL-HETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQ 91
Query: 103 EYVPNKRLDNFL 114
E+V LD +L
Sbjct: 92 EFVKFGSLDTYL 103
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 43 GGFGVLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVY 102
G +G L +E E+ +K L ++ ++ +++KL H +LV G C +E ILV
Sbjct: 33 GDYGQL-HETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQ 91
Query: 103 EYVPNKRLDNFL 114
E+V LD +L
Sbjct: 92 EFVKFGSLDTYL 103
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 36.2 bits (82), Expect = 0.006, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 16 TLESLQFDFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQE 69
T+ + +++ E + +KLG G +G + +AVK L + + +E
Sbjct: 201 TVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEE 259
Query: 70 INNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
E V+ +++H NLV+LLG C ++ E++ L ++L E +Q
Sbjct: 260 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 310
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 45 FGVLPNEH--EIAVKRLSRSSSQGA--QEINNEVVVVAKLQHINLVRLLGFCLEREEKIL 100
FG P E +A+K L + ++G +E +E ++ A+LQH N+V LLG + + +
Sbjct: 48 FGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106
Query: 101 VYEYVPNKRLDNFL 114
++ Y + L FL
Sbjct: 107 IFSYCSHGDLHEFL 120
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 23 DFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVV 76
+++ E + +KLG G +G + +AVK L + + +E E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 77 VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ +++H NLV+LLG C ++ E++ L ++L E +Q
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ 106
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 17/131 (12%)
Query: 1 KYNV---VAEQNADNDITTLESLQFDF-ETIEDATNKFSTDNKLGEGGFGVLPNEH---- 52
KY V + E N T ++ Q + E E N LG G FG +
Sbjct: 11 KYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGL 70
Query: 53 -------EIAVKRLSRSSSQGAQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILVYE 103
++AVK L ++ +E + +E+ +++ L QH N+V LLG C +++ E
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 104 YVPNKRLDNFL 114
Y L NFL
Sbjct: 131 YCCYGDLLNFL 141
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 17/131 (12%)
Query: 1 KYNV---VAEQNADNDITTLESLQFDF-ETIEDATNKFSTDNKLGEGGFGVLPNEH---- 52
KY V + E N T ++ Q + E E N LG G FG +
Sbjct: 11 KYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGL 70
Query: 53 -------EIAVKRLSRSSSQGAQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILVYE 103
++AVK L ++ +E + +E+ +++ L QH N+V LLG C +++ E
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 104 YVPNKRLDNFL 114
Y L NFL
Sbjct: 131 YCCYGDLLNFL 141
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 17/131 (12%)
Query: 1 KYNV---VAEQNADNDITTLESLQFDF-ETIEDATNKFSTDNKLGEGGFGVLPNEH---- 52
KY V + E N T ++ Q + E E N LG G FG +
Sbjct: 11 KYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGL 70
Query: 53 -------EIAVKRLSRSSSQGAQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILVYE 103
++AVK L ++ +E + +E+ +++ L QH N+V LLG C +++ E
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 104 YVPNKRLDNFL 114
Y L NFL
Sbjct: 131 YCCYGDLLNFL 141
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 17/131 (12%)
Query: 1 KYNV---VAEQNADNDITTLESLQFDF-ETIEDATNKFSTDNKLGEGGFGVLPNEH---- 52
KY V + E N T ++ Q + E E N LG G FG +
Sbjct: 3 KYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGL 62
Query: 53 -------EIAVKRLSRSSSQGAQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILVYE 103
++AVK L ++ +E + +E+ +++ L QH N+V LLG C +++ E
Sbjct: 63 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 122
Query: 104 YVPNKRLDNFL 114
Y L NFL
Sbjct: 123 YCCYGDLLNFL 133
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 17/131 (12%)
Query: 1 KYNV---VAEQNADNDITTLESLQFDF-ETIEDATNKFSTDNKLGEGGFGVLPNEH---- 52
KY V + E N T ++ Q + E E N LG G FG +
Sbjct: 11 KYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGL 70
Query: 53 -------EIAVKRLSRSSSQGAQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILVYE 103
++AVK L ++ +E + +E+ +++ L QH N+V LLG C +++ E
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 104 YVPNKRLDNFL 114
Y L NFL
Sbjct: 131 YCCYGDLLNFL 141
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 19 SLQFDFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINN 72
++ +++ E + +KLG G +G + +AVK L + + +E
Sbjct: 2 AMDPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLK 60
Query: 73 EVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
E V+ +++H NLV+LLG C ++ E++ L ++L E +Q
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 108
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 23 DFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVV 76
+++ E + +KLG G +G + +AVK L + + +E E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 77 VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ +++H NLV+LLG C ++ E++ L ++L E +Q
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 106
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 23 DFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVV 76
+++ E + +KLG G +G + +AVK L + + +E E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 77 VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ +++H NLV+LLG C ++ E++ L ++L E +Q
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ 106
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 39 KLGEGGFGVLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEK 98
+ GE G N ++AVK L + + Q E ++ LQH LVRL E
Sbjct: 25 QFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPI 83
Query: 99 ILVYEYVPNKRLDNFL 114
++ EY+ L +FL
Sbjct: 84 YIITEYMAKGSLLDFL 99
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 23 DFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVV 76
+++ E + +KLG G +G + +AVK L + + +E E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 77 VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ +++H NLV+LLG C ++ E++ L ++L E +Q
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 106
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 23 DFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVV 76
+++ E + +KLG G +G + +AVK L + + +E E V
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 66
Query: 77 VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ +++H NLV+LLG C ++ E++ L ++L E +Q
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 110
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 23 DFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVV 76
+++ E + +KLG G +G + +AVK L + + +E E V
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 64
Query: 77 VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ +++H NLV+LLG C ++ E++ L ++L E +Q
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 108
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 35 STDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
+ +KLG G +G + +AVK L + + +E E V+ +++H NLV+L
Sbjct: 14 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQL 72
Query: 89 LGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
LG C ++ E++ L ++L E +Q
Sbjct: 73 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ 104
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 23 DFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVV 76
+++ E + +KLG G +G + +AVK L + + +E E V
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 75
Query: 77 VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ +++H NLV+LLG C ++ E++ L ++L E +Q
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 119
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 23 DFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVV 76
+++ E + +KLG G +G + +AVK L + + +E E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 67
Query: 77 VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ +++H NLV+LLG C ++ E++ L ++L E +Q
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 111
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 23 DFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVV 76
+++ E + +KLG G +G + +AVK L + + +E E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 77 VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ +++H NLV+LLG C ++ E++ L ++L E +Q
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 106
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 23 DFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVV 76
+++ E + +KLG G +G + +AVK L + + +E E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 67
Query: 77 VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ +++H NLV+LLG C ++ E++ L ++L E +Q
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 111
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 23 DFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVV 76
+++ E + +KLG G +G + +AVK L + + +E E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 77 VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ +++H NLV+LLG C ++ E++ L ++L E +Q
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 106
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 23 DFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVV 76
+++ E + +KLG G +G + +AVK L + + +E E V
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 63
Query: 77 VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ +++H NLV+LLG C ++ E++ L ++L E +Q
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ 107
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 23 DFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVV 76
+++ E + +KLG G +G + +AVK L + + +E E V
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 63
Query: 77 VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ +++H NLV+LLG C ++ E++ L ++L E +Q
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 107
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 23 DFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVV 76
+++ E + +KLG G +G + +AVK L + + +E E V
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 64
Query: 77 VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ +++H NLV+LLG C ++ E++ L ++L E +Q
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 108
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 23 DFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVV 76
+++ E + +KLG G +G + +AVK L + + +E E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 67
Query: 77 VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ +++H NLV+LLG C ++ E++ L ++L E +Q
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 111
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 35 STDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
+ +KLG G +G + +AVK L + + +E E V+ +++H NLV+L
Sbjct: 14 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQL 72
Query: 89 LGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
LG C ++ E++ L ++L E +Q
Sbjct: 73 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 104
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 23/104 (22%)
Query: 11 DNDITTLESLQFDFETIEDATNK----------FSTDNKLGEGGFGV------LPNEHEI 54
D DI T E+L F + +A N+ F LG G FG +P ++
Sbjct: 11 DYDIPTTENLYF--QGSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKV 68
Query: 55 ----AVKRLSRSSSQGA-QEINNEVVVVAKLQHINLVRLLGFCL 93
A+K L ++S A +EI +E V+A + + ++ RLLG CL
Sbjct: 69 KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 112
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 14/124 (11%)
Query: 5 VAEQNADNDITTLESLQFDF-ETIEDATNKFSTDNKLGEGGFGVLPNEH----------- 52
+ E N T ++ Q + E E N LG G FG +
Sbjct: 3 IIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVL 62
Query: 53 EIAVKRLSRSSSQGAQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRL 110
++AVK L ++ +E + +E+ +++ L QH N+V LLG C +++ EY L
Sbjct: 63 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 122
Query: 111 DNFL 114
NFL
Sbjct: 123 LNFL 126
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Query: 18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVLP---------NEHEIAVK--RLSRSSSQG 66
E LQ E + N LGEG FG + ++AVK +L SS +
Sbjct: 20 EELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQRE 79
Query: 67 AQEINNEVVVVAKLQHINLVRLLGFCLE 94
+E +E + H N++RLLG C+E
Sbjct: 80 IEEFLSEAACMKDFSHPNVIRLLGVCIE 107
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 26 TIEDATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVV 76
T+ED F LG+G FG L E + +A+K L ++ + A ++ EV +
Sbjct: 10 TLED----FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEI 65
Query: 77 VAKLQHINLVRLLGFCLEREEKILVYEYVP 106
+ L+H N++RL G+ + L+ EY P
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAP 95
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 26 TIEDATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVV 76
T+ED F LG+G FG L E + +A+K L ++ + A ++ EV +
Sbjct: 10 TLED----FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEI 65
Query: 77 VAKLQHINLVRLLGFCLEREEKILVYEYVP 106
+ L+H N++RL G+ + L+ EY P
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAP 95
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 20/109 (18%)
Query: 40 LGEGGFG-VLPNEH---EIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLER 95
+G+G FG V+ ++ ++AVK + ++ AQ E V+ +L+H NLV+LLG +E
Sbjct: 20 IGKGEFGDVMLGDYRGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVEE 77
Query: 96 EEKI-LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF 143
+ + +V EY+ L ++L SR ++GG DC F
Sbjct: 78 KGGLYIVTEYMAKGSLVDYLR----------SRGRSVLGG---DCLLKF 113
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 20/109 (18%)
Query: 40 LGEGGFG-VLPNEH---EIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLER 95
+G+G FG V+ ++ ++AVK + ++ AQ E V+ +L+H NLV+LLG +E
Sbjct: 29 IGKGEFGDVMLGDYRGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVEE 86
Query: 96 EEKI-LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF 143
+ + +V EY+ L ++L SR ++GG DC F
Sbjct: 87 KGGLYIVTEYMAKGSLVDYLR----------SRGRSVLGG---DCLLKF 122
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 18 ESLQFDFETIEDATNKFSTDNKLGEGGFGV------LPNEHEIAVKRLSRSSSQGAQEIN 71
E+L F + + KLGEGGF L + H A+KR+ Q +E
Sbjct: 15 ENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQ 74
Query: 72 NEVVVVAKLQHINLVRLLGFCL-EREEKILVYEYVP 106
E + H N++RL+ +CL ER K + +P
Sbjct: 75 READMHRLFNHPNILRLVAYCLRERGAKHEAWLLLP 110
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 16/130 (12%)
Query: 12 NDITTLESLQFDFE-TIEDATNKFSTDNKLGEGGFGVLPNE-----------HEIAVKRL 59
N+ ++ Q ++ E N+ S LG G FG + +AVK L
Sbjct: 2 NNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML 61
Query: 60 SRSSSQGAQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEP 117
S+ +E + +E+ V++ L H+N+V LLG C +++ EY L NFL
Sbjct: 62 KPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR-- 119
Query: 118 EKQGQWDCSR 127
K+ + CS+
Sbjct: 120 RKRDSFICSK 129
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 20/109 (18%)
Query: 40 LGEGGFG-VLPNEH---EIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLER 95
+G+G FG V+ ++ ++AVK + ++ AQ E V+ +L+H NLV+LLG +E
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 96 EEKI-LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF 143
+ + +V EY+ L ++L SR ++GG DC F
Sbjct: 72 KGGLYIVTEYMAKGSLVDYLR----------SRGRSVLGG---DCLLKF 107
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 39 KLGEGGFGVLP-----NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCL 93
KLG G FG + N ++AVK L + + Q E ++ LQH LVRL
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 94 EREEKILVYEYVPNKRLDNFL 114
+ E ++ E++ L +FL
Sbjct: 78 KEEPIYIITEFMAKGSLLDFL 98
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP 94
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP 94
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAP 90
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+K L ++S A +EI +E V+A +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 81 QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+ ++ RLLG CL + L+ + +P L +++ E
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVRE 110
