BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048160
(344 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 154/303 (50%), Gaps = 20/303 (6%)
Query: 42 IQNFTAQELKAATNNYDPEKVITKDLLYKLYKGFLQDRPISVMKF-------GGNLNSEE 94
++ F+ +EL+ A++N+ + ++ + K+YKG L D + +K GG L +
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ- 83
Query: 95 YCCFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLM 154
+ S H+N+L+ G C+ +LV+ ++A G++A + + SQ P
Sbjct: 84 ----TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ-PPLDW 138
Query: 155 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTH 214
R ++A+ A +AYLH I+ RD+K + IL E+ A DF ++ + H
Sbjct: 139 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH 198
Query: 215 VNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL 274
V V GT G IAPEY+ST +EK+DV+ +G +LLEL+TG+R + N ++ L
Sbjct: 199 VX--XAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 256
Query: 275 QELVRKSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVA 334
+ V+ ++ + +VD + G K++++ ++A+ C S +RP M +V
Sbjct: 257 LDWVKGLLKEKKLEALVDVDLQGN-----YKDEEVEQLIQVALLCTQSSPMERPKMSEVV 311
Query: 335 KQL 337
+ L
Sbjct: 312 RML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 153/303 (50%), Gaps = 20/303 (6%)
Query: 42 IQNFTAQELKAATNNYDPEKVITKDLLYKLYKGFLQDRPISVMKF-------GGNLNSEE 94
++ F+ +EL+ A++N+ + ++ + K+YKG L D + +K GG L +
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ- 75
Query: 95 YCCFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLM 154
+ S H+N+L+ G C+ +LV+ ++A G++A + + SQ P
Sbjct: 76 ----TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ-PPLDW 130
Query: 155 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTH 214
R ++A+ A +AYLH I+ RD+K + IL E+ A DF ++ + H
Sbjct: 131 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH 190
Query: 215 VNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL 274
V V G G IAPEY+ST +EK+DV+ +G +LLEL+TG+R + N ++ L
Sbjct: 191 VX--XAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 248
Query: 275 QELVRKSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVA 334
+ V+ ++ + +VD + G K++++ ++A+ C S +RP M +V
Sbjct: 249 LDWVKGLLKEKKLEALVDVDLQGN-----YKDEEVEQLIQVALLCTQSSPMERPKMSEVV 303
Query: 335 KQL 337
+ L
Sbjct: 304 RML 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 146/293 (49%), Gaps = 19/293 (6%)
Query: 49 ELKAATNNYDPEKVITKDLLYKLYKGFLQDRPISVMKFGGNLNSEEYCCFNCIAFA-SQM 107
+L+ ATNN+D + +I + K+YKG L+D +K +S+ F S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 108 SHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLM--KHRLKVAMEIA 165
H +++ +G C E IL+++++ G L ++ GS L M + RL++ + A
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY---GSDLPTMSMSWEQRLEICIGAA 149
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPE-GKTHVNDNNKVIGT 224
+ YLH +R I+ RD+K IL E V K DF +S E G+TH+ V GT
Sbjct: 150 RGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLX--XVVKGT 204
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSIES 284
G+I PEY EKSDVYSFG +L E+L + S E L E +S +
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR--EMVNLAEWAVESHNN 262
Query: 285 NSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQL 337
++IVDP + + + PE L + + A+KCL+ S +DRP+M V +L
Sbjct: 263 GQLEQIVDPNLA--DKIRPE---SLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 145/293 (49%), Gaps = 19/293 (6%)
Query: 49 ELKAATNNYDPEKVITKDLLYKLYKGFLQDRPISVMKFGGNLNSEEYCCFNCIAFA-SQM 107
+L+ ATNN+D + +I + K+YKG L+D +K +S+ F S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 108 SHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLM--KHRLKVAMEIA 165
H +++ +G C E IL+++++ G L ++ GS L M + RL++ + A
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY---GSDLPTMSMSWEQRLEICIGAA 149
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPE-GKTHVNDNNKVIGT 224
+ YLH +R I+ RD+K IL E V K DF +S E +TH+ V GT
Sbjct: 150 RGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLX--XVVKGT 204
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSIES 284
G+I PEY EKSDVYSFG +L E+L + S E L E +S +
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR--EMVNLAEWAVESHNN 262
Query: 285 NSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQL 337
++IVDP + + + PE L + + A+KCL+ S +DRP+M V +L
Sbjct: 263 GQLEQIVDPNLA--DKIRPE---SLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 34/240 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 163
S+++H NI+K G CL P+ LV E+ G+L + +H L + H + ++
Sbjct: 57 SRVNHPNIVKLYGACLN---PVCLVMEYAEGGSLYNVLH--GAEPLPYYTAAHAMSWCLQ 111
Query: 164 IANAVAYLHVGFSRPIVFRDIKPSTILF-QEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+ VAYLH + ++ RD+KP +L V K DF + I +TH+ +N
Sbjct: 112 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNNK--- 165
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSI 282
G+ ++APE +N +EK DV+S+G +L E++T +R + G + + V
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT-RRKPFDEI--GGPAFRIMWAVHNGT 222
Query: 283 ESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQLHK 342
K + PI L +C SK RP+M ++ K + L +
Sbjct: 223 RPPLIKNLPKPI------------------ESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 264
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 34/240 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 163
S+++H NI+K G CL P+ LV E+ G+L + +H L + H + ++
Sbjct: 56 SRVNHPNIVKLYGACLN---PVCLVMEYAEGGSLYNVLH--GAEPLPYYTAAHAMSWCLQ 110
Query: 164 IANAVAYLHVGFSRPIVFRDIKPSTILF-QEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+ VAYLH + ++ RD+KP +L V K DF + I +TH+ +N
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNNK--- 164
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSI 282
G+ ++APE +N +EK DV+S+G +L E++T +R + G + + V
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT-RRKPFDEI--GGPAFRIMWAVHNGT 221
Query: 283 ESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQLHK 342
K + PI L +C SK RP+M ++ K + L +
Sbjct: 222 RPPLIKNLPKPI------------------ESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 115/225 (51%), Gaps = 17/225 (7%)
Query: 43 QNFTAQELKAATNNYDPEKV------ITKDLLYKLYKGFLQDRPISVMKFGG--NLNSEE 94
+F+ ELK TNN+D + + + +YKG++ + ++V K ++ +EE
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 72
Query: 95 Y-CCFNC-IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF 152
F+ I ++ H+N+++ +G + + LV+ ++ G+L DR+ +G+ P
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPL 130
Query: 153 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK 212
R K+A AN + +LH + RDIK + IL E AK DF ++ + E
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA-SEKF 186
Query: 213 THVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
++++GT ++APE + KSD+YSFG +LLE++TG
Sbjct: 187 AQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 114/225 (50%), Gaps = 17/225 (7%)
Query: 43 QNFTAQELKAATNNYDPEKV------ITKDLLYKLYKGFLQDRPISVMKFGG--NLNSEE 94
+F+ ELK TNN+D + + + +YKG++ + ++V K ++ +EE
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 72
Query: 95 Y-CCFNC-IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF 152
F+ I ++ H+N+++ +G + + LV+ ++ G+L DR+ +G+ P
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPL 130
Query: 153 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK 212
R K+A AN + +LH + RDIK + IL E AK DF ++ + E
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA-SEKF 186
Query: 213 THVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+++GT ++APE + KSD+YSFG +LLE++TG
Sbjct: 187 AQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 115/225 (51%), Gaps = 17/225 (7%)
Query: 43 QNFTAQELKAATNNYDPEKV------ITKDLLYKLYKGFLQDRPISVMKFGG--NLNSEE 94
+F+ ELK TNN+D + + + +YKG++ + ++V K ++ +EE
Sbjct: 7 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 66
Query: 95 Y-CCFNC-IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF 152
F+ I ++ H+N+++ +G + + LV+ ++ G+L DR+ +G+ P
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPL 124
Query: 153 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK 212
R K+A AN + +LH + RDIK + IL E AK DF ++ + +
Sbjct: 125 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 181
Query: 213 THVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
V +++GT ++APE + KSD+YSFG +LLE++TG
Sbjct: 182 QXVM-XXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 113/225 (50%), Gaps = 17/225 (7%)
Query: 43 QNFTAQELKAATNNYDPEKV------ITKDLLYKLYKGFLQDRPISVMKFGG--NLNSEE 94
+F+ ELK TNN+D + + +YKG++ + ++V K ++ +EE
Sbjct: 4 HSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 63
Query: 95 Y-CCFNC-IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF 152
F+ I ++ H+N+++ +G + + LV+ + G+L DR+ +G+ P
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT--PPL 121
Query: 153 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK 212
R K+A AN + +LH + RDIK + IL E AK DF ++ + +
Sbjct: 122 SWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 213 THVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
V ++++GT + APE + KSD+YSFG +LLE++TG
Sbjct: 179 QXVX-XSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITG 221
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 124 LPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRD 183
LP +V E+V TL D +H P K ++V IA+A L+ I+ RD
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEV---IADACQALNFSHQNGIIHRD 141
Query: 184 IKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSD 243
+KP+ I+ N K DF ++ +I + V VIGT +++PE + + +SD
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 244 VYSFGALLLELLTGK 258
VYS G +L E+LTG+
Sbjct: 202 VYSLGCVLYEVLTGE 216
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 124 LPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRD 183
LP +V E+V TL D +H P K ++V IA+A L+ I+ RD
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEV---IADACQALNFSHQNGIIHRD 141
Query: 184 IKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSD 243
+KP+ I+ N K DF ++ +I + V VIGT +++PE + + +SD
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 244 VYSFGALLLELLTGK 258
VYS G +L E+LTG+
Sbjct: 202 VYSLGCVLYEVLTGE 216
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 124 LPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRD 183
LP +V E+V TL D +H P K ++V IA+A L+ I+ RD
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEV---IADACQALNFSHQNGIIHRD 141
Query: 184 IKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSD 243
+KP+ I+ N K DF ++ +I + V VIGT +++PE + + +SD
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 244 VYSFGALLLELLTGK 258
VYS G +L E+LTG+
Sbjct: 202 VYSLGCVLYEVLTGE 216
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 124 LPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRD 183
LP +V E+V TL D +H P K ++V IA+A L+ I+ RD
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEV---IADACQALNFSHQNGIIHRD 141
Query: 184 IKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSD 243
+KP+ I+ N K DF ++ +I + V VIGT +++PE + + +SD
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 244 VYSFGALLLELLTGK 258
VYS G +L E+LTG+
Sbjct: 202 VYSLGCVLYEVLTGE 216
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 124 LPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRD 183
LP +V E+V TL D +H P K ++V IA+A L+ I+ RD
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEV---IADACQALNFSHQNGIIHRD 141
Query: 184 IKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSD 243
+KP+ IL N K DF ++ +I + V VIGT +++PE + + +SD
Sbjct: 142 VKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 244 VYSFGALLLELLTGK 258
VYS G +L E+LTG+
Sbjct: 202 VYSLGCVLYEVLTGE 216
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 124 LPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRD 183
LP +V E+V TL D +H P K ++V IA+A L+ I+ RD
Sbjct: 107 LPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEV---IADACQALNFSHQNGIIHRD 158
Query: 184 IKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSD 243
+KP+ I+ N K DF ++ +I + V VIGT +++PE + + +SD
Sbjct: 159 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 218
Query: 244 VYSFGALLLELLTGK 258
VYS G +L E+LTG+
Sbjct: 219 VYSLGCVLYEVLTGE 233
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 104 ASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 163
+SQ+SH+NI+ + E + LV E++ TL++ I + +G P + + +
Sbjct: 65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI-ESHG----PLSVDTAINFTNQ 119
Query: 164 IANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIG 223
I + + + H IV RDIKP IL K FDF ++ ++ E T + N V+G
Sbjct: 120 ILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE--TSLTQTNHVLG 174
Query: 224 TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
T + +PE +E +D+YS G +L E+L G+
Sbjct: 175 TVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 121/249 (48%), Gaps = 30/249 (12%)
Query: 99 NCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 158
N + + H NIL F+G + +L I V ++ +L +H + F MK +
Sbjct: 57 NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH----ASETKFEMKKLI 111
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
+A + A + YLH ++ I+ RD+K + I E N K DF ++ ++ + +
Sbjct: 112 DIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA-TVKSRWSGSHQF 167
Query: 219 NKVIGTFGFIAPEYMSTANCNE---KSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQ 275
++ G+ ++APE + + N +SDVY+FG +L EL+TG+ + YS+ N + ++
Sbjct: 168 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ-LPYSNI--NNRDQIIE 224
Query: 276 ELVRKSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAK 335
+ R S+ P + P++ K+L++ +CL K +RP+ ++
Sbjct: 225 MVGRGSLS---------PDLSKVRSNCPKRMKRLMA------ECLKKKRDERPSFPRILA 269
Query: 336 QLRQLHKSI 344
++ +L + +
Sbjct: 270 EIEELAREL 278
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 82/156 (52%), Gaps = 6/156 (3%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+A ++ H NI+ F+G + +V E+++ G+L +H +G++ E + RL +
Sbjct: 85 VAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHK-SGAR-EQLDERRRLSM 142
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
A ++A + YLH + PIV RD+K +L ++ K DF +S + +
Sbjct: 143 AYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL---KASXFLXSKX 198
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
GT ++APE + NEKSDVYSFG +L EL T
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 122/252 (48%), Gaps = 36/252 (14%)
Query: 99 NCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 158
N + + H NIL F+G + +L I V ++ +L +H + F MK +
Sbjct: 69 NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH----ASETKFEMKKLI 123
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
+A + A + YLH ++ I+ RD+K + I E N K DF ++ K+ + +
Sbjct: 124 DIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATE----KSRWSGS 176
Query: 219 NK---VIGTFGFIAPEYMSTANCNE---KSDVYSFGALLLELLTGKRISYSSCFENGEEY 272
++ + G+ ++APE + + N +SDVY+FG +L EL+TG+ + YS+ N +
Sbjct: 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ-LPYSNI--NNRDQ 233
Query: 273 FLQELVRKSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQ 332
++ + R S+ P + P++ K+L++ +CL K +RP+ +
Sbjct: 234 IIEMVGRGSLS---------PDLSKVRSNCPKRMKRLMA------ECLKKKRDERPSFPR 278
Query: 333 VAKQLRQLHKSI 344
+ ++ +L + +
Sbjct: 279 ILAEIEELAREL 290
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 85/156 (54%), Gaps = 6/156 (3%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+A ++ H NI+ F+G + +V E+++ G+L +H +G++ E + RL +
Sbjct: 85 VAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHK-SGAR-EQLDERRRLSM 142
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
A ++A + YLH + PIV R++K +L ++ K DF +S + T ++ +
Sbjct: 143 AYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDF--GLSRLKASTFLSSKSA 199
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
GT ++APE + NEKSDVYSFG +L EL T
Sbjct: 200 A-GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 120/250 (48%), Gaps = 36/250 (14%)
Query: 99 NCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 158
N + + H NIL F+G +L I V ++ +L +H + F MK +
Sbjct: 69 NEVGVLRKTRHVNILLFMGYSTAPQLAI-VTQWCEGSSLYHHLH----ASETKFEMKKLI 123
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
+A + A + YLH ++ I+ RD+K + I E N K DF ++ K+ + +
Sbjct: 124 DIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATE----KSRWSGS 176
Query: 219 NK---VIGTFGFIAPEYMSTANCNE---KSDVYSFGALLLELLTGKRISYSSCFENGEEY 272
++ + G+ ++APE + + N +SDVY+FG +L EL+TG+ + YS+ N +
Sbjct: 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ-LPYSNI--NNRDQ 233
Query: 273 FLQELVRKSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQ 332
++ + R S+ P + P++ K+L++ +CL K +RP+ +
Sbjct: 234 IIEMVGRGSLS---------PDLSKVRSNCPKRMKRLMA------ECLKKKRDERPSFPR 278
Query: 333 VAKQLRQLHK 342
+ ++ +L +
Sbjct: 279 ILAEIEELAR 288
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 85 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATY 139
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P + +
Sbjct: 140 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RDD 191
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATY 118
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTT 170
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 171 LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATY 114
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P + +
Sbjct: 115 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RDT 166
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 19/162 (11%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
+ + H NI+ G CL+ LV EF G L +R+ +G ++ P ++ + A++I
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPL-NRVL--SGKRIPPDIL---VNWAVQI 114
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQ--------NVAKFFDFCVSISIPEGKTHVN 216
A + YLH PI+ RD+K S IL ++ + K DF ++ + H
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA-----REWHRT 169
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
G + ++APE + + ++ SDV+S+G LL ELLTG+
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATY 116
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P + +
Sbjct: 117 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RDD 168
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATY 113
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P + +
Sbjct: 114 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTE 165
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATY 114
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P +
Sbjct: 115 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTD 166
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 76 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATY 130
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P +
Sbjct: 131 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTT 182
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 183 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATY 113
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P +
Sbjct: 114 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTD 165
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 48/247 (19%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
S ++H NI+K G L P +V EFV CG L R+ D + P +L++ ++I
Sbjct: 78 SNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLD----KAHPIKWSVKLRLMLDI 131
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQ--EQNV---AKFFDFCVSISIPEGKTHVNDNN 219
A + Y+ + PIV RD++ I Q ++N AK DF +S + V+ +
Sbjct: 132 ALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS------QQSVHSVS 184
Query: 220 KVIGTFGFIAPEYMSTA--NCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQEL 277
++G F ++APE + + EK+D YSF +L +LTG+
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE------------------- 225
Query: 278 VRKSIESNSFKEIVDPIIVGEEGLWP----EKEKQLLSYTELAIKCLSKSEQDRPTMVQV 333
+ S+ +I ++ EEGL P + +L + EL C S + RP +
Sbjct: 226 --GPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIEL---CWSGDPKKRPHFSYI 280
Query: 334 AKQLRQL 340
K+L +L
Sbjct: 281 VKELSEL 287
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATY 116
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P +
Sbjct: 117 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTT 168
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATY 118
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTD 170
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 85 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATY 139
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P +
Sbjct: 140 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTT 191
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 109/248 (43%), Gaps = 45/248 (18%)
Query: 97 CFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKH 156
C++ + + S KN + CL + EF GTL I G +L+ L
Sbjct: 72 CWDGFDYDPETSSKNSSRSKTKCL-----FIQMEFCDKGTLEQWIEKRRGEKLDKVLA-- 124
Query: 157 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIP-EGKTHV 215
L++ +I V Y+H S+ ++ RD+KPS I + K DF + S+ +GK
Sbjct: 125 -LELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK--- 177
Query: 216 NDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQ 275
+ GT +++PE +S+ + ++ D+Y+ G +L ELL + FE
Sbjct: 178 --RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH----VCDTAFET------- 224
Query: 276 ELVRKSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAK 335
S F ++ D II ++ +KEK LL K LSK +DRP ++ +
Sbjct: 225 --------SKFFTDLRDGII---SDIFDKKEKTLLQ------KLLSKKPEDRPNTSEILR 267
Query: 336 QLRQLHKS 343
L KS
Sbjct: 268 TLTVWKKS 275
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATY 118
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTT 170
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATY 113
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P +
Sbjct: 114 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTT 165
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATY 113
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P +
Sbjct: 114 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTD 165
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 61 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATY 115
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P +
Sbjct: 116 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RXX 167
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G ++ L+ E+ GT+ + +L F +
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATY 113
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P +
Sbjct: 114 ITELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RAA 165
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATY 113
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P +
Sbjct: 114 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTX 165
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 48/247 (19%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
S ++H NI+K G L P +V EFV CG L R+ D + P +L++ ++I
Sbjct: 78 SNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLD----KAHPIKWSVKLRLMLDI 131
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQ--EQNV---AKFFDFCVSISIPEGKTHVNDNN 219
A + Y+ + PIV RD++ I Q ++N AK DF +S + V+ +
Sbjct: 132 ALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS------QQSVHSVS 184
Query: 220 KVIGTFGFIAPEYMSTA--NCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQEL 277
++G F ++APE + + EK+D YSF +L +LTG+
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE------------------- 225
Query: 278 VRKSIESNSFKEIVDPIIVGEEGLWP----EKEKQLLSYTELAIKCLSKSEQDRPTMVQV 333
+ S+ +I ++ EEGL P + +L + EL C S + RP +
Sbjct: 226 --GPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIEL---CWSGDPKKRPHFSYI 280
Query: 334 AKQLRQL 340
K+L +L
Sbjct: 281 VKELSEL 287
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATY 116
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P +
Sbjct: 117 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTT 168
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 63 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATY 117
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P +
Sbjct: 118 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTT 169
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 58 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATY 112
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P +
Sbjct: 113 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTT 164
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 165 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 48/247 (19%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
S ++H NI+K G L P +V EFV CG L R+ D + P +L++ ++I
Sbjct: 78 SNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLD----KAHPIKWSVKLRLMLDI 131
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQ--EQNV---AKFFDFCVSISIPEGKTHVNDNN 219
A + Y+ + PIV RD++ I Q ++N AK DF S + V+ +
Sbjct: 132 ALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS------QQSVHSVS 184
Query: 220 KVIGTFGFIAPEYMSTA--NCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQEL 277
++G F ++APE + + EK+D YSF +L +LTG+
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE------------------- 225
Query: 278 VRKSIESNSFKEIVDPIIVGEEGLWP----EKEKQLLSYTELAIKCLSKSEQDRPTMVQV 333
+ S+ +I ++ EEGL P + +L + EL C S + RP +
Sbjct: 226 --GPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIEL---CWSGDPKKRPHFSYI 280
Query: 334 AKQLRQL 340
K+L +L
Sbjct: 281 VKELSEL 287
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 56 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATY 110
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P +
Sbjct: 111 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTT 162
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 163 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATY 116
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P +
Sbjct: 117 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RXX 168
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATY 116
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P +
Sbjct: 117 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RAA 168
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATY 113
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P +
Sbjct: 114 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RXX 165
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATY 113
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P +
Sbjct: 114 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RAA 165
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 63 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSRFDEQRTATY 117
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P + +
Sbjct: 118 ITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR-----RDT 169
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ GT ++ PE + +EK D++S G L E L G
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 61 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATY 115
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K +F S+ P +
Sbjct: 116 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR-----RTT 167
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATY 114
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S P +
Sbjct: 115 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR-----RTT 166
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 167 LSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 13/157 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 63 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSRFDEQRTATY 117
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P +
Sbjct: 118 ITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR-----RTT 169
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ GT ++ PE + +EK D++S G L E L G
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ GT+ + +L F +
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATY 116
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K +F S+ P +
Sbjct: 117 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR-----RTT 168
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ G + + +L F +
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ-----KLSKFDEQRTATY 118
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RXX 170
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 171 LXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 13/158 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ S + H NIL+ G + L+ E+ G + + +L F +
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ-----KLSKFDEQRTATY 118
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+ANA++Y H S+ ++ RDIKP +L K DF S+ P +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-----RTT 170
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT ++ PE + +EK D++S G L E L GK
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 31/238 (13%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
++SH +++ G CLE LVFEF+ G L+D + G F + L + +++
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVC 113
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+AYL ++ RD+ L E V K DF ++ + + + + K
Sbjct: 114 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PV 168
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSIESN 285
+ +PE S + + KSDV+SFG L+ E+ + +I Y E+
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY--------------------ENR 208
Query: 286 SFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQLHKS 343
S E+V+ I G L+ + Y ++ C + +DRP ++ +QL ++ +S
Sbjct: 209 SNSEVVEDISTGFR-LYKPRLASTHVY-QIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 31/238 (13%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
++SH +++ G CLE LVFEF+ G L+D + G F + L + +++
Sbjct: 61 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVC 116
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+AYL ++ RD+ L E V K DF ++ + + + + K
Sbjct: 117 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PV 171
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSIESN 285
+ +PE S + + KSDV+SFG L+ E+ + +I Y E+
Sbjct: 172 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY--------------------ENR 211
Query: 286 SFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQLHKS 343
S E+V+ I G L+ + Y ++ C + +DRP ++ +QL ++ +S
Sbjct: 212 SNSEVVEDISTGFR-LYKPRLASTHVY-QIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 31/238 (13%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
++SH +++ G CLE LVFEF+ G L+D + G F + L + +++
Sbjct: 78 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVC 133
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+AYL ++ RD+ L E V K DF ++ + + + + K
Sbjct: 134 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PV 188
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSIESN 285
+ +PE S + + KSDV+SFG L+ E+ + +I Y E+
Sbjct: 189 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY--------------------ENR 228
Query: 286 SFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQLHKS 343
S E+V+ I G L+ + Y ++ C + +DRP ++ +QL ++ +S
Sbjct: 229 SNSEVVEDISTGFR-LYKPRLASTHVY-QIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 31/238 (13%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
++SH +++ G CLE LVFEF+ G L+D + G F + L + +++
Sbjct: 56 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVC 111
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+AYL ++ RD+ L E V K DF ++ + + + + K
Sbjct: 112 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PV 166
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSIESN 285
+ +PE S + + KSDV+SFG L+ E+ + +I Y E+
Sbjct: 167 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY--------------------ENR 206
Query: 286 SFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQLHKS 343
S E+V+ I G L+ + Y ++ C + +DRP ++ +QL ++ +S
Sbjct: 207 SNSEVVEDISTGFR-LYKPRLASTHVY-QIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 40/216 (18%)
Query: 129 FEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPST 188
EF GTL I G +L+ L L++ +I V Y+H S+ ++ RD+KPS
Sbjct: 113 MEFCDKGTLEQWIEKRRGEKLDKVLA---LELFEQITKGVDYIH---SKKLIHRDLKPSN 166
Query: 189 ILFQEQNVAKFFDFCVSISIP-EGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSF 247
I + K DF + S+ +GK + GT +++PE +S+ + ++ D+Y+
Sbjct: 167 IFLVDTKQVKIGDFGLVTSLKNDGK-----RTRSKGTLRYMSPEQISSQDYGKEVDLYAL 221
Query: 248 GALLLELLTGKRISYSSCFENGEEYFLQELVRKSIESNSFKEIVDPIIVGEEGLWPEKEK 307
G +L ELL + FE S F ++ D II ++ +KEK
Sbjct: 222 GLILAELLH----VCDTAFET---------------SKFFTDLRDGII---SDIFDKKEK 259
Query: 308 QLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQLHKS 343
LL K LSK +DRP ++ + L KS
Sbjct: 260 TLLQ------KLLSKKPEDRPNTSEILRTLTVWKKS 289
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 31/238 (13%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
++SH +++ G CLE LVFEF+ G L+D + G F + L + +++
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVC 113
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+AYL ++ RD+ L E V K DF ++ + + + + K
Sbjct: 114 EGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PV 168
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSIESN 285
+ +PE S + + KSDV+SFG L+ E+ + +I Y E+
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY--------------------ENR 208
Query: 286 SFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQLHKS 343
S E+V+ I G L+ + Y ++ C + +DRP ++ +QL + S
Sbjct: 209 SNSEVVEDISTGFR-LYKPRLASTHVY-QIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 12/152 (7%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 166
+ H+N+++ G L + +V E G+L DR+ G FL+ + A+++A
Sbjct: 72 LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAE 126
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTH--VNDNNKVIGT 224
+ YL S+ + RD+ +L +++ K DF + ++P+ H + ++ KV
Sbjct: 127 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--P 181
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
F + APE + T + SD + FG L E+ T
Sbjct: 182 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 12/152 (7%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 166
+ H+N+++ G L + +V E G+L DR+ G FL+ + A+++A
Sbjct: 78 LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAE 132
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTH--VNDNNKVIGT 224
+ YL S+ + RD+ +L +++ K DF + ++P+ H + ++ KV
Sbjct: 133 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--P 187
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
F + APE + T + SD + FG L E+ T
Sbjct: 188 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 12/152 (7%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 166
+ H+N+++ G L + +V E G+L DR+ G FL+ + A+++A
Sbjct: 78 LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAE 132
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTH--VNDNNKVIGT 224
+ YL S+ + RD+ +L +++ K DF + ++P+ H + ++ KV
Sbjct: 133 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV--P 187
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
F + APE + T + SD + FG L E+ T
Sbjct: 188 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 12/152 (7%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 166
+ H+N+++ G L + +V E G+L DR+ G FL+ + A+++A
Sbjct: 72 LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAE 126
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTH--VNDNNKVIGT 224
+ YL S+ + RD+ +L +++ K DF + ++P+ H + ++ KV
Sbjct: 127 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--P 181
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
F + APE + T + SD + FG L E+ T
Sbjct: 182 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 100/229 (43%), Gaps = 33/229 (14%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 166
+ H+N+++ G L + +V E G+L DR+ G FL+ + A+++A
Sbjct: 68 LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAE 122
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTH--VNDNNKVIGT 224
+ YL S+ + RD+ +L +++ K DF + ++P+ H + ++ KV
Sbjct: 123 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--P 177
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSIES 284
F + APE + T + SD + FG L E+ F G+E ++ +
Sbjct: 178 FAWCAPESLKTRTFSHASDTWMFGVTLWEM-----------FTYGQEPWI------GLNG 220
Query: 285 NSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQV 333
+ +D GE PE Q + ++C + +DRPT V +
Sbjct: 221 SQILHKIDK--EGERLPRPEDCPQ--DIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 100/229 (43%), Gaps = 33/229 (14%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 166
+ H+N+++ G L + +V E G+L DR+ G FL+ + A+++A
Sbjct: 68 LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAE 122
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTH--VNDNNKVIGT 224
+ YL S+ + RD+ +L +++ K DF + ++P+ H + ++ KV
Sbjct: 123 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--P 177
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSIES 284
F + APE + T + SD + FG L E+ F G+E ++ +
Sbjct: 178 FAWCAPESLKTRTFSHASDTWMFGVTLWEM-----------FTYGQEPWI------GLNG 220
Query: 285 NSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQV 333
+ +D GE PE Q + ++C + +DRPT V +
Sbjct: 221 SQILHKIDK--EGERLPRPEDCPQ--DIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 100/229 (43%), Gaps = 33/229 (14%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 166
+ H+N+++ G L + +V E G+L DR+ G FL+ + A+++A
Sbjct: 68 LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAE 122
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTH--VNDNNKVIGT 224
+ YL S+ + RD+ +L +++ K DF + ++P+ H + ++ KV
Sbjct: 123 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV--P 177
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSIES 284
F + APE + T + SD + FG L E+ F G+E ++ +
Sbjct: 178 FAWCAPESLKTRTFSHASDTWMFGVTLWEM-----------FTYGQEPWI------GLNG 220
Query: 285 NSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQV 333
+ +D GE PE Q + ++C + +DRPT V +
Sbjct: 221 SQILHKIDK--EGERLPRPEDCPQ--DIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 105 SQMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 163
+Q+ H N+++ +G +E + + +V E++A G+L D + S L + LK +++
Sbjct: 60 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLD 116
Query: 164 IANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIG 223
+ A+ YL V RD+ +L E NVAK DF ++ + + D K+
Sbjct: 117 VCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT----KEASSTQDTGKL-- 167
Query: 224 TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE + A + KSDV+SFG LL E+ + R+ Y
Sbjct: 168 PVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 158
I ++H+N++KF G E + L E+ + G L DRI +P+ EP + H+L
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 113
Query: 159 KVAMEIANAVAYLH-VGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
V YLH +G I RDIKP +L E++ K DF ++ ++
Sbjct: 114 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERL 162
Query: 218 NNKVIGTFGFIAPEYMSTANCN-EKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQE 276
NK+ GT ++APE + + E DV+S G +L +L G+ + + ++ +EY +
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE-LPWDQPSDSXQEY--SD 219
Query: 277 LVRKSIESNSFKEI 290
K N +K+I
Sbjct: 220 WKEKKTYLNPWKKI 233
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 15/154 (9%)
Query: 107 MSHKNILKFVGCCLETELPIL--VFEFVACGTLADRI--HDPNGSQLEPFLMKHRLKVAM 162
+ H++I+K+ GCC + L V E+V G+L D + H +QL L A
Sbjct: 90 LYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQL--------LLFAQ 141
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I +AYLH ++ + RD+ +L + K DF ++ ++PEG
Sbjct: 142 QICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGD 198
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE + SDV+SFG L ELLT
Sbjct: 199 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Query: 105 SQMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 163
+Q+ H N+++ +G +E + + +V E++A G+L D + S L + LK +++
Sbjct: 69 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLD 125
Query: 164 IANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIG 223
+ A+ YL V RD+ +L E NVAK DF + + + D K+
Sbjct: 126 VCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDF----GLTKEASSTQDTGKL-- 176
Query: 224 TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE + + KSDV+SFG LL E+ + R+ Y
Sbjct: 177 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 158
I ++H+N++KF G E + L E+ + G L DRI +P+ EP + H+L
Sbjct: 56 IXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 114
Query: 159 KVAMEIANAVAYLH-VGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
V YLH +G I RDIKP +L E++ K DF ++ ++
Sbjct: 115 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERL 163
Query: 218 NNKVIGTFGFIAPEYMSTANCN-EKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQE 276
NK+ GT ++APE + + E DV+S G +L +L G+ + + ++ +EY +
Sbjct: 164 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE-LPWDQPSDSCQEY--SD 220
Query: 277 LVRKSIESNSFKEI 290
K N +K+I
Sbjct: 221 WKEKKTYLNPWKKI 234
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Query: 105 SQMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 163
+Q+ H N+++ +G +E + + +V E++A G+L D + S L + LK +++
Sbjct: 54 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLD 110
Query: 164 IANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIG 223
+ A+ YL V RD+ +L E NVAK DF + + + D K+
Sbjct: 111 VCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDF----GLTKEASSTQDTGKL-- 161
Query: 224 TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE + + KSDV+SFG LL E+ + R+ Y
Sbjct: 162 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 51/262 (19%)
Query: 99 NCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 158
N + + H NIL F+G + +L I V ++ +L +H F M +
Sbjct: 55 NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETK----FEMIKLI 109
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
+A + A + YLH ++ I+ RD+K + I E K DF ++ ++ + +
Sbjct: 110 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQF 165
Query: 219 NKVIGTFGFIAPEYMSTANCNE---KSDVYSFGALLLELLTGKRISYSS-------CFEN 268
++ G+ ++APE + + N +SDVY+FG +L EL+TG+ + YS+ F
Sbjct: 166 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINNRDQIIFMV 224
Query: 269 GEEYFLQELVRKSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRP 328
G Y +L + + SN P+ K+L++ +CL K +RP
Sbjct: 225 GRGYLSPDLSK--VRSNC----------------PKAMKRLMA------ECLKKKRDERP 260
Query: 329 TMVQV-------AKQLRQLHKS 343
Q+ A+ L ++H+S
Sbjct: 261 LFPQILASIELLARSLPKIHRS 282
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 104/238 (43%), Gaps = 31/238 (13%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
++SH +++ G CLE LV EF+ G L+D + G F + L + +++
Sbjct: 59 KLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVC 114
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+AYL ++ RD+ L E V K DF ++ + + + + K
Sbjct: 115 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PV 169
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSIESN 285
+ +PE S + + KSDV+SFG L+ E+ + +I Y E+
Sbjct: 170 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY--------------------ENR 209
Query: 286 SFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQLHKS 343
S E+V+ I G L+ + Y ++ C + +DRP ++ +QL ++ +S
Sbjct: 210 SNSEVVEDISTGFR-LYKPRLASTHVY-QIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 158
I ++H+N++KF G E + L E+ + G L DRI +P+ EP + H+L
Sbjct: 55 IXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 113
Query: 159 KVAMEIANAVAYLH-VGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
V YLH +G I RDIKP +L E++ K DF ++ ++
Sbjct: 114 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERL 162
Query: 218 NNKVIGTFGFIAPEYMSTANCN-EKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQE 276
NK+ GT ++APE + + E DV+S G +L +L G+ + + ++ +EY +
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE-LPWDQPSDSCQEY--SD 219
Query: 277 LVRKSIESNSFKEI 290
K N +K+I
Sbjct: 220 WKEKKTYLNPWKKI 233
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 17/161 (10%)
Query: 101 IAFASQMSHKNILKFVGCCL---ETELPILVFEFVACGTLADRI--HDPNGSQLEPFLMK 155
I + H++I+K+ GCC E L LV E+V G+L D + H +QL
Sbjct: 67 IDILRTLYHEHIIKYKGCCEDQGEKSLQ-LVMEYVPLGSLRDYLPRHSIGLAQL------ 119
Query: 156 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHV 215
L A +I +AYLH S+ + R++ +L + K DF ++ ++PEG +
Sbjct: 120 --LLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 174
Query: 216 NDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE + SDV+SFG L ELLT
Sbjct: 175 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Query: 105 SQMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 163
+Q+ H N+++ +G +E + + +V E++A G+L D + S L + LK +++
Sbjct: 241 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLD 297
Query: 164 IANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIG 223
+ A+ YL V RD+ +L E NVAK DF + + + D K+
Sbjct: 298 VCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDF----GLTKEASSTQDTGKL-- 348
Query: 224 TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE + + KSDV+SFG LL E+ + R+ Y
Sbjct: 349 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 19/194 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 158
I + ++H+N++KF G E + L E+ + G L DRI +P+ EP + H+L
Sbjct: 56 ICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 114
Query: 159 KVAMEIANAVAYLH-VGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
V YLH +G I RDIKP +L E++ K DF ++ ++
Sbjct: 115 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERL 163
Query: 218 NNKVIGTFGFIAPEYMSTANCN-EKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQE 276
NK+ GT ++APE + + E DV+S G +L +L G+ + + ++ +EY +
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE-LPWDQPSDSCQEY--SD 220
Query: 277 LVRKSIESNSFKEI 290
K N +K+I
Sbjct: 221 WKEKKTYLNPWKKI 234
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q+ H+ +++ T+ PI ++ E++ G+L D + P+G +L + L +A +I
Sbjct: 64 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 118
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A +A++ R + RD++ + IL + K DF ++ I + + + K
Sbjct: 119 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKF--P 173
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE ++ KSDV+SFG LL E++T RI Y
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 158
I ++H+N++KF G E + L E+ + G L DRI +P+ EP + H+L
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 113
Query: 159 KVAMEIANAVAYLH-VGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
V YLH +G I RDIKP +L E++ K DF ++ ++
Sbjct: 114 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERL 162
Query: 218 NNKVIGTFGFIAPEYMSTANCN-EKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQE 276
NK+ GT ++APE + + E DV+S G +L +L G+ + + ++ +EY +
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE-LPWDQPSDSCQEY--SD 219
Query: 277 LVRKSIESNSFKEI 290
K N +K+I
Sbjct: 220 WKEKKTYLNPWKKI 233
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 158
I ++H+N++KF G E + L E+ + G L DRI +P+ EP + H+L
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 113
Query: 159 KVAMEIANAVAYLH-VGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
V YLH +G I RDIKP +L E++ K DF ++ ++
Sbjct: 114 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERL 162
Query: 218 NNKVIGTFGFIAPEYMSTANCN-EKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQE 276
NK+ GT ++APE + + E DV+S G +L +L G+ + + ++ +EY +
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE-LPWDQPSDSCQEY--SD 219
Query: 277 LVRKSIESNSFKEI 290
K N +K+I
Sbjct: 220 WKEKKTYLNPWKKI 233
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 158
I ++H+N++KF G E + L E+ + G L DRI +P+ EP + H+L
Sbjct: 55 IXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 113
Query: 159 KVAMEIANAVAYLH-VGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
V YLH +G I RDIKP +L E++ K DF ++ ++
Sbjct: 114 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERL 162
Query: 218 NNKVIGTFGFIAPEYMSTANCN-EKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQE 276
NK+ GT ++APE + + E DV+S G +L +L G+ + + ++ +EY +
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE-LPWDQPSDSCQEY--SD 219
Query: 277 LVRKSIESNSFKEI 290
K N +K+I
Sbjct: 220 WKEKKTYLNPWKKI 233
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q+ H+ +++ T+ PI ++ E++ G+L D + P+G +L + L +A +I
Sbjct: 72 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 126
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A +A++ R + RD++ + IL + K DF ++ I + + + K
Sbjct: 127 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF--P 181
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE ++ KSDV+SFG LL E++T RI Y
Sbjct: 182 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 219
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 114/256 (44%), Gaps = 44/256 (17%)
Query: 99 NCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 158
N + + H NIL F+G + +L I V ++ +L +H F M +
Sbjct: 53 NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETK----FEMIKLI 107
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
+A + A + YLH ++ I+ RD+K + I E K DF ++ ++ + +
Sbjct: 108 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQF 163
Query: 219 NKVIGTFGFIAPEYMSTANCNE---KSDVYSFGALLLELLTGKRISYSS-------CFEN 268
++ G+ ++APE + + N +SDVY+FG +L EL+TG+ + YS+ F
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINNRDQIIFMV 222
Query: 269 GEEYFLQELVRKSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRP 328
G Y +L + + SN P+ K+L++ +CL K +RP
Sbjct: 223 GRGYLSPDLSK--VRSNC----------------PKAMKRLMA------ECLKKKRDERP 258
Query: 329 TMVQVAKQLRQLHKSI 344
Q+ + L +S+
Sbjct: 259 LFPQILASIELLARSL 274
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 158
I ++H+N++KF G E + L E+ + G L DRI +P+ EP + H+L
Sbjct: 54 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 112
Query: 159 KVAMEIANAVAYLH-VGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
V YLH +G I RDIKP +L E++ K DF ++ ++
Sbjct: 113 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERL 161
Query: 218 NNKVIGTFGFIAPEYMSTANCN-EKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQE 276
NK+ GT ++APE + + E DV+S G +L +L G+ + + ++ +EY +
Sbjct: 162 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE-LPWDQPSDSCQEY--SD 218
Query: 277 LVRKSIESNSFKEI 290
K N +K+I
Sbjct: 219 WKEKKTYLNPWKKI 232
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q+ H+ +++ T+ PI ++ E++ G+L D + P+G +L + L +A +I
Sbjct: 70 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 124
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A +A++ R + RD++ + IL + K DF ++ I + + + K
Sbjct: 125 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF--P 179
