Query 048154
Match_columns 121
No_of_seqs 110 out of 1208
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 06:48:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048154.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048154hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0156 Cytochrome P450 CYP2 s 100.0 2.6E-35 5.6E-40 206.5 12.2 118 3-121 287-404 (489)
2 KOG0158 Cytochrome P450 CYP3/C 100.0 7.7E-35 1.7E-39 203.1 11.3 119 1-121 293-412 (499)
3 PLN02971 tryptophan N-hydroxyl 100.0 1.7E-33 3.6E-38 200.7 11.5 119 2-121 327-445 (543)
4 PLN02394 trans-cinnamate 4-mon 100.0 1.8E-32 3.8E-37 193.9 12.0 118 3-121 294-411 (503)
5 PTZ00404 cytochrome P450; Prov 100.0 2.7E-32 5.9E-37 192.1 12.6 118 3-121 284-402 (482)
6 PLN02500 cytochrome P450 90B1 100.0 4.2E-32 9.2E-37 191.5 12.2 118 2-121 279-401 (490)
7 PLN02183 ferulate 5-hydroxylas 100.0 8.1E-32 1.8E-36 191.1 12.0 118 2-121 304-421 (516)
8 PLN03234 cytochrome P450 83B1; 100.0 1.1E-31 2.5E-36 189.6 12.0 119 2-121 288-407 (499)
9 PLN00168 Cytochrome P450; Prov 100.0 1.6E-31 3.4E-36 189.7 12.2 119 2-121 306-425 (519)
10 PLN02290 cytokinin trans-hydro 100.0 1.9E-31 4.2E-36 189.1 11.2 116 3-121 317-433 (516)
11 PLN02966 cytochrome P450 83A1 100.0 3.6E-31 7.7E-36 187.3 11.7 119 2-121 289-410 (502)
12 PLN03112 cytochrome P450 famil 100.0 3E-31 6.6E-36 188.0 11.2 119 2-121 296-414 (514)
13 PLN03018 homomethionine N-hydr 100.0 6E-31 1.3E-35 187.2 12.7 119 2-121 314-432 (534)
14 PLN00110 flavonoid 3',5'-hydro 100.0 4E-31 8.7E-36 187.1 11.4 119 2-121 289-407 (504)
15 PLN02655 ent-kaurene oxidase 100.0 6.2E-31 1.4E-35 184.7 11.8 118 2-121 262-379 (466)
16 PLN02738 carotene beta-ring hy 100.0 4.7E-31 1E-35 190.4 11.3 117 2-121 391-507 (633)
17 PF00067 p450: Cytochrome P450 100.0 3E-31 6.5E-36 183.6 9.3 119 2-121 262-380 (463)
18 PLN02687 flavonoid 3'-monooxyg 100.0 7.7E-31 1.7E-35 186.1 11.4 119 2-121 297-415 (517)
19 PLN02774 brassinosteroid-6-oxi 100.0 1.7E-30 3.6E-35 182.4 12.0 118 2-121 264-384 (463)
20 PLN02169 fatty acid (omega-1)- 100.0 2.1E-30 4.6E-35 183.3 10.9 112 2-121 301-414 (500)
21 PLN02426 cytochrome P450, fami 100.0 3.8E-30 8.3E-35 182.1 11.5 118 2-121 293-413 (502)
22 PLN03195 fatty acid omega-hydr 100.0 3.3E-30 7.1E-35 182.9 10.2 118 2-121 292-431 (516)
23 PLN03141 3-epi-6-deoxocathaste 100.0 7.7E-30 1.7E-34 178.6 11.7 118 2-121 251-372 (452)
24 KOG0159 Cytochrome P450 CYP11/ 100.0 5.1E-30 1.1E-34 177.3 9.6 116 4-121 318-434 (519)
25 PLN02936 epsilon-ring hydroxyl 100.0 1E-29 2.2E-34 179.5 11.1 118 2-121 278-395 (489)
26 PLN02196 abscisic acid 8'-hydr 100.0 2.1E-29 4.6E-34 176.9 11.5 118 2-121 264-384 (463)
27 KOG0157 Cytochrome P450 CYP4/C 100.0 2.8E-29 6E-34 177.4 10.0 118 2-121 291-411 (497)
28 PLN02302 ent-kaurenoic acid ox 100.0 5.5E-29 1.2E-33 175.5 11.5 118 2-121 287-408 (490)
29 PLN02987 Cytochrome P450, fami 100.0 4.3E-28 9.3E-33 170.6 12.0 118 2-121 267-387 (472)
30 PLN02648 allene oxide synthase 99.9 5.7E-26 1.2E-30 159.9 11.5 101 20-121 289-395 (480)
31 COG2124 CypX Cytochrome P450 [ 99.9 6.4E-26 1.4E-30 157.3 9.3 103 1-121 235-337 (411)
32 KOG0684 Cytochrome P450 [Secon 99.9 1.4E-25 3.1E-30 153.0 9.5 120 1-121 271-395 (486)
33 PF08285 DPM3: Dolichol-phosph 79.1 7.9 0.00017 21.7 4.4 36 11-48 46-81 (91)
34 PF12508 DUF3714: Protein of u 78.0 2.4 5.2E-05 27.3 2.4 43 62-106 52-94 (200)
35 PF05952 ComX: Bacillus compet 71.7 5.6 0.00012 20.2 2.3 18 25-42 4-21 (57)
36 PRK06789 flagellar motor switc 68.9 6.7 0.00015 21.0 2.4 41 68-108 21-63 (74)
37 PF14550 Peptidase_U35_2: Puta 49.1 13 0.00027 22.1 1.4 21 86-106 72-92 (122)
38 TIGR03779 Bac_Flav_CT_M Bacter 48.9 17 0.00036 26.3 2.2 21 87-107 278-298 (410)
39 PRK05933 type III secretion sy 45.0 27 0.00058 24.5 2.7 44 65-108 317-363 (372)
40 PF11138 DUF2911: Protein of u 43.3 25 0.00054 21.5 2.1 24 85-108 50-73 (145)
41 PF01629 DUF22: Domain of unkn 41.5 26 0.00057 20.4 2.0 23 93-115 59-81 (112)
42 PF14824 Sirohm_synth_M: Siroh 40.6 36 0.00078 14.8 2.5 15 33-47 15-29 (30)
43 PF07849 DUF1641: Protein of u 39.7 44 0.00096 15.6 2.6 19 24-42 13-31 (42)
44 TIGR01260 ATP_synt_c ATP synth 36.9 61 0.0013 16.4 3.1 23 21-43 11-33 (58)
45 PF14483 Cut8_M: Cut8 dimerisa 33.8 55 0.0012 15.0 2.7 22 21-42 13-35 (38)
46 PF15300 INT_SG_DDX_CT_C: INTS 33.2 30 0.00065 18.1 1.2 13 63-75 41-53 (65)
47 PF06522 B12D: NADH-ubiquinone 31.6 34 0.00073 18.2 1.3 17 21-37 19-35 (73)
48 COG1886 FliN Flagellar motor s 31.4 61 0.0013 19.5 2.5 42 66-107 83-126 (136)
49 PLN03044 GTP cyclohydrolase I; 30.8 1E+02 0.0022 19.8 3.5 27 22-48 103-129 (188)
50 cd00642 GTP_cyclohydro1 GTP cy 29.8 1E+02 0.0023 19.7 3.4 27 22-48 102-128 (185)
51 MTH00222 ATP9 ATP synthase F0 29.5 1E+02 0.0022 16.7 3.3 23 21-43 29-51 (77)
52 PF06596 PsbX: Photosystem II 28.5 74 0.0016 14.8 3.4 32 4-36 5-36 (39)
53 TIGR00063 folE GTP cyclohydrol 28.5 1.1E+02 0.0025 19.4 3.4 27 22-48 97-123 (180)
54 PF11059 DUF2860: Protein of u 28.0 53 0.0011 22.7 2.0 26 96-121 81-106 (297)
55 COG1417 Uncharacterized conser 27.7 49 0.0011 22.5 1.7 23 91-113 86-108 (288)
56 COG0302 FolE GTP cyclohydrolas 27.2 1.5E+02 0.0033 19.2 3.8 27 22-48 111-137 (195)
57 COG4732 Predicted membrane pro 26.0 1.7E+02 0.0038 18.2 4.1 34 8-42 136-169 (177)
58 PRK12606 GTP cyclohydrolase I; 25.8 1.4E+02 0.003 19.5 3.5 27 22-48 117-143 (201)
59 COG3106 Predicted ATPase [Gene 25.8 2.3E+02 0.005 20.7 4.7 84 37-121 2-99 (467)
60 PRK13466 F0F1 ATP synthase sub 25.6 1.1E+02 0.0024 16.0 3.6 24 21-44 21-44 (66)
61 PRK05880 F0F1 ATP synthase sub 24.3 1.4E+02 0.0029 16.4 4.1 24 21-44 30-53 (81)
62 KOG4189 Uncharacterized conser 24.3 1.4E+02 0.003 19.5 3.2 27 21-47 152-178 (209)
63 PRK13467 F0F1 ATP synthase sub 24.2 1.2E+02 0.0026 15.9 4.3 23 21-43 21-43 (66)
64 PRK09347 folE GTP cyclohydrola 23.6 1.5E+02 0.0032 19.1 3.3 27 22-48 105-131 (188)
65 PF10264 Stork_head: Winged he 23.4 1.3E+02 0.0028 16.5 2.6 38 21-58 14-53 (80)
66 PF09500 YiiD_Cterm: Putative 23.3 1.1E+02 0.0023 18.7 2.6 22 11-32 46-67 (144)
67 PRK03636 hypothetical protein; 23.2 65 0.0014 20.5 1.7 22 21-42 24-45 (179)
68 PRK03057 hypothetical protein; 21.5 66 0.0014 20.5 1.4 33 9-41 10-42 (180)
69 PF11998 DUF3493: Protein of u 21.4 93 0.002 16.8 1.8 15 33-47 2-16 (75)
70 PRK13990 cell division topolog 21.1 1.1E+02 0.0024 17.1 2.1 17 34-50 42-58 (90)
71 PF06249 EutQ: Ethanolamine ut 20.9 73 0.0016 19.7 1.5 13 96-108 123-135 (152)
72 PRK13989 cell division topolog 20.1 97 0.0021 17.0 1.8 17 34-50 37-53 (84)
73 PF01227 GTP_cyclohydroI: GTP 20.0 1E+02 0.0022 19.6 2.1 28 21-48 96-123 (179)
No 1
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.6e-35 Score=206.54 Aligned_cols=118 Identities=36% Similarity=0.631 Sum_probs=110.0
Q ss_pred hHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCcccCCCCHHHHHHHHHHhccCCCCCCC
Q 048154 3 VIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGAKRQVNESDIKNLVYLRAILMETMHLYPVAPLQ 82 (121)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~l~~l~~~~~E~~r~~~~~~~~ 82 (121)
+.+.++.+++||.+||+ +++.|++.+|++||++|+|+++||+++.|.++.++.+++.++||++|+++|++|++|++|..