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 13/94 (13%)
Query: 26 TIEDATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSS--SQGAQ-EINNEVVV 76
TI+D F LG+G FG L E + +A+K L +S +G + ++ E+ +
Sbjct: 21 TIDD----FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEI 76
Query: 77 VAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL 110
A L H N++RL + +R L+ EY P L
Sbjct: 77 QAHLHHPNILRLYNYFYDRRRIYLILEYAPRGEL 110
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAP 88
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP 94
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP 92
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP 92
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP 93
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP 92
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP 96
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP 94
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAP 95
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP 94
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP 96
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP 93
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP 96
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP 96
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP 96
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 34.7 bits (78), Expect = 0.020, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 20/109 (18%)
Query: 40 LGEGGFG-VLPNEH---EIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLER 95
+G+G FG V+ ++ ++AVK + ++ AQ E V+ +L+H NLV+LLG +E
Sbjct: 201 IGKGEFGDVMLGDYRGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 96 EEKI-LVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNF 143
+ + +V EY+ L ++L SR ++GG DC F
Sbjct: 259 KGGLYIVTEYMAKGSLVDYLR----------SRGRSVLGG---DCLLKF 294
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPN---EHEIAVKRL--SRSSSQGAQEINNEVVVVAKLQH 82
E + + ++G G FG + ++AVK L + + Q Q NEV V+ K +H
Sbjct: 8 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 67
Query: 83 INLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+N++ +G+ + + I V ++ L + L+ E +
Sbjct: 68 VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHASETK 104
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAP 108
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 19/118 (16%)
Query: 22 FDFETIEDATNKFS---------TDNKLGEGGFG-------VLPNEHEI--AVKRL-SRS 62
F FE +A +F+ + +G G FG LP + EI A+K L S
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 63 SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+ + ++ +E ++ + H N++ L G + +++ E++ N LD+FL + + Q
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ 131
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP 94
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPN---EHEIAVKRL--SRSSSQGAQEINNEVVVVAKLQH 82
E + + ++G G FG + ++AVK L + + Q Q NEV V+ K +H
Sbjct: 20 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 79
Query: 83 INLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+N++ +G+ + + I V ++ L + L+ E +
Sbjct: 80 VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHASETK 116
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 40 LGEGGFGVLPNEHE-----------IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
LGEG FG + + I K L++S QG I E+ + L+H ++++L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKL 78
Query: 89 LGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN 142
++E I+V EY N+ D ++ + +K + + R ++ I C R+
Sbjct: 79 YDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIISAVEYCHRH 131
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+K L ++S A +EI +E V+A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 81 QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+ ++ RLLG CL + L+ + +P L +++ E
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVRE 109
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 40 LGEGGFGVLPNEHE-----------IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
LGEG FG + + I K L++S QG I E+ + L+H ++++L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKL 79
Query: 89 LGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN 142
++E I+V EY N+ D ++ + +K + + R ++ I C R+
Sbjct: 80 YDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIISAVEYCHRH 132
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAP 117
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 34.3 bits (77), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPN---EHEIAVKRL--SRSSSQGAQEINNEVVVVAKLQH 82
E + + ++G G FG + ++AVK L + + Q Q NEV V+ K +H
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 83 INLVRLLGFCLEREEKIL 100
+N++ +G+ + + I+
Sbjct: 64 VNILLFMGYSTKPQLAIV 81
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 34.3 bits (77), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPN---EHEIAVKRL--SRSSSQGAQEINNEVVVVAKLQH 82
E + + ++G G FG + ++AVK L + + Q Q NEV V+ K +H
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 83 INLVRLLGFCLEREEKILV 101
+N++ +G+ + + I+
Sbjct: 64 VNILLFMGYSTKPQLAIVT 82
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 34.3 bits (77), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPN---EHEIAVKRL--SRSSSQGAQEINNEVVVVAKLQH 82
E + + ++G G FG + ++AVK L + + Q Q NEV V+ K +H
Sbjct: 9 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 68
Query: 83 INLVRLLGFCLEREEKILV 101
+N++ +G+ + + I+
Sbjct: 69 VNILLFMGYSTKPQLAIVT 87
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPN---EHEIAVKRL--SRSSSQGAQEINNEVVVVAKLQH 82
E + + ++G G FG + ++AVK L + + Q Q NEV V+ K +H
Sbjct: 9 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 68
Query: 83 INLVRLLGFCLEREEKILV 101
+N++ +G+ + + I+
Sbjct: 69 VNILLFMGYSTKPQLAIVT 87
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPN---EHEIAVKRL--SRSSSQGAQEINNEVVVVAKLQH 82
E + + ++G G FG + ++AVK L + + Q Q NEV V+ K +H
Sbjct: 32 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 91
Query: 83 INLVRLLGFCLEREEKILV 101
+N++ +G+ + + I+
Sbjct: 92 VNILLFMGYSTKPQLAIVT 110
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPN---EHEIAVKRL--SRSSSQGAQEINNEVVVVAKLQH 82
E + + ++G G FG + ++AVK L + + Q Q NEV V+ K +H
Sbjct: 24 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 83
Query: 83 INLVRLLGFCLEREEKILV 101
+N++ +G+ + + I+
Sbjct: 84 VNILLFMGYSTKPQLAIVT 102
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPN---EHEIAVKRL--SRSSSQGAQEINNEVVVVAKLQH 82
E + + ++G G FG + ++AVK L + + Q Q NEV V+ K +H
Sbjct: 32 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 91
Query: 83 INLVRLLGFCLEREEKILV 101
+N++ +G+ + + I+
Sbjct: 92 VNILLFMGYSTKPQLAIVT 110
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 34.3 bits (77), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 40 LGEGGFGVLPNEHE-----------IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
LGEG FG + + I K L++S QG I E+ + L+H ++++L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKL 69
Query: 89 LGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN 142
++E I+V EY N+ D ++ + +K + + R ++ I C R+
Sbjct: 70 YDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIISAVEYCHRH 122
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 34.3 bits (77), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPN---EHEIAVKRL--SRSSSQGAQEINNEVVVVAKLQH 82
E + + ++G G FG + ++AVK L + + Q Q NEV V+ K +H
Sbjct: 31 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 90
Query: 83 INLVRLLGFCLEREEKILV 101
+N++ +G+ + + I+
Sbjct: 91 VNILLFMGYSTKPQLAIVT 109
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 34.3 bits (77), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPN---EHEIAVKRL--SRSSSQGAQEINNEVVVVAKLQH 82
E + + ++G G FG + ++AVK L + + Q Q NEV V+ K +H
Sbjct: 6 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 65
Query: 83 INLVRLLGFCLEREEKIL 100
+N++ +G+ + + I+
Sbjct: 66 VNILLFMGYSTKPQLAIV 83
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 34.3 bits (77), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG L E + +A+K L ++ + A ++ EV + + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAP 117
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 40 LGEGGFGVLPNEHE-----------IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
LGEG FG + + I K L++S QG I E+ + L+H ++++L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKL 73
Query: 89 LGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRN 142
++E I+V EY N+ D ++ + +K + + R ++ I C R+
Sbjct: 74 YDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIISAVEYCHRH 126
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+K L ++S A +EI +E V+A +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 81 QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+ ++ RLLG CL + L+ + +P L +++ E
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE 112
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+K L ++S A +EI +E V+A +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 81 QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+ ++ RLLG CL + L+ + +P L +++ E
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE 113
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 55 AVKRLSRSSSQG-AQEINNEVVVVAKLQHINLVRLLGFCLERE-EKILVYEYVPNKRLDN 112
AVK L+R + G + E +++ H N++ LLG CL E ++V Y+ + L N
Sbjct: 80 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 139
Query: 113 FL 114
F+
Sbjct: 140 FI 141
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+K L ++S A +EI +E V+A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 81 QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+ ++ RLLG CL + L+ + +P L +++ E
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE 111
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+K L ++S A +EI +E V+A +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 81 QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+ ++ RLLG CL + L+ + +P L +++ E
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE 113
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 55 AVKRLSRSSSQG-AQEINNEVVVVAKLQHINLVRLLGFCLERE-EKILVYEYVPNKRLDN 112
AVK L+R + G + E +++ H N++ LLG CL E ++V Y+ + L N
Sbjct: 121 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 180
Query: 113 FL 114
F+
Sbjct: 181 FI 182
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+K L ++S A +EI +E V+A +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 81 QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+ ++ RLLG CL + L+ + +P L +++ E
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE 110
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+K L ++S A +EI +E V+A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 81 QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+ ++ RLLG CL + L+ + +P L +++ E
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE 111
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 33.9 bits (76), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 55 AVKRLSRSSSQG-AQEINNEVVVVAKLQHINLVRLLGFCLERE-EKILVYEYVPNKRLDN 112
AVK L+R + G + E +++ H N++ LLG CL E ++V Y+ + L N
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 113 FL 114
F+
Sbjct: 122 FI 123
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 33.9 bits (76), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 55 AVKRLSRSSSQG-AQEINNEVVVVAKLQHINLVRLLGFCLERE-EKILVYEYVPNKRLDN 112
AVK L+R + G + E +++ H N++ LLG CL E ++V Y+ + L N
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
Query: 113 FL 114
F+
Sbjct: 120 FI 121
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 33.9 bits (76), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 55 AVKRLSRSSSQG-AQEINNEVVVVAKLQHINLVRLLGFCLERE-EKILVYEYVPNKRLDN 112
AVK L+R + G + E +++ H N++ LLG CL E ++V Y+ + L N
Sbjct: 67 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 126
Query: 113 FL 114
F+
Sbjct: 127 FI 128
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 33.9 bits (76), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 15/103 (14%)
Query: 20 LQFDFETIEDATNKFSTDNKLGEGGFGVLPNEH----EIAVKRLSRSS----SQGAQEIN 71
L+ DF + + + +G GGFG + E+AVK SQ + +
Sbjct: 2 LEIDFA-------ELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVR 54
Query: 72 NEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
E + A L+H N++ L G CL+ LV E+ L+ L
Sbjct: 55 QEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL 97
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 33.9 bits (76), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+K L ++S A +EI +E V+A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 81 QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+ ++ RLLG CL + L+ + +P L +++ E
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE 109
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 33.9 bits (76), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+K L ++S A +EI +E V+A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 81 QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+ ++ RLLG CL + L+ + +P L +++ E
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE 111
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 33.9 bits (76), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 30 ATNKFSTDNKLGEGGFGVLPNEHE------IAVKRLSRSSSQGA---QEINNEVVVVAKL 80
A F LG+G FG + E +A+K L ++ + A ++ EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 81 QHINLVRLLGFCLEREEKILVYEYVP 106
+H N++RL G+ + L+ EY P
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAP 91
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 33.9 bits (76), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 33 KFSTDNKLGEGGFGVLPN---EHEIAVKRL--SRSSSQGAQEINNEVVVVAKLQHINLVR 87
+ + ++G G FG + ++AVK L + + Q Q NEV V+ K +H+N++
Sbjct: 25 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 88 LLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
+G+ + I V ++ L + L+ E +
Sbjct: 85 FMGYSTAPQLAI-VTQWCEGSSLYHHLHASETK 116
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 33.9 bits (76), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 55 AVKRLSRSSSQG-AQEINNEVVVVAKLQHINLVRLLGFCLERE-EKILVYEYVPNKRLDN 112
AVK L+R + G + E +++ H N++ LLG CL E ++V Y+ + L N
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 113 FL 114
F+
Sbjct: 123 FI 124
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 55 AVKRLSRSSSQG-AQEINNEVVVVAKLQHINLVRLLGFCLERE-EKILVYEYVPNKRLDN 112
AVK L+R + G + E +++ H N++ LLG CL E ++V Y+ + L N
Sbjct: 57 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 116
Query: 113 FL 114
F+
Sbjct: 117 FI 118
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 55 AVKRLSRSSSQG-AQEINNEVVVVAKLQHINLVRLLGFCLERE-EKILVYEYVPNKRLDN 112
AVK L+R + G + E +++ H N++ LLG CL E ++V Y+ + L N
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 113 FL 114
F+
Sbjct: 122 FI 123
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 55 AVKRLSRSSSQG-AQEINNEVVVVAKLQHINLVRLLGFCLERE-EKILVYEYVPNKRLDN 112
AVK L+R + G + E +++ H N++ LLG CL E ++V Y+ + L N
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
Query: 113 FL 114
F+
Sbjct: 121 FI 122
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 33.9 bits (76), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 55 AVKRLSRSSSQG-AQEINNEVVVVAKLQHINLVRLLGFCLERE-EKILVYEYVPNKRLDN 112
AVK L+R + G + E +++ H N++ LLG CL E ++V Y+ + L N
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 113 FL 114
F+
Sbjct: 122 FI 123
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 33.9 bits (76), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 55 AVKRLSRSSSQG-AQEINNEVVVVAKLQHINLVRLLGFCLERE-EKILVYEYVPNKRLDN 112
AVK L+R + G + E +++ H N++ LLG CL E ++V Y+ + L N
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
Query: 113 FL 114
F+
Sbjct: 120 FI 121
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 33.9 bits (76), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 55 AVKRLSRSSSQG-AQEINNEVVVVAKLQHINLVRLLGFCLERE-EKILVYEYVPNKRLDN 112
AVK L+R + G + E +++ H N++ LLG CL E ++V Y+ + L N
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 113 FL 114
