BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 048151
         (164 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1CFE|A Chain A, P14a, Nmr, 20 Structures
          Length = 135

 Score =  130 bits (328), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/136 (49%), Positives = 85/136 (62%), Gaps = 4/136 (2%)

Query: 28  TQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHYGENLAWAD 87
           + Q Y+ +HN+AR  VG+G  M+WD  L   A +YA     DC + HS +  GENLA   
Sbjct: 3   SPQDYLAVHNDARAQVGVGP-MSWDANLASRAQNYANSRAGDCNLIHSGA--GENLAKGG 59

Query: 88  YDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFI 147
            DFT    V++WV E+  Y+Y +N C   + C HYTQVVWR SVRLGC + RCNN   FI
Sbjct: 60  GDFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWFI 119

Query: 148 AICNYDPPGNAAGERP 163
           + CNYDP GN  G+RP
Sbjct: 120 S-CNYDPVGNWIGQRP 134


>pdb|1RC9|A Chain A, Crystal Structure Of Stecrisp, A Member Of Crisp Family
           From Trimeresurus Stejnegeri Refined At 1.6 Angstroms
           Resolution: Structual Relationship Of The Two Domains
          Length = 221

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 67/146 (45%), Gaps = 17/146 (11%)

Query: 29  QQRYVHLHNEARRNVGIG----IGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHY----- 79
           Q   V LHN  RR+V       + M W     D+A  +A +    CI  HS         
Sbjct: 15  QNEIVDLHNSLRRSVNPTASNMLRMEWYPEAADNAERWAYR----CIESHSSYESRVIEG 70

Query: 80  ---GENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCA 136
              GEN+  + Y      I+  W DE + + Y      PN + GHYTQ+VW KS R+GCA
Sbjct: 71  IKCGENIYMSPYPMKWTDIIHAWHDEYKDFKYGVGADPPNAVTGHYTQIVWYKSYRIGCA 130

Query: 137 KERC-NNNHQFIAICNYDPPGNAAGE 161
              C ++ + +  +C Y P GN  G+
Sbjct: 131 AAYCPSSPYSYFFVCQYCPAGNFIGK 156


>pdb|3Q2R|A Chain A, Crystal Structure Of Sglipr1 Soaked With Zinc Chloride
 pdb|3Q2U|A Chain A, Structure Of Human Glioma Pathogenesis-Related Protein 1
           Reveals Unique Loops And Surface Motifs
          Length = 205

 Score = 70.5 bits (171), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 68/145 (46%), Gaps = 22/145 (15%)

Query: 33  VHLHNEARRNVGIG----IGMTWDKTLEDHAHSYAQ--------KLKVDCIIEHSVSHYG 80
           V +HN+ R  V       + MTWD  L   A ++A         +LK    +  + +  G
Sbjct: 23  VRIHNKFRSEVKPTASDMLYMTWDPALAQIAKAWASNCQFSHNTRLKPPHKLHPNFTSLG 82

Query: 81  ENLAWADYD-FTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKER 139
           EN+       F+V   +  W DE Q YD+ +  C   ++CGHYTQVVW  S ++GCA + 
Sbjct: 83  ENIWTGSVPIFSVSSAITNWYDEIQDYDFKTRIC--KKVCGHYTQVVWADSYKVGCAVQF 140

Query: 140 CNNNHQFIA-------ICNYDPPGN 157
           C     F A       ICNY P GN
Sbjct: 141 CPKVSGFDALSNGAHFICNYGPGGN 165


>pdb|2DDA|A Chain A, Crystal Structure Of Pseudechetoxin From Pseudechis
           Australis
 pdb|2DDA|B Chain B, Crystal Structure Of Pseudechetoxin From Pseudechis
           Australis
 pdb|2DDA|C Chain C, Crystal Structure Of Pseudechetoxin From Pseudechis
           Australis
 pdb|2DDA|D Chain D, Crystal Structure Of Pseudechetoxin From Pseudechis
           Australis
          Length = 211

 Score = 70.1 bits (170), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 17/145 (11%)

Query: 29  QQRYVHLHNEARRNVGIG----IGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHY----- 79
           Q+  V  HN  RR+V       + M W+     +A  +A +    C   HS  +      
Sbjct: 7   QKEIVDKHNALRRSVKPTARNMLQMKWNSRAAQNAKRWANR----CTFAHSPPNKRTVGK 62

Query: 80  ---GENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCA 136
              GEN+  +   F    +V+ W DE + + Y      P  + GHYTQVVW KS  +GCA
Sbjct: 63  LRCGENIFMSSQPFPWSGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSYLIGCA 122

Query: 137 KERCNNNHQFIAICNYDPPGNAAGE 161
             +C+++ +++ +C Y P GN  G 
Sbjct: 123 SAKCSSS-KYLYVCQYCPAGNIRGS 146


>pdb|2DDB|A Chain A, Crystal Structure Of Pseudecin From Pseudechis
           Porphyriacus
 pdb|2DDB|B Chain B, Crystal Structure Of Pseudecin From Pseudechis
           Porphyriacus
 pdb|2DDB|C Chain C, Crystal Structure Of Pseudecin From Pseudechis
           Porphyriacus
 pdb|2DDB|D Chain D, Crystal Structure Of Pseudecin From Pseudechis
           Porphyriacus
 pdb|2EPF|A Chain A, Crystal Structure Of Zinc-Bound Pseudecin From Pseudechis
           Porphyriacus
 pdb|2EPF|B Chain B, Crystal Structure Of Zinc-Bound Pseudecin From Pseudechis
           Porphyriacus
 pdb|2EPF|C Chain C, Crystal Structure Of Zinc-Bound Pseudecin From Pseudechis
           Porphyriacus
 pdb|2EPF|D Chain D, Crystal Structure Of Zinc-Bound Pseudecin From Pseudechis
           Porphyriacus
          Length = 210

 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 9/141 (6%)

Query: 29  QQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHY--------G 80
           Q+  V  HN  RR+V              HA   A++    C   HS  +         G
Sbjct: 6   QKEIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWADRCTFAHSPPNTRTVGKLRCG 65

Query: 81  ENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERC 140
           EN+  +   F    +V+ W DE + + Y      P  + GHYTQVVW KS  +GCA  +C
Sbjct: 66  ENIFMSSQPFPWSGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLIGCASAKC 125

Query: 141 NNNHQFIAICNYDPPGNAAGE 161
           +++ +++ +C Y P GN  G 
Sbjct: 126 SSS-KYLYVCQYCPAGNIRGS 145


>pdb|1SMB|A Chain A, Crystal Structure Of Golgi-Associated Pr-1 Protein
          Length = 154

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 8/146 (5%)

Query: 23  SANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSV----SH 78
           SA+       +  HNE R+  G+   +   K L   A  Y++ L    I++HS       
Sbjct: 4   SASKQFHNEVLKAHNEYRQKHGVPP-LKLXKNLNREAQQYSEALASTRILKHSPESSRGQ 62

Query: 79  YGENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKE 138
            GENLAWA YD T   +   W  E    +YN          GH+T +VW+ + ++G  K 
Sbjct: 63  XGENLAWASYDQTGKEVADRWYSE--IKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKA 120

Query: 139 RCNNNHQFIAICNYDPPGNAAGERPF 164
             ++   F+ +  Y P GN   E  F
Sbjct: 121 SASDGSSFV-VARYFPAGNVVNEGFF 145


>pdb|4AIW|A Chain A, Gapr-1 With Bound Inositol Hexakisphosphate
          Length = 154

 Score = 67.0 bits (162), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 8/146 (5%)

Query: 23  SANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHY--- 79
           SA+       +  HNE R+  G+   +   K L   A  Y++ L    I++HS       
Sbjct: 4   SASKQFHNEVLKAHNEYRQKHGVPP-LKLXKNLNREAQQYSEALASTRILKHSPESSRGQ 62

Query: 80  -GENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKE 138
            GENLAWA YD T   +   W  E    +YN          GH+T +VW+ + ++G  K 
Sbjct: 63  CGENLAWASYDQTGKEVADRWYSE--IKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKA 120

Query: 139 RCNNNHQFIAICNYDPPGNAAGERPF 164
             ++   F+ +  Y P GN   E  F
Sbjct: 121 SASDGSSFV-VARYFPAGNVVNEGFF 145


>pdb|1XTA|A Chain A, Crystal Structure Of Natrin, A Snake Venom Crisp From
           Taiwan Cobra (Naja Atra)
 pdb|1XTA|B Chain B, Crystal Structure Of Natrin, A Snake Venom Crisp From
           Taiwan Cobra (Naja Atra)
          Length = 221

 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 9/149 (6%)

Query: 22  SSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHY-- 79
           S+     Q+  V LHN  RR V               A S A++    C + HS  +   
Sbjct: 8   STRRKKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWANTCSLNHSPDNLRV 67

Query: 80  ------GENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRL 133
                 GE++  +    T   I+ +W DE + + Y      P  + GHYTQ+VW ++ R 
Sbjct: 68  LEGIQCGESIYMSSNARTWTEIIHLWHDEYKNFVYGVGASPPGSVTGHYTQIVWYQTYRA 127

Query: 134 GCAKERCNNNH-QFIAICNYDPPGNAAGE 161
           GCA   C ++   +  +C Y P GN  G+
Sbjct: 128 GCAVSYCPSSAWSYFYVCQYCPSGNFQGK 156


>pdb|1WVR|A Chain A, Crystal Structure Of A Crisp Family Ca-Channel Blocker
           Derived From Snake Venom
          Length = 221

 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 60/142 (42%), Gaps = 9/142 (6%)

Query: 29  QQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVS--------HYG 80
           Q   + LHN  RR+V               A + A++    CI  HS            G
Sbjct: 15  QNEIIDLHNSLRRSVNPTASNMLKMEWYPEAAANAERWAYRCIESHSSRDSRVIGGIKCG 74

Query: 81  ENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRLGCAKERC 140
           EN+  A Y      I+  W  E + + Y       + + GHYTQ+VW KS R GCA   C
Sbjct: 75  ENIYMATYPAKWTDIIHAWHGEYKDFKYGVGAVPSDAVIGHYTQIVWYKSYRAGCAAAYC 134

Query: 141 -NNNHQFIAICNYDPPGNAAGE 161
            ++ + +  +C Y P GN  G+
Sbjct: 135 PSSKYSYFYVCQYCPAGNIIGK 156


>pdb|1XX5|A Chain A, Crystal Structure Of Natrin From Naja Atra Snake Venom
 pdb|1XX5|B Chain B, Crystal Structure Of Natrin From Naja Atra Snake Venom
 pdb|1XX5|C Chain C, Crystal Structure Of Natrin From Naja Atra Snake Venom
 pdb|2GIZ|A Chain A, Structural And Functional Analysis Of Natrin, A Member Of
           Crisp-3 Family Blocks A Variety Of Ion Channels
 pdb|2GIZ|B Chain B, Structural And Functional Analysis Of Natrin, A Member Of
           Crisp-3 Family Blocks A Variety Of Ion Channels
 pdb|3MZ8|A Chain A, Crystal Structure Of Zinc-Bound Natrin From Naja Atra
 pdb|3MZ8|B Chain B, Crystal Structure Of Zinc-Bound Natrin From Naja Atra
          Length = 221

 Score = 62.8 bits (151), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 9/149 (6%)

Query: 22  SSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEHSVSHY-- 79
           S+     Q+  V LHN  RR V               A S A++    C + HS  +   
Sbjct: 8   STRRKKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWANTCSLNHSPDNLRV 67

Query: 80  ------GENLAWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQMCGHYTQVVWRKSVRL 133
                 GE++  +    T   I+ +W DE + + Y      P  + GHYTQ+VW ++ R 
Sbjct: 68  LEGIQCGESIYMSSNARTWTEIIHLWHDEYKNFVYGVGANPPGSVTGHYTQIVWYQTYRA 127

Query: 134 GCAKERCNNNH-QFIAICNYDPPGNAAGE 161
           GCA   C ++   +  +C Y P GN  G+
Sbjct: 128 GCAVSYCPSSAWSYFYVCQYCPSGNFQGK 156


>pdb|1U53|A Chain A, Novel X-Ray Structure Of Na-Asp-2, A Pr-1 Protein From The
           Nematode Parasite Necator Americanus And A Vaccine
           Antigen For Human Hookworm Infection
          Length = 196

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 35/163 (21%)

Query: 28  TQQRYVHLHNEARRNVGIGIG----------------MTWDKTLEDHAHSYAQKLKVDCI 71
            +Q+++ +HN  R +V +G                  M +D  +E  A + A++    C+
Sbjct: 16  ARQKFLEMHNSLRSSVALGQAKDGAGGNAPKAAKMKTMAYDCEVEKTAMNNAKQ----CV 71

Query: 72  IEHSVSH----YGENL-----AWADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQM---- 118
            +HS  +     GEN+     +  D     +   K W  E        N      +    
Sbjct: 72  FKHSQPNQRKGLGENIFMSSDSGMDKAKAAEQASKAWFGELAEKGVGQNLKLTGGLFSRG 131

Query: 119 CGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAGE 161
            GHYTQ+VW+++V+LGC  E C+N      +C Y P GN  G+
Sbjct: 132 VGHYTQMVWQETVKLGCYVEACSN--MCYVVCQYGPAGNMMGK 172


>pdb|2VZN|A Chain A, Crystal Structure  Of The Major  Allergen From Fire Ant
           Venom, Sol I 3
 pdb|2VZN|B Chain B, Crystal Structure  Of The Major  Allergen From Fire Ant
           Venom, Sol I 3
          Length = 218

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 70/169 (41%), Gaps = 38/169 (22%)

Query: 26  NATQQRYVHLHNEARRNVGIGIGM----------------TWDKTLEDHAHSYAQKLKVD 69
           +A +   V+ HNE R+ V  G  M                TWD  L   A  +A +    
Sbjct: 40  DAEKDAIVNKHNELRQRVASGKEMRGTNGPQPPAVKMPNLTWDPELATIAQRWANQ---- 95

Query: 70  CIIEHSVSH------YGENLAWADYD----FTVDHIVKMWVDEKQFYDYNSNTCAPNQ-- 117
           C  EH           G+N+A          T + ++ +W +E + +D    +  P+   
Sbjct: 96  CTFEHDACRNVERFAVGQNIAATSSSGKNKSTPNEMILLWYNEVKDFDNRWISSFPSDDN 155

Query: 118 ---MCGHYTQVVWRKSVRLGCAK---ERCNNNHQFIAICNYDPPGNAAG 160
                GHYTQ+VW K+ ++GC +   +  +N  +   +CNY P GN  G
Sbjct: 156 ILMKVGHYTQIVWAKTTKIGCGRIMFKEPDNWTKHYLVCNYGPAGNVLG 204


>pdb|3NT8|A Chain A, Crystal Structure Of Na-Asp-1
 pdb|3NT8|B Chain B, Crystal Structure Of Na-Asp-1
          Length = 424

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 36/166 (21%)

Query: 26  NATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKV--DCIIEHSVSHYGENL 83
           ++ +  ++ +HNE R +V  G+       L  +A   A+ LK+  DC +E S   +G   
Sbjct: 235 DSVRDTFLSVHNEFRSSVARGL---EPDALGGNAPKAAKMLKMVYDCEVEASAIRHGNKC 291

Query: 84  AWA----------------------DYDFTVDHIVKMWVDEKQFYDYNSN---TCA---- 114
            +                       D +       ++W +E + Y    +   T A    
Sbjct: 292 VYQHSHGEDRPGLGENIYKTSVLKFDKNKAAKQASQLWWNELKEYGVGPSNVLTTALWNR 351

Query: 115 PNQMCGHYTQVVWRKSVRLGCAKERCNNNHQFIAICNYDPPGNAAG 160
           PN   GHYTQ+ W  + +LGCA   CN+      +C Y P GN  G
Sbjct: 352 PNMQIGHYTQMAWDTTYKLGCAVVFCNDFT--FGVCQYGPGGNYMG 395



 Score = 29.3 bits (64), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 58/147 (39%), Gaps = 35/147 (23%)

Query: 22  SSANNATQQRYVHLHNEARRNVGIGIGMTWDKTLEDHAHSYAQKLKVDCIIEH------- 74
           S   ++ +Q ++  HN ARR V  G+  +    L    + Y  KL  DC +E        
Sbjct: 30  SGITDSDRQAFLDFHNNARRRVAKGLEDSNSGKLNPAKNMY--KLSWDCAMEQQLQDAIQ 87

Query: 75  -------SVSHYGEN-LAWADYDFTVDHIVKM-------WVDEKQFYDYNSNTCAP-NQM 118
                   +    +N ++W+      D  VK+       W   K+      N   P N+ 
Sbjct: 88  SCPSGFAGIQGVAQNTMSWSSSGGYPDPSVKIEPTLSGWWSGAKK------NGVGPDNKY 141

Query: 119 CGH----YTQVVWRKSVRLGCAKERCN 141
            G     ++ +V+ ++ +LGCA + C 
Sbjct: 142 TGGGLFAFSNMVYSETTKLGCAYKVCG 168


>pdb|1QNX|A Chain A, Ves V 5, An Allergen From Vespula Vulgaris Venom
          Length = 209

 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 27/162 (16%)

Query: 29  QQRYVHLHNEARRNVGIGI----------------GMTWDKTLEDHAHSYAQKLKVDCII 72
           +Q  +  HN+ R+ +  G+                 + W+  L   A  +A + +     
Sbjct: 46  KQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWANQCQYGHDT 105

Query: 73  EHSVSHY--GENLAW-----ADYDFTVDHIVKMWVDEKQFYDYNSNTCAPNQM-CGHYTQ 124
              V+ Y  G+N+A      A YD  V  +VKMW DE + Y+        + +  GHYTQ
Sbjct: 106 CRDVAKYQVGQNVALTGSTAAKYDDPV-KLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQ 164

Query: 125 VVWRKSVRLGCAKERCNNN--HQFIAICNYDPPGNAAGERPF 164
           +VW  +  +GC   +      H+   +CNY P GN   E  +
Sbjct: 165 MVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGNFKNEELY 206


>pdb|3NZQ|A Chain A, Crystal Structure Of Biosynthetic Arginine Decarboxylase
           Adc (Spea) From Escherichia Coli, Northeast Structural
           Genomics Consortium Target Er600
 pdb|3NZQ|B Chain B, Crystal Structure Of Biosynthetic Arginine Decarboxylase
           Adc (Spea) From Escherichia Coli, Northeast Structural
           Genomics Consortium Target Er600
          Length = 666

 Score = 27.3 bits (59), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 17/90 (18%)

Query: 4   INSLAI--FHLVVLAARIH-LSSANNATQQRYVHLHNEARR----NVGIGIGMTWDKTLE 56
           ++SL +  FHL    A I  +++    + + YV LH         +VG G+G+ ++ T  
Sbjct: 263 LDSLQLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGT-- 320

Query: 57  DHAHSYAQKLKVDCIIEHSVSHYGENLAWA 86
                   + + DC + + ++ Y  N+ WA
Sbjct: 321 --------RSQSDCSVNYGLNEYANNIIWA 342


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.322    0.134    0.438 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,451,646
Number of Sequences: 62578
Number of extensions: 215118
Number of successful extensions: 473
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 442
Number of HSP's gapped (non-prelim): 18
length of query: 164
length of database: 14,973,337
effective HSP length: 91
effective length of query: 73
effective length of database: 9,278,739
effective search space: 677347947
effective search space used: 677347947
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.7 bits)