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE ++ KSDV+SFG LL E++T RI Y
Sbjct: 180 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 217
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 158
I ++H+N++KF G E + L E+ + G L DRI +P+ EP + H+L
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 113
Query: 159 KVAMEIANAVAYLH-VGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
V YLH +G I RDIKP +L E++ K DF ++ ++
Sbjct: 114 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERL 162
Query: 218 NNKVIGTFGFIAPEYMSTANCN-EKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQE 276
NK+ GT ++APE + + E DV+S G +L +L G+ + + ++ +EY +
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE-LPWDQPSDSCQEY--SD 219
Query: 277 LVRKSIESNSFKEI 290
K N +K+I
Sbjct: 220 WKEKKTYLNPWKKI 233
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 126/279 (45%), Gaps = 33/279 (11%)
Query: 71 LYKG-FLQDRPISVMKFGGNLNSEEYCCF-NCIAFASQMSHKNILKFVGCCLETELPILV 128
+YKG + D + ++K + E++ F N +A + H NIL F+G + L I V
Sbjct: 52 VYKGKWHGDVAVKILKVV-DPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAI-V 109
Query: 129 FEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPST 188
++ +L +H Q F M + +A + A + YLH ++ I+ RD+K +
Sbjct: 110 TQWCEGSSLYKHLH----VQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNN 162
Query: 189 ILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNE---KSDVY 245
I E K DF ++ ++ + + G+ ++APE + + N +SDVY
Sbjct: 163 IFLHEGLTVKIGDFGLA-TVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVY 221
Query: 246 SFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSIESNSFKEIVDPIIVGEEGLWPEK 305
S+G +L EL+TG+ + YS + F +V + S ++ P+
Sbjct: 222 SYGIVLYELMTGE-LPYSHINNRDQIIF---MVGRGYASPDLSKLYKNC--------PKA 269
Query: 306 EKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQLHKSI 344
K+L++ C+ K +++RP Q+ + L S+
Sbjct: 270 MKRLVA------DCVKKVKEERPLFPQILSSIELLQHSL 302
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 114/256 (44%), Gaps = 44/256 (17%)
Query: 99 NCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 158
N + + H NIL F+G + +L I V ++ +L +H F M +
Sbjct: 81 NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIE----TKFEMIKLI 135
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
+A + A + YLH ++ I+ RD+K + I E K DF ++ ++ + +
Sbjct: 136 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQF 191
Query: 219 NKVIGTFGFIAPEYMSTANCNE---KSDVYSFGALLLELLTGKRISYSS-------CFEN 268
++ G+ ++APE + + N +SDVY+FG +L EL+TG+ + YS+ F
Sbjct: 192 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINNRDQIIFMV 250
Query: 269 GEEYFLQELVRKSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRP 328
G Y +L + + SN P+ K+L++ +CL K +RP
Sbjct: 251 GRGYLSPDLSK--VRSNC----------------PKAMKRLMA------ECLKKKRDERP 286
Query: 329 TMVQVAKQLRQLHKSI 344
Q+ + L +S+
Sbjct: 287 LFPQILASIELLARSL 302
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 114/256 (44%), Gaps = 44/256 (17%)
Query: 99 NCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 158
N + + H NIL F+G + +L I V ++ +L +H F M +
Sbjct: 58 NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIE----TKFEMIKLI 112
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
+A + A + YLH ++ I+ RD+K + I E K DF ++ ++ + +
Sbjct: 113 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQF 168
Query: 219 NKVIGTFGFIAPEYMSTANCNE---KSDVYSFGALLLELLTGKRISYSS-------CFEN 268
++ G+ ++APE + + N +SDVY+FG +L EL+TG+ + YS+ F
Sbjct: 169 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINNRDQIIFMV 227
Query: 269 GEEYFLQELVRKSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRP 328
G Y +L + + SN P+ K+L++ +CL K +RP
Sbjct: 228 GRGYLSPDLSK--VRSNC----------------PKAMKRLMA------ECLKKKRDERP 263
Query: 329 TMVQVAKQLRQLHKSI 344
Q+ + L +S+
Sbjct: 264 LFPQILASIELLARSL 279
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q+ H+ +++ T+ PI ++ E++ G+L D + P+G +L + L +A +I
Sbjct: 64 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 118
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A +A++ R + RD++ + IL + K DF ++ I + + + K
Sbjct: 119 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF--P 173
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE ++ KSDV+SFG LL E++T RI Y
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 114/256 (44%), Gaps = 44/256 (17%)
Query: 99 NCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 158
N + + H NIL F+G + +L I V ++ +L +H F M +
Sbjct: 58 NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIE----TKFEMIKLI 112
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
+A + A + YLH ++ I+ RD+K + I E K DF ++ ++ + +
Sbjct: 113 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQF 168
Query: 219 NKVIGTFGFIAPEYMSTANCNE---KSDVYSFGALLLELLTGKRISYSS-------CFEN 268
++ G+ ++APE + + N +SDVY+FG +L EL+TG+ + YS+ F
Sbjct: 169 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINNRDQIIFMV 227
Query: 269 GEEYFLQELVRKSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRP 328
G Y +L + + SN P+ K+L++ +CL K +RP
Sbjct: 228 GRGYLSPDLSK--VRSNC----------------PKAMKRLMA------ECLKKKRDERP 263
Query: 329 TMVQVAKQLRQLHKSI 344
Q+ + L +S+
Sbjct: 264 LFPQILASIELLARSL 279
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 158
I ++H+N++KF G E + L E+ + G L DRI +P+ EP + H+L
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 113
Query: 159 KVAMEIANAVAYLH-VGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
V YLH +G I RDIKP +L E++ K DF ++ ++
Sbjct: 114 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERL 162
Query: 218 NNKVIGTFGFIAPEYMSTANCN-EKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQE 276
NK+ GT ++APE + + E DV+S G +L +L G+ + + ++ +EY +
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE-LPWDQPSDSCQEY--SD 219
Query: 277 LVRKSIESNSFKEI 290
K N +K+I
Sbjct: 220 WKEKKTYLNPWKKI 233
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 158
I ++H+N++KF G E + L E+ + G L DRI +P+ EP + H+L
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 114
Query: 159 KVAMEIANAVAYLH-VGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
V YLH +G I RDIKP +L E++ K DF ++ ++
Sbjct: 115 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERL 163
Query: 218 NNKVIGTFGFIAPEYMSTANCN-EKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQE 276
NK+ GT ++APE + + E DV+S G +L +L G+ + + ++ +EY +
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE-LPWDQPSDSCQEY--SD 220
Query: 277 LVRKSIESNSFKEI 290
K N +K+I
Sbjct: 221 WKEKKTYLNPWKKI 234
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 114/256 (44%), Gaps = 44/256 (17%)
Query: 99 NCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 158
N + + H NIL F+G + +L I V ++ +L +H F M +
Sbjct: 80 NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIE----TKFEMIKLI 134
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
+A + A + YLH ++ I+ RD+K + I E K DF ++ ++ + +
Sbjct: 135 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQF 190
Query: 219 NKVIGTFGFIAPEYMSTANCNE---KSDVYSFGALLLELLTGKRISYSS-------CFEN 268
++ G+ ++APE + + N +SDVY+FG +L EL+TG+ + YS+ F
Sbjct: 191 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINNRDQIIFMV 249
Query: 269 GEEYFLQELVRKSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRP 328
G Y +L + + SN P+ K+L++ +CL K +RP
Sbjct: 250 GRGYLSPDLSK--VRSNC----------------PKAMKRLMA------ECLKKKRDERP 285
Query: 329 TMVQVAKQLRQLHKSI 344
Q+ + L +S+
Sbjct: 286 LFPQILASIELLARSL 301
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q+ H+ +++ T+ PI ++ E++ G+L D + P+G +L + L +A +I
Sbjct: 65 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 119
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A +A++ R + RD++ + IL + K DF ++ I + + + K
Sbjct: 120 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF--P 174
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE ++ KSDV+SFG LL E++T RI Y
Sbjct: 175 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 212
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 158
I ++H+N++KF G E + L E+ + G L DRI +P+ EP + H+L
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 113
Query: 159 KVAMEIANAVAYLH-VGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
V YLH +G I RDIKP +L E++ K DF ++ ++
Sbjct: 114 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERL 162
Query: 218 NNKVIGTFGFIAPEYMSTANCN-EKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQE 276
NK+ GT ++APE + + E DV+S G +L +L G+ + + ++ +EY +
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE-LPWDQPSDSCQEY--SD 219
Query: 277 LVRKSIESNSFKEI 290
K N +K+I
Sbjct: 220 WKEKKTYLNPWKKI 233
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 158
I ++H+N++KF G E + L E+ + G L DRI +P+ EP + H+L
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 114
Query: 159 KVAMEIANAVAYLH-VGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
V YLH +G I RDIKP +L E++ K DF ++ ++
Sbjct: 115 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERL 163
Query: 218 NNKVIGTFGFIAPEYMSTANCN-EKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQE 276
NK+ GT ++APE + + E DV+S G +L +L G+ + + ++ +EY +
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE-LPWDQPSDSCQEY--SD 220
Query: 277 LVRKSIESNSFKEI 290
K N +K+I
Sbjct: 221 WKEKKTYLNPWKKI 234
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 158
I ++H+N++KF G E + L E+ + G L DRI +P+ EP + H+L
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 114
Query: 159 KVAMEIANAVAYLH-VGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
V YLH +G I RDIKP +L E++ K DF ++ ++
Sbjct: 115 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERL 163
Query: 218 NNKVIGTFGFIAPEYMSTANCN-EKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQE 276
NK+ GT ++APE + + E DV+S G +L +L G+ + + ++ +EY +
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE-LPWDQPSDSCQEY--SD 220
Query: 277 LVRKSIESNSFKEI 290
K N +K+I
Sbjct: 221 WKEKKTYLNPWKKI 234
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 158
I ++H+N++KF G E + L E+ + G L DRI +P+ EP + H+L
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 114
Query: 159 KVAMEIANAVAYLH-VGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
V YLH +G I RDIKP +L E++ K DF ++ ++
Sbjct: 115 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERL 163
Query: 218 NNKVIGTFGFIAPEYMSTANCN-EKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQE 276
NK+ GT ++APE + + E DV+S G +L +L G+ + + ++ +EY +
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE-LPWDQPSDSCQEY--SD 220
Query: 277 LVRKSIESNSFKEI 290
K N +K+I
Sbjct: 221 WKEKKTYLNPWKKI 234
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 158
I ++H+N++KF G E + L E+ + G L DRI +P+ EP + H+L
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 113
Query: 159 KVAMEIANAVAYLH-VGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
V YLH +G I RDIKP +L E++ K DF ++ ++
Sbjct: 114 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERL 162
Query: 218 NNKVIGTFGFIAPEYMSTANCN-EKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQE 276
NK+ GT ++APE + + E DV+S G +L +L G+ + + ++ +EY +
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE-LPWDQPSDSCQEY--SD 219
Query: 277 LVRKSIESNSFKEI 290
K N +K+I
Sbjct: 220 WKEKKTYLNPWKKI 233
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q+ H+ +++ T+ PI ++ E++ G+L D + P+G +L + L +A +I
Sbjct: 64 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 118
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A +A++ R + RD++ + IL + K DF ++ I + + + K
Sbjct: 119 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF--P 173
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE ++ KSDV+SFG LL E++T RI Y
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q+ H+ +++ T+ PI ++ E++ G+L D + P+G +L + L +A +I
Sbjct: 73 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 127
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A +A++ R + RD++ + IL + K DF ++ I + + + K
Sbjct: 128 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF--P 182
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE ++ KSDV+SFG LL E++T RI Y
Sbjct: 183 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 220
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q+ H+ +++ T+ PI ++ E++ G+L D + P+G +L + L +A +I
Sbjct: 66 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 120
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A +A++ R + RD++ + IL + K DF ++ I + + + K
Sbjct: 121 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF--P 175
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE ++ KSDV+SFG LL E++T RI Y
Sbjct: 176 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 213
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 158
I ++H+N++KF G E + L E+ + G L DRI +P+ EP + H+L
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 113
Query: 159 KVAMEIANAVAYLH-VGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
V YLH +G I RDIKP +L E++ K DF ++ ++
Sbjct: 114 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERL 162
Query: 218 NNKVIGTFGFIAPEYMSTANCN-EKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQE 276
NK+ GT ++APE + + E DV+S G +L +L G+ + + ++ +EY +
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE-LPWDQPSDSCQEY--SD 219
Query: 277 LVRKSIESNSFKEI 290
K N +K+I
Sbjct: 220 WKEKKTYLNPWKKI 233
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 158
I ++H+N++KF G E + L E+ + G L DRI +P+ EP + H+L
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 113
Query: 159 KVAMEIANAVAYLH-VGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
V YLH +G I RDIKP +L E++ K DF ++ ++
Sbjct: 114 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERL 162
Query: 218 NNKVIGTFGFIAPEYMSTANCN-EKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQE 276
NK+ GT ++APE + + E DV+S G +L +L G+ + + ++ +EY +
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE-LPWDQPSDSCQEY--SD 219
Query: 277 LVRKSIESNSFKEI 290
K N +K+I
Sbjct: 220 WKEKKTYLNPWKKI 233
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 158
I ++H+N++KF G E + L E+ + G L DRI +P+ EP + H+L
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 114
Query: 159 KVAMEIANAVAYLH-VGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
V YLH +G I RDIKP +L E++ K DF ++ ++
Sbjct: 115 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERL 163
Query: 218 NNKVIGTFGFIAPEYMSTANCN-EKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQE 276
NK+ GT ++APE + + E DV+S G +L +L G+ + + ++ +EY +
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE-LPWDQPSDSCQEY--SD 220
Query: 277 LVRKSIESNSFKEI 290
K N +K+I
Sbjct: 221 WKEKKTYLNPWKKI 234
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q+ H+ +++ T+ PI ++ E++ G+L D + P+G +L + L +A +I
Sbjct: 70 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 124
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A +A++ R + RD++ + IL + K DF ++ I + + + K
Sbjct: 125 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF--P 179
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE ++ KSDV+SFG LL E++T RI Y
Sbjct: 180 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 217
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 22/188 (11%)
Query: 81 ISVMKFGGNLNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELP------ILVFEFVAC 134
I VM G+ E N + S H+NI + G ++ P LV EF
Sbjct: 54 IKVMDVTGDEEEEIKQEINMLKKYSH--HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGA 111
Query: 135 GTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQ 194
G++ D I + G+ L+ + + + EI +++LH ++ RDIK +L E
Sbjct: 112 GSVTDLIKNTKGNTLKEEWIAY---ICREILRGLSHLH---QHKVIHRDIKGQNVLLTEN 165
Query: 195 NVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMS-----TANCNEKSDVYSFGA 249
K DF VS + V N IGT ++APE ++ A + KSD++S G
Sbjct: 166 AEVKLVDFGVSAQLDRT---VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGI 222
Query: 250 LLLELLTG 257
+E+ G
Sbjct: 223 TAIEMAEG 230
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q+ H+ +++ T+ PI ++ E++ G+L D + P+G +L + L +A +I
Sbjct: 69 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 123
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A +A++ R + RD++ + IL + K DF ++ I + + + K
Sbjct: 124 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF--P 178
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE ++ KSDV+SFG LL E++T RI Y
Sbjct: 179 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 216
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 17/161 (10%)
Query: 101 IAFASQMSHKNILKFVGCCL---ETELPILVFEFVACGTLADRI--HDPNGSQLEPFLMK 155
I + H++I+K+ GCC E L LV E+V G+L D + H +QL
Sbjct: 67 IDILRTLYHEHIIKYKGCCEDQGEKSLQ-LVMEYVPLGSLRDYLPRHSIGLAQL------ 119
Query: 156 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHV 215
L A +I +AYLH ++ + R++ +L + K DF ++ ++PEG +
Sbjct: 120 --LLFAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 174
Query: 216 NDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE + SDV+SFG L ELLT
Sbjct: 175 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 158
I ++H+N++KF G E + L E+ + G L DRI +P+ EP + H+L
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 114
Query: 159 KVAMEIANAVAYLH-VGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
V YLH +G I RDIKP +L E++ K DF ++ ++
Sbjct: 115 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERL 163
Query: 218 NNKVIGTFGFIAPEYMSTANCN-EKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQE 276
NK+ GT ++APE + + E DV+S G +L +L G+ + + ++ +EY +
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE-LPWDQPSDSCQEY--SD 220
Query: 277 LVRKSIESNSFKEI 290
K N +K+I
Sbjct: 221 WKEKKTYLNPWKKI 234
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 158
I ++H+N++KF G E + L E+ + G L DRI +P+ EP + H+L
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 113
Query: 159 KVAMEIANAVAYLH-VGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
V YLH +G I RDIKP +L E++ K DF ++ ++
Sbjct: 114 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERL 162
Query: 218 NNKVIGTFGFIAPEYMSTANCN-EKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQE 276
NK+ GT ++APE + + E DV+S G +L +L G+ + + ++ +EY +
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE-LPWDQPSDSCQEY--SD 219
Query: 277 LVRKSIESNSFKEI 290
K N +K+I
Sbjct: 220 WKEKKTYLNPWKKI 233
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 44/256 (17%)
Query: 99 NCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 158
N + + H NIL F+G +L I V ++ +L +H F M +
Sbjct: 53 NEVGVLRKTRHVNILLFMGYSTAPQLAI-VTQWCEGSSLYHHLHIIETK----FEMIKLI 107
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
+A + A + YLH ++ I+ RD+K + I E K DF ++ ++ + +
Sbjct: 108 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQF 163
Query: 219 NKVIGTFGFIAPEYMSTANCNE---KSDVYSFGALLLELLTGKRISYSS-------CFEN 268
++ G+ ++APE + + N +SDVY+FG +L EL+TG+ + YS+ F
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINNRDQIIFMV 222
Query: 269 GEEYFLQELVRKSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRP 328
G Y +L + + SN P+ K+L++ +CL K +RP
Sbjct: 223 GRGYLSPDLSK--VRSNC----------------PKAMKRLMA------ECLKKKRDERP 258
Query: 329 TMVQVAKQLRQLHKSI 344
Q+ + L +S+
Sbjct: 259 LFPQILASIELLARSL 274
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q+ H+ +++ T+ PI ++ E++ G+L D + P+G +L + L +A +I
Sbjct: 74 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 128
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A +A++ R + RD++ + IL + K DF ++ I + + + K
Sbjct: 129 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF--P 183
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE ++ KSDV+SFG LL E++T RI Y
Sbjct: 184 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 221
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q+ H+ +++ T+ PI ++ E++ G+L D + P+G +L + L +A +I
Sbjct: 64 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 118
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A +A++ R + RD++ + IL + K DF ++ I + + + K
Sbjct: 119 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF--P 173
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE ++ KSDV+SFG LL E++T RI Y
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q+ H+ +++ T+ PI ++ E++ G+L D + P+G +L + L +A +I
Sbjct: 59 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKLT---INKLLDMAAQI 113
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A +A++ R + RD++ + IL + K DF ++ I + + + K
Sbjct: 114 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF--P 168
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE ++ KSDV+SFG LL E++T RI Y
Sbjct: 169 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 206
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 115/262 (43%), Gaps = 51/262 (19%)
Query: 99 NCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 158
N + + H NIL F+G + +L I V ++ +L +H F M +
Sbjct: 73 NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIE----TKFEMIKLI 127
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
+A + A + YLH ++ I+ RD+K + I E K DF ++ + +
Sbjct: 128 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRW-SGSHQF 183
Query: 219 NKVIGTFGFIAPEYMSTANCNE---KSDVYSFGALLLELLTGKRISYSS-------CFEN 268
++ G+ ++APE + + N +SDVY+FG +L EL+TG+ + YS+ F
Sbjct: 184 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINNRDQIIFMV 242
Query: 269 GEEYFLQELVRKSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRP 328
G Y +L + + SN P+ K+L++ +CL K +RP
Sbjct: 243 GRGYLSPDLSK--VRSNC----------------PKAMKRLMA------ECLKKKRDERP 278
Query: 329 TMVQV-------AKQLRQLHKS 343
Q+ A+ L ++H+S
Sbjct: 279 LFPQILASIELLARSLPKIHRS 300
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLET-ELPI-LVFEFVACGTLADRI--HDPNGSQLEPFLMKH 156
I + H++I+K+ GCC + E + LV E+V G+L D + H +QL
Sbjct: 61 IEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL------- 113
Query: 157 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVN 216
L A +I +AYLH ++ + R + +L + K DF ++ ++PEG +
Sbjct: 114 -LLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 169
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE + SDV+SFG L ELLT
Sbjct: 170 VREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLET-ELPI-LVFEFVACGTLADRI--HDPNGSQLEPFLMKH 156
I + H++I+K+ GCC + E + LV E+V G+L D + H +QL
Sbjct: 62 IEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL------- 114
Query: 157 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVN 216
L A +I +AYLH ++ + R + +L + K DF ++ ++PEG +
Sbjct: 115 -LLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 170
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE + SDV+SFG L ELLT
Sbjct: 171 VREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 115/259 (44%), Gaps = 50/259 (19%)
Query: 99 NCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 158
N + + H NIL F+G + +L I V ++ +L +H F M +
Sbjct: 53 NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETK----FEMIKLI 107
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
+A + A + YLH ++ I+ RD+K + I E K DF ++ K+ + +
Sbjct: 108 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATE----KSRWSGS 160
Query: 219 NK---VIGTFGFIAPEYMSTANCNE---KSDVYSFGALLLELLTGKRISYSS-------C 265
++ + G+ ++APE + + N +SDVY+FG +L EL+TG+ + YS+
Sbjct: 161 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINNRDQII 219
Query: 266 FENGEEYFLQELVRKSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQ 325
F G Y +L + + SN P+ K+L++ +CL K
Sbjct: 220 FMVGRGYLSPDLSK--VRSNC----------------PKAMKRLMA------ECLKKKRD 255
Query: 326 DRPTMVQVAKQLRQLHKSI 344
+RP Q+ + L +S+
Sbjct: 256 ERPLFPQILASIELLARSL 274
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 115/259 (44%), Gaps = 50/259 (19%)
Query: 99 NCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 158
N + + H NIL F+G + +L I V ++ +L +H F M +
Sbjct: 81 NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIE----TKFEMIKLI 135
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
+A + A + YLH ++ I+ RD+K + I E K DF ++ K+ + +
Sbjct: 136 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATE----KSRWSGS 188
Query: 219 NK---VIGTFGFIAPEYMSTANCNE---KSDVYSFGALLLELLTGKRISYSS-------C 265
++ + G+ ++APE + + N +SDVY+FG +L EL+TG+ + YS+
Sbjct: 189 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINNRDQII 247
Query: 266 FENGEEYFLQELVRKSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQ 325
F G Y +L + + SN P+ K+L++ +CL K
Sbjct: 248 FMVGRGYLSPDLSK--VRSNC----------------PKAMKRLMA------ECLKKKRD 283
Query: 326 DRPTMVQVAKQLRQLHKSI 344
+RP Q+ + L +S+
Sbjct: 284 ERPLFPQILASIELLARSL 302
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
S ++H I++ G + + ++ +++ G L + SQ P + A E+
Sbjct: 61 SIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK---SQRFPNPVAKFY--AAEV 115
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A+ YLH S+ I++RD+KP IL + K DF + +P+ + GT
Sbjct: 116 CLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV------TYXLCGT 166
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
+IAPE +ST N+ D +SFG L+ E+L G Y S
Sbjct: 167 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS 206
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q+ H+ +++ T+ PI ++ E++ G+L D + P+G +L + L +A +I
Sbjct: 60 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKLT---INKLLDMAAQI 114
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A +A++ R + R+++ + IL + K DF ++ I + + + K
Sbjct: 115 AEGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF--P 169
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE ++ KSDV+SFG LL E++T RI Y
Sbjct: 170 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 207
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 18/160 (11%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 166
+ H N+LKF+G + + + E++ GTL I S + R+ A +IA+
Sbjct: 64 LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIK----SMDSQYPWSQRVSFAKDIAS 119
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI------PEGKTHVNDNNK 220
+AYLH S I+ RD+ L +E DF ++ + PEG + ++
Sbjct: 120 GMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDR 176
Query: 221 -----VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELL 255
V+G ++APE ++ + +EK DV+SFG +L E++
Sbjct: 177 KKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN------GSQLEPFLMKH 156
+ + H++I+KF G C+E + I+VFE++ G L R H P+ G+
Sbjct: 70 TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQ 129
Query: 157 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVN 216
L +A +IA + YL S+ V RD+ L E + K DF +S + +
Sbjct: 130 MLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDV-----YST 181
Query: 217 DNNKVIG----TFGFIAPEYMSTANCNEKSDVYSFGALLLELLT-GKRISY 262
D +V G ++ PE + +SDV+S G +L E+ T GK+ Y
Sbjct: 182 DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWY 232
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 81/189 (42%), Gaps = 30/189 (15%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQLE--------PFLM 154
+ + H++I++F G C E ++VFE++ G L R H P+ L P +
Sbjct: 98 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157
Query: 155 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTH 214
L VA ++A + YL G V RD+ L + V K DF +S I +
Sbjct: 158 GQLLAVASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDI-----Y 209
Query: 215 VNDNNKVIG----TFGFIAPEYMSTANCNEKSDVYSFGALLLELLT-GKRISYS------ 263
D +V G ++ PE + +SDV+SFG +L E+ T GK+ Y
Sbjct: 210 STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA 269
Query: 264 -SCFENGEE 271
C G E
Sbjct: 270 IDCITQGRE 278
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 22/185 (11%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQLE--------PFLM 154
+ + H++I++F G C E ++VFE++ G L R H P+ L P +
Sbjct: 69 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 128
Query: 155 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTH 214
L VA ++A + YL G V RD+ L + V K DF +S I +
Sbjct: 129 GQLLAVASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDI-YSTDY 184
Query: 215 VNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT-GKRISYS-------SCF 266
+ + ++ PE + +SDV+SFG +L E+ T GK+ Y C
Sbjct: 185 YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI 244
Query: 267 ENGEE 271
G E
Sbjct: 245 TQGRE 249
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 22/185 (11%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQLE--------PFLM 154
+ + H++I++F G C E ++VFE++ G L R H P+ L P +
Sbjct: 75 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 134
Query: 155 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTH 214
L VA ++A + YL G V RD+ L + V K DF +S I +
Sbjct: 135 GQLLAVASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDI-YSTDY 190
Query: 215 VNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT-GKRISYS-------SCF 266
+ + ++ PE + +SDV+SFG +L E+ T GK+ Y C
Sbjct: 191 YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI 250
Query: 267 ENGEE 271
G E
Sbjct: 251 TQGRE 255
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
E+A A+ +LH S I++RD+KP IL E+ K DF +S E H
Sbjct: 135 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLS---KESIDHEKKAYSFC 188
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
GT ++APE ++ + +D +SFG L+ E+LTG
Sbjct: 189 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
E+A A+ +LH S I++RD+KP IL E+ K DF +S E H
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLS---KESIDHEKKAYSFC 187
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
GT ++APE ++ + +D +SFG L+ E+LTG
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 9/158 (5%)
Query: 101 IAFASQMSHKNILKFVGCCLET--ELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 158
I + H+NI+K+ G C E L+ EF+ G+L + + N +++ +K +L
Sbjct: 74 IEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKIN---LKQQL 129
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
K A++I + YL SR V RD+ +L + ++ K DF ++ +I K
Sbjct: 130 KYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVK 186
Query: 219 NKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ + APE + + SDV+SFG L ELLT
Sbjct: 187 DDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
E+A A+ +LH S I++RD+KP IL E+ K DF +S E H
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLS---KESIDHEKKAYSFC 187
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
GT ++APE ++ + +D +SFG L+ E+LTG
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 9/158 (5%)
Query: 101 IAFASQMSHKNILKFVGCCLET--ELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 158
I + H+NI+K+ G C E L+ EF+ G+L + + N +++ +K +L
Sbjct: 62 IEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKIN---LKQQL 117
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
K A++I + YL SR V RD+ +L + ++ K DF ++ +I K
Sbjct: 118 KYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVK 174
Query: 219 NKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ + APE + + SDV+SFG L ELLT
Sbjct: 175 DDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 12/159 (7%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I Q+ H+N++ + C + + LVFEFV L D PNG + K
Sbjct: 75 IKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQ-----KY 129
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
+I N + + H S I+ RDIKP IL + V K DF + ++ +D
Sbjct: 130 LFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE-- 184
Query: 221 VIGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGK 258
+ T + APE + + DV++ G L+ E+ G+
Sbjct: 185 -VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 109/246 (44%), Gaps = 29/246 (11%)
Query: 97 CFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRI-HDPNGSQLEPFLMK 155
C I Q++H N++K+ +E +V E G L+ I H +L P +
Sbjct: 79 CIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIP--ER 136
Query: 156 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHV 215
K +++ +A+ ++H SR ++ RDIKP+ + V K D + T
Sbjct: 137 TVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA 193
Query: 216 NDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQ 275
+ ++GT +++PE + N KSD++S G LL E+ + Y G++ L
Sbjct: 194 H---SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY------GDKMNLY 244
Query: 276 ELVRKSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAK 335
L +K IE + P + + + E+ +QL++ C++ + RP + V
Sbjct: 245 SLCKK-IEQCDY-----PPLPSDH--YSEELRQLVNM------CINPDPEKRPDVTYVYD 290
Query: 336 QLRQLH 341
+++H
Sbjct: 291 VAKRMH 296
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 22/201 (10%)
Query: 74 GFLQDRPISVMKFGGNLNSEEYCCFNCIAFASQMS-------HKNILKFVGCCLETELPI 126
G +D+P V K + + + S+M HKNI+ +G C +
Sbjct: 40 GLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLY 99
Query: 127 LVFEFVACGTLADRI-----------HDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGF 175
++ E+ + G L + + ++P+ + E K + A ++A + YL
Sbjct: 100 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---A 156
Query: 176 SRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMST 235
S+ + RD+ +L E NV K DF ++ I + N + ++APE +
Sbjct: 157 SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL-PVKWMAPEALFD 215
Query: 236 ANCNEKSDVYSFGALLLELLT 256
+SDV+SFG LL E+ T
Sbjct: 216 RIYTHQSDVWSFGVLLWEIFT 236
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 28/204 (13%)
Query: 74 GFLQDRPISVMKFGGNLNSEEYCCFNCIAFASQMS-------HKNILKFVGCCLETELPI 126
G +D+P V K + + + S+M HKNI+ +G C +
Sbjct: 51 GLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLY 110
Query: 127 LVFEFVACGTLADRIH-----------DPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGF 175
++ E+ + G L + + +P+ + E K + A ++A + YL
Sbjct: 111 VIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---A 167
Query: 176 SRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIG---TFGFIAPEY 232
S+ + RD+ +L E NV K DF ++ I H++ K ++APE
Sbjct: 168 SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDXXKKTTNGRLPVKWMAPEA 223
Query: 233 MSTANCNEKSDVYSFGALLLELLT 256
+ +SDV+SFG LL E+ T
Sbjct: 224 LFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 22/201 (10%)
Query: 74 GFLQDRPISVMKFGGNLNSEEYCCFNCIAFASQMS-------HKNILKFVGCCLETELPI 126
G +D+P V K + + + S+M HKNI+ +G C +
Sbjct: 43 GLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLY 102
Query: 127 LVFEFVACGTLADRI-----------HDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGF 175
++ E+ + G L + + ++P+ + E K + A ++A + YL
Sbjct: 103 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---A 159
Query: 176 SRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMST 235
S+ + RD+ +L E NV K DF ++ I + N + ++APE +
Sbjct: 160 SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL-PVKWMAPEALFD 218
Query: 236 ANCNEKSDVYSFGALLLELLT 256
+SDV+SFG LL E+ T
Sbjct: 219 RIYTHQSDVWSFGVLLWEIFT 239
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 11/157 (7%)
Query: 107 MSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
+ H ++K T+ PI ++ EF+A G+L D + GS+ +P + + + +IA
Sbjct: 67 LQHDKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSK-QP--LPKLIDFSAQIA 121
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+A++ R + RD++ + IL V K DF ++ I + + + K
Sbjct: 122 EGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF--PI 176
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE ++ + KSDV+SFG LL+E++T RI Y
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 213
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 22/201 (10%)
Query: 74 GFLQDRPISVMKFGGNLNSEEYCCFNCIAFASQMS-------HKNILKFVGCCLETELPI 126
G +D+P V K + + + S+M HKNI+ +G C +
Sbjct: 44 GLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLY 103
Query: 127 LVFEFVACGTLADRI-----------HDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGF 175
++ E+ + G L + + ++P+ + E K + A ++A + YL
Sbjct: 104 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---A 160
Query: 176 SRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMST 235
S+ + RD+ +L E NV K DF ++ I + N + ++APE +
Sbjct: 161 SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL-PVKWMAPEALFD 219
Query: 236 ANCNEKSDVYSFGALLLELLT 256
+SDV+SFG LL E+ T
Sbjct: 220 RIYTHQSDVWSFGVLLWEIFT 240
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 11/157 (7%)
Query: 107 MSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
+ H ++K T+ PI ++ EF+A G+L D + GS+ +P + + + +IA
Sbjct: 240 LQHDKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSK-QP--LPKLIDFSAQIA 294
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+A++ R + RD++ + IL V K DF ++ I + + + K
Sbjct: 295 EGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF--PI 349
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE ++ + KSDV+SFG LL+E++T RI Y
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 386
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 22/201 (10%)
Query: 74 GFLQDRPISVMKFGGNLNSEEYCCFNCIAFASQMS-------HKNILKFVGCCLETELPI 126
G +D+P V K + + + S+M HKNI+ +G C +
Sbjct: 51 GLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLY 110
Query: 127 LVFEFVACGTLADRI-----------HDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGF 175
++ E+ + G L + + ++P+ + E K + A ++A + YL
Sbjct: 111 VIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---A 167
Query: 176 SRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMST 235
S+ + RD+ +L E NV K DF ++ I + N + ++APE +
Sbjct: 168 SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL-PVKWMAPEALFD 226
Query: 236 ANCNEKSDVYSFGALLLELLT 256
+SDV+SFG LL E+ T
Sbjct: 227 RIYTHQSDVWSFGVLLWEIFT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 22/201 (10%)
Query: 74 GFLQDRPISVMKFGGNLNSEEYCCFNCIAFASQMS-------HKNILKFVGCCLETELPI 126
G +D+P V K + + + S+M HKNI+ +G C +
Sbjct: 51 GLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLY 110
Query: 127 LVFEFVACGTLADRI-----------HDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGF 175
++ E+ + G L + + ++P+ + E K + A ++A + YL
Sbjct: 111 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---A 167
Query: 176 SRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMST 235
S+ + RD+ +L E NV K DF ++ I + N + ++APE +
Sbjct: 168 SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL-PVKWMAPEALFD 226
Query: 236 ANCNEKSDVYSFGALLLELLT 256
+SDV+SFG LL E+ T
Sbjct: 227 RIYTHQSDVWSFGVLLWEIFT 247
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 22/201 (10%)
Query: 74 GFLQDRPISVMKFGGNLNSEEYCCFNCIAFASQMS-------HKNILKFVGCCLETELPI 126
G +D+P V K + + + S+M HKNI+ +G C +
Sbjct: 36 GLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLY 95
Query: 127 LVFEFVACGTLADRI-----------HDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGF 175
++ E+ + G L + + ++P+ + E K + A ++A + YL
Sbjct: 96 VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---A 152
Query: 176 SRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMST 235
S+ + RD+ +L E NV K DF ++ I + N + ++APE +
Sbjct: 153 SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL-PVKWMAPEALFD 211
Query: 236 ANCNEKSDVYSFGALLLELLT 256
+SDV+SFG LL E+ T
Sbjct: 212 RIYTHQSDVWSFGVLLWEIFT 232
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I SQ + K+ G L+ ++ E++ G+ D + + F + LK
Sbjct: 72 ITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLR---AGPFDEFQIATMLK- 127
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
EI + YLH S + RDIK + +L EQ K DF V+ + + + N
Sbjct: 128 --EILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK---RNT 179
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+GT ++APE + + + K+D++S G +EL G+
Sbjct: 180 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 13/178 (7%)
Query: 88 GNLNSEEYCCFNCIAFASQMSHK-NILKFVGCCLETELPILVF-EFVACGTLADRIHD-- 143
G +SE + + + H N++ +G C + P++V EF G L+ +
Sbjct: 68 GATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 127
Query: 144 ----PNGSQLEPFL-MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAK 198
P + FL ++H + + ++A + +L SR + RD+ IL E+NV K
Sbjct: 128 NEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVK 184
Query: 199 FFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
DF ++ I + +V + + ++APE + +SDV+SFG LL E+ +
Sbjct: 185 IXDFGLARDIYKDPDYVRKGDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C ++ EF+ G L D + + N ++ ++ L +A
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMA 117
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + RD+ L E ++ K DF +S + G T+
Sbjct: 118 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAK 173
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 174 F-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 22/201 (10%)
Query: 74 GFLQDRPISVMKFGGNLNSEEYCCFNCIAFASQMS-------HKNILKFVGCCLETELPI 126
G +D+P V K + + + S+M HKNI+ +G C +
Sbjct: 51 GLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLY 110
Query: 127 LVFEFVACGTLADRI-----------HDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGF 175
++ E+ + G L + + ++P+ + E K + A ++A + YL
Sbjct: 111 VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---A 167
Query: 176 SRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMST 235
S+ + RD+ +L E NV K DF ++ I + N + ++APE +
Sbjct: 168 SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL-PVKWMAPEALFD 226
Query: 236 ANCNEKSDVYSFGALLLELLT 256
+SDV+SFG LL E+ T
Sbjct: 227 RIYTHQSDVWSFGVLLWEIFT 247
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C ++ EF+ G L D + + N ++ ++ L +A
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMA 117
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + RD+ L E ++ K DF +S + G T+
Sbjct: 118 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAK 173
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 174 F-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 41/240 (17%)
Query: 108 SHKNILKFVGCCLETE-LPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 162
SH N+L +G CL +E P++V ++ G L + I H+P L F +
Sbjct: 81 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 132
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
++A + YL S+ V RD+ + E+ K DF ++ + + K + + +NK
Sbjct: 133 QVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD-KEYYSVHNKTG 188
Query: 223 GTF--GFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRK 280
++A E + T KSDV+SFG LL EL+T Y
Sbjct: 189 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP----------------- 231
Query: 281 SIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQL 340
+ N+F +I ++ G L PE L E+ +KC + RP+ ++ ++ +
Sbjct: 232 --DVNTF-DITVYLLQGRRLLQPEYCPDPL--YEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 41/240 (17%)
Query: 108 SHKNILKFVGCCLETE-LPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 162
SH N+L +G CL +E P++V ++ G L + I H+P L F +
Sbjct: 84 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 135
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
++A + YL S+ V RD+ + E+ K DF ++ + + K + + +NK
Sbjct: 136 QVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD-KEYYSVHNKTG 191
Query: 223 GTF--GFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRK 280
++A E + T KSDV+SFG LL EL+T Y
Sbjct: 192 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP----------------- 234
Query: 281 SIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQL 340
+ N+F +I ++ G L PE L E+ +KC + RP+ ++ ++ +
Sbjct: 235 --DVNTF-DITVYLLQGRRLLQPEYCPDPL--YEVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 22/201 (10%)
Query: 74 GFLQDRPISVMKFGGNLNSEEYCCFNCIAFASQMS-------HKNILKFVGCCLETELPI 126
G +D+P V K + + + S+M HKNI+ +G C +
Sbjct: 92 GLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLY 151
Query: 127 LVFEFVACGTLADRI-----------HDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGF 175
++ E+ + G L + + ++P+ + E K + A ++A + YL
Sbjct: 152 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA--- 208
Query: 176 SRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMST 235
S+ + RD+ +L E NV K DF ++ I + N + ++APE +
Sbjct: 209 SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL-PVKWMAPEALFD 267
Query: 236 ANCNEKSDVYSFGALLLELLT 256
+SDV+SFG LL E+ T
Sbjct: 268 RIYTHQSDVWSFGVLLWEIFT 288
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 41/240 (17%)
Query: 108 SHKNILKFVGCCLETE-LPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 162
SH N+L +G CL +E P++V ++ G L + I H+P L F +
Sbjct: 86 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 137
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
++A + YL S+ V RD+ + E+ K DF ++ + + K + + +NK
Sbjct: 138 QVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD-KEYYSVHNKTG 193
Query: 223 GTF--GFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRK 280
++A E + T KSDV+SFG LL EL+T Y
Sbjct: 194 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP----------------- 236
Query: 281 SIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQL 340
+ N+F +I ++ G L PE L E+ +KC + RP+ ++ ++ +
Sbjct: 237 --DVNTF-DITVYLLQGRRLLQPEYCPDPL--YEVMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 41/240 (17%)
Query: 108 SHKNILKFVGCCLETE-LPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 162
SH N+L +G CL +E P++V ++ G L + I H+P L F +
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 138
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
++A + YL S+ V RD+ + E+ K DF ++ + + K + + +NK
Sbjct: 139 QVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD-KEYYSVHNKTG 194
Query: 223 GTF--GFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRK 280
++A E + T KSDV+SFG LL EL+T Y
Sbjct: 195 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP----------------- 237
Query: 281 SIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQL 340
+ N+F +I ++ G L PE L E+ +KC + RP+ ++ ++ +
Sbjct: 238 --DVNTF-DITVYLLQGRRLLQPEYCPDPL--YEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 41/240 (17%)
Query: 108 SHKNILKFVGCCLETE-LPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 162
SH N+L +G CL +E P++V ++ G L + I H+P L F +
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 139
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
++A + YL S+ V RD+ + E+ K DF ++ + + K + + +NK
Sbjct: 140 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD-KEYYSVHNKTG 195
Query: 223 GTF--GFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRK 280
++A E + T KSDV+SFG LL EL+T Y
Sbjct: 196 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP----------------- 238
Query: 281 SIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQL 340
+ N+F +I ++ G L PE L E+ +KC + RP+ ++ ++ +
Sbjct: 239 --DVNTF-DITVYLLQGRRLLQPEYCPDPL--YEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 41/240 (17%)
Query: 108 SHKNILKFVGCCLETE-LPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 162
SH N+L +G CL +E P++V ++ G L + I H+P L F +
Sbjct: 108 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 159
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
++A + YL S+ V RD+ + E+ K DF ++ + + K + + +NK
Sbjct: 160 QVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD-KEYYSVHNKTG 215
Query: 223 GTFG--FIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRK 280
++A E + T KSDV+SFG LL EL+T Y
Sbjct: 216 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP----------------- 258
Query: 281 SIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQL 340
+ N+F +I ++ G L PE L E+ +KC + RP+ ++ ++ +
Sbjct: 259 --DVNTF-DITVYLLQGRRLLQPEYCPDPL--YEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C ++ EF+ G L D + + N ++ ++ L +A
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL---LYMA 122
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + RD+ L E ++ K DF +S + G T+
Sbjct: 123 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAK 178
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 179 F-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 41/240 (17%)
Query: 108 SHKNILKFVGCCLETE-LPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 162
SH N+L +G CL +E P++V ++ G L + I H+P L F +
Sbjct: 107 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 158
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
++A + YL S+ V RD+ + E+ K DF ++ + + K + + +NK
Sbjct: 159 QVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD-KEYYSVHNKTG 214
Query: 223 GTF--GFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRK 280
++A E + T KSDV+SFG LL EL+T Y
Sbjct: 215 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP----------------- 257
Query: 281 SIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQL 340
+ N+F +I ++ G L PE L E+ +KC + RP+ ++ ++ +
Sbjct: 258 --DVNTF-DITVYLLQGRRLLQPEYCPDPL--YEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 41/240 (17%)
Query: 108 SHKNILKFVGCCLETE-LPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 162
SH N+L +G CL +E P++V ++ G L + I H+P L F +
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 140
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
++A + YL S+ V RD+ + E+ K DF ++ + + K + + +NK
Sbjct: 141 QVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD-KEYYSVHNKTG 196
Query: 223 GTF--GFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRK 280
++A E + T KSDV+SFG LL EL+T Y
Sbjct: 197 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP----------------- 239
Query: 281 SIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQL 340
+ N+F +I ++ G L PE L E+ +KC + RP+ ++ ++ +
Sbjct: 240 --DVNTF-DITVYLLQGRRLLQPEYCPDPL--YEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 41/240 (17%)
Query: 108 SHKNILKFVGCCLETE-LPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 162
SH N+L +G CL +E P++V ++ G L + I H+P L F +
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 140
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
++A + YL S+ V RD+ + E+ K DF ++ + + K + + +NK
Sbjct: 141 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD-KEYYSVHNKTG 196
Query: 223 GTF--GFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRK 280
++A E + T KSDV+SFG LL EL+T Y
Sbjct: 197 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP----------------- 239
Query: 281 SIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQL 340
+ N+F +I ++ G L PE L E+ +KC + RP+ ++ ++ +
Sbjct: 240 --DVNTF-DITVYLLQGRRLLQPEYCPDPL--YEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
Q SH NI++ +G C + + +V E V G + G++L +K L++ + A
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT-EGARLR---VKTLLQMVGDAA 223
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+ YL S+ + RD+ L E+NV K DF +S +G + + +
Sbjct: 224 AGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQV-PV 279
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + +SDV+SFG LL E +
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C ++ EF+ G L D + + N ++ ++ L +A
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMA 117
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + RD+ L E ++ K DF +S + G T+