F+
Sbjct: 123 FI 124
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 33.9 bits (76), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPN---EHEIAVKRL--SRSSSQGAQEINNEVVVVAKLQH 82
E + + ++G G FG + ++AVK L + + Q Q NEV V+ K +H
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 83 INLVRLLGFCLEREEKIL 100
+N++ +G+ + I+
Sbjct: 64 VNILLFMGYSTAPQLAIV 81
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 33.9 bits (76), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 55 AVKRLSRSSSQG-AQEINNEVVVVAKLQHINLVRLLGFCLERE-EKILVYEYVPNKRLDN 112
AVK L+R + G + E +++ H N++ LLG CL E ++V Y+ + L N
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 113 FL 114
F+
Sbjct: 122 FI 123
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 33.9 bits (76), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 55 AVKRLSRSSSQG-AQEINNEVVVVAKLQHINLVRLLGFCLERE-EKILVYEYVPNKRLDN 112
AVK L+R + G + E +++ H N++ LLG CL E ++V Y+ + L N
Sbjct: 59 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 118
Query: 113 FL 114
F+
Sbjct: 119 FI 120
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 33.9 bits (76), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 55 AVKRLSRSSSQG-AQEINNEVVVVAKLQHINLVRLLGFCLERE-EKILVYEYVPNKRLDN 112
AVK L+R + G + E +++ H N++ LLG CL E ++V Y+ + L N
Sbjct: 54 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 113
Query: 113 FL 114
F+
Sbjct: 114 FI 115
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 55 AVKRLSRSSSQG-AQEINNEVVVVAKLQHINLVRLLGFCLERE-EKILVYEYVPNKRLDN 112
AVK L+R + G + E +++ H N++ LLG CL E ++V Y+ + L N
Sbjct: 81 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 140
Query: 113 FL 114
F+
Sbjct: 141 FI 142
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+K L ++S A +EI +E V+A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 81 QHINLVRLLGFCL 93
+ ++ RLLG CL
Sbjct: 77 DNPHVCRLLGICL 89
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+K L ++S A +EI +E V+A +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 81 QHINLVRLLGFCL 93
+ ++ RLLG CL
Sbjct: 85 DNPHVCRLLGICL 97
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent
Dual Inhibitor
Length = 315
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+K L ++S A +EI +E V+A +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 81 QHINLVRLLGFCL 93
+ ++ RLLG CL
Sbjct: 69 DNPHVCRLLGICL 81
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 55 AVKRLSRSSSQG-AQEINNEVVVVAKLQHINLVRLLGFCLERE-EKILVYEYVPNKRLDN 112
AVK L+R + G + E +++ H N++ LLG CL E ++V Y+ + L N
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
Query: 113 FL 114
F+
Sbjct: 121 FI 122
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+K L ++S A +EI +E V+A +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 81 QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+ ++ RLLG CL + L+ + +P L +++ E
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE 116
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+K L ++S A +EI +E V+A +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 81 QHINLVRLLGFCL 93
+ ++ RLLG CL
Sbjct: 78 DNPHVCRLLGICL 90
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+K L ++S A +EI +E V+A +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 81 QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+ ++ RLLG CL + L+ + +P L +++ E
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE 112
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
An Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+K L ++S A +EI +E V+A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 81 QHINLVRLLGFCL 93
+ ++ RLLG CL
Sbjct: 75 DNPHVCRLLGICL 87
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+K L ++S A +EI +E V+A +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 81 QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+ ++ RLLG CL + L+ + +P L +++ E
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE 116
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation
In Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation
In Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation
In Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation
In Complex With Iressa
Length = 327
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+K L ++S A +EI +E V+A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 81 QHINLVRLLGFCL 93
+ ++ RLLG CL
Sbjct: 75 DNPHVCRLLGICL 87
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+K L ++S A +EI +E V+A +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 81 QHINLVRLLGFCL 93
+ ++ RLLG CL
Sbjct: 78 DNPHVCRLLGICL 90
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+K L ++S A +EI +E V+A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 81 QHINLVRLLGFCL 93
+ ++ RLLG CL
Sbjct: 77 DNPHVCRLLGICL 89
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+K L ++S A +EI +E V+A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 81 QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+ ++ RLLG CL + L+ + +P L +++ E
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE 109
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+K L ++S A +EI +E V+A +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 81 QHINLVRLLGFCL 93
+ ++ RLLG CL
Sbjct: 72 DNPHVCRLLGICL 84
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 33.5 bits (75), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+K L ++S A +EI +E V+A +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 81 QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+ ++ RLLG CL + L+ + +P L +++ E
Sbjct: 81 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE 115
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 33.5 bits (75), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 61 RSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVP 106
+S Q Q + + ++ + L H ++VRLLG C + LV +Y+P
Sbjct: 53 KSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLP 97
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 33.5 bits (75), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 39 KLGEGGFGVLPNEHEIAV----------KRLSRSSSQGA--QEINNEVVVVAKLQHINLV 86
+LG G F ++ E + KR SR+S +G +EI EV ++ ++ H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNII 78
Query: 87 RLLGFCLEREEKILVYEYVPNKRLDNFLYEPE 118
L R + +L+ E V L +FL + E
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKE 110
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 33.5 bits (75), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 61 RSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVP 106
+S Q Q + + ++ + L H ++VRLLG C + LV +Y+P
Sbjct: 71 KSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLP 115
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 40 LGEGGFGVL------PNEHEIAVKRLSRSSSQGAQE-INNEVVVVAKLQHINLVRLLGFC 92
LG GGFGV+ ++ A+KR+ + + A+E + EV +AKL+H +VR
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 93 LER 95
LE+
Sbjct: 73 LEK 75
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 33.5 bits (75), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 40 LGEGGFG-------VLPNEHEI--AVKRL-SRSSSQGAQEINNEVVVVAKLQHINLVRLL 89
+G G FG LP + EI A+K L S + + ++ +E ++ + H N++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 90 GFCLEREEKILVYEYVPNKRLDNFLYEPEKQ 120
G + +++ E++ N LD+FL + + Q
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQ 105
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 33.5 bits (75), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 11/125 (8%)
Query: 30 ATNKFSTDNKLGEGGFGVLPNEHE------IAVKR-LSRSSSQGAQEIN-NEVVVVAKLQ 81
+ K+ +GEG +G++ +A+K+ L + ++I E+ ++ +L+
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 82 HINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRY--KIIGGRGRDC 139
H NLV LL C +++ LV+E+V + LD+ P + ++Y +II G G
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGL-DYQVVQKYLFQIINGIGFCH 141
Query: 140 SRNFL 144
S N +
Sbjct: 142 SHNII 146
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 33.1 bits (74), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Query: 34 FSTDNKLGEGGFG-------VLPNEHE--IAVKRLSRSSSQGAQ-EINNEVVVVAKLQHI 83
+ + +G G FG LP + E +A+K L ++ + + E ++ + H
Sbjct: 24 ITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 83
Query: 84 NLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
N++ L G + + ++V EY+ N LD FL
Sbjct: 84 NIIHLEGVVTKSKPVMIVTEYMENGSLDTFL 114
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 33.1 bits (74), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 23/126 (18%)
Query: 14 ITTLESLQFDFETIED---ATNKFSTD---------NKLGEGGFGVL----------PNE 51
I T E+L F D A KF+T+ +G G FG + E
Sbjct: 14 IPTTENLYFQGAMGSDPNQAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKE 73
Query: 52 HEIAVKRLSRSSSQGAQ-EINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL 110
+A+K L ++ + + E ++ + H N++RL G + + +++ EY+ N L
Sbjct: 74 VPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGAL 133
Query: 111 DNFLYE 116
D FL E
Sbjct: 134 DKFLRE 139
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 33.1 bits (74), Expect = 0.061, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 16/117 (13%)
Query: 13 DITTLESLQFDFETIEDATNKFSTDN------KLGEGGFGVL--------PNEHEIAVKR 58
D + ES D E ++D DN +LG G FG + + ++A+K
Sbjct: 311 DTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKV 370
Query: 59 LSRSSSQG-AQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
L + + + +E+ E ++ +L + +VRL+G C + E +LV E L FL
Sbjct: 371 LKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFL 426
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 32.7 bits (73), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 25 ETIEDATNKFSTDNKLGEGGF-GVLPNEH-----EIAVKRLSRSSSQGA---QEINNEVV 75
E IED F N LG+G F GV E E+A+K + + + A Q + NEV
Sbjct: 8 EKIED----FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVK 63
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+ +L+H +++ L + + LV E N ++ +L
Sbjct: 64 IHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL 102
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 32.7 bits (73), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 14/118 (11%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPNEHE-----------IAVKRLSRSSSQGA--QEINNEV 74
ED + + +LG G F ++ + I +RLS SS +G +EI EV
Sbjct: 8 EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLS-SSRRGVSREEIEREV 66
Query: 75 VVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKII 132
++ +++H N++ L + + +L+ E V L +FL E E + + ++ K I
Sbjct: 67 NILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 124
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 32.3 bits (72), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 34 FSTDNKLGEGGFGVLPNEHEIAV----------KRLSRSSSQGA--QEINNEVVVVAKLQ 81
+ +LG G F ++ E + KR SR+S +G +EI EV ++ ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 82 HINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPE 118
H N++ L R + +L+ E V L +FL + E
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE 110
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 32.3 bits (72), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 12/106 (11%)
Query: 39 KLGEGGFGVLPNEHEIAV----------KRLSRSSSQGA--QEINNEVVVVAKLQHINLV 86
+LG G F ++ E + KR SR+S +G +EI EV ++ ++ H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 87 RLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKII 132
L R + +L+ E V L +FL + E + + + K I
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 32.3 bits (72), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 72 NEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+E ++ + H N++RL G ++V EY+ N LD FL
Sbjct: 99 SEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL 141
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 32.3 bits (72), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 72 NEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+E ++ + H N++RL G ++V EY+ N LD FL
Sbjct: 99 SEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL 141
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 32.3 bits (72), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 12/106 (11%)
Query: 39 KLGEGGFGVLPNEHEIAV----------KRLSRSSSQGA--QEINNEVVVVAKLQHINLV 86
+LG G F ++ E + KR SR+S +G +EI EV ++ ++ H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 87 RLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKII 132
L R + +L+ E V L +FL + E + + + K I
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 32.3 bits (72), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 39 KLGEGGFGVLPNEHEIAV----------KRLSRSSSQGA--QEINNEVVVVAKLQHINLV 86
+LG G F ++ E + KR SR+S +G +EI EV ++ ++ H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 87 RLLGFCLEREEKILVYEYVPNKRLDNFLYEPE 118
L R + +L+ E V L +FL + E
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKE 110
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 32.3 bits (72), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 12/111 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHEIAV----------KRLSRSSSQGA--QEINNEVVVVAKLQ 81
+ +LG G F ++ E + KR SR+S +G +EI EV ++ ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 82 HINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKII 132
H N++ L R + +L+ E V L +FL + E + + + K I
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 40 LGEGGFGVL------PNEHEIAVKRLSRSSSQGAQE-INNEVVVVAKLQHINLVRLLGFC 92
+G GGFGV+ ++ A+KR+ + + A+E + EV +AKL+H +VR
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 73
Query: 93 LE 94
LE
Sbjct: 74 LE 75
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 39 KLGEGGFGVLPNEHE------IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
K+GEG G++ E +AVK + Q + + NEVV++ QH N+V +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 93 LEREEKILVYEYVPNKRLDNFL 114
L EE ++ E++ L + +
Sbjct: 112 LVGEELWVLMEFLQGGALTDIV 133
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Query: 36 TDNK-LGEGGFGV-----LPNEHE-IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
TD K +G G FGV L + E +A+K++ QG N E+ ++ KL H N+VRL
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVRL 78
Query: 89 LGFCLEREEKI------LVYEYVP 106
F EK LV +YVP
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVP 102
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Query: 36 TDNK-LGEGGFGV-----LPNEHE-IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
TD K +G G FGV L + E +A+K++ QG N E+ ++ KL H N+VRL
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVRL 78
Query: 89 LGFCLEREEKI------LVYEYVP 106
F EK LV +YVP
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVP 102
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 32.3 bits (72), Expect = 0.11, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Query: 36 TDNK-LGEGGFGV-----LPNEHE-IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
TD K +G G FGV L + E +A+K++ Q + N E+ ++ KL H N+VRL
Sbjct: 102 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRL 157
Query: 89 LGFCLEREEKI------LVYEYVP 106
F EK LV +YVP
Sbjct: 158 RYFFYSSGEKKDEVYLNLVLDYVP 181
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
Query: 40 LGEGGFGVLPNEH-----------EIAVKRLSRSSSQGAQE-INNEVVVVAKL-QHINLV 86
LG G FG + N ++AVK L + +E + +E+ ++ +L H N+V
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 87 RLLGFCLEREEKILVYEYVPNKRLDNFL 114
LLG C L++EY L N+L
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYL 140
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Query: 36 TDNK-LGEGGFGV-----LPNEHE-IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
TD K +G G FGV L + E +A+K++ QG N E+ ++ KL H N+VRL
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVRL 78
Query: 89 LGFCLEREEKI------LVYEYVP 106
F EK LV +YVP
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVP 102
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 28 EDATNKFSTDNKLGEGGFG---------VLPNEHE--IAVKRLSRSSSQGAQ-EINNEVV 75
E A K + +LG+G FG V+ +E E +A+K ++ ++S + E NE
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+ + ++VRLLG + + +++ E + L ++L
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 112
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 19/112 (16%)
Query: 22 FDFETIEDATNKFS---------TDNKLGEGGFG-------VLPNEHEI--AVKRLSRS- 62
F FE A +F+ + +G G FG +P + EI A+K L
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 63 SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+ + ++ +E ++ + H N++ L G + + +++ EY+ N LD FL
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL 121
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 28 EDATNKFSTDNKLGEGGFG---------VLPNEHE--IAVKRLSRSSSQGAQ-EINNEVV 75
E A K + +LG+G FG V+ +E E +A+K ++ ++S + E NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+ + ++VRLLG + + +++ E + L ++L
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 106
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 28 EDATNKFSTDNKLGEGGFG---------VLPNEHE--IAVKRLSRSSSQGAQ-EINNEVV 75
E A K + +LG+G FG V+ +E E +A+K ++ ++S + E NE
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 70
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+ + ++VRLLG + + +++ E + L ++L
Sbjct: 71 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 109
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 28 EDATNKFSTDNKLGEGGFG---------VLPNEHE--IAVKRLSRSSSQGAQ-EINNEVV 75
E A K + +LG+G FG V+ +E E +A+K ++ ++S + E NE
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 65
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+ + ++VRLLG + + +++ E + L ++L
Sbjct: 66 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 104
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 28 EDATNKFSTDNKLGEGGFG---------VLPNEHE--IAVKRLSRSSSQGAQ-EINNEVV 75
E A K + +LG+G FG V+ +E E +A+K ++ ++S + E NE
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+ + ++VRLLG + + +++ E + L ++L
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 112
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 28 EDATNKFSTDNKLGEGGFG---------VLPNEHE--IAVKRLSRSSSQGAQ-EINNEVV 75
E A K + +LG+G FG V+ +E E +A+K ++ ++S + E NE
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+ + ++VRLLG + + +++ E + L ++L
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 113
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 28 EDATNKFSTDNKLGEGGFG---------VLPNEHE--IAVKRLSRSSSQGAQ-EINNEVV 75
E A K + +LG+G FG V+ +E E +A+K ++ ++S + E NE
Sbjct: 12 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 71
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+ + ++VRLLG + + +++ E + L ++L
Sbjct: 72 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 110
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 28 EDATNKFSTDNKLGEGGFG---------VLPNEHE--IAVKRLSRSSSQGAQ-EINNEVV 75
E A K + +LG+G FG V+ +E E +A+K ++ ++S + E NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+ + ++VRLLG + + +++ E + L ++L
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 106
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 28 EDATNKFSTDNKLGEGGFG---------VLPNEHE--IAVKRLSRSSSQGAQ-EINNEVV 75
E A K + +LG+G FG V+ +E E +A+K ++ ++S + E NE
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+ + ++VRLLG + + +++ E + L ++L
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 28 EDATNKFSTDNKLGEGGFG---------VLPNEHE--IAVKRLSRSSSQGAQ-EINNEVV 75
E A K + +LG+G FG V+ +E E +A+K ++ ++S + E NE
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+ + ++VRLLG + + +++ E + L ++L
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 113
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 28 EDATNKFSTDNKLGEGGFG---------VLPNEHE--IAVKRLSRSSSQGAQ-EINNEVV 75
E A K + +LG+G FG V+ +E E +A+K ++ ++S + E NE
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+ + ++VRLLG + + +++ E + L ++L
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 28 EDATNKFSTDNKLGEGGFG---------VLPNEHE--IAVKRLSRSSSQGAQ-EINNEVV 75
E A K + +LG+G FG V+ +E E +A+K ++ ++S + E NE
Sbjct: 43 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 102
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+ + ++VRLLG + + +++ E + L ++L
Sbjct: 103 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 141
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 40 LGEGGFGVL-------PNEHE--IAVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVRLL 89
+G G FG + P + E +A+K L + + +E +E ++ + +H N++RL
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 90 GFCLEREEKILVYEYVPNKRLDNFL 114
G +++ E++ N LD+FL
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFL 106
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 32 NKFSTDNKLGEGGFGVL--------PNEHEIAVKRLSRSSSQG-AQEINNEVVVVAKLQH 82
N D +LG G FG + + ++A+K L + + + +E+ E ++ +L +
Sbjct: 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN 69
Query: 83 INLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+VRL+G C + E +LV E L FL
Sbjct: 70 PYIVRLIGVC-QAEALMLVMEMAGGGPLHKFL 100
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 40 LGEGGFGVLPNEH----EIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLER 95
+G G FGV+ ++A+K++ S + A + E+ ++++ H N+V+L G CL
Sbjct: 17 VGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIV--ELRQLSRVNHPNIVKLYGACL-- 72
Query: 96 EEKILVYEYVPNKRLDNFLYEPEK 119
LV EY L N L+ E
Sbjct: 73 NPVCLVMEYAEGGSLYNVLHGAEP 96
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 54 IAVKRLSRSSSQGA-QEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDN 112
+A+K L ++S A +EI +E V+A + + ++ RLLG CL + L+ + +P L +
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLD 112
Query: 113 FLYE 116
++ E
Sbjct: 113 YVRE 116
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 40 LGEGGFGVLPNEH----EIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCLER 95
+G G FGV+ ++A+K++ S + A + E+ ++++ H N+V+L G CL
Sbjct: 16 VGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIV--ELRQLSRVNHPNIVKLYGACL-- 71
Query: 96 EEKILVYEYVPNKRLDNFLYEPEK 119
LV EY L N L+ E
Sbjct: 72 NPVCLVMEYAEGGSLYNVLHGAEP 95
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium
Parvum In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium
Parvum In Complex With Indirubin E804
Length = 383
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 27 IEDATNKFSTDNKLGEGGFGVLPNEHEI-AVKRLS-RSSSQGAQEINNEVVVVAKLQHIN 84
+E ++ K+S LG G FG++ +I + KR + + Q + N E+ ++ L H+N
Sbjct: 2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVN 61
Query: 85 LVRLLGF 91
+++L+ +
Sbjct: 62 IIKLVDY 68
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 40 LGEGGFGVL-------PNEHE--IAVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVRLL 89
+G G FG + P + E +A+K L + + +E +E ++ + +H N++RL
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 90 GFCLEREEKILVYEYVPNKRLDNFL 114
G +++ E++ N LD+FL
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFL 108
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 11/73 (15%)
Query: 32 NKFSTDNKLGEGGFGV------LPNEHEI----AVKRLSRSSSQGA-QEINNEVVVVAKL 80
+F LG G FG +P ++ A+ L ++S A +EI +E V+A +
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 81 QHINLVRLLGFCL 93
+ ++ RLLG CL
Sbjct: 109 DNPHVCRLLGICL 121
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 26 TIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAK 79
++ D K++ K+G+G G + E+A+++++ + I NE++V+ +
Sbjct: 15 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 74
Query: 80 LQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
++ N+V L L +E +V EY+ L + + E
Sbjct: 75 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE 111
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 26 TIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAK 79
++ D K++ K+G+G G + E+A+++++ + I NE++V+ +
Sbjct: 14 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 80 LQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
++ N+V L L +E +V EY+ L + + E
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE 110
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 26 TIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAK 79
++ D K++ K+G+G G + E+A+++++ + I NE++V+ +
Sbjct: 14 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 80 LQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
++ N+V L L +E +V EY+ L + + E
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE 110
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 26 TIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAK 79
++ D K++ K+G+G G + E+A+++++ + I NE++V+ +
Sbjct: 14 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 80 LQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
++ N+V L L +E +V EY+ L + + E
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE 110
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query: 12 NDITTLESLQFDFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQ 65
+D LE L+ ++ D K++ K+G+G G + E+A+++++
Sbjct: 2 SDEEILEKLRI-IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP 60
Query: 66 GAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYE 116
+ I NE++V+ + ++ N+V L L +E +V EY+ L + + E
Sbjct: 61 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE 111
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 14/94 (14%)
Query: 25 ETIEDATNKFSTDN-----KLGEGGFGVL------PNEHEIAVKRLS--RSSSQGAQEIN 71
E + +A+ KFS DN +LG+G F V+ E A K ++ + S++ Q++
Sbjct: 18 EFMMNASTKFS-DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE 76
Query: 72 NEVVVVAKLQHINLVRLLGFCLEREEKILVYEYV 105
E + KLQH N+VRL E LV++ V
Sbjct: 77 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLV 110
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation
In Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation
In Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation
In Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation
In Complex With Afn941
Length = 327
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 54 IAVKRLSRSSSQGA-QEINNEVVVVAKLQHINLVRLLGFCL 93
+A+K L ++S A +EI +E V+A + + ++ RLLG CL
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL 87
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 54 IAVKRLSRSSSQGA-QEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDN 112
+A+K L ++S A +EI +E V+A + + ++ RLLG CL + L+ + +P L +
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 112
Query: 113 FLYE 116
++ E
Sbjct: 113 YVRE 116
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 40 LGEGGFG-----VLPNEH----EIAVKRLSRSSSQGAQE-INNEVVVVAKLQHINLVRLL 89
LGEG FG V N +AVK + + +E +E V++ L H ++V+L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 90 GFCLEREEKILVYEYVPNKRLDNFL 114
G +E E ++ E P L ++L
Sbjct: 80 GI-IEEEPTWIIMELYPYGELGHYL 103
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 40 LGEGGFG-----VLPNEH----EIAVKRLSRSSSQGAQE-INNEVVVVAKLQHINLVRLL 89
LGEG FG V N +AVK + + +E +E V++ L H ++V+L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 90 GFCLEREEKILVYEYVPNKRLDNFL 114
G +E E ++ E P L ++L
Sbjct: 76 GI-IEEEPTWIIMELYPYGELGHYL 99
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 27 IEDATNKFSTDNKLGEGGFGVLPN---EHEIAVK--RLSRSSSQGAQEINNEVVVVAKLQ 81
IE + ST ++G G FG + ++AVK ++ + + Q NEV V+ K +
Sbjct: 33 IEASEVMLST--RIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTR 90
Query: 82 HINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQ 122
H+N++ +G+ + ++ +V ++ L L+ E + Q
Sbjct: 91 HVNILLFMGY-MTKDNLAIVTQWCEGSSLYKHLHVQETKFQ 130
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 40 LGEGGFG-----VLPNEH----EIAVKRLSRSSSQGAQE-INNEVVVVAKLQHINLVRLL 89
LGEG FG V N +AVK + + +E +E V++ L H ++V+L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 90 GFCLEREEKILVYEYVPNKRLDNFL 114
G +E E ++ E P L ++L
Sbjct: 92 GI-IEEEPTWIIMELYPYGELGHYL 115
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 40 LGEGGFG-------VLPNEHEI--AVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVRLL 89
+G G FG +P + EI A+K L + + ++ +E ++ + H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 90 GFCLEREEKILVYEYVPNKRLDNFL 114
G + + +++ EY+ N LD FL
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFL 100
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 12/72 (16%)
Query: 24 FETIEDATNKFSTDNKLGEGGFG--VLPNEHE------IAVKRLSRSSSQGAQEINNEVV 75
F+++E K+ K+GEG FG +L E I +SR SS+ +E EV
Sbjct: 20 FQSME----KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVA 75
Query: 76 VVAKLQHINLVR 87
V+A ++H N+V+
Sbjct: 76 VLANMKHPNIVQ 87
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 20/119 (16%)
Query: 23 DFETIEDATNKFSTD-----NKLGEGGFGVL------------PNE-HEIAVKRL-SRSS 63
++E ED + D LGEG FG + PN ++AVK L S ++
Sbjct: 14 EYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 73
Query: 64 SQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQG 121
+ ++ +E+ ++ + +H N++ LLG C + ++ EY L +L E G
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPG 132
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 30.8 bits (68), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 40 LGEGGFG-------VLPNEHEI--AVKRLSRS-SSQGAQEINNEVVVVAKLQHINLVRLL 89
+G G FG +P + EI A+K L + + ++ +E ++ + H N++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 90 GFCLEREEKILVYEYVPNKRLDNFL 114
G + + +++ EY+ N LD FL
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFL 106
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 23/124 (18%)
Query: 18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQG 66
E L +D E ++ LG G FG + +AVK L ++
Sbjct: 15 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS 74
Query: 67 AQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILVY----------EYVPNKRLDNFL 114
+ +E+ ++ + H+N+V LLG C + ++V Y+ +KR +
Sbjct: 75 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 134
Query: 115 YEPE 118
Y+PE
Sbjct: 135 YKPE 138
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 28/129 (21%)
Query: 14 ITTLESLQF--------DFETIEDATNKFSTD-----NKLGEGGFGVL------------ 48
I T E+L F ++E ED + D LGEG FG +
Sbjct: 38 IPTTENLYFQGMLAGVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDK 97
Query: 49 PNE-HEIAVKRL-SRSSSQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYV 105
PN ++AVK L S ++ + ++ +E+ ++ + +H N++ LLG C + ++ EY
Sbjct: 98 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 157
Query: 106 PNKRLDNFL 114
L +L
Sbjct: 158 SKGNLREYL 166
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 13/80 (16%)
Query: 39 KLGEGGFGVL-------PNEH--EIAVKRLSR---SSSQGAQEINNEVVVVAKLQHINLV 86
KLG+G FGV+ P+ +AVK L S + + EV + L H NL+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 87 RLLGFCLEREEKILVYEYVP 106
RL G L K +V E P
Sbjct: 79 RLYGVVLTPPMK-MVTELAP 97
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 37 DNKLGEGGFG----VLPNEH-EIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGF 91
+ KLG G FG N+H ++AVK + + S + E V+ LQH LV+L
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHA- 244
Query: 92 CLEREEKILVYEYVPNKRLDNFLYEPEKQGQ 122
+ +E ++ E++ L +FL E Q
Sbjct: 245 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQ 275
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Query: 36 TDNK-LGEGGFGV-----LPNEHE-IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
TD K +G G FGV L + E +A+K++ Q + N E+ ++ KL H N+VRL
Sbjct: 57 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRL 112
Query: 89 LGFCLEREEKI------LVYEYVP 106
F EK LV +YVP
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVP 136
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 30.4 bits (67), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 23 DFETIEDATNKFSTDN-----KLGEGGFGVL------------PNEH-EIAVKRLSRSSS 64
++E ED +F D LGEG FG + P E +AVK L ++
Sbjct: 21 EYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 65 Q-GAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+ ++ +E+ ++ + +H N++ LLG C + ++ EY L +L
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYL 132
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Query: 36 TDNK-LGEGGFGV-----LPNEHE-IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
TD K +G G FGV L + E +A+K++ Q + N E+ ++ KL H N+VRL
Sbjct: 59 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRL 114
Query: 89 LGFCLEREEKI------LVYEYVP 106
F EK LV +YVP
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVP 138
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Query: 36 TDNK-LGEGGFGV-----LPNEHE-IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
TD K +G G FGV L + E +A+K++ Q + N E+ ++ KL H N+VRL
Sbjct: 57 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRL 112
Query: 89 LGFCLEREEKI------LVYEYVP 106
F EK LV +YVP
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVP 136
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 13/80 (16%)
Query: 39 KLGEGGFGVL-------PNEH--EIAVKRLSR---SSSQGAQEINNEVVVVAKLQHINLV 86
KLG+G FGV+ P+ +AVK L S + + EV + L H NL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 87 RLLGFCLEREEKILVYEYVP 106
RL G L K +V E P
Sbjct: 75 RLYGVVLTPPMK-MVTELAP 93
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 30.4 bits (67), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Query: 36 TDNK-LGEGGFGV-----LPNEHE-IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
TD K +G G FGV L + E +A+K++ Q + N E+ ++ KL H N+VRL
Sbjct: 51 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRL 106
Query: 89 LGFCLEREEKI------LVYEYVP 106
F EK LV +YVP
Sbjct: 107 RYFFYSSGEKKDEVYLNLVLDYVP 130
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Query: 36 TDNK-LGEGGFGV-----LPNEHE-IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
TD K +G G FGV L + E +A+K++ Q + N E+ ++ KL H N+VRL
Sbjct: 61 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRL 116
Query: 89 LGFCLEREEKI------LVYEYVP 106
F EK LV +YVP
Sbjct: 117 RYFFYSSGEKKDEVYLNLVLDYVP 140
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 13/80 (16%)
Query: 39 KLGEGGFGVL-------PNEH--EIAVKRLSR---SSSQGAQEINNEVVVVAKLQHINLV 86
KLG+G FGV+ P+ +AVK L S + + EV + L H NL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 87 RLLGFCLEREEKILVYEYVP 106
RL G L K +V E P
Sbjct: 75 RLYGVVLTPPMK-MVTELAP 93
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 13/80 (16%)
Query: 39 KLGEGGFGVL-------PNEH--EIAVKRLSR---SSSQGAQEINNEVVVVAKLQHINLV 86
KLG+G FGV+ P+ +AVK L S + + EV + L H NL+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 87 RLLGFCLEREEKILVYEYVP 106
RL G L K +V E P
Sbjct: 85 RLYGVVLTPPMK-MVTELAP 103
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 13/80 (16%)
Query: 39 KLGEGGFGVL-------PNEH--EIAVKRLSR---SSSQGAQEINNEVVVVAKLQHINLV 86
KLG+G FGV+ P+ +AVK L S + + EV + L H NL+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 87 RLLGFCLEREEKILVYEYVP 106
RL G L K +V E P
Sbjct: 85 RLYGVVLTPPMK-MVTELAP 103
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 53 EIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL 110
E+AVK + ++ +S Q++ EV ++ L H N+V+L + LV EY +
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 111 DNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFL 144
++L + + + +++ I + C + F+
Sbjct: 101 FDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 13/80 (16%)
Query: 39 KLGEGGFGVL-------PNEH--EIAVKRLSR---SSSQGAQEINNEVVVVAKLQHINLV 86
KLG+G FGV+ P+ +AVK L S + + EV + L H NL+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 87 RLLGFCLEREEKILVYEYVP 106
RL G L K +V E P
Sbjct: 79 RLYGVVLTPPMK-MVTELAP 97
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 13/80 (16%)
Query: 39 KLGEGGFGVL-------PNEH--EIAVKRLSR---SSSQGAQEINNEVVVVAKLQHINLV 86
KLG+G FGV+ P+ +AVK L S + + EV + L H NL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 87 RLLGFCLEREEKILVYEYVP 106
RL G L K +V E P
Sbjct: 75 RLYGVVLTPPMK-MVTELAP 93
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 53 EIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL 110
E+AVK + ++ +S Q++ EV ++ L H N+V+L + LV EY +
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 111 DNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFL 144
++L + + + +++ I + C + F+
Sbjct: 101 FDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 28 EDATNKFSTDNKLGEGGFG--VLPNEHE----IAVKRLSRSSSQGAQE-INNEVVVVAKL 80
ED F LG G F VL E AVK + + + +G + I NE+ V+ K+
Sbjct: 18 EDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKI 77
Query: 81 QHINLVRL 88
+H N+V L
Sbjct: 78 KHENIVAL 85
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 25 ETIEDATNKFSTDNK----LGEGGFG-VLPNEHEIAVKR-LSRSSSQGAQEINNEVVVVA 78
ET +F D K +G GGFG V +H I K + R ++ EV +A
Sbjct: 1 ETKYTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALA 60
Query: 79 KLQHINLVRLLGFCLEREEKILVYEYVP---NKRLDNFLYEPE 118
KL H+N+V G C + ++Y P + L++ Y+PE
Sbjct: 61 KLDHVNIVHYNG-CWDG------FDYDPETSDDSLESSDYDPE 96
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 53 EIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL 110
E+AVK + ++ +S Q++ EV ++ L H N+V+L + LV EY +
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 111 DNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFL 144
++L + + + +++ I + C + F+
Sbjct: 101 FDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 30.0 bits (66), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Query: 36 TDNK-LGEGGFGV-----LPNEHE-IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
TD K +G G FGV L + E +A+K++ Q + N E+ ++ KL H N+VRL
Sbjct: 28 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRL 83
Query: 89 LGFCLEREEKI------LVYEYVP 106
F EK LV +YVP
Sbjct: 84 RYFFYSSGEKKDEVYLNLVLDYVP 107
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 30.0 bits (66), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 13/88 (14%)
Query: 40 LGEGGFGVLP----------NEHEIAVKRL-SRSSSQGAQEINNEVVVVAKLQHINLVRL 88
LGEG FG + ++AVK L S ++ E+ ++ L H N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 89 LGFCLEREEK--ILVYEYVPNKRLDNFL 114
G C E L+ E++P+ L +L
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL 116
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 30.0 bits (66), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 28 EDATNKFSTDNKLGEGGFGVLPNEHEIAVKRLSRSSSQGA--QEINNEVVVVAKLQHINL 85
E + +F+ K + G G I +RLS SS +G +EI EV ++ +++H N+
Sbjct: 12 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLS-SSRRGVSREEIEREVNILREIRHPNI 70
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFLYEPE 118
+ L + + +L+ E V L +FL E E
Sbjct: 71 ITLHDIFENKTDVVLILELVSGGELFDFLAEKE 103
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 30.0 bits (66), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 23 DFETIEDATNKFSTDN-----KLGEGGFGVL------------PNEH-EIAVKRLSRSSS 64
++E ED +F D LGEG FG + P E +AVK L ++
Sbjct: 21 EYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 65 Q-GAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+ ++ +E+ ++ + +H N++ LLG C + ++ EY L +L
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYL 132
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 30.0 bits (66), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 23 DFETIEDATNKFSTDN-----KLGEGGFGVL------------PNEH-EIAVKRLSRSSS 64
++E ED +F D LGEG FG + P E +AVK L ++
Sbjct: 21 EYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 65 Q-GAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+ ++ +E+ ++ + +H N++ LLG C + ++ EY L +L
Sbjct: 81 EEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 30.0 bits (66), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Query: 36 TDNK-LGEGGFGV-----LPNEHE-IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
TD K +G G FGV L + E +A+K++ Q + N E+ ++ KL H N+VRL
Sbjct: 35 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRL 90
Query: 89 LGFCLEREEKI------LVYEYVP 106
F EK LV +YVP
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVP 114
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 30.0 bits (66), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 23 DFETIEDATNKFSTDN-----KLGEGGFGVL------------PNEH-EIAVKRLSRSSS 64
++E ED +F D LGEG FG + P E +AVK L ++
Sbjct: 21 EYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 65 Q-GAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+ ++ +E+ ++ + +H N++ LLG C + ++ EY L +L
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 39 KLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
K+GEG G++ + +AVK++ Q + + NEVV++ QH N+V +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 93 LEREEKILVYEYV 105
L +E +V E++
Sbjct: 218 LVGDELWVVMEFL 230
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Query: 36 TDNK-LGEGGFGV-----LPNEHE-IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
TD K +G G FGV L + E +A+K++ Q + N E+ ++ KL H N+VRL
Sbjct: 31 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRL 86
Query: 89 LGFCLEREEKI------LVYEYVP 106
F EK LV +YVP
Sbjct: 87 RYFFYSSGEKKDEVYLNLVLDYVP 110
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 23 DFETIEDATNKFSTDN-----KLGEGGFGVL------------PNEH-EIAVKRLSRSSS 64
++E ED +F D LGEG FG + P E +AVK L ++
Sbjct: 21 EYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 65 Q-GAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+ ++ +E+ ++ + +H N++ LLG C + ++ EY L +L
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 23 DFETIEDATNKFSTDN-----KLGEGGFGVL------------PNEH-EIAVKRLSRSSS 64
++E ED +F D LGEG FG + P E +AVK L ++
Sbjct: 21 EYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 65 Q-GAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+ ++ +E+ ++ + +H N++ LLG C + ++ EY L +L
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Query: 36 TDNK-LGEGGFGV-----LPNEHE-IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
TD K +G G FGV L + E +A+K++ Q + N E+ ++ KL H N+VRL
Sbjct: 42 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRL 97
Query: 89 LGFCLEREEKI------LVYEYVP 106
F EK LV +YVP
Sbjct: 98 RYFFYSSGEKKDEVYLNLVLDYVP 121
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 23 DFETIEDATNKFSTDN-----KLGEGGFGVL------------PNEH-EIAVKRLSRSSS 64
++E ED +F D LGEG FG + P E +AVK L ++
Sbjct: 21 EYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 65 Q-GAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+ ++ +E+ ++ + +H N++ LLG C + ++ EY L +L
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 37 DNKLGEGGFG----VLPNEH-EIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGF 91
+ KLG G FG N+H ++AVK + + S + E V+ LQH LV+L
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHA- 77
Query: 92 CLEREEKILVYEYVPNKRLDNFLYEPEKQGQ 122
+ +E ++ E++ L +FL E Q
Sbjct: 78 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQ 108
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Query: 36 TDNK-LGEGGFGV-----LPNEHE-IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
TD K +G G FGV L + E +A+K++ Q + N E+ ++ KL H N+VRL
Sbjct: 35 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRL 90
Query: 89 LGFCLEREEKI------LVYEYVP 106
F EK LV +YVP
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVP 114
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLS--RSSSQGAQEINNEVVVVAKLQH 82
++ + +LG+G F V+ E A K ++ + S++ Q++ E + KLQH
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 83 INLVRLLGFCLEREEKILVYEYVPNKRL 110
N+VRL E LV++ V L
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGEL 91
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 31 TNKFSTDNKLGEGGFGV------LPNEHEIAVKRLS--RSSSQGAQEINNEVVVVAKLQH 82
T+++ +LG+G F V +P E A K ++ + S++ Q++ E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 83 INLVRLLGFCLEREEKILVYEYV 105
N+VRL E LV++ V
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLV 85
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 39 KLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
K+GEG G++ + +AVK++ Q + + NEVV++ QH N+V +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 93 LEREEKILVYEYV 105
L +E +V E++
Sbjct: 87 LVGDELWVVMEFL 99
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLS--RSSSQGAQEINNEVVVVAKLQH 82
++ + +LG+G F V+ E A K ++ + S++ Q++ E + KLQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 83 INLVRLLGFCLEREEKILVYEYVPNKRL 110
N+VRL E LV++ V L
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGEL 92
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Query: 36 TDNK-LGEGGFGV-----LPNEHE-IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
TD K +G G FGV L + E +A+K++ Q + N E+ ++ KL H N+VRL
Sbjct: 36 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRL 91
Query: 89 LGFCLEREEKI------LVYEYVP 106
F EK LV +YVP
Sbjct: 92 RYFFYSSGEKKDEVYLNLVLDYVP 115
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 13/88 (14%)
Query: 40 LGEGGFGVLP----------NEHEIAVKRL-SRSSSQGAQEINNEVVVVAKLQHINLVRL 88
LGEG FG + ++AVK L S ++ E+ ++ L H N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 89 LGFCLEREEK--ILVYEYVPNKRLDNFL 114
G C E L+ E++P+ L +L
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL 104
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 31 TNKFSTDNKLGEGGFGV------LPNEHEIAVKRLS--RSSSQGAQEINNEVVVVAKLQH 82
T+++ +LG+G F V +P E A K ++ + S++ Q++ E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 83 INLVRLLGFCLEREEKILVYEYV 105
N+VRL E LV++ V
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLV 85
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 39 KLGEGGFGVL---PNEH---EIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
K+GEG G++ +H ++AVK++ Q + + NEVV++ H N+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 93 LEREEKILVYEYVPNKRLDNFL 114
L +E +V E++ L + +
Sbjct: 112 LVGDELWVVMEFLEGGALTDIV 133
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 12/78 (15%)
Query: 40 LGEGGFGV------LPN----EHEIAVKRLSRSSSQGA-QEINNEVVVVAKLQHINLVRL 88
LG G FG +P+ + +A+K L ++S A +EI +E V+A + + RL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 89 LGFCLEREEKILVYEYVP 106
LG CL + LV + +P
Sbjct: 85 LGICLTSTVQ-LVTQLMP 101
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 39 KLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
K+GEG G++ + +AVK++ Q + + NEVV++ QH N+V +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 93 LEREEKILVYEYV 105
L +E +V E++
Sbjct: 98 LVGDELWVVMEFL 110
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 13/97 (13%)
Query: 18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQG 66
E L +D E ++ + LG G FG + +AVK L ++
Sbjct: 13 ERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS 72
Query: 67 AQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILV 101
+ +E+ ++ + H+N+V LLG C + ++V
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 39 KLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
K+GEG G++ + +AVK++ Q + + NEVV++ QH N+V +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 93 LEREEKILVYEYV 105
L +E +V E++
Sbjct: 96 LVGDELWVVMEFL 108
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 28 EDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQGAQ-EINNEVV 75
E + K + +LG+G FG++ E +AVK ++ S+S + E NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+ ++VRLLG + + ++V E + + L ++L
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 111
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 31 TNKFSTDNKLGEGGFGVL------PNEHEIAVKRLS--RSSSQGAQEINNEVVVVAKLQH 82
++ + +LG+G F V+ E A K ++ + S++ Q++ E + KLQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 83 INLVRLLGFCLEREEKILVYEYV 105
N+VRL E LV++ V
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLV 87
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 39 KLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
K+GEG G++ + +AVK++ Q + + NEVV++ QH N+V +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 93 LEREEKILVYEYV 105
L +E +V E++
Sbjct: 91 LVGDELWVVMEFL 103
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 28 EDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQGAQ-EINNEVV 75
E + K + +LG+G FG++ E +AVK ++ S+S + E NE
Sbjct: 10 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 69
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+ ++VRLLG + + ++V E + + L ++L
Sbjct: 70 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 108
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 28 EDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQGAQ-EINNEVV 75
E + K + +LG+G FG++ E +AVK ++ S+S + E NE
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 71
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+ ++VRLLG + + ++V E + + L ++L
Sbjct: 72 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 110
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 28 EDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQGAQ-EINNEVV 75
E + K + +LG+G FG++ E +AVK ++ S+S + E NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+ ++VRLLG + + ++V E + + L ++L
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 111
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 28 EDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQGAQ-EINNEVV 75
E + K + +LG+G FG++ E +AVK ++ S+S + E NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+ ++VRLLG + + ++V E + + L ++L
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 111
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 28 EDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQGAQ-EINNEVV 75
E + K + +LG+G FG++ E +AVK ++ S+S + E NE
Sbjct: 14 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 73
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+ ++VRLLG + + ++V E + + L ++L
Sbjct: 74 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 112
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 29.6 bits (65), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Query: 36 TDNK-LGEGGFGV-----LPNEHE-IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
TD K +G G FGV L + E +A+K++ Q + N E+ ++ KL H N+VRL
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRL 78
Query: 89 LGFCLEREEKI------LVYEYVP 106
F EK LV +YVP
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVP 102
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 29.6 bits (65), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Query: 36 TDNK-LGEGGFGV-----LPNEHE-IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
TD K +G G FGV L + E +A+K++ Q + N E+ ++ KL H N+VRL
Sbjct: 24 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRL 79
Query: 89 LGFCLEREEKI------LVYEYVP 106
F EK LV +YVP
Sbjct: 80 RYFFYSSGEKKDEVYLNLVLDYVP 103
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 29.6 bits (65), Expect = 0.55, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 37 DNKLGEGGFG----VLPNEH-EIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGF 91
+ KLG G FG N+H ++AVK + + S + E V+ LQH LV+L
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHA- 250
Query: 92 CLEREEKILVYEYVPNKRLDNFLYEPEKQGQ 122
+ +E ++ E++ L +FL E Q
Sbjct: 251 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQ 281
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 29.6 bits (65), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Query: 36 TDNK-LGEGGFGV-----LPNEHE-IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
TD K +G G FGV L + E +A+K++ Q + N E+ ++ KL H N+VRL
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRL 78
Query: 89 LGFCLEREEKI------LVYEYVP 106
F EK LV +YVP
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVP 102
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 29.6 bits (65), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 28 EDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQGAQ-EINNEVV 75
E + K + +LG+G FG++ E +AVK ++ S+S + E NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+ ++VRLLG + + ++V E + + L ++L
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 111
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 29.6 bits (65), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 39 KLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFC 92
K+GEG G++ + +AVK++ Q + + NEVV++ QH N+V +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 93 LEREEKILVYEYV 105
L +E +V E++
Sbjct: 141 LVGDELWVVMEFL 153
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 29.6 bits (65), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Query: 36 TDNK-LGEGGFGV-----LPNEHE-IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
TD K +G G FGV L + E +A+K++ Q + N E+ ++ KL H N+VRL
Sbjct: 27 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRL 82
Query: 89 LGFCLEREEKI------LVYEYVP 106
F EK LV +YVP
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVP 106
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 29.6 bits (65), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Query: 36 TDNK-LGEGGFGV-----LPNEHE-IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
TD K +G G FGV L + E +A+K++ Q + N E+ ++ KL H N+VRL
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRL 78
Query: 89 LGFCLEREEKI------LVYEYVP 106
F EK LV +YVP
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVP 102
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 29.6 bits (65), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 28 EDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQGAQ-EINNEVV 75
E + K + +LG+G FG++ E +AVK ++ S+S + E NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+ ++VRLLG + + ++V E + + L ++L
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 111
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 29.6 bits (65), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 23 DFETIEDATNKFSTD-----NKLGEGGFGVL------------PNE-HEIAVKRL-SRSS 63
++E ED + D LGEG FG + PN ++AVK L S ++
Sbjct: 3 EYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 62
Query: 64 SQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+ ++ +E+ ++ + +H N++ LLG C + ++ EY L +L
Sbjct: 63 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 114
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 29.6 bits (65), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 23 DFETIEDATNKFSTD-----NKLGEGGFGVL------------PNE-HEIAVKRL-SRSS 63
++E ED + D LGEG FG + PN ++AVK L S ++
Sbjct: 14 EYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 73
Query: 64 SQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+ ++ +E+ ++ + +H N++ LLG C + ++ EY L +L
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 125
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 29.6 bits (65), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 13/97 (13%)
Query: 18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQG 66
E L +D E ++ + LG G FG + +AVK L ++
Sbjct: 13 ERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS 72
Query: 67 AQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILV 101
+ +E+ ++ + H+N+V LLG C + ++V
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 29.6 bits (65), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 17/84 (20%)
Query: 36 TDNK-LGEGGFGV-----LPNEHE-IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRL 88
TD K +G G FGV L + E +A+K++ Q + N E+ ++ KL H N+VRL
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRL 78
Query: 89 LGFCLEREEKI------LVYEYVP 106
F EK LV +YVP
Sbjct: 79 RYFFYSSGEKKDVVYLNLVLDYVP 102
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 29.6 bits (65), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 57 KRLSRSSSQGA--QEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
KR SS +G +EI EV ++ +++H N++ L + + +L+ E V L +FL
Sbjct: 61 KRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL 120
Query: 115 YEPEKQGQWDCSRRYKII 132
E E + + ++ K I
Sbjct: 121 AEKESLTEDEATQFLKQI 138
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 29.6 bits (65), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 23 DFETIEDATNKFSTD-----NKLGEGGFGVL------------PNE-HEIAVKRL-SRSS 63
++E ED + D LGEG FG + PN ++AVK L S ++
Sbjct: 6 EYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 65
Query: 64 SQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+ ++ +E+ ++ + +H N++ LLG C + ++ EY L +L
Sbjct: 66 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 117
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 29.6 bits (65), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 23 DFETIEDATNKFSTD-----NKLGEGGFGVL------------PNE-HEIAVKRL-SRSS 63
++E ED + D LGEG FG + PN ++AVK L S ++
Sbjct: 14 EYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 73
Query: 64 SQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+ ++ +E+ ++ + +H N++ LLG C + ++ EY L +L
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 125
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 29.6 bits (65), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 23 DFETIEDATNKFSTD-----NKLGEGGFGVL------------PNE-HEIAVKRL-SRSS 63
++E ED + D LGEG FG + PN ++AVK L S ++
Sbjct: 7 EYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 66
Query: 64 SQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+ ++ +E+ ++ + +H N++ LLG C + ++ EY L +L
Sbjct: 67 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 118
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 29.6 bits (65), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 23 DFETIEDATNKFSTD-----NKLGEGGFGVL------------PNE-HEIAVKRL-SRSS 63
++E ED + D LGEG FG + PN ++AVK L S ++
Sbjct: 14 EYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 73
Query: 64 SQGAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+ ++ +E+ ++ + +H N++ LLG C + ++ EY L +L
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 125
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 29.3 bits (64), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Query: 40 LGEGGFGVLP----------NEHEIAVKRL-SRSSSQGAQEINNEVVVVAKLQHINLVRL 88
LGEG FG + +AVK L + Q E+ ++ L H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 89 LGFCLEREEKI--LVYEYVPNKRLDNFL 114
G C ++ EK LV EYVP L ++L
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL 109
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 29.3 bits (64), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Query: 40 LGEGGFGVLP----------NEHEIAVKRL-SRSSSQGAQEINNEVVVVAKLQHINLVRL 88
LGEG FG + +AVK L + Q E+ ++ L H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 89 LGFCLEREEKI--LVYEYVPNKRLDNFL 114
G C ++ EK LV EYVP L ++L
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL 109
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 29.3 bits (64), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 33 KFSTDNKLGEGGFGVLPNEH-----EIAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
K+ K+GEG +GV+ A+K RL + E+ ++ +L+H N+
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 86 VRLLGFCLEREEKILVYEYV 105
V+L ++ +LV+E++
Sbjct: 63 VKLYDVIHTKKRLVLVFEHL 82
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 29.3 bits (64), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 33 KFSTDNKLGEGGFGVLPNEH-----EIAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
K+ K+GEG +GV+ A+K RL + E+ ++ +L+H N+
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 86 VRLLGFCLEREEKILVYEYV 105
V+L ++ +LV+E++
Sbjct: 63 VKLYDVIHTKKRLVLVFEHL 82
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 33 KFSTDNKLGEGGFGVLPNEH-----EIAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
K+ K+GEG +GV+ A+K RL + E+ ++ +L+H N+
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 86 VRLLGFCLEREEKILVYEYV 105
V+L ++ +LV+E++
Sbjct: 63 VKLYDVIHTKKRLVLVFEHL 82
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/94 (21%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 53 EIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL 110
E+AV+ + ++ +S Q++ EV ++ L H N+V+L + LV EY +
Sbjct: 41 EVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 111 DNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFL 144
++L + + + +++ I + C + F+
Sbjct: 101 FDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 29.3 bits (64), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 10/57 (17%)
Query: 40 LGEGGFG-VLPNEHEI-----AVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLG 90
+G GGFG V +H I +KR+ ++ + +E+ +AKL H+N+V G
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVK----ALAKLDHVNIVHYNG 71
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 29.3 bits (64), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/94 (21%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 53 EIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL 110
E+AV+ + ++ +S Q++ EV ++ L H N+V+L + LV EY +
Sbjct: 41 EVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 111 DNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFL 144
++L + + + +++ I + C + F+
Sbjct: 101 FDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 29.3 bits (64), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 14/81 (17%)
Query: 18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVLPNEHEIAV----------KRLSRSSSQGA 67
E+L F T D ++ +N +G G +G E +IAV K++ + +
Sbjct: 12 ENLYFQGSTKGDINQYYTLENTIGRGSWG----EVKIAVQKGTRIRRAAKKIPKYFVEDV 67
Query: 68 QEINNEVVVVAKLQHINLVRL 88
E+ ++ L H N++RL
Sbjct: 68 DRFKQEIEIMKSLDHPNIIRL 88
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 29.3 bits (64), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 24 FETIEDATNKFSTDNKLGEGGFG-VLPNEHE-----IAVKRLSRSSSQGAQ-EINNEVVV 76
++ ED + + + LG G F V+ E + +A+K +++ + +G + + NE+ V
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 77 VAKLQHINLVRL 88
+ K++H N+V L
Sbjct: 70 LHKIKHPNIVAL 81
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 29.3 bits (64), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 24 FETIEDATNKFSTDNKLGEGGFG-VLPNEHE-----IAVKRLSRSSSQGAQ-EINNEVVV 76
++ ED + + + LG G F V+ E + +A+K +++ + +G + + NE+ V
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 77 VAKLQHINLVRL 88
+ K++H N+V L
Sbjct: 70 LHKIKHPNIVAL 81
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 29.3 bits (64), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 13/88 (14%)
Query: 40 LGEGGFGVLP----------NEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRL 88
LGEG FG + +AVK L Q E+ ++ L H ++V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 89 LGFCLEREEKI--LVYEYVPNKRLDNFL 114
G C ++ EK LV EYVP L ++L
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL 104
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 28.9 bits (63), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 13/88 (14%)
Query: 40 LGEGGFGVLP----------NEHEIAVKRLSRSS-SQGAQEINNEVVVVAKLQHINLVRL 88
LGEG FG + +AVK L Q E+ ++ L H ++V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 89 LGFCLEREEKI--LVYEYVPNKRLDNFL 114
G C ++ EK LV EYVP L ++L
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL 103
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 28.9 bits (63), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 24 FETIEDATNKFSTDNKLGEGGFG-VLPNEHE-----IAVKRLSRSSSQGAQ-EINNEVVV 76
++ ED + + + LG G F V+ E + +A+K +++ + +G + + NE+ V
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 77 VAKLQHINLVRL 88
+ K++H N+V L
Sbjct: 70 LHKIKHPNIVAL 81
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 28.9 bits (63), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 23 DFETIEDATNKFSTDN-----KLGEGGFGVL------------PNEH-EIAVKRLSRSSS 64
++E ED +F D LGEG FG + P E +AVK L ++
Sbjct: 13 EYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 72
Query: 65 Q-GAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+ ++ +E+ ++ + +H N++ LLG C + ++ EY L +L
Sbjct: 73 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 124
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 28.9 bits (63), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 24 FETIEDATNKFSTDNKLGEGGFG-VLPNEHE-----IAVKRLSRSSSQGAQ-EINNEVVV 76
++ ED + + + LG G F V+ E + +A+K +++ + +G + + NE+ V
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAV 69
Query: 77 VAKLQHINLVRL 88
+ K++H N+V L
Sbjct: 70 LHKIKHPNIVAL 81
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 23 DFETIEDATNKFSTDN-----KLGEGGFGVL------------PNEH-EIAVKRLSRSSS 64
++E ED +F D LGEG FG + P E +AVK L ++
Sbjct: 10 EYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 69
Query: 65 Q-GAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+ ++ +E+ ++ + +H N++ LLG C + ++ EY L +L
Sbjct: 70 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 121
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Query: 53 EIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL 110
E+AVK + ++ +S Q++ EV + L H N+V+L + LV EY +
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEV 100
Query: 111 DNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFL 144
++L + + + +++ I + C + F+
Sbjct: 101 FDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFI 134
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQG 66
E L +D E ++ LG G FG + +AVK L ++
Sbjct: 13 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 72
Query: 67 AQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILV 101
+ +E+ ++ + H+N+V LLG C + ++V
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 72 NEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
E ++ + H N+VRL+G C +++ +V E V FL
Sbjct: 161 QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL 203
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 23 DFETIEDATNKFSTDN-----KLGEGGFGVL------------PNEH-EIAVKRLSRSSS 64
++E ED +F D LGEG FG + P E +AVK L ++
Sbjct: 8 EYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 67
Query: 65 Q-GAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+ ++ +E+ ++ + +H N++ LLG C + ++ EY L +L
Sbjct: 68 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 119
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 72 NEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
E ++ + H N+VRL+G C +++ +V E V FL
Sbjct: 161 QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL 203
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQG 66
E L +D E ++ LG G FG + +AVK L ++
Sbjct: 4 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 63
Query: 67 AQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILV 101
+ +E+ ++ + H+N+V LLG C + ++V
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 100
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQG 66
E L +D E ++ LG G FG + +AVK L ++
Sbjct: 15 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 74
Query: 67 AQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILV 101
+ +E+ ++ + H+N+V LLG C + ++V
Sbjct: 75 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 111
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQG 66
E L +D E ++ LG G FG + +AVK L ++
Sbjct: 4 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 63
Query: 67 AQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILV 101
+ +E+ ++ + H+N+V LLG C + ++V
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 100
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQG 66
E L +D E ++ LG G FG + +AVK L ++
Sbjct: 50 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 109
Query: 67 AQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILV 101
+ +E+ ++ + H+N+V LLG C + ++V
Sbjct: 110 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 146
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 13/97 (13%)
Query: 18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQG 66
E L +D E ++ + LG G FG + +AVK L ++
Sbjct: 14 ERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 73
Query: 67 AQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILV 101
+ +E+ ++ + H+N+V LLG C + ++V
Sbjct: 74 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 110
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 23 DFETIEDATNKFSTDN-----KLGEGGFGVL------------PNEH-EIAVKRLSRSSS 64
++E ED +F D LGEG FG + P E +AVK L ++
Sbjct: 67 EYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 126
Query: 65 Q-GAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+ ++ +E+ ++ + +H N++ LLG C + ++ EY L +L
Sbjct: 127 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 178
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQG 66
E L +D E ++ LG G FG + +AVK L ++
Sbjct: 4 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 63
Query: 67 AQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILV 101
+ +E+ ++ + H+N+V LLG C + ++V
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 100
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQG 66
E L +D E ++ LG G FG + +AVK L ++
Sbjct: 13 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 72
Query: 67 AQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILV 101
+ +E+ ++ + H+N+V LLG C + ++V
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E+V ++ L F+
Sbjct: 64 VKLLDVIHTENKLYLVFEHV-HQDLKTFM 91
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQG 66
E L +D E ++ LG G FG + +AVK L ++
Sbjct: 4 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 63
Query: 67 AQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILV 101
+ +E+ ++ + H+N+V LLG C + ++V
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 100
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQG 66
E L +D E ++ LG G FG + +AVK L ++
Sbjct: 13 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 72
Query: 67 AQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILV 101
+ +E+ ++ + H+N+V LLG C + ++V
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQG 66
E L +D E ++ LG G FG + +AVK L ++
Sbjct: 8 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 67
Query: 67 AQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILV 101
+ +E+ ++ + H+N+V LLG C + ++V
Sbjct: 68 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 104
>pdb|2GIA|B Chain B, Crystal Structures Of Trypanosoma Bruciei Mrp1MRP2
pdb|2GIA|D Chain D, Crystal Structures Of Trypanosoma Bruciei Mrp1MRP2
Length = 187
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 13/72 (18%)
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLY----EPEKQGQWDCSRRYKI 131
+ +L+H++L L+G C ER VP R++ Y E QG + +++
Sbjct: 65 ISVRLRHVDLAYLVGVCKER---------VPRHRMETKAYTLDFEKSAQGYHLHGKVHRV 115
Query: 132 IGGRGRDCSRNF 143
R D S F
Sbjct: 116 ASQRMEDWSVKF 127
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 32 NKFSTDNKLGEGGFGVL------------PNE-HEIAVKRL-SRSSSQGAQEINNEVVVV 77
++ LGEG FG + PN ++AVK L S ++ + ++ +E+ ++
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 78 AKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+ +H N++ LLG C + ++ EY L +L
Sbjct: 73 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 110
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQG 66
E L +D E ++ LG G FG + +AVK L ++
Sbjct: 6 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 65
Query: 67 AQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILV 101
+ +E+ ++ + H+N+V LLG C + ++V
Sbjct: 66 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 102
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQG 66
E L +D E ++ LG G FG + +AVK L ++
Sbjct: 15 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 74
Query: 67 AQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILV 101
+ +E+ ++ + H+N+V LLG C + ++V
Sbjct: 75 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 111
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVL-----------PNEHEIAVKRLSRSSSQG 66
E L +D E ++ LG G FG + +AVK L ++
Sbjct: 13 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 72
Query: 67 AQE-INNEVVVVAKL-QHINLVRLLGFCLEREEKILV 101
+ +E+ ++ + H+N+V LLG C + ++V
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E+V ++ L F+
Sbjct: 68 VKLLDVIHTENKLYLVFEHV-DQDLKKFM 95
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Query: 53 EIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL 110
E+AVK + ++ +S Q++ EV ++ L H N+V+L + LV EY +
Sbjct: 34 EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 93
Query: 111 DNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFL 144
++L + + +++ I + C + F+
Sbjct: 94 FDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFI 127
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 31 TNKFSTDNKLGEGGFGV------LPNEHEIAVKRLS--RSSSQGAQEINNEVVVVAKLQH 82
T+++ +G+G F V L HE A K ++ + S++ Q++ E + L+H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 83 INLVRLLGFCLEREEKILVYEYVPNKRL 110
N+VRL E LV++ V L
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGEL 90
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 38 NKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQ-EINNEVVVVAKLQHINLVRLLG 90
+KLGEG + + ++ +A+K + +GA EV ++ L+H N+V L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 91 FCLEREEKILVYEYVPNKRLDNFL 114
+ LV+EY+ +K L +L
Sbjct: 68 IIHTEKSLTLVFEYL-DKDLKQYL 90
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L +F+
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKDFM 92
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 28.1 bits (61), Expect = 1.6, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 8/104 (7%)
Query: 31 TNKFSTDNKLGEGGFGVLP--------NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQH 82
T ++ +LG+G F V+ E+ + + S++ Q++ E + L+H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 83 INLVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCS 126
N+VRL E L+++ V L + E + D S
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS 113
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 33 KFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGA-QEIN-NEVVVVAKLQHIN 84
K+ K+GEG +GV+ +A+K+ S ++I E+ ++ +L+H N
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 85 LVRLLGFCLEREEKILVYEY 104
LV LL + LV+EY
Sbjct: 64 LVNLLEVFRRKRRLHLVFEY 83
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 20/112 (17%)
Query: 23 DFETIEDATNKFSTDN-----KLGEGGFGVL------------PNEH-EIAVKRLSRSSS 64
++E ED +F D LGEG FG + P E +AVK L ++
Sbjct: 21 EYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 65 Q-GAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+ ++ +E+ ++ + +H N++ LLG C + ++ Y L +L
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYL 132
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
R794g Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
R794g Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
R794g Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
R794g Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 40 LGEGGFGVLP------NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCL 93
LG+G FG + + A+K++ R + + I +EV+++A L H +VR L
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 94 ER 95
ER
Sbjct: 73 ER 74
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
Wild- Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
Wild- Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
Wild- Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
Wild- Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
Wild- Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
Wild- Type Complexed With Atp
Length = 303
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 40 LGEGGFGVLP------NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCL 93
LG+G FG + + A+K++ R + + I +EV+++A L H +VR L
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 94 ER 95
ER
Sbjct: 73 ER 74
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 28.1 bits (61), Expect = 1.9, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Query: 32 NKFSTDNKLGEGGFGVLPNEHE------IAVKRLSRSSSQGAQEINNEVVVVAKLQHINL 85
+ + +LG G FGV+ E A K + + + E+ ++ L+H L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 86 VRLLGFCLEREEKILVYEYVPNKRL 110
V L + E +++YE++ L
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGEL 241
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 19/86 (22%)
Query: 18 ESLQFDFETIEDATNKFSTDNKLGEGGFGVLPNEHEIAVKRLSRS--------------- 62
E+L F ++ + K+ +G+G +GV+ +A++ +R+
Sbjct: 12 ENLYFQGGSLLELQKKYHLKGAIGQGSYGVV----RVAIENQTRAIRAIKIMNKNKIRQI 67
Query: 63 SSQGAQEINNEVVVVAKLQHINLVRL 88
+ + + I EV ++ KL H N+ RL
Sbjct: 68 NPKDVERIKTEVRLMKKLHHPNIARL 93
>pdb|2ZHG|A Chain A, Crystal Structure Of Soxr In Complex With Dna
pdb|2ZHH|A Chain A, Crystal Structure Of Soxr
Length = 154
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 40 LGEGGFGVLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQ 81
+GE FGVLP H ++ K + SSQ +E++ + + L+
Sbjct: 73 IGEA-FGVLPEGHTLSAKEWKQLSSQWREELDRRIHTLVALR 113
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 27.7 bits (60), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 96
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 27.7 bits (60), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 40 LGEGGFGVLP------NEHEIAVKRLSR---SSSQGAQEINNEVVVVAKLQHINLVRLLG 90
LGEG FG + + ++A+K +SR S + E+ + L+H ++++L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 91 FCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRY 129
+ ++V EY + D ++ E ++ + D RR+
Sbjct: 77 VITTPTDIVMVIEYAGGELFD-YIVEKKRMTE-DEGRRF 113
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKTFM 95
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 93
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 27.7 bits (60), Expect = 2.2, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Query: 32 NKFSTDNKLGEGGFGVLPNEHE------IAVKRLSRSSSQGAQEINNEVVVVAKLQHINL 85
+ + +LG G FGV+ E A K + + + E+ ++ L+H L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 86 VRLLGFCLEREEKILVYEYVPNKRL 110
V L + E +++YE++ L
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGEL 135
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 94
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Query: 40 LGEGGFG-VLPNEHE-----IAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCL 93
LG+G FG + H + +K L R + + EV V+ L+H N+++ +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 94 EREEKILVYEYVPNKRLDNFLYEPEKQGQW 123
+ + + EY+ L + + Q W
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMDSQYPW 107
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 92
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 94
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 92
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 93
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 92
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 92
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 91
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 92
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 91
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Query: 40 LGEGGFGVLPNEHEIAVKR------LSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCL 93
LG G FGV+ E A R ++ + NE+ ++ +L H L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 94 EREEKILVYEYV 105
++ E +L+ E++
Sbjct: 119 DKYEMVLILEFL 130
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 91
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 99
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 86 VRLLGFCLEREEKILVYEYV 105
V+LL + LV+E++
Sbjct: 67 VKLLDVIHTENKLYLVFEFL 86
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 92
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 95
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 92
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 92
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 91
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 96
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 93
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 93
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 95
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 94
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 86 VRLLGFCLEREEKILVYEYV 105
V+LL + LV+E++
Sbjct: 68 VKLLDVIHTENKLYLVFEFL 87
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 99
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 86 VRLLGFCLEREEKILVYEYV 105
V+LL + LV+E++
Sbjct: 66 VKLLDVIHTENKLYLVFEFL 85
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Query: 34 FSTDNKLGEGGFGVLPNEHE------IAVK--RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV+ +A+K RL + E+ ++ +L H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 86 VRLLGFCLEREEKILVYEYV 105
V+LL + LV+E++
Sbjct: 68 VKLLDVIHTENKLYLVFEFL 87
>pdb|2GID|B Chain B, Crystal Structures Of Trypanosoma Bruciei Mrp1/mrp2
pdb|2GID|D Chain D, Crystal Structures Of Trypanosoma Bruciei Mrp1/mrp2
pdb|2GID|K Chain K, Crystal Structures Of Trypanosoma Bruciei Mrp1/mrp2
pdb|2GID|J Chain J, Crystal Structures Of Trypanosoma Bruciei Mrp1/mrp2
pdb|2GJE|D Chain D, Structure Of A Guiderna-Binding Protein Complex Bound To A
Grna
Length = 187
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 13/72 (18%)
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRLDNFLY----EPEKQGQWDCSRRYKI 131
+ +L+H++L L+G C ER VP R + Y E QG + +++
Sbjct: 65 ISVRLRHVDLAYLVGVCKER---------VPRHRXETKAYTLDFEKSAQGYHLHGKVHRV 115
Query: 132 IGGRGRDCSRNF 143
R D S F
Sbjct: 116 ASQRXEDWSVKF 127
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 33 KFSTDNKLGEGGFGVL-----PNEHEI-AVKR--LSRSSSQGAQEINNEVVVVAKLQHIN 84
K+ K+GEG +G + HEI A+KR L E+ ++ +L+H N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 85 LVRLLGFCLEREEKILVYEY 104
+VRL ++ LV+E+
Sbjct: 63 IVRLHDVLHSDKKLTLVFEF 82
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 20/112 (17%)
Query: 23 DFETIEDATNKFSTDN-----KLGEGGFGVL------------PNEH-EIAVKRLSRSSS 64
++E ED +F D LGEG FG + P E +AVK L ++
Sbjct: 21 EYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 65 Q-GAQEINNEVVVVAKL-QHINLVRLLGFCLEREEKILVYEYVPNKRLDNFL 114
+ ++ +E+ ++ + +H N++ LLG C + ++ Y L +L
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYL 132
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
Query: 22 FDFETIEDATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEINNEVV 75
D + D ++++ +G G FGV + +AVK + R A + E++
Sbjct: 10 MDLPIMHD-SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAAN-VKREII 67
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEY 104
L+H N+VR L +V EY
Sbjct: 68 NHRSLRHPNIVRFKEVILTPTHLAIVMEY 96
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 33 KFSTDNKLGEGGFGVL-----PNEHEI-AVKR--LSRSSSQGAQEINNEVVVVAKLQHIN 84
K+ K+GEG +G + HEI A+KR L E+ ++ +L+H N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 85 LVRLLGFCLEREEKILVYEY 104
+VRL ++ LV+E+
Sbjct: 63 IVRLHDVLHSDKKLTLVFEF 82
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/94 (20%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Query: 53 EIAVKRLSRS--SSQGAQEINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL 110
E+AVK + ++ + Q++ EV ++ L H N+V+L + LV EY +
Sbjct: 42 EVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEV 101
Query: 111 DNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFL 144
++L + + + +++ I + C + ++
Sbjct: 102 FDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYI 135
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
Length = 303
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 40 LGEGGFGVLP------NEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLGFCL 93
LG+G FG + + A+K++ R + + I +EV ++A L H +VR L
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 94 ER 95
ER
Sbjct: 73 ER 74
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 26.9 bits (58), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 30 ATNKFSTDNKLGEGGFG-------VLPNEHEIAVKRLS-RSSSQGAQEIN-NEVVVVAKL 80
+ +++ KLGEG +G + NE +A+KR+ +G EV ++ +L
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNE-TVAIKRIRLEHEEEGVPGTAIREVSLLKEL 90
Query: 81 QHINLVRLLGFCLEREEKILVYEYVPN 107
QH N++ L L++EY N
Sbjct: 91 QHRNIIELKSVIHHNHRLHLIFEYAEN 117
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 26.9 bits (58), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/73 (20%), Positives = 35/73 (47%), Gaps = 14/73 (19%)
Query: 31 TNKFSTDNKLGEGGFGVLPNE------HEIAVKRLSRSS--------SQGAQEINNEVVV 76
+ K+ST + LG G FG + E+ VK + + ++ E+ +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 77 VAKLQHINLVRLL 89
+++++H N++++L
Sbjct: 83 LSRVEHANIIKVL 95
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 26.9 bits (58), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 30 ATNKFSTDNKLGEGGFGVL------PNEHEIAVKRLSRSSSQGAQEIN-NEVVVVAKLQH 82
++++F KLG G + + +A+K + S +G E+ ++ +L+H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 83 INLVRLLGFCLEREEKILVYEYVPN 107
N+VRL + LV+E++ N
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN 87
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 26.9 bits (58), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 40 LGEGGFGVLP------NEHEIAVKRLSRSSSQGAQE-INNEVVVVAKLQHINLVRLLGFC 92
LGEG +G + E +AVK + + E I E+ + A L H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 93 LEREEKILVYEY 104
E + L EY
Sbjct: 75 REGNIQYLFLEY 86
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 9/102 (8%)
Query: 18 ESLQFD-FETIEDATNKFSTDNKLGEGGFGVL--------PNEHEIAVKRLSRSSSQGAQ 68
E+L F T T+ + +LG+G F V+ E+ + + S++ Q
Sbjct: 16 ENLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQ 75
Query: 69 EINNEVVVVAKLQHINLVRLLGFCLEREEKILVYEYVPNKRL 110
++ E + L+H N+VRL E LV++ V L
Sbjct: 76 KLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL 117
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human
P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 29 DATNKFSTDNKLGEGGFG-VLPNEH-----EIAVKRLSRSSSQGAQEIN--NEVVVVAKL 80
D +K+ K+G+G FG V H ++A+K++ + + I E+ ++ L
Sbjct: 14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 73
Query: 81 QHINLVRLLGFC 92
+H N+V L+ C
Sbjct: 74 KHENVVNLIEIC 85
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 29 DATNKFSTDNKLGEGGFG-VLPNEH-----EIAVKRLSRSSSQGAQEIN--NEVVVVAKL 80
D +K+ K+G+G FG V H ++A+K++ + + I E+ ++ L
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 81 QHINLVRLLGFC 92
+H N+V L+ C
Sbjct: 75 KHENVVNLIEIC 86
>pdb|3FGW|A Chain A, One Chain Form Of The 66.3 Kda Protein
Length = 559
Score = 26.6 bits (57), Expect = 5.5, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 23 DFETIEDATNKFSTDNKLGEGG----FGVLPNEHEIAVKRLSRSSSQGAQEI 70
D E +E A NK +T LG G +LP H++ V + +S Q I
Sbjct: 181 DLEDLEPALNKTNTKPSLGSGSCSALIKLLPGGHDLLVAHNTWNSYQNMLRI 232
>pdb|3FBX|A Chain A, Crystal Structure Of The Lysosomal 66.3 Kda Protein From
Mouse Solved By S-Sad
Length = 559
Score = 26.6 bits (57), Expect = 5.5, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 23 DFETIEDATNKFSTDNKLGEGG----FGVLPNEHEIAVKRLSRSSSQGAQEI 70
D E +E A NK +T LG G +LP H++ V + +S Q I
Sbjct: 181 DLEDLEPALNKTNTKPSLGSGSXSALIKLLPGGHDLLVAHNTWNSYQNMLRI 232
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 29 DATNKFSTDNKLGEGGFG-VLPNEH-----EIAVKRLSRSSSQGAQEIN--NEVVVVAKL 80
D +K+ K+G+G FG V H ++A+K++ + + I E+ ++ L
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 81 QHINLVRLLGFC 92
+H N+V L+ C
Sbjct: 75 KHENVVNLIEIC 86
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint
And Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 29 DATNKFSTDNKLGEGGFG-VLPNEH-----EIAVKRLSRSSSQGAQEIN--NEVVVVAKL 80
D +K+ K+G+G FG V H ++A+K++ + + I E+ ++ L
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 81 QHINLVRLLGFC 92
+H N+V L+ C
Sbjct: 75 KHENVVNLIEIC 86
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 33 KFSTDNKLGEGGFGVLPNEHE-----IAVKRLSRSS-SQGAQEIN-NEVVVVAKLQHINL 85
K+ K+GEG +GV+ + +A+KR+ + +G E+ ++ +L H N+
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 86 VRLLGFCLEREEKILVYEYV 105
V L+ LV+E++
Sbjct: 82 VSLIDVIHSERCLTLVFEFM 101
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 26.6 bits (57), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 33 KFSTDNKLGEGGFGVLPNEHE-----IAVKRLSRSS-SQGAQEIN-NEVVVVAKLQHINL 85
K+ K+GEG +GV+ + +A+KR+ + +G E+ ++ +L H N+
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 86 VRLLGFCLEREEKILVYEYV 105
V L+ LV+E++
Sbjct: 82 VSLIDVIHSERCLTLVFEFM 101
>pdb|3M8Z|A Chain A, Phosphopentomutase From Bacillus Cereus Bound With
Ribose-5-Phosphate
Length = 392
Score = 26.2 bits (56), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 43 GGFGVLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHI 83
G F PN H+ A+K R+ ++ + +V+ + K+ I
Sbjct: 204 GNFTRTPNRHDYALKPFGRTVMNELKDSDYDVIAIGKISDI 244
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 26.2 bits (56), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Query: 22 FDFETIEDATNKFSTDNKLGEGGFGVLP------NEHEIAVKRLSRSSSQGAQEINNEVV 75
D + D ++++ +G G FGV + +AVK + R ++ + + E++
Sbjct: 11 LDMPIMHD-SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID-ENVQREII 68
Query: 76 VVAKLQHINLVRLLGFCLEREEKILVYEY 104
L+H N+VR L ++ EY
Sbjct: 69 NHRSLRHPNIVRFKEVILTPTHLAIIMEY 97
>pdb|3UN2|A Chain A, Phosphopentomutase T85q Variant Enzyme
pdb|3UN2|B Chain B, Phosphopentomutase T85q Variant Enzyme
pdb|3UN2|C Chain C, Phosphopentomutase T85q Variant Enzyme
pdb|3UN3|A Chain A, Phosphopentomutase T85q Variant Soaked With Glucose
1,6-Bisphosphate
pdb|3UN3|B Chain B, Phosphopentomutase T85q Variant Soaked With Glucose
1,6-Bisphosphate
pdb|3UN3|C Chain C, Phosphopentomutase T85q Variant Soaked With Glucose
1,6-Bisphosphate
Length = 399
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 43 GGFGVLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHI 83
G F PN H+ A+K R+ ++ + +V+ + K+ I
Sbjct: 209 GNFTRTPNRHDYALKPFGRTVMNELKDSDYDVIAIGKISDI 249
>pdb|3TX0|A Chain A, Unphosphorylated Bacillus Cereus Phosphopentomutase In A
P212121 Crystal Form
Length = 399
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 43 GGFGVLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHI 83
G F PN H+ A+K R+ ++ + +V+ + K+ I
Sbjct: 209 GNFTRTPNRHDYALKPFGRTVMNELKDSDYDVIAIGKISDI 249
>pdb|3UN5|A Chain A, Bacillus Cereus Phosphopentomutase T85e Variant
pdb|3UN5|B Chain B, Bacillus Cereus Phosphopentomutase T85e Variant
pdb|3UN5|C Chain C, Bacillus Cereus Phosphopentomutase T85e Variant
pdb|3UN5|D Chain D, Bacillus Cereus Phosphopentomutase T85e Variant
pdb|3UN5|E Chain E, Bacillus Cereus Phosphopentomutase T85e Variant
pdb|3UN5|F Chain F, Bacillus Cereus Phosphopentomutase T85e Variant
pdb|3UNY|A Chain A, Bacillus Cereus Phosphopentomutase T85e Variant Soaked
With Glucose 1, 6-Bisphosphate
pdb|3UNY|B Chain B, Bacillus Cereus Phosphopentomutase T85e Variant Soaked
With Glucose 1, 6-Bisphosphate
pdb|3UNY|C Chain C, Bacillus Cereus Phosphopentomutase T85e Variant Soaked
With Glucose 1, 6-Bisphosphate
pdb|3UNY|D Chain D, Bacillus Cereus Phosphopentomutase T85e Variant Soaked
With Glucose 1, 6-Bisphosphate
pdb|3UNY|E Chain E, Bacillus Cereus Phosphopentomutase T85e Variant Soaked
With Glucose 1, 6-Bisphosphate
pdb|3UNY|F Chain F, Bacillus Cereus Phosphopentomutase T85e Variant Soaked
With Glucose 1, 6-Bisphosphate
Length = 399
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 43 GGFGVLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHI 83
G F PN H+ A+K R+ ++ + +V+ + K+ I
Sbjct: 209 GNFTRTPNRHDYALKPFGRTVMNELKDSDYDVIAIGKISDI 249
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 10/84 (11%)
Query: 40 LGEGGFGVL----PNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHINLVRLLG----- 90
+G G +G + +E +AVK S ++ Q N + V ++H N+ R +
Sbjct: 21 IGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKN-IYRVPLMEHDNIARFIVGDERV 79
Query: 91 FCLEREEKILVYEYVPNKRLDNFL 114
R E +LV EY PN L +L
Sbjct: 80 TADGRMEYLLVMEYYPNGSLXKYL 103
>pdb|3M8W|A Chain A, Phosphopentomutase From Bacillus Cereus
pdb|3M8W|B Chain B, Phosphopentomutase From Bacillus Cereus
pdb|3M8W|C Chain C, Phosphopentomutase From Bacillus Cereus
pdb|3M8Y|A Chain A, Phosphopentomutase From Bacillus Cereus After
Glucose-1,6-Bisphosphate Activation
pdb|3M8Y|B Chain B, Phosphopentomutase From Bacillus Cereus After
Glucose-1,6-Bisphosphate Activation
pdb|3M8Y|C Chain C, Phosphopentomutase From Bacillus Cereus After
Glucose-1,6-Bisphosphate Activation
pdb|3OT9|A Chain A, Phosphopentomutase From Bacillus Cereus Bound To
Glucose-1,6- Bisphosphate
pdb|3OT9|B Chain B, Phosphopentomutase From Bacillus Cereus Bound To
Glucose-1,6- Bisphosphate
pdb|3OT9|C Chain C, Phosphopentomutase From Bacillus Cereus Bound To
Glucose-1,6- Bisphosphate
pdb|3M8Z|B Chain B, Phosphopentomutase From Bacillus Cereus Bound With
Ribose-5-Phosphate
pdb|3M8Z|C Chain C, Phosphopentomutase From Bacillus Cereus Bound With
Ribose-5-Phosphate
pdb|3TWZ|A Chain A, Phosphorylated Bacillus Cereus Phosphopentomutase In Space
Group P212121
pdb|3UO0|A Chain A, Phosphorylated Bacillus Cereus Phosphopentomutase Soaked
With Glucose 1,6-Bisphosphate
pdb|3UO0|B Chain B, Phosphorylated Bacillus Cereus Phosphopentomutase Soaked
With Glucose 1,6-Bisphosphate
pdb|3UO0|C Chain C, Phosphorylated Bacillus Cereus Phosphopentomutase Soaked
With Glucose 1,6-Bisphosphate
Length = 399
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 43 GGFGVLPNEHEIAVKRLSRSSSQGAQEINNEVVVVAKLQHI 83
G F PN H+ A+K R+ ++ + +V+ + K+ I
Sbjct: 209 GNFTRTPNRHDYALKPFGRTVMNELKDSDYDVIAIGKISDI 249
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 25.8 bits (55), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 14/70 (20%)
Query: 29 DATNKFSTDNKLGEGGFGVLPNEHEIAV----------KRLSRSSSQGAQEINNEVVVVA 78
D ++ +N +G G +G E +IAV K++ + + E+ ++
Sbjct: 6 DINQYYTLENTIGRGSWG----EVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMK 61
Query: 79 KLQHINLVRL 88
L H N++RL
Sbjct: 62 SLDHPNIIRL 71
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 25.8 bits (55), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 14/66 (21%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 29 DATNKFSTDNKLGEGGFGVLPN------EHEIAVKRLSRSSSQGAQEINNEVVVVAKLQH 82
D +++ LG GG G++ + + +A+K++ + Q + E+ ++ +L H
Sbjct: 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDH 67
Query: 83 INLVRL 88
N+V++
Sbjct: 68 DNIVKV 73
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 25.8 bits (55), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 52/120 (43%), Gaps = 9/120 (7%)
Query: 34 FSTDNKLGEGGFGVLP------NEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHIN 84
+ + LG G FG + H++AVK L+R S +I E+ + +H +
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 85 LVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFL 144
+++L + +V EYV L +++ + + + + R ++ I C R+ +
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV 132
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 25.8 bits (55), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 52/120 (43%), Gaps = 9/120 (7%)
Query: 34 FSTDNKLGEGGFGVLP------NEHEIAVKRLSRS---SSQGAQEINNEVVVVAKLQHIN 84
+ + LG G FG + H++AVK L+R S +I E+ + +H +
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 85 LVRLLGFCLEREEKILVYEYVPNKRLDNFLYEPEKQGQWDCSRRYKIIGGRGRDCSRNFL 144
+++L + +V EYV L +++ + + + + R ++ I C R+ +
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV 132
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 25.8 bits (55), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGV-------LPNEHEIAVK-RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV L E K RL + E+ ++ +L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 92
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 25.8 bits (55), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 9/89 (10%)
Query: 34 FSTDNKLGEGGFGV-------LPNEHEIAVK-RLSRSSSQGAQEINNEVVVVAKLQHINL 85
F K+GEG +GV L E K RL + E+ ++ +L H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 86 VRLLGFCLEREEKILVYEYVPNKRLDNFL 114
V+LL + LV+E++ ++ L F+
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM 91
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 25.8 bits (55), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 19/85 (22%)
Query: 39 KLGEGGFGVL-----PNEH-EIAVKRLSRSS-------------SQGAQEINNEVVVVAK 79
KLG G +G + N H E A+K + +S + +EI NE+ ++
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 80 LQHINLVRLLGFCLEREEKILVYEY 104
L H N+++L +++ LV E+
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEF 127
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.136 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,279,095
Number of Sequences: 62578
Number of extensions: 166259
Number of successful extensions: 866
Number of sequences better than 100.0: 546
Number of HSP's better than 100.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 229
Number of HSP's that attempted gapping in prelim test: 506
Number of HSP's gapped (non-prelim): 546
length of query: 146
length of database: 14,973,337
effective HSP length: 90
effective length of query: 56
effective length of database: 9,341,317
effective search space: 523113752
effective search space used: 523113752
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 46 (22.3 bits)