T Consensus 287 i~~~~~dl~~AGtdTta-~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~ 365 (489)
T KOG0156|consen 287 LKALILDLFLAGTDTTA-TTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLL 365 (489)
T ss_pred HHHHHHHHHhcccchHH-HHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCcccc
Confidence 34444556677777776 99999999999999999999999999999988899999999999999999999999999999
Q ss_pred CceeccCCceecceeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 83 LPHQSMEDCTVSGYHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 83 ~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
++|.+.+|+.++||.||+||.|+++.|++||||++|+||
T Consensus 366 ~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP 404 (489)
T KOG0156|consen 366 LPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDP 404 (489)
T ss_pred ccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCc
Confidence 999999999999999999999999999999999999998
No 2
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.7e-35 Score=203.09 Aligned_cols=119 Identities=26% Similarity=0.519 Sum_probs=113.5
Q ss_pred ChhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCcccCCCCHHHHHHHHHHhccCCCCC
Q 048154 1 MDVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGAKRQVNESDIKNLVYLRAILMETMHLYPVAP 80 (121)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~l~~l~~~~~E~~r~~~~~~ 80 (121)
+|++++++.+++||++||+ +++++++|+|++||++|+||++||+++..+...++.+.+.+|+|+++|++|++|+||+++
T Consensus 293 dei~aQafvFl~AGfeTts-~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~ 371 (499)
T KOG0158|consen 293 DEIAAQAFVFLLAGFETTA-STLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAP 371 (499)
T ss_pred HHHHHHHHHHHHhhhHhHH-HHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcc
Confidence 4789999999999999988 999999999999999999999999999776555999999999999999999999999999
Q ss_pred CCCceeccCCceec-ceeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 81 LQLPHQSMEDCTVS-GYHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 81 ~~~~r~~~~~~~~~-g~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
.. .|.+.+|..+. ++.||+|+.|.++.+++||||++||||
T Consensus 372 ~~-~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~P 412 (499)
T KOG0158|consen 372 FL-NRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEP 412 (499)
T ss_pred cc-cceecCceecCCCeEeCCCCEEEeecccccCCcccCCCc
Confidence 95 89999999999 999999999999999999999999998
No 3
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=1.7e-33 Score=200.71 Aligned_cols=119 Identities=34% Similarity=0.600 Sum_probs=110.5
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCcccCCCCHHHHHHHHHHhccCCCCCC
Q 048154 2 DVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGAKRQVNESDIKNLVYLRAILMETMHLYPVAPL 81 (121)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~l~~l~~~~~E~~r~~~~~~~ 81 (121)
+++..++.+++||.+||+ ++++|++++|++||++|+|+++||+++++++..++.+++.+|||++++++|++|++|+++.
T Consensus 327 ~i~~~~~~l~~AG~dTTa-~tl~~~l~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~ 405 (543)
T PLN02971 327 EIKPTIKELVMAAPDNPS-NAVEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAF 405 (543)
T ss_pred HHHHhHHHHheeccchHH-HHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccc
Confidence 455566677778888777 9999999999999999999999999999887888999999999999999999999999998
Q ss_pred CCceeccCCceecceeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 82 QLPHQSMEDCTVSGYHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 82 ~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
.++|.+.+|+.++||.||||+.|.++.|++||||++|+||
T Consensus 406 ~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP 445 (543)
T PLN02971 406 NLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDP 445 (543)
T ss_pred CcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCc
Confidence 7789999999999999999999999999999999999998
No 4
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00 E-value=1.8e-32 Score=193.87 Aligned_cols=118 Identities=32% Similarity=0.523 Sum_probs=107.5
Q ss_pred hHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCcccCCCCHHHHHHHHHHhccCCCCCCC
Q 048154 3 VIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGAKRQVNESDIKNLVYLRAILMETMHLYPVAPLQ 82 (121)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~l~~l~~~~~E~~r~~~~~~~~ 82 (121)
++..+..+++||.+||+ ++++|++++|++||++|+++++|++++++.+..++.+++.++||+++|++|++|++|+++..
T Consensus 294 i~~~~~~~~~AG~dTTa-~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~ 372 (503)
T PLN02394 294 VLYIVENINVAAIETTL-WSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLL 372 (503)
T ss_pred HHHHHHHHHHhchhhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccc
Confidence 34445556678888777 99999999999999999999999999998766678888999999999999999999999998
Q ss_pred CceeccCCceecceeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 83 LPHQSMEDCTVSGYHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 83 ~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
.+|.+.+|+.++|+.||+|+.|.++.|++||||++|+||
T Consensus 373 ~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P 411 (503)
T PLN02394 373 VPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNP 411 (503)
T ss_pred cceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCc
Confidence 789999999999999999999999999999999999987
No 5
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=2.7e-32 Score=192.08 Aligned_cols=118 Identities=22% Similarity=0.383 Sum_probs=109.5
Q ss_pred hHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCcccCCCCHHHHHHHHHHhccCCCCCCC
Q 048154 3 VIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGAKRQVNESDIKNLVYLRAILMETMHLYPVAPLQ 82 (121)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~l~~l~~~~~E~~r~~~~~~~~ 82 (121)
++.+++.+++||.+||+ ++++|++++|++||++|+++++|+++++++...++.+++.+|||++++++|++|++|+++..
T Consensus 284 i~~~~~~~~~AG~dTta-~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~ 362 (482)
T PTZ00404 284 ILATILDFFLAGVDTSA-TSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFG 362 (482)
T ss_pred HHHHHHHHHHhccchHH-HHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccc
Confidence 55677777888888777 99999999999999999999999999998766788899999999999999999999999976
Q ss_pred CceeccCCcee-cceeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 83 LPHQSMEDCTV-SGYHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 83 ~~r~~~~~~~~-~g~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
++|.+.+|+.+ +|+.||+|+.|.++.+++||||++|+||
T Consensus 363 ~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP 402 (482)
T PTZ00404 363 LPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENP 402 (482)
T ss_pred cceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCc
Confidence 68999999999 9999999999999999999999999998
No 6
>PLN02500 cytochrome P450 90B1
Probab=99.98 E-value=4.2e-32 Score=191.50 Aligned_cols=118 Identities=18% Similarity=0.305 Sum_probs=106.5
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhc-----CCCCCCcccCCCCHHHHHHHHHHhccC
Q 048154 2 DVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVG-----AKRQVNESDIKNLVYLRAILMETMHLY 76 (121)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~-----~~~~~~~~~~~~l~~l~~~~~E~~r~~ 76 (121)
+++..+..++++|.+||+ ++++|++++|++||++|+|+++|++++.+ +...++.+++.++||++++++|++|++
T Consensus 279 ~i~~~~~~ll~AG~dTta-~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~ 357 (490)
T PLN02500 279 QILDLILSLLFAGHETSS-VAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLG 357 (490)
T ss_pred HHHHHHHHHHHhhhhHHH-HHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcC
Confidence 455666777788888777 99999999999999999999999999864 233578889999999999999999999
Q ss_pred CCCCCCCceeccCCceecceeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 77 PVAPLQLPHQSMEDCTVSGYHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 77 ~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
|+++.. +|.+.+|+.++||.||||+.|.++.|++||||++|+||
T Consensus 358 P~~~~~-~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP 401 (490)
T PLN02500 358 NVVRFL-HRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQP 401 (490)
T ss_pred CCccCe-eeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCc
Confidence 999986 79999999999999999999999999999999999987
No 7
>PLN02183 ferulate 5-hydroxylase
Probab=99.98 E-value=8.1e-32 Score=191.10 Aligned_cols=118 Identities=31% Similarity=0.545 Sum_probs=108.3
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCcccCCCCHHHHHHHHHHhccCCCCCC
Q 048154 2 DVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGAKRQVNESDIKNLVYLRAILMETMHLYPVAPL 81 (121)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~l~~l~~~~~E~~r~~~~~~~ 81 (121)
++...++.+++||.+||+ ++++|++++|++||++|+|+++|++++++..+.++.+++.++||+++|++|++|++|+++.
T Consensus 304 ~i~~~~~~~~~AG~dTTa-~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~ 382 (516)
T PLN02183 304 NIKAIIMDVMFGGTETVA-SAIEWAMAELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPL 382 (516)
T ss_pred HHHHHHHHHHHcchhhHH-HHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccc
Confidence 345566667788888777 9999999999999999999999999999866678889999999999999999999999999
Q ss_pred CCceeccCCceecceeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 82 QLPHQSMEDCTVSGYHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 82 ~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
. .|.+.+|+.++|+.||||+.|.++.|++||||++|+||
T Consensus 383 ~-~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP 421 (516)
T PLN02183 383 L-LHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDP 421 (516)
T ss_pred e-eeeccCceeECCEEECCCCEEEEehhhhcCCccccCCc
Confidence 7 69999999999999999999999999999999999997
No 8
>PLN03234 cytochrome P450 83B1; Provisional
Probab=99.97 E-value=1.1e-31 Score=189.61 Aligned_cols=119 Identities=33% Similarity=0.534 Sum_probs=108.8
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCcccCCCCHHHHHHHHHHhccCCCCCC
Q 048154 2 DVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGAKRQVNESDIKNLVYLRAILMETMHLYPVAPL 81 (121)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~l~~l~~~~~E~~r~~~~~~~ 81 (121)
++..+++.+++||.+||+ ++++|++++|++||++|+++++|+++++++...++.+++.++||+++|++|++|++|+++.
T Consensus 288 ~i~~~~~~ll~AG~dTTa-~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~ 366 (499)
T PLN03234 288 NVKAMILDIVVPGTDTAA-AVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPI 366 (499)
T ss_pred HHHHHHHHHHhcchhhHH-HHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccc
Confidence 345566667778888777 9999999999999999999999999999877778889999999999999999999999998
Q ss_pred CCceeccCCceecceeeCCCCEEeecchhhhcCCCCC-CCC
Q 048154 82 QLPHQSMEDCTVSGYHVCAGTQHFVNALKVHHDPKVW-QEP 121 (121)
Q Consensus 82 ~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~P 121 (121)
.++|.+.+|+.++|+.||+|+.|.++.+++||||++| +||
T Consensus 367 ~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P 407 (499)
T PLN03234 367 LLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNP 407 (499)
T ss_pred cCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCCh
Confidence 7679999999999999999999999999999999999 787
No 9
>PLN00168 Cytochrome P450; Provisional
Probab=99.97 E-value=1.6e-31 Score=189.75 Aligned_cols=119 Identities=24% Similarity=0.481 Sum_probs=109.7
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCC-CCCCcccCCCCHHHHHHHHHHhccCCCCC
Q 048154 2 DVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGAK-RQVNESDIKNLVYLRAILMETMHLYPVAP 80 (121)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~~-~~~~~~~~~~l~~l~~~~~E~~r~~~~~~ 80 (121)
+++.+++.++++|.+||+ ++++|++++|++||++|+++++|+++++++. ..++.+++.++||+++|++|++|++|+++
T Consensus 306 ~i~~~~~~l~~AG~dTTa-~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~ 384 (519)
T PLN00168 306 EIVNLCSEFLNAGTDTTS-TALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAH 384 (519)
T ss_pred HHHHHHHHHHHhcchHHH-HHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCc
Confidence 456677778888888777 9999999999999999999999999998753 56788899999999999999999999998
Q ss_pred CCCceeccCCceecceeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 81 LQLPHQSMEDCTVSGYHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 81 ~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
..++|.+.+|+.++|+.||+|+.|.++.+++||||++|+||
T Consensus 385 ~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p 425 (519)
T PLN00168 385 FVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERP 425 (519)
T ss_pred ccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCc
Confidence 87789999999999999999999999999999999999987
No 10
>PLN02290 cytokinin trans-hydroxylase
Probab=99.97 E-value=1.9e-31 Score=189.13 Aligned_cols=116 Identities=23% Similarity=0.444 Sum_probs=106.6
Q ss_pred hHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCcccCCCCHHHHHHHHHHhccCCCCCCC
Q 048154 3 VIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGAKRQVNESDIKNLVYLRAILMETMHLYPVAPLQ 82 (121)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~l~~l~~~~~E~~r~~~~~~~~ 82 (121)
++.+++.++++|.+||+ ++++|++++|++||++|+++++|+++++++. .++.+++.++||+++|++|++|++|+++..
T Consensus 317 i~~~~~~~~~AG~dTta-~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~ 394 (516)
T PLN02290 317 IMDECKTFFFAGHETTA-LLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLL 394 (516)
T ss_pred HHHHHHHHHhhhHHHHH-HHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCcccc
Confidence 45566677788888777 9999999999999999999999999999874 778899999999999999999999999864
Q ss_pred CceeccCCceecceeeCCCCEEeecchhhhcCCCCC-CCC
Q 048154 83 LPHQSMEDCTVSGYHVCAGTQHFVNALKVHHDPKVW-QEP 121 (121)
Q Consensus 83 ~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~P 121 (121)
+|.+.+|+.++|+.||+|+.|.++.|++||||++| +||
T Consensus 395 -~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP 433 (516)
T PLN02290 395 -PRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDA 433 (516)
T ss_pred -ceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCCCh
Confidence 89999999999999999999999999999999999 787
No 11
>PLN02966 cytochrome P450 83A1
Probab=99.97 E-value=3.6e-31 Score=187.29 Aligned_cols=119 Identities=34% Similarity=0.518 Sum_probs=107.6
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCC--CCCCcccCCCCHHHHHHHHHHhccCCCC
Q 048154 2 DVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGAK--RQVNESDIKNLVYLRAILMETMHLYPVA 79 (121)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~~--~~~~~~~~~~l~~l~~~~~E~~r~~~~~ 79 (121)
++...++.+++||.+||+ ++++|++++|++||++|+++++|++++++.. ..++.+++.++||++++++|++|++|++
T Consensus 289 ~i~~~~~~l~~AG~eTta-~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v 367 (502)
T PLN02966 289 NVKAVILDIVVAGTDTAA-AAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVI 367 (502)
T ss_pred HHHHHHHHHHhccccchH-HHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCc
Confidence 345566667788888777 9999999999999999999999999998753 3478889999999999999999999999
Q ss_pred CCCCceeccCCceecceeeCCCCEEeecchhhhcCCCCC-CCC
Q 048154 80 PLQLPHQSMEDCTVSGYHVCAGTQHFVNALKVHHDPKVW-QEP 121 (121)
Q Consensus 80 ~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~P 121 (121)
+..++|.+.+|+.++|+.||+|+.|.++.|++||||++| +||
T Consensus 368 ~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP 410 (502)
T PLN02966 368 PLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNP 410 (502)
T ss_pred ccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCCh
Confidence 986689999999999999999999999999999999999 887
No 12
>PLN03112 cytochrome P450 family protein; Provisional
Probab=99.97 E-value=3e-31 Score=188.04 Aligned_cols=119 Identities=29% Similarity=0.534 Sum_probs=109.3
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCcccCCCCHHHHHHHHHHhccCCCCCC
Q 048154 2 DVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGAKRQVNESDIKNLVYLRAILMETMHLYPVAPL 81 (121)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~l~~l~~~~~E~~r~~~~~~~ 81 (121)
+++..++.++++|.+||+ ++++|++++|++||++|+++++|+++++++.+.++.+++.++||++++++|++|++|+++.
T Consensus 296 ~i~~~~~~~~~AG~dTTa-~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~ 374 (514)
T PLN03112 296 EIKALMQDMIAAATDTSA-VTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPF 374 (514)
T ss_pred HHHHHHHHHhccccccHH-HHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCccc
Confidence 345566667778888776 9999999999999999999999999999877778899999999999999999999999998
Q ss_pred CCceeccCCceecceeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 82 QLPHQSMEDCTVSGYHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 82 ~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
.++|.+.+|+.++|+.||+|+.|.++.+++||||++|+||
T Consensus 375 ~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP 414 (514)
T PLN03112 375 LIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDV 414 (514)
T ss_pred ccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCCh
Confidence 6689999999999999999999999999999999999987
No 13
>PLN03018 homomethionine N-hydroxylase
Probab=99.97 E-value=6e-31 Score=187.24 Aligned_cols=119 Identities=32% Similarity=0.523 Sum_probs=109.6
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCcccCCCCHHHHHHHHHHhccCCCCCC
Q 048154 2 DVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGAKRQVNESDIKNLVYLRAILMETMHLYPVAPL 81 (121)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~l~~l~~~~~E~~r~~~~~~~ 81 (121)
+++..++.++++|.++|+ ++++|++++|++||++|+++++|++++++....++.+++.++||++++++|++|++|+++.
T Consensus 314 ~i~~~~~~~~~aG~dTta-~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~ 392 (534)
T PLN03018 314 EIKAQCVEFCIAAIDNPA-NNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHY 392 (534)
T ss_pred HHHHHHHHHHHHhhhHHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccc
Confidence 455666777788888777 9999999999999999999999999999877778888999999999999999999999998
Q ss_pred CCceeccCCceecceeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 82 QLPHQSMEDCTVSGYHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 82 ~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
..+|.+.+|+.++|+.||+|+.|.++.|++||||++|+||
T Consensus 393 ~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p 432 (534)
T PLN03018 393 VPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDP 432 (534)
T ss_pred cCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCc
Confidence 7679999999999999999999999999999999999987
No 14
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=99.97 E-value=4e-31 Score=187.13 Aligned_cols=119 Identities=30% Similarity=0.559 Sum_probs=109.6
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCcccCCCCHHHHHHHHHHhccCCCCCC
Q 048154 2 DVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGAKRQVNESDIKNLVYLRAILMETMHLYPVAPL 81 (121)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~l~~l~~~~~E~~r~~~~~~~ 81 (121)
+++..++.++++|.+||+ ++++|++++|++||++|+++++|+++++++...++.+++.++||+++|++|++|++|+++.
T Consensus 289 ~i~~~~~~~~~Ag~dTta-~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~ 367 (504)
T PLN00110 289 NIKALLLNLFTAGTDTSS-SVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPL 367 (504)
T ss_pred HHHHHHHhhhcccccchH-HHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCccc
Confidence 355566677788888777 9999999999999999999999999999877778889999999999999999999999998
Q ss_pred CCceeccCCceecceeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 82 QLPHQSMEDCTVSGYHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 82 ~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
.++|.+.+|+.++|+.||+|+.|.++.+++||||++|+||
T Consensus 368 ~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP 407 (504)
T PLN00110 368 NLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENP 407 (504)
T ss_pred ccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCc
Confidence 6689999999999999999999999999999999999997
No 15
>PLN02655 ent-kaurene oxidase
Probab=99.97 E-value=6.2e-31 Score=184.66 Aligned_cols=118 Identities=30% Similarity=0.437 Sum_probs=108.6
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCcccCCCCHHHHHHHHHHhccCCCCCC
Q 048154 2 DVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGAKRQVNESDIKNLVYLRAILMETMHLYPVAPL 81 (121)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~l~~l~~~~~E~~r~~~~~~~ 81 (121)
+++..++.++++|.+||+ ++++|++++|++||++|+++++|++.++++.. ++.+.+.++||++++++|++|++|+++.
T Consensus 262 ~i~~~~~~~~~ag~dtta-~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~ 339 (466)
T PLN02655 262 QLMMLVWEPIIEAADTTL-VTTEWAMYELAKNPDKQERLYREIREVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPL 339 (466)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCC
Confidence 455666777788888777 99999999999999999999999999998744 8889999999999999999999999998
Q ss_pred CCceeccCCceecceeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 82 QLPHQSMEDCTVSGYHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 82 ~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
..+|.+.+|+.++|+.||+|+.|.++.+++||||++|+||
T Consensus 340 ~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p 379 (466)
T PLN02655 340 LPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENP 379 (466)
T ss_pred CCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCCh
Confidence 7789999999999999999999999999999999999987
No 16
>PLN02738 carotene beta-ring hydroxylase
Probab=99.97 E-value=4.7e-31 Score=190.44 Aligned_cols=117 Identities=24% Similarity=0.460 Sum_probs=107.0
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCcccCCCCHHHHHHHHHHhccCCCCCC
Q 048154 2 DVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGAKRQVNESDIKNLVYLRAILMETMHLYPVAPL 81 (121)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~l~~l~~~~~E~~r~~~~~~~ 81 (121)
++..+++.++++|.+||+ ++++|++++|++||++|+|+++|+++++++ ..++.+++.+|||+++||+|++|++|+++.
T Consensus 391 ~L~~e~~~ll~AG~eTTA-~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~kLPYL~AVIkEtLRL~p~~p~ 468 (633)
T PLN02738 391 QLRDDLMTMLIAGHETSA-AVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKLKYTTRVINESLRLYPQPPV 468 (633)
T ss_pred HHHHHHHHHHhcCCccHH-HHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHccCHHHHHHHHHHHhcCCCccc
Confidence 455666777778888777 999999999999999999999999999874 567889999999999999999999999998
Q ss_pred CCceeccCCceecceeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 82 QLPHQSMEDCTVSGYHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 82 ~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
. .|.+.+|..++||.||+|+.|.++.|.+||||++|+||
T Consensus 469 ~-~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP 507 (633)
T PLN02738 469 L-IRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDA 507 (633)
T ss_pred c-ceeeccCceECCEEECCCCEEEecHHHHhCCccccCCc
Confidence 6 68889999999999999999999999999999999998
No 17
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=99.97 E-value=3e-31 Score=183.55 Aligned_cols=119 Identities=28% Similarity=0.538 Sum_probs=109.1
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCcccCCCCHHHHHHHHHHhccCCCCCC
Q 048154 2 DVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGAKRQVNESDIKNLVYLRAILMETMHLYPVAPL 81 (121)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~l~~l~~~~~E~~r~~~~~~~ 81 (121)
++...++.++++|.+++. .+++|++++|++||++|+++++|++.+.++...++.+.+.++||+++|++|++|++|+++.
T Consensus 262 ~i~~~~~~~~~ag~dtt~-~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~ 340 (463)
T PF00067_consen 262 EIAAELLTLLFAGHDTTA-STLSWTLYELAKNPEVQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPF 340 (463)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSST
T ss_pred cccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 455566667777777776 9999999999999999999999999999777788889999999999999999999999996
Q ss_pred CCceeccCCceecceeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 82 QLPHQSMEDCTVSGYHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 82 ~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
.++|.+.+|++++|+.||+|+.|.++.+++|+||++|+||
T Consensus 341 ~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp 380 (463)
T PF00067_consen 341 SLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDP 380 (463)
T ss_dssp EEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSST
T ss_pred cccccccccccccccccccccccccccccccccccccccc
Confidence 6689999999999999999999999999999999999987
No 18
>PLN02687 flavonoid 3'-monooxygenase
Probab=99.97 E-value=7.7e-31 Score=186.15 Aligned_cols=119 Identities=35% Similarity=0.660 Sum_probs=109.2
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCcccCCCCHHHHHHHHHHhccCCCCCC
Q 048154 2 DVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGAKRQVNESDIKNLVYLRAILMETMHLYPVAPL 81 (121)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~l~~l~~~~~E~~r~~~~~~~ 81 (121)
++...++.++++|.+||+ ++++|++++|++||++|+++++|+++++++...++.+++.++||++++++|++|++|+++.
T Consensus 297 ~i~~~~~~~~~AG~eTta-~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~ 375 (517)
T PLN02687 297 EIKALLLNLFTAGTDTTS-STVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPL 375 (517)
T ss_pred HHHHHHHHHhccccCchH-HHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccc
Confidence 345566667778888777 9999999999999999999999999998877778889999999999999999999999998
Q ss_pred CCceeccCCceecceeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 82 QLPHQSMEDCTVSGYHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 82 ~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
.++|.+.+|+.++|+.||+|+.|.++.|++||||++|+||
T Consensus 376 ~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp 415 (517)
T PLN02687 376 SLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDP 415 (517)
T ss_pred cccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCc
Confidence 6689999999999999999999999999999999999987
No 19
>PLN02774 brassinosteroid-6-oxidase
Probab=99.97 E-value=1.7e-30 Score=182.39 Aligned_cols=118 Identities=19% Similarity=0.334 Sum_probs=106.1
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcC---CCCCCcccCCCCHHHHHHHHHHhccCCC
Q 048154 2 DVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGA---KRQVNESDIKNLVYLRAILMETMHLYPV 78 (121)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~---~~~~~~~~~~~l~~l~~~~~E~~r~~~~ 78 (121)
|+...++.++++|.+||+ ++++|+++.|++||++|+++++|++++.+. ...++.+++.++||++++++|++|++|+
T Consensus 264 ei~~~~~~ll~Ag~dTt~-~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~ 342 (463)
T PLN02774 264 EIIDQIITILYSGYETVS-TTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATI 342 (463)
T ss_pred HHHHHHHHHHHhcchhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCC
Confidence 455566667778887766 999999999999999999999999999864 3457888999999999999999999999
Q ss_pred CCCCCceeccCCceecceeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 79 APLQLPHQSMEDCTVSGYHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 79 ~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
++.. .|.+.+|++++|+.||||+.|+++.+++||||++|+||
T Consensus 343 v~~~-~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP 384 (463)
T PLN02774 343 VNGV-LRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDP 384 (463)
T ss_pred CCCc-ccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCCh
Confidence 9866 79999999999999999999999999999999999987
No 20
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=99.97 E-value=2.1e-30 Score=183.34 Aligned_cols=112 Identities=21% Similarity=0.369 Sum_probs=98.7
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCcccCCCCHHHHHHHHHHhccCCCCCC
Q 048154 2 DVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGAKRQVNESDIKNLVYLRAILMETMHLYPVAPL 81 (121)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~l~~l~~~~~E~~r~~~~~~~ 81 (121)
++..+++.++++|.+||+ ++++|++++|++||++|+|+++|+++++ +.+++.+|||++++++|++|++|+++.
T Consensus 301 ~i~~~~~~~l~AG~dTTa-~tl~w~l~~La~~Pevq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~ 373 (500)
T PLN02169 301 FIRDVIFSLVLAGRDTTS-SALTWFFWLLSKHPQVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPF 373 (500)
T ss_pred HHHHHHHHHHHhchhHHH-HHHHHHHHHHHCCHHHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCc
Confidence 356677777888888877 9999999999999999999999998764 567899999999999999999999998
Q ss_pred CCceeccCC-ceecceeeCCCCEEeecchhhhcCCCCC-CCC
Q 048154 82 QLPHQSMED-CTVSGYHVCAGTQHFVNALKVHHDPKVW-QEP 121 (121)
Q Consensus 82 ~~~r~~~~~-~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~P 121 (121)
. .|.+.+| +.++|+.||+|+.|.++.|++||||++| +||
T Consensus 374 ~-~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP 414 (500)
T PLN02169 374 N-HKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDA 414 (500)
T ss_pred C-ceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCCh
Confidence 8 4655555 5559999999999999999999999999 787
No 21
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=99.97 E-value=3.8e-30 Score=182.07 Aligned_cols=118 Identities=19% Similarity=0.333 Sum_probs=105.9
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCC-CCCCcccCCCCHHHHHHHHHHhccCCCCC
Q 048154 2 DVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGAK-RQVNESDIKNLVYLRAILMETMHLYPVAP 80 (121)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~~-~~~~~~~~~~l~~l~~~~~E~~r~~~~~~ 80 (121)
++..+++.++++|.+||+ ++++|++++|++||++|+++++|++++.+.. ..++.+++.+|||+++|++|++|++|+++
T Consensus 293 ~l~~~~~~~l~AG~dTta-~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~ 371 (502)
T PLN02426 293 YLRDIVVSFLLAGRDTVA-SALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQ 371 (502)
T ss_pred HHHHHHHHHHHhccchHH-HHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCC
Confidence 355666777888888877 9999999999999999999999999988753 36788999999999999999999999999
Q ss_pred CCCceeccCCcee-cceeeCCCCEEeecchhhhcCCCCC-CCC
Q 048154 81 LQLPHQSMEDCTV-SGYHVCAGTQHFVNALKVHHDPKVW-QEP 121 (121)
Q Consensus 81 ~~~~r~~~~~~~~-~g~~ip~g~~v~~~~~~~~~d~~~~-~~P 121 (121)
.. .|.+.+|..+ +|+.||+|+.|.++.+++||||++| +||
T Consensus 372 ~~-~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp 413 (502)
T PLN02426 372 FD-SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDC 413 (502)
T ss_pred Cc-ceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcCh
Confidence 87 5888888776 8999999999999999999999999 776
No 22
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=99.97 E-value=3.3e-30 Score=182.88 Aligned_cols=118 Identities=20% Similarity=0.320 Sum_probs=102.5
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcC--------------------CCCCCcccCCC
Q 048154 2 DVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGA--------------------KRQVNESDIKN 61 (121)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~--------------------~~~~~~~~~~~ 61 (121)
++..+++.+++||.+||+ ++++|++++|++||++|+++++|+++++++ ...++.+++.+
T Consensus 292 ~i~~~~~~ll~AG~dTTa-~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (516)
T PLN03195 292 SLRDIVLNFVIAGRDTTA-TTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGK 370 (516)
T ss_pred HHHHHHHHHHHHhhHhHH-HHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhc
Confidence 456677777888888877 999999999999999999999999988643 23467788999
Q ss_pred CHHHHHHHHHHhccCCCCCCCCceeccCCce-ecceeeCCCCEEeecchhhhcCCCCC-CCC
Q 048154 62 LVYLRAILMETMHLYPVAPLQLPHQSMEDCT-VSGYHVCAGTQHFVNALKVHHDPKVW-QEP 121 (121)
Q Consensus 62 l~~l~~~~~E~~r~~~~~~~~~~r~~~~~~~-~~g~~ip~g~~v~~~~~~~~~d~~~~-~~P 121 (121)
+||+++|++|++|++|+++.. .|.+.+|.. ++|+.||+|+.|.++.|++||||++| +||
T Consensus 371 Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP 431 (516)
T PLN03195 371 LQYLHAVITETLRLYPAVPQD-PKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDA 431 (516)
T ss_pred CHHHHHHHHHHhhcCCCCcch-hhhhccCcCcCCCcEECCCCEEEEehHhhccChhhhccCh
Confidence 999999999999999999988 565666554 48999999999999999999999999 887
No 23
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=99.97 E-value=7.7e-30 Score=178.55 Aligned_cols=118 Identities=16% Similarity=0.186 Sum_probs=104.9
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhc----CCCCCCcccCCCCHHHHHHHHHHhccCC
Q 048154 2 DVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVG----AKRQVNESDIKNLVYLRAILMETMHLYP 77 (121)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~----~~~~~~~~~~~~l~~l~~~~~E~~r~~~ 77 (121)
+++..++.++++|.++|+ ++++|++++|++||++|+++++|++++.+ ....++.+++.++||+++|++|++|++|
T Consensus 251 ~i~~~~~~ll~Ag~dTts-~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p 329 (452)
T PLN03141 251 LISDNMIDMMIPGEDSVP-VLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGN 329 (452)
T ss_pred HHHHHHHHHHHhcchhHH-HHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccC
Confidence 455566677788888777 99999999999999999999999988763 2344677888999999999999999999
Q ss_pred CCCCCCceeccCCceecceeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 78 VAPLQLPHQSMEDCTVSGYHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 78 ~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
+++.. +|.+.+|+.++||.||+|+.|.++.+++||||++|+||
T Consensus 330 ~~~~~-~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP 372 (452)
T PLN03141 330 IINGV-MRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNP 372 (452)
T ss_pred CcCCc-ceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCc
Confidence 98755 89999999999999999999999999999999999987
No 24
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.96 E-value=5.1e-30 Score=177.33 Aligned_cols=116 Identities=22% Similarity=0.356 Sum_probs=106.6
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcC-CCCCCcccCCCCHHHHHHHHHHhccCCCCCCC
Q 048154 4 IQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGA-KRQVNESDIKNLVYLRAILMETMHLYPVAPLQ 82 (121)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~-~~~~~~~~~~~l~~l~~~~~E~~r~~~~~~~~ 82 (121)
....+-++++|.+||+ +++.|++|.|++||++|++|++|+.+++.+ ...++.+.+.++||++|||+|++|+||.+++.
T Consensus 318 ~~~~~dll~aGvDTTs-~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~ 396 (519)
T KOG0159|consen 318 KANVMDLLAAGVDTTS-NTLLWALYELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGN 396 (519)
T ss_pred HHHHHHHHHHhccchH-HHHHHHHHHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceecccccc
Confidence 3444556677777777 999999999999999999999999999987 57788899999999999999999999999998
Q ss_pred CceeccCCceecceeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 83 LPHQSMEDCTVSGYHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 83 ~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
.|...+|.++.||.|||||.|.++.+...+||++|++|
T Consensus 397 -~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p 434 (519)
T KOG0159|consen 397 -GRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDP 434 (519)
T ss_pred -ccccchhceeccceecCCCeEEEeehhhccChhhCCCc
Confidence 79999999999999999999999999999999999987
No 25
>PLN02936 epsilon-ring hydroxylase
Probab=99.96 E-value=1e-29 Score=179.45 Aligned_cols=118 Identities=31% Similarity=0.521 Sum_probs=106.1
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCcccCCCCHHHHHHHHHHhccCCCCCC
Q 048154 2 DVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGAKRQVNESDIKNLVYLRAILMETMHLYPVAPL 81 (121)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~l~~l~~~~~E~~r~~~~~~~ 81 (121)
++..+++.++++|.+||+ ++++|++++|++||++|+++++|+++++++ ..++.+.+.+|||+++|++|++|++|+++.
T Consensus 278 ~i~~~~~~~~~aG~dTta-~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~ 355 (489)
T PLN02936 278 QLRDDLLSMLVAGHETTG-SVLTWTLYLLSKNPEALRKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPV 355 (489)
T ss_pred HHHHHHHHHHHHhHHHHH-HHHHHHHHHHhcCHHHHHHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCccc
Confidence 455666777788888777 999999999999999999999999999875 446788899999999999999999999988
Q ss_pred CCceeccCCceecceeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 82 QLPHQSMEDCTVSGYHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 82 ~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
..+|.+.+|+.++|+.||+|+.|.++.+++||||++|+||
T Consensus 356 ~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP 395 (489)
T PLN02936 356 LIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERA 395 (489)
T ss_pred ccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCc
Confidence 8777777888889999999999999999999999999987
No 26
>PLN02196 abscisic acid 8'-hydroxylase
Probab=99.96 E-value=2.1e-29 Score=176.85 Aligned_cols=118 Identities=15% Similarity=0.275 Sum_probs=106.3
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcC---CCCCCcccCCCCHHHHHHHHHHhccCCC
Q 048154 2 DVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGA---KRQVNESDIKNLVYLRAILMETMHLYPV 78 (121)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~---~~~~~~~~~~~l~~l~~~~~E~~r~~~~ 78 (121)
++...++.+++||.++|+ ++++|++++|++||++|+++++|++++.+. ...++.+++.++||++++++|++|++|+
T Consensus 264 ei~~~~~~~~~Ag~dTta-~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~ 342 (463)
T PLN02196 264 QIADNIIGVIFAARDTTA-SVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASI 342 (463)
T ss_pred HHHHHHHHHHHhhhHHHH-HHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCC
Confidence 455666777778887766 999999999999999999999999998864 3457788899999999999999999999
Q ss_pred CCCCCceeccCCceecceeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 79 APLQLPHQSMEDCTVSGYHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 79 ~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
+++. .|.+.+|+.++|+.||+|+.|.++.+++||||++|+||
T Consensus 343 ~~~~-~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP 384 (463)
T PLN02196 343 LSFT-FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDP 384 (463)
T ss_pred cccc-ceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCc
Confidence 9987 59999999999999999999999999999999999987
No 27
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=99.96 E-value=2.8e-29 Score=177.44 Aligned_cols=118 Identities=24% Similarity=0.523 Sum_probs=102.7
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCC-CCcccCCCCHHHHHHHHHHhccCCCCC
Q 048154 2 DVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGAKRQ-VNESDIKNLVYLRAILMETMHLYPVAP 80 (121)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~-~~~~~~~~l~~l~~~~~E~~r~~~~~~ 80 (121)
++..+..+++++|.+||+ .+++|++++|+.||++|+++++|+++++++... .......+|+|+++|++|++|++|+++
T Consensus 291 ~i~d~v~tf~faG~DTTs-s~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp 369 (497)
T KOG0157|consen 291 DIRDEVDTFMFAGHDTTS-SALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVP 369 (497)
T ss_pred HHHHHHHHheeeccchHH-HHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCc
Confidence 455566777788888777 999999999999999999999999999985433 233333369999999999999999999
Q ss_pred CCCceeccCCcee-cceeeCCCCEEeecchhhhcCCCCCC-CC
Q 048154 81 LQLPHQSMEDCTV-SGYHVCAGTQHFVNALKVHHDPKVWQ-EP 121 (121)
Q Consensus 81 ~~~~r~~~~~~~~-~g~~ip~g~~v~~~~~~~~~d~~~~~-~P 121 (121)
.. .|.+.+|+.+ +|+.||+|+.|.++.+++|||+.+|+ ||
T Consensus 370 ~~-~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp 411 (497)
T KOG0157|consen 370 LV-ARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDP 411 (497)
T ss_pred hh-hcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCCh
Confidence 98 7999999999 48999999999999999999999997 76
No 28
>PLN02302 ent-kaurenoic acid oxidase
Probab=99.96 E-value=5.5e-29 Score=175.47 Aligned_cols=118 Identities=22% Similarity=0.394 Sum_probs=105.4
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCC----CCCCcccCCCCHHHHHHHHHHhccCC
Q 048154 2 DVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGAK----RQVNESDIKNLVYLRAILMETMHLYP 77 (121)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~~----~~~~~~~~~~l~~l~~~~~E~~r~~~ 77 (121)
+++..++.++++|.++|+ ++++|+++.|++||++|+++++|++++.+.. ..++.+++.++||++++++|++|++|
T Consensus 287 ~i~~~~~~~~~Ag~dtta-~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p 365 (490)
T PLN02302 287 EIIDLLLMYLNAGHESSG-HLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLIN 365 (490)
T ss_pred HHHHHHHHHHHhhHHHHH-HHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCC
Confidence 345566667778888777 9999999999999999999999999988642 12678889999999999999999999
Q ss_pred CCCCCCceeccCCceecceeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 78 VAPLQLPHQSMEDCTVSGYHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 78 ~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
+++.. .|.+.+|+.++|+.||+|+.|.++.+++||||++|+||
T Consensus 366 ~~~~~-~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP 408 (490)
T PLN02302 366 ISLTV-FREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNP 408 (490)
T ss_pred Ccccc-hhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCc
Confidence 99886 79999999999999999999999999999999999987
No 29
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=99.96 E-value=4.3e-28 Score=170.59 Aligned_cols=118 Identities=18% Similarity=0.304 Sum_probs=104.9
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcC---CCCCCcccCCCCHHHHHHHHHHhccCCC
Q 048154 2 DVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGA---KRQVNESDIKNLVYLRAILMETMHLYPV 78 (121)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~---~~~~~~~~~~~l~~l~~~~~E~~r~~~~ 78 (121)
|++..++.++++|.++|+ .+++|+++.|++||++|+++++|++++.+. ...++.+++.++||++++++|++|++|+
T Consensus 267 ei~~~~~~l~~Ag~~tta-~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~ 345 (472)
T PLN02987 267 EIVDFLVALLVAGYETTS-TIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANI 345 (472)
T ss_pred HHHHHHHHHHHhccchHH-HHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCC
Confidence 455566667788887776 999999999999999999999999998752 3456778889999999999999999999
Q ss_pred CCCCCceeccCCceecceeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 79 APLQLPHQSMEDCTVSGYHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 79 ~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
++.. +|.+.+|+.++|+.||+|+.|.++.+++||||++|+||
T Consensus 346 ~~~~-~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p 387 (472)
T PLN02987 346 IGGI-FRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDA 387 (472)
T ss_pred cCCc-cccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCc
Confidence 8865 79999999999999999999999999999999999987
No 30
>PLN02648 allene oxide synthase
Probab=99.94 E-value=5.7e-26 Score=159.93 Aligned_cols=101 Identities=19% Similarity=0.321 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHhhCHH-HHHHHHHHHHHHhcC-CCCCCcccCCCCHHHHHHHHHHhccCCCCCCCCceeccCCceec---
Q 048154 20 TRLTNFLISLLLNNRD-ALKKAQDELDIHVGA-KRQVNESDIKNLVYLRAILMETMHLYPVAPLQLPHQSMEDCTVS--- 94 (121)
Q Consensus 20 ~~~~~~~~~~l~~~p~-~~~~l~~ei~~~~~~-~~~~~~~~~~~l~~l~~~~~E~~r~~~~~~~~~~r~~~~~~~~~--- 94 (121)
+++++|++++|++||+ +++++++|++.+++. ...++.+++.++||++++++|++|++|+++.. .|.+.+|+.+.
T Consensus 289 ~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~-~r~a~~d~~l~~~~ 367 (480)
T PLN02648 289 KIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQ-YGRAREDFVIESHD 367 (480)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccc-cceecCCEEEecCC
Confidence 3789999999999995 999999999999863 34678888999999999999999999999987 57789999996
Q ss_pred -ceeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 95 -GYHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 95 -g~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
||.||+|+.|.++.+.+||||++|+||
T Consensus 368 ~g~~IpkG~~V~~~~~~~hrdp~~~~dP 395 (480)
T PLN02648 368 AAFEIKKGEMLFGYQPLVTRDPKVFDRP 395 (480)
T ss_pred ceEEECCCCEEEEChHHHhCCcccCCCc
Confidence 799999999999999999999999987
No 31
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.93 E-value=6.4e-26 Score=157.31 Aligned_cols=103 Identities=28% Similarity=0.434 Sum_probs=95.4
Q ss_pred ChhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCcccCCCCHHHHHHHHHHhccCCCCC
Q 048154 1 MDVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGAKRQVNESDIKNLVYLRAILMETMHLYPVAP 80 (121)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~~~~~~~~~l~~l~~~~~E~~r~~~~~~ 80 (121)
+|++..+++++++|.+||. ++++|+++.|++||++++++++|.+. +|+.++++|++|++|+++
T Consensus 235 ~Ei~~~~~~ll~AGheTTa-~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv~ 297 (411)
T COG2124 235 DEIRDELITLLVAGHETTA-NALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVP 297 (411)
T ss_pred HHHHHHHHHHHHhhhHHHH-HHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCchh
Confidence 3677777888888888888 99999999999999999999998764 789999999999999999
Q ss_pred CCCceeccCCceecceeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 81 LQLPHQSMEDCTVSGYHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 81 ~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
. ..|.+.+|++++|+.||+|+.|.++.+++||||++|++|
T Consensus 298 ~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P 337 (411)
T COG2124 298 L-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDP 337 (411)
T ss_pred c-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCCh
Confidence 9 589999999999999999999999999999999999987
No 32
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.93 E-value=1.4e-25 Score=153.01 Aligned_cols=120 Identities=23% Similarity=0.350 Sum_probs=109.0
Q ss_pred ChhHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCC-CCcccCCCCHHHHHHHHHHhccCCCC
Q 048154 1 MDVIQFHIIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHVGAKRQ-VNESDIKNLVYLRAILMETMHLYPVA 79 (121)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~~~~~~-~~~~~~~~l~~l~~~~~E~~r~~~~~ 79 (121)
|++++..++..++|+..|++.+..|++++|++||++++.+++|+.+++|.... ++.+.++++|.+++||+|++|++||.
T Consensus 271 e~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~ 350 (486)
T KOG0684|consen 271 EEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPA 350 (486)
T ss_pred HHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCch
Confidence 45677777777777777777999999999999999999999999999987655 89999999999999999999999988
Q ss_pred CCCCceeccCCceecc----eeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 80 PLQLPHQSMEDCTVSG----YHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 80 ~~~~~r~~~~~~~~~g----~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
+.. -|.+.+|.++.+ |.||+|..|.++.+.+|+||++|+||
T Consensus 351 ~~~-~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp 395 (486)
T KOG0684|consen 351 HSL-MRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDP 395 (486)
T ss_pred hhH-HHhhccceeeccCCcceecCCCCEEEeccccccCCccccCCh
Confidence 877 599999998866 99999999999999999999999997
No 33
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=79.10 E-value=7.9 Score=21.66 Aligned_cols=36 Identities=14% Similarity=0.068 Sum_probs=28.4
Q ss_pred HHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHHh
Q 048154 11 VFVDLERFHTRLTNFLISLLLNNRDALKKAQDELDIHV 48 (121)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ei~~~~ 48 (121)
+.+|...- ..++|.+...-..|+..+.+.+||+++-
T Consensus 46 v~fG~Ysl--~~lgy~v~tFnDcpeA~~eL~~eI~eAK 81 (91)
T PF08285_consen 46 VSFGCYSL--FTLGYGVATFNDCPEAAKELQKEIKEAK 81 (91)
T ss_pred HHHHHHHH--HHHHHhhhccCCCHHHHHHHHHHHHHHH
Confidence 44555543 5788888888889999999999999874
No 34
>PF12508 DUF3714: Protein of unknown function (DUF3714) ; InterPro: IPR022187 Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=78.02 E-value=2.4 Score=27.31 Aligned_cols=43 Identities=19% Similarity=0.201 Sum_probs=31.7
Q ss_pred CHHHHHHHHHHhccCCCCCCCCceeccCCceecceeeCCCCEEee
Q 048154 62 LVYLRAILMETMHLYPVAPLQLPHQSMEDCTVSGYHVCAGTQHFV 106 (121)
Q Consensus 62 l~~l~~~~~E~~r~~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~ 106 (121)
-....||++|.+........ .-+..+|+.++|..||+|+.++.
T Consensus 52 ~n~I~A~V~~~qtv~~Gs~v--rlRLle~i~i~g~~IPkgt~l~G 94 (200)
T PF12508_consen 52 KNTIRAVVDGTQTVVDGSRV--RLRLLEDIQIGGILIPKGTYLYG 94 (200)
T ss_pred CCeEEEEEecceEEeCCCEE--EEEEcCceEECCEEeCCCCEEEE
Confidence 34567888888776553333 23567889999999999998876
No 35
>PF05952 ComX: Bacillus competence pheromone ComX; InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible. DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=71.75 E-value=5.6 Score=20.18 Aligned_cols=18 Identities=22% Similarity=0.492 Sum_probs=15.6
Q ss_pred HHHHHHhhCHHHHHHHHH
Q 048154 25 FLISLLLNNRDALKKAQD 42 (121)
Q Consensus 25 ~~~~~l~~~p~~~~~l~~ 42 (121)
-.+.+|.+||++.+++.+
T Consensus 4 ~iV~YLv~nPevl~kl~~ 21 (57)
T PF05952_consen 4 EIVNYLVQNPEVLEKLKE 21 (57)
T ss_pred HHHHHHHHChHHHHHHHc
Confidence 467899999999999986
No 36
>PRK06789 flagellar motor switch protein; Validated
Probab=68.85 E-value=6.7 Score=21.04 Aligned_cols=41 Identities=10% Similarity=0.121 Sum_probs=31.9
Q ss_pred HHHHHhccCCCCCCCCceeccCC--ceecceeeCCCCEEeecc
Q 048154 68 ILMETMHLYPVAPLQLPHQSMED--CTVSGYHVCAGTQHFVNA 108 (121)
Q Consensus 68 ~~~E~~r~~~~~~~~~~r~~~~~--~~~~g~~ip~g~~v~~~~ 108 (121)
-++|.+.+.+.+...+.+.+.++ +.++|..|.+|..|.++-
T Consensus 21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~~ 63 (74)
T PRK06789 21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKNG 63 (74)
T ss_pred EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEECC
Confidence 46788888887776667777776 455899999999888753
No 37
>PF14550 Peptidase_U35_2: Putative phage protease XkdF
Probab=49.06 E-value=13 Score=22.08 Aligned_cols=21 Identities=24% Similarity=0.192 Sum_probs=16.9
Q ss_pred eccCCceecceeeCCCCEEee
Q 048154 86 QSMEDCTVSGYHVCAGTQHFV 106 (121)
Q Consensus 86 ~~~~~~~~~g~~ip~g~~v~~ 106 (121)
.+.+|..++|..||+|+.+..
T Consensus 72 I~~~d~~~~g~~i~~GtWv~~ 92 (122)
T PF14550_consen 72 IAPEDMEIGGETIPKGTWVVG 92 (122)
T ss_pred ecCCCcccCCeeecceEEEEE
Confidence 455688889999999998853
No 38
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=48.91 E-value=17 Score=26.29 Aligned_cols=21 Identities=14% Similarity=0.140 Sum_probs=16.4
Q ss_pred ccCCceecceeeCCCCEEeec
Q 048154 87 SMEDCTVSGYHVCAGTQHFVN 107 (121)
Q Consensus 87 ~~~~~~~~g~~ip~g~~v~~~ 107 (121)
..+|+.++|..||+|+.++..
T Consensus 278 Lle~~~v~~~~ipkgt~l~g~ 298 (410)
T TIGR03779 278 LLEPIQAGDLVIPKGTVLYGT 298 (410)
T ss_pred EcCceeeCCEEecCCCEEEEE
Confidence 345667789999999988764
No 39
>PRK05933 type III secretion system protein; Validated
Probab=44.95 E-value=27 Score=24.52 Aligned_cols=44 Identities=20% Similarity=0.136 Sum_probs=33.2
Q ss_pred HHHHHHHHhccCCCCCCCCceec-cC--CceecceeeCCCCEEeecc
Q 048154 65 LRAILMETMHLYPVAPLQLPHQS-ME--DCTVSGYHVCAGTQHFVNA 108 (121)
Q Consensus 65 l~~~~~E~~r~~~~~~~~~~r~~-~~--~~~~~g~~ip~g~~v~~~~ 108 (121)
..--++|.+++.+....-+.|.+ .+ |+.++|..|.+|..|.++-
T Consensus 317 T~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVdd 363 (372)
T PRK05933 317 YSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALGD 363 (372)
T ss_pred ccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEECC
Confidence 45568999999887766655554 34 4677999999999998753
No 40
>PF11138 DUF2911: Protein of unknown function (DUF2911); InterPro: IPR021314 This bacterial family of proteins has no known function.
Probab=43.34 E-value=25 Score=21.53 Aligned_cols=24 Identities=25% Similarity=0.293 Sum_probs=18.8
Q ss_pred eeccCCceecceeeCCCCEEeecc
Q 048154 85 HQSMEDCTVSGYHVCAGTQHFVNA 108 (121)
Q Consensus 85 r~~~~~~~~~g~~ip~g~~v~~~~ 108 (121)
-...+|+.++|..||+|+.-++..
T Consensus 50 i~f~~dv~igGk~l~AG~Ysl~ti 73 (145)
T PF11138_consen 50 ITFSKDVTIGGKKLKAGTYSLFTI 73 (145)
T ss_pred EEECCCeEECCEEcCCeeEEEEEe
Confidence 455788999999999999666543
No 41
>PF01629 DUF22: Domain of unknown function DUF22; InterPro: IPR002572 This region is found in 1 to 3 copies in archaeal proteins whose function is unknown. It only appears in multiple copies in proteins from Archaeoglobus fulgidus.
Probab=41.54 E-value=26 Score=20.41 Aligned_cols=23 Identities=13% Similarity=-0.031 Sum_probs=18.7
Q ss_pred ecceeeCCCCEEeecchhhhcCC
Q 048154 93 VSGYHVCAGTQHFVNALKVHHDP 115 (121)
Q Consensus 93 ~~g~~ip~g~~v~~~~~~~~~d~ 115 (121)
+....||+++.++.+.++-|.-.
T Consensus 59 Ik~I~iP~~tIv~p~~~~rha~G 81 (112)
T PF01629_consen 59 IKKIEIPPNTIVMPCAYMRHALG 81 (112)
T ss_pred EEEEecCCCCEEEEchHhhccCc
Confidence 34588899999999999888643
No 42
>PF14824 Sirohm_synth_M: Sirohaem biosynthesis protein central; PDB: 1KYQ_B.
Probab=40.62 E-value=36 Score=14.82 Aligned_cols=15 Identities=7% Similarity=0.089 Sum_probs=11.0
Q ss_pred CHHHHHHHHHHHHHH
Q 048154 33 NRDALKKAQDELDIH 47 (121)
Q Consensus 33 ~p~~~~~l~~ei~~~ 47 (121)
.|....++++||.+.
T Consensus 15 sP~la~~iR~~ie~~ 29 (30)
T PF14824_consen 15 SPRLARLIRKEIERL 29 (30)
T ss_dssp -HHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHh
Confidence 477888888888764
No 43
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=39.65 E-value=44 Score=15.60 Aligned_cols=19 Identities=16% Similarity=0.013 Sum_probs=14.8
Q ss_pred HHHHHHHhhCHHHHHHHHH
Q 048154 24 NFLISLLLNNRDALKKAQD 42 (121)
Q Consensus 24 ~~~~~~l~~~p~~~~~l~~ 42 (121)
-|.+.-++++|++|.-+.-
T Consensus 13 l~gl~~~l~DpdvqrgL~~ 31 (42)
T PF07849_consen 13 LFGLLRALRDPDVQRGLGF 31 (42)
T ss_pred HHHHHHHHcCHHHHHHHHH
Confidence 3667788999999887763
No 44
>TIGR01260 ATP_synt_c ATP synthase, F0 subunit c. This model describes the subunit c in F1/F0-ATP synthase, a membrane associated multisubunit complex found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The functional role of subunit c, which is the part of F0 cluster, has been delineated in-vitro reconstitution experiments. Overall experimental proof exists that demonstrate the electrochemical gradient is converted into a rotational torque that leads to ATP synthesis.
Probab=36.92 E-value=61 Score=16.42 Aligned_cols=23 Identities=4% Similarity=-0.068 Sum_probs=19.5
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHH
Q 048154 21 RLTNFLISLLLNNRDALKKAQDE 43 (121)
Q Consensus 21 ~~~~~~~~~l~~~p~~~~~l~~e 43 (121)
...+.++-.++++|+...+++.-
T Consensus 11 ~i~~~a~~~iaRqPe~~~~l~~~ 33 (58)
T TIGR01260 11 ILGGKFLESAARQPELKPLLRTT 33 (58)
T ss_pred HHHHHHHHHHHcChhHHHhHHHH
Confidence 66778888999999999988864
No 45
>PF14483 Cut8_M: Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=33.84 E-value=55 Score=15.00 Aligned_cols=22 Identities=9% Similarity=0.107 Sum_probs=15.1
Q ss_pred HHHHHHHHHHh-hCHHHHHHHHH
Q 048154 21 RLTNFLISLLL-NNRDALKKAQD 42 (121)
Q Consensus 21 ~~~~~~~~~l~-~~p~~~~~l~~ 42 (121)
..+..++..+. +||++++.++.
T Consensus 13 ~qL~~lL~~l~~~HPei~~~i~~ 35 (38)
T PF14483_consen 13 DQLQSLLQSLCERHPEIQQEIRS 35 (38)
T ss_dssp HHHHHHHHHHHHHSTHHHHHHHT
T ss_pred HHHHHHHHHHHHhChhHHHHHHh
Confidence 45555555555 89999888764
No 46
>PF15300 INT_SG_DDX_CT_C: INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=33.21 E-value=30 Score=18.07 Aligned_cols=13 Identities=15% Similarity=0.427 Sum_probs=11.2
Q ss_pred HHHHHHHHHHhcc
Q 048154 63 VYLRAILMETMHL 75 (121)
Q Consensus 63 ~~l~~~~~E~~r~ 75 (121)
-++..+++|+.|+
T Consensus 41 ~fv~~~IkEA~RF 53 (65)
T PF15300_consen 41 QFVEMIIKEAARF 53 (65)
T ss_pred HHHHHHHHHHHHH
Confidence 4688999999997
No 47
>PF06522 B12D: NADH-ubiquinone reductase complex 1 MLRQ subunit; InterPro: IPR010530 The MLRQ subunit of mitochondrial NADH-ubiquinone reductase complex I is nuclear [] and is found in plants [], insects, fungi and higher metazoans []. It appears to act within the membrane and, in mammals, is highly expressed in muscle and neural tissue, indicative of a role in ATP generation [].
Probab=31.56 E-value=34 Score=18.15 Aligned_cols=17 Identities=41% Similarity=0.460 Sum_probs=12.6
Q ss_pred HHHHHHHHHHhhCHHHH
Q 048154 21 RLTNFLISLLLNNRDAL 37 (121)
Q Consensus 21 ~~~~~~~~~l~~~p~~~ 37 (121)
.+..++...++.+|++.
T Consensus 19 ~a~~~~~r~l~~~PdV~ 35 (73)
T PF06522_consen 19 GATFYLYRLLLTNPDVR 35 (73)
T ss_pred HHHHHHHHHHhcCCCeE
Confidence 56667777788999863
No 48
>COG1886 FliN Flagellar motor switch/type III secretory pathway protein [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=31.45 E-value=61 Score=19.48 Aligned_cols=42 Identities=21% Similarity=0.168 Sum_probs=31.3
Q ss_pred HHHHHHHhccCCCCCCCCceeccCC--ceecceeeCCCCEEeec
Q 048154 66 RAILMETMHLYPVAPLQLPHQSMED--CTVSGYHVCAGTQHFVN 107 (121)
Q Consensus 66 ~~~~~E~~r~~~~~~~~~~r~~~~~--~~~~g~~ip~g~~v~~~ 107 (121)
.--++|.+++.......+.+.+.++ +.++|..|=+|..|.+.
T Consensus 83 ~~~l~ell~l~~Gsvi~Ld~~~~~~VdI~vNg~~Ig~GEvVvvd 126 (136)
T COG1886 83 KMPLGELLALGKGSVIELDKLAGEPVDILVNGRLIGRGEVVVVD 126 (136)
T ss_pred eeeHHHHHhcCCCCEEEcCCcCCCceEEEECCEEEEEEeEEEEC
Confidence 3457888888887666666766666 45589999999988764
No 49
>PLN03044 GTP cyclohydrolase I; Provisional
Probab=30.83 E-value=1e+02 Score=19.81 Aligned_cols=27 Identities=0% Similarity=-0.006 Sum_probs=21.9
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHh
Q 048154 22 LTNFLISLLLNNRDALKKAQDELDIHV 48 (121)
Q Consensus 22 ~~~~~~~~l~~~p~~~~~l~~ei~~~~ 48 (121)
-+.-.+-..++.|.+|+++-.+|...+
T Consensus 103 Kl~RiV~~~arRlQiQERLT~qIa~~l 129 (188)
T PLN03044 103 KLARIAEVYARRLQTQERLTRQIADAI 129 (188)
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 455677788999999999999987654
No 50
>cd00642 GTP_cyclohydro1 GTP cyclohydrolase I (GTP-CH-I) catalyzes the conversion of GTP into dihydroneopterin triphosphate. The enzyme product is the precursor of tetrahydrofolate in eubacteria, fungi, and plants and of the folate analogs in methanogenic bacteria. In vertebrates and insects it is the biosynthtic precursor of tetrahydrobiopterin (BH4) which is involved in the formation of catacholamines, nitric oxide, and the stimulation of T lymphocytes. The biosynthetic reaction of BH4 is controlled by a regulatory protein GFRP which mediates feedback inhibition of GTP-CH-I by BH4. This inhibition is reversed by phenylalanine. The decameric GTP-CH-I forms a complex with two pentameric GFRP in the presence of phenylalanine or a combination of GTP and BH4, respectively.
Probab=29.78 E-value=1e+02 Score=19.69 Aligned_cols=27 Identities=0% Similarity=0.146 Sum_probs=21.9
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHh
Q 048154 22 LTNFLISLLLNNRDALKKAQDELDIHV 48 (121)
Q Consensus 22 ~~~~~~~~l~~~p~~~~~l~~ei~~~~ 48 (121)
-+.-.+-..++.|.+|+++-.+|...+
T Consensus 102 Kl~RiV~~~arRlQiQERLt~qIa~al 128 (185)
T cd00642 102 KLARIVEFFSRRLQVQERLTKQIAVAI 128 (185)
T ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 445567788999999999999987754
No 51
>MTH00222 ATP9 ATP synthase F0 subunit 9; Provisional
Probab=29.55 E-value=1e+02 Score=16.69 Aligned_cols=23 Identities=13% Similarity=-0.081 Sum_probs=19.8
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHH
Q 048154 21 RLTNFLISLLLNNRDALKKAQDE 43 (121)
Q Consensus 21 ~~~~~~~~~l~~~p~~~~~l~~e 43 (121)
+..+..+-..+++||...+++..
T Consensus 29 ~~~~~~~e~vaRqPe~~~~l~~~ 51 (77)
T MTH00222 29 TVFGNLIIGYARNPSLKQQLFTY 51 (77)
T ss_pred HHHHHHHHHHHcChhhHHhHHHH
Confidence 67778889999999999999864
No 52
>PF06596 PsbX: Photosystem II reaction centre X protein (PsbX); InterPro: IPR009518 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. The low molecular weight transmembrane protein PsbX found in PSII is associated with the oxygen-evolving complex. Its expression is light-regulated. PsbX appears to be involved in the regulation of the amount of PSII [], and may be involved in the binding or turnover of quinone molecules at the Qb (PsbA) site [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0016020 membrane; PDB: 3ARC_x 3A0H_X 3A0B_X 3PRR_X 1S5L_x 4FBY_j 3PRQ_X 3KZI_X 3BZ2_X 3BZ1_X.
Probab=28.52 E-value=74 Score=14.79 Aligned_cols=32 Identities=0% Similarity=-0.152 Sum_probs=19.3
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHHhhCHHH
Q 048154 4 IQFHIIFVFVDLERFHTRLTNFLISLLLNNRDA 36 (121)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~ 36 (121)
+.+.+..+++|+.-.. ..++-++.+..+...+
T Consensus 5 L~nfl~Sl~aG~~iVv-~~i~~ali~VSq~D~v 36 (39)
T PF06596_consen 5 LSNFLLSLVAGAVIVV-IPIAGALIFVSQFDRV 36 (39)
T ss_dssp HHHHHHHHHHHH-HHH-HHHHHHHHHHHCCS--
T ss_pred HHHHHHHHHhhhhhhh-hhhhhheEEEeccCcc
Confidence 4566777788875555 5666677777665443
No 53
>TIGR00063 folE GTP cyclohydrolase I. GTP cyclohydrolase I (EC 3.5.4.16) catalyzes the biosynthesis of formic acid and dihydroneopterin triphosphate from GTP. This reaction is the first step in the biosynthesis of tetrahydrofolate in prokaryotes, of tetrahydrobiopterin in vertebrates, and of pteridine-containing pigments in insects.
Probab=28.45 E-value=1.1e+02 Score=19.41 Aligned_cols=27 Identities=0% Similarity=0.100 Sum_probs=21.6
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHh
Q 048154 22 LTNFLISLLLNNRDALKKAQDELDIHV 48 (121)
Q Consensus 22 ~~~~~~~~l~~~p~~~~~l~~ei~~~~ 48 (121)
-+.-.+-..++.|.+|+++-.+|...+
T Consensus 97 Kl~RiV~~~arRlQiQERlT~qIa~~l 123 (180)
T TIGR00063 97 KIARIVEFFARRPQVQERLTQQIAEAL 123 (180)
T ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 445567788999999999999887654
No 54
>PF11059 DUF2860: Protein of unknown function (DUF2860); InterPro: IPR016896 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=27.99 E-value=53 Score=22.73 Aligned_cols=26 Identities=23% Similarity=0.385 Sum_probs=23.0
Q ss_pred eeeCCCCEEeecchhhhcCCCCCCCC
Q 048154 96 YHVCAGTQHFVNALKVHHDPKVWQEP 121 (121)
Q Consensus 96 ~~ip~g~~v~~~~~~~~~d~~~~~~P 121 (121)
+.+..|+.|.++....-...++|.||
T Consensus 81 ~~l~~~~~~~~s~lpti~~~e~W~DP 106 (297)
T PF11059_consen 81 QQLGSGTVVDFSYLPTIMSGEVWEDP 106 (297)
T ss_pred eeccCCcEEEEEEeccCCCCccccCc
Confidence 67899999999888888889999998
No 55
>COG1417 Uncharacterized conserved protein [Function unknown]
Probab=27.73 E-value=49 Score=22.48 Aligned_cols=23 Identities=4% Similarity=-0.103 Sum_probs=18.8
Q ss_pred ceecceeeCCCCEEeecchhhhc
Q 048154 91 CTVSGYHVCAGTQHFVNALKVHH 113 (121)
Q Consensus 91 ~~~~g~~ip~g~~v~~~~~~~~~ 113 (121)
+.+....||++|.|+++.++.|.
T Consensus 86 IkIk~V~lPpnTVv~p~~~arna 108 (288)
T COG1417 86 IKIKEVELPPNTVVVPLPYARNA 108 (288)
T ss_pred EEEEEeccCCCcEEEEchhhcCc
Confidence 34456889999999999998775
No 56
>COG0302 FolE GTP cyclohydrolase I [Coenzyme metabolism]
Probab=27.22 E-value=1.5e+02 Score=19.19 Aligned_cols=27 Identities=0% Similarity=0.106 Sum_probs=21.7
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHh
Q 048154 22 LTNFLISLLLNNRDALKKAQDELDIHV 48 (121)
Q Consensus 22 ~~~~~~~~l~~~p~~~~~l~~ei~~~~ 48 (121)
-+.-++-..++.|.+|+++-.+|..++
T Consensus 111 KiaRiV~~~arR~QvQErlT~qIA~al 137 (195)
T COG0302 111 KIARIVDIFARRLQVQERLTEQIADAL 137 (195)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 445567788899999999999987754
No 57
>COG4732 Predicted membrane protein [Function unknown]
Probab=26.00 E-value=1.7e+02 Score=18.23 Aligned_cols=34 Identities=12% Similarity=0.169 Sum_probs=19.8
Q ss_pred HHHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHHH
Q 048154 8 IIFVFVDLERFHTRLTNFLISLLLNNRDALKKAQD 42 (121)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~ 42 (121)
...+++++.-.. +++++..+--++..++.+|++.
T Consensus 136 ~~~~i~ssTliG-t~isf~alvaL~k~g~~~rl~~ 169 (177)
T COG4732 136 YTIFIFSSTLIG-TIISFFALVALIKQGFFKRLQG 169 (177)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHhhHHHHhcC
Confidence 334455554444 6666666666666676666653
No 58
>PRK12606 GTP cyclohydrolase I; Reviewed
Probab=25.82 E-value=1.4e+02 Score=19.48 Aligned_cols=27 Identities=4% Similarity=0.094 Sum_probs=21.8
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHh
Q 048154 22 LTNFLISLLLNNRDALKKAQDELDIHV 48 (121)
Q Consensus 22 ~~~~~~~~l~~~p~~~~~l~~ei~~~~ 48 (121)
-+.-.+-..++.|.+|+++-.+|...+
T Consensus 117 Kl~RiV~~~arRlQvQERLT~qIa~~l 143 (201)
T PRK12606 117 KIARIVDMFARRLQIQENLTRQIATAV 143 (201)
T ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 445577788999999999999987654
No 59
>COG3106 Predicted ATPase [General function prediction only]
Probab=25.76 E-value=2.3e+02 Score=20.67 Aligned_cols=84 Identities=14% Similarity=0.198 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHhcCCCC-------CCcccCCCCHHHHHHHHHHhccCCCCCCCCceeccCCcee-cceeeCCCCE-Eee-
Q 048154 37 LKKAQDELDIHVGAKRQ-------VNESDIKNLVYLRAILMETMHLYPVAPLQLPHQSMEDCTV-SGYHVCAGTQ-HFV- 106 (121)
Q Consensus 37 ~~~l~~ei~~~~~~~~~-------~~~~~~~~l~~l~~~~~E~~r~~~~~~~~~~r~~~~~~~~-~g~~ip~g~~-v~~- 106 (121)
.++++.|++...+..-. ......++-.+..+.++..+..+......+.- +.++-.+ +-..+|+-.. |--
T Consensus 2 ~~~~~~el~~l~~Rg~d~~lRLaVTGLSRaGKTaFItslVnqLl~~~~g~rLPlfe-a~R~gri~~vkrvpQ~d~~vPRF 80 (467)
T COG3106 2 MKRLRIELNALINRGVDRHLRLAVTGLSRSGKTAFITSLVNQLLHIHGGARLPLFE-AVREGRLLGVKRVPQPDDAVPRF 80 (467)
T ss_pred hhHHHHHHHHHHhccCCccceeeeecccccCceehHHHHHHHHHhhcCCCCcccch-hhhccchhheeecCCcccCCccc
Confidence 35677777777654311 12233455678888888888554432222111 2222222 2234443332 211
Q ss_pred ----cchhhhcCCCCCCCC
Q 048154 107 ----NALKVHHDPKVWQEP 121 (121)
Q Consensus 107 ----~~~~~~~d~~~~~~P 121 (121)
.+.+...||..||+|
T Consensus 81 ~Yee~l~~L~~~pp~WP~s 99 (467)
T COG3106 81 QYEEHLAALYGDPPAWPDS 99 (467)
T ss_pred cHHHHHHHHhcCCCcCCCc
Confidence 334577889899886
No 60
>PRK13466 F0F1 ATP synthase subunit C; Provisional
Probab=25.65 E-value=1.1e+02 Score=15.96 Aligned_cols=24 Identities=13% Similarity=0.022 Sum_probs=20.2
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHH
Q 048154 21 RLTNFLISLLLNNRDALKKAQDEL 44 (121)
Q Consensus 21 ~~~~~~~~~l~~~p~~~~~l~~ei 44 (121)
...+.++-.++++|+.+.+++...
T Consensus 21 ~~~~~~~e~vaRqPea~~~l~~~~ 44 (66)
T PRK13466 21 LLVASYLSSTARQPEMQSKLMAGV 44 (66)
T ss_pred HHHHHHHHHHHcChhHHHhHHHHH
Confidence 677788889999999999998643
No 61
>PRK05880 F0F1 ATP synthase subunit C; Validated
Probab=24.28 E-value=1.4e+02 Score=16.40 Aligned_cols=24 Identities=21% Similarity=0.093 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHH
Q 048154 21 RLTNFLISLLLNNRDALKKAQDEL 44 (121)
Q Consensus 21 ~~~~~~~~~l~~~p~~~~~l~~ei 44 (121)
...+.++-.++++||...+++...
T Consensus 30 ~v~~~a~eaiaRqPEa~~~l~~~m 53 (81)
T PRK05880 30 VAGNALISGVARQPEAQGRLFTPF 53 (81)
T ss_pred HHHHHHHHHHHcChhHHHhHHHHH
Confidence 777788999999999999998643
No 62
>KOG4189 consensus Uncharacterized conserved protein [Function unknown]
Probab=24.26 E-value=1.4e+02 Score=19.47 Aligned_cols=27 Identities=11% Similarity=0.159 Sum_probs=22.0
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHH
Q 048154 21 RLTNFLISLLLNNRDALKKAQDELDIH 47 (121)
Q Consensus 21 ~~~~~~~~~l~~~p~~~~~l~~ei~~~ 47 (121)
+++.-++|.|-..|+...+++++++.+
T Consensus 152 tAV~~amYtLPTR~~lL~~Lk~d~~~~ 178 (209)
T KOG4189|consen 152 TAVAAAMYTLPTRPELLCRLKEDMDAA 178 (209)
T ss_pred HHHHHHHHhCCCcHHHHHHHHhHHHHH
Confidence 445568899999999999999988654
No 63
>PRK13467 F0F1 ATP synthase subunit C; Provisional
Probab=24.21 E-value=1.2e+02 Score=15.85 Aligned_cols=23 Identities=9% Similarity=0.013 Sum_probs=20.0
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHH
Q 048154 21 RLTNFLISLLLNNRDALKKAQDE 43 (121)
Q Consensus 21 ~~~~~~~~~l~~~p~~~~~l~~e 43 (121)
...+.++-.++++||.+.+++..
T Consensus 21 ~v~~~a~e~iaRqPE~~~~i~~~ 43 (66)
T PRK13467 21 FLMANLFKSAARQPEMIGQLRSL 43 (66)
T ss_pred HHHHHHHHHHHcChhHHHhHHHH
Confidence 67778889999999999999864
No 64
>PRK09347 folE GTP cyclohydrolase I; Provisional
Probab=23.61 E-value=1.5e+02 Score=19.06 Aligned_cols=27 Identities=0% Similarity=0.075 Sum_probs=21.7
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHh
Q 048154 22 LTNFLISLLLNNRDALKKAQDELDIHV 48 (121)
Q Consensus 22 ~~~~~~~~l~~~p~~~~~l~~ei~~~~ 48 (121)
-+.-.+-..++.|.+|+++-.+|...+
T Consensus 105 Kl~Riv~~~arRlQiQERlT~qIa~al 131 (188)
T PRK09347 105 KIARIVDFFARRPQVQERLTAQIADAL 131 (188)
T ss_pred HHHHHHHHHHcCchhHHHHHHHHHHHH
Confidence 445677788999999999999887654
No 65
>PF10264 Stork_head: Winged helix Storkhead-box1 domain; InterPro: IPR019391 In humans the Storkhead-box protein controls polyploidization of extravillus trophoblast and is implicated in pre-eclampsia []. This entry represents the conserved N-terminal winged-helix domain, which is likely to bind DNA.
Probab=23.42 E-value=1.3e+02 Score=16.48 Aligned_cols=38 Identities=13% Similarity=0.077 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhhC--HHHHHHHHHHHHHHhcCCCCCCccc
Q 048154 21 RLTNFLISLLLNN--RDALKKAQDELDIHVGAKRQVNESD 58 (121)
Q Consensus 21 ~~~~~~~~~l~~~--p~~~~~l~~ei~~~~~~~~~~~~~~ 58 (121)
-.++|++..|... +--++.+++.+.+.+++-..++.+.
T Consensus 14 EvlC~~I~dln~~~~~at~E~l~~~L~~~yp~i~~Ps~e~ 53 (80)
T PF10264_consen 14 EVLCWVISDLNAAGQPATQETLREHLRKHYPGIAIPSQEV 53 (80)
T ss_pred HHHHHHHHHHhccCCcchHHHHHHHHHHhCCCCCCCCHHH
Confidence 5677888777754 4568899999988877655554443
No 66
>PF09500 YiiD_Cterm: Putative thioesterase (yiiD_Cterm); InterPro: IPR012660 This entry consists of a broadly distributed uncharacterised domain found often as a standalone protein. The member from is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an N-terminal acetyltransferase domain (IPR000182 from INTERPRO). The function of these proteins are unknown. ; PDB: 1T82_C.
Probab=23.29 E-value=1.1e+02 Score=18.74 Aligned_cols=22 Identities=14% Similarity=-0.011 Sum_probs=16.8
Q ss_pred HHhhhhhhHHHHHHHHHHHHhh
Q 048154 11 VFVDLERFHTRLTNFLISLLLN 32 (121)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~~ 32 (121)
+|+|+-.+.++..+|++.+|..
T Consensus 46 ~FgGSl~slatLaGW~lv~l~l 67 (144)
T PF09500_consen 46 MFGGSLYSLATLAGWGLVWLQL 67 (144)
T ss_dssp B-HHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHH
Confidence 4778777777888899988874
No 67
>PRK03636 hypothetical protein; Provisional
Probab=23.17 E-value=65 Score=20.50 Aligned_cols=22 Identities=14% Similarity=0.329 Sum_probs=19.4
Q ss_pred HHHHHHHHHHhhCHHHHHHHHH
Q 048154 21 RLTNFLISLLLNNRDALKKAQD 42 (121)
Q Consensus 21 ~~~~~~~~~l~~~p~~~~~l~~ 42 (121)
.-..|.+.+|+.|++.+++++-
T Consensus 24 Re~~wiLnyl~~h~~lL~~VHF 45 (179)
T PRK03636 24 RECVWILNYLMSHDQLMEKVHF 45 (179)
T ss_pred hHHHHHHHHHHhCHHHHhheee
Confidence 6678999999999999999873
No 68
>PRK03057 hypothetical protein; Provisional
Probab=21.50 E-value=66 Score=20.50 Aligned_cols=33 Identities=18% Similarity=0.349 Sum_probs=23.6
Q ss_pred HHHHhhhhhhHHHHHHHHHHHHhhCHHHHHHHH
Q 048154 9 IFVFVDLERFHTRLTNFLISLLLNNRDALKKAQ 41 (121)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~ 41 (121)
+-++......-..-..|.+.+|+.|++.+++++
T Consensus 10 i~wfL~~y~lK~Re~~wiLnYl~~h~~lL~~VH 42 (180)
T PRK03057 10 LTWFLNNHRLKHPDARFVLLYLLQHPHLLENVH 42 (180)
T ss_pred HHHHHHhccccchhHHHHHHHHHcCHHHHhhee
Confidence 333433333333677899999999999999987
No 69
>PF11998 DUF3493: Protein of unknown function (DUF3493); InterPro: IPR021883 This family of proteins is functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 79 to 331 amino acids in length.
Probab=21.36 E-value=93 Score=16.78 Aligned_cols=15 Identities=7% Similarity=0.169 Sum_probs=12.4
Q ss_pred CHHHHHHHHHHHHHH
Q 048154 33 NRDALKKAQDELDIH 47 (121)
Q Consensus 33 ~p~~~~~l~~ei~~~ 47 (121)
+|+..+|+++|...-
T Consensus 2 ~~~~~~rLraE~~aP 16 (75)
T PF11998_consen 2 DPEQYARLRAEAQAP 16 (75)
T ss_pred CHHHHHHHHHHHHCc
Confidence 688889999998764
No 70
>PRK13990 cell division topological specificity factor MinE; Provisional
Probab=21.13 E-value=1.1e+02 Score=17.13 Aligned_cols=17 Identities=24% Similarity=0.171 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHhcC
Q 048154 34 RDALKKAQDELDIHVGA 50 (121)
Q Consensus 34 p~~~~~l~~ei~~~~~~ 50 (121)
|+..+.+++||-+++..
T Consensus 42 pd~L~~lk~eIl~VI~K 58 (90)
T PRK13990 42 SHLLAELKDEIIEVVKK 58 (90)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 46778888887776654
No 71
>PF06249 EutQ: Ethanolamine utilisation protein EutQ; InterPro: IPR010424 The eut operon of Salmonella typhimurium encodes proteins involved in the cobalamin-dependent degradation of ethanolamine. The role of EutQ in this process is unclear [].; PDB: 2PYT_B 3LWC_A.
Probab=20.87 E-value=73 Score=19.72 Aligned_cols=13 Identities=8% Similarity=0.107 Sum_probs=9.1
Q ss_pred eeeCCCCEEeecc
Q 048154 96 YHVCAGTQHFVNA 108 (121)
Q Consensus 96 ~~ip~g~~v~~~~ 108 (121)
..||+|+.|.++.
T Consensus 123 i~iPkGs~I~fst 135 (152)
T PF06249_consen 123 IFIPKGSTITFST 135 (152)
T ss_dssp EEE-TT-EEEEEE
T ss_pred EEECCCCEEEEec
Confidence 6889999999875
No 72
>PRK13989 cell division topological specificity factor MinE; Provisional
Probab=20.06 E-value=97 Score=17.02 Aligned_cols=17 Identities=29% Similarity=0.229 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHhcC
Q 048154 34 RDALKKAQDELDIHVGA 50 (121)
Q Consensus 34 p~~~~~l~~ei~~~~~~ 50 (121)
|+..+.+++||-+++..
T Consensus 37 p~~l~~lk~dil~VIsK 53 (84)
T PRK13989 37 PDYLPALQKELVAVISK 53 (84)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 66777777777776544
No 73
>PF01227 GTP_cyclohydroI: GTP cyclohydrolase I; InterPro: IPR020602 GTP cyclohydrolase I (3.5.4.16 from EC) catalyses the biosynthesis of formic acid and dihydroneopterin triphosphate from GTP. This reaction is the first step in the biosynthesis of tetrahydrofolate in prokaryotes, of tetrahydrobiopterin in vertebrates, and of pteridine-containing pigments in insects. The comparison of the sequence of the enzyme from bacterial and eukaryotic sources shows that the structure of this enzyme has been extremely well conserved throughout evolution []. NADPH-dependent nitrile oxidoreductases are involved in the biosynthesis of queuosine, a 7-deazaguanine-modified nucleoside found in tRNA(GUN) of bacteria and eukaryotes []. This entry represents a common fold found in GTP cyclohydrolase I and NADPH-dependent nitrile oxidoreducases [].; PDB: 1A8R_E 1GTP_L 1N3R_O 1N3T_O 1FBX_I 1N3S_B 1A9C_I 1IS8_E 1IS7_G 1WPL_F ....
Probab=20.04 E-value=1e+02 Score=19.64 Aligned_cols=28 Identities=0% Similarity=0.031 Sum_probs=21.1
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHh
Q 048154 21 RLTNFLISLLLNNRDALKKAQDELDIHV 48 (121)
Q Consensus 21 ~~~~~~~~~l~~~p~~~~~l~~ei~~~~ 48 (121)
.-+.-.+-..++.|.+|+++-.+|...+
T Consensus 96 SKl~RiV~~~arRlQlQERLT~qIa~~l 123 (179)
T PF01227_consen 96 SKLARIVDFFARRLQLQERLTRQIADAL 123 (179)
T ss_dssp HHHHHHHHHHHSSEE-HHHHHHHHHHHH
T ss_pred hHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 3455677788999999999999887653
Done!