Sbjct: 118 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAK 173
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 174 F-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C ++ EF+ G L D + + N ++ ++ L +A
Sbjct: 74 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMA 130
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + RD+ L E ++ K DF +S + G T+
Sbjct: 131 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAK 186
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 187 F-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 101/256 (39%), Gaps = 47/256 (18%)
Query: 81 ISVMKFGGNLNSEEYC-CFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD 139
I M + G ++E++ + F ++ H N +++ GC L LV E+ G+ +D
Sbjct: 45 IKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY-CLGSASD 103
Query: 140 --RIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVA 197
+H ++E + H +AYLH S ++ RD+K IL E +
Sbjct: 104 LLEVHKKPLQEVEIAAVTH------GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLV 154
Query: 198 KFFDF-CVSISIPEGKTHVNDNNKVIGTFGFIAPEY---MSTANCNEKSDVYSFGALLLE 253
K DF SI P N +GT ++APE M + K DV+S G +E
Sbjct: 155 KLGDFGSASIMAPA--------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 206
Query: 254 LLTGKRISYSSCFENGEEYFLQELVRKSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYT 313
L K ++ + + Q ES + + G W E + +
Sbjct: 207 LAERKPPLFNMNAMSALYHIAQN------ESPAL----------QSGHWSEYFRNFVD-- 248
Query: 314 ELAIKCLSKSEQDRPT 329
CL K QDRPT
Sbjct: 249 ----SCLQKIPQDRPT 260
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C ++ EF+ G L D + + N ++ ++ L +A
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMA 117
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + RD+ L E ++ K DF +S + G T+
Sbjct: 118 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAK 173
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 174 F-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 17/159 (10%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRI--HDPNGSQLEPFLMKHRL 158
I S + H NIL+ + + L+ EF G L + H Q M+
Sbjct: 66 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME--- 122
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
E+A+A+ Y H R ++ RDIKP +L + K DF S+ P +
Sbjct: 123 ----ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-----R 170
Query: 219 NKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ GT ++ PE + +EK D++ G L E L G
Sbjct: 171 RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 17/159 (10%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRI--HDPNGSQLEPFLMKHRL 158
I S + H NIL+ + + L+ EF G L + H Q M+
Sbjct: 65 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME--- 121
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
E+A+A+ Y H R ++ RDIKP +L + K DF S+ P +
Sbjct: 122 ----ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-----R 169
Query: 219 NKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ GT ++ PE + +EK D++ G L E L G
Sbjct: 170 RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C ++ EF+ G L D + + N ++ ++ L +A
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMA 122
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + RD+ L E ++ K DF +S + G T+
Sbjct: 123 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAK 178
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 179 F-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 17/159 (10%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRI--HDPNGSQLEPFLMKHRL 158
I S + H NIL+ + + L+ EF G L + H Q M+
Sbjct: 65 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME--- 121
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
E+A+A+ Y H R ++ RDIKP +L + K DF S+ P +
Sbjct: 122 ----ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-----R 169
Query: 219 NKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ GT ++ PE + +EK D++ G L E L G
Sbjct: 170 RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 166
+ H +++ E ++ E++A G+L D + G ++ L+ + + +IA
Sbjct: 65 LQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKV---LLPKLIDFSAQIAE 121
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFG 226
+AY+ + + RD++ + +L E + K DF ++ I + + + K
Sbjct: 122 GMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF--PIK 176
Query: 227 FIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE ++ KSDV+SFG LL E++T +I Y
Sbjct: 177 WTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPY 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C ++ EF+ G L D + + N ++ ++ L +A
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMA 119
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + RD+ L E ++ K DF +S + G T+
Sbjct: 120 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAK 175
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 176 F-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 101/256 (39%), Gaps = 47/256 (18%)
Query: 81 ISVMKFGGNLNSEEYC-CFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD 139
I M + G ++E++ + F ++ H N +++ GC L LV E+ G+ +D
Sbjct: 84 IKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY-CLGSASD 142
Query: 140 --RIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVA 197
+H ++E + H +AYLH S ++ RD+K IL E +
Sbjct: 143 LLEVHKKPLQEVEIAAVTH------GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLV 193
Query: 198 KFFDF-CVSISIPEGKTHVNDNNKVIGTFGFIAPEY---MSTANCNEKSDVYSFGALLLE 253
K DF SI P N +GT ++APE M + K DV+S G +E
Sbjct: 194 KLGDFGSASIMAPA--------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 245
Query: 254 LLTGKRISYSSCFENGEEYFLQELVRKSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYT 313
L K ++ + + Q ES + + G W E + +
Sbjct: 246 LAERKPPLFNMNAMSALYHIAQN------ESPAL----------QSGHWSEYFRNFVD-- 287
Query: 314 ELAIKCLSKSEQDRPT 329
CL K QDRPT
Sbjct: 288 ----SCLQKIPQDRPT 299
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C ++ EF+ G L D + + N ++ ++ L +A
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMA 122
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + RD+ L E ++ K DF +S + G T+
Sbjct: 123 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAK 178
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 179 F-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C ++ EF+ G L D + + N ++ ++ L +A
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMA 117
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + RD+ L E ++ K DF +S + G T+
Sbjct: 118 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAK 173
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 174 F-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 16/180 (8%)
Query: 81 ISVMKFGGNLNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADR 140
++V K FN + H N++ L + +V EF+ G L D
Sbjct: 73 VAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDI 132
Query: 141 IHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKF- 199
+ ++ + V + + A++YLH ++ ++ RDIK +IL K
Sbjct: 133 VTHTRMNE------EQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLS 183
Query: 200 -FDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
F FC +S V ++GT ++APE +S + D++S G +++E++ G+
Sbjct: 184 DFGFCAQVS-----KEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 238
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C ++ EF+ G L D + + N ++ ++ L +A
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMA 119
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + RD+ L E ++ K DF +S + G T+
Sbjct: 120 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAK 175
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 176 F-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
Q SH NI++ +G C + + +V E V G + G++L +K L++ + A
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT-EGARLR---VKTLLQMVGDAA 223
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+ YL S+ + RD+ L E+NV K DF +S +G + + +
Sbjct: 224 AGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQV-PV 279
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + +SDV+SFG LL E +
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C ++ EF+ G L D + + N ++ ++ L +A
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMA 115
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + RD+ L E ++ K DF +S + + K
Sbjct: 116 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 172
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 173 --PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C ++ EF+ G L D + + N ++ ++ L +A
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL---LYMA 118
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + RD+ L E ++ K DF +S + + K
Sbjct: 119 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 175
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 176 --PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C ++ EF+ G L D + + N ++ ++ L +A
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMA 118
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + RD+ L E ++ K DF +S + G T+
Sbjct: 119 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAK 174
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 175 F-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C ++ EF+ G L D + + N ++ ++ L +A
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMA 117
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + RD+ L E ++ K DF +S + G T+
Sbjct: 118 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAK 173
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 174 F-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 15/159 (9%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 157
HKNI+ +G C + ++ E+ + G L + R P G + E K
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
+ ++A + YL S+ + RD+ +L E NV K DF ++ I + N
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT 216
Query: 218 NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
N + ++APE + +SDV+SFG L+ E+ T
Sbjct: 217 TNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C ++ EF+ G L D + + N ++ ++ L +A
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMA 119
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + RD+ L E ++ K DF +S + G T+
Sbjct: 120 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAK 175
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 176 F-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C ++ EF+ G L D + + N ++ ++ L +A
Sbjct: 65 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMA 121
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + RD+ L E ++ K DF +S + G T+
Sbjct: 122 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAK 177
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 178 F-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C ++ EF+ G L D + + N ++ ++ L +A
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMA 122
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + RD+ L E ++ K DF +S + G T+
Sbjct: 123 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAK 178
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 179 F-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C ++ EF+ G L D + + N ++ ++ L +A
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMA 115
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + RD+ L E ++ K DF +S + + K
Sbjct: 116 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 172
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 173 --PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 25/166 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELP--ILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 157
I + H NI+K+ G C L+ E++ G+L D +L KH+
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 112
Query: 158 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPE 210
L+ +I + YL ++ + RD+ IL + +N K DF ++ +P+
Sbjct: 113 RIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 169
Query: 211 GKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
K + APE ++ + + SDV+SFG +L EL T
Sbjct: 170 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 25/166 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELP--ILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 157
I + H NI+K+ G C L+ E++ G+L D +L KH+
Sbjct: 60 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 107
Query: 158 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPE 210
L+ +I + YL G R + RD+ IL + +N K DF ++ +P+
Sbjct: 108 RIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 164
Query: 211 GKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
K + APE ++ + + SDV+SFG +L EL T
Sbjct: 165 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 25/166 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELP--ILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 157
I + H NI+K+ G C L+ E++ G+L D +L KH+
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 109
Query: 158 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPE 210
L+ +I + YL G R + RD+ IL + +N K DF ++ +P+
Sbjct: 110 RIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166
Query: 211 GKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
K + APE ++ + + SDV+SFG +L EL T
Sbjct: 167 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 25/166 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELP--ILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 157
I + H NI+K+ G C L+ E++ G+L D +L KH+
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 109
Query: 158 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPE 210
L+ +I + YL ++ + RD+ IL + +N K DF ++ +P+
Sbjct: 110 RIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166
Query: 211 GKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
K + APE ++ + + SDV+SFG +L EL T
Sbjct: 167 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 25/166 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELP--ILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 157
I + H NI+K+ G C L+ E++ G+L D +L KH+
Sbjct: 80 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 127
Query: 158 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPE 210
L+ +I + YL ++ + RD+ IL + +N K DF ++ +P+
Sbjct: 128 RIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 184
Query: 211 GKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
K + APE ++ + + SDV+SFG +L EL T
Sbjct: 185 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 25/166 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELP--ILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 157
I + H NI+K+ G C L+ E++ G+L D +L KH+
Sbjct: 67 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 114
Query: 158 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPE 210
L+ +I + YL ++ + RD+ IL + +N K DF ++ +P+
Sbjct: 115 RIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 171
Query: 211 GKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
K + APE ++ + + SDV+SFG +L EL T
Sbjct: 172 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 25/166 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELP--ILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 157
I + H NI+K+ G C L+ E++ G+L D +L KH+
Sbjct: 61 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 108
Query: 158 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPE 210
L+ +I + YL G R + RD+ IL + +N K DF ++ +P+
Sbjct: 109 RIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 165
Query: 211 GKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
K + APE ++ + + SDV+SFG +L EL T
Sbjct: 166 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 25/166 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELP--ILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 157
I + H NI+K+ G C L+ E++ G+L D +L KH+
Sbjct: 69 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 116
Query: 158 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPE 210
L+ +I + YL ++ + RD+ IL + +N K DF ++ +P+
Sbjct: 117 RIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 173
Query: 211 GKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
K + APE ++ + + SDV+SFG +L EL T
Sbjct: 174 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 41/240 (17%)
Query: 108 SHKNILKFVGCCLETE-LPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 162
SH N+L +G CL +E P++V ++ G L + I H+P L F +
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 139
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
++A + YL S+ V RD+ + E+ K DF ++ + + K + +NK
Sbjct: 140 QVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD-KEXXSVHNKTG 195
Query: 223 GTF--GFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRK 280
++A E + T KSDV+SFG LL EL+T Y
Sbjct: 196 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP----------------- 238
Query: 281 SIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQL 340
+ N+F +I ++ G L PE L E+ +KC + RP+ ++ ++ +
Sbjct: 239 --DVNTF-DITVYLLQGRRLLQPEYCPDPL--YEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 25/166 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELP--ILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 157
I + H NI+K+ G C L+ E++ G+L D +L KH+
Sbjct: 68 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 115
Query: 158 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPE 210
L+ +I + YL ++ + RD+ IL + +N K DF ++ +P+
Sbjct: 116 RIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 172
Query: 211 GKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
K + APE ++ + + SDV+SFG +L EL T
Sbjct: 173 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
++ H+ +++ +E PI +V E+++ G+L D + G L + + +A +I
Sbjct: 59 KLRHEKLVQLYAVV--SEEPIXIVTEYMSKGSLLDFLKGETGKYLR---LPQLVDMAAQI 113
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A+ +AY+ V RD++ + IL E V K DF ++ I + + K
Sbjct: 114 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF--P 168
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
+ APE KSDV+SFG LL EL T R+ Y
Sbjct: 169 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 208
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 25/166 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELP--ILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 157
I + H NI+K+ G C L+ E++ G+L D +L KH+
Sbjct: 93 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 140
Query: 158 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPE 210
L+ +I + YL ++ + RD+ IL + +N K DF ++ +P+
Sbjct: 141 RIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197
Query: 211 GKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
K + APE ++ + + SDV+SFG +L EL T
Sbjct: 198 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 25/166 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELP--ILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 157
I + H NI+K+ G C L+ E++ G+L D +L KH+
Sbjct: 80 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 127
Query: 158 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPE 210
L+ +I + YL ++ + RD+ IL + +N K DF ++ +P+
Sbjct: 128 RIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 184
Query: 211 GKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
K + APE ++ + + SDV+SFG +L EL T
Sbjct: 185 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 76/156 (48%), Gaps = 8/156 (5%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 166
+ H +++ + E ++ EF+A G+L D + G ++ L+ + + +IA
Sbjct: 64 LQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKV---LLPKLIDFSAQIAE 120
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFG 226
+AY+ + + RD++ + +L E + K DF ++ I + + + K
Sbjct: 121 GMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF--PIK 175
Query: 227 FIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE ++ KS+V+SFG LL E++T +I Y
Sbjct: 176 WTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPY 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 25/166 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELP--ILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 157
I + H NI+K+ G C L+ E++ G+L D +L KH+
Sbjct: 66 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 113
Query: 158 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPE 210
L+ +I + YL G R + RD+ IL + +N K DF ++ +P+
Sbjct: 114 RIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 170
Query: 211 GKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
K + APE ++ + + SDV+SFG +L EL T
Sbjct: 171 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 109 HKNILKFVGCCLETELPILVF-EFVACGTLADRIHD------PNGSQLEPFL-MKHRLKV 160
H N++ +G C + P++V EF G L+ + P + FL ++H +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
+ ++A + +L SR + RD+ IL E+NV K DF ++ I + +V +
Sbjct: 150 SFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ ++APE + +SDV+SFG LL E+ +
Sbjct: 207 RL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
A EI + LH IV+RD+KP IL + + D +++ +PEG+T
Sbjct: 292 AAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT----IKG 344
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+GT G++APE + D ++ G LL E++ G+
Sbjct: 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
E+A + +LH S I++RD+KP IL E+ K DF +S E H
Sbjct: 138 ELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLS---KEAIDHEKKAYSFC 191
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
GT ++APE ++ + +D +S+G L+ E+LTG
Sbjct: 192 GTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV-SISIPEGKTHVNDNNKV 221
EI+ A+ +LH + I++RD+KP I+ Q K DF + SI +G +
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV----THTF 181
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
GT ++APE + + N D +S GAL+ ++LTG
Sbjct: 182 CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 103 FASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM 162
+A+ + +N +K + + + E+ GTL D IH N +Q ++
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR----DEYWRLFR 123
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI----------PEGK 212
+I A++Y+H S+ I+ RD+KP I E K DF ++ ++ +
Sbjct: 124 QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 213 THVNDN-NKVIGTFGFIAPEYMS-TANCNEKSDVYSFGALLLELL 255
+DN IGT ++A E + T + NEK D+YS G + E++
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV-SISIPEGKTHVNDNNKV 221
EI+ A+ +LH + I++RD+KP I+ Q K DF + SI +G +
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV----THXF 181
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
GT ++APE + + N D +S GAL+ ++LTG
Sbjct: 182 CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
++ H+ +++ +E PI +V E+++ G+L D + G L + + +A +I
Sbjct: 69 KLRHEKLVQLYAVV--SEEPIYIVIEYMSKGSLLDFLKGEMGKYLR---LPQLVDMAAQI 123
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A+ +AY+ V RD++ + IL E V K DF ++ I + + K
Sbjct: 124 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF--P 178
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
+ APE KSDV+SFG LL EL T R+ Y
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C ++ EF+ G L D + + N ++ ++ L +A
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMA 122
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + RD+ L E ++ K DF +S + + K
Sbjct: 123 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 179
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 180 --PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 23/167 (13%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQL---EP------FL 153
+ + H++I+KF G C + + I+VFE++ G L R H P+ L +P
Sbjct: 72 TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 154 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKT 213
+ L +A +IA+ + YL S+ V RD+ L + K DF +S +
Sbjct: 132 LSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDV----- 183
Query: 214 HVNDNNKVIG----TFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ D +V G ++ PE + +SDV+SFG +L E+ T
Sbjct: 184 YSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
++ H+ +++ +E PI +V E+++ G+L D + G L + + +A +I
Sbjct: 62 KLRHEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGETGKYLR---LPQLVDMAAQI 116
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A+ +AY+ V RD++ + IL E V K DF ++ I + + K
Sbjct: 117 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--P 171
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
+ APE KSDV+SFG LL EL T R+ Y
Sbjct: 172 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 211
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
A EI + LH IV+RD+KP IL + + D +++ +PEG+T
Sbjct: 292 AAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT----IKG 344
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+GT G++APE + D ++ G LL E++ G+
Sbjct: 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C ++ EF+ G L D + + N ++ ++ L +A
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMA 115
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + RD+ L E ++ K DF +S + G T
Sbjct: 116 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTFTAHAGAK 171
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 172 F-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 18/164 (10%)
Query: 98 FNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR 157
FN + H N+++ L E ++ EF+ G L D + SQ+ L + +
Sbjct: 90 FNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIV-----SQVR--LNEEQ 142
Query: 158 LKVAME-IANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKF--FDFCVSISIPEGKTH 214
+ E + A+AYLH ++ ++ RDIK +IL K F FC IS
Sbjct: 143 IATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQIS-----KD 194
Query: 215 VNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
V ++GT ++APE +S + + D++S G +++E++ G+
Sbjct: 195 VPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 25/166 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELP--ILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 157
I + H NI+K+ G C L+ E++ G+L D +L KH+
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 109
Query: 158 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPE 210
L+ +I + YL ++ + RD+ IL + +N K DF ++ +P+
Sbjct: 110 RIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166
Query: 211 GKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
K + APE ++ + + SDV+SFG +L EL T
Sbjct: 167 DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
++ H+ +++ +E PI +V E+++ G+L D + G L + + +A +I
Sbjct: 235 KLRHEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGETGKYLR---LPQLVDMAAQI 289
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A+ +AY+ V RD++ + IL E V K DF ++ I + + K
Sbjct: 290 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--P 344
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE KSDV+SFG LL EL T R+ Y
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 382
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C +V E++ G L D + + N ++ ++ L +A
Sbjct: 80 AVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL---LYMA 136
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + RD+ L E +V K DF +S + G T+
Sbjct: 137 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLS-RLMTGDTYTAHAGAK 192
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 193 F-PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
++ H+ +++ +E PI +V E+++ G+L D + G L + + +A +I
Sbjct: 235 KLRHEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGETGKYLR---LPQLVDMAAQI 289
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A+ +AY+ V RD++ + IL E V K DF ++ I + + K
Sbjct: 290 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--P 344
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE KSDV+SFG LL EL T R+ Y
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 382
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
++ H+ +++ +E PI +V E+++ G+L D + G L + + +A +I
Sbjct: 69 KLRHEKLVQLYAVV--SEEPIYIVIEYMSKGSLLDFLKGEMGKYLR---LPQLVDMAAQI 123
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A+ +AY+ V RD++ + IL E V K DF ++ I + + K
Sbjct: 124 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--P 178
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
+ APE KSDV+SFG LL EL T R+ Y
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 25/166 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELP--ILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 157
I + H NI+K+ G C L+ E++ G+L D +L KH+
Sbjct: 63 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 110
Query: 158 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPE 210
L+ +I + YL ++ + R++ IL + +N K DF ++ +P+
Sbjct: 111 RIDHIKLLQYTSQICKGMEYLG---TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQ 167
Query: 211 GKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
K + + APE ++ + + SDV+SFG +L EL T
Sbjct: 168 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 33/225 (14%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
++ H +++ +E PI +V E++ G+L D + D G L+ + + + +A ++
Sbjct: 60 KLKHDKLVQLYAVV--SEEPIYIVTEYMNKGSLLDFLKDGEGRALK---LPNLVDMAAQV 114
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A +AY+ + RD++ + IL + K DF ++ I + + K
Sbjct: 115 AAGMAYIE---RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKF--P 169
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSIES 284
+ APE KSDV+SFG LL EL+T R+ Y
Sbjct: 170 IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM------------------- 210
Query: 285 NSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPT 329
+ +E+++ + G P + +S EL I C K ++RPT
Sbjct: 211 -NNREVLEQVERGYRM--PCPQDCPISLHELMIHCWKKDPEERPT 252
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 78/180 (43%), Gaps = 16/180 (8%)
Query: 81 ISVMKFGGNLNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADR 140
++V K FN + H+N+++ L + +V EF+ G L D
Sbjct: 57 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 116
Query: 141 IHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKF- 199
+ ++ + V + + A++ LH ++ ++ RDIK +IL K
Sbjct: 117 VTHTRMNE------EQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLS 167
Query: 200 -FDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
F FC +S V ++GT ++APE +S + D++S G +++E++ G+
Sbjct: 168 DFGFCAQVS-----KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 222
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 25/166 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELP--ILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 157
I + H NI+K+ G C L+ EF+ G+L + +L KH+
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLRE------------YLQKHKE 112
Query: 158 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPE 210
L+ +I + YL ++ + RD+ IL + +N K DF ++ +P+
Sbjct: 113 RIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 169
Query: 211 GKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
K + APE ++ + + SDV+SFG +L EL T
Sbjct: 170 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
++ H+ +++ +E PI +V E+++ G+L D + G L + + +A +I
Sbjct: 235 KLRHEKLVQLYAVV--SEEPIYIVGEYMSKGSLLDFLKGETGKYLR---LPQLVDMAAQI 289
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A+ +AY+ V RD++ + IL E V K DF ++ I + + K
Sbjct: 290 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--P 344
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE KSDV+SFG LL EL T R+ Y
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 382
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 73/169 (43%), Gaps = 28/169 (16%)
Query: 98 FNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR 157
+N I+ + H NI+K + + LV EF G L E + +H+
Sbjct: 94 YNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL-----------FEQIINRHK 142
Query: 158 L------KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNV---AKFFDFCVSISI 208
+ +I + + YLH IV RDIKP IL + +N K DF +S S
Sbjct: 143 FDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLS-SF 198
Query: 209 PEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ D +GT +IAPE + NEK DV+S G ++ LL G
Sbjct: 199 FSKDYKLRDR---LGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCG 243
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 109 HKNILKFVGCCLETELPILVF-EFVACGTLADRI---------HDPNGSQLEPFLMKHRL 158
H N++ +G C + P++V EF G L+ + + P + ++H +
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
+ ++A + +L SR + RD+ IL E+NV K DF ++ I + V
Sbjct: 152 XYSFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 219 NKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ + ++APE + +SDV+SFG LL E+ +
Sbjct: 209 DARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I SQ I ++ G L++ ++ E++ G+ D + + P + +
Sbjct: 68 ITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL------KPGPLEETYIATI 121
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
EI + YLH S + RDIK + +L EQ K DF V+ + + + N
Sbjct: 122 LREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI---KRNX 175
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+GT ++APE + + + K+D++S G +EL G+
Sbjct: 176 FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 78/180 (43%), Gaps = 16/180 (8%)
Query: 81 ISVMKFGGNLNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADR 140
++V K FN + H+N+++ L + +V EF+ G L D
Sbjct: 59 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 118
Query: 141 IHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKF- 199
+ ++ + V + + A++ LH ++ ++ RDIK +IL K
Sbjct: 119 VTHTRMNE------EQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLS 169
Query: 200 -FDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
F FC +S V ++GT ++APE +S + D++S G +++E++ G+
Sbjct: 170 DFGFCAQVS-----KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 224
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 12/158 (7%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I SQ + K+ G L+ ++ E++ G+ D + +P P +
Sbjct: 56 ITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPG-----PLDETQIATI 109
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
EI + YLH S + RDIK + +L E K DF V+ + + + N
Sbjct: 110 LREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK---RNX 163
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+GT ++APE + + + K+D++S G +EL G+
Sbjct: 164 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 78/180 (43%), Gaps = 16/180 (8%)
Query: 81 ISVMKFGGNLNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADR 140
++V K FN + H+N+++ L + +V EF+ G L D
Sbjct: 102 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 161
Query: 141 IHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKF- 199
+ ++ + V + + A++ LH ++ ++ RDIK +IL K
Sbjct: 162 VTHTRMNE------EQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLS 212
Query: 200 -FDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
F FC +S V ++GT ++APE +S + D++S G +++E++ G+
Sbjct: 213 DFGFCAQVS-----KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 267
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 12/158 (7%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I SQ + K+ G L+ ++ E++ G+ D + +P P +
Sbjct: 56 ITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPG-----PLDETQIATI 109
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
EI + YLH S + RDIK + +L E K DF V+ + + + N
Sbjct: 110 LREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK---RNT 163
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+GT ++APE + + + K+D++S G +EL G+
Sbjct: 164 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 12/158 (7%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I SQ + K+ G L+ ++ E++ G+ D + +P P +
Sbjct: 71 ITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPG-----PLDETQIATI 124
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
EI + YLH S + RDIK + +L E K DF V+ + + + N
Sbjct: 125 LREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK---RNX 178
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+GT ++APE + + + K+D++S G +EL G+
Sbjct: 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 78/180 (43%), Gaps = 16/180 (8%)
Query: 81 ISVMKFGGNLNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADR 140
++V K FN + H+N+++ L + +V EF+ G L D
Sbjct: 48 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 107
Query: 141 IHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKF- 199
+ ++ + V + + A++ LH ++ ++ RDIK +IL K
Sbjct: 108 VTHTRMNE------EQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLS 158
Query: 200 -FDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
F FC +S V ++GT ++APE +S + D++S G +++E++ G+
Sbjct: 159 DFGFCAQVS-----KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 213
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 12/158 (7%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I SQ + K+ G L+ ++ E++ G+ D + +P P +
Sbjct: 76 ITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPG-----PLDETQIATI 129
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
EI + YLH S + RDIK + +L E K DF V+ + + + N
Sbjct: 130 LREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK---RNT 183
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+GT ++APE + + + K+D++S G +EL G+
Sbjct: 184 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 20/182 (10%)
Query: 81 ISVMKFGGNLNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADR 140
++V K FN + H+N+++ L + +V EF+ G L D
Sbjct: 179 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 238
Query: 141 IHDP--NGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAK 198
+ N Q+ V + + A++ LH ++ ++ RDIK +IL K
Sbjct: 239 VTHTRMNEEQIA--------AVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVK 287
Query: 199 F--FDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
F FC +S V ++GT ++APE +S + D++S G +++E++
Sbjct: 288 LSDFGFCAQVS-----KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 342
Query: 257 GK 258
G+
Sbjct: 343 GE 344
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
++ H+ +++ +E PI +V E+++ G+L D + G L + + +A +I
Sbjct: 60 KLRHEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGEMGKYLR---LPQLVDMAAQI 114
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A+ +AY+ V RD++ + IL E V K DF ++ I + + K
Sbjct: 115 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--P 169
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
+ APE KSDV+SFG LL EL T R+ Y
Sbjct: 170 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 209
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
++ H+ +++ +E PI +V E+++ G+L D + G L + + +A +I
Sbjct: 318 KLRHEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGETGKYLR---LPQLVDMAAQI 372
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A+ +AY+ V RD++ + IL E V K DF ++ I + + K
Sbjct: 373 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--P 427
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE KSDV+SFG LL EL T R+ Y
Sbjct: 428 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 465
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 20/111 (18%)
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDF-------------CV 204
L + ++IA AV +LH S+ ++ RD+KPS I F +V K DF V
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 205 SISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELL 255
+P TH +GT +++PE + N + K D++S G +L ELL
Sbjct: 224 LTPMPAYATHXGQ----VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 78/180 (43%), Gaps = 16/180 (8%)
Query: 81 ISVMKFGGNLNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADR 140
++V K FN + H+N+++ L + +V EF+ G L D
Sbjct: 52 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 111
Query: 141 IHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKF- 199
+ ++ + V + + A++ LH ++ ++ RDIK +IL K
Sbjct: 112 VTHTRMNE------EQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLS 162
Query: 200 -FDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
F FC +S V ++GT ++APE +S + D++S G +++E++ G+
Sbjct: 163 DFGFCAQVS-----KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 217
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
++ H+ +++ +E PI +V E+++ G+L D + G L + + +A +I
Sbjct: 58 KLRHEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGEMGKYLR---LPQLVDMAAQI 112
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A+ +AY+ V RD++ + IL E V K DF ++ I + + K
Sbjct: 113 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--P 167
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
+ APE KSDV+SFG LL EL T R+ Y
Sbjct: 168 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 207
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
++ H+ +++ +E PI +V E+++ G+L D + G L + + +A +I
Sbjct: 69 KLRHEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGEMGKYLR---LPQLVDMAAQI 123
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A+ +AY+ V RD++ + IL E V K DF ++ I + + K
Sbjct: 124 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--P 178
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
+ APE KSDV+SFG LL EL T R+ Y
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 90 LNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQL 149
L +E N IA ++ H+NI+ LV + V+ G L DRI +
Sbjct: 60 LKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGF--- 116
Query: 150 EPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNV-AKFFDFCVSISI 208
+ K + ++ +AV YLH IV RD+KP +L+ Q+ +K +S
Sbjct: 117 --YTEKDASTLIRQVLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK 171
Query: 209 PEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFEN 268
EGK V + GT G++APE ++ ++ D +S G + LL G Y ++
Sbjct: 172 MEGKGDVM--STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG----YPPFYDE 225
Query: 269 GEEYFLQELVRKSIESNS 286
+ +++++ E +S
Sbjct: 226 NDSKLFEQILKAEYEFDS 243
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C ++ EF+ G L D + + N ++ ++ L +A
Sbjct: 265 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMA 321
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + R++ L E ++ K DF +S + G T+
Sbjct: 322 TQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAK 377
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 378 F-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 10/158 (6%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I+ Q +++K+ G + +V E+ G+++D I N + E + +
Sbjct: 75 ISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIAT----I 130
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
+ YLH F R I RDIK IL + AK DF V+ + + + N
Sbjct: 131 LQSTLKGLEYLH--FMRKI-HRDIKAGNILLNTEGHAKLADFGVAGQLTD---XMAKRNX 184
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
VIGT ++APE + N +D++S G +E+ GK
Sbjct: 185 VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 35/243 (14%)
Query: 88 GNLNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNG 146
GN++ E + ++ H+ +++ +E PI +V E+++ G+L D + G
Sbjct: 220 GNMSPEAF--LQEAQVMKKLRHEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGEMG 275
Query: 147 SQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSI 206
L + + +A +IA+ +AY+ V RD++ + IL E V K DF +
Sbjct: 276 KYLR---LPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLGR 329
Query: 207 SIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCF 266
I + + K + APE KSDV+SFG LL EL T R+ Y
Sbjct: 330 LIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 387
Query: 267 ENGEEYFLQELVRKSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQD 326
+E++D + G P + + L +L +C K ++
Sbjct: 388 N--------------------REVLDQVERGYRMPCPPECPESLH--DLMCQCWRKDPEE 425
Query: 327 RPT 329
RPT
Sbjct: 426 RPT 428
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Query: 101 IAFASQMSHKNILKFVGCCLETELP--ILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 158
I + H NI+K+ G C L+ E++ G+L D + + E L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ----AHAERIDHIKLL 120
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
+ +I + YL ++ + RD+ IL + +N K DF ++ +P+ K
Sbjct: 121 QYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 177
Query: 219 NKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + + SDV+SFG +L EL T
Sbjct: 178 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 88/226 (38%), Gaps = 39/226 (17%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV--------AMEIANAVAYLHVGFSRP 178
LV E++ G L D FL +HR ++ + +I + YL SR
Sbjct: 90 LVMEYLPSGCLRD------------FLQRHRARLDASRLLLYSSQICKGMEYLG---SRR 134
Query: 179 IVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANC 238
V RD+ IL + + K DF ++ +P K + + APE +S
Sbjct: 135 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 194
Query: 239 NEKSDVYSFGALLLELLT--GKRISYSSCFEN--GEEYFLQELVRKSIESNSFKEIVDPI 294
+ +SDV+SFG +L EL T K S S+ F G E + L R + + P
Sbjct: 195 SRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLELLEEGQRLPAPP 254
Query: 295 IVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQL 340
E EL C + S QDRP+ + QL L
Sbjct: 255 ACPAE------------VHELMKLCWAPSPQDRPSFSALGPQLDML 288
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 33/225 (14%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
++ H+ +++ +E PI +V E+++ G L D + G L + + +A +I
Sbjct: 69 KLRHEKLVQLYAVV--SEEPIYIVMEYMSKGCLLDFLKGEMGKYLR---LPQLVDMAAQI 123
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A+ +AY+ V RD++ + IL E V K DF ++ I + + K
Sbjct: 124 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--P 178
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSIES 284
+ APE KSDV+SFG LL EL T R+ Y
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----------------- 221
Query: 285 NSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPT 329
+E++D + G P + + S +L +C K ++RPT
Sbjct: 222 ---REVLDQVERGYRMPCPPECPE--SLHDLMCQCWRKDPEERPT 261
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 101/239 (42%), Gaps = 39/239 (16%)
Query: 108 SHKNILKFVGCCLETE-LPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 162
SH N+L +G CL +E P++V ++ G L + I H+P L F +
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 141
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK-THVNDNNKV 221
++A + +L S+ V RD+ + E+ K DF ++ + + + V++
Sbjct: 142 QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 198
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKS 281
++A E + T KSDV+SFG LL EL+T Y
Sbjct: 199 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP------------------ 240
Query: 282 IESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQL 340
+ N+F +I ++ G L PE L E+ +KC + RP+ ++ ++ +
Sbjct: 241 -DVNTF-DITVYLLQGRRLLQPEYCPDPL--YEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 101/239 (42%), Gaps = 39/239 (16%)
Query: 108 SHKNILKFVGCCLETE-LPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 162
SH N+L +G CL +E P++V ++ G L + I H+P L F +
Sbjct: 94 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 145
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK-THVNDNNKV 221
++A + +L S+ V RD+ + E+ K DF ++ + + + V++
Sbjct: 146 QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 202
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKS 281
++A E + T KSDV+SFG LL EL+T Y
Sbjct: 203 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP------------------ 244
Query: 282 IESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQL 340
+ N+F +I ++ G L PE L E+ +KC + RP+ ++ ++ +
Sbjct: 245 -DVNTF-DITVYLLQGRRLLQPEYCPDPL--YEVMLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 101/239 (42%), Gaps = 39/239 (16%)
Query: 108 SHKNILKFVGCCLETE-LPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 162
SH N+L +G CL +E P++V ++ G L + I H+P L F +
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 140
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK-THVNDNNKV 221
++A + +L S+ V RD+ + E+ K DF ++ + + + V++
Sbjct: 141 QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 197
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKS 281
++A E + T KSDV+SFG LL EL+T Y
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP------------------ 239
Query: 282 IESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQL 340
+ N+F +I ++ G L PE L E+ +KC + RP+ ++ ++ +
Sbjct: 240 -DVNTF-DITVYLLQGRRLLQPEYCPDPL--YEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 33/225 (14%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
++ H+ +++ +E PI +V E+++ G+L D + G L + + +A +I
Sbjct: 69 KLRHEKLVQLYAVV--SEEPIYIVCEYMSKGSLLDFLKGEMGKYLR---LPQLVDMAAQI 123
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A+ +AY+ V RD++ + IL E V K DF ++ I + + K
Sbjct: 124 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--P 178
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSIES 284
+ APE KSDV+SFG LL EL T R+ Y
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----------------- 221
Query: 285 NSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPT 329
+E++D + G P + + S +L +C K ++RPT
Sbjct: 222 ---REVLDQVERGYRMPCPPECPE--SLHDLMCQCWRKDPEERPT 261
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 101/239 (42%), Gaps = 39/239 (16%)
Query: 108 SHKNILKFVGCCLETE-LPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 162
SH N+L +G CL +E P++V ++ G L + I H+P L F +
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 141
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK-THVNDNNKV 221
++A + +L S+ V RD+ + E+ K DF ++ + + + V++
Sbjct: 142 QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGA 198
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKS 281
++A E + T KSDV+SFG LL EL+T Y
Sbjct: 199 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP------------------ 240
Query: 282 IESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQL 340
+ N+F +I ++ G L PE L E+ +KC + RP+ ++ ++ +
Sbjct: 241 -DVNTF-DITVYLLQGRRLLQPEYCPDPL--YEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 101/239 (42%), Gaps = 39/239 (16%)
Query: 108 SHKNILKFVGCCLETE-LPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 162
SH N+L +G CL +E P++V ++ G L + I H+P L F +
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 138
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK-THVNDNNKV 221
++A + +L S+ V RD+ + E+ K DF ++ + + + V++
Sbjct: 139 QVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 195
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKS 281
++A E + T KSDV+SFG LL EL+T Y
Sbjct: 196 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP------------------ 237
Query: 282 IESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQL 340
+ N+F +I ++ G L PE L E+ +KC + RP+ ++ ++ +
Sbjct: 238 -DVNTF-DITVYLLQGRRLLQPEYCPDPL--YEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C ++ EF+ G L D + + N ++ ++ L +A
Sbjct: 307 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMA 363
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + R++ L E ++ K DF +S + G T+
Sbjct: 364 TQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAK 419
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 420 F-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
++ H+ +++ +E PI +V E+++ G+L D + G L + + +A +I
Sbjct: 69 KIRHEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGEMGKYLR---LPQLVDMAAQI 123
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A+ +AY+ V RD++ + IL E V K DF ++ I + + K
Sbjct: 124 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--P 178
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
+ APE KSDV+SFG LL EL T R+ Y
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
A ++ H N+++ +G C ++ EF+ G L D + + N ++ ++ L +A
Sbjct: 268 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMA 324
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I++A+ YL + + R++ L E ++ K DF +S + G T+
Sbjct: 325 TQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAK 380
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV++FG LL E+ T
Sbjct: 381 F-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 101/239 (42%), Gaps = 39/239 (16%)
Query: 108 SHKNILKFVGCCLETE-LPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 162
SH N+L +G CL +E P++V ++ G L + I H+P L F +
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 140
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK-THVNDNNKV 221
++A + +L S+ V RD+ + E+ K DF ++ + + + V++
Sbjct: 141 QVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 197
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKS 281
++A E + T KSDV+SFG LL EL+T Y
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP------------------ 239
Query: 282 IESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQL 340
+ N+F +I ++ G L PE L E+ +KC + RP+ ++ ++ +
Sbjct: 240 -DVNTF-DITVYLLQGRRLLQPEYCPDPL--YEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 157
HKNI+ +G C + ++ E+ + G L + R P G + E K
Sbjct: 89 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 148
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
+ ++A + YL S+ + RD+ +L E NV K DF ++ I +
Sbjct: 149 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 205
Query: 218 NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
N + ++APE + +SDV+SFG L+ E+ T
Sbjct: 206 TNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Query: 143 DPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDF 202
D +G EP M+ + + ++A + +L SR + RD+ IL E NV K DF
Sbjct: 187 DSDGFYKEPITMEDLISYSFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDF 243
Query: 203 CVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
++ I + +V + + ++APE + + KSDV+S+G LL E+ +
Sbjct: 244 GLARDIYKNPDYVRKGDTRL-PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 157
HKNI+ +G C + ++ E+ + G L + R P G + E K
Sbjct: 92 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 151
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
+ ++A + YL S+ + RD+ +L E NV K DF ++ I +
Sbjct: 152 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 208
Query: 218 NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
N + ++APE + +SDV+SFG L+ E+ T
Sbjct: 209 TNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 102/239 (42%), Gaps = 39/239 (16%)
Query: 108 SHKNILKFVGCCLETE-LPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 162
SH N+L +G CL +E P++V ++ G L + I H+P +K + +
Sbjct: 148 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT--------VKDLIGFGL 199
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK-THVNDNNKV 221
++A + +L S+ V RD+ + E+ K DF ++ + + + V++
Sbjct: 200 QVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 256
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKS 281
++A E + T KSDV+SFG LL EL+T Y
Sbjct: 257 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP------------------ 298
Query: 282 IESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQL 340
+ N+F +I ++ G L PE L E+ +KC + RP+ ++ ++ +
Sbjct: 299 -DVNTF-DITVYLLQGRRLLQPEYCPDPL--YEVMLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 157
HKNI+ +G C + ++ E+ + G L + R P G + E K
Sbjct: 87 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 146
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
+ ++A + YL S+ + RD+ +L E NV K DF ++ I +
Sbjct: 147 VSCTYQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKT 203
Query: 218 NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
N + ++APE + +SDV+SFG L+ E+ T
Sbjct: 204 TNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 157
HKNI+ +G C + ++ E+ + G L + R P G + E K
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
+ ++A + YL S+ + RD+ +L E NV K DF ++ I +
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 218 NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
N + ++APE + +SDV+SFG L+ E+ T
Sbjct: 217 TNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 157
HKNI+ +G C + ++ E+ + G L + R P G + E K
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
+ ++A + YL S+ + RD+ +L E NV K DF ++ I +
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 218 NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
N + ++APE + +SDV+SFG L+ E+ T
Sbjct: 217 TNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 157
HKNI+ +G C + ++ E+ + G L + R P G + E K
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
+ ++A + YL S+ + RD+ +L E NV K DF ++ I +
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 218 NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
N + ++APE + +SDV+SFG L+ E+ T
Sbjct: 217 TNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
KV++ + +AYL I+ RD+KPS IL + K DF VS G+ +
Sbjct: 118 KVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMA 170
Query: 219 NKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
N +GT ++APE + + + +SD++S G L+EL G+
Sbjct: 171 NSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 16/184 (8%)
Query: 77 QDRPISVMKFGGNLNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGT 136
Q+ + V+ N + + ++ H NI+K ++ +V E G
Sbjct: 48 QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107
Query: 137 LADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNV 196
L D I + + F ++ ++ + + Y+H IV RD+KP IL + +
Sbjct: 108 LFDEI-----IKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEK 159
Query: 197 A---KFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
K DF +S + T + D IGT +IAPE + +EK DV+S G +L
Sbjct: 160 DCDIKIIDFGLSTCFQQN-TKMKDR---IGTAYYIAPEVLR-GTYDEKCDVWSAGVILYI 214
Query: 254 LLTG 257
LL+G
Sbjct: 215 LLSG 218
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 81/177 (45%), Gaps = 12/177 (6%)
Query: 84 MKFGGNLNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPIL--VFEFVACGTLADRI 141
+ +G +E+ + + ++ H NI+++ ++ L V E+ G LA I
Sbjct: 39 LDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI 98
Query: 142 HDPNGSQLEPFLMKH---RLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAK 198
G++ +L + R+ + +A + ++ RD+KP+ + + K
Sbjct: 99 --TKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVK 156
Query: 199 FFDFCVSISIPEGKTHVNDNNK-VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLEL 254
DF ++ + H D K +GT +++PE M+ + NEKSD++S G LL EL
Sbjct: 157 LGDFGLARIL----NHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 12/119 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS-ISIPEGKTHVNDNNKV 221
EI +A+ YLH + I+ RD+KP IL E + DF + + PE K N
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANSF 194
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL-QELVR 279
+GT +++PE ++ + ++ SD+++ G ++ +L+ G F G EY + Q++++
Sbjct: 195 VGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG-----LPPFRAGNEYLIFQKIIK 248
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
++ H+ +++ +E PI +V E++ G+L D + G L + + ++ +I
Sbjct: 66 KLRHEKLVQLYAVV--SEEPIYIVTEYMNKGSLLDFLKGETGKYLR---LPQLVDMSAQI 120
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A+ +AY+ V RD++ + IL E V K DF ++ I + + K
Sbjct: 121 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKF--P 175
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
+ APE KSDV+SFG LL EL T R+ Y
Sbjct: 176 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 215
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 33/225 (14%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
++ H+ +++ +E PI +V E+++ G L D + G L + + +A +I
Sbjct: 69 KLRHEKLVQLYAVV--SEEPIYIVTEYMSKGCLLDFLKGEMGKYLR---LPQLVDMAAQI 123
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A+ +AY+ V RD++ + IL E V K DF ++ I + + K
Sbjct: 124 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--P 178
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSIES 284
+ APE KSDV+SFG LL EL T R+ Y
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----------------- 221
Query: 285 NSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPT 329
+E++D + G P + + S +L +C K ++RPT
Sbjct: 222 ---REVLDQVERGYRMPCPPECPE--SLHDLMCQCWRKDPEERPT 261
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 157
HKNI+ +G C + ++ E+ + G L + R P G + E K
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
+ ++A + YL S+ + RD+ +L E NV K DF ++ I
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 218 NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
N + ++APE + +SDV+SFG L+ E+ T
Sbjct: 217 TNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 157
HKNI+ +G C + ++ E+ + G L + R P G + E K
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
+ ++A + YL S+ + RD+ +L E NV K DF ++ I +
Sbjct: 206 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 262
Query: 218 NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
N + ++APE + +SDV+SFG L+ E+ T
Sbjct: 263 TNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
++ H+ +++ +E PI +V E+++ G+L D + G L + + +A +I
Sbjct: 69 KLRHEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGEMGKYLR---LPQLVDMAAQI 123
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A+ +AY+ V RD+ + IL E V K DF ++ I + + K
Sbjct: 124 ASGMAYVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--P 178
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
+ APE KSDV+SFG LL EL T R+ Y
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 88/226 (38%), Gaps = 39/226 (17%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV--------AMEIANAVAYLHVGFSRP 178
LV E++ G L D FL +HR ++ + +I + YL SR
Sbjct: 91 LVMEYLPSGCLRD------------FLQRHRARLDASRLLLYSSQICKGMEYLG---SRR 135
Query: 179 IVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANC 238
V RD+ IL + + K DF ++ +P K + + APE +S
Sbjct: 136 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 195
Query: 239 NEKSDVYSFGALLLELLT--GKRISYSSCFEN--GEEYFLQELVRKSIESNSFKEIVDPI 294
+ +SDV+SFG +L EL T K S S+ F G E + L R + + P
Sbjct: 196 SRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPP 255
Query: 295 IVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQL 340
E EL C + S QDRP+ + QL L
Sbjct: 256 ACPAE------------VHELMKLCWAPSPQDRPSFSALGPQLDML 289
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 157
HKNI+ +G C + ++ E+ + G L + R P G + E K
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
+ ++A + YL S+ + RD+ +L E NV + DF ++ I +
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKT 216
Query: 218 NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
N + ++APE + +SDV+SFG L+ E+ T
Sbjct: 217 TNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 25/213 (11%)
Query: 60 EKVITKDLLYKLYKGFLQ------DRPISVMKFGGNLNSEEYCCF-NCIAFASQMSHKNI 112
+KVI ++YKG L+ + P+++ ++ F Q SH NI
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 113 LKFVGCCLETELPILVFEFVACGTLADRIHDPNG--SQLEPFLMKHRLKVAMEIANAVAY 170
++ G + + +++ E++ G L + + +G S L+ M + M+ + Y
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY 168
Query: 171 LHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI---PEGKTHVNDNNKVIGTFGF 227
+H RD+ IL V K DF +S + PE T+ K+ +
Sbjct: 169 VH---------RDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA-TYTTSGGKI--PIRW 216
Query: 228 IAPEYMSTANCNEKSDVYSFGALLLELLT-GKR 259
APE +S SDV+SFG ++ E++T G+R
Sbjct: 217 TAPEAISYRKFTSASDVWSFGIVMWEVMTYGER 249
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 157
HKNI+ +G C + ++ E+ + G L + R P G + E K
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
+ ++A + YL S+ + RD+ +L E NV K DF ++ I
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 218 NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
N + ++APE + +SDV+SFG L+ E+ T
Sbjct: 217 TNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 109 HKNILKFVGCCLETELPILVF-EFVACGTLADRIHD-----------PNGSQLEPFLMKH 156
H N++ +G C + P++V EF G L+ + P + ++H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 157 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVN 216
+ + ++A + +L SR + RD+ IL E+NV K DF ++ I + +V
Sbjct: 141 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ + ++APE + +SDV+SFG LL E+ +
Sbjct: 198 KGDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 19/176 (10%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLE-----PFLMKHRLKVAME 163
H+NI+ +G C +++ E+ G L + + + L+ P ++ L + +
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 168
Query: 164 IANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIG 223
+A +A+L S+ + RD+ +L +VAK DF ++ I +ND+N ++
Sbjct: 169 VAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI------MNDSNYIVK 219
Query: 224 -----TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL 274
++APE + +SDV+S+G LL E+ + Y N + Y L
Sbjct: 220 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 275
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
++ H+ +++ +E PI +V E++ G+L D + G L + + ++ +I
Sbjct: 66 KLRHEKLVQLYAVV--SEEPIYIVTEYMNKGSLLDFLKGETGKYLR---LPQLVDMSAQI 120
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
A+ +AY+ V RD++ + IL E V K DF ++ I + + K
Sbjct: 121 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--P 175
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
+ APE KSDV+SFG LL EL T R+ Y
Sbjct: 176 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 215
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 109 HKNILKFVGCCLETELPILVF-EFVACGTLADRIHD-----------PNGSQLEPFLMKH 156
H N++ +G C + P++V EF G L+ + P + ++H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 157 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVN 216
+ + ++A + +L SR + RD+ IL E+NV K DF ++ I + +V
Sbjct: 141 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ + ++APE + +SDV+SFG LL E+ +
Sbjct: 198 KGDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 109 HKNILKFVGCCLETELPILVF-EFVACGTLADRIHD-----------PNGSQLEPFLMKH 156
H N++ +G C + P++V EF G L+ + P + ++H
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 157 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVN 216
+ + ++A + +L SR + RD+ IL E+NV K DF ++ I + +V
Sbjct: 187 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ + ++APE + +SDV+SFG LL E+ +
Sbjct: 244 KGDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 16/184 (8%)
Query: 77 QDRPISVMKFGGNLNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGT 136
Q+ + V+ N + + ++ H NI+K ++ +V E G
Sbjct: 48 QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107
Query: 137 LADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNV 196
L D I + + F ++ ++ + + Y+H IV RD+KP IL + +
Sbjct: 108 LFDEI-----IKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEK 159
Query: 197 ---AKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
K DF +S + T + D IGT +IAPE + +EK DV+S G +L
Sbjct: 160 DCDIKIIDFGLSTCFQQN-TKMKDR---IGTAYYIAPEVLR-GTYDEKCDVWSAGVILYI 214
Query: 254 LLTG 257
LL+G
Sbjct: 215 LLSG 218
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 19/176 (10%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLE-----PFLMKHRLKVAME 163
H+NI+ +G C +++ E+ G L + + + L+ P ++ L + +
Sbjct: 101 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 164 IANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIG 223
+A +A+L S+ + RD+ +L +VAK DF ++ I +ND+N ++
Sbjct: 161 VAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI------MNDSNYIVK 211
Query: 224 -----TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL 274
++APE + +SDV+S+G LL E+ + Y N + Y L
Sbjct: 212 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 267
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 109 HKNILKFVGCCLETELPILVF-EFVACGTLADRIHD-----------PNGSQLEPFLMKH 156
H N++ +G C + P++V EF G L+ + P + ++H
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 157 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVN 216
+ + ++A + +L SR + RD+ IL E+NV K DF ++ I + +V
Sbjct: 152 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 208
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ + ++APE + +SDV+SFG LL E+ +
Sbjct: 209 KGDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 16/184 (8%)
Query: 77 QDRPISVMKFGGNLNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGT 136
Q+ + V+ N + + ++ H NI+K ++ +V E G
Sbjct: 48 QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107
Query: 137 LADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNV 196
L D I + + F ++ ++ + + Y+H IV RD+KP IL + +
Sbjct: 108 LFDEI-----IKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEK 159
Query: 197 ---AKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
K DF +S + T + D IGT +IAPE + +EK DV+S G +L
Sbjct: 160 DCDIKIIDFGLSTCFQQN-TKMKDR---IGTAYYIAPEVLR-GTYDEKCDVWSAGVILYI 214
Query: 254 LLTG 257
LL+G
Sbjct: 215 LLSG 218
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
++ ++ H N++ IL+ E VA G L D + ++ E + +
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEF 119
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAK----FFDFCVSISIPEGKTHVN 216
+I N V YLH S I D+KP I+ ++NV K DF ++ I G N
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----N 172
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ + GT F+APE ++ ++D++S G + LL+G
Sbjct: 173 EFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 109 HKNILKFVGCCLETELPILVF-EFVACGTLADRIHD-----------PNGSQLEPFLMKH 156
H N++ +G C + P++V EF G L+ + P + ++H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 157 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVN 216
+ + ++A + +L SR + RD+ IL E+NV K DF ++ I + +V
Sbjct: 150 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 206
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ + ++APE + +SDV+SFG LL E+ +
Sbjct: 207 KGDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
A EI + ++H +R +V+RD+KP+ IL E + D ++ + K H +
Sbjct: 297 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 349
Query: 221 VIGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTG 257
+GT G++APE + + S D +S G +L +LL G
Sbjct: 350 -VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
A EI + ++H +R +V+RD+KP+ IL E + D ++ + K H +
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 221 VIGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTG 257
+GT G++APE + + S D +S G +L +LL G
Sbjct: 351 -VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
A EI + ++H +R +V+RD+KP+ IL E + D ++ + K H +
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 221 VIGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTG 257
+GT G++APE + + S D +S G +L +LL G
Sbjct: 351 -VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
A EI + ++H +R +V+RD+KP+ IL E + D ++ + K H +
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 221 VIGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTG 257
+GT G++APE + + S D +S G +L +LL G
Sbjct: 351 -VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 25/159 (15%)
Query: 107 MSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
+ H ++K T+ PI ++ EF+A G+L D + GS+ +P + + + +IA
Sbjct: 234 LQHDKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSK-QP--LPKLIDFSAQIA 288
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+A++ R + RD++ + IL V K DF ++ +V F
Sbjct: 289 EGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLA--------------RVGAKF 331
Query: 226 --GFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
+ APE ++ + KSDV+SFG LL+E++T RI Y
Sbjct: 332 PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 370
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 23/181 (12%)
Query: 88 GNLNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNG 146
G+++ +E+ F ++SH ++KF G C E PI +V E+++ G L + + +G
Sbjct: 43 GSMSEDEF--FQEAQTMMKLSHPKLVKFYGVC-SKEYPIYIVTEYISNGCLLNYLRS-HG 98
Query: 147 SQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSI 206
LEP L++ ++ +A+L S + RD+ L D CV +
Sbjct: 99 KGLEP---SQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDR-------DLCVKV 145
Query: 207 SIPEGKTHVNDNNKV--IGT---FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRIS 261
S +V D+ V +GT + APE + KSDV++FG L+ E+ + ++
Sbjct: 146 SDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMP 205
Query: 262 Y 262
Y
Sbjct: 206 Y 206
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 88/226 (38%), Gaps = 39/226 (17%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV--------AMEIANAVAYLHVGFSRP 178
LV E++ G L D FL +HR ++ + +I + YL SR
Sbjct: 103 LVMEYLPSGCLRD------------FLQRHRARLDASRLLLYSSQICKGMEYLG---SRR 147
Query: 179 IVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANC 238
V RD+ IL + + K DF ++ +P K + + APE +S
Sbjct: 148 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 207
Query: 239 NEKSDVYSFGALLLELLT--GKRISYSSCFEN--GEEYFLQELVRKSIESNSFKEIVDPI 294
+ +SDV+SFG +L EL T K S S+ F G E + L R + + P
Sbjct: 208 SRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPP 267
Query: 295 IVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQL 340
E EL C + S QDRP+ + QL L
Sbjct: 268 ACPAE------------VHELMKLCWAPSPQDRPSFSALGPQLDML 301
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 15/159 (9%)
Query: 109 HKNILKFVGCCLETELPILVF-EFVACGTLADRIHD----------PNGSQLEPFLMKHR 157
H N++ +G C + P++V EF G L+ + P + ++H
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
+ + ++A + +L SR + RD+ IL E+NV K DF ++ I + V
Sbjct: 151 ICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 218 NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ + ++APE + +SDV+SFG LL E+ +
Sbjct: 208 GDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 109 HKNILKFVGCCLETELPILVF-EFVACGTLADRIHD-----------PNGSQLEPFLMKH 156
H N++ +G C + P++V EF G L+ + P + ++H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 157 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVN 216
+ + ++A + +L SR + RD+ IL E+NV K DF ++ I + V
Sbjct: 141 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ + ++APE + +SDV+SFG LL E+ +
Sbjct: 198 KGDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
++ ++ H N++ IL+ E VA G L D + ++ E + +
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEF 119
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAK----FFDFCVSISIPEGKTHVN 216
+I N V YLH S I D+KP I+ ++NV K DF ++ I G N
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----N 172
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ + GT F+APE ++ ++D++S G + LL+G
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 109 HKNILKFVGCCLETELPILVF-EFVACGTLADRIHD-----------PNGSQLEPFLMKH 156
H N++ +G C + P++V EF G L+ + P + ++H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 157 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVN 216
+ + ++A + +L SR + RD+ IL E+NV K DF ++ I + V
Sbjct: 141 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ + ++APE + +SDV+SFG LL E+ +
Sbjct: 198 KGDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
++ ++ H N++ IL+ E VA G L D + ++ E + +
Sbjct: 64 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEF 118
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAK----FFDFCVSISIPEGKTHVN 216
+I N V YLH S I D+KP I+ ++NV K DF ++ I G N
Sbjct: 119 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----N 171
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ + GT F+APE ++ ++D++S G + LL+G
Sbjct: 172 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
++ ++ H N++ IL+ E VA G L D + ++ E + +
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEF 119
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAK----FFDFCVSISIPEGKTHVN 216
+I N V YLH S I D+KP I+ ++NV K DF ++ I G N
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----N 172
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ + GT F+APE ++ ++D++S G + LL+G
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 17/183 (9%)
Query: 106 QMSHKNILKFVGCCLETELPIL-VFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q S+ L + C +TE + V E+V G L H +L +H + EI
Sbjct: 76 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM--FHMQRQRKLPE---EHARFYSAEI 130
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
+ A+ YLH R I++RD+K +L + K D+ + EG + + GT
Sbjct: 131 SLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMC---KEGLRPGDTTSXFCGT 184
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRI-----SYSSCFENGEEYFLQELVR 279
+IAPE + + D ++ G L+ E++ G+ S + +N E+Y Q ++
Sbjct: 185 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 244
Query: 280 KSI 282
K I
Sbjct: 245 KQI 247
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
++ ++ H N++ IL+ E VA G L D + ++ E + +
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEF 119
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAK----FFDFCVSISIPEGKTHVN 216
+I N V YLH S I D+KP I+ ++NV K DF ++ I G N
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----N 172
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ + GT F+APE ++ ++D++S G + LL+G
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 19/165 (11%)
Query: 103 FASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM 162
+A+ + +N +K + + + E+ TL D IH N +Q ++
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQR----DEYWRLFR 123
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI----------PEGK 212
+I A++Y+H S+ I+ RD+KP I E K DF ++ ++ +
Sbjct: 124 QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 213 THVNDN-NKVIGTFGFIAPEYMS-TANCNEKSDVYSFGALLLELL 255
+DN IGT ++A E + T + NEK D+YS G + E++
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 16/156 (10%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
++ H NI+ +L+ E V+ G L D + ++ E + +I
Sbjct: 85 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-----AEKESLTEDEATQFLKQIL 139
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVA----KFFDFCVSISIPEGKTHVNDNNKV 221
+ V YLH S+ I D+KP I+ ++NV K DF ++ I G N+ +
Sbjct: 140 DGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG----NEFKNI 192
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
GT F+APE ++ ++D++S G + LL+G
Sbjct: 193 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 109 HKNILKFVGCCLETELPILVF-EFVACGTLADRIHD-----------PNGSQLEPFLMKH 156
H N++ +G C + P++V EF G L+ + P + ++H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 157 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVN 216
+ + ++A + +L SR + RD+ IL E+NV K DF ++ I + V
Sbjct: 150 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ + ++APE + +SDV+SFG LL E+ +
Sbjct: 207 KGDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDF--CVSISIPEGKTHVNDN 218
A EI + +LH S+ IV+RD+K IL + K DF C + + KT
Sbjct: 125 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT----- 176
Query: 219 NKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
N+ GT +IAPE + N D +SFG LL E+L G+
Sbjct: 177 NEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
++ ++ H N++ IL+ E VA G L D + ++ E + +
Sbjct: 64 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEF 118
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAK----FFDFCVSISIPEGKTHVN 216
+I N V YLH S I D+KP I+ ++NV K DF ++ I G N
Sbjct: 119 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----N 171
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ + GT F+APE ++ ++D++S G + LL+G
Sbjct: 172 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
++ ++ H N++ IL+ E VA G L D + ++ E + +
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEF 119
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAK----FFDFCVSISIPEGKTHVN 216
+I N V YLH S I D+KP I+ ++NV K DF ++ I G N
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----N 172
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ + GT F+APE ++ ++D++S G + LL+G
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 16/156 (10%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
++ H NI+ +L+ E V+ G L D + ++ E + +I
Sbjct: 64 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-----AEKESLTEDEATQFLKQIL 118
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVA----KFFDFCVSISIPEGKTHVNDNNKV 221
+ V YLH S+ I D+KP I+ ++NV K DF ++ I G N+ +
Sbjct: 119 DGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG----NEFKNI 171
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
GT F+APE ++ ++D++S G + LL+G
Sbjct: 172 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 17/183 (9%)
Query: 106 QMSHKNILKFVGCCLETELPIL-VFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q S+ L + C +TE + V E+V G L H +L +H + EI
Sbjct: 108 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM--FHMQRQRKLPE---EHARFYSAEI 162
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
+ A+ YLH R I++RD+K +L + K D+ + EG + + GT
Sbjct: 163 SLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMC---KEGLRPGDTTSTFCGT 216
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRI-----SYSSCFENGEEYFLQELVR 279
+IAPE + + D ++ G L+ E++ G+ S + +N E+Y Q ++
Sbjct: 217 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 276
Query: 280 KSI 282
K I
Sbjct: 277 KQI 279
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
++ ++ H N++ IL+ E VA G L D + ++ E + +
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEF 119
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAK----FFDFCVSISIPEGKTHVN 216
+I N V YLH S I D+KP I+ ++NV K DF ++ I G N
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----N 172
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ + GT F+APE ++ ++D++S G + LL+G
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 29/177 (16%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD---------------------- 139
A ++ + NI+K +G C + L+FE++A G L +
Sbjct: 102 ALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRA 161
Query: 140 RIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKF 199
R+ P P +L +A ++A +AYL R V RD+ L E V K
Sbjct: 162 RVSSPGPP---PLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKI 215
Query: 200 FDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
DF +S +I + D N I ++ PE + +SDV+++G +L E+ +
Sbjct: 216 ADFGLSRNIYSADYYKADGNDAI-PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 80/170 (47%), Gaps = 22/170 (12%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR------LKV 160
+SH+ +++ G C + ++ E++A G L + + + M+HR L++
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 110
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
++ A+ YL S+ + RD+ L +Q V K DF +S + + + + +K
Sbjct: 111 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSK 167
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGE 270
+ PE + + + KSD+++FG L+ E+ + ++ Y F N E
Sbjct: 168 F--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER-FTNSE 214
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
++ ++ H N++ IL+ E VA G L D + ++ E + +
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEF 119
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAK----FFDFCVSISIPEGKTHVN 216
+I N V YLH S I D+KP I+ ++NV K DF ++ I G N
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----N 172
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ + GT F+APE ++ ++D++S G + LL+G
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 16/156 (10%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
++ H NI+ +L+ E V+ G L D + ++ E + +I
Sbjct: 71 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-----AEKESLTEDEATQFLKQIL 125
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVA----KFFDFCVSISIPEGKTHVNDNNKV 221
+ V YLH S+ I D+KP I+ ++NV K DF ++ I G N+ +
Sbjct: 126 DGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG----NEFKNI 178
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
GT F+APE ++ ++D++S G + LL+G
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
++ ++ H N++ IL+ E VA G L D + ++ E + +
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEF 119
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAK----FFDFCVSISIPEGKTHVN 216
+I N V YLH S I D+KP I+ ++NV K DF ++ I G N
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----N 172
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ + GT F+APE ++ ++D++S G + LL+G
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 93/243 (38%), Gaps = 41/243 (16%)
Query: 112 ILKFVGCCLETELP--ILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV--------A 161
I+K+ G P LV E++ G L D FL +HR ++ +
Sbjct: 70 IVKYRGVSYGPGRPELRLVMEYLPSGCLRD------------FLQRHRARLDASRLLLYS 117
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+I + YL SR V RD+ IL + + K DF ++ +P K
Sbjct: 118 SQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPG 174
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT--GKRISYSSCFEN--GEEYFLQEL 277
+ APE +S + +SDV+SFG +L EL T K S S+ F G E + L
Sbjct: 175 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPAL 234
Query: 278 VRKSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQL 337
R + + P E EL C + S QDRP+ + QL
Sbjct: 235 CRLLELLEEGQRLPAPPACPAE------------VHELMKLCWAPSPQDRPSFSALGPQL 282
Query: 338 RQL 340
L
Sbjct: 283 DML 285
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
++ ++ H N++ IL+ E VA G L D + ++ E + +
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEF 119
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAK----FFDFCVSISIPEGKTHVN 216
+I N V YLH S I D+KP I+ ++NV K DF ++ I G N
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----N 172
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ + GT F+APE ++ ++D++S G + LL+G
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
++ ++ H N++ IL+ E VA G L D + ++ E + +
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEF 119
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAK----FFDFCVSISIPEGKTHVN 216
+I N V YLH S I D+KP I+ ++NV K DF ++ I G N
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----N 172
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ + GT F+APE ++ ++D++S G + LL+G
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 17/183 (9%)
Query: 106 QMSHKNILKFVGCCLETELPIL-VFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q S+ L + C +TE + V E+V G L H +L +H + EI
Sbjct: 61 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM--FHMQRQRKLPE---EHARFYSAEI 115
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
+ A+ YLH R I++RD+K +L + K D+ + EG + + GT
Sbjct: 116 SLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMC---KEGLRPGDTTSXFCGT 169
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRI-----SYSSCFENGEEYFLQELVR 279
+IAPE + + D ++ G L+ E++ G+ S + +N E+Y Q ++
Sbjct: 170 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 229
Query: 280 KSI 282
K I
Sbjct: 230 KQI 232
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 79/176 (44%), Gaps = 10/176 (5%)
Query: 84 MKFGGNLNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPIL--VFEFVACGTLADRI 141
+ +G +E+ + + ++ H NI+++ ++ L V E+ G LA I
Sbjct: 39 LDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI 98
Query: 142 HDPNGSQLEPFLMKH---RLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAK 198
G++ +L + R+ + +A + ++ RD+KP+ + + K
Sbjct: 99 --TKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVK 156
Query: 199 FFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLEL 254
DF ++ + + +GT +++PE M+ + NEKSD++S G LL EL
Sbjct: 157 LGDFGLARILNHDTSFAK---TFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
++ ++ H N++ IL+ E VA G L D + ++ E + +
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEF 119
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAK----FFDFCVSISIPEGKTHVN 216
+I N V YLH S I D+KP I+ ++NV K DF ++ I G N
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----N 172
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ + GT F+APE ++ ++D++S G + LL+G
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 17/183 (9%)
Query: 106 QMSHKNILKFVGCCLETELPIL-VFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q S+ L + C +TE + V E+V G L H +L +H + EI
Sbjct: 65 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM--FHMQRQRKLPE---EHARFYSAEI 119
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
+ A+ YLH R I++RD+K +L + K D+ + EG + + GT
Sbjct: 120 SLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMC---KEGLRPGDTTSXFCGT 173
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRI-----SYSSCFENGEEYFLQELVR 279
+IAPE + + D ++ G L+ E++ G+ S + +N E+Y Q ++
Sbjct: 174 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 233
Query: 280 KSI 282
K I
Sbjct: 234 KQI 236
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 83/190 (43%), Gaps = 18/190 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+A + M H NI+++ E +V ++ G L RI+ G F L
Sbjct: 74 VAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVL---FQEDQILDW 130
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
++I A+ ++H R I+ RDIK I + + DF ++ + + V
Sbjct: 131 FVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL---NSTVELARA 184
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRK 280
IGT +++PE N KSD+++ G +L EL T K FE G ++ LV K
Sbjct: 185 CIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKH-----AFEAGS---MKNLVLK 236
Query: 281 SIESNSFKEI 290
I S SF +
Sbjct: 237 II-SGSFPPV 245
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 79/176 (44%), Gaps = 10/176 (5%)
Query: 84 MKFGGNLNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPIL--VFEFVACGTLADRI 141
+ +G +E+ + + ++ H NI+++ ++ L V E+ G LA I
Sbjct: 39 LDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI 98
Query: 142 HDPNGSQLEPFLMKH---RLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAK 198
G++ +L + R+ + +A + ++ RD+KP+ + + K
Sbjct: 99 --TKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVK 156
Query: 199 FFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLEL 254
DF ++ + + +GT +++PE M+ + NEKSD++S G LL EL
Sbjct: 157 LGDFGLARILNHDTSFAK---AFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS-ISIPEGKTHVNDNNKV 221
EI +A+ YLH + I+ RD+KP IL E + DF + + PE K N
Sbjct: 115 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 169
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL-QELVR 279
+GT +++PE ++ + + SD+++ G ++ +L+ G F G EY + Q++++
Sbjct: 170 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-----LPPFRAGNEYLIFQKIIK 223
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS-ISIPEGKTHVNDNNKV 221
EI +A+ YLH + I+ RD+KP IL E + DF + + PE K N
Sbjct: 118 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 172
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL-QELVR 279
+GT +++PE ++ + + SD+++ G ++ +L+ G F G EY + Q++++
Sbjct: 173 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-----LPPFRAGNEYLIFQKIIK 226
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS-ISIPEGKTHVNDNNKV 221
EI +A+ YLH + I+ RD+KP IL E + DF + + PE K N
Sbjct: 116 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 170
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL-QELVR 279
+GT +++PE ++ + + SD+++ G ++ +L+ G F G EY + Q++++
Sbjct: 171 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-----LPPFRAGNEYLIFQKIIK 224
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS-ISIPEGKTHVNDNNKV 221
EI +A+ YLH + I+ RD+KP IL E + DF + + PE K N
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANSF 195
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL-QELVR 279
+GT +++PE ++ + + SD+++ G ++ +L+ G F G EY + Q++++
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-----LPPFRAGNEYLIFQKIIK 249
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDF--CVSISIPEGKTHVNDN 218
A EI + +LH S+ IV+RD+K IL + K DF C + + KT
Sbjct: 124 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT----- 175
Query: 219 NKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
N GT +IAPE + N D +SFG LL E+L G+
Sbjct: 176 NXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS-ISIPEGKTHVNDNNKV 221
EI +A+ YLH + I+ RD+KP IL E + DF + + PE K N
Sbjct: 117 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 171
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL-QELVR 279
+GT +++PE ++ + + SD+++ G ++ +L+ G F G EY + Q++++
Sbjct: 172 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-----LPPFRAGNEYLIFQKIIK 225
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS-ISIPEGKTHVNDNNKV 221
EI +A+ YLH + I+ RD+KP IL E + DF + + PE K N
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANAF 192
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL-QELVR 279
+GT +++PE ++ + + SD+++ G ++ +L+ G F G EY + Q++++
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-----LPPFRAGNEYLIFQKIIK 246
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 80/170 (47%), Gaps = 22/170 (12%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR------LKV 160
+SH+ +++ G C + ++ E++A G L + + + M+HR L++
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 125
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
++ A+ YL S+ + RD+ L +Q V K DF +S + + + + +K
Sbjct: 126 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSK 182
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGE 270
+ PE + + + KSD+++FG L+ E+ + ++ Y F N E
Sbjct: 183 F--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER-FTNSE 229
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS-ISIPEGKTHVNDNNKV 221
EI +A+ YLH + I+ RD+KP IL E + DF + + PE K N
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 194
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL-QELVR 279
+GT +++PE ++ + + SD+++ G ++ +L+ G F G EY + Q++++
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-----LPPFRAGNEYLIFQKIIK 248
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 109 HKNILKFVGCCLETELPILVF-EFVACGTLADRIHD-----------PNGSQLEPFLMKH 156
H N++ +G C + P++V EF G L+ + P + ++H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 157 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVN 216
+ + ++A + +L SR + RD+ IL E+NV K DF ++ I + V
Sbjct: 150 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ + ++APE + +SDV+SFG LL E+ +
Sbjct: 207 KGDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS-ISIPEGKTHVNDNNKV 221
EI +A+ YLH + I+ RD+KP IL E + DF + + PE K N
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 195
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL-QELVR 279
+GT +++PE ++ + + SD+++ G ++ +L+ G F G EY + Q++++
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-----LPPFRAGNEYLIFQKIIK 249
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS-ISIPEGKTHVNDNNKV 221
EI +A+ YLH + I+ RD+KP IL E + DF + + PE K N
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 192
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL-QELVR 279
+GT +++PE ++ + + SD+++ G ++ +L+ G F G EY + Q++++
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-----LPPFRAGNEYLIFQKIIK 246
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS-ISIPEGKTHVNDNNKV 221
EI +A+ YLH + I+ RD+KP IL E + DF + + PE K N
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 194
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL-QELVR 279
+GT +++PE ++ + + SD+++ G ++ +L+ G F G EY + Q++++
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-----LPPFRAGNEYLIFQKIIK 248
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 9/152 (5%)
Query: 107 MSHKNILKFVGCCLETE-LPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
++H N+L +G L E LP ++ ++ G L I P Q P +K + +++A
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSP---QRNP-TVKDLISFGLQVA 134
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTH-VNDNNKVIGT 224
+ YL + V RD+ + E K DF ++ I + + + V +
Sbjct: 135 RGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLP 191
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ A E + T KSDV+SFG LL ELLT
Sbjct: 192 VKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS-ISIPEGKTHVNDNNKV 221
EI +A+ YLH + I+ RD+KP IL E + DF + + PE K N
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 192
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL-QELVR 279
+GT +++PE ++ + + SD+++ G ++ +L+ G F G EY + Q++++
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-----LPPFRAGNEYLIFQKIIK 246
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS-ISIPEGKTHVNDNNKV 221
EI +A+ YLH + I+ RD+KP IL E + DF + + PE K N
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 192
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL-QELVR 279
+GT +++PE ++ + + SD+++ G ++ +L+ G F G EY + Q++++
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-----LPPFRAGNEYLIFQKIIK 246
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS-ISIPEGKTHVNDNNKV 221
EI +A+ YLH + I+ RD+KP IL E + DF + + PE K N
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 194
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL-QELVR 279
+GT +++PE ++ + + SD+++ G ++ +L+ G F G EY + Q++++
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-----LPPFRAGNEYLIFQKIIK 248
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 157
HKNI+ +G C + ++ + + G L + R P G + E K
Sbjct: 100 HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
+ ++A + YL S+ + RD+ +L E NV K DF ++ I +
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 218 NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
N + ++APE + +SDV+SFG L+ E+ T
Sbjct: 217 TNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS-ISIPEGKTHVNDNNKV 221
EI +A+ YLH + I+ RD+KP IL E + DF + + PE K N
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 194
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+GT +++PE ++ + + SD+++ G ++ +L+ G
Sbjct: 195 VGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS-ISIPEGKTHVNDNNKV 221
EI +A+ YLH + I+ RD+KP IL E + DF + + PE K N
Sbjct: 143 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 197
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL-QELVR 279
+GT +++PE ++ + + SD+++ G ++ +L+ G F G EY + Q++++
Sbjct: 198 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-----LPPFRAGNEYLIFQKIIK 251
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS-ISIPEGKTHVNDNNKV 221
EI +A+ YLH + I+ RD+KP IL E + DF + + PE K N
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANSF 191
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL-QELVR 279
+GT +++PE ++ + + SD+++ G ++ +L+ G F G EY + Q++++
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-----LPPFRAGNEYLIFQKIIK 245
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 80/170 (47%), Gaps = 22/170 (12%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR------LKV 160
+SH+ +++ G C + ++ E++A G L + + + M+HR L++
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 125
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
++ A+ YL S+ + RD+ L +Q V K DF +S + + + + +K
Sbjct: 126 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 182
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGE 270
+ PE + + + KSD+++FG L+ E+ + ++ Y F N E
Sbjct: 183 F--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER-FTNSE 229
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS-ISIPEGKTHVNDNNKV 221
EI +A+ YLH + I+ RD+KP IL E + DF + + PE K N
Sbjct: 145 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 199
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL-QELVR 279
+GT +++PE ++ + + SD+++ G ++ +L+ G F G EY + Q++++
Sbjct: 200 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-----LPPFRAGNEYLIFQKIIK 253
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
A EIA+A+ YLH S IV+RD+KP IL Q DF + E H + +
Sbjct: 145 AAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLC---KENIEHNSTTST 198
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYS 263
GT ++APE + + D + GA+L E+L G YS
Sbjct: 199 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 241
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS-ISIPEGKTHVNDNNKV 221
EI +A+ YLH + I+ RD+KP IL E + DF + + PE K N
Sbjct: 122 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 176
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL-QELVR 279
+GT +++PE ++ + + SD+++ G ++ +L+ G F G EY + Q++++
Sbjct: 177 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-----LPPFRAGNEYLIFQKIIK 230
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 80/170 (47%), Gaps = 22/170 (12%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR------LKV 160
+SH+ +++ G C + ++ E++A G L + + + M+HR L++
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 110
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
++ A+ YL S+ + RD+ L +Q V K DF +S + + + + +K
Sbjct: 111 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 167
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGE 270
+ PE + + + KSD+++FG L+ E+ + ++ Y F N E
Sbjct: 168 F--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER-FTNSE 214
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 32/189 (16%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLADRI---------------HDPNGSQLE--- 150
H+NI+ +G C +++ E+ G L + + DP G E
Sbjct: 94 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGR 153
Query: 151 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPE 210
P ++ L + ++A +A+L S+ + RD+ +L +VAK DF ++ I
Sbjct: 154 PLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI-- 208
Query: 211 GKTHVNDNNKVIG-----TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSC 265
+ND+N ++ ++APE + +SDV+S+G LL E+ + Y
Sbjct: 209 ----MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 264
Query: 266 FENGEEYFL 274
N + Y L
Sbjct: 265 LVNSKFYKL 273
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 80/170 (47%), Gaps = 22/170 (12%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR------LKV 160
+SH+ +++ G C + ++ E++A G L + + + M+HR L++
Sbjct: 67 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 116
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
++ A+ YL S+ + RD+ L +Q V K DF +S + + + + +K
Sbjct: 117 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 173
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGE 270
+ PE + + + KSD+++FG L+ E+ + ++ Y F N E
Sbjct: 174 F--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER-FTNSE 220
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 80/170 (47%), Gaps = 22/170 (12%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR------LKV 160
+SH+ +++ G C + ++ E++A G L + + + M+HR L++
Sbjct: 60 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 109
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
++ A+ YL S+ + RD+ L +Q V K DF +S + + + + +K
Sbjct: 110 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 166
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGE 270
+ PE + + + KSD+++FG L+ E+ + ++ Y F N E
Sbjct: 167 F--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER-FTNSE 213
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS-ISIPEGKTHVNDNNKV 221
EI +A+ YLH + I+ RD+KP IL E + DF + + PE K N
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 191
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL-QELVR 279
+GT +++PE ++ + + SD+++ G ++ +L+ G F G EY + Q++++
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-----LPPFRAGNEYLIFQKIIK 245
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 80/170 (47%), Gaps = 22/170 (12%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR------LKV 160
+SH+ +++ G C + ++ E++A G L + + + M+HR L++
Sbjct: 56 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 105
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
++ A+ YL S+ + RD+ L +Q V K DF +S + + + + +K
Sbjct: 106 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 162
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGE 270
+ PE + + + KSD+++FG L+ E+ + ++ Y F N E
Sbjct: 163 F--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER-FTNSE 209
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 157
HKNI+ +G C + ++ + + G L + R P G + E K
Sbjct: 100 HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
+ ++A + YL S+ + RD+ +L E NV K DF ++ I +
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 218 NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
N + ++APE + +SDV+SFG L+ E+ T
Sbjct: 217 TNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 98 FNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDP--NGSQLEPFLMK 155
N I + + NI+ ++ L + +V E++A G+L D + + + Q+
Sbjct: 65 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA----- 119
Query: 156 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKF--FDFCVSISIPEGKT 213
V E A+ +LH S ++ RDIK IL K F FC I+ + K
Sbjct: 120 ---AVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK- 172
Query: 214 HVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
++++GT ++APE ++ K D++S G + +E++ G+
Sbjct: 173 ----RSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
++ Q+ H N++ +L+ E V+ G L D + +Q E +
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSF 120
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVA----KFFDFCVSISIPEGKTHVN 216
+I + V YLH ++ I D+KP I+ ++N+ K DF ++ I +G N
Sbjct: 121 IKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ GT F+APE ++ ++D++S G + LL+G
Sbjct: 178 ----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
++ Q+ H N++ +L+ E V+ G L D + +Q E +
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSF 120
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVA----KFFDFCVSISIPEGKTHVN 216
+I + V YLH ++ I D+KP I+ ++N+ K DF ++ I +G N
Sbjct: 121 IKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ GT F+APE ++ ++D++S G + LL+G
Sbjct: 178 ----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
++ Q+ H NI+ +L+ E V+ G L D + +Q E +
Sbjct: 66 VSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSF 120
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVA----KFFDFCVSISIPEGKTHVN 216
+I + V YLH ++ I D+KP I+ ++N+ K DF ++ I +G N
Sbjct: 121 IKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ GT F+APE ++ ++D++S G + LL+G
Sbjct: 178 ----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 13/157 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I + + H NIL+ + L+ E+ G L + F + +
Sbjct: 74 IEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT-----FDEQRTATI 128
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
E+A+A+ Y H + ++ RDIKP +L + K DF S+ P +
Sbjct: 129 MEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLR-----RKT 180
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ GT ++ PE + NEK D++ G L ELL G
Sbjct: 181 MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
++ ++ H N++ IL+ E VA G L D + ++ E + +
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL-----AEKESLTEEEATEF 119
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAK----FFDFCVSISIPEGKTHVN 216
+I N V YLH S I D+KP I+ ++NV K DF ++ I G N
Sbjct: 120 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----N 172
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ + GT F+APE ++ ++D++S G + LL+G
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 20/111 (18%)
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDF-------------CV 204
L + ++IA AV +LH S+ ++ RD+KPS I F +V K DF V
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 205 SISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELL 255
+P H +GT +++PE + + + K D++S G +L ELL
Sbjct: 178 LTPMPAYARHTGQ----VGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 80/193 (41%), Gaps = 25/193 (12%)
Query: 77 QDRPISVMKFGGNLNSEEYCCF-NCIAFASQMSHKNILKFVGCCLETELPILVFEFVACG 135
+D P+++ + F + + Q H NI++ G L ++V E++ G
Sbjct: 76 RDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENG 135
Query: 136 TLAD--RIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQE 193
+L R HD + ++ M + M + + Y+H RD+ +L
Sbjct: 136 SLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVH---------RDLAARNVLVDS 186
Query: 194 QNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFG------FIAPEYMSTANCNEKSDVYSF 247
V K DF +S + +D + T G + APE ++ + SDV+SF
Sbjct: 187 NLVCKVSDFGLS------RVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSF 240
Query: 248 GALLLELLT-GKR 259
G ++ E+L G+R
Sbjct: 241 GVVMWEVLAYGER 253
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Query: 98 FNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDP--NGSQLEPFLMK 155
N I + + NI+ ++ L + +V E++A G+L D + + + Q+
Sbjct: 66 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA----- 120
Query: 156 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKF--FDFCVSISIPEGKT 213
V E A+ +LH S ++ RDIK IL K F FC I+ + K
Sbjct: 121 ---AVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK- 173
Query: 214 HVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ ++GT ++APE ++ K D++S G + +E++ G+
Sbjct: 174 ----RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 80/193 (41%), Gaps = 25/193 (12%)
Query: 77 QDRPISVMKF-GGNLNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACG 135
+D P+++ G + + + Q H NI++ G L ++V E++ G
Sbjct: 76 RDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENG 135
Query: 136 TLAD--RIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQE 193
+L R HD + ++ M + M + + Y+H RD+ +L
Sbjct: 136 SLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVH---------RDLAARNVLVDS 186
Query: 194 QNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFG------FIAPEYMSTANCNEKSDVYSF 247
V K DF +S + +D + T G + APE ++ + SDV+SF
Sbjct: 187 NLVCKVSDFGLS------RVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSF 240
Query: 248 GALLLELLT-GKR 259
G ++ E+L G+R
Sbjct: 241 GVVMWEVLAYGER 253
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 22/163 (13%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ Q+ H NI+K + LV E G L D I + F ++
Sbjct: 83 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARI 137
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNV---AKFFDFCVSISIPEGKTHVND 217
++ + + Y+H IV RD+KP +L + ++ + DF +S TH
Sbjct: 138 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEA 187
Query: 218 NNKV---IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ K+ IGT +IAPE + +EK DV+S G +L LL+G
Sbjct: 188 SKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 229
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
++ Q+ H N++ +L+ E V+ G L D + +Q E +
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSF 120
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVA----KFFDFCVSISIPEGKTHVN 216
+I + V YLH ++ I D+KP I+ ++N+ K DF ++ I +G N
Sbjct: 121 IKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ GT F+APE ++ ++D++S G + LL+G
Sbjct: 178 ----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Query: 98 FNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDP--NGSQLEPFLMK 155
N I + + NI+ ++ L + +V E++A G+L D + + + Q+
Sbjct: 65 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA----- 119
Query: 156 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKF--FDFCVSISIPEGKT 213
V E A+ +LH S ++ RDIK IL K F FC I+ + K
Sbjct: 120 ---AVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK- 172
Query: 214 HVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ ++GT ++APE ++ K D++S G + +E++ G+
Sbjct: 173 ----RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
++ Q+ H N++ +L+ E V+ G L D + +Q E +
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSF 120
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVA----KFFDFCVSISIPEGKTHVN 216
+I + V YLH ++ I D+KP I+ ++N+ K DF ++ I +G N
Sbjct: 121 IKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ GT F+APE ++ ++D++S G + LL+G
Sbjct: 178 ----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 19/157 (12%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIH---DPNGSQLEPFLMKHRLKVA 161
+ M H ++++ +G CL + LV + + G L + +H D GSQL L
Sbjct: 95 ASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQL-------LLNWC 146
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEG--KTHVNDNN 219
++IA + YL R +V RD+ +L + N K DF ++ + EG K + D
Sbjct: 147 VQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLA-RLLEGDEKEYNADGG 202
Query: 220 KVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
K+ ++A E + +SDV+S+G + EL+T
Sbjct: 203 KM--PIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Query: 98 FNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDP--NGSQLEPFLMK 155
N I + + NI+ ++ L + +V E++A G+L D + + + Q+
Sbjct: 65 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA----- 119
Query: 156 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKF--FDFCVSISIPEGKT 213
V E A+ +LH S ++ RDIK IL K F FC I+ + K
Sbjct: 120 ---AVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK- 172
Query: 214 HVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ ++GT ++APE ++ K D++S G + +E++ G+
Sbjct: 173 ----RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
++ Q+ H N++ +L+ E V+ G L D + +Q E +
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSF 120
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVA----KFFDFCVSISIPEGKTHVN 216
+I + V YLH ++ I D+KP I+ ++N+ K DF ++ I +G N
Sbjct: 121 IKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ GT F+APE ++ ++D++S G + LL+G
Sbjct: 178 ----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 99 NCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 158
N IA ++ H+NI+ T LV + V+ G L DRI + G E K
Sbjct: 55 NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILE-RGVYTE----KDAS 109
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILF---QEQNVAKFFDFCVSISIPEGKTHV 215
V ++ +AV YLH IV RD+KP +L+ +E + DF +S G
Sbjct: 110 LVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM-- 164
Query: 216 NDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ GT G++APE ++ ++ D +S G + LL G
Sbjct: 165 ---STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
KV++ + + YL I+ RD+KPS IL + K DF VS G+ +
Sbjct: 127 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMA 179
Query: 219 NKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
N +GT +++PE + + + +SD++S G L+E+ G+
Sbjct: 180 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 22/163 (13%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ Q+ H NI+K + LV E G L D I + F ++
Sbjct: 101 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARI 155
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVA---KFFDFCVSISIPEGKTHVND 217
++ + + Y+H IV RD+KP +L + ++ + DF +S TH
Sbjct: 156 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEA 205
Query: 218 NNKV---IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ K+ IGT +IAPE + +EK DV+S G +L LL+G
Sbjct: 206 SKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 247
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 19/157 (12%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIH---DPNGSQLEPFLMKHRLKVA 161
+ M H ++++ +G CL + LV + + G L + +H D GSQL L
Sbjct: 72 ASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQL-------LLNWC 123
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEG--KTHVNDNN 219
++IA + YL R +V RD+ +L + N K DF ++ + EG K + D
Sbjct: 124 VQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLA-RLLEGDEKEYNADGG 179
Query: 220 KVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
K+ ++A E + +SDV+S+G + EL+T
Sbjct: 180 KM--PIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 9/163 (5%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHD--PNGSQLEPFLMKHRL 158
I SQ H NI+ + + + LV + ++ G++ D I G L + +
Sbjct: 64 IQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTI 123
Query: 159 KVAM-EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK--THV 215
+ E+ + YLH + RD+K IL E + DF VS + G T
Sbjct: 124 ATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRN 180
Query: 216 NDNNKVIGTFGFIAPEYMSTANCNE-KSDVYSFGALLLELLTG 257
+GT ++APE M + K+D++SFG +EL TG
Sbjct: 181 KVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
KV++ + + YL I+ RD+KPS IL + K DF VS G+ +
Sbjct: 135 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMA 187
Query: 219 NKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
N +GT +++PE + + + +SD++S G L+E+ G+
Sbjct: 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 22/163 (13%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ Q+ H NI+K + LV E G L D I + F ++
Sbjct: 100 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARI 154
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVA---KFFDFCVSISIPEGKTHVND 217
++ + + Y+H IV RD+KP +L + ++ + DF +S TH
Sbjct: 155 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEA 204
Query: 218 NNKV---IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ K+ IGT +IAPE + +EK DV+S G +L LL+G
Sbjct: 205 SKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 246
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 22/163 (13%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ Q+ H NI+K + LV E G L D I + F ++
Sbjct: 77 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARI 131
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVA---KFFDFCVSISIPEGKTHVND 217
++ + + Y+H IV RD+KP +L + ++ + DF +S TH
Sbjct: 132 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEA 181
Query: 218 NNKV---IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ K+ IGT +IAPE + +EK DV+S G +L LL+G
Sbjct: 182 SKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS-ISIPEGKTHVNDNNKV 221
EI +A+ YLH + I+ RD+KP IL E + DF + + PE K N
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ--ARANXF 194
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+GT +++PE ++ + + SD+++ G ++ +L+ G
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 25/167 (14%)
Query: 107 MSHKNILKFVGC-----CLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
M H+NIL+F+G ++ +L L+ F G+L+D + S E +A
Sbjct: 75 MKHENILQFIGAEKRGTSVDVDL-WLITAFHEKGSLSDFLKANVVSWNE------LCHIA 127
Query: 162 MEIANAVAYLHV-------GFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTH 214
+A +AYLH G I RDIK +L + A DF +++ GK+
Sbjct: 128 ETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS- 186
Query: 215 VNDNNKVIGTFGFIAPEYMSTA-----NCNEKSDVYSFGALLLELLT 256
D + +GT ++APE + A + + D+Y+ G +L EL +
Sbjct: 187 AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 22/179 (12%)
Query: 91 NSEEYCCFNCIAFASQMSHKNIL--KFVGCCLE----TELPILVFEFVACGTLADRIHD- 143
N E +C I +++H N++ + V L+ +LP+L E+ G L ++
Sbjct: 55 NRERWCLE--IQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQF 112
Query: 144 PNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQ---EQNVAKFF 200
N L+ ++ L +I++A+ YLH I+ RD+KP I+ Q ++ + K
Sbjct: 113 ENCCGLKEGPIRTLLS---DISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKII 166
Query: 201 DFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKR 259
D + + +G+ + +GT ++APE + D +SFG L E +TG R
Sbjct: 167 DLGYAKELDQGEL----CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 22/179 (12%)
Query: 91 NSEEYCCFNCIAFASQMSHKNIL--KFVGCCLE----TELPILVFEFVACGTLADRIHD- 143
N E +C I +++H N++ + V L+ +LP+L E+ G L ++
Sbjct: 56 NRERWCLE--IQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQF 113
Query: 144 PNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQ---EQNVAKFF 200
N L+ ++ L +I++A+ YLH I+ RD+KP I+ Q ++ + K
Sbjct: 114 ENCCGLKEGPIRTLLS---DISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKII 167
Query: 201 DFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKR 259
D + + +G+ + +GT ++APE + D +SFG L E +TG R
Sbjct: 168 DLGYAKELDQGEL----CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
KV++ + + YL I+ RD+KPS IL + K DF VS G+ +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMA 160
Query: 219 NKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
N +GT +++PE + + + +SD++S G L+E+ G+
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
KV++ + + YL I+ RD+KPS IL + K DF VS G+ +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMA 160
Query: 219 NKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
N +GT +++PE + + + +SD++S G L+E+ G+
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
KV++ + + YL I+ RD+KPS IL + K DF VS G+ +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMA 160
Query: 219 NKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
N +GT +++PE + + + +SD++S G L+E+ G+
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
KV++ + + YL I+ RD+KPS IL + K DF VS G+ +
Sbjct: 170 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMA 222
Query: 219 NKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
N +GT +++PE + + + +SD++S G L+E+ G+
Sbjct: 223 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
K+ + I A+ YL ++ RD+KPS IL E+ K DF +S + + K
Sbjct: 128 KMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA----K 181
Query: 219 NKVIGTFGFIAPEYMSTANCNE-----KSDVYSFGALLLELLTGKRISYSSC 265
++ G ++APE + + + ++DV+S G L+EL TG+ Y +C
Sbjct: 182 DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ-FPYKNC 232
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 9/163 (5%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHD--PNGSQLEPFLMKHRL 158
I SQ H NI+ + + + LV + ++ G++ D I G L + +
Sbjct: 59 IQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTI 118
Query: 159 KVAM-EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK--THV 215
+ E+ + YLH + RD+K IL E + DF VS + G T
Sbjct: 119 ATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRN 175
Query: 216 NDNNKVIGTFGFIAPEYMSTANCNE-KSDVYSFGALLLELLTG 257
+GT ++APE M + K+D++SFG +EL TG
Sbjct: 176 KVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
KV++ + + YL I+ RD+KPS IL + K DF VS G+ +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMA 160
Query: 219 NKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
N +GT +++PE + + + +SD++S G L+E+ G+
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
KV++ + + YL I+ RD+KPS IL + K DF VS G+
Sbjct: 111 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDEMA 163
Query: 219 NKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
N+ +GT +++PE + + + +SD++S G L+E+ G+
Sbjct: 164 NEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
++SH NI+K + ET I LV E V G L DRI + G E + +I
Sbjct: 104 RLSHPNIIK-LKEIFETPTEISLVLELVTGGELFDRIVE-KGYYSE----RDAADAVKQI 157
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQE---QNVAKFFDFCVSISIPEGKTHVNDNNKV 221
AVAYLH IV RD+KP +L+ K DF +S + H V
Sbjct: 158 LEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV----EHQVLMKTV 210
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELV 278
GT G+ APE + + D++S G + LL G Y E G+++ + ++
Sbjct: 211 CGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYD---ERGDQFMFRRIL 264
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
KV++ + + YL I+ RD+KPS IL + K DF VS G+ +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMA 160
Query: 219 NKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
N +GT +++PE + + + +SD++S G L+E+ G+
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 80/191 (41%), Gaps = 32/191 (16%)
Query: 78 DRPISVMKFGGNLNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTL 137
+R I +++ S +A + H NI+K + LV E G L
Sbjct: 64 ERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL 123
Query: 138 ADRIHDPNGSQLEPFLMKHRLK--------VAMEIANAVAYLHVGFSRPIVFRDIKPSTI 189
D I HR+K + ++ + V YLH IV RD+KP +
Sbjct: 124 FDEI-------------IHRMKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENL 167
Query: 190 LFQEQN---VAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
L + + + K DF +S ++ E + + + +GT +IAPE + +EK DV+S
Sbjct: 168 LLESKEKDALIKIVDFGLS-AVFENQKKMKER---LGTAYYIAPEVLRK-KYDEKCDVWS 222
Query: 247 FGALLLELLTG 257
G +L LL G
Sbjct: 223 IGVILFILLAG 233
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 9/165 (5%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHD--PNGSQLEPFLMKHRLKVAM 162
S+++H+NI++ +G L++ ++ E +A G L + + P SQ M L VA
Sbjct: 103 SKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ---EQNVAKFFDFCVSISIPEGKTHVNDNN 219
+IA YL + RDI L VAK DF ++ I +
Sbjct: 163 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 219
Query: 220 KVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
++ ++ PE K+D +SFG LL E+ + + Y S
Sbjct: 220 AML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 263
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 81/182 (44%), Gaps = 25/182 (13%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLADRI-----------HDPNGSQLEPFLMKHR 157
H+NI+ +G C +++ E+ G L + + ++P+ + E +
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDL 168
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
L + ++A +A+L S+ + RD+ +L +VAK DF ++ I +ND
Sbjct: 169 LHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI------MND 219
Query: 218 NNKVIG-----TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEY 272
+N ++ ++APE + +SDV+S+G LL E+ + Y N + Y
Sbjct: 220 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 279
Query: 273 FL 274
L
Sbjct: 280 KL 281
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 9/165 (5%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHD--PNGSQLEPFLMKHRLKVAM 162
S+++H+NI++ +G L++ ++ E +A G L + + P SQ M L VA
Sbjct: 89 SKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ---EQNVAKFFDFCVSISIPEGKTHVNDNN 219
+IA YL + RDI L VAK DF ++ I +
Sbjct: 149 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 205
Query: 220 KVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
++ ++ PE K+D +SFG LL E+ + + Y S
Sbjct: 206 AML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 249
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 27/204 (13%)
Query: 90 LNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQL 149
L +E N IA ++ H NI+ L+ + V+ G L DRI +
Sbjct: 56 LEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--- 112
Query: 150 EPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILF---QEQNVAKFFDFCVSI 206
+ + ++ ++ +AV YLH IV RD+KP +L+ E + DF
Sbjct: 113 --YTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDF---- 163
Query: 207 SIPEGKTHVNDNNKVI----GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
G + + D V+ GT G++APE ++ ++ D +S G + LL G Y
Sbjct: 164 ----GLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG----Y 215
Query: 263 SSCFENGEEYFLQELVRKSIESNS 286
++ + +++++ E +S
Sbjct: 216 PPFYDENDAKLFEQILKAEYEFDS 239
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 23/181 (12%)
Query: 83 VMKFGGNLNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIH 142
++K G + EE N I+ +Q+ H N+++ +LV E+V G L DRI
Sbjct: 121 IIKTRGMKDKEE--VKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRII 178
Query: 143 DP--NGSQLEPFL-MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVA-- 197
D N ++L+ L MK +I + ++H + I+ D+KP IL ++
Sbjct: 179 DESYNLTELDTILFMK-------QICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQI 228
Query: 198 KFFDFCVSISI-PEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
K DF ++ P K VN GT F+APE ++ + +D++S G + LL+
Sbjct: 229 KIIDFGLARRYKPREKLKVN-----FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLS 283
Query: 257 G 257
G
Sbjct: 284 G 284
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 27/204 (13%)
Query: 90 LNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQL 149
L +E N IA ++ H NI+ L+ + V+ G L DRI +
Sbjct: 56 LEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--- 112
Query: 150 EPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILF---QEQNVAKFFDFCVSI 206
+ + ++ ++ +AV YLH IV RD+KP +L+ E + DF
Sbjct: 113 --YTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDF---- 163
Query: 207 SIPEGKTHVNDNNKVI----GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
G + + D V+ GT G++APE ++ ++ D +S G + LL G Y
Sbjct: 164 ----GLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG----Y 215
Query: 263 SSCFENGEEYFLQELVRKSIESNS 286
++ + +++++ E +S
Sbjct: 216 PPFYDENDAKLFEQILKAEYEFDS 239
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 27/204 (13%)
Query: 90 LNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQL 149
L +E N IA ++ H NI+ L+ + V+ G L DRI +
Sbjct: 56 LEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--- 112
Query: 150 EPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILF---QEQNVAKFFDFCVSI 206
+ + ++ ++ +AV YLH IV RD+KP +L+ E + DF
Sbjct: 113 --YTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDF---- 163
Query: 207 SIPEGKTHVNDNNKVI----GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
G + + D V+ GT G++APE ++ ++ D +S G + LL G Y
Sbjct: 164 ----GLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG----Y 215
Query: 263 SSCFENGEEYFLQELVRKSIESNS 286
++ + +++++ E +S
Sbjct: 216 PPFYDENDAKLFEQILKAEYEFDS 239
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 27/204 (13%)
Query: 90 LNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQL 149
L +E N IA ++ H NI+ L+ + V+ G L DRI +
Sbjct: 56 LEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--- 112
Query: 150 EPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILF---QEQNVAKFFDFCVSI 206
+ + ++ ++ +AV YLH IV RD+KP +L+ E + DF
Sbjct: 113 --YTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDF---- 163
Query: 207 SIPEGKTHVNDNNKVI----GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY 262
G + + D V+ GT G++APE ++ ++ D +S G + LL G Y
Sbjct: 164 ----GLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG----Y 215
Query: 263 SSCFENGEEYFLQELVRKSIESNS 286
++ + +++++ E +S
Sbjct: 216 PPFYDENDAKLFEQILKAEYEFDS 239
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHD--PNGSQLEPFLMKHRLKVAM 162
S+ +H+NI++ +G L++ ++ E +A G L + + P SQ M L VA
Sbjct: 115 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 174
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ---EQNVAKFFDFCVSISIPEGKTHVNDNN 219
+IA YL + RDI L VAK DF ++ I +
Sbjct: 175 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 231
Query: 220 KVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
++ ++ PE K+D +SFG LL E+ + + Y S
Sbjct: 232 AML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 275
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 101 IAFASQMSHKNILKFVGC-CLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK 159
I + H NI+K + E L IL+ EF A G + D +LE L + +++
Sbjct: 58 IDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAV-----DAVMLELERPLTESQIQ 111
Query: 160 VA-MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
V + +A+ YLH I+ RD+K ILF K DF VS +T +
Sbjct: 112 VVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRTXIQRR 166
Query: 219 NKVIGTFGFIAPEYMSTANCNE-----KSDVYSFGALLLEL 254
+ IGT ++APE + + K+DV+S G L+E+
Sbjct: 167 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+VA G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 105 MVMEYVAGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 156
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L EQ + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 157 ENLLIDEQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 210
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 211 LGVLIYEMAAG 221
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHD--PNGSQLEPFLMKHRLKVAM 162
S+ +H+NI++ +G L++ ++ E +A G L + + P SQ M L VA
Sbjct: 105 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 164
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ---EQNVAKFFDFCVSISIPEGKTHVNDNN 219
+IA YL + RDI L VAK DF ++ I +
Sbjct: 165 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 221
Query: 220 KVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
++ ++ PE K+D +SFG LL E+ + + Y S
Sbjct: 222 AML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 265
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+VA G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVAGGEMFSHLR-----RIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHD--PNGSQLEPFLMKHRLKVAM 162
S+ +H+NI++ +G L++ ++ E +A G L + + P SQ M L VA
Sbjct: 95 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 154
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ---EQNVAKFFDFCVSISIPEGKTHVNDNN 219
+IA YL + RDI L VAK DF ++ I +
Sbjct: 155 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 211
Query: 220 KVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
++ ++ PE K+D +SFG LL E+ + + Y S
Sbjct: 212 AML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 255
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+VA G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVAGGEMFSHLR-----RIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+VA G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 113 MVMEYVAGGEMFSHLR-----RIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 164
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 165 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 218
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 219 LGVLIYEMAAG 229
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+VA G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVAGGEMFSHLR-----RIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+VA G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 139 MVMEYVAGGEMFSHLR-----RIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 190
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 191 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 244
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 245 LGVLIYEMAAG 255
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHD--PNGSQLEPFLMKHRLKVAM 162
S+ +H+NI++ +G L++ ++ E +A G L + + P SQ M L VA
Sbjct: 88 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 147
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ---EQNVAKFFDFCVSISIPEGKTHVNDNN 219
+IA YL + RDI L VAK DF ++ I +
Sbjct: 148 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 204
Query: 220 KVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
++ ++ PE K+D +SFG LL E+ + + Y S
Sbjct: 205 AML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 248
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHD--PNGSQLEPFLMKHRLKVAM 162
S+ +H+NI++ +G L++ ++ E +A G L + + P SQ M L VA
Sbjct: 80 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 139
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ---EQNVAKFFDFCVSISIPEGKTHVNDNN 219
+IA YL + RDI L VAK DF ++ I +
Sbjct: 140 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 196
Query: 220 KVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
++ ++ PE K+D +SFG LL E+ + + Y S
Sbjct: 197 AML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 240
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+VA G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVAGGEMFSHLR-----RIGRFAEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+VA G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVAGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LXGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHD--PNGSQLEPFLMKHRLKVAM 162
S+ +H+NI++ +G L++ ++ E +A G L + + P SQ M L VA
Sbjct: 103 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ---EQNVAKFFDFCVSISIPEGKTHVNDNN 219
+IA YL + RDI L VAK DF ++ I +
Sbjct: 163 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 219
Query: 220 KVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
++ ++ PE K+D +SFG LL E+ + + Y S
Sbjct: 220 AML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 263
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+VA G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVAGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LAGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHD--PNGSQLEPFLMKHRLKVAM 162
S+ +H+NI++ +G L++ ++ E +A G L + + P SQ M L VA
Sbjct: 103 SKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ---EQNVAKFFDFCVSISIPEGKTHVNDNN 219
+IA YL + RDI L VAK DF ++ I +
Sbjct: 163 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 219
Query: 220 KVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
++ ++ PE K+D +SFG LL E+ + + Y S
Sbjct: 220 AML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 263
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHD--PNGSQLEPFLMKHRLKVAM 162
S+ +H+NI++ +G L++ ++ E +A G L + + P SQ M L VA
Sbjct: 106 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 165
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ---EQNVAKFFDFCVSISIPEGKTHVNDNN 219
+IA YL + RDI L VAK DF ++ I +
Sbjct: 166 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGC 222
Query: 220 KVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
++ ++ PE K+D +SFG LL E+ + + Y S
Sbjct: 223 AML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 266
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHD--PNGSQLEPFLMKHRLKVAM 162
S+ +H+NI++ +G L++ ++ E +A G L + + P SQ M L VA
Sbjct: 129 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 188
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ---EQNVAKFFDFCVSISIPEGKTHVNDNN 219
+IA YL + RDI L VAK DF ++ I +
Sbjct: 189 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGC 245
Query: 220 KVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
++ ++ PE K+D +SFG LL E+ + + Y S
Sbjct: 246 AML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 289
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHD--PNGSQLEPFLMKHRLKVAM 162
S+ +H+NI++ +G L++ ++ E +A G L + + P SQ M L VA
Sbjct: 89 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ---EQNVAKFFDFCVSISIPEGKTHVNDNN 219
+IA YL + RDI L VAK DF ++ I +
Sbjct: 149 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 205
Query: 220 KVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
++ ++ PE K+D +SFG LL E+ + + Y S
Sbjct: 206 AML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 249
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHD--PNGSQLEPFLMKHRLKVAM 162
S+ +H+NI++ +G L++ ++ E +A G L + + P SQ M L VA
Sbjct: 88 SKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 147
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ---EQNVAKFFDFCVSISIPEGKTHVNDNN 219
+IA YL + RDI L VAK DF ++ I +
Sbjct: 148 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 204
Query: 220 KVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
++ ++ PE K+D +SFG LL E+ + + Y S
Sbjct: 205 AML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 248
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHD--PNGSQLEPFLMKHRLKVAM 162
S+ +H+NI++ +G L++ ++ E +A G L + + P SQ M L VA
Sbjct: 89 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ---EQNVAKFFDFCVSISIPEGKTHVNDNN 219
+IA YL + RDI L VAK DF ++ I +
Sbjct: 149 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGC 205
Query: 220 KVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSS 264
++ ++ PE K+D +SFG LL E+ + + Y S
Sbjct: 206 AML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 249
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Query: 98 FNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDP--NGSQLEPFLMK 155
N I + + NI+ ++ L + +V E++A G+L D + + + Q+
Sbjct: 66 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA----- 120
Query: 156 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKF--FDFCVSISIPEGKT 213
V E A+ +LH S ++ R+IK IL K F FC I+ + K
Sbjct: 121 ---AVCRECLQALEFLH---SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSK- 173
Query: 214 HVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ ++GT ++APE ++ K D++S G + +E++ G+
Sbjct: 174 ----RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 69/167 (41%), Gaps = 22/167 (13%)
Query: 108 SHKNILKFVGCCLETELPILVFEFVACGTL------------ADRIHDPNGSQLEP---- 151
SH+NI+ +G C + L+FE+ G L D I N +LE
Sbjct: 107 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 152 --FLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIP 209
+ L A ++A + +L + V RD+ +L V K DF ++ I
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 210 EGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+V N + ++APE + KSDV+S+G LL E+ +
Sbjct: 224 SDSNYVVRGNARLPV-KWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+VA G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVAGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+VA G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 119 MVMEYVAGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 170
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 225 LGVLIYEMAAG 235
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+VA G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVAGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+VA G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVAGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 21/160 (13%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
V E+V G L I Q+ F H + A EIA + +L S+ I++RD+K
Sbjct: 98 FVMEYVNGGDLMYHIQ-----QVGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKL 149
Query: 187 STILFQEQNVAKFFDFCV-SISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVY 245
++ + K DF + +I +G T GT +IAPE ++ + D +
Sbjct: 150 DNVMLDSEGHIKIADFGMCKENIWDGVT----TKXFCGTPDYIAPEIIAYQPYGKSVDWW 205
Query: 246 SFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSIESN 285
+FG LL E+L G+ + FE +E EL + +E N
Sbjct: 206 AFGVLLYEMLAGQ-----APFEGEDE---DELFQSIMEHN 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+VA G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVAGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+VA G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVAGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+VA G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVAGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E + K DF ++ H +D
Sbjct: 139 QILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLA-------RHTDDEMTGY 188
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 76/184 (41%), Gaps = 17/184 (9%)
Query: 78 DRPISVMKFGG-NLNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGT 136
+R I ++K S + +A Q+ H NI+K + LV E G
Sbjct: 31 ERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGE 90
Query: 137 LADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQN- 195
L D I + F + ++ + YLH IV RD+KP +L + ++
Sbjct: 91 LFDEI-----ILRQKFSEVDAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSR 142
Query: 196 --VAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
+ K DF +S G + +GT +IAPE + +EK DV+S G +L
Sbjct: 143 DALIKIVDFGLSAHFEVG----GKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYI 197
Query: 254 LLTG 257
LL G
Sbjct: 198 LLCG 201
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E + K DF ++ H +D
Sbjct: 135 QILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLA-------RHTDDEMTGY 184
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 21/160 (13%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
V E+V G L I Q+ F H + A EIA + +L S+ I++RD+K
Sbjct: 419 FVMEYVNGGDLMYHIQ-----QVGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKL 470
Query: 187 STILFQEQNVAKFFDFCV-SISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVY 245
++ + K DF + +I +G T GT +IAPE ++ + D +
Sbjct: 471 DNVMLDSEGHIKIADFGMCKENIWDGVT----TKXFCGTPDYIAPEIIAYQPYGKSVDWW 526
Query: 246 SFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSIESN 285
+FG LL E+L G+ + FE +E EL + +E N
Sbjct: 527 AFGVLLYEMLAGQ-----APFEGEDE---DELFQSIMEHN 558
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 111 NILKFVGCCLETELPILVFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIA 165
++++ +G + + ++V E +A G L R N P ++ +++A EIA
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+ +AYL+ ++ V RD+ + K DF ++ I E + K +
Sbjct: 140 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPV 195
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
++APE + SD++SFG +L E+ +
Sbjct: 196 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 19/165 (11%)
Query: 103 FASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM 162
+A+ + +N +K + + E+ TL D IH N +Q ++
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQR----DEYWRLFR 123
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI----------PEGK 212
+I A++Y+H S+ I+ R++KP I E K DF ++ ++ +
Sbjct: 124 QILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 213 THVNDN-NKVIGTFGFIAPEYMS-TANCNEKSDVYSFGALLLELL 255
+DN IGT ++A E + T + NEK D YS G + E +
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV-SISIPEGKTHVNDNNKV 221
EI +A+ YLH SR +V+RDIK ++ + K DF + I +G T
Sbjct: 118 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM----KXF 170
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVR 279
GT ++APE + + D + G ++ E++ G+ Y+ E E L E +R
Sbjct: 171 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 228
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 76/184 (41%), Gaps = 17/184 (9%)
Query: 78 DRPISVMKFGG-NLNSEEYCCFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGT 136
+R I ++K S + +A Q+ H NI+K + LV E G
Sbjct: 48 ERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGE 107
Query: 137 LADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQN- 195
L D I + F + ++ + YLH IV RD+KP +L + ++
Sbjct: 108 LFDEI-----ILRQKFSEVDAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSR 159
Query: 196 --VAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
+ K DF +S G + +GT +IAPE + +EK DV+S G +L
Sbjct: 160 DALIKIVDFGLSAHFEVG----GKMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYI 214
Query: 254 LLTG 257
LL G
Sbjct: 215 LLCG 218
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
EI +A+ YLH SR +V+RDIK ++ + K DF + EG +
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC---KEGISDGATMKTFC 166
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVR 279
GT ++APE + + D + G ++ E++ G+ Y+ E E L E +R
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
EI +A+ YLH SR +V+RDIK ++ + K DF + EG +
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC---KEGISDGATMKXFC 166
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVR 279
GT ++APE + + D + G ++ E++ G+ Y+ E E L E +R
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 111 NILKFVGCCLETELPILVFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIA 165
++++ +G + + ++V E +A G L R N P ++ +++A EIA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+ +AYL+ ++ V RD+ + K DF ++ I E + K +
Sbjct: 141 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE-TAYYRKGGKGLLPV 196
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
++APE + SD++SFG +L E+ +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 118/288 (40%), Gaps = 66/288 (22%)
Query: 71 LYKGFLQDRPISVMKFGGNLNSEEYCCFNCIAFASQM--------SHKNILKFVGCCLET 122
+Y+G +R ++V + C +FA + H N++++ +
Sbjct: 41 VYRGMFDNRDVAVKRI----------LPECFSFADREVQLLRESDEHPNVIRYFCTEKDR 90
Query: 123 ELPILVFEFVACGTLADRIHDPNGSQL--EPFLMKHRLKVAMEIANAVAYLHVGFSRPIV 180
+ + E A TL + + + + L EP + + + + +A+LH S IV
Sbjct: 91 QFQYIAIELCA-ATLQEYVEQKDFAHLGLEP------ITLLQQTTSGLAHLH---SLNIV 140
Query: 181 FRDIKPSTILFQEQNV-----AKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMST 235
RD+KP IL N A DF + + G+ + + V GT G+IAPE +S
Sbjct: 141 HRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLS- 199
Query: 236 ANCNEKS----DVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSIESNSFKEIV 291
+C E D++S G + +++ G F + L R++
Sbjct: 200 EDCKENPTYTVDIFSAGCVFYYVIS-----------EGSHPFGKSLQRQA---------- 238
Query: 292 DPIIVGE---EGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQ 336
I++G + L PEK + +++ EL K ++ Q RP+ V K
Sbjct: 239 -NILLGACSLDCLHPEKHEDVIA-RELIEKMIAMDPQKRPSAKHVLKH 284
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
EI +A+ YLH SR +V+RDIK ++ + K DF + EG +
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC---KEGISDGATMKXFC 166
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVR 279
GT ++APE + + D + G ++ E++ G+ Y+ E E L E +R
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 99 NCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 158
+ +A S + H +I++ +G C + L LV +++ G+L D + G+ L P L+ L
Sbjct: 65 HMLAIGS-LDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGA-LGPQLL---L 118
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS-ISIPEGKTHVND 217
++IA + YL +V R++ +L + + + DF V+ + P+ K +
Sbjct: 119 NWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYS 175
Query: 218 NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
K ++A E + +SDV+S+G + EL+T
Sbjct: 176 EAKT--PIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
EI +A+ YLH SR +V+RDIK ++ + K DF + EG +
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC---KEGISDGATMKTFC 166
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVR 279
GT ++APE + + D + G ++ E++ G+ Y+ E E L E +R
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 98 FNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD-----RIHDPNGSQLEPF 152
FNC ++++ +G + + +++ E + G L R N L P
Sbjct: 79 FNC---------HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 129
Query: 153 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK 212
+ +++A EIA+ +AYL+ + V RD+ + E K DF ++ I E
Sbjct: 130 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE-T 185
Query: 213 THVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ K + +++PE + SDV+SFG +L E+ T
Sbjct: 186 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
EI +A+ YLH SR +V+RDIK ++ + K DF + EG +
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC---KEGISDGATMKXFC 166
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVR 279
GT ++APE + + D + G ++ E++ G+ Y+ E E L E +R
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 98 FNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD-----RIHDPNGSQLEPF 152
FNC ++++ +G + + +++ E + G L R N L P
Sbjct: 72 FNC---------HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 153 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK 212
+ +++A EIA+ +AYL+ + V RD+ + E K DF ++ I E
Sbjct: 123 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE-T 178
Query: 213 THVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ K + +++PE + SDV+SFG +L E+ T
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 99 NCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 158
+ +A S + H +I++ +G C + L LV +++ G+L D + G+ L P L+ L
Sbjct: 83 HMLAIGS-LDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGA-LGPQLL---L 136
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS-ISIPEGKTHVND 217
++IA + YL +V R++ +L + + + DF V+ + P+ K +
Sbjct: 137 NWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYS 193
Query: 218 NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
K ++A E + +SDV+S+G + EL+T
Sbjct: 194 EAKT--PIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
EI +A+ YLH SR +V+RDIK ++ + K DF + EG +
Sbjct: 116 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC---KEGISDGATMKTFC 169
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVR 279
GT ++APE + + D + G ++ E++ G+ Y+ E E L E +R
Sbjct: 170 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 226
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+VA G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVAGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
++ +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLIIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIIISKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+V G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVPGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q K DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIKVADFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+VA G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 139 MVMEYVAGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 190
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G T + GT ++APE + + N+ D ++
Sbjct: 191 ENLLIDQQGYIQVTDFGFAKRV-KGATWT-----LCGTPEYLAPEIILSKGYNKAVDWWA 244
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 245 LGVLIYEMAAG 255
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
Q+ + I++ +G C E E +LV E G L + Q K+ +++ +++
Sbjct: 74 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ-----QNRHVKDKNIIELVHQVS 127
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+ YL V RD+ +L Q+ AK DF +S ++ + +
Sbjct: 128 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 184
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV+SFG L+ E +
Sbjct: 185 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
Q+ + I++ +G C E E +LV E G L + Q K+ +++ +++
Sbjct: 62 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ-----QNRHVKDKNIIELVHQVS 115
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+ YL V RD+ +L Q+ AK DF +S ++ + +
Sbjct: 116 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 172
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV+SFG L+ E +
Sbjct: 173 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
Q+ + I++ +G C E E +LV E G L + Q K+ +++ +++
Sbjct: 64 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ-----QNRHVKDKNIIELVHQVS 117
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+ YL V RD+ +L Q+ AK DF +S ++ + +
Sbjct: 118 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 174
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV+SFG L+ E +
Sbjct: 175 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 69/167 (41%), Gaps = 23/167 (13%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNG-----SQLEPFLMK 155
IA + HKNI++++G E + E V G+L+ + G Q F K
Sbjct: 70 IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK 129
Query: 156 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQE-QNVAKFFDFCVSISIPEGKTH 214
+I + YLH IV RDIK +L V K DF S +
Sbjct: 130 -------QILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL----AG 175
Query: 215 VND-NNKVIGTFGFIAPEYMSTA--NCNEKSDVYSFGALLLELLTGK 258
+N GT ++APE + + +D++S G ++E+ TGK
Sbjct: 176 INPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 144 QILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGY 193
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 233
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 98 FNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD-----RIHDPNGSQLEPF 152
FNC ++++ +G + + +++ E + G L R N L P
Sbjct: 78 FNC---------HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 128
Query: 153 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK 212
+ +++A EIA+ +AYL+ + V RD+ + E K DF ++ I E
Sbjct: 129 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE-T 184
Query: 213 THVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ K + +++PE + SDV+SFG +L E+ T
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
Q+ + I++ +G C E E +LV E G L + Q K+ +++ +++
Sbjct: 84 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ-----QNRHVKDKNIIELVHQVS 137
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+ YL V RD+ +L Q+ AK DF +S ++ + +
Sbjct: 138 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 194
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV+SFG L+ E +
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
Q+ + I++ +G C E E +LV E G L + Q K+ +++ +++
Sbjct: 84 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ-----QNRHVKDKNIIELVHQVS 137
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+ YL V RD+ +L Q+ AK DF +S ++ + +
Sbjct: 138 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 194
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV+SFG L+ E +
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
Q+ + I++ +G C E E +LV E G L + Q K+ +++ +++
Sbjct: 68 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ-----QNRHVKDKNIIELVHQVS 121
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+ YL V RD+ +L Q+ AK DF +S ++ + +
Sbjct: 122 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 178
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV+SFG L+ E +
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
Q+ + I++ +G C E E +LV E G L + Q K+ +++ +++
Sbjct: 82 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ-----QNRHVKDKNIIELVHQVS 135
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+ YL V RD+ +L Q+ AK DF +S ++ + +
Sbjct: 136 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 192
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV+SFG L+ E +
Sbjct: 193 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 32/239 (13%)
Query: 111 NILKFVGCCLETELPILVFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIA 165
++++ +G + + ++V E +A G L R N P ++ +++A EIA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+ +AYL+ ++ V RD+ + K DF ++ I E + K +
Sbjct: 141 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPV 196
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSIESN 285
++APE + SD++SFG +L E+ +S E + E V K +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEI--------TSLAEQPYQGLSNEQVLKFVMDG 248
Query: 286 SFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLR-QLHKS 343
+ + D PE+ T+L C + + RPT +++ L+ LH S
Sbjct: 249 GYLDQPDNC--------PER------VTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPS 293
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 98 FNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD-----RIHDPNGSQLEPF 152
FNC ++++ +G + + +++ E + G L R N L P
Sbjct: 76 FNC---------HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 126
Query: 153 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK 212
+ +++A EIA+ +AYL+ + V RD+ + E K DF ++ I E
Sbjct: 127 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE-T 182
Query: 213 THVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ K + +++PE + SDV+SFG +L E+ T
Sbjct: 183 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 98 FNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHD-----PNGSQLEPF 152
FNC ++++ +G + + +++ E + G L + N L P
Sbjct: 75 FNC---------HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 125
Query: 153 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK 212
+ +++A EIA+ +AYL+ + V RD+ + E K DF ++ I E
Sbjct: 126 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE-T 181
Query: 213 THVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ K + +++PE + SDV+SFG +L E+ T
Sbjct: 182 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 22/163 (13%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
+ Q+ H NI K + LV E G L D I + F ++
Sbjct: 77 VQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARI 131
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVA---KFFDFCVSISIPEGKTHVND 217
++ + + Y H IV RD+KP +L + ++ + DF +S TH
Sbjct: 132 IRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEA 181
Query: 218 NNKV---IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ K IGT +IAPE + +EK DV+S G +L LL+G
Sbjct: 182 SKKXKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGY 182
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 222 IGTFGFIAPEYMSTA-NCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M A + N+ D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 138 QILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGY 187
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 138 QILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGY 187
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 98 FNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD-----RIHDPNGSQLEPF 152
FNC ++++ +G + + +++ E + G L R N L P
Sbjct: 107 FNC---------HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 157
Query: 153 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK 212
+ +++A EIA+ +AYL+ + V RD+ + E K DF ++ I E
Sbjct: 158 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE-T 213
Query: 213 THVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ K + +++PE + SDV+SFG +L E+ T
Sbjct: 214 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+VA G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVAGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ ++ G
Sbjct: 224 LGVLIYQMAAG 234
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 12/121 (9%)
Query: 144 PNGSQLEPFLMKHRLK------VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVA 197
P G + + + RL V +I +AVAY+H S+ RD+KP +LF E +
Sbjct: 91 PGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKL 147
Query: 198 KFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLT 256
K DF + P+G + G+ + APE + + ++DV+S G LL L+
Sbjct: 148 KLIDFGLCAK-PKGNKDYHLQT-CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMC 205
Query: 257 G 257
G
Sbjct: 206 G 206
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 98 FNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD-----RIHDPNGSQLEPF 152
FNC ++++ +G + + +++ E + G L R N L P
Sbjct: 78 FNC---------HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 128
Query: 153 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK 212
+ +++A EIA+ +AYL+ + V RD+ + E K DF ++ I E
Sbjct: 129 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE-T 184
Query: 213 THVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ K + +++PE + SDV+SFG +L E+ T
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Query: 111 NILKFVGCCLETELPILVFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIA 165
++++ +G + + ++V E +A G L R N P ++ +++A EIA
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+ +AYL+ ++ V RD+ + K DF ++ I E K +
Sbjct: 138 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE-TDXXRKGGKGLLPV 193
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
++APE + SD++SFG +L E+ +
Sbjct: 194 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 98 FNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD-----RIHDPNGSQLEPF 152
FNC ++++ +G + + +++ E + G L R N L P
Sbjct: 85 FNC---------HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 135
Query: 153 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK 212
+ +++A EIA+ +AYL+ + V RD+ + E K DF ++ I E
Sbjct: 136 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE-T 191
Query: 213 THVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ K + +++PE + SDV+SFG +L E+ T
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 98 FNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHD-----PNGSQLEPF 152
FNC ++++ +G + + +++ E + G L + N L P
Sbjct: 85 FNC---------HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 135
Query: 153 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK 212
+ +++A EIA+ +AYL+ + V RD+ + E K DF ++ I E
Sbjct: 136 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE-T 191
Query: 213 THVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ K + +++PE + SDV+SFG +L E+ T
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 18/164 (10%)
Query: 98 FNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD-----RIHDPNGSQLEPF 152
FNC ++++ +G + + +++ E + G L R N L P
Sbjct: 70 FNC---------HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 120
Query: 153 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK 212
+ +++A EIA+ +AYL+ + V RD+ + E K DF ++ I E
Sbjct: 121 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE-T 176
Query: 213 THVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
K + +++PE + SDV+SFG +L E+ T
Sbjct: 177 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Query: 111 NILKFVGCCLETELPILVFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIA 165
++++ +G + + ++V E +A G L R N P ++ +++A EIA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+ +AYL+ ++ V RD+ + K DF ++ I E K +
Sbjct: 141 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX-XRKGGKGLLPV 196
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
++APE + SD++SFG +L E+ +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 18/164 (10%)
Query: 98 FNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD-----RIHDPNGSQLEPF 152
FNC ++++ +G + + +++ E + G L R N L P
Sbjct: 79 FNC---------HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 129
Query: 153 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK 212
+ +++A EIA+ +AYL+ + V RD+ + E K DF ++ I E
Sbjct: 130 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE-T 185
Query: 213 THVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
K + +++PE + SDV+SFG +L E+ T
Sbjct: 186 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + + +LH R I++RD+KP +L + + D +++ + G+T
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK---TKGYA 350
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
GT GF+APE + + D ++ G L E++ +
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + + +LH R I++RD+KP +L + + D +++ + G+T
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK---TKGYA 350
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
GT GF+APE + + D ++ G L E++ +
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + + +LH R I++RD+KP +L + + D +++ + G+T
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK---TKGYA 350
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
GT GF+APE + + D ++ G L E++ +
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLK 159
+ Q H NI++ G +++ ++V E++ G+L R HD + ++ M +
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 128
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI---PEGKTHVN 216
M+ + + Y+H RD+ IL V K DF +S + PE +
Sbjct: 129 SGMKYLSDMGYVH---------RDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTT 178
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT-GKR 259
K+ + +PE ++ SDV+S+G +L E+++ G+R
Sbjct: 179 RGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 220
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLK 159
+ Q H NI++ G +++ ++V E++ G+L R HD + ++ M +
Sbjct: 86 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 145
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI---PEGKTHVN 216
M+ + + Y+H RD+ IL V K DF +S + PE +
Sbjct: 146 SGMKYLSDMGYVH---------RDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTT 195
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT-GKR 259
K+ + +PE ++ SDV+S+G +L E+++ G+R
Sbjct: 196 RGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 237
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Query: 111 NILKFVGCCLETELPILVFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIA 165
++++ +G + + ++V E +A G L R N P ++ +++A EIA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+ +AYL+ ++ V RD+ + K DF ++ I E K +
Sbjct: 141 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE-TDXXRKGGKGLLPV 196
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
++APE + SD++SFG +L E+ +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + + +LH R I++RD+KP +L + + D +++ + G+T
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK---TKGYA 350
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
GT GF+APE + + D ++ G L E++ +
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+V G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVPGGEMFSHLR-----RIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 69/167 (41%), Gaps = 23/167 (13%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNG-----SQLEPFLMK 155
IA + HKNI++++G E + E V G+L+ + G Q F K
Sbjct: 56 IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK 115
Query: 156 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQE-QNVAKFFDFCVSISIPEGKTH 214
+I + YLH IV RDIK +L V K DF S +
Sbjct: 116 -------QILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL----AG 161
Query: 215 VND-NNKVIGTFGFIAPEYMSTA--NCNEKSDVYSFGALLLELLTGK 258
+N GT ++APE + + +D++S G ++E+ TGK
Sbjct: 162 INPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+V G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVPGGEMFSHLR-----RIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+V G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 111 MVMEYVPGGEMFSHLR-----RIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 162
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 163 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 216
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 217 LGVLIYEMAAG 227
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+V G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 119 MVMEYVPGGEMFSHLR-----RIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 170
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 225 LGVLIYEMAAG 235
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 154 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKT 213
++H + + ++A + +L SR + RD+ IL E+NV K DF ++ I +
Sbjct: 190 LEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 246
Query: 214 HVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+V + + ++APE + +SDV+SFG LL E+ +
Sbjct: 247 YVRKGDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLK 159
+ Q H NI++ G +++ ++V E++ G+L R HD + ++ M +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI---PEGKTHVN 216
M+ + + Y+H RD+ IL V K DF +S + PE +
Sbjct: 158 SGMKYLSDMGYVH---------RDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTT 207
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT-GKR 259
K+ + +PE ++ SDV+S+G +L E+++ G+R
Sbjct: 208 RGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 154 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKT 213
++H + + ++A + +L SR + RD+ IL E+NV K DF ++ I +
Sbjct: 192 LEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248
Query: 214 HVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+V + + ++APE + +SDV+SFG LL E+ +
Sbjct: 249 YVRKGDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+V G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 119 MVMEYVPGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 170
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRV-KGRTWT-----LCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 225 LGVLIYEMAAG 235
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 154 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKT 213
++H + + ++A + +L SR + RD+ IL E+NV K DF ++ I +
Sbjct: 197 LEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 253
Query: 214 HVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+V + + ++APE + +SDV+SFG LL E+ +
Sbjct: 254 YVRKGDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
V E+V G L I Q+ F + A EI+ + +LH R I++RD+K
Sbjct: 97 FVMEYVNGGDLMYHIQ-----QVGKFKEPQAVFYAAEISIGLFFLH---KRGIIYRDLKL 148
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDN---NKVIGTFGFIAPEYMSTANCNEKSD 243
++ + K DF + K H+ D + GT +IAPE ++ + D
Sbjct: 149 DNVMLDSEGHIKIADFGMC------KEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVD 202
Query: 244 VYSFGALLLELLTGK 258
+++G LL E+L G+
Sbjct: 203 WWAYGVLLYEMLAGQ 217
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 19/161 (11%)
Query: 101 IAFASQMSHKNILKFVGC-CLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK 159
I + H NI+K + E L IL+ EF A G + D +LE L + +++
Sbjct: 85 IDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAV-----DAVMLELERPLTESQIQ 138
Query: 160 VA-MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
V + +A+ YLH I+ RD+K ILF K DF VS + +
Sbjct: 139 VVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRXIQRR 192
Query: 219 NKVIGTFGFIAPEYMSTANCNE-----KSDVYSFGALLLEL 254
+ IGT ++APE + + K+DV+S G L+E+
Sbjct: 193 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
Q+ + I++ +G C E E +LV E G L + Q K+ +++ +++
Sbjct: 426 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ-----QNRHVKDKNIIELVHQVS 479
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+ YL V RD+ +L Q+ AK DF +S ++ + +
Sbjct: 480 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 536
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV+SFG L+ E +
Sbjct: 537 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
Q+ + I++ +G C E E +LV E G L + Q K+ +++ +++
Sbjct: 427 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ-----QNRHVKDKNIIELVHQVS 480
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+ YL V RD+ +L Q+ AK DF +S ++ + +
Sbjct: 481 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 537
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV+SFG L+ E +
Sbjct: 538 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLADRIH--------DPNGSQLEPFL-MKHRLK 159
H+NI+ +G C +++ E+ G L + + DP + L + L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH 168
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNN 219
+ ++A +A+L S+ + RD+ +L +VAK DF ++ I +ND+N
Sbjct: 169 FSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI------MNDSN 219
Query: 220 KVIG-----TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL 274
++ ++APE + +SDV+S+G LL E+ + Y N + Y L
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 279
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 154 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKT 213
++H + + ++A + +L SR + RD+ IL E+NV K DF ++ I +
Sbjct: 199 LEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 255
Query: 214 HVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+V + + ++APE + +SDV+SFG LL E+ +
Sbjct: 256 YVRKGDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 19/161 (11%)
Query: 101 IAFASQMSHKNILKFVGC-CLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK 159
I + H NI+K + E L IL+ EF A G + D +LE L + +++
Sbjct: 85 IDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAV-----DAVMLELERPLTESQIQ 138
Query: 160 VA-MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
V + +A+ YLH I+ RD+K ILF K DF VS + +
Sbjct: 139 VVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRTIQRR 192
Query: 219 NKVIGTFGFIAPEYMSTANCNE-----KSDVYSFGALLLEL 254
+ IGT ++APE + + K+DV+S G L+E+
Sbjct: 193 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E + K DF + H +D
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLC-------RHTDDEMTGY 182
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLK 159
+ Q H NI++ G +++ ++V E++ G+L R HD + ++ M +
Sbjct: 96 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 155
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI---PEGKTHVN 216
M+ + + Y+H RD+ IL V K DF +S + PE +
Sbjct: 156 SGMKYLSDMGYVH---------RDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTT 205
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT-GKR 259
K+ + +PE ++ SDV+S+G +L E+++ G+R
Sbjct: 206 RGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 247
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 19/161 (11%)
Query: 101 IAFASQMSHKNILKFVGC-CLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK 159
I + H NI+K + E L IL+ EF A G + D +LE L + +++
Sbjct: 85 IDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAV-----DAVMLELERPLTESQIQ 138
Query: 160 VA-MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
V + +A+ YLH I+ RD+K ILF K DF VS + +
Sbjct: 139 VVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRXIQRR 192
Query: 219 NKVIGTFGFIAPEYMSTANCNE-----KSDVYSFGALLLEL 254
+ IGT ++APE + + K+DV+S G L+E+
Sbjct: 193 DXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLK 159
+ Q H NI++ G +++ ++V E++ G+L R HD + ++ M +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI---PEGKTHVN 216
M+ + + Y+H RD+ IL V K DF +S + PE +
Sbjct: 158 SGMKYLSDMGYVH---------RDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTT 207
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT-GKR 259
K+ + +PE ++ SDV+S+G +L E+++ G+R
Sbjct: 208 RGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLK 159
+ Q H NI++ G +++ ++V E++ G+L R HD + ++ M +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI---PEGKTHVN 216
M+ + + Y+H RD+ IL V K DF +S + PE +
Sbjct: 158 SGMKYLSDMGYVH---------RDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTT 207
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT-GKR 259
K+ + +PE ++ SDV+S+G +L E+++ G+R
Sbjct: 208 RGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 24/167 (14%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLK 159
+ Q H NI++ G +++ ++V E++ G+L R HD + ++ M +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNN 219
M+ + + Y+H RD+ IL V K DF + G+ +D
Sbjct: 158 SGMKYLSDMGYVH---------RDLAARNILINSNLVCKVSDFGL------GRVLEDDPE 202
Query: 220 KVIGTFG------FIAPEYMSTANCNEKSDVYSFGALLLELLT-GKR 259
T G + +PE ++ SDV+S+G +L E+++ G+R
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 16/156 (10%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRI--HDPNGSQLEPFLMKHRLKVAMEI 164
+ H NI+K + +V E G L +RI G L + +K M
Sbjct: 77 LDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMM-- 134
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQE---QNVAKFFDFCVSISIPEGKTHVNDNNKV 221
NA+AY H S+ +V +D+KP ILFQ+ + K DF ++ + N
Sbjct: 135 -NALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTN----A 186
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
GT ++APE + K D++S G ++ LLTG
Sbjct: 187 AGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTG 221
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E++ G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYMPGGDMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q K DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIKVADFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLK 159
+ Q H NI++ G +++ ++V E++ G+L R HD + ++ M +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI---PEGKTHVN 216
M+ + + Y+H RD+ IL V K DF +S + PE +
Sbjct: 158 SGMKYLSDMGYVH---------RDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTT 207
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT-GKR 259
K+ + +PE ++ SDV+S+G +L E+++ G+R
Sbjct: 208 RGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 99/246 (40%), Gaps = 37/246 (15%)
Query: 71 LYKGFLQDRPISVMKFGGNLNSEE---YCCFNCIAFASQMSHKNILKFVGCCLETELPIL 127
+YKG + + V L+SEE I+ ++ H+NI++ L
Sbjct: 21 VYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTL 80
Query: 128 VFEFVACGT---LADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDI 184
VFEF+ + R LE L+K+ ++ +A+ H I+ RD+
Sbjct: 81 VFEFMDNDLKKYMDSRTVGNTPRGLELNLVKY---FQWQLLQGLAFCH---ENKILHRDL 134
Query: 185 KPSTILFQEQNVAKFFDFCVS--ISIPEGKTHVNDNNKVIGTFGFIAPE-YMSTANCNEK 241
KP +L ++ K DF ++ IP VN + + T + AP+ M + +
Sbjct: 135 KPQNLLINKRGQLKLGDFGLARAFGIP-----VNTFSSEVVTLWYRAPDVLMGSRTYSTS 189
Query: 242 SDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSIESNSFKEIVDPIIVGEEGL 301
D++S G +L E++TGK + + N EE K I D + E L
Sbjct: 190 IDIWSCGCILAEMITGKPLFPGT---NDEE--------------QLKLIFDIMGTPNESL 232
Query: 302 WPEKEK 307
WP K
Sbjct: 233 WPSVTK 238
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E++ G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYMPGGDMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q K DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIKVADFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+V G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 139 MVMEYVPGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 190
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 191 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 244
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 245 LGVLIYEMAAG 255
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+V G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 104 MVMEYVPGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 155
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 156 ENLLIDQQGYIQVTDFGFAKRV-KGRTWT-----LCGTPEYLAPEIILSKGYNKAVDWWA 209
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 210 LGVLIYEMAAG 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 144 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 193
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 233
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+V G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVPGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+V G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVPGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+V G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVPGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+V G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 119 MVMEYVPGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 170
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 225 LGVLIYEMAAG 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+V G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 119 MVMEYVPGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 170
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 225 LGVLIYEMAAG 235
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+V G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVPGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 139 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 188
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+V G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 119 MVMEYVPGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 170
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 225 LGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+V G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 119 MVMEYVPGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 170
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 225 LGVLIYEMAAG 235
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 153 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 202
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 18/164 (10%)
Query: 98 FNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD-----RIHDPNGSQLEPF 152
FNC ++++ +G + + +++ E + G L R N L P
Sbjct: 72 FNC---------HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 153 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK 212
+ +++A EIA+ +AYL+ + V RD+ E K DF ++ I E
Sbjct: 123 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE-T 178
Query: 213 THVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ K + +++PE + SDV+SFG +L E+ T
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+V G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVPGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+V G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVPGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 145 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 194
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 156 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 205
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 245
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 145 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 194
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+V G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 111 MVMEYVPGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 162
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 163 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 216
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 217 LGVLIYEMAAG 227
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 145 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 194
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 9/151 (5%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
Q+ + I++ +G C E E +LV E G L + Q K+ +++ +++
Sbjct: 68 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ-----QNRHVKDKNIIELVHQVS 121
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+ YL V RD+ +L Q+ AK DF +S ++ +
Sbjct: 122 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPV 178
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ APE ++ + KSDV+SFG L+ E +
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 135 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 184
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 153 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 202
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGX 182
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 152 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 201
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 241
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 152 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 201
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 241
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 135 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 184
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 135 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 184
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 138 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 187
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 132 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 181
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 182 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 221
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+VA G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVAGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT +APE + + N+ D ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEALAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 143 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 192
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 193 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 232
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 139 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 188
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 140 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 189
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLA-------RHTDDEMTGY 182
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 139 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 188
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+ G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 119 MVLEYAPGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 170
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q K DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 171 ENLLIDQQGYIKVADFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 225 LGVLIYEMAAG 235
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 22/157 (14%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAV 168
H NI+K + LV E + G L +RI + + F + ++ +AV
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERI-----KKKKHFSETEASYIMRKLVSAV 119
Query: 169 AYLH-VGFSRPIVFRDIKPSTILFQEQN---VAKFFDFCVSISIPEGKTHVNDNNKVIG- 223
+++H VG +V RD+KP +LF ++N K DF + P DN +
Sbjct: 120 SHMHDVG----VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP------DNQPLKTP 169
Query: 224 --TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
T + APE ++ +E D++S G +L +L+G+
Sbjct: 170 CFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
+ +A A H+ + I+ RDIKPS IL K DF +S + + D
Sbjct: 130 ITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD---- 185
Query: 222 IGTFGFIAPEYMSTANCNE----KSDVYSFGALLLELLTGK 258
G ++APE + + + +SDV+S G L EL TG+
Sbjct: 186 AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+ G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYAPGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
++ +Q K DF ++ + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLMIDQQGYIKVTDFGLAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 138 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 187
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+VA G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYVAGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
+L +Q + DF + + +G+T + GT ++AP + + N+ D ++
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPAIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 130 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 179
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 219
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 153 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMXGX 202
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+ G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYAPGGEMFSHLR-----RIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
++ +Q K DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLMIDQQGYIKVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 130 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 179
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 219
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 131 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 180
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 220
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 15/155 (9%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
++ H NI++ E LVF+ V G L + I E + +I
Sbjct: 84 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI-----VAREFYSEADASHCIQQIL 138
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQN---VAKFFDFCVSISIPEGKTHVNDNNKVI 222
++AY H S IV R++KP +L + K DF ++I + + + +
Sbjct: 139 ESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW----HGFA 191
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
GT G+++PE + ++ D+++ G +L LL G
Sbjct: 192 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 178
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+ G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 119 MVMEYAPGGEMFSHLR-----RIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 170
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
++ +Q K DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 225 LGVLIYEMAAG 235
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 178
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 178
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 15/155 (9%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
++ H NI++ E LVF+ V G L + I E + +I
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI-----VAREFYSEADASHCIQQIL 115
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQN---VAKFFDFCVSISIPEGKTHVNDNNKVI 222
++AY H S IV R++KP +L + K DF ++I + + + +
Sbjct: 116 ESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW----HGFA 168
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
GT G+++PE + ++ D+++ G +L LL G
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 15/155 (9%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
++ H NI++ E LVF+ V G L + I E + +I
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI-----VAREFYSEADASHCIQQIL 115
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQN---VAKFFDFCVSISIPEGKTHVNDNNKVI 222
++AY H S IV R++KP +L + K DF ++I + + + +
Sbjct: 116 ESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW----HGFA 168
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
GT G+++PE + ++ D+++ G +L LL G
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 156 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMXGY 205
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 245
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I+ ++H++++ F G + + +V E +L + +H + EP ++ L+
Sbjct: 66 ISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEP-EARYYLR- 122
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
+I YLH ++ RD+K + E K DF ++ + + + K
Sbjct: 123 --QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV----EYDGERKK 173
Query: 221 VI-GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFE 267
V+ GT +IAPE +S + + DV+S G ++ LL GK +SC +
Sbjct: 174 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK 221
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I+ ++H++++ F G + + +V E +L + +H + EP ++ L+
Sbjct: 92 ISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEP-EARYYLR- 148
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
+I YLH ++ RD+K + E K DF ++ + + + K
Sbjct: 149 --QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV----EYDGERKK 199
Query: 221 VI-GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFE 267
V+ GT +IAPE +S + + DV+S G ++ LL GK +SC +
Sbjct: 200 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK 247
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 15/155 (9%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
++ H NI++ E LVF+ V G L + I E + +I
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI-----VAREFYSEADASHCIQQIL 114
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQN---VAKFFDFCVSISIPEGKTHVNDNNKVI 222
++AY H S IV R++KP +L + K DF ++I + + + +
Sbjct: 115 ESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW----HGFA 167
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
GT G+++PE + ++ D+++ G +L LL G
Sbjct: 168 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 17/160 (10%)
Query: 97 CFNCIAFASQMSHKNILKFVGCCLET--ELPILVFEFVACGTLADRIHDPNGSQLEPFLM 154
+ IA ++ H N++K V + + +VFE V G + + L+P
Sbjct: 83 VYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV------PTLKPLSE 136
Query: 155 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTH 214
++ + YLH + I+ RDIKPS +L E K DF VS +G
Sbjct: 137 DQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KGSDA 192
Query: 215 VNDNNKVIGTFGFIAPEYMSTAN---CNEKSDVYSFGALL 251
+ N +GT F+APE +S + DV++ G L
Sbjct: 193 LLSNT--VGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I+ ++H++++ F G + + +V E +L + +H + EP ++ L+
Sbjct: 90 ISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEP-EARYYLR- 146
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
+I YLH ++ RD+K + E K DF ++ + + + K
Sbjct: 147 --QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV----EYDGERKK 197
Query: 221 VI-GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFE 267
V+ GT +IAPE +S + + DV+S G ++ LL GK +SC +
Sbjct: 198 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK 245
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I+ ++ H NI+ + LVFEF+ ++ D N + L+ +K L
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQDSQIKIYL-- 125
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVNDN 218
++ VA+ H I+ RD+KP +L K DF + + IP V
Sbjct: 126 -YQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP-----VRSY 176
Query: 219 NKVIGTFGFIAPE-YMSTANCNEKSDVYSFGALLLELLTGK 258
+ T + AP+ M + + D++S G + E++TGK
Sbjct: 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLK 159
+ Q H NI++ G +++ ++V E++ G+L R HD F + +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------FTVIQLVG 151
Query: 160 VAMEIANAVAYL-HVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI---PEGKTHV 215
+ IA+ + YL +GF V RD+ IL V K DF +S + PE +
Sbjct: 152 MLRGIASGMKYLSDMGF----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYT 206
Query: 216 NDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT-GKR 259
K+ + +PE ++ SDV+S+G +L E+++ G+R
Sbjct: 207 TRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK-V 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMAGF 182
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK-V 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMAGF 182
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I+ ++ H NI+ + LVFEF+ ++ D N + L+ +K L
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQDSQIKIYL-- 125
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVNDN 218
++ VA+ H I+ RD+KP +L K DF + + IP V
Sbjct: 126 -YQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP-----VRSY 176
Query: 219 NKVIGTFGFIAPE-YMSTANCNEKSDVYSFGALLLELLTGK 258
+ T + AP+ M + + D++S G + E++TGK
Sbjct: 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLK 159
+ Q H NI++ G +++ ++V E++ G+L R HD + ++ M +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI---PEGKTHVN 216
M+ + + Y+H RD+ IL V K DF ++ + PE +
Sbjct: 158 SGMKYLSDMGYVH---------RDLAARNILINSNLVCKVSDFGLARVLEDDPEA-AYTT 207
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT-GKR 259
K+ + +PE ++ SDV+S+G +L E+++ G+R
Sbjct: 208 RGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+ G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 119 MVMEYAPGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 170
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
++ +Q K DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 225 LGVLIYEMAAG 235
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S I+ RD+KPS + E K DF ++ + ++ +
Sbjct: 140 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA------RHTADEMTGYV 190
Query: 223 GTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S I+ RD+KPS + E K DF ++ + ++ +
Sbjct: 140 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA------RHTADEMTGYV 190
Query: 223 GTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAV 168
H NI+ + + +V E + G L D+I + + F + V I V
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKI-----LRQKFFSEREASAVLFTITKTV 129
Query: 169 AYLHVGFSRPIVFRDIKPSTILFQEQN----VAKFFDFCVSISIPEGKTHVNDNNKVIG- 223
YLH ++ +V RD+KPS IL+ +++ + DF + K +N ++
Sbjct: 130 EYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFA------KQLRAENGLLMTP 180
Query: 224 --TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKS 281
T F+APE + + D++S G LL +LTG + F NG + +E++ +
Sbjct: 181 CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG-----YTPFANGPDDTPEEILAR- 234
Query: 282 IESNSF 287
I S F
Sbjct: 235 IGSGKF 240
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 111 NILKFVGCCLETELPILVFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIA 165
++++ +G + + ++V E +A G L R N P ++ +++A EIA
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+ +AYL+ ++ V R++ + K DF ++ I E + K +
Sbjct: 142 DGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPV 197
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
++APE + SD++SFG +L E+ +
Sbjct: 198 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 111 NILKFVGCCLETELPILVFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIA 165
++++ +G + + ++V E +A G L R N P ++ +++A EIA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTF 225
+ +AYL+ ++ V R++ + K DF ++ I E + K +
Sbjct: 141 DGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPV 196
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
++APE + SD++SFG +L E+ +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+ G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 119 MVMEYAPGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 170
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
++ +Q K DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 225 LGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+ G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYAPGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
++ +Q K DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLMIDQQGYIKVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 18/164 (10%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLK 159
+ Q H NI++ G +++ ++V E + G+L R HD + ++ M +
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 128
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI---PEGKTHVN 216
M+ + + Y+H RD+ IL V K DF +S + PE +
Sbjct: 129 SGMKYLSDMGYVH---------RDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTT 178
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT-GKR 259
K+ + +PE ++ SDV+S+G +L E+++ G+R
Sbjct: 179 RGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S I+ RD+KPS + E K DF ++ + ++ +
Sbjct: 140 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA------RHTADEMTGYV 190
Query: 223 GTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+ G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 119 MVMEYAPGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 170
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
++ +Q K DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 225 LGVLIYEMAAG 235
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK-V 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMAGF 178
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 73/178 (41%), Gaps = 26/178 (14%)
Query: 98 FNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDP------------- 144
FN + Q++H +++K G C + +L+ E+ G+L + +
Sbjct: 77 FNVL---KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 145 ------NGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAK 198
+ M + A +I+ + YL +V RD+ IL E K
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMK 190
Query: 199 FFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
DF +S + E ++V + I ++A E + +SDV+SFG LL E++T
Sbjct: 191 ISDFGLSRDVYEEDSYVKRSQGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K D+ ++ H +D
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLA-------RHTDDEMTGY 182
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 12/158 (7%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLKVAM 162
Q H N++ G + ++V EF+ G L R HD + ++ M + M
Sbjct: 99 GQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGM 158
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+ Y+H RD+ IL V K DF +S I + V
Sbjct: 159 RYLADMGYVH---------RDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGK 209
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT-GKR 259
+ APE + SDV+S+G ++ E+++ G+R
Sbjct: 210 IPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER 247
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 63/164 (38%), Gaps = 28/164 (17%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLM-----------KHR 157
H NI+ +G C L E+ G L D + + +P +
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
L A ++A + YL + + RD+ IL E VAK DF +S
Sbjct: 145 LHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLS---------RGQ 192
Query: 218 NNKVIGTFGFIAPEYMSTANCN-----EKSDVYSFGALLLELLT 256
V T G + +M+ + N SDV+S+G LL E+++
Sbjct: 193 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 14/162 (8%)
Query: 99 NCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 158
N + Q+ H +IL+ ++ LV E G + + + +++PF
Sbjct: 60 NEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN----RVKPFSENEAR 115
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS--ISIPEGKTHVN 216
+I + YLH S I+ RD+ S +L K DF ++ + +P K +
Sbjct: 116 HFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT- 171
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ GT +I+PE + + +SDV+S G + LL G+
Sbjct: 172 ----LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 94/243 (38%), Gaps = 37/243 (15%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLM-----------KHR 157
H NI+ +G C L E+ G L D + + +P +
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
L A ++A + YL + + RD+ IL E VAK DF +S
Sbjct: 135 LHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLS---------RGQ 182
Query: 218 NNKVIGTFGFIAPEYMSTANCN-----EKSDVYSFGALLLELLTGKRISY--SSCFENGE 270
V T G + +M+ + N SDV+S+G LL E+++ Y +C E E
Sbjct: 183 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE 242
Query: 271 EYFLQELVRKSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTM 330
+ L + R N E+ D + W EK + S+ ++ + L++ ++R T
Sbjct: 243 K--LPQGYRLEKPLNCDDEVYDLM----RQCWREKPYERPSFAQILVS-LNRMLEERKTY 295
Query: 331 VQV 333
V
Sbjct: 296 VNT 298
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 42/213 (19%)
Query: 71 LYKGFLQDRPISVMKFGGNLNSEEYCCFNCIAFASQMSHKNILKFV----GCCLETELP- 125
+YKG L +RP++V F N + + I M H NI +F+ + +
Sbjct: 29 VYKGSLDERPVAVKVFSF-ANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87
Query: 126 ILVFEFVACGTLADRIHDPNGSQLEPFLMKH------RLKVAMEIANAVAYLHVGFSR-- 177
+LV E+ PNGS L +L H ++A + +AYLH R
Sbjct: 88 LLVMEYY-----------PNGS-LXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGD 135
Query: 178 ----PIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEG---KTHVNDNNKV--IGTFGFI 228
I RD+ +L + DF +S+ + + DN + +GT ++
Sbjct: 136 HYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYM 195
Query: 229 APEYMSTA-------NCNEKSDVYSFGALLLEL 254
APE + A + ++ D+Y+ G + E+
Sbjct: 196 APEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 114 KFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHV 173
+ +G CL + + LV + + G L D + + G + L M+IA ++YL
Sbjct: 83 RLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGR----LGSQDLLNWCMQIAKGMSYLE- 136
Query: 174 GFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS--ISIPEGKTHVNDNNKVIGTFGFIAPE 231
+V RD+ +L + N K DF ++ + I E + H D KV ++A E
Sbjct: 137 --DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHA-DGGKV--PIKWMALE 191
Query: 232 YMSTANCNEKSDVYSFGALLLELLT 256
+ +SDV+S+G + EL+T
Sbjct: 192 SILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGS-QLEPFL--------MKHRLK 159
H+NI+ +G C +++ E+ G L + + + + +P + L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH 168
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNN 219
+ ++A +A+L S+ + RD+ +L +VAK DF ++ I +ND+N
Sbjct: 169 FSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI------MNDSN 219
Query: 220 KVIG-----TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFL 274
++ ++APE + +SDV+S+G LL E+ + Y N + Y L
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 279
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 18/164 (10%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLK 159
+ Q H NI++ G +++ ++V E + G+L R HD + ++ M +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI---PEGKTHVN 216
M+ + + Y+H RD+ IL V K DF +S + PE +
Sbjct: 158 SGMKYLSDMGYVH---------RDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTT 207
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT-GKR 259
K+ + +PE ++ SDV+S+G +L E+++ G+R
Sbjct: 208 RGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAV 168
H NI+ + + LV E + G L D+I + + F + V I V
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKI-----LRQKFFSEREASFVLHTIGKTV 134
Query: 169 AYLHVGFSRPIVFRDIKPSTILFQEQN----VAKFFDFCVSISIPEGKTHVNDNNKVIG- 223
YLH S+ +V RD+KPS IL+ +++ + DF + K +N ++
Sbjct: 135 EYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFA------KQLRAENGLLMTP 185
Query: 224 --TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKS 281
T F+APE + +E D++S G LL +L G + F NG +E++ +
Sbjct: 186 CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG-----YTPFANGPSDTPEEILTR- 239
Query: 282 IESNSF 287
I S F
Sbjct: 240 IGSGKF 245
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 13/142 (9%)
Query: 126 ILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIK 185
++V E + G L RI D G Q F + ++ I A+ YLH S I RD+K
Sbjct: 89 LIVMECLDGGELFSRIQD-RGDQA--FTEREASEIMKSIGEAIQYLH---SINIAHRDVK 142
Query: 186 PSTILFQEQN---VAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKS 242
P +L+ + + K DF + E +H N + T ++APE + ++
Sbjct: 143 PENLLYTSKRPNAILKLTDFGFA---KETTSH-NSLTEPCYTPYYVAPEVLGPEKYDKSC 198
Query: 243 DVYSFGALLLELLTGKRISYSS 264
D++S G ++ LL G YS+
Sbjct: 199 DMWSLGVIMYILLCGYPPFYSN 220
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+ G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYAPGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
++ +Q + DF ++ + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLMIDQQGYIQVTDFGLAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 22/158 (13%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
Q+ + I++ +G C + E +LV E G L FL+ R ++ ++
Sbjct: 66 QLDNPYIVRLIGVC-QAEALMLVMEMAG------------GGPLHKFLVGKREEIP--VS 110
Query: 166 NAVAYLH---VGF----SRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
N LH +G + V RD+ +L ++ AK DF +S ++ ++
Sbjct: 111 NVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 170
Query: 219 NKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ + APE ++ + +SDV+S+G + E L+
Sbjct: 171 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAV 168
H NI+ + + LV E + G L D+I + + F + V I V
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKI-----LRQKFFSEREASFVLHTIGKTV 134
Query: 169 AYLHVGFSRPIVFRDIKPSTILFQEQN----VAKFFDFCVSISIPEGKTHVNDNNKVIG- 223
YLH S+ +V RD+KPS IL+ +++ + DF + K +N ++
Sbjct: 135 EYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFA------KQLRAENGLLMTP 185
Query: 224 --TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKS 281
T F+APE + +E D++S G LL +L G + F NG +E++ +
Sbjct: 186 CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG-----YTPFANGPSDTPEEILTR- 239
Query: 282 IESNSF 287
I S F
Sbjct: 240 IGSGKF 245
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 18/155 (11%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAV 168
H +I+ + + LVF+ + G L D + ++ K + + AV
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-----TEKVALSEKETRSIMRSLLEAV 213
Query: 169 AYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFI 228
++LH IV RD+KP IL + + DF S + G+ ++ GT G++
Sbjct: 214 SFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK----LRELCGTPGYL 266
Query: 229 APEYM------STANCNEKSDVYSFGALLLELLTG 257
APE + + ++ D+++ G +L LL G
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K DF ++ H +D
Sbjct: 162 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 211
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N D++S G ++ ELLTG+ +
Sbjct: 212 VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTL 251
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 182 RDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEK 241
RD+KP IL + A DF ++ + + K + +GT + APE S ++ +
Sbjct: 158 RDVKPENILVSADDFAYLVDFGIASATTDEK--LTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 242 SDVYSFGALLLELLTG 257
+D+Y+ +L E LTG
Sbjct: 216 ADIYALTCVLYECLTG 231
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 13/142 (9%)
Query: 126 ILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIK 185
++V E + G L RI D G Q F + ++ I A+ YLH S I RD+K
Sbjct: 96 LIVMECLDGGELFSRIQD-RGDQA--FTEREASEIMKSIGEAIQYLH---SINIAHRDVK 149
Query: 186 PSTILFQEQN---VAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKS 242
P +L+ + + K DF + E +H N T ++APE + ++
Sbjct: 150 PENLLYTSKRPNAILKLTDFGFA---KETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSC 205
Query: 243 DVYSFGALLLELLTGKRISYSS 264
D++S G ++ LL G YS+
Sbjct: 206 DMWSLGVIMYILLCGYPPFYSN 227
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 13/142 (9%)
Query: 126 ILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIK 185
++V E + G L RI D G Q F + ++ I A+ YLH S I RD+K
Sbjct: 91 LIVMECLDGGELFSRIQD-RGDQA--FTEREASEIMKSIGEAIQYLH---SINIAHRDVK 144
Query: 186 PSTILFQEQN---VAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKS 242
P +L+ + + K DF + E +H N T ++APE + ++
Sbjct: 145 PENLLYTSKRPNAILKLTDFGFA---KETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSC 200
Query: 243 DVYSFGALLLELLTGKRISYSS 264
D++S G ++ LL G YS+
Sbjct: 201 DMWSLGVIMYILLCGYPPFYSN 222
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 13/142 (9%)
Query: 126 ILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIK 185
++V E + G L RI D G Q F + ++ I A+ YLH S I RD+K
Sbjct: 97 LIVMECLDGGELFSRIQD-RGDQA--FTEREASEIMKSIGEAIQYLH---SINIAHRDVK 150
Query: 186 PSTILFQEQN---VAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKS 242
P +L+ + + K DF + E +H N T ++APE + ++
Sbjct: 151 PENLLYTSKRPNAILKLTDFGFA---KETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSC 206
Query: 243 DVYSFGALLLELLTGKRISYSS 264
D++S G ++ LL G YS+
Sbjct: 207 DMWSLGVIMYILLCGYPPFYSN 228
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 13/142 (9%)
Query: 126 ILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIK 185
++V E + G L RI D G Q F + ++ I A+ YLH S I RD+K
Sbjct: 141 LIVMECLDGGELFSRIQD-RGDQ--AFTEREASEIMKSIGEAIQYLH---SINIAHRDVK 194
Query: 186 PSTILFQEQN---VAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKS 242
P +L+ + + K DF + E +H N T ++APE + ++
Sbjct: 195 PENLLYTSKRPNAILKLTDFGFA---KETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSC 250
Query: 243 DVYSFGALLLELLTGKRISYSS 264
D++S G ++ LL G YS+
Sbjct: 251 DMWSLGVIMYILLCGYPPFYSN 272
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 13/142 (9%)
Query: 126 ILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIK 185
++V E + G L RI D G Q F + ++ I A+ YLH S I RD+K
Sbjct: 135 LIVMECLDGGELFSRIQD-RGDQA--FTEREASEIMKSIGEAIQYLH---SINIAHRDVK 188
Query: 186 PSTILFQEQN---VAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKS 242
P +L+ + + K DF + E +H N T ++APE + ++
Sbjct: 189 PENLLYTSKRPNAILKLTDFGFA---KETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSC 244
Query: 243 DVYSFGALLLELLTGKRISYSS 264
D++S G ++ LL G YS+
Sbjct: 245 DMWSLGVIMYILLCGYPPFYSN 266
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
E+ A+ YL ++ I+ RD+KP IL E DF ++ +P +T + +
Sbjct: 123 ELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR-ETQI---TTMA 175
Query: 223 GTFGFIAPEYMST---ANCNEKSDVYSFGALLLELLTGKR 259
GT ++APE S+ A + D +S G ELL G+R
Sbjct: 176 GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 13/142 (9%)
Query: 126 ILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIK 185
++V E + G L RI D G Q F + ++ I A+ YLH S I RD+K
Sbjct: 95 LIVMECLDGGELFSRIQD-RGDQA--FTEREASEIMKSIGEAIQYLH---SINIAHRDVK 148
Query: 186 PSTILFQEQN---VAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKS 242
P +L+ + + K DF + E +H N T ++APE + ++
Sbjct: 149 PENLLYTSKRPNAILKLTDFGFA---KETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSC 204
Query: 243 DVYSFGALLLELLTGKRISYSS 264
D++S G ++ LL G YS+
Sbjct: 205 DMWSLGVIMYILLCGYPPFYSN 226
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 13/142 (9%)
Query: 126 ILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIK 185
++V E + G L RI D G Q F + ++ I A+ YLH S I RD+K
Sbjct: 89 LIVMECLDGGELFSRIQD-RGDQA--FTEREASEIMKSIGEAIQYLH---SINIAHRDVK 142
Query: 186 PSTILFQEQN---VAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKS 242
P +L+ + + K DF + E +H N T ++APE + ++
Sbjct: 143 PENLLYTSKRPNAILKLTDFGFA---KETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSC 198
Query: 243 DVYSFGALLLELLTGKRISYSS 264
D++S G ++ LL G YS+
Sbjct: 199 DMWSLGVIMYILLCGYPPFYSN 220
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
++ + Y+H S I+ RD+KPS + E + + DF ++ E T +
Sbjct: 139 QLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT------GYV 189
Query: 223 GTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
T + APE M + + N+ D++S G ++ ELL GK +
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 228
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
++ + Y+H S I+ RD+KPS + E + + DF ++ E T +
Sbjct: 139 QLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT------GYV 189
Query: 223 GTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGK 258
T + APE M + + N+ D++S G ++ ELL GK
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 13/142 (9%)
Query: 126 ILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIK 185
++V E + G L RI D G Q F + ++ I A+ YLH S I RD+K
Sbjct: 105 LIVMECLDGGELFSRIQD-RGDQA--FTEREASEIMKSIGEAIQYLH---SINIAHRDVK 158
Query: 186 PSTILFQEQN---VAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKS 242
P +L+ + + K DF + E +H N T ++APE + ++
Sbjct: 159 PENLLYTSKRPNAILKLTDFGFA---KETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSC 214
Query: 243 DVYSFGALLLELLTGKRISYSS 264
D++S G ++ LL G YS+
Sbjct: 215 DMWSLGVIMYILLCGYPPFYSN 236
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 13/142 (9%)
Query: 126 ILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIK 185
++V E + G L RI D G Q F + ++ I A+ YLH S I RD+K
Sbjct: 91 LIVMECLDGGELFSRIQD-RGDQA--FTEREASEIMKSIGEAIQYLH---SINIAHRDVK 144
Query: 186 PSTILFQEQN---VAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKS 242
P +L+ + + K DF + E +H N T ++APE + ++
Sbjct: 145 PENLLYTSKRPNAILKLTDFGFA---KETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSC 200
Query: 243 DVYSFGALLLELLTGKRISYSS 264
D++S G ++ LL G YS+
Sbjct: 201 DMWSLGVIMYILLCGYPPFYSN 222
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 13/142 (9%)
Query: 126 ILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIK 185
++V E + G L RI D G Q F + ++ I A+ YLH S I RD+K
Sbjct: 90 LIVMECLDGGELFSRIQD-RGDQA--FTEREASEIMKSIGEAIQYLH---SINIAHRDVK 143
Query: 186 PSTILFQEQN---VAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKS 242
P +L+ + + K DF + E +H N T ++APE + ++
Sbjct: 144 PENLLYTSKRPNAILKLTDFGFA---KETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSC 199
Query: 243 DVYSFGALLLELLTGKRISYSS 264
D++S G ++ LL G YS+
Sbjct: 200 DMWSLGVIMYILLCGYPPFYSN 221
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVF-EFVACGTLAD--RIHDPNGSQLEPFLMKHRL 158
+ Q H NI++ G + +P+++ EF+ G L R++D + ++ M +
Sbjct: 69 SIMGQFEHPNIIRLEGVVTNS-MPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGI 127
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
M ++Y+H RD+ IL V K DF +S + E + +
Sbjct: 128 ASGMRYLAEMSYVH---------RDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTET 178
Query: 219 NKVIGTFG--FIAPEYMSTANCNEKSDVYSFGALLLELLT-GKR 259
+ + G + APE ++ SD +S+G ++ E+++ G+R
Sbjct: 179 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGER 222
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 26/178 (14%)
Query: 98 FNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDP------------- 144
FN + Q++H +++K G C + +L+ E+ G+L + +
Sbjct: 77 FNVL---KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 145 ------NGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAK 198
+ M + A +I+ + YL +V RD+ IL E K
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMSLVHRDLAARNILVAEGRKMK 190
Query: 199 FFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
DF +S + E + V + I ++A E + +SDV+SFG LL E++T
Sbjct: 191 ISDFGLSRDVYEEDSXVKRSQGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 16/160 (10%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I+ ++ H NI+K + +LVFE + ++ D LE K L
Sbjct: 51 ISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFL-- 106
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVNDN 218
+++ N +AY H R ++ RD+KP +L + K DF + + IP V
Sbjct: 107 -LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP-----VRKY 157
Query: 219 NKVIGTFGFIAPE-YMSTANCNEKSDVYSFGALLLELLTG 257
I T + AP+ M + + D++S G + E++ G
Sbjct: 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 77/168 (45%), Gaps = 13/168 (7%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I+ ++H++++ F G + + +V E +L + +H + EP ++ L+
Sbjct: 68 ISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEP-EARYYLR- 124
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
+I YLH ++ RD+K + E K DF ++ + + + K
Sbjct: 125 --QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV----EYDGERKK 175
Query: 221 VI-GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFE 267
+ GT +IAPE +S + + DV+S G ++ LL GK +SC +
Sbjct: 176 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK 223
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 77/168 (45%), Gaps = 13/168 (7%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I+ ++H++++ F G + + +V E +L + +H + EP ++ L+
Sbjct: 68 ISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEP-EARYYLR- 124
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
+I YLH ++ RD+K + E K DF ++ + + + K
Sbjct: 125 --QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV----EYDGERKK 175
Query: 221 VI-GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFE 267
+ GT +IAPE +S + + DV+S G ++ LL GK +SC +
Sbjct: 176 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK 223
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 99/245 (40%), Gaps = 41/245 (16%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLK 159
+ Q H NI+ G + + +++ E++ G+L R +D + ++ M +
Sbjct: 61 SIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIG 120
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI---PEGKTHVN 216
M+ + ++Y+H RD+ IL V K DF +S + PE +
Sbjct: 121 SGMKYLSDMSYVH---------RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA-AYTT 170
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQE 276
K+ + APE ++ SDV+S+G ++ E++ SY GE +
Sbjct: 171 RGGKI--PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM-----SY------GERPYWD- 216
Query: 277 LVRKSIESNSFKEIVDPIIVGEEGL-WPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAK 335
S ++++ I EEG P ++ +L + C K DRP Q+
Sbjct: 217 --------MSNQDVIKAI---EEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVN 265
Query: 336 QLRQL 340
L +L
Sbjct: 266 MLDKL 270
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 26/178 (14%)
Query: 98 FNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDP------------- 144
FN + Q++H +++K G C + +L+ E+ G+L + +
Sbjct: 77 FNVL---KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 145 ------NGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAK 198
+ M + A +I+ + YL +V RD+ IL E K
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMK 190
Query: 199 FFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
DF +S + E + V + I ++A E + +SDV+SFG LL E++T
Sbjct: 191 ISDFGLSRDVYEEDSXVKRSQGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E+ G + + ++ F H A +I YLH S +++RD+KP
Sbjct: 118 MVMEYAPGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYS 246
++ +Q + DF + + +G+T + GT ++APE + + N+ D ++
Sbjct: 170 ENLMIDQQGYIQVTDFGFAKRV-KGRTWX-----LCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 247 FGALLLELLTG 257
G L+ E+ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 25/145 (17%)
Query: 149 LEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS--- 205
LEP H+ V ++ + YLH G ++ RD+KPS IL + K DF +S
Sbjct: 106 LEPV---HKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSF 159
Query: 206 -----------ISIPEGKTHVNDNNKV----IGTFGFIAPE-YMSTANCNEKSDVYSFGA 249
+SI E + +D+ + + T + APE + + + D++S G
Sbjct: 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGC 219
Query: 250 LLLELLTGKRISYSSCFENGEEYFL 274
+L E+L GK I S N E +
Sbjct: 220 ILGEILCGKPIFPGSSTMNQLERII 244
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 77/168 (45%), Gaps = 13/168 (7%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I+ ++H++++ F G + + +V E +L + +H + EP ++ L+
Sbjct: 72 ISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEP-EARYYLR- 128
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
+I YLH ++ RD+K + E K DF ++ + + + K
Sbjct: 129 --QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV----EYDGERKK 179
Query: 221 VI-GTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFE 267
+ GT +IAPE +S + + DV+S G ++ LL GK +SC +
Sbjct: 180 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK 227
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 99/245 (40%), Gaps = 41/245 (16%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLK 159
+ Q H NI+ G + + +++ E++ G+L R +D + ++ M +
Sbjct: 67 SIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIG 126
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI---PEGKTHVN 216
M+ + ++Y+H RD+ IL V K DF +S + PE +
Sbjct: 127 SGMKYLSDMSYVH---------RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA-AYTT 176
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQE 276
K+ + APE ++ SDV+S+G ++ E++ SY GE +
Sbjct: 177 RGGKI--PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM-----SY------GERPYWD- 222
Query: 277 LVRKSIESNSFKEIVDPIIVGEEGL-WPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAK 335
S ++++ I EEG P ++ +L + C K DRP Q+
Sbjct: 223 --------MSNQDVIKAI---EEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVN 271
Query: 336 QLRQL 340
L +L
Sbjct: 272 MLDKL 276
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 16/153 (10%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMK--HRLKVAM 162
Q H +I+K +G TE P+ ++ E G L + Q+ F + + A
Sbjct: 447 QFDHPHIVKLIGVI--TENPVWIIMELCTLGELRSFL------QVRKFSLDLASLILYAY 498
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+++ A+AYL S+ V RDI +L + K DF +S + + + K+
Sbjct: 499 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL- 554
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELL 255
++APE ++ SDV+ FG + E+L
Sbjct: 555 -PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q H +I+K +G TE P+ ++ E G L + S + + A ++
Sbjct: 69 QFDHPHIVKLIGVI--TENPVWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQL 122
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
+ A+AYL S+ V RDI +L + K DF +S + + + K+
Sbjct: 123 STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--P 177
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELL 255
++APE ++ SDV+ FG + E+L
Sbjct: 178 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q H +I+K +G TE P+ ++ E G L + S + + A ++
Sbjct: 70 QFDHPHIVKLIGVI--TENPVWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQL 123
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
+ A+AYL S+ V RDI +L + K DF +S + + + K+
Sbjct: 124 STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--P 178
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELL 255
++APE ++ SDV+ FG + E+L
Sbjct: 179 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 96/245 (39%), Gaps = 36/245 (14%)
Query: 108 SHKNILKFVGCCLETEL-----PILVFEFVACGTLADRI---HDPNGSQLEPFLMKHRLK 159
SH N+++ +G C+E P+++ F+ G L + G + P ++ LK
Sbjct: 94 SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIP--LQTLLK 151
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNN 219
++IA + YL +R + RD+ + ++ DF +S I G +
Sbjct: 152 FMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRI 208
Query: 220 KVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVR 279
+ +IA E ++ KSDV++FG + E+ T Y +N E Y
Sbjct: 209 AKM-PVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGV-QNHEMY------- 259
Query: 280 KSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQ 339
D ++ G P E L E+ C DRPT + QL +
Sbjct: 260 ------------DYLLHGHRLKQP--EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEK 305
Query: 340 LHKSI 344
L +S+
Sbjct: 306 LLESL 310
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 16/160 (10%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I+ ++ H NI+K + +LVFE + ++ D LE K L
Sbjct: 51 ISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFL-- 106
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVNDN 218
+++ N +AY H R ++ RD+KP +L + K DF + + IP V
Sbjct: 107 -LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP-----VRKY 157
Query: 219 NKVIGTFGFIAPE-YMSTANCNEKSDVYSFGALLLELLTG 257
+ T + AP+ M + + D++S G + E++ G
Sbjct: 158 THEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q H +I+K +G TE P+ ++ E G L + S + + A ++
Sbjct: 67 QFDHPHIVKLIGVI--TENPVWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQL 120
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
+ A+AYL S+ V RDI +L + K DF +S + + + K+
Sbjct: 121 STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--P 175
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELL 255
++APE ++ SDV+ FG + E+L
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q H +I+K +G TE P+ ++ E G L + S + + A ++
Sbjct: 64 QFDHPHIVKLIGVI--TENPVWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQL 117
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
+ A+AYL S+ V RDI +L + K DF +S + + + K+
Sbjct: 118 STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--P 172
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELL 255
++APE ++ SDV+ FG + E+L
Sbjct: 173 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 14/102 (13%)
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
K+A+ I A+ +LH S ++ RD+KPS +L K DF +S + V+D
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL------VDDV 164
Query: 219 NKVI--GTFGFIAPEY----MSTANCNEKSDVYSFGALLLEL 254
K I G ++APE ++ + KSD++S G ++EL
Sbjct: 165 AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 16/160 (10%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I+ ++ H NI+K + +LVFE + ++ D LE K L
Sbjct: 51 ISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFL-- 106
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVNDN 218
+++ N +AY H R ++ RD+KP +L + K DF + + IP V
Sbjct: 107 -LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP-----VRKY 157
Query: 219 NKVIGTFGFIAPE-YMSTANCNEKSDVYSFGALLLELLTG 257
+ T + AP+ M + + D++S G + E++ G
Sbjct: 158 THEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q H +I+K +G TE P+ ++ E G L + S + + A ++
Sbjct: 72 QFDHPHIVKLIGVI--TENPVWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQL 125
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
+ A+AYL S+ V RDI +L + K DF +S + + + K+
Sbjct: 126 STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--P 180
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELL 255
++APE ++ SDV+ FG + E+L
Sbjct: 181 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 12/141 (8%)
Query: 118 CCLET-ELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFS 176
CC +T + V EFV G L I + F A EI +A+ +LH
Sbjct: 91 CCFQTPDRLFFVMEFVNGGDLMFHIQ-----KSRRFDEARARFYAAEIISALMFLH---D 142
Query: 177 RPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTA 236
+ I++RD+K +L + K DF + EG + GT +IAPE +
Sbjct: 143 KGIIYRDLKLDNVLLDHEGHCKLADFGMC---KEGICNGVTTATFCGTPDYIAPEILQEM 199
Query: 237 NCNEKSDVYSFGALLLELLTG 257
D ++ G LL E+L G
Sbjct: 200 LYGPAVDWWAMGVLLYEMLCG 220
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q H +I+K +G TE P+ ++ E G L + S + + A ++
Sbjct: 67 QFDHPHIVKLIGVI--TENPVWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQL 120
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
+ A+AYL S+ V RDI +L + K DF +S + + + K+
Sbjct: 121 STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--P 175
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELL 255
++APE ++ SDV+ FG + E+L
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 164
Q H +I+K +G TE P+ ++ E G L + S + + A ++
Sbjct: 95 QFDHPHIVKLIGVI--TENPVWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQL 148
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
+ A+AYL S+ V RDI +L + K DF +S + + + K+
Sbjct: 149 STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--P 203
Query: 225 FGFIAPEYMSTANCNEKSDVYSFGALLLELL 255
++APE ++ SDV+ FG + E+L
Sbjct: 204 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 16/153 (10%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMK--HRLKVAM 162
Q H +I+K +G TE P+ ++ E G L + Q+ F + + A
Sbjct: 447 QFDHPHIVKLIGVI--TENPVWIIMELCTLGELRSFL------QVRKFSLDLASLILYAY 498
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+++ A+AYL S+ V RDI +L + K DF +S + + + K+
Sbjct: 499 QLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL- 554
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELL 255
++APE ++ SDV+ FG + E+L
Sbjct: 555 -PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 16/153 (10%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMK--HRLKVAM 162
Q H +I+K +G TE P+ ++ E G L + Q+ F + + A
Sbjct: 67 QFDHPHIVKLIGVI--TENPVWIIMELCTLGELRSFL------QVRKFSLDLASLILYAY 118
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+++ A+AYL S+ V RDI +L + K DF +S + + + K+
Sbjct: 119 QLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL- 174
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELL 255
++APE ++ SDV+ FG + E+L
Sbjct: 175 -PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K F ++ H +D
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLA-------RHTDDEMTGY 182
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 79/187 (42%), Gaps = 29/187 (15%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAV 168
H NI+ + + +V E G L D+I + + F + V I V
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKI-----LRQKFFSEREASAVLFTITKTV 129
Query: 169 AYLHVGFSRPIVFRDIKPSTILFQEQN----VAKFFDFCVSISIPEGKTHVNDNNKVIGT 224
YLH ++ +V RD+KPS IL+ +++ + DF + + N ++ T
Sbjct: 130 EYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFA-------KQLRAENGLLXT 179
Query: 225 ----FGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRK 280
F+APE + + D++S G LL LTG + F NG + +E++ +
Sbjct: 180 PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG-----YTPFANGPDDTPEEILAR 234
Query: 281 SIESNSF 287
I S F
Sbjct: 235 -IGSGKF 240
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S ++ RD+KPS +L K DF ++ H + +
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 223 GTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
T + APE M + KS D++S G +L E+L+ + I
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 94/243 (38%), Gaps = 37/243 (15%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLM-----------KHR 157
H NI+ +G C L E+ G L D + + +P +
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
L A ++A + YL + + R++ IL E VAK DF +S
Sbjct: 142 LHFAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLS---------RGQ 189
Query: 218 NNKVIGTFGFIAPEYMSTANCN-----EKSDVYSFGALLLELLTGKRISY--SSCFENGE 270
V T G + +M+ + N SDV+S+G LL E+++ Y +C E E
Sbjct: 190 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE 249
Query: 271 EYFLQELVRKSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTM 330
+ L + R N E+ D + W EK + S+ ++ + L++ ++R T
Sbjct: 250 K--LPQGYRLEKPLNCDDEVYDLM----RQCWREKPYERPSFAQILVS-LNRMLEERKTY 302
Query: 331 VQV 333
V
Sbjct: 303 VNT 305
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K D ++ H +D
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLA-------RHTDDEMTGY 182
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S ++ RD+KPS +L + K DF ++ H + +
Sbjct: 134 QILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 223 GTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
T + APE M + KS D++S G +L E+L+ + I
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 229
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K D ++ H +D
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLA-------RHTDDEMTGY 182
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
K+A+ I A+ +LH S ++ RD+KPS +L K DF +S + + D
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTID- 213
Query: 219 NKVIGTFGFIAPEY----MSTANCNEKSDVYSFGALLLEL 254
G ++APE ++ + KSD++S G ++EL
Sbjct: 214 ---AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 16/153 (10%)
Query: 106 QMSHKNILKFVGCCLETELPI-LVFEFVACGTLADRIHDPNGSQLEPFLMK--HRLKVAM 162
Q H +I+K +G TE P+ ++ E G L + Q+ F + + A
Sbjct: 67 QFDHPHIVKLIGVI--TENPVWIIMELCTLGELRSFL------QVRKFSLDLASLILYAY 118
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+++ A+AYL S+ V RDI +L + K DF +S + + K+
Sbjct: 119 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL- 174
Query: 223 GTFGFIAPEYMSTANCNEKSDVYSFGALLLELL 255
++APE ++ SDV+ FG + E+L
Sbjct: 175 -PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 14/142 (9%)
Query: 126 ILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIK 185
+++ E + G L RI + G Q F + ++ +I A+ +LH S I RD+K
Sbjct: 102 LIIMECMEGGELFSRIQE-RGDQA--FTEREAAEIMRDIGTAIQFLH---SHNIAHRDVK 155
Query: 186 PSTILF---QEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKS 242
P +L+ ++ V K DF + +T N T ++APE + ++
Sbjct: 156 PENLLYTSKEKDAVLKLTDFGFA-----KETTQNALQTPCYTPYYVAPEVLGPEKYDKSC 210
Query: 243 DVYSFGALLLELLTGKRISYSS 264
D++S G ++ LL G YS+
Sbjct: 211 DMWSLGVIMYILLCGFPPFYSN 232
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 96/243 (39%), Gaps = 37/243 (15%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
+ Q H NI+ G + + +++ E++ G+L + +G F + + +
Sbjct: 82 SIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR----FTVIQLVGML 137
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI---PEGKTHVNDN 218
I + + YL V RD+ IL V K DF +S + PE +
Sbjct: 138 RGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA-AYTTRG 193
Query: 219 NKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELV 278
K+ + APE ++ SDV+S+G ++ E++ SY GE +
Sbjct: 194 GKI--PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM-----SY------GERPYW---- 236
Query: 279 RKSIESNSFKEIVDPIIVGEEGL-WPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQL 337
S ++++ I EEG P ++ +L + C K DRP Q+ L
Sbjct: 237 -----DMSNQDVIKAI---EEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 288
Query: 338 RQL 340
+L
Sbjct: 289 DKL 291
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN-NKV 221
+I + Y+H S I+ RD+KPS + E K D ++ H +D
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLA-------RHTDDEMTGY 182
Query: 222 IGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE M + + N+ D++S G ++ ELLTG+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 14/135 (10%)
Query: 126 ILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIK 185
+++ E + G L RI + G Q F + ++ +I A+ +LH S I RD+K
Sbjct: 83 LIIMECMEGGELFSRIQE-RGDQA--FTEREAAEIMRDIGTAIQFLH---SHNIAHRDVK 136
Query: 186 PSTILF---QEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKS 242
P +L+ ++ V K DF + +T N T ++APE + ++
Sbjct: 137 PENLLYTSKEKDAVLKLTDFGFA-----KETTQNALQTPCYTPYYVAPEVLGPEKYDKSC 191
Query: 243 DVYSFGALLLELLTG 257
D++S G ++ LL G
Sbjct: 192 DMWSLGVIMYILLCG 206
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 29/172 (16%)
Query: 121 ETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM-EIANAVAYLHVGFSRPI 179
ET+L L+ +++ G L + SQ E F +H +++ + EI A+ +LH I
Sbjct: 131 ETKLH-LILDYINGGELFTHL-----SQRERF-TEHEVQIYVGEIVLALEHLH---KLGI 180
Query: 180 VFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI----GTFGFIAPEYMST 235
++RDIK IL DF +S K V D + GT ++AP+ +
Sbjct: 181 IYRDIKLENILLDSNGHVVLTDFGLS------KEFVADETERAYDFCGTIEYMAPDIVRG 234
Query: 236 ANC--NEKSDVYSFGALLLELLTGKRISYSSCFE-NGEEYFLQELVRKSIES 284
+ ++ D +S G L+ ELLTG +S F +GE+ E+ R+ ++S
Sbjct: 235 GDSGHDKAVDWWSLGVLMYELLTG-----ASPFTVDGEKNSQAEISRRILKS 281
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S ++ RD+KPS +L K DF ++ H + +
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 223 GTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
T + APE M + KS D++S G +L E+L+ + I
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S ++ RD+KPS +L K DF ++ H + +
Sbjct: 152 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 223 GTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
T + APE M + KS D++S G +L E+L+ + I
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 247
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 13/150 (8%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAV 168
H +I+K +V E+V+ G L D I NG E K ++ +I + V
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICK-NGRLDE----KESRRLFQQILSGV 129
Query: 169 AYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFI 228
Y H +V RD+KP +L AK DF +S + +G+ G+ +
Sbjct: 130 DYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF----LRXSCGSPNYA 182
Query: 229 APEYMS-TANCNEKSDVYSFGALLLELLTG 257
APE +S + D++S G +L LL G
Sbjct: 183 APEVISGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S ++ RD+KPS +L K DF ++ H + +
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 223 GTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
T + APE M + KS D++S G +L E+L+ + I
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 16/164 (9%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVF-EFVACGTLAD--RIHDPNGSQLEPFLMKHRL 158
+ Q H NI++ G + +P+++ EF+ G L R++D + ++ M +
Sbjct: 67 SIMGQFEHPNIIRLEGVVTNS-MPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGI 125
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
M ++Y+H RD+ IL V K DF +S + E +
Sbjct: 126 ASGMRYLAEMSYVH---------RDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYT 176
Query: 219 NKVIGTFG--FIAPEYMSTANCNEKSDVYSFGALLLELLT-GKR 259
+ + G + APE ++ SD +S+G ++ E+++ G+R
Sbjct: 177 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGER 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
++ + Y+H S I+ RD+KPS + E + DF ++ E T +
Sbjct: 131 QLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMT------GYV 181
Query: 223 GTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGK 258
T + APE M + + N+ D++S G ++ ELL GK
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 80/192 (41%), Gaps = 21/192 (10%)
Query: 84 MKFGGNLNSEEYCCFNCIAFASQMSHKNI-LKFVGCCLETELPILVFEFVACGTLADRIH 142
++ G NL + EY S+ ++ +F + V+ F CG +
Sbjct: 25 LRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL 84
Query: 143 DPNGSQLE--------PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILF--- 191
+ G LE F +K L +A+++ + + Y+H S+ +++RD+KP L
Sbjct: 85 ELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRP 141
Query: 192 --QEQNVAKFFDFCVSISI--PEGKTHV--NDNNKVIGTFGFIAPEYMSTANCNEKSDVY 245
+ Q V DF ++ PE K H+ ++ + GT +++ + + D+
Sbjct: 142 GNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLE 201
Query: 246 SFGALLLELLTG 257
+ G + + L G
Sbjct: 202 ALGHMFMYFLRG 213
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S ++ RD+KPS +L K DF ++ H + +
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 223 GTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
T + APE M + KS D++S G +L E+L+ + I
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV-SISIPEGKTHVNDNNKV 221
EI +A+ YLH + +V+RD+K ++ + K DF + I +G T
Sbjct: 259 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM----KTF 312
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVR 279
GT ++APE + + D + G ++ E++ G+ Y+ E E L E +R
Sbjct: 313 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 370
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV-SISIPEGKTHVNDNNKV 221
EI +A+ YLH + +V+RD+K ++ + K DF + I +G T
Sbjct: 256 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM----KTF 309
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVR 279
GT ++APE + + D + G ++ E++ G+ Y+ E E L E +R
Sbjct: 310 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 367
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 80/192 (41%), Gaps = 21/192 (10%)
Query: 84 MKFGGNLNSEEYCCFNCIAFASQMSHKNI-LKFVGCCLETELPILVFEFVACGTLADRIH 142
++ G NL + EY S+ ++ +F + V+ F CG +
Sbjct: 46 LRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL 105
Query: 143 DPNGSQLE--------PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILF--- 191
+ G LE F +K L +A+++ + + Y+H S+ +++RD+KP L
Sbjct: 106 ELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRP 162
Query: 192 --QEQNVAKFFDFCVSISI--PEGKTHV--NDNNKVIGTFGFIAPEYMSTANCNEKSDVY 245
+ Q V DF ++ PE K H+ ++ + GT +++ + + D+
Sbjct: 163 GNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLE 222
Query: 246 SFGALLLELLTG 257
+ G + + L G
Sbjct: 223 ALGHMFMYFLRG 234
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S ++ RD+KPS +L K DF ++ H + +
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 223 GTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
T + APE M + KS D++S G +L E+L+ + I
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV-SISIPEGKTHVNDNNKV 221
EI +A+ YLH + +V+RD+K ++ + K DF + I +G T
Sbjct: 117 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT----MKXF 170
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVR 279
GT ++APE + + D + G ++ E++ G+ Y+ E E L E +R
Sbjct: 171 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 228
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV-SISIPEGKTHVNDNNKV 221
EI +A+ YLH + +V+RD+K ++ + K DF + I +G T
Sbjct: 116 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT----MKXF 169
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVR 279
GT ++APE + + D + G ++ E++ G+ Y+ E E L E +R
Sbjct: 170 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 227
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV-SISIPEGKTHVNDNNKV 221
EI +A+ YLH + +V+RD+K ++ + K DF + I +G T
Sbjct: 118 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT----MKXF 171
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVR 279
GT ++APE + + D + G ++ E++ G+ Y+ E E L E +R
Sbjct: 172 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 229
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 13/142 (9%)
Query: 126 ILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIK 185
++V E + G L RI D G Q F + ++ I A+ YLH S I RD+K
Sbjct: 135 LIVXECLDGGELFSRIQD-RGDQA--FTEREASEIXKSIGEAIQYLH---SINIAHRDVK 188
Query: 186 PSTILFQEQN---VAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKS 242
P +L+ + + K DF + E +H N T ++APE + ++
Sbjct: 189 PENLLYTSKRPNAILKLTDFGFA---KETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSC 244
Query: 243 DVYSFGALLLELLTGKRISYSS 264
D +S G + LL G YS+
Sbjct: 245 DXWSLGVIXYILLCGYPPFYSN 266
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS-ISIPEGKTHVNDNNKV 221
+I + Y+H S ++ RD+KPS +L K DF ++ I+ PE H +
Sbjct: 152 QILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPE-HDHTGFLTEX 207
Query: 222 IGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
+ T + APE M + KS D++S G +L E+L+ + I
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 247
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S ++ RD+KPS +L K DF ++ H + +
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 223 GTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
T + APE M + KS D++S G +L E+L+ + I
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 80/192 (41%), Gaps = 21/192 (10%)
Query: 84 MKFGGNLNSEEYCCFNCIAFASQMSHKNI-LKFVGCCLETELPILVFEFVACGTLADRIH 142
++ G NL + EY S+ ++ +F + V+ F CG +
Sbjct: 25 LRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL 84
Query: 143 DPNGSQLE--------PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILF--- 191
+ G LE F +K L +A+++ + + Y+H S+ +++RD+KP L
Sbjct: 85 ELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRP 141
Query: 192 --QEQNVAKFFDFCVSISI--PEGKTHV--NDNNKVIGTFGFIAPEYMSTANCNEKSDVY 245
+ Q V DF ++ PE K H+ ++ + GT +++ + + D+
Sbjct: 142 GNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLE 201
Query: 246 SFGALLLELLTG 257
+ G + + L G
Sbjct: 202 ALGHMFMYFLRG 213
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S ++ RD+KPS +L K DF ++ H + +
Sbjct: 130 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 223 GTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
T + APE M + KS D++S G +L E+L+ + I
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S ++ RD+KPS +L K DF ++ H + +
Sbjct: 137 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 193
Query: 223 GTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
T + APE M + KS D++S G +L E+L+ + I
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 232
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S ++ RD+KPS +L K DF ++ H + +
Sbjct: 138 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 194
Query: 223 GTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
T + APE M + KS D++S G +L E+L+ + I
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 233
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S ++ RD+KPS +L K DF ++ H + +
Sbjct: 129 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 185
Query: 223 GTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
T + APE M + KS D++S G +L E+L+ + I
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 224
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLK 159
+ Q H NI++ G +++ ++V E + G+L R HD F + +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ------FTVIQLVG 151
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI---PEGKTHVN 216
+ IA+ + YL V RD+ IL V K DF +S + PE +
Sbjct: 152 MLRGIASGMKYLS---DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTT 207
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT-GKR 259
K+ + +PE ++ SDV+S+G +L E+++ G+R
Sbjct: 208 RGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S ++ RD+KPS +L K DF ++ H + +
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 223 GTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
T + APE M + KS D++S G +L E+L+ + I
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 8/107 (7%)
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPE-GKTHVNDNNKVIG 223
A V L S ++ RD+KP +L + K DF + + E G H + +G
Sbjct: 181 AEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHC---DTAVG 237
Query: 224 TFGFIAPEYMSTANCN----EKSDVYSFGALLLELLTGKRISYSSCF 266
T +I+PE + + + + D +S G L E+L G Y+
Sbjct: 238 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL 284
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S ++ RD+KPS +L K DF ++ H + +
Sbjct: 140 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 196
Query: 223 GTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
T + APE M + KS D++S G +L E+L+ + I
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 235
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S ++ RD+KPS +L K DF ++ H + +
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 223 GTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
T + APE M + KS D++S G +L E+L+ + I
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S ++ RD+KPS +L K DF ++ H + +
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 223 GTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
T + APE M + KS D++S G +L E+L+ + I
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQ-------YLLNWC 124
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF ++ + E K + + K
Sbjct: 125 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 182 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 237
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S ++ RD+KPS +L K DF ++ H + +
Sbjct: 134 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 223 GTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
T + APE M + KS D++S G +L E+L+ + I
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S ++ RD+KPS +L K DF ++ H + +
Sbjct: 152 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 223 GTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
T + APE M + KS D++S G +L E+L+ + I
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 247
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S ++ RD+KPS +L K DF ++ H + +
Sbjct: 130 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 223 GTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
T + APE M + KS D++S G +L E+L+ + I
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S ++ RD+KPS +L K DF ++ H + +
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 223 GTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
T + APE M + KS D++S G +L E+L+ + I
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S ++ RD+KPS +L K DF ++ H + +
Sbjct: 134 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 223 GTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
T + APE M + KS D++S G +L E+L+ + I
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 229
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 69/158 (43%), Gaps = 22/158 (13%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
Q+ + I++ +G C + E +LV E G L FL+ R ++ ++
Sbjct: 392 QLDNPYIVRLIGVC-QAEALMLVMEMAG------------GGPLHKFLVGKREEIP--VS 436
Query: 166 NAVAYLH---VGF----SRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
N LH +G + V R++ +L ++ AK DF +S ++ ++
Sbjct: 437 NVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 496
Query: 219 NKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ + APE ++ + +SDV+S+G + E L+
Sbjct: 497 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 14/156 (8%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRI--HDPNGSQLEPFLMKHRLKVAMEI 164
+ H +I++ + + +VFEF+ L I G + H ++ +I
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR---QI 139
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILF-QEQNVA--KFFDFCVSISIPEGKTHVNDNNKV 221
A+ Y H I+ RD+KP +L ++N A K DF V+I + G++ + +V
Sbjct: 140 LEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL--GESGLVAGGRV 194
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
GT F+APE + + DV+ G +L LL+G
Sbjct: 195 -GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 73/164 (44%), Gaps = 18/164 (10%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNG--SQLEPFLMKHRLK 159
+ Q H NI+ G +++ ++V E++ G+L + +G + ++ M +
Sbjct: 75 SIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGIS 134
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI---PEGKTHVN 216
M+ + + Y+H RD+ IL V K DF +S + PE +
Sbjct: 135 AGMKYLSDMGYVH---------RDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTT 184
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT-GKR 259
K+ + APE ++ SDV+S+G ++ E+++ G+R
Sbjct: 185 RGGKI--PIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGER 226
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S ++ RD+KPS +L K DF ++ H + +
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 192
Query: 223 GTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
T + APE M + KS D++S G +L E+L+ + I
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI 222
+I + Y+H S ++ RD+KPS +L K DF ++ H + +
Sbjct: 137 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 193
Query: 223 GTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
T + APE M + KS D++S G +L E+L+ + I
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 232
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I ++SH NI+ + LVF+F+ T + I N L P +K + +
Sbjct: 63 IKLLQELSHPNIIGLLDAFGHKSNISLVFDFME--TDLEVIIKDNSLVLTPSHIKAYMLM 120
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
++ + YLH + I+ RD+KP+ +L E V K DF ++ S G + ++
Sbjct: 121 TLQ---GLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSF--GSPNRAYXHQ 172
Query: 221 VIGTFGFIAPEYMSTANC-NEKSDVYSFGALLLELL 255
V+ T + APE + A D+++ G +L ELL
Sbjct: 173 VV-TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 123
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF ++ + E K + + K
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 181 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 26/147 (17%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+VFE + T D I + NG PF + H K+A +I +V +LH S + D+KP
Sbjct: 94 IVFELLGLSTY-DFIKE-NG--FLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKP 146
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVI----------------GTFGFIAP 230
ILF + + + ++ + + +T +N + KV+ T + AP
Sbjct: 147 ENILFVQSDYTEAYNPKIK---RDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAP 203
Query: 231 EYMSTANCNEKSDVYSFGALLLELLTG 257
E + ++ DV+S G +L+E G
Sbjct: 204 EVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 17/170 (10%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEP---FLMKHR 157
IA + + +++ F G + + +V E +L + +H + EP + M+
Sbjct: 77 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQT 135
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
++ V YLH + ++ RD+K + + K DF ++ I D
Sbjct: 136 IQ-------GVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD 185
Query: 218 NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFE 267
+ GT +IAPE + + + D++S G +L LL GK +SC +
Sbjct: 186 ---LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLK 232
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 124
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF ++ + E K + + K
Sbjct: 125 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 182 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 237
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 126
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF ++ + E K + + K
Sbjct: 127 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 184 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 239
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 130
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF ++ + E K + + K
Sbjct: 131 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 188 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 243
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 93 EEYCCFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF 152
++Y N I+ +Q+ H ++ + +L+ EF++ G L DRI + E
Sbjct: 91 DKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAE 150
Query: 153 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVA--KFFDFCVSISI-P 209
++ + ++ A E + ++H IV DIKP I+ + + + K DF ++ + P
Sbjct: 151 VINY-MRQACE---GLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203
Query: 210 EGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ V T F APE + +D+++ G L LL+G
Sbjct: 204 DEIVKV-----TTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 125
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF ++ + E K + + K
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 183 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 238
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 76 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 127
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF ++ + E K + + K
Sbjct: 128 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 184
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 185 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 240
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 13/150 (8%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAV 168
H +I+K +V E+V+ G L D I +G E M+ R ++ +I +AV
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICK-HGRVEE---MEAR-RLFQQILSAV 124
Query: 169 AYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFI 228
Y H +V RD+KP +L AK DF +S + +G+ + D+ G+ +
Sbjct: 125 DYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF-LRDS---CGSPNYA 177
Query: 229 APEYMSTA-NCNEKSDVYSFGALLLELLTG 257
APE +S + D++S G +L LL G
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 36/192 (18%)
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDN 218
K+A+ I A+ +LH S ++ RD+KPS +L K DF +S + V+D
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYL------VDDV 191
Query: 219 NKVI--GTFGFIAPEY----MSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEY 272
K I G + APE ++ + KSD++S G +EL R Y S
Sbjct: 192 AKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAI-LRFPYDSW------- 243
Query: 273 FLQELVRKSIESNSFKEIVDPIIVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQ 332
F+++ +V E +K + + +CL K+ ++RPT +
Sbjct: 244 -----------GTPFQQLKQ--VVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPE 290
Query: 333 VAKQ-LRQLHKS 343
+ + LH+S
Sbjct: 291 LXQHPFFTLHES 302
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQ-------YLLNWC 123
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF ++ + E K + + K
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 181 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 123
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF ++ + E K + + K
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 181 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 28/148 (18%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+VFE + T D I + NG PF + H K+A +I +V +LH S + D+KP
Sbjct: 94 IVFELLGLSTY-DFIKE-NG--FLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKP 146
Query: 187 STILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFG-----------------FIA 229
ILF + + + ++ + + +T +N + KV+ FG + A
Sbjct: 147 ENILFVQSDYTEAYNPKIK---RDERTLINPDIKVVD-FGSATYDDEHHSTLVXXRHYRA 202
Query: 230 PEYMSTANCNEKSDVYSFGALLLELLTG 257
PE + ++ DV+S G +L+E G
Sbjct: 203 PEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 15/152 (9%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAV 168
H+NIL E +++FEF++ + +RI N S E + + ++ A+
Sbjct: 60 HRNILHLHESFESMEELVMIFEFISGLDIFERI---NTSAFE-LNEREIVSYVHQVCEAL 115
Query: 169 AYLHVGFSRPIVFRDIKPSTILFQEQ--NVAKFFDFCVSISIPEGKTHVNDNNKVIGTF- 225
+LH S I DI+P I++Q + + K +F + + G DN +++ T
Sbjct: 116 QFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG-----DNFRLLFTAP 167
Query: 226 GFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ APE + +D++S G L+ LL+G
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG 199
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 17/170 (10%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEP---FLMKHR 157
IA + + +++ F G + + +V E +L + +H + EP + M+
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQT 151
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND 217
++ V YLH + ++ RD+K + + K DF ++ I D
Sbjct: 152 IQ-------GVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD 201
Query: 218 NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFE 267
+ GT +IAPE + + + D++S G +L LL GK +SC +
Sbjct: 202 ---LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLK 248
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 106 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 157
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF ++ + E K + + K
Sbjct: 158 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 214
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 215 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 270
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 14/154 (9%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 166
+ H NI++ E LVF+ V G L + I E + +I
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI-----VAREYYSEADASHCIHQILE 141
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQ---NVAKFFDFCVSISIPEGKTHVNDNNKVIG 223
+V ++H IV RD+KP +L + K DF ++I + +G+ G
Sbjct: 142 SVNHIH---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGEQQAWFG--FAG 195
Query: 224 TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
T G+++PE + + D+++ G +L LL G
Sbjct: 196 TPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 82 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 133
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF ++ + E K + + K
Sbjct: 134 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 190
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 191 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 246
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 130
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF ++ + E K + + K
Sbjct: 131 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 188 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 243
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 66 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 117
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF ++ + E K + + K
Sbjct: 118 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 174
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 175 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 230
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 78 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 129
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF ++ + E K + + K
Sbjct: 130 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 186
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 187 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 242
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 130
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF ++ + E K + + K
Sbjct: 131 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 188 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 243
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 97 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 148
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF ++ + E K + + K
Sbjct: 149 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 205
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 206 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 261
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 69 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 120
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF ++ + E K + + K
Sbjct: 121 VQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 177
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 178 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 233
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 126
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF ++ + E K + + K
Sbjct: 127 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 184 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 239
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 123
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF ++ + E K + + K
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 181 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 126
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF ++ + E K + + K
Sbjct: 127 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 184 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 239
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 68/162 (41%), Gaps = 17/162 (10%)
Query: 108 SHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGS----QLEPFLMKHRL----- 158
+H NI+ +G C +++ E+ G L + + S + P +M+
Sbjct: 103 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 162
Query: 159 ----KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTH 214
+ ++A +A+L S+ + RD+ IL + K DF ++ I +
Sbjct: 163 EDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 219
Query: 215 VNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
V N + ++APE + +SDV+S+G L EL +
Sbjct: 220 VVKGNARL-PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 125
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF ++ + E K + + K
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 183 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 238
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 68/162 (41%), Gaps = 17/162 (10%)
Query: 108 SHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGS----QLEPFLMKHRL----- 158
+H NI+ +G C +++ E+ G L + + S + P +M+
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 159 ----KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTH 214
+ ++A +A+L S+ + RD+ IL + K DF ++ I +
Sbjct: 168 EDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 224
Query: 215 VNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
V N + ++APE + +SDV+S+G L EL +
Sbjct: 225 VVKGNARL-PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 123
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF ++ + E K + + K
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 181 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 126
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF ++ + E K + + K
Sbjct: 127 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 184 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 239
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 68/162 (41%), Gaps = 17/162 (10%)
Query: 108 SHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGS----QLEPFLMKHRL----- 158
+H NI+ +G C +++ E+ G L + + S + P +M+
Sbjct: 101 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 159 ----KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTH 214
+ ++A +A+L S+ + RD+ IL + K DF ++ I +
Sbjct: 161 EDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 217
Query: 215 VNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
V N + ++APE + +SDV+S+G L EL +
Sbjct: 218 VVKGNARL-PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 125
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFC-VSISIPEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF + E K + + K
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 183 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 238
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 68/162 (41%), Gaps = 17/162 (10%)
Query: 108 SHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGS----QLEPFLMKHRL----- 158
+H NI+ +G C +++ E+ G L + + S + P +M+
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 159 ----KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTH 214
+ ++A +A+L S+ + RD+ IL + K DF ++ I +
Sbjct: 145 EDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201
Query: 215 VNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
V N + ++APE + +SDV+S+G L EL +
Sbjct: 202 VVKGNARL-PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 76 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 127
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFC-VSISIPEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF + E K + + K
Sbjct: 128 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 184
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 185 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 240
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 125
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFC-VSISIPEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF + E K + + K
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 183 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 238
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 16/162 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I ++ HKNI++ + LVFEF C + D L+P ++K L
Sbjct: 52 ICLLKELKHKNIVRLHDVLHSDKKLTLVFEF--CDQDLKKYFDSCNGDLDPEIVKSFL-- 107
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVNDN 218
++ + + H SR ++ RD+KP +L K DF + + IP V
Sbjct: 108 -FQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP-----VRCY 158
Query: 219 NKVIGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKR 259
+ + T + P+ + A S D++S G + EL R
Sbjct: 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAAR 200
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 69/161 (42%), Gaps = 10/161 (6%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
+ Q H N++ G ++ +++ EF+ G+L + +G F + + +
Sbjct: 86 SIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ----FTVIQLVGML 141
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
IA + YL V RD+ IL V K DF +S + + + + +
Sbjct: 142 RGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSAL 198
Query: 222 IGTFG--FIAPEYMSTANCNEKSDVYSFGALLLELLT-GKR 259
G + APE + SDV+S+G ++ E+++ G+R
Sbjct: 199 GGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER 239
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 36/170 (21%)
Query: 108 SHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNG-SQLEPFLMKHRLKVAMEIAN 166
H+N+L+ + E + LVFE + G++ IH ++LE + V ++A+
Sbjct: 69 GHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV------VVQDVAS 122
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQN---VAKFFDF-----------CVSISIPEGK 212
A+ +LH ++ I RD+KP IL + N K DF C IS PE
Sbjct: 123 ALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELL 179
Query: 213 THVNDNNKVIGTFGFIAPEYMSTAN-----CNEKSDVYSFGALLLELLTG 257
T G+ ++APE + + +++ D++S G +L LL+G
Sbjct: 180 T-------PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 68/162 (41%), Gaps = 17/162 (10%)
Query: 108 SHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGS----QLEPFLMKHRL----- 158
+H NI+ +G C +++ E+ G L + + S + P +M+
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 159 ----KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTH 214
+ ++A +A+L S+ + RD+ IL + K DF ++ I +
Sbjct: 168 EDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNY 224
Query: 215 VNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
V N + ++APE + +SDV+S+G L EL +
Sbjct: 225 VVKGNARL-PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 24/180 (13%)
Query: 106 QMSHKNILKFVGCCLETE------LPILVFEFVACGTL-----ADRIHDPNGSQLEPF-- 152
+ H ++ K VG L + +P+++ F+ G L A RI + PF
Sbjct: 81 EFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGE------NPFNL 134
Query: 153 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGK 212
++ ++ ++IA + YL SR + RD+ + E DF +S I G
Sbjct: 135 PLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 213 THVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEY 272
+ + ++A E ++ SDV++FG + E++T + Y+ EN E Y
Sbjct: 192 YYRQGCASKL-PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAG-IENAEIY 249
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 63/154 (40%), Gaps = 14/154 (9%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 166
+ H NI++ E LVF+ V G L + I E + +I
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDI-----VAREYYSEADASHCIQQILE 114
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQ---NVAKFFDFCVSISIPEGKTHVNDNNKVIG 223
AV + H +V RD+KP +L + K DF ++I + +G G
Sbjct: 115 AVLHCH---QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGDQQAWFG--FAG 168
Query: 224 TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
T G+++PE + + D+++ G +L LL G
Sbjct: 169 TPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 36/170 (21%)
Query: 108 SHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNG-SQLEPFLMKHRLKVAMEIAN 166
H+N+L+ + E + LVFE + G++ IH ++LE + V ++A+
Sbjct: 69 GHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV------VVQDVAS 122
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQN---VAKFFDF-----------CVSISIPEGK 212
A+ +LH ++ I RD+KP IL + N K DF C IS PE
Sbjct: 123 ALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELL 179
Query: 213 THVNDNNKVIGTFGFIAPEYMSTAN-----CNEKSDVYSFGALLLELLTG 257
T G+ ++APE + + +++ D++S G +L LL+G
Sbjct: 180 T-------PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 19/171 (11%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEP---FLMKHR 157
IA + + +++ F G + + +V E +L + +H + EP + M+
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQT 151
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIP-EGKTHVN 216
++ V YLH + ++ RD+K + + K DF ++ I +G+
Sbjct: 152 IQ-------GVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--- 198
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFE 267
+ GT +IAPE + + + D++S G +L LL GK +SC +
Sbjct: 199 -KKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLK 248
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 19/171 (11%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEP---FLMKHR 157
IA + + +++ F G + + +V E +L + +H + EP + M+
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQT 151
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIP-EGKTHVN 216
++ V YLH + ++ RD+K + + K DF ++ I +G+
Sbjct: 152 IQ-------GVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--- 198
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFE 267
+ GT +IAPE + + + D++S G +L LL GK +SC +
Sbjct: 199 -KKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLK 248
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 13/150 (8%)
Query: 109 HKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAV 168
H +I+K +V E+V+ G L D I +G E M+ R ++ +I +AV
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICK-HGRVEE---MEAR-RLFQQILSAV 124
Query: 169 AYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFI 228
Y H +V RD+KP +L AK DF +S + +G+ G+ +
Sbjct: 125 DYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF----LRTSCGSPNYA 177
Query: 229 APEYMSTA-NCNEKSDVYSFGALLLELLTG 257
APE +S + D++S G +L LL G
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 82/195 (42%), Gaps = 26/195 (13%)
Query: 84 MKFGGNLNSEEYCCFNCIAFASQMSHKNI----LKFVGCCLETELPILVFEFVACGTLAD 139
++ G NL + EY S+ ++ K +G E LP V+ F G
Sbjct: 16 LRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAGEG-LP-QVYYFGPXGKYNA 73
Query: 140 RIHDPNGSQLE--------PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILF 191
+ + G LE F +K L +A+++ + + Y+H S+ +++RD+KP L
Sbjct: 74 MVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVH---SKNLIYRDVKPENFLI 130
Query: 192 QEQ-----NVAKFFDFCVSISI--PEGKTHV--NDNNKVIGTFGFIAPEYMSTANCNEKS 242
Q +V DF ++ PE K H+ ++ + GT +++ + +
Sbjct: 131 GRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRD 190
Query: 243 DVYSFGALLLELLTG 257
D+ + G + + L G
Sbjct: 191 DLEALGHMFMYFLRG 205
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVN-DNNKV 221
++ + Y+H S +V RD+KP + E K DF ++ H + +
Sbjct: 152 QMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLA-------RHADAEMTGY 201
Query: 222 IGTFGFIAPEY-MSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE +S + N+ D++S G ++ E+LTGK +
Sbjct: 202 VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTL 241
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 14/154 (9%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 166
+ H NI++ E LVF+ V G L + I E + +I
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI-----VAREYYSEADASHCIQQILE 114
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQN---VAKFFDFCVSISIPEGKTHVNDNNKVIG 223
+V + H+ IV RD+KP +L ++ K DF ++I + +G G
Sbjct: 115 SVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV-QGDQQAWFG--FAG 168
Query: 224 TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
T G+++PE + + D+++ G +L LL G
Sbjct: 169 TPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 69/164 (42%), Gaps = 29/164 (17%)
Query: 152 FLMKHRL--KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNV--AKFFDFCVS-- 205
F+ + +L + +I +A+ YLH ++ I RDIKP LF K DF +S
Sbjct: 163 FVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKE 219
Query: 206 -ISIPEGKTHVNDNNKVIGTFGFIAPEYMSTAN--CNEKSDVYSFGALLLELLTG----- 257
+ G+ + GT F+APE ++T N K D +S G LL LL G
Sbjct: 220 FYKLNNGEYY--GMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFP 277
Query: 258 ---------KRISYSSCFENGEEYFLQELVRKSIESNSFKEIVD 292
+ ++ CFEN L L R + SN VD
Sbjct: 278 GVNDADTISQVLNKKLCFENPNYNVLSPLAR-DLLSNLLNRNVD 320
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 78/202 (38%), Gaps = 41/202 (20%)
Query: 107 MSHKNILKFVGCCLET----ELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM 162
+ H NI++F T + +LV E GTL + + + +K
Sbjct: 82 LQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYL-----KRFKVXKIKVLRSWCR 136
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVND----- 217
+I + +LH + PI+ RD+K I I+ P G + D
Sbjct: 137 QILKGLQFLHTR-TPPIIHRDLKCDNIF---------------ITGPTGSVKIGDLGLAT 180
Query: 218 ------NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEE 271
VIGT F APE +E DVY+FG LE T + YS C +N +
Sbjct: 181 LKRASFAKAVIGTPEFXAPEXYE-EKYDESVDVYAFGXCXLEXATSE-YPYSEC-QNAAQ 237
Query: 272 YFLQELVRKSIESNSFKEIVDP 293
+ + V ++ SF ++ P
Sbjct: 238 IYRR--VTSGVKPASFDKVAIP 257
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVN-DNNKV 221
++ + Y+H S +V RD+KP + E K DF ++ H + +
Sbjct: 134 QMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLA-------RHADAEMTGY 183
Query: 222 IGTFGFIAPEY-MSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE +S + N+ D++S G ++ E+LTGK +
Sbjct: 184 VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTL 223
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 80/194 (41%), Gaps = 34/194 (17%)
Query: 79 RPISVMKFGGNLNSEEYCCFNC---IAFASQMSHKNILKFVGCCLETELPILVFEFVACG 135
R IS KF E N I +++H I+K + + E +V E + G
Sbjct: 166 RIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGG 224
Query: 136 TLADRIHDPNGSQLEPFLMKHRLKVAM------EIANAVAYLHVGFSRPIVFRDIKPSTI 189
L D++ + RLK A ++ AV YLH I+ RD+KP +
Sbjct: 225 ELFDKV-----------VGNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENV 270
Query: 190 LFQEQN---VAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYM---STANCNEKSD 243
L Q + K DF S + G+T + + GT ++APE + TA N D
Sbjct: 271 LLSSQEEDCLIKITDFGHSKIL--GETSL--MRTLCGTPTYLAPEVLVSVGTAGYNRAVD 326
Query: 244 VYSFGALLLELLTG 257
+S G +L L+G
Sbjct: 327 CWSLGVILFICLSG 340
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 130
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFC-VSISIPEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF + E K + + K
Sbjct: 131 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 187
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 188 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 243
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 123
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFC-VSISIPEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF + E K + + K
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 180
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 181 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 25/178 (14%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLAD--RIHDPN-GSQLEPFLMKHRLKVA 161
+ + + ++ + +G CL + + L+ + + G L D R H N GSQ + L
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ-------YLLNWC 125
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFC-VSISIPEGKTHVNDNNK 220
++IA + YL R +V RD+ +L + K DF + E K + + K
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISY--------SSCFENGE 270
V ++A E + +SDV+S+G + EL+T Y SS E GE
Sbjct: 183 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 238
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 80/194 (41%), Gaps = 34/194 (17%)
Query: 79 RPISVMKFGGNLNSEEYCCFNC---IAFASQMSHKNILKFVGCCLETELPILVFEFVACG 135
R IS KF E N I +++H I+K + + E +V E + G
Sbjct: 180 RIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGG 238
Query: 136 TLADRIHDPNGSQLEPFLMKHRLKVAM------EIANAVAYLHVGFSRPIVFRDIKPSTI 189
L D++ + RLK A ++ AV YLH I+ RD+KP +
Sbjct: 239 ELFDKV-----------VGNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENV 284
Query: 190 LFQEQN---VAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYM---STANCNEKSD 243
L Q + K DF S + G+T + + GT ++APE + TA N D
Sbjct: 285 LLSSQEEDCLIKITDFGHSKIL--GETSL--MRTLCGTPTYLAPEVLVSVGTAGYNRAVD 340
Query: 244 VYSFGALLLELLTG 257
+S G +L L+G
Sbjct: 341 CWSLGVILFICLSG 354
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 14/154 (9%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 166
+ H NI++ E LVF+ V G L + I E + +I
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI-----VAREYYSEADASHCIQQILE 114
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQN---VAKFFDFCVSISIPEGKTHVNDNNKVIG 223
+V + H+ IV RD+KP +L ++ K DF ++I + +G G
Sbjct: 115 SVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV-QGDQQAWFG--FAG 168
Query: 224 TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
T G+++PE + + D+++ G +L LL G
Sbjct: 169 TPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 18/156 (11%)
Query: 108 SHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANA 167
H NI++ LVF+ + G L D + ++ K K+ +
Sbjct: 69 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-----TEKVTLSEKETRKIMRALLEV 123
Query: 168 VAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGF 227
+ LH IV RD+KP IL + K DF S + G+ +V GT +
Sbjct: 124 ICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL----REVCGTPSY 176
Query: 228 IAPEYMS-TANCN-----EKSDVYSFGALLLELLTG 257
+APE + + N N ++ D++S G ++ LL G
Sbjct: 177 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 14/156 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I++ + H +I+K + I+V E+ A L D I Q + + +
Sbjct: 65 ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYI-----VQRDKMSEQEARRF 118
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
+I +AV Y H IV RD+KP +L E K DF +S + +G N
Sbjct: 119 FQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG----NFLKT 171
Query: 221 VIGTFGFIAPEYMSTA-NCNEKSDVYSFGALLLELL 255
G+ + APE +S + DV+S G +L +L
Sbjct: 172 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 207
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 14/156 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I++ + H +I+K + I+V E+ A L D I Q + + +
Sbjct: 64 ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYI-----VQRDKMSEQEARRF 117
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
+I +AV Y H IV RD+KP +L E K DF +S + +G N
Sbjct: 118 FQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG----NFLKT 170
Query: 221 VIGTFGFIAPEYMSTA-NCNEKSDVYSFGALLLELL 255
G+ + APE +S + DV+S G +L +L
Sbjct: 171 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 206
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 14/156 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I++ + H +I+K + I+V E+ A L D I Q + + +
Sbjct: 55 ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYI-----VQRDKMSEQEARRF 108
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
+I +AV Y H IV RD+KP +L E K DF +S + +G N
Sbjct: 109 FQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG----NFLKT 161
Query: 221 VIGTFGFIAPEYMSTA-NCNEKSDVYSFGALLLELL 255
G+ + APE +S + DV+S G +L +L
Sbjct: 162 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 197
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 31/169 (18%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I +++H I+K + + E +V E + G L D++ + RLK
Sbjct: 66 IEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKV-----------VGNKRLKE 113
Query: 161 AM------EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQN---VAKFFDFCVSISIPEG 211
A ++ AV YLH I+ RD+KP +L Q + K DF S + G
Sbjct: 114 ATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--G 168
Query: 212 KTHVNDNNKVIGTFGFIAPEYM---STANCNEKSDVYSFGALLLELLTG 257
+T + + GT ++APE + TA N D +S G +L L+G
Sbjct: 169 ETSL--MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 67/160 (41%), Gaps = 15/160 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I S + H ++ + ++++EF++ G L +++ D + E ++
Sbjct: 99 IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSE----DEAVEY 154
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILF--QEQNVAKFFDFCVSISI-PEGKTHVND 217
++ + ++H V D+KP I+F + N K DF ++ + P+ V
Sbjct: 155 MRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV-- 209
Query: 218 NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
GT F APE +D++S G L LL+G
Sbjct: 210 ---TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 31/169 (18%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I +++H I+K + + E +V E + G L D++ + RLK
Sbjct: 65 IEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKV-----------VGNKRLKE 112
Query: 161 AM------EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQN---VAKFFDFCVSISIPEG 211
A ++ AV YLH I+ RD+KP +L Q + K DF S + G
Sbjct: 113 ATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--G 167
Query: 212 KTHVNDNNKVIGTFGFIAPEYM---STANCNEKSDVYSFGALLLELLTG 257
+T + + GT ++APE + TA N D +S G +L L+G
Sbjct: 168 ETSL--MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 31/169 (18%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I +++H I+K + + E +V E + G L D++ + RLK
Sbjct: 72 IEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKV-----------VGNKRLKE 119
Query: 161 AM------EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQN---VAKFFDFCVSISIPEG 211
A ++ AV YLH I+ RD+KP +L Q + K DF S + G
Sbjct: 120 ATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--G 174
Query: 212 KTHVNDNNKVIGTFGFIAPEYM---STANCNEKSDVYSFGALLLELLTG 257
+T + + GT ++APE + TA N D +S G +L L+G
Sbjct: 175 ETSL--MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 31/169 (18%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I +++H I+K + + E +V E + G L D++ + RLK
Sbjct: 66 IEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKV-----------VGNKRLKE 113
Query: 161 AM------EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQN---VAKFFDFCVSISIPEG 211
A ++ AV YLH I+ RD+KP +L Q + K DF S + G
Sbjct: 114 ATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--G 168
Query: 212 KTHVNDNNKVIGTFGFIAPEYM---STANCNEKSDVYSFGALLLELLTG 257
+T + + GT ++APE + TA N D +S G +L L+G
Sbjct: 169 ETSL--MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 31/169 (18%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I +++H I+K + + E +V E + G L D++ + RLK
Sbjct: 66 IEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKV-----------VGNKRLKE 113
Query: 161 AM------EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQN---VAKFFDFCVSISIPEG 211
A ++ AV YLH I+ RD+KP +L Q + K DF S + G
Sbjct: 114 ATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--G 168
Query: 212 KTHVNDNNKVIGTFGFIAPEYM---STANCNEKSDVYSFGALLLELLTG 257
+T + + GT ++APE + TA N D +S G +L L+G
Sbjct: 169 ETSL--MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 14/156 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I++ + H +I+K + I+V E+ A L D I Q + + +
Sbjct: 59 ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYI-----VQRDKMSEQEARRF 112
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNK 220
+I +AV Y H IV RD+KP +L E K DF +S + +G N
Sbjct: 113 FQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG----NFLKT 165
Query: 221 VIGTFGFIAPEYMSTA-NCNEKSDVYSFGALLLELL 255
G+ + APE +S + DV+S G +L +L
Sbjct: 166 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 201
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 18/156 (11%)
Query: 108 SHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANA 167
H NI++ LVF+ + G L D + ++ K K+ +
Sbjct: 82 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-----TEKVTLSEKETRKIMRALLEV 136
Query: 168 VAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGF 227
+ LH IV RD+KP IL + K DF S + G+ +V GT +
Sbjct: 137 ICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK----LREVCGTPSY 189
Query: 228 IAPEYMS-TANCN-----EKSDVYSFGALLLELLTG 257
+APE + + N N ++ D++S G ++ LL G
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 14/154 (9%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 166
+ H NI++ E L+F+ V G L + I E + +I
Sbjct: 78 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI-----VAREYYSEADASHCIQQILE 132
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQ---NVAKFFDFCVSISIPEGKTHVNDNNKVIG 223
AV + H +V RD+KP +L + K DF ++I + EG+ G
Sbjct: 133 AVLHCH---QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFG--FAG 186
Query: 224 TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
T G+++PE + + D+++ G +L LL G
Sbjct: 187 TPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 67/160 (41%), Gaps = 15/160 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I S + H ++ + ++++EF++ G L +++ D + E ++
Sbjct: 205 IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSE----DEAVEY 260
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILF--QEQNVAKFFDFCVSISI-PEGKTHVND 217
++ + ++H V D+KP I+F + N K DF ++ + P+ V
Sbjct: 261 MRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV-- 315
Query: 218 NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
GT F APE +D++S G L LL+G
Sbjct: 316 ---TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 25/168 (14%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I+ +++H NI+K + LVFEF++ L D + + + L+K L
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIKSYL-- 111
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVNDN 218
++ +A+ H S ++ RD+KP +L + K DF + + +P +T+ ++
Sbjct: 112 -FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHE- 165
Query: 219 NKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 166 ---VVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 205
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 81/206 (39%), Gaps = 45/206 (21%)
Query: 109 HKNILKFVGCCL------ETELPILVFEFVA--CGTLADRIHDPNGSQLEPFLMKHRLKV 160
H N+++ C ET+L LVFE V T D++ EP + +K
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKL-TLVFEHVDQDLTTYLDKVP-------EPGVPTETIKD 124
Query: 161 AM-EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS--ISIPEGKTHVND 217
M ++ + +LH S +V RD+KP IL K DF ++ S T
Sbjct: 125 MMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT---- 177
Query: 218 NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQEL 277
V+ T + APE + ++ D++S G + E+ K L
Sbjct: 178 --SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK-----------------PL 218
Query: 278 VRKSIESNSFKEIVDPIIVGEEGLWP 303
R S + + +I+D I + E WP
Sbjct: 219 FRGSSDVDQLGKILDVIGLPGEEDWP 244
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 25/168 (14%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I+ +++H NI+K + LVFEF++ L D + + + L+K L
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIKSYL-- 112
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVNDN 218
++ +A+ H S ++ RD+KP +L + K DF + + +P +T+ ++
Sbjct: 113 -FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHE- 166
Query: 219 NKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 167 ---VVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 206
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 64/134 (47%), Gaps = 10/134 (7%)
Query: 151 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQN-VAKFFDFCVSISIP 209
P L +H ++ + Y+H S ++ RD+KP+ + ++ V K DF ++ +
Sbjct: 116 PLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMD 172
Query: 210 EGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRISYSSCFEN 268
+H ++ + T + +P + + N K+ D+++ G + E+LTGK + F
Sbjct: 173 PHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK-----TLFAG 227
Query: 269 GEEYFLQELVRKSI 282
E +L+ +SI
Sbjct: 228 AHELEQMQLILESI 241
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 14/156 (8%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRI--HDPNGSQLEPFLMKHRLKVAMEI 164
+ H +I++ + + +VFEF+ L I G + H ++ +I
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR---QI 141
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILF-QEQNVA--KFFDFCVSISIPEGKTHVNDNNKV 221
A+ Y H I+ RD+KP +L ++N A K F V+I + G++ + +V
Sbjct: 142 LEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGGRV 196
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
GT F+APE + + DV+ G +L LL+G
Sbjct: 197 -GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 18/156 (11%)
Query: 108 SHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANA 167
H NI++ LVF+ + G L D + ++ K K+ +
Sbjct: 82 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-----TEKVTLSEKETRKIMRALLEV 136
Query: 168 VAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGF 227
+ LH IV RD+KP IL + K DF S + G+ V GT +
Sbjct: 137 ICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK----LRSVCGTPSY 189
Query: 228 IAPEYMS-TANCN-----EKSDVYSFGALLLELLTG 257
+APE + + N N ++ D++S G ++ LL G
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNN 219
+ + N+ +Y+H + I RD+KPS IL + K DF S + + K +
Sbjct: 156 IIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSR-- 211
Query: 220 KVIGTFGFIAPEYMSTANC--NEKSDVYSFGALL 251
GT+ F+ PE+ S + K D++S G L
Sbjct: 212 ---GTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 14/156 (8%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRI--HDPNGSQLEPFLMKHRLKVAMEI 164
+ H +I++ + + +VFEF+ L I G + H ++ +I
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR---QI 139
Query: 165 ANAVAYLHVGFSRPIVFRDIKPSTILF-QEQNVA--KFFDFCVSISIPEGKTHVNDNNKV 221
A+ Y H I+ RD+KP +L ++N A K F V+I + G++ + +V
Sbjct: 140 LEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGGRV 194
Query: 222 IGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
GT F+APE + + DV+ G +L LL+G
Sbjct: 195 -GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 81/207 (39%), Gaps = 45/207 (21%)
Query: 109 HKNILKFVGCCL------ETELPILVFEFVA--CGTLADRIHDPNGSQLEPFLMKHRLKV 160
H N+++ C ET+L LVFE V T D++ EP + +K
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKL-TLVFEHVDQDLTTYLDKVP-------EPGVPTETIKD 124
Query: 161 AM-EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS--ISIPEGKTHVND 217
M ++ + +LH S +V RD+KP IL K DF ++ S T
Sbjct: 125 MMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT---- 177
Query: 218 NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQEL 277
V+ T + APE + ++ D++S G + E+ K L
Sbjct: 178 --SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK-----------------PL 218
Query: 278 VRKSIESNSFKEIVDPIIVGEEGLWPE 304
R S + + +I+D I + E WP
Sbjct: 219 FRGSSDVDQLGKILDVIGLPGEEDWPR 245
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 81/206 (39%), Gaps = 45/206 (21%)
Query: 109 HKNILKFVGCCL------ETELPILVFEFVA--CGTLADRIHDPNGSQLEPFLMKHRLKV 160
H N+++ C ET+L LVFE V T D++ EP + +K
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKL-TLVFEHVDQDLTTYLDKVP-------EPGVPTETIKD 124
Query: 161 AM-EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS--ISIPEGKTHVND 217
M ++ + +LH S +V RD+KP IL K DF ++ S T
Sbjct: 125 MMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT---- 177
Query: 218 NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQEL 277
V+ T + APE + ++ D++S G + E+ K L
Sbjct: 178 --SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK-----------------PL 218
Query: 278 VRKSIESNSFKEIVDPIIVGEEGLWP 303
R S + + +I+D I + E WP
Sbjct: 219 FRGSSDVDQLGKILDVIGLPGEEDWP 244
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 29/169 (17%)
Query: 106 QMSHKNILKFVGCCLETEL--PILVFEFVACGTLADRIHDPNGSQLEP---FLMKHRLKV 160
+++HKNI+K ET +L+ EF CG+L + +P+ + P FL+ V
Sbjct: 63 KLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI-----V 117
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILF----QEQNVAKFFDFCVSISIPEGKTHVN 216
++ + +L IV R+IKP I+ Q+V K DF + + + + V+
Sbjct: 118 LRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS 174
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKS--------DVYSFGALLLELLTG 257
+ GT ++ P+ A + D++S G TG
Sbjct: 175 ----LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 62/145 (42%), Gaps = 17/145 (11%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E++ G L + + + + + + +A++ +++ ++H RD+KP
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---------RDVKP 201
Query: 187 STILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNKVIGTFGFIAPEYMSTANCN----EK 241
+L + K DF + + EG + +GT +I+PE + + + +
Sbjct: 202 DNMLLDKSGHLKLADFGTCMKMNKEGMVRC---DTAVGTPDYISPEVLKSQGGDGYYGRE 258
Query: 242 SDVYSFGALLLELLTGKRISYSSCF 266
D +S G L E+L G Y+
Sbjct: 259 CDWWSVGVFLYEMLVGDTPFYADSL 283
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 16/162 (9%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I ++ HKNI++ + LVFEF C + D L+P ++K L
Sbjct: 52 ICLLKELKHKNIVRLHDVLHSDKKLTLVFEF--CDQDLKKYFDSCNGDLDPEIVKSFL-- 107
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVNDN 218
++ + + H SR ++ RD+KP +L K +F + + IP V
Sbjct: 108 -FQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP-----VRCY 158
Query: 219 NKVIGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKR 259
+ + T + P+ + A S D++S G + EL R
Sbjct: 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGR 200
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 62/145 (42%), Gaps = 17/145 (11%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E++ G L + + + + + + +A++ +++ ++H RD+KP
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---------RDVKP 201
Query: 187 STILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNKVIGTFGFIAPEYMSTANCN----EK 241
+L + K DF + + EG + +GT +I+PE + + + +
Sbjct: 202 DNMLLDKSGHLKLADFGTCMKMNKEGMVRC---DTAVGTPDYISPEVLKSQGGDGYYGRE 258
Query: 242 SDVYSFGALLLELLTGKRISYSSCF 266
D +S G L E+L G Y+
Sbjct: 259 CDWWSVGVFLYEMLVGDTPFYADSL 283
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 62/145 (42%), Gaps = 17/145 (11%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 186
+V E++ G L + + + + + + +A++ +++ ++H RD+KP
Sbjct: 146 MVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---------RDVKP 196
Query: 187 STILFQEQNVAKFFDFCVSISI-PEGKTHVNDNNKVIGTFGFIAPEYMSTANCN----EK 241
+L + K DF + + EG + +GT +I+PE + + + +
Sbjct: 197 DNMLLDKSGHLKLADFGTCMKMNKEGMVRC---DTAVGTPDYISPEVLKSQGGDGYYGRE 253
Query: 242 SDVYSFGALLLELLTGKRISYSSCF 266
D +S G L E+L G Y+
Sbjct: 254 CDWWSVGVFLYEMLVGDTPFYADSL 278
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISI-PEG-KTHVNDNNKVIG 223
+ YLH SR I+ D+K +L + + A DF ++ + P+G + + + G
Sbjct: 197 GLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPG 253
Query: 224 TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
T +APE + +C+ K DV+S ++L +L G
Sbjct: 254 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISI-PEG-KTHVNDNNKVIG 223
+ YLH SR I+ D+K +L + + A DF ++ + P+G + + + G
Sbjct: 178 GLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPG 234
Query: 224 TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
T +APE + +C+ K DV+S ++L +L G
Sbjct: 235 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 78/185 (42%), Gaps = 15/185 (8%)
Query: 78 DRPISVMKFGGNLNSEEYC--CFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACG 135
DR +++ K ++ + + + ++HKNI+ + P E
Sbjct: 49 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT----PQKTLEEFQDV 104
Query: 136 TLADRIHDPNGSQLEPFLMKH-RLKVAM-EIANAVAYLHVGFSRPIVFRDIKPSTILFQE 193
L + D N Q+ + H R+ + ++ + +LH S I+ RD+KPS I+ +
Sbjct: 105 YLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKS 161
Query: 194 QNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
K DF ++ + G + + + T + APE + E D++S G ++ E
Sbjct: 162 DXTLKILDFGLART--AGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 254 LLTGK 258
++ K
Sbjct: 218 MVRHK 222
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 29/169 (17%)
Query: 106 QMSHKNILKFVGCCLETEL--PILVFEFVACGTLADRIHDPNGSQLEP---FLMKHRLKV 160
+++HKNI+K ET +L+ EF CG+L + +P+ + P FL+ V
Sbjct: 63 KLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI-----V 117
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILF----QEQNVAKFFDFCVSISIPEGKTHVN 216
++ + +L IV R+IKP I+ Q+V K DF + + + + V
Sbjct: 118 LRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV- 173
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKS--------DVYSFGALLLELLTG 257
+ GT ++ P+ A + D++S G TG
Sbjct: 174 ---XLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 14/159 (8%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK- 159
I Q+ H N++ + LVFE+ L + G + +H +K
Sbjct: 53 IRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRG------VPEHLVKS 106
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNN 219
+ + AV + H + RD+KP IL + +V K DF + + + +D
Sbjct: 107 ITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE- 162
Query: 220 KVIGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTG 257
+ T + +PE + DV++ G + ELL+G
Sbjct: 163 --VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Query: 156 HRLKVAM-EIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSI--SIPEGK 212
H +K+ + ++ +AY H + ++ RD+KP +L E+ K DF ++ SIP
Sbjct: 100 HNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP--- 153
Query: 213 THVNDNNKVIGTFGFIAPE-YMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFE 267
T DN V T + P+ + + + + + D++ G + E+ TG+ + S E
Sbjct: 154 TKTYDNEVV--TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE 207
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF++ + D + P L+K L
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDL--KKFMDASALTGIPLPLIKSYL- 110
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P +T+ ++
Sbjct: 111 --FQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHE 164
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 165 ----VVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 204
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 68/161 (42%), Gaps = 10/161 (6%)
Query: 102 AFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 161
+ Q H N++ G ++ +++ EF+ G+L + +G F + + +
Sbjct: 60 SIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ----FTVIQLVGML 115
Query: 162 MEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
IA + YL V R + IL V K DF +S + + + + +
Sbjct: 116 RGIAAGMKYLA---DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSAL 172
Query: 222 IGTFG--FIAPEYMSTANCNEKSDVYSFGALLLELLT-GKR 259
G + APE + SDV+S+G ++ E+++ G+R
Sbjct: 173 GGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER 213
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF++ + D + P L+K L
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDL--KKFMDASALTGIPLPLIKSYL- 112
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P +T+ ++
Sbjct: 113 --FQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHE 166
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 167 ----VVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 206
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 59/152 (38%), Gaps = 18/152 (11%)
Query: 147 SQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFD---FC 203
+ +P+ + H +A ++ +A+ +LH + D+KP ILF ++ C
Sbjct: 115 NNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSC 171
Query: 204 VSISIPEGKTHVND----------NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
S+ V D + ++ T + PE + + DV+S G +L E
Sbjct: 172 EEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 231
Query: 254 LLTGKRISYSSCFENGEEYFLQELVRKSIESN 285
G + EN E + E + I S+
Sbjct: 232 YYRG--FTLFQTHENREHLVMMEKILGPIPSH 261
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 59/152 (38%), Gaps = 18/152 (11%)
Query: 147 SQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFD---FC 203
+ +P+ + H +A ++ +A+ +LH + D+KP ILF ++ C
Sbjct: 124 NNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSC 180
Query: 204 VSISIPEGKTHVND----------NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
S+ V D + ++ T + PE + + DV+S G +L E
Sbjct: 181 EEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 240
Query: 254 LLTGKRISYSSCFENGEEYFLQELVRKSIESN 285
G + EN E + E + I S+
Sbjct: 241 YYRG--FTLFQTHENREHLVMMEKILGPIPSH 270
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 25/168 (14%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 160
I+ +++H NI+K + LVFEF+ L D + + + L+K L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKDFMDASALTGIPLPLIKSYL-- 109
Query: 161 AMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVNDN 218
++ +A+ H S ++ RD+KP +L + K DF + + +P +T+ ++
Sbjct: 110 -FQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHE- 163
Query: 219 NKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 164 ---VVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 203
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 59/152 (38%), Gaps = 18/152 (11%)
Query: 147 SQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFD---FC 203
+ +P+ + H +A ++ +A+ +LH + D+KP ILF ++ C
Sbjct: 147 NNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSC 203
Query: 204 VSISIPEGKTHVND----------NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
S+ V D + ++ T + PE + + DV+S G +L E
Sbjct: 204 EEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 263
Query: 254 LLTGKRISYSSCFENGEEYFLQELVRKSIESN 285
G + EN E + E + I S+
Sbjct: 264 YYRG--FTLFQTHENREHLVMMEKILGPIPSH 293
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 13/137 (9%)
Query: 127 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM-EIANAVAYLHVGFSRPIVFRDIK 185
LV ++V H Q P + +K+ M ++ ++AY+H S I RDIK
Sbjct: 96 LVLDYVPATVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIH---SFGