Query 048152
Match_columns 104
No_of_seqs 110 out of 429
Neff 5.0
Searched_HMMs 13730
Date Mon Mar 25 11:33:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048152.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/048152hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2cjja1 a.4.1.3 (A:8-70) Radia 99.9 6.2E-24 4.5E-28 132.2 7.9 62 9-71 2-63 (63)
2 d2cqqa1 a.4.1.3 (A:8-66) DnaJ 99.9 7.9E-23 5.8E-27 127.3 7.4 59 8-69 1-59 (59)
3 d2cqra1 a.4.1.3 (A:7-66) DnaJ 99.7 1E-16 7.3E-21 98.1 6.6 51 6-57 10-60 (60)
4 d1x41a1 a.4.1.1 (A:8-54) Trans 99.2 4.5E-11 3.2E-15 69.8 6.4 44 9-56 2-45 (47)
5 d2cu7a1 a.4.1.3 (A:8-72) MYSM1 99.1 6.4E-11 4.7E-15 72.2 6.8 48 8-60 2-49 (65)
6 d2iw5b1 a.4.1.3 (B:376-440) RE 99.1 5.7E-11 4.2E-15 72.7 6.0 47 7-58 4-50 (65)
7 d1xc5a1 a.4.1.3 (A:413-480) Nu 99.0 1E-10 7.4E-15 72.3 3.6 47 6-57 15-61 (68)
8 d1gv2a2 a.4.1.3 (A:144-190) c- 99.0 3.3E-10 2.4E-14 66.1 5.3 45 9-58 2-46 (47)
9 d1guua_ a.4.1.3 (A:) c-Myb, DN 99.0 8.2E-10 6E-14 64.7 6.4 46 9-58 2-47 (50)
10 d1gvda_ a.4.1.3 (A:) c-Myb, DN 98.9 1.4E-09 9.9E-14 64.5 5.7 44 9-56 4-47 (52)
11 d1igna1 a.4.1.6 (A:360-445) DN 98.9 2.3E-10 1.7E-14 74.3 2.2 48 9-57 2-51 (86)
12 d2crga1 a.4.1.3 (A:8-64) Metas 98.8 4.7E-09 3.4E-13 63.2 5.5 42 9-55 2-44 (57)
13 d1ug2a_ a.4.1.3 (A:) 2610100b2 98.7 2.1E-08 1.5E-12 66.5 8.0 58 8-67 33-91 (95)
14 d1wgxa_ a.4.1.3 (A:) Hypotheti 98.6 5.6E-08 4.1E-12 61.5 7.5 50 6-56 6-55 (73)
15 d1w0ta_ a.4.1.4 (A:) DNA-bindi 98.6 8.2E-08 6E-12 56.4 6.7 46 9-58 3-50 (52)
16 d1w0ua_ a.4.1.4 (A:) Telomeric 98.5 1.6E-07 1.2E-11 55.7 6.9 47 9-59 3-51 (55)
17 d2ckxa1 a.4.1.3 (A:578-660) Te 98.2 2.1E-06 1.6E-10 54.4 6.7 45 10-58 2-50 (83)
18 d1ofcx1 a.4.1.3 (X:799-850) SA 97.8 2.4E-05 1.7E-09 46.3 6.0 51 10-64 1-51 (52)
19 d1irza_ a.4.1.11 (A:) Arr10-B 96.7 0.0019 1.4E-07 39.1 5.9 49 7-59 6-58 (64)
20 d1irza_ a.4.1.11 (A:) Arr10-B 95.9 0.002 1.4E-07 39.0 2.2 20 83-102 3-22 (64)
21 d1xc5a1 a.4.1.3 (A:413-480) Nu 94.3 0.0072 5.3E-07 35.8 1.4 20 83-102 13-32 (68)
22 d2cqra1 a.4.1.3 (A:7-66) DnaJ 92.9 0.037 2.7E-06 31.8 2.9 20 83-102 8-27 (60)
23 d2iw5b1 a.4.1.3 (B:376-440) RE 86.0 0.19 1.4E-05 28.9 2.0 16 87-102 5-20 (65)
24 d1x41a1 a.4.1.1 (A:8-54) Trans 85.7 0.17 1.2E-05 27.8 1.6 14 89-102 3-16 (47)
25 d1gv2a2 a.4.1.3 (A:144-190) c- 85.2 0.19 1.4E-05 27.7 1.7 15 88-102 2-16 (47)
26 d1ofcx2 a.4.1.13 (X:851-978) S 85.0 1.4 0.0001 29.1 6.4 53 9-62 50-114 (128)
27 d1w0ua_ a.4.1.4 (A:) Telomeric 81.5 0.35 2.6E-05 27.1 1.8 15 88-102 3-17 (55)
28 d1fs1b1 a.157.1.1 (B:86-140) C 79.8 0.52 3.8E-05 26.8 2.2 39 15-54 12-54 (55)
29 d1w0ta_ a.4.1.4 (A:) DNA-bindi 79.2 0.47 3.4E-05 26.3 1.8 15 88-102 3-17 (52)
30 d1lvaa3 a.4.5.35 (A:511-574) C 70.3 3.6 0.00026 23.3 4.3 47 12-60 2-50 (64)
31 d1nexa1 a.157.1.1 (A:116-185) 70.1 1.6 0.00012 25.7 2.7 41 14-55 12-56 (70)
32 d1fexa_ a.4.1.3 (A:) Rap1 {Hum 68.6 6.3 0.00046 22.4 5.1 47 9-56 3-55 (59)
33 d1au7a1 a.4.1.1 (A:103-160) Pi 68.5 7.2 0.00052 21.5 5.6 46 9-56 4-49 (58)
34 d2ecca1 a.4.1.1 (A:1-76) Homeo 66.0 9.5 0.00069 21.9 6.6 55 6-62 5-59 (76)
35 d1e3oc1 a.4.1.1 (C:104-160) Oc 65.4 8.4 0.00061 21.2 5.6 46 9-56 3-48 (57)
36 d1ug2a_ a.4.1.3 (A:) 2610100b2 63.2 4.6 0.00033 25.3 4.0 19 83-101 29-47 (95)
37 d1fjla_ a.4.1.1 (A:) Paired pr 61.1 11 0.00082 21.1 5.6 46 8-55 6-51 (65)
38 d2craa1 a.4.1.1 (A:7-64) Homeo 58.9 12 0.00086 20.7 5.8 45 9-55 6-50 (58)
39 d1ig7a_ a.4.1.1 (A:) Msx-1 hom 58.5 12 0.00085 20.5 5.9 45 9-55 5-49 (58)
40 d1bw5a_ a.4.1.1 (A:) Insulin g 58.3 13 0.00094 20.9 5.7 46 8-55 7-52 (66)
41 d1s7ea1 a.4.1.1 (A:103-152) He 54.6 10 0.00075 20.0 4.1 45 9-55 3-47 (50)
42 d2cuea1 a.4.1.1 (A:7-74) Paire 51.6 17 0.0013 20.4 5.7 45 9-55 6-50 (68)
43 d1pufa_ a.4.1.1 (A:) Homeobox 49.7 21 0.0015 20.7 5.6 45 9-55 18-62 (77)
44 d1vnda_ a.4.1.1 (A:) VND/NK-2 49.3 16 0.0012 21.2 4.7 46 9-56 14-59 (77)
45 d1yz8p1 a.4.1.1 (P:1-60) Pitui 48.8 18 0.0013 19.7 5.5 45 9-55 6-50 (60)
46 d1jgga_ a.4.1.1 (A:) Even-skip 46.9 19 0.0014 19.5 5.7 45 9-55 4-48 (57)
47 d1kkxa_ a.4.3.1 (A:) Transcrip 45.0 15 0.0011 22.2 4.2 31 31-62 55-85 (102)
48 d1zq3p1 a.4.1.1 (P:2-68) Homeo 44.6 23 0.0017 19.8 5.6 46 9-56 6-51 (67)
49 d1hbka_ a.11.1.1 (A:) Acyl-CoA 40.5 12 0.00091 22.4 3.2 22 40-62 63-84 (89)
50 d1le8a_ a.4.1.1 (A:) Mating ty 40.0 24 0.0018 18.7 5.4 44 10-55 3-46 (53)
51 d2cg4a1 a.4.5.32 (A:4-66) Regu 39.9 26 0.0019 19.0 5.8 39 17-60 8-46 (63)
52 d1p7ia_ a.4.1.1 (A:) Engrailed 38.0 26 0.0019 18.6 5.6 45 9-55 4-48 (53)
53 d1lfba_ a.4.1.1 (A:) Hepatocyt 36.7 36 0.0026 19.7 5.0 32 10-41 3-34 (78)
54 d1hb6a_ a.11.1.1 (A:) Acyl-CoA 36.3 16 0.0012 21.7 3.2 28 33-62 54-81 (86)
55 d2ecba1 a.4.1.1 (A:8-83) Zinc 35.6 35 0.0026 19.3 6.8 51 5-57 5-55 (76)
56 d1vp7a_ a.7.13.1 (A:) Exonucle 34.1 9 0.00066 22.2 1.6 12 45-56 27-38 (68)
57 d2cyya1 a.4.5.32 (A:5-64) Puta 33.1 33 0.0024 18.3 5.8 39 17-60 6-44 (60)
58 d1b72a_ a.4.1.1 (A:) Homeobox 32.9 44 0.0032 19.6 5.6 44 10-55 33-76 (88)
59 d2e1oa1 a.4.1.1 (A:8-64) Homeo 31.8 36 0.0026 18.3 5.8 45 9-55 5-49 (57)
60 d2cfxa1 a.4.5.32 (A:1-63) Tran 31.3 38 0.0027 18.4 5.8 39 16-59 7-45 (63)
61 d2cufa1 a.4.1.1 (A:8-89) Homeo 30.6 46 0.0033 19.1 5.1 33 9-41 5-37 (82)
62 d1i1ga1 a.4.5.32 (A:2-61) LprA 28.7 41 0.003 18.0 5.8 38 18-60 7-44 (60)
63 d1jhfa1 a.4.5.2 (A:2-72) LexA 28.4 46 0.0034 18.5 5.1 47 12-59 4-51 (71)
64 d2irfg_ a.4.5.23 (G:) Interfer 28.4 3.2 0.00023 26.4 -1.3 12 61-72 9-20 (109)
65 d1x2ma1 a.4.1.1 (A:8-59) Lag1 28.2 39 0.0029 17.9 3.7 42 12-55 1-43 (52)
66 d1uhsa_ a.4.1.1 (A:) Homeodoma 27.6 51 0.0037 18.7 5.1 48 8-57 5-53 (72)
67 d2onda1 a.118.8.7 (A:242-549) 25.7 44 0.0032 22.0 4.4 45 14-58 82-126 (308)
68 d1ocpa_ a.4.1.1 (A:) Oct-3 POU 23.3 59 0.0043 18.0 5.3 46 8-55 12-57 (67)
69 d1c20a_ a.4.3.1 (A:) DNA-bindi 21.6 55 0.004 20.2 4.0 36 32-67 74-113 (128)
70 d2pi0a1 a.4.5.23 (A:5-110) Int 21.6 4.1 0.0003 25.8 -1.7 12 61-72 9-20 (106)
71 d1pula1 a.39.1.11 (A:18-120) H 21.4 55 0.004 20.0 3.9 45 10-69 1-45 (103)
72 d1x58a1 a.4.1.1 (A:8-56) Hypot 21.2 63 0.0046 17.4 5.9 45 9-58 2-49 (49)
No 1
>d2cjja1 a.4.1.3 (A:8-70) Radialis {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]}
Probab=99.90 E-value=6.2e-24 Score=132.17 Aligned_cols=62 Identities=53% Similarity=0.877 Sum_probs=60.3
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHHHHHhhhhhcCCCCCC
Q 048152 9 CGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVILLEDLQFIESGKLDH 71 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~L~~dV~~IEsG~v~~ 71 (104)
++||.+|+++|..|++.|+.+.+++|.+||..||| ||..||+.||+.|++||+.||+|+||+
T Consensus 2 ~~WT~eEd~~L~~~v~~~~~~~~~~W~~Ia~~l~g-Rt~~qc~~r~~~L~~dik~iesg~vpf 63 (63)
T d2cjja1 2 RPWSAKENKAFERALAVYDKDTPDRWANVARAVEG-RTPEEVKKHYEILVEDIKYIESGKVPF 63 (63)
T ss_dssp CSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHSTT-CCHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cCCCHHHHHHHHHHHHHHCCCCchHHHHHHHHcCC-CCHHHHHHHHHHHHHHhhccccCCCCC
Confidence 57999999999999999999999999999999999 999999999999999999999999985
No 2
>d2cqqa1 a.4.1.3 (A:8-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=7.9e-23 Score=127.31 Aligned_cols=59 Identities=22% Similarity=0.362 Sum_probs=54.3
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHHHHHhhhhhcCCCC
Q 048152 8 FCGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVILLEDLQFIESGKL 69 (104)
Q Consensus 8 ~~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~L~~dV~~IEsG~v 69 (104)
+..||.+|+++||+||++||+++|+||++||++| | ||++||+.||+.|.+++ .+.+|.|
T Consensus 1 a~eWT~ee~~~le~Al~~~P~gt~~RW~~IA~~v-g-kt~~ev~~~~k~l~e~~-~~~~g~v 59 (59)
T d2cqqa1 1 APEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHEL-G-RSVTDVTTKAKQLKDSV-TCSPGMV 59 (59)
T ss_dssp CCCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHH-T-SCHHHHHHHHHHHHHSC-CCCSCCC
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCcHHHHHHHHHH-C-CCHHHHHHHHHHHHHhc-ccCCCCC
Confidence 3679999999999999999999999999999999 7 99999999999999998 4666654
No 3
>d2cqra1 a.4.1.3 (A:7-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=1e-16 Score=98.11 Aligned_cols=51 Identities=31% Similarity=0.472 Sum_probs=47.8
Q ss_pred CCCCCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHHH
Q 048152 6 KVFCGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVIL 57 (104)
Q Consensus 6 ~~~~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~L 57 (104)
.....||.+||++|..|+..|+.+++.+|.+||..||| ||..||+.||+.|
T Consensus 10 ~~~~~WT~eEd~~L~~~v~~~~~~~~~~W~~IA~~l~~-Rt~~qc~~R~~~L 60 (60)
T d2cqra1 10 SAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCVPS-KSKEDCIARYKLL 60 (60)
T ss_dssp CSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGCSS-SCHHHHHHHHHHH
T ss_pred cCCCCcCHHHHHHHHHHHHHcCCccchHHHHHHHHcCC-CCHHHHHHHHHHC
Confidence 34567999999999999999999999999999999999 9999999999987
No 4
>d1x41a1 a.4.1.1 (A:8-54) Transcriptional adaptor 2-like, TADA2L, isoform b {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.15 E-value=4.5e-11 Score=69.75 Aligned_cols=44 Identities=25% Similarity=0.382 Sum_probs=39.8
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHH
Q 048152 9 CGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVI 56 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~ 56 (104)
+.||.+|+.+|..|+.+|+.+ .|.+||..||| ||..+|+.||..
T Consensus 2 ~~Wt~eEd~~L~~~v~~~G~~---nW~~Ia~~~~~-Rt~~Qcr~r~~~ 45 (47)
T d1x41a1 2 PSWTAQEEMALLEAVMDCGFG---NWQDVANQMCT-KTKEECEKHYMK 45 (47)
T ss_dssp SSSCHHHHHHHHHHHHHTCTT---CHHHHHHHHTT-SCHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCCc---cHHHHHHHcCC-CCHHHHHHHHHH
Confidence 459999999999999999643 59999999999 999999999974
No 5
>d2cu7a1 a.4.1.3 (A:8-72) MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.13 E-value=6.4e-11 Score=72.22 Aligned_cols=48 Identities=25% Similarity=0.531 Sum_probs=43.4
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHHHHHh
Q 048152 8 FCGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVILLED 60 (104)
Q Consensus 8 ~~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~L~~d 60 (104)
+..||.||+.+|..++..|+. .|..||..||| ||..+|+.||..++..
T Consensus 2 ~~~WT~eEd~~l~~~~~~~G~----~W~~Ia~~~~~-Rt~~q~k~ry~~~~~~ 49 (65)
T d2cu7a1 2 SVKWTIEEKELFEQGLAKFGR----RWTKISKLIGS-RTVLQVKSYARQYFKN 49 (65)
T ss_dssp CCCCCHHHHHHHHHHHHHTCS----CHHHHHHHHSS-SCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhcc----hHHHHHHHcCC-CCHHHHHHHHHHHHHH
Confidence 567999999999999999974 69999999999 9999999999877654
No 6
>d2iw5b1 a.4.1.3 (B:376-440) REST corepressor 1, CoREST {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=5.7e-11 Score=72.75 Aligned_cols=47 Identities=21% Similarity=0.350 Sum_probs=42.5
Q ss_pred CCCCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHHHH
Q 048152 7 VFCGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVILL 58 (104)
Q Consensus 7 ~~~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~L~ 58 (104)
..+.||.+|+.+|..+|..|+. .|..||+.||| ||..+|+.+|..+.
T Consensus 4 ~~~~WT~eE~~~f~~~~~~~G~----~w~~Ia~~~~~-kt~~q~~~~y~~~~ 50 (65)
T d2iw5b1 4 CNARWTTEEQLLAVQAIRKYGR----DFQAISDVIGN-KSVVQVKNFFVNYR 50 (65)
T ss_dssp CCSSCCHHHHHHHHHHHHHHSS----CHHHHHHHHSS-CCHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHhCc----hHHHHHHHcCC-CCHHHHHHHHHHHH
Confidence 3567999999999999999985 49999999999 99999999998753
No 7
>d1xc5a1 a.4.1.3 (A:413-480) Nuclear receptor corepressor 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.00 E-value=1e-10 Score=72.27 Aligned_cols=47 Identities=17% Similarity=0.319 Sum_probs=41.9
Q ss_pred CCCCCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHHH
Q 048152 6 KVFCGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVIL 57 (104)
Q Consensus 6 ~~~~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~L 57 (104)
.....||.+|+.+|..|+.+|+. .|.+||..||| ||..+|+.||-..
T Consensus 15 ~~~~~WT~eE~~~f~~~~~~~G~----~w~~Ia~~~~~-rt~~q~~~~yy~~ 61 (68)
T d1xc5a1 15 QVMNMWSEQEKETFREKFMQHPK----NFGLIASFLER-KTVAECVLYYYLT 61 (68)
T ss_dssp TTTTCCCTTTHHHHHHHHHHTTS----CSSSHHHHTTT-SCHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHHCC----cHHHHHHHcCC-CCHHHHHHHHHHH
Confidence 34567999999999999999975 49999999999 9999999999754
No 8
>d1gv2a2 a.4.1.3 (A:144-190) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.99 E-value=3.3e-10 Score=66.10 Aligned_cols=45 Identities=20% Similarity=0.542 Sum_probs=41.6
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHHHH
Q 048152 9 CGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVILL 58 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~L~ 58 (104)
++||.|||++|-.+...|+. +|..||..||| ||..+|+.||..++
T Consensus 2 ~~WT~eED~~L~~~v~~~G~----~W~~Ia~~~~g-Rt~~~~knr~~~~l 46 (47)
T d1gv2a2 2 TSWTEEEDRIIYQAHKRLGN----RWAEIAKLLPG-RTDNAIKNHWNSTM 46 (47)
T ss_dssp CCCCHHHHHHHHHHHHHHSS----CHHHHHTTCTT-CCHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHhh----HHHHHHhHcCC-CCHHHHHHHHHHHc
Confidence 57999999999999999974 79999999999 99999999998763
No 9
>d1guua_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.97 E-value=8.2e-10 Score=64.73 Aligned_cols=46 Identities=17% Similarity=0.416 Sum_probs=41.3
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHHHH
Q 048152 9 CGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVILL 58 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~L~ 58 (104)
..||.+||.+|-.++.+|+.+ .|.+||..||| ||..+|+.||...+
T Consensus 2 ~~WT~eED~~L~~~v~~~g~~---~W~~Ia~~~~~-Rt~~qcr~Rw~~~L 47 (50)
T d1guua_ 2 TRWTREEDEKLKKLVEQNGTD---DWKVIANYLPN-RTDVQCQHRWQKVL 47 (50)
T ss_dssp CCCCHHHHHHHHHHHHHHCSS---CHHHHHHTSTT-CCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCC---CHHHHHHHHCC-CCHHHHHHHHHhhC
Confidence 469999999999999999643 49999999999 99999999998754
No 10
>d1gvda_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.90 E-value=1.4e-09 Score=64.45 Aligned_cols=44 Identities=18% Similarity=0.395 Sum_probs=40.2
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHH
Q 048152 9 CGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVI 56 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~ 56 (104)
.+||.+||++|-.++.+|+. ..|..||..||| ||..+|+.||..
T Consensus 4 g~WT~eED~~L~~~v~~~g~---~~W~~Ia~~l~~-Rt~~qc~~Rw~~ 47 (52)
T d1gvda_ 4 GPWTKEEDQRLIKLVQKYGP---KRWSVIAKHLKG-RIGKQCRERWHN 47 (52)
T ss_dssp CSCCHHHHHHHHHHHHHHCT---TCHHHHHTTSTT-CCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCC---CCHHHHHHHHCC-CCHHHHHHHHHh
Confidence 57999999999999999964 359999999999 999999999985
No 11
>d1igna1 a.4.1.6 (A:360-445) DNA-binding domain of rap1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.89 E-value=2.3e-10 Score=74.35 Aligned_cols=48 Identities=6% Similarity=0.189 Sum_probs=42.6
Q ss_pred CCCCHHHHHHHHHHHhhcCC--CCCchHHHHHHHcCCCCCHHHHHHHHHHH
Q 048152 9 CGWSWEENKLFELALAVVDE--QDPHRWEVVAAMVGGTKSAEDVQKHYVIL 57 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~--~~pdRWekIA~~vpg~KS~~eV~~ryk~L 57 (104)
..||.|||+++-.++..|+. +....|..||..||| ||..+|+.||...
T Consensus 2 ~~WT~eED~~L~~~v~~~g~~~~~~~~W~~IA~~lpg-Rt~~qcr~Rw~~~ 51 (86)
T d1igna1 2 ASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHYVPN-HTGNSIRHRFRVY 51 (86)
T ss_dssp CCCCHHHHHHHHHHHHTSGGGTTCSHHHHHHTTTSTT-SCHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHhCcCcCCccCHHHHHHHcCC-CCHHHHHHHHHHH
Confidence 47999999999999999974 345679999999999 9999999999864
No 12
>d2crga1 a.4.1.3 (A:8-64) Metastasis associated protein MTA3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.79 E-value=4.7e-09 Score=63.16 Aligned_cols=42 Identities=26% Similarity=0.313 Sum_probs=38.3
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCchHHHHHH-HcCCCCCHHHHHHHHH
Q 048152 9 CGWSWEENKLFELALAVVDEQDPHRWEVVAA-MVGGTKSAEDVQKHYV 55 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~-~vpg~KS~~eV~~ryk 55 (104)
..||.+|.++|+.||..|++ .|.+||+ .||+ ||+.||+.+|=
T Consensus 2 d~WT~eE~~~F~~~~~~yGK----df~~I~~~~v~~-Ks~~~~v~fYY 44 (57)
T d2crga1 2 EEWSASEACLFEEALEKYGK----DFNDIRQDFLPW-KSLTSIIEYYY 44 (57)
T ss_dssp CCCCHHHHHHHHHHHHHTCS----CHHHHHHTTCSS-SCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHcc----cHHHHHHHHcCC-CCHHHHHHHHH
Confidence 46999999999999999987 5999997 5798 99999999994
No 13
>d1ug2a_ a.4.1.3 (A:) 2610100b20rik gene product {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.74 E-value=2.1e-08 Score=66.55 Aligned_cols=58 Identities=21% Similarity=0.409 Sum_probs=49.3
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHHHHHhh-hhhcCC
Q 048152 8 FCGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVILLEDL-QFIESG 67 (104)
Q Consensus 8 ~~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~L~~dV-~~IEsG 67 (104)
...||+|||+++-.....+. ..+.-|..||+.++| ||..+|+.||+.|..-. ..||++
T Consensus 33 ~~~WTrEEDriIL~~~q~~G-~~~~tw~~Ia~~L~~-Rs~~qvr~Rf~~Lm~lf~~~~e~~ 91 (95)
T d1ug2a_ 33 VVLWTREADRVILTMCQEQG-AQPHTFSVISQQLGN-KTPVEVSHRFRELMQLFHTACESG 91 (95)
T ss_dssp CSSSCHHHHHHHHHHHHHTT-SCTTTHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHCSSSC
T ss_pred cCCcCHHHHHHHHHHHHHcC-CcHHHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHhhccC
Confidence 45699999999999999887 356679999999999 99999999999998776 345653
No 14
>d1wgxa_ a.4.1.3 (A:) Hypothetical protein C14orf106 (KIAA1903) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.65 E-value=5.6e-08 Score=61.46 Aligned_cols=50 Identities=30% Similarity=0.461 Sum_probs=46.5
Q ss_pred CCCCCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHH
Q 048152 6 KVFCGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVI 56 (104)
Q Consensus 6 ~~~~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~ 56 (104)
..+..|+.+|...|..||+.+|+..|..|..||.+|+. ||++||.+.|..
T Consensus 6 t~d~~W~e~ELqkLh~A~~SlPkh~~gfW~~VA~~VGt-RSaeECQ~ky~~ 55 (73)
T d1wgxa_ 6 SGDKEWNEKELQKLHCAFASLPKHKPGFWSEVAAAVGS-RSPEECQRKYME 55 (73)
T ss_dssp CSSSCCCHHHHHHHHHHHHHSCSSSSSHHHHHHHHTTT-SCHHHHHHHHHH
T ss_pred CcccccCHHHHHHHHHHHHhcCCCCCccHHHHHHHHcc-CCHHHHHHHHHh
Confidence 45668999999999999999999999999999999987 999999999975
No 15
>d1w0ta_ a.4.1.4 (A:) DNA-binding domain of human telomeric protein, hTRF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.59 E-value=8.2e-08 Score=56.43 Aligned_cols=46 Identities=15% Similarity=0.389 Sum_probs=40.8
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcC--CCCCHHHHHHHHHHHH
Q 048152 9 CGWSWEENKLFELALAVVDEQDPHRWEVVAAMVG--GTKSAEDVQKHYVILL 58 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vp--g~KS~~eV~~ryk~L~ 58 (104)
..||.||+.+|-.++.+|+.+ .|..||..+| | ||..+|+.||..|.
T Consensus 3 ~~WT~eED~~L~~~v~~~G~~---~W~~I~~~~~~~~-Rt~~q~r~Rw~nl~ 50 (52)
T d1w0ta_ 3 QAWLWEEDKNLRSGVRKYGEG---NWSKILLHYKFNN-RTSVMLKDRWRTMK 50 (52)
T ss_dssp CCCCHHHHHHHHHHHHHHCTT---CHHHHHHHSCCSS-CCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCC---CHHHHHhhcCCCC-CCHHHHHHHHHHHH
Confidence 479999999999999999643 6999999866 7 99999999998874
No 16
>d1w0ua_ a.4.1.4 (A:) Telomeric repeat binding factor 2, TRF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.53 E-value=1.6e-07 Score=55.66 Aligned_cols=47 Identities=13% Similarity=0.309 Sum_probs=40.8
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCchHHHHHHH--cCCCCCHHHHHHHHHHHHH
Q 048152 9 CGWSWEENKLFELALAVVDEQDPHRWEVVAAM--VGGTKSAEDVQKHYVILLE 59 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~--vpg~KS~~eV~~ryk~L~~ 59 (104)
..||.+|+++|..++.+|.. ..|..||.. ++| ||..+|+.||..|+.
T Consensus 3 ~~WT~eEd~~L~~~V~~~G~---~~W~~I~~~~~~~~-Rt~~q~k~Rwrn~~k 51 (55)
T d1w0ua_ 3 QKWTVEESEWVKAGVQKYGE---GNWAAISKNYPFVN-RTAVMIKDRWRTMKR 51 (55)
T ss_dssp CCCCHHHHHHHHHHHHHHCT---TCHHHHHHHSCCSS-CCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCC---ChHHHHHhhcCCCC-cCHHHHHHHHHHHhc
Confidence 47999999999999999953 359999998 458 999999999998753
No 17
>d2ckxa1 a.4.1.3 (A:578-660) Telomere binding protein TBP1 {Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=98.20 E-value=2.1e-06 Score=54.35 Aligned_cols=45 Identities=18% Similarity=0.268 Sum_probs=40.5
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCchHHHHHHH----cCCCCCHHHHHHHHHHHH
Q 048152 10 GWSWEENKLFELALAVVDEQDPHRWEVVAAM----VGGTKSAEDVQKHYVILL 58 (104)
Q Consensus 10 ~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~----vpg~KS~~eV~~ryk~L~ 58 (104)
+||.||+.+|-.++..|..+ .|..||.. ++| ||..+|+.||..|+
T Consensus 2 ~WT~eEd~~L~~~V~~~G~~---~W~~I~~~~~~~~~~-Rt~~qck~RWrn~l 50 (83)
T d2ckxa1 2 PFSVAEVEALVEAVEHLGTG---RWRDVKMRAFDNADH-RTYVDLKDKWKTLV 50 (83)
T ss_dssp CCCHHHHHHHHHHHHHHCSS---CHHHHHHHHCTTCTT-SCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCcc---cHHHHHHHHHhhccC-CCHHHHHHHHHHHh
Confidence 69999999999999999643 69999986 688 99999999999886
No 18
>d1ofcx1 a.4.1.3 (X:799-850) SANT domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=97.84 E-value=2.4e-05 Score=46.33 Aligned_cols=51 Identities=22% Similarity=0.279 Sum_probs=43.2
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHHHHHhhhhh
Q 048152 10 GWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVILLEDLQFI 64 (104)
Q Consensus 10 ~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~L~~dV~~I 64 (104)
+||+-|-..|-+|+.+|..+. -+.||..|.| ||.+||++.++..-+-...|
T Consensus 1 ~WnrrdF~~Fi~a~ekyGR~d---~~~Ia~e~~~-Kt~eEV~~Y~~vFw~ry~ei 51 (52)
T d1ofcx1 1 AWTKRDFNQFIKANEKYGRDD---IDNIAKDVEG-KTPEEVIEYNAVFWERCTEL 51 (52)
T ss_dssp TCCHHHHHHHHHHHHHHCTTC---HHHHTTSSTT-CCHHHHHHHHHHHHHHGGGC
T ss_pred CCCHHHHHHHHHHHHHHHHhh---HHHHHHHhcC-CCHHHHHHHHHHHHHHHHhh
Confidence 599999999999999998743 6999999999 99999998887765554443
No 19
>d1irza_ a.4.1.11 (A:) Arr10-B {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=96.75 E-value=0.0019 Score=39.06 Aligned_cols=49 Identities=18% Similarity=0.186 Sum_probs=38.3
Q ss_pred CCCCCCHHHHHHHHHHHhhcCCCCCchH--HHHHHH--cCCCCCHHHHHHHHHHHHH
Q 048152 7 VFCGWSWEENKLFELALAVVDEQDPHRW--EVVAAM--VGGTKSAEDVQKHYVILLE 59 (104)
Q Consensus 7 ~~~~WT~eE~k~fE~ALa~~p~~~pdRW--ekIA~~--vpg~KS~~eV~~ryk~L~~ 59 (104)
.--.||.|+.+.|..|+..+.. ++| .+|... ||| .|..+|..|.+..--
T Consensus 6 ~R~~WT~elH~~Fv~Av~~lG~---~~atpk~I~~~m~v~~-lT~~qV~SHlQKYrl 58 (64)
T d1irza_ 6 PRVLWTHELHNKFLAAVDHLGV---ERAVPKKILDLMNVDK-LTRENVASHLQKFRV 58 (64)
T ss_dssp SSCSSCHHHHHHHHHHHHHHCT---TTCCHHHHHHHHCCTT-CCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCc---cccchHHHHHHcCCCC-CCHHHHHHHHHHHHH
Confidence 3446999999999999999954 334 466555 888 999999999876543
No 20
>d1irza_ a.4.1.11 (A:) Arr10-B {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=95.86 E-value=0.002 Score=39.02 Aligned_cols=20 Identities=30% Similarity=0.351 Sum_probs=16.8
Q ss_pred CCcccccCCHHHHHHHhhhc
Q 048152 83 DCTQSVCWTDEDNNLLLQLD 102 (104)
Q Consensus 83 erkkg~pWTeeEhrlFL~~~ 102 (104)
.++..+.||+|+|+.||.+.
T Consensus 3 ~kk~R~~WT~elH~~Fv~Av 22 (64)
T d1irza_ 3 QKKPRVLWTHELHNKFLAAV 22 (64)
T ss_dssp CCCSSCSSCHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHH
Confidence 45667889999999999875
No 21
>d1xc5a1 a.4.1.3 (A:413-480) Nuclear receptor corepressor 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.29 E-value=0.0072 Score=35.82 Aligned_cols=20 Identities=10% Similarity=0.245 Sum_probs=16.9
Q ss_pred CCcccccCCHHHHHHHhhhc
Q 048152 83 DCTQSVCWTDEDNNLLLQLD 102 (104)
Q Consensus 83 erkkg~pWTeeEhrlFL~~~ 102 (104)
.+++..|||+||+.+|+.+.
T Consensus 13 ~~~~~~~WT~eE~~~f~~~~ 32 (68)
T d1xc5a1 13 DRQVMNMWSEQEKETFREKF 32 (68)
T ss_dssp STTTTTCCCTTTHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHHHHH
Confidence 45667899999999999874
No 22
>d2cqra1 a.4.1.3 (A:7-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.93 E-value=0.037 Score=31.84 Aligned_cols=20 Identities=20% Similarity=0.224 Sum_probs=16.0
Q ss_pred CCcccccCCHHHHHHHhhhc
Q 048152 83 DCTQSVCWTDEDNNLLLQLD 102 (104)
Q Consensus 83 erkkg~pWTeeEhrlFL~~~ 102 (104)
.+....|||.||..+|+.++
T Consensus 8 ~~~~~~~WT~eEd~~L~~~v 27 (60)
T d2cqra1 8 ARSAEEPWTQNQQKLLELAL 27 (60)
T ss_dssp TTCSSCCCCHHHHHHHHHHH
T ss_pred CCcCCCCcCHHHHHHHHHHH
Confidence 34445689999999999875
No 23
>d2iw5b1 a.4.1.3 (B:376-440) REST corepressor 1, CoREST {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.00 E-value=0.19 Score=28.91 Aligned_cols=16 Identities=31% Similarity=0.455 Sum_probs=13.6
Q ss_pred cccCCHHHHHHHhhhc
Q 048152 87 SVCWTDEDNNLLLQLD 102 (104)
Q Consensus 87 g~pWTeeEhrlFL~~~ 102 (104)
+-+||++|..+|+.+.
T Consensus 5 ~~~WT~eE~~~f~~~~ 20 (65)
T d2iw5b1 5 NARWTTEEQLLAVQAI 20 (65)
T ss_dssp CSSCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH
Confidence 4579999999999864
No 24
>d1x41a1 a.4.1.1 (A:8-54) Transcriptional adaptor 2-like, TADA2L, isoform b {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.66 E-value=0.17 Score=27.76 Aligned_cols=14 Identities=29% Similarity=0.572 Sum_probs=12.5
Q ss_pred cCCHHHHHHHhhhc
Q 048152 89 CWTDEDNNLLLQLD 102 (104)
Q Consensus 89 pWTeeEhrlFL~~~ 102 (104)
.||+||+.+||.++
T Consensus 3 ~Wt~eEd~~L~~~v 16 (47)
T d1x41a1 3 SWTAQEEMALLEAV 16 (47)
T ss_dssp SSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 49999999999885
No 25
>d1gv2a2 a.4.1.3 (A:144-190) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=85.23 E-value=0.19 Score=27.66 Aligned_cols=15 Identities=27% Similarity=0.795 Sum_probs=13.2
Q ss_pred ccCCHHHHHHHhhhc
Q 048152 88 VCWTDEDNNLLLQLD 102 (104)
Q Consensus 88 ~pWTeeEhrlFL~~~ 102 (104)
.|||+||-.++|.++
T Consensus 2 ~~WT~eED~~L~~~v 16 (47)
T d1gv2a2 2 TSWTEEEDRIIYQAH 16 (47)
T ss_dssp CCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH
Confidence 489999999999875
No 26
>d1ofcx2 a.4.1.13 (X:851-978) SLIDE domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=85.05 E-value=1.4 Score=29.13 Aligned_cols=53 Identities=13% Similarity=0.213 Sum_probs=45.6
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHc------------CCCCCHHHHHHHHHHHHHhhh
Q 048152 9 CGWSWEENKLFELALAVVDEQDPHRWEVVAAMV------------GGTKSAEDVQKHYVILLEDLQ 62 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~v------------pg~KS~~eV~~ryk~L~~dV~ 62 (104)
...|.+||+.+-.+|-.|.-+.++=|+.|-.+| -. +|+.|+.+|...|+.-|.
T Consensus 50 k~yteeEDRfLl~~~~~~G~~~~~~~e~ir~~Ir~~p~FrFDwf~kS-Rt~~el~rR~~tLi~~i~ 114 (128)
T d1ofcx2 50 KNYTEIEDRFLVCMLHKLGFDKENVYEELRAAIRASPQFRFDWFIKS-RTALELQRRCNTLITLIE 114 (128)
T ss_dssp SSCCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHCGGGTTCHHHHT-CCHHHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHhcCCCccHHHHHHHHHHhCcchhhhhHhcc-CCHHHHHHHHHHHHHHHH
Confidence 459999999999999999999999999997655 24 889999999999976654
No 27
>d1w0ua_ a.4.1.4 (A:) Telomeric repeat binding factor 2, TRF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.51 E-value=0.35 Score=27.12 Aligned_cols=15 Identities=20% Similarity=0.204 Sum_probs=13.1
Q ss_pred ccCCHHHHHHHhhhc
Q 048152 88 VCWTDEDNNLLLQLD 102 (104)
Q Consensus 88 ~pWTeeEhrlFL~~~ 102 (104)
.|||+||-.+++.++
T Consensus 3 ~~WT~eEd~~L~~~V 17 (55)
T d1w0ua_ 3 QKWTVEESEWVKAGV 17 (55)
T ss_dssp CCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH
Confidence 489999999999875
No 28
>d1fs1b1 a.157.1.1 (B:86-140) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.76 E-value=0.52 Score=26.84 Aligned_cols=39 Identities=33% Similarity=0.480 Sum_probs=26.8
Q ss_pred HHHHHHHHHhhcCCCCCc----hHHHHHHHcCCCCCHHHHHHHH
Q 048152 15 ENKLFELALAVVDEQDPH----RWEVVAAMVGGTKSAEDVQKHY 54 (104)
Q Consensus 15 E~k~fE~ALa~~p~~~pd----RWekIA~~vpg~KS~~eV~~ry 54 (104)
...+|+-..|..--+-+. -=.+||..+-| ||++|+++.|
T Consensus 12 ~~~Lf~Li~AAnyL~I~~Lldl~c~~vA~~ikg-Kt~eeiR~~f 54 (55)
T d1fs1b1 12 QGTLFELILAANYLDIKGLLDVTCKTVANMIKG-KTPEEIRKTF 54 (55)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT-CCHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHcC-CCHHHHHHHh
Confidence 456777777753222221 12789999999 9999999875
No 29
>d1w0ta_ a.4.1.4 (A:) DNA-binding domain of human telomeric protein, hTRF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.23 E-value=0.47 Score=26.32 Aligned_cols=15 Identities=20% Similarity=0.173 Sum_probs=13.1
Q ss_pred ccCCHHHHHHHhhhc
Q 048152 88 VCWTDEDNNLLLQLD 102 (104)
Q Consensus 88 ~pWTeeEhrlFL~~~ 102 (104)
.|||+||-..++.++
T Consensus 3 ~~WT~eED~~L~~~v 17 (52)
T d1w0ta_ 3 QAWLWEEDKNLRSGV 17 (52)
T ss_dssp CCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH
Confidence 489999999998875
No 30
>d1lvaa3 a.4.5.35 (A:511-574) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=70.28 E-value=3.6 Score=23.32 Aligned_cols=47 Identities=15% Similarity=0.150 Sum_probs=39.1
Q ss_pred CHHHHHHHHHHHhhcCC--CCCchHHHHHHHcCCCCCHHHHHHHHHHHHHh
Q 048152 12 SWEENKLFELALAVVDE--QDPHRWEVVAAMVGGTKSAEDVQKHYVILLED 60 (104)
Q Consensus 12 T~eE~k~fE~ALa~~p~--~~pdRWekIA~~vpg~KS~~eV~~ryk~L~~d 60 (104)
|.+|.++.++....|-. -.|-.+.-||..+ | -+..+++..++.|+..
T Consensus 2 s~~q~~l~~~I~~~~~~~g~~PP~vrdl~~~l-~-~~e~~~~~lL~~l~~~ 50 (64)
T d1lvaa3 2 SETQKKLLKDLEDKYRVSRWQPPSFKEVAGSF-N-LDPSELEELLHYLVRE 50 (64)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSCCBHHHHHHHT-T-CCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHh-C-CCHHHHHHHHHHHHHC
Confidence 67889999999888853 3788899999999 4 7899999999888653
No 31
>d1nexa1 a.157.1.1 (A:116-185) Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=70.13 E-value=1.6 Score=25.66 Aligned_cols=41 Identities=27% Similarity=0.441 Sum_probs=28.4
Q ss_pred HHHHHHHHHHhhcCCCCCch----HHHHHHHcCCCCCHHHHHHHHH
Q 048152 14 EENKLFELALAVVDEQDPHR----WEVVAAMVGGTKSAEDVQKHYV 55 (104)
Q Consensus 14 eE~k~fE~ALa~~p~~~pdR----WekIA~~vpg~KS~~eV~~ryk 55 (104)
+...+|+-.+|..--+-+.- =.+||..+-| ||++|+++.|.
T Consensus 12 d~~~L~~li~AAnyL~I~~Ll~l~c~~vA~~ikg-kt~eeiR~~f~ 56 (70)
T d1nexa1 12 DQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRG-RSPEEIRRTFN 56 (70)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT-CCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHcc-CCHHHHHHHhC
Confidence 35677887777643222221 2689999999 99999988763
No 32
>d1fexa_ a.4.1.3 (A:) Rap1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.63 E-value=6.3 Score=22.36 Aligned_cols=47 Identities=6% Similarity=0.131 Sum_probs=38.4
Q ss_pred CCCCHHHHHHHHHHHhhcCCC-----CCchHHHHHH-HcCCCCCHHHHHHHHHH
Q 048152 9 CGWSWEENKLFELALAVVDEQ-----DPHRWEVVAA-MVGGTKSAEDVQKHYVI 56 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~-----~pdRWekIA~-~vpg~KS~~eV~~ryk~ 56 (104)
..-|.+||.++-.-++.+... ...-|..++. .+|. .|-...+.||..
T Consensus 3 ~~fT~eeD~~l~~yv~~~~~~~~~~~Gn~iwk~l~~~~~~~-HtwQSwrdRY~K 55 (59)
T d1fexa_ 3 IAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKSSLTQ-HSWQSLKDRYLK 55 (59)
T ss_dssp CCCCHHHHHHHHHHHHHTCCSTTTTTSSHHHHHHHHSCSSS-CCSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhccCcCCccHHHHHHHHHHhcCCC-CCHHHHHHHHHH
Confidence 457999999999999987433 3457999995 6898 999999999964
No 33
>d1au7a1 a.4.1.1 (A:103-160) Pit-1 POU homeodomain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=68.50 E-value=7.2 Score=21.49 Aligned_cols=46 Identities=11% Similarity=0.030 Sum_probs=38.2
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHH
Q 048152 9 CGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVI 56 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~ 56 (104)
..+|.++..+||..++..|--+...=+.||..+ | -|..+|.-=|..
T Consensus 4 t~~s~~q~~~Le~~F~~~~~P~~~~~~~La~~l-~-l~~~~V~~WFqN 49 (58)
T d1au7a1 4 TTISIAAKDALERHFGEHSKPSSQEIMRMAEEL-N-LEKEVVRVWFCN 49 (58)
T ss_dssp CCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHH-T-CCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHccCCCHHHHHHHHHHh-C-CCHHHHHHHHHH
Confidence 468999999999999997765666669999999 5 899998876654
No 34
>d2ecca1 a.4.1.1 (A:1-76) Homeobox-leucine zipper protein Homez {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.97 E-value=9.5 Score=21.95 Aligned_cols=55 Identities=5% Similarity=-0.020 Sum_probs=43.9
Q ss_pred CCCCCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHHHHHhhh
Q 048152 6 KVFCGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVILLEDLQ 62 (104)
Q Consensus 6 ~~~~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~L~~dV~ 62 (104)
+.....|.++..+||..++..+--+.+.=+.||..+ | -+..+|..=|+.--.-++
T Consensus 5 s~~~r~T~eQ~~~Le~~F~~n~~Ps~~~~~~La~~~-g-L~~~qV~~WF~NrR~k~k 59 (76)
T d2ecca1 5 SSGKRKTKEQLAILKSFFLQCQWARREDYQKLEQIT-G-LPRPEIIQWFGDTRYALK 59 (76)
T ss_dssp CCCCCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHT-C-CCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHH-c-cCHHHHHHHHHHHHHHHH
Confidence 445568999999999999997766667779999999 5 999999977766554444
No 35
>d1e3oc1 a.4.1.1 (C:104-160) Oct-1 POU Homeodomain {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.45 E-value=8.4 Score=21.15 Aligned_cols=46 Identities=7% Similarity=0.029 Sum_probs=38.6
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHH
Q 048152 9 CGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVI 56 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~ 56 (104)
..+|.++...||.+++..|.-++..=+.||..+ | -+..+|.-=|+.
T Consensus 3 T~~~~~q~~~Le~~F~~~~~P~~~~~~~LA~~l-g-L~~~qV~~WFqN 48 (57)
T d1e3oc1 3 TSIETNIRVALEKSFMENQKPTSEDITLIAEQL-N-MEKEVIRVWFSN 48 (57)
T ss_dssp CCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHH-T-CCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH-C-CCHHHHHHHHHH
Confidence 458899999999999998776777789999999 5 899998876654
No 36
>d1ug2a_ a.4.1.3 (A:) 2610100b20rik gene product {Mouse (Mus musculus) [TaxId: 10090]}
Probab=63.25 E-value=4.6 Score=25.29 Aligned_cols=19 Identities=26% Similarity=0.595 Sum_probs=15.6
Q ss_pred CCcccccCCHHHHHHHhhh
Q 048152 83 DCTQSVCWTDEDNNLLLQL 101 (104)
Q Consensus 83 erkkg~pWTeeEhrlFL~~ 101 (104)
...+.+.||.||-|..|+.
T Consensus 29 ~G~~~~~WTrEEDriIL~~ 47 (95)
T d1ug2a_ 29 TGEKVVLWTREADRVILTM 47 (95)
T ss_dssp CCCCCSSSCHHHHHHHHHH
T ss_pred CCCccCCcCHHHHHHHHHH
Confidence 3446889999999999975
No 37
>d1fjla_ a.4.1.1 (A:) Paired protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=61.06 E-value=11 Score=21.10 Aligned_cols=46 Identities=15% Similarity=0.048 Sum_probs=37.2
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHH
Q 048152 8 FCGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYV 55 (104)
Q Consensus 8 ~~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk 55 (104)
-..+|.+|..+||..+...|--+...=+.||..+ | -|...|.--|+
T Consensus 6 Rt~ft~~Q~~~Le~~F~~n~yPs~~~r~~LA~~l-g-l~~~~V~~WFq 51 (65)
T d1fjla_ 6 RTTFSASQLDELERAFERTQYPDIYTREELAQRT-N-LTEARIQVWFQ 51 (65)
T ss_dssp CCCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHH-T-CCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCChHHHHHHHHHh-C-CCHHHhhHhhh
Confidence 3468999999999999987655666668999999 5 89999876554
No 38
>d2craa1 a.4.1.1 (A:7-64) Homeobox protein hox-b13 {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.89 E-value=12 Score=20.68 Aligned_cols=45 Identities=11% Similarity=0.057 Sum_probs=37.9
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHH
Q 048152 9 CGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYV 55 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk 55 (104)
...|.++...||.+++..+--+.+.=+.||..+ | -|..+|+-=|+
T Consensus 6 t~ft~~Q~~~Le~~F~~~~yp~~~~r~~LA~~l-~-l~~~qV~vWFq 50 (58)
T d2craa1 6 IPYSKGQLRELEREYAANKFITKDKRRKISAAT-S-LSERQITIWFQ 50 (58)
T ss_dssp CCSCHHHHHHHHHHHHHCSSCCHHHHHHHHHHT-C-CCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHc-C-CCHHHeeeccc
Confidence 458999999999999997766777779999999 5 89999886665
No 39
>d1ig7a_ a.4.1.1 (A:) Msx-1 homeodomain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=58.45 E-value=12 Score=20.46 Aligned_cols=45 Identities=4% Similarity=-0.030 Sum_probs=36.5
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHH
Q 048152 9 CGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYV 55 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk 55 (104)
..+|.+|...||.....-+--+.+.=+.||..+ | -|..+|.--|+
T Consensus 5 t~ft~~Ql~~Le~~F~~~~yP~~~~r~~LA~~l-~-l~~~~V~~WFq 49 (58)
T d1ig7a_ 5 TPFTTAQLLALERKFRQKQYLSIAERAEFSSSL-S-LTETQVKIWFQ 49 (58)
T ss_dssp CCCCHHHHHHHHHHHHHCSCCCHHHHHHHHHHT-T-CCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHh-C-CChhheeecCc
Confidence 469999999999999986654566679999999 5 88888875554
No 40
>d1bw5a_ a.4.1.1 (A:) Insulin gene enhancer protein isl-1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=58.31 E-value=13 Score=20.92 Aligned_cols=46 Identities=13% Similarity=0.045 Sum_probs=37.0
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHH
Q 048152 8 FCGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYV 55 (104)
Q Consensus 8 ~~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk 55 (104)
-..+|.++...||.+++..|--+...=+.||..+ | -|...|.-=|+
T Consensus 7 Rt~~t~~Q~~~Le~~F~~n~~Ps~~~~~~LA~~l-~-l~~~~V~~WFq 52 (66)
T d1bw5a_ 7 RTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMT-G-LSPRVIRVWFQ 52 (66)
T ss_dssp CCCCSHHHHHHHHHHHHHCSCCCHHHHHHHHHHH-T-SCHHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHHHHCCCCCHHHHHHHHHHc-C-cCHHHhhhhhH
Confidence 3468999999999999987755555667999999 5 88888876655
No 41
>d1s7ea1 a.4.1.1 (A:103-152) Hepatocyte nuclear factor 6 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=54.59 E-value=10 Score=19.97 Aligned_cols=45 Identities=4% Similarity=0.057 Sum_probs=34.6
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHH
Q 048152 9 CGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYV 55 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk 55 (104)
..+|.+|...||.+...-+.-+.+.=+.||..+ | -|..+|+-=|+
T Consensus 3 t~ft~~Q~~~Le~~F~~n~~P~~~~~~~LA~~l-~-l~~~~V~~WFq 47 (50)
T d1s7ea1 3 LVFTDVQRRTLHAIFKENKRPSKELQITISQQL-G-LELSTVSNFFM 47 (50)
T ss_dssp SCCCHHHHHHHHHHTTSSCSSTHHHHHHHHTTS-C-SSSHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH-C-cCHHHhhhcCC
Confidence 458999999999999876654555668899999 4 88888775543
No 42
>d2cuea1 a.4.1.1 (A:7-74) Paired box protein pax6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.61 E-value=17 Score=20.43 Aligned_cols=45 Identities=16% Similarity=0.164 Sum_probs=35.4
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHH
Q 048152 9 CGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYV 55 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk 55 (104)
..+|.++...||..+..-+--+...=+.||..+ | -|...|.-=|+
T Consensus 6 t~ft~~Ql~~Le~~F~~n~yP~~~~r~~LA~~l-~-L~~~~V~~WFq 50 (68)
T d2cuea1 6 TSFTQEQIEALEKEFERTHYPDVFARERLAAKI-D-LPEARIQVWFS 50 (68)
T ss_dssp CCSCHHHHHHHHHHHTTCSSCCHHHHHHHHHHT-T-CCHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHh-C-cChhheeecCc
Confidence 468999999999999987654555668999999 4 78888775443
No 43
>d1pufa_ a.4.1.1 (A:) Homeobox protein hox-a9 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=49.66 E-value=21 Score=20.70 Aligned_cols=45 Identities=13% Similarity=0.144 Sum_probs=36.3
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHH
Q 048152 9 CGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYV 55 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk 55 (104)
..+|.++..+||..+...|--+...=+.||..+ | -+..+|+--|+
T Consensus 18 t~ft~~Ql~~Le~~F~~~~yPs~~~r~~LA~~l-~-l~~~qV~iWFq 62 (77)
T d1pufa_ 18 CPYTKHQTLELEKEFLFNMYLTRDRRYEVARLL-N-LTERQVKIWFQ 62 (77)
T ss_dssp CCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHH-T-CCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHh-C-CCHHHhhhhhh
Confidence 459999999999999987754555558899999 5 89999975554
No 44
>d1vnda_ a.4.1.1 (A:) VND/NK-2 protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=49.32 E-value=16 Score=21.17 Aligned_cols=46 Identities=9% Similarity=0.037 Sum_probs=38.4
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHH
Q 048152 9 CGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVI 56 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~ 56 (104)
..+|.++..+||..+...+--+...=+.||..+ | -|..+|+--|+-
T Consensus 14 t~ft~~Q~~~Le~~F~~~~yP~~~~r~~LA~~l-~-l~~~qV~~WFqN 59 (77)
T d1vnda_ 14 VLFTKAQTYELERRFRQQRYLSAPEREHLASLI-R-LTPTQVKIWFQN 59 (77)
T ss_dssp CCCCTTHHHHHHHHHHHCSCCCHHHHHHHHHHH-T-CCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHh-C-CChhhhhhcchh
Confidence 359999999999999987765667779999999 5 899999877764
No 45
>d1yz8p1 a.4.1.1 (P:1-60) Pituitary homeobox 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.78 E-value=18 Score=19.74 Aligned_cols=45 Identities=11% Similarity=0.087 Sum_probs=34.6
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHH
Q 048152 9 CGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYV 55 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk 55 (104)
..+|.++...||..+...|--+...=+.||..+ | -|...|.-=|.
T Consensus 6 t~ft~~Q~~~Le~~F~~~~yP~~~~r~~LA~~l-~-l~~~~V~~WFq 50 (60)
T d1yz8p1 6 THFTSQQLQQLEATFQRNRYPDMSTREEIAVWT-N-LTEARVRVWFK 50 (60)
T ss_dssp CCCCHHHHHHHHHHHTTCSSCCTTTTTHHHHHT-T-SCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCChHHHHHHHHHH-C-CChHHHHHHhH
Confidence 569999999999999976544444457899999 4 88888876554
No 46
>d1jgga_ a.4.1.1 (A:) Even-skipped homeodomain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=46.93 E-value=19 Score=19.51 Aligned_cols=45 Identities=9% Similarity=0.062 Sum_probs=35.8
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHH
Q 048152 9 CGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYV 55 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk 55 (104)
..+|.+|...||.+...-+--+...=+.||..+ | -|...|.-=|+
T Consensus 4 t~fT~~Ql~~Le~~F~~~~yp~~~~r~~LA~~l-g-l~~~qV~vWFq 48 (57)
T d1jgga_ 4 TAFTRDQLGRLEKEFYKENYVSRPRRCELAAQL-N-LPESTIKVWFQ 48 (57)
T ss_dssp CCCCHHHHHHHHHHHHHCSCCCHHHHHHHHHHH-T-SCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHh-C-CChhHhhhcch
Confidence 358999999999999975544666669999999 5 88888875443
No 47
>d1kkxa_ a.4.3.1 (A:) Transcription regulator Adr6 (Swi1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=45.05 E-value=15 Score=22.24 Aligned_cols=31 Identities=16% Similarity=0.344 Sum_probs=26.0
Q ss_pred CchHHHHHHHcCCCCCHHHHHHHHHHHHHhhh
Q 048152 31 PHRWEVVAAMVGGTKSAEDVQKHYVILLEDLQ 62 (104)
Q Consensus 31 pdRWekIA~~vpg~KS~~eV~~ryk~L~~dV~ 62 (104)
...|..||..++- -...+++.+|...+....
T Consensus 55 ~~~W~~va~~lg~-~~~~~lr~~Y~~~L~~yE 85 (102)
T d1kkxa_ 55 TQQWSMVAQRLQI-SDYQQLESIYFRILLPYE 85 (102)
T ss_dssp SHHHHHHHHHHTC-CCHHHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHCC-ChHHHHHHHHHHHHHHHH
Confidence 4579999999976 778899999998877664
No 48
>d1zq3p1 a.4.1.1 (P:2-68) Homeotic bicoid protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=44.60 E-value=23 Score=19.80 Aligned_cols=46 Identities=9% Similarity=-0.000 Sum_probs=38.1
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHH
Q 048152 9 CGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVI 56 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~ 56 (104)
..+|.++...||..+...+--+...=..||..+ | -|...|.-=|+-
T Consensus 6 t~ft~~Ql~~Le~~F~~~~yp~~~~r~~LA~~l-~-l~~~~V~iWFqN 51 (67)
T d1zq3p1 6 TTFTSSQIAELEQHFLQGRYLTAPRLADLSAKL-A-LGTAQVKIWFKN 51 (67)
T ss_dssp CCCCHHHHHHHHHHHTTCSSCCHHHHHHHHHHH-T-SCHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHh-C-CCccceeecccc
Confidence 569999999999999987665667779999999 5 899988866653
No 49
>d1hbka_ a.11.1.1 (A:) Acyl-CoA binding protein {Plasmodium falciparum [TaxId: 5833]}
Probab=40.48 E-value=12 Score=22.41 Aligned_cols=22 Identities=32% Similarity=0.453 Sum_probs=19.4
Q ss_pred HcCCCCCHHHHHHHHHHHHHhhh
Q 048152 40 MVGGTKSAEDVQKHYVILLEDLQ 62 (104)
Q Consensus 40 ~vpg~KS~~eV~~ryk~L~~dV~ 62 (104)
.+.| .|.++.+++|-.|++.+.
T Consensus 63 ~l~g-ms~~eA~~~Yi~~v~~l~ 84 (89)
T d1hbka_ 63 SVEN-LNREDAQKRYVDIVSEIF 84 (89)
T ss_dssp HTTT-CCHHHHHHHHHHHHHHHC
T ss_pred HcCC-CCHHHHHHHHHHHHHHHc
Confidence 4678 999999999999998874
No 50
>d1le8a_ a.4.1.1 (A:) Mating type protein A1 Homeodomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=40.03 E-value=24 Score=18.74 Aligned_cols=44 Identities=16% Similarity=0.165 Sum_probs=35.9
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHH
Q 048152 10 GWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYV 55 (104)
Q Consensus 10 ~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk 55 (104)
.-|.++..+||..+..-|--+...=+.||..+ | -|..+|.--|+
T Consensus 3 ~~s~~q~~~Le~~F~~~~~P~~~~~~~LA~~l-g-l~~~qV~~WFq 46 (53)
T d1le8a_ 3 SISPQARAFLEQVFRRKQSLNSKEKEEVAKKC-G-ITPLQVRVWFI 46 (53)
T ss_dssp CCCHHHHHHHHHHHHHCSCCCHHHHHHHHHHT-T-SCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHH-C-CCHHHHHHHHH
Confidence 45889999999999987655666678999999 5 89999887665
No 51
>d2cg4a1 a.4.5.32 (A:4-66) Regulatory protein AsnC {Escherichia coli [TaxId: 562]}
Probab=39.86 E-value=26 Score=19.02 Aligned_cols=39 Identities=15% Similarity=0.072 Sum_probs=28.6
Q ss_pred HHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHHHHHh
Q 048152 17 KLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVILLED 60 (104)
Q Consensus 17 k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~L~~d 60 (104)
+..-++|..-+ .-.+..||..+ | -|...|..|.+.|.+.
T Consensus 8 ~~IL~~L~~~~---r~s~~eiA~~l-~-ls~~~v~~Ri~rL~~~ 46 (63)
T d2cg4a1 8 RGILEALMGNA---RTAYAELAKQF-G-VSPETIHVRVEKMKQA 46 (63)
T ss_dssp HHHHHHHHHCT---TSCHHHHHHHH-T-SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC---CCCHHHHHHHH-C-cCHHHHHHHHHHHHHC
Confidence 33344455443 33579999999 5 9999999999999764
No 52
>d1p7ia_ a.4.1.1 (A:) Engrailed Homeodomain {Drosophila melanogaster [TaxId: 7227]}
Probab=38.04 E-value=26 Score=18.55 Aligned_cols=45 Identities=9% Similarity=0.113 Sum_probs=35.5
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHH
Q 048152 9 CGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYV 55 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk 55 (104)
...|.++...||..+...+--+.+.=+.||..+ | -|...|+-=|+
T Consensus 4 t~ft~~Q~~~Le~~F~~~~yp~~~~r~~LA~~l-g-L~~~qV~vWFq 48 (53)
T d1p7ia_ 4 TAFSSEQLARLKREFNENRYLTERRRQQLSSEL-G-LNEAQIKIWFQ 48 (53)
T ss_dssp CCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHH-T-CCHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHh-C-CChHHhhhccc
Confidence 458999999999999987655555668899999 5 88888875543
No 53
>d1lfba_ a.4.1.1 (A:) Hepatocyte nuclear factor 1a (LFB1/HNF1) {Rat (Rattus rattus) [TaxId: 10117]}
Probab=36.68 E-value=36 Score=19.69 Aligned_cols=32 Identities=9% Similarity=0.137 Sum_probs=26.5
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCchHHHHHHHc
Q 048152 10 GWSWEENKLFELALAVVDEQDPHRWEVVAAMV 41 (104)
Q Consensus 10 ~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~v 41 (104)
.||.++..+||.....-+--+.+.=+.||..+
T Consensus 3 ~~tp~Ql~~Le~~F~~n~yPs~~~Re~LA~~l 34 (78)
T d1lfba_ 3 KWGPASQQILFQAYERQKNPSKEERETLVEEC 34 (78)
T ss_dssp CCCHHHHHHHHHHHTTCSSCCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 69999999999999986554666668888887
No 54
>d1hb6a_ a.11.1.1 (A:) Acyl-CoA binding protein {Cow (Bos taurus) [TaxId: 9913]}
Probab=36.30 E-value=16 Score=21.67 Aligned_cols=28 Identities=32% Similarity=0.648 Sum_probs=21.6
Q ss_pred hHHHHHHHcCCCCCHHHHHHHHHHHHHhhh
Q 048152 33 RWEVVAAMVGGTKSAEDVQKHYVILLEDLQ 62 (104)
Q Consensus 33 RWekIA~~vpg~KS~~eV~~ryk~L~~dV~ 62 (104)
.|+.-.+ +.| .|.++.++.|-.|++++.
T Consensus 54 Kw~AW~~-~~g-ms~~eA~~~YI~~v~~l~ 81 (86)
T d1hb6a_ 54 KWDAWNE-LKG-TSKEDAMKAYIDKVEELK 81 (86)
T ss_dssp HHHHHHH-TTT-CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-cCC-CCHHHHHHHHHHHHHHHH
Confidence 3444443 467 999999999999998875
No 55
>d2ecba1 a.4.1.1 (A:8-83) Zinc fingers and homeoboxes protein 1, ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.64 E-value=35 Score=19.31 Aligned_cols=51 Identities=8% Similarity=0.100 Sum_probs=41.0
Q ss_pred CCCCCCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHHH
Q 048152 5 PKVFCGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVIL 57 (104)
Q Consensus 5 ~~~~~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~L 57 (104)
|..-..=|.++..+||..+...+--+...=+.||..+ | -|..+|.-=|+.-
T Consensus 5 p~k~k~~T~~Q~~~Le~~F~~~~~P~~~~r~~LA~~l-~-l~~~~V~~WFqNr 55 (76)
T d2ecba1 5 PQKFKEKTAEQLRVLQASFLNSSVLTDEELNRLRAQT-K-LTRREIDAWFTEK 55 (76)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHT-C-CCHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHh-C-CCHHHHHHhHHHH
Confidence 4444455999999999999987765666779999999 5 9999999777654
No 56
>d1vp7a_ a.7.13.1 (A:) Exonuclease VII small subunit XseB {Bordetella pertussis [TaxId: 520]}
Probab=34.08 E-value=9 Score=22.16 Aligned_cols=12 Identities=17% Similarity=0.050 Sum_probs=5.2
Q ss_pred CCHHHHHHHHHH
Q 048152 45 KSAEDVQKHYVI 56 (104)
Q Consensus 45 KS~~eV~~ryk~ 56 (104)
-+.++....|+.
T Consensus 27 l~Leesl~~ye~ 38 (68)
T d1vp7a_ 27 LPLEQSLSAYRR 38 (68)
T ss_dssp SCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 344444444443
No 57
>d2cyya1 a.4.5.32 (A:5-64) Putative transcriptional regulator PH1519 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=33.07 E-value=33 Score=18.29 Aligned_cols=39 Identities=13% Similarity=0.089 Sum_probs=28.6
Q ss_pred HHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHHHHHh
Q 048152 17 KLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVILLED 60 (104)
Q Consensus 17 k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~L~~d 60 (104)
+..-.+|..- ..-.+..||..+ | -|...|..|.+.|.++
T Consensus 6 ~~Il~~L~~n---~r~s~~eiA~~l-~-ls~~~v~~Ri~~L~~~ 44 (60)
T d2cyya1 6 KKIIKILQND---GKAPLREISKIT-G-LAESTIHERIRKLRES 44 (60)
T ss_dssp HHHHHHHHHC---TTCCHHHHHHHH-C-SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHc---CCCCHHHHHHHH-C-cCHHHHHHHHHHHHHC
Confidence 3344455553 333589999999 5 9999999999999654
No 58
>d1b72a_ a.4.1.1 (A:) Homeobox protein hox-b1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.86 E-value=44 Score=19.62 Aligned_cols=44 Identities=11% Similarity=0.069 Sum_probs=35.9
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHH
Q 048152 10 GWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYV 55 (104)
Q Consensus 10 ~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk 55 (104)
..|.+|...||..+...+--+.+.=+.||..+ | -|...|+-=|+
T Consensus 33 ~ft~~Ql~~Le~~F~~n~yPs~~~r~~LA~~l-~-l~~~~V~vWFq 76 (88)
T d1b72a_ 33 NFTTRQLTELEKEFHFNKYLSRARRVEIAATL-E-LNETQVKIWFQ 76 (88)
T ss_dssp CCCHHHHHHHHHHHTTCSSCCHHHHHHHHHHH-T-CCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCCCchHHHHHHHHHc-C-CCHHHeeeccH
Confidence 48999999999999987654555668999999 5 89999876554
No 59
>d2e1oa1 a.4.1.1 (A:8-64) Homeobox protein prh {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.78 E-value=36 Score=18.26 Aligned_cols=45 Identities=16% Similarity=0.181 Sum_probs=36.0
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHH
Q 048152 9 CGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYV 55 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk 55 (104)
..+|.+|..+||..+...+--+...=+.||..+ | -|..+|.-=|+
T Consensus 5 ~~ft~~Q~~~Le~~F~~n~yp~~~~r~~LA~~l-~-L~~~qV~~WFq 49 (57)
T d2e1oa1 5 VRFSNDQTIELEKKFETQKYLSPPERKRLAKML-Q-LSERQVKTWFQ 49 (57)
T ss_dssp CCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHT-T-CCHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHh-C-CCHHHhhHhhh
Confidence 468999999999999987654555668999999 5 88888876544
No 60
>d2cfxa1 a.4.5.32 (A:1-63) Transcriptional regulator LrpC {Bacillus subtilis [TaxId: 1423]}
Probab=31.34 E-value=38 Score=18.37 Aligned_cols=39 Identities=10% Similarity=-0.064 Sum_probs=28.5
Q ss_pred HHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHHHHH
Q 048152 16 NKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVILLE 59 (104)
Q Consensus 16 ~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~L~~ 59 (104)
|+..=.+|..-+. -....||..+ | -|...|.+|.+.|.+
T Consensus 7 D~~IL~~L~~n~r---~s~~~iA~~l-g-is~~tv~~Ri~~L~~ 45 (63)
T d2cfxa1 7 DLNIIEELKKDSR---LSMRELGRKI-K-LSPPSVTERVRQLES 45 (63)
T ss_dssp HHHHHHHHHHCSC---CCHHHHHHHH-T-CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC---CCHHHHHHHH-C-cCHHHHHHHHHHHHH
Confidence 3444455655443 2478999999 5 999999999998864
No 61
>d2cufa1 a.4.1.1 (A:8-89) Homeobox-containing protein 1, HMBOX1 (Flj21616) {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.59 E-value=46 Score=19.09 Aligned_cols=33 Identities=18% Similarity=0.152 Sum_probs=25.5
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHc
Q 048152 9 CGWSWEENKLFELALAVVDEQDPHRWEVVAAMV 41 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~v 41 (104)
..||.++.+.||.....-+--+.+.=+.||..+
T Consensus 5 ~~ft~~Ql~~LE~~F~~n~yP~~~~R~~LA~~~ 37 (82)
T d2cufa1 5 FTWRKECLAVMESYFNENQYPDEAKREEIANAC 37 (82)
T ss_dssp CCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 469999999999999986543444557788776
No 62
>d1i1ga1 a.4.5.32 (A:2-61) LprA {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=28.66 E-value=41 Score=18.00 Aligned_cols=38 Identities=21% Similarity=0.173 Sum_probs=27.7
Q ss_pred HHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHHHHHh
Q 048152 18 LFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVILLED 60 (104)
Q Consensus 18 ~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~L~~d 60 (104)
..-.+|..-+. --...||..+ | -|...|..|.+.|.++
T Consensus 7 kIl~~L~~n~r---~s~~~lA~~~-g-ls~~~v~~Ri~~L~~~ 44 (60)
T d1i1ga1 7 IILEILEKDAR---TPFTEIAKKL-G-ISETAVRKRVKALEEK 44 (60)
T ss_dssp HHHHHHHHCTT---CCHHHHHHHH-T-SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCC---CCHHHHHHHH-C-cCHHHHHHHHHHHHHC
Confidence 33445554432 2468999999 5 9999999999999664
No 63
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=28.44 E-value=46 Score=18.48 Aligned_cols=47 Identities=17% Similarity=0.262 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHHhhcC-CCCCchHHHHHHHcCCCCCHHHHHHHHHHHHH
Q 048152 12 SWEENKLFELALAVVD-EQDPHRWEVVAAMVGGTKSAEDVQKHYVILLE 59 (104)
Q Consensus 12 T~eE~k~fE~ALa~~p-~~~pdRWekIA~~vpg~KS~~eV~~ryk~L~~ 59 (104)
|.-|.++|+-.-..+. .+.|--...||.+++= +|..-|..|-+.|.+
T Consensus 4 T~rQ~~vL~~I~~~~~~~G~~Ps~rei~~~~g~-~S~stv~~~l~~Le~ 51 (71)
T d1jhfa1 4 TARQQEVFDLIRDHISQTGMPPTRAEIAQRLGF-RSPNAAEEHLKALAR 51 (71)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCCCHHHHHHHTTC-SSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHH
Confidence 6677777776555443 2555568999999976 899999999777743
No 64
>d2irfg_ a.4.5.23 (G:) Interferon regulatory factor-2, IRF-2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.43 E-value=3.2 Score=26.42 Aligned_cols=12 Identities=17% Similarity=0.072 Sum_probs=9.2
Q ss_pred hhhhcCCCCCCc
Q 048152 61 LQFIESGKLDHK 72 (104)
Q Consensus 61 V~~IEsG~v~~~ 72 (104)
|..|+||.+|.-
T Consensus 9 ~~qi~sg~ypGL 20 (109)
T d2irfg_ 9 EEQINSNTIPGL 20 (109)
T ss_dssp HHHHHTTCSTTC
T ss_pred HHHhccCCCCCC
Confidence 567899999743
No 65
>d1x2ma1 a.4.1.1 (A:8-59) Lag1 longevity assurance homolog 6, LASS6 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.18 E-value=39 Score=17.86 Aligned_cols=42 Identities=14% Similarity=0.293 Sum_probs=31.3
Q ss_pred CHHHHHHHHHHHhhc-CCCCCchHHHHHHHcCCCCCHHHHHHHHH
Q 048152 12 SWEENKLFELALAVV-DEQDPHRWEVVAAMVGGTKSAEDVQKHYV 55 (104)
Q Consensus 12 T~eE~k~fE~ALa~~-p~~~pdRWekIA~~vpg~KS~~eV~~ryk 55 (104)
|.++..+||..+... +--+...=+.||..+ | -|..+|.-=|+
T Consensus 1 T~~q~~iLE~~F~~~~~~P~~~~~~~LA~~~-~-ls~~qV~~WFq 43 (52)
T d1x2ma1 1 TAQPNAILEKVFTAITKHPDEKRLEGLSKQL-D-WDVRSIQRWFR 43 (52)
T ss_dssp SSCHHHHHHHHHHTTCSSCCHHHHHHHHHHH-C-SCHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHcCCCcCHHHHHHHHHHH-C-cCHHHHHHHHH
Confidence 567889999999763 323455668999999 5 89999886664
No 66
>d1uhsa_ a.4.1.1 (A:) Homeodomain-only protein, Hop {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.60 E-value=51 Score=18.67 Aligned_cols=48 Identities=21% Similarity=0.295 Sum_probs=36.2
Q ss_pred CCCCCHHHHHHHHHHHhhcCC-CCCchHHHHHHHcCCCCCHHHHHHHHHHH
Q 048152 8 FCGWSWEENKLFELALAVVDE-QDPHRWEVVAAMVGGTKSAEDVQKHYVIL 57 (104)
Q Consensus 8 ~~~WT~eE~k~fE~ALa~~p~-~~pdRWekIA~~vpg~KS~~eV~~ryk~L 57 (104)
...-|.+|...||.++.+.+. -+...=+.||..+ | -+...|.-=|+.=
T Consensus 5 r~~fT~~Ql~~Le~~F~~~n~yP~~~~r~~LA~~l-g-L~~~~VqvWFqNr 53 (72)
T d1uhsa_ 5 AATMTEDQVEILEYNFNKVNKHPDPTTLCLIAAEA-G-LTEEQTQKWFKQR 53 (72)
T ss_dssp CCCCCHHHHHHHHHHHHSSCSSCCHHHHHHHHHHH-T-CCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHccccCCHHHHHHHHHHh-C-CCHHHHHHHHHHH
Confidence 456799999999999976432 2445669999999 5 8999998666543
No 67
>d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.67 E-value=44 Score=22.03 Aligned_cols=45 Identities=20% Similarity=0.215 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHHHH
Q 048152 14 EENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVILL 58 (104)
Q Consensus 14 eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~L~ 58 (104)
+-.++|++||..++...+.-|...|...-.....+.++.-|+.++
T Consensus 82 ~a~~i~~ral~~~~p~~~~l~~~ya~~~~~~~~~~~a~~i~~~~l 126 (308)
T d2onda1 82 EAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLL 126 (308)
T ss_dssp HHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 445789999988777677777766655533345677777777654
No 68
>d1ocpa_ a.4.1.1 (A:) Oct-3 POU Homeodomain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.30 E-value=59 Score=17.97 Aligned_cols=46 Identities=9% Similarity=0.019 Sum_probs=36.2
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHH
Q 048152 8 FCGWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYV 55 (104)
Q Consensus 8 ~~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk 55 (104)
-..+|.++.+.||..+...|--+...=+.||..+ | -|...|.-=|+
T Consensus 12 Rt~~t~~q~~~Le~~F~~n~~P~~~~r~~La~~~-~-l~~~~V~~WFq 57 (67)
T d1ocpa_ 12 RTSIENRVRWSLETMFLKCPKPSLQQITHIANQL-G-LEKDVVRVWFC 57 (67)
T ss_dssp CSSCCHHHHHHHHHHHSSCSCCCHHHHHHHHHHH-T-CCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHccCCCHHHHHHHHHHH-c-CCHHHHHHHhH
Confidence 3468999999999999987654555668899999 5 88888876554
No 69
>d1c20a_ a.4.3.1 (A:) DNA-binding domain from the dead ringer protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=21.60 E-value=55 Score=20.18 Aligned_cols=36 Identities=14% Similarity=0.188 Sum_probs=25.9
Q ss_pred chHHHHHHHcCCCC---C-HHHHHHHHHHHHHhhhhhcCC
Q 048152 32 HRWEVVAAMVGGTK---S-AEDVQKHYVILLEDLQFIESG 67 (104)
Q Consensus 32 dRWekIA~~vpg~K---S-~~eV~~ryk~L~~dV~~IEsG 67 (104)
.+|..||..++-.. + ...++.+|...+........+
T Consensus 74 ~~W~~va~~lg~~~~~~~~~~~L~~~Y~k~L~~fE~~~~~ 113 (128)
T d1c20a_ 74 KLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKN 113 (128)
T ss_dssp TTHHHHHHHTCCCSSCCSHHHHHHHHHHHHTHHHHHHHHC
T ss_pred ccHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHHHHHhc
Confidence 46999999996422 2 457899999887776655554
No 70
>d2pi0a1 a.4.5.23 (A:5-110) Interferon regulatory factor 3, IRF-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.57 E-value=4.1 Score=25.82 Aligned_cols=12 Identities=17% Similarity=0.404 Sum_probs=9.2
Q ss_pred hhhhcCCCCCCc
Q 048152 61 LQFIESGKLDHK 72 (104)
Q Consensus 61 V~~IEsG~v~~~ 72 (104)
|..|+||.+|.-
T Consensus 9 ~~~i~sg~ypGL 20 (106)
T d2pi0a1 9 VSQLDLGQLEGV 20 (106)
T ss_dssp HHHHHHCCSTTC
T ss_pred HHHhccCCCCCC
Confidence 567899999743
No 71
>d1pula1 a.39.1.11 (A:18-120) Hypothetical protein c32e8.3 {Caenorhabditis elegans [TaxId: 6239]}
Probab=21.44 E-value=55 Score=20.03 Aligned_cols=45 Identities=16% Similarity=0.214 Sum_probs=32.0
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCchHHHHHHHcCCCCCHHHHHHHHHHHHHhhhhhcCCCC
Q 048152 10 GWSWEENKLFELALAVVDEQDPHRWEVVAAMVGGTKSAEDVQKHYVILLEDLQFIESGKL 69 (104)
Q Consensus 10 ~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~vpg~KS~~eV~~ryk~L~~dV~~IEsG~v 69 (104)
.|+..+.+..-.|.+.|..++. ..+-| ++|..|+.|..-|++-.+
T Consensus 1 ~~~~~~l~~~F~aF~~FG~~~~-------~em~~--------~~f~Kl~kdc~lid~K~~ 45 (103)
T d1pula1 1 NWDDADVKKRWDAFTKFGAATA-------TEMTG--------KNFDKWLKDAGVLDNKAI 45 (103)
T ss_dssp CCCHHHHHHHHHHHHHHTCSSS-------SCCCH--------HHHHHHHHHHTSCCSSSS
T ss_pred CCcHHHHHHHHHHHHHhcCCCC-------cCCCH--------HHHHHHHHHcCCCcCCCC
Confidence 3999999999999999975432 12545 677777777776655433
No 72
>d1x58a1 a.4.1.1 (A:8-56) Hypothetical protein 4930532d21rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.16 E-value=63 Score=17.45 Aligned_cols=45 Identities=18% Similarity=0.322 Sum_probs=36.1
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCchHHHHHHHc---CCCCCHHHHHHHHHHHH
Q 048152 9 CGWSWEENKLFELALAVVDEQDPHRWEVVAAMV---GGTKSAEDVQKHYVILL 58 (104)
Q Consensus 9 ~~WT~eE~k~fE~ALa~~p~~~pdRWekIA~~v---pg~KS~~eV~~ryk~L~ 58 (104)
..||.||.--+-+...+|.- -|..|-=.. || |+..++-..|..|.
T Consensus 2 knft~eEv~YL~~GVK~~G~----~WNsILWs~PF~~G-R~~vdLA~Ky~~l~ 49 (49)
T d1x58a1 2 KDFTKEEVNYLFHGVKTMGN----HWNSILWSFPFQKG-RRAVDLAHKYHRLI 49 (49)
T ss_dssp SSCCHHHHHHHHHHHHHHCS----CHHHHHHHSCCCTT-CCHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHhcc----hhhhhhhccCCCCC-chhhHHHHHHHhhC
Confidence 35999999988888888864 588886555 58 99999999998773
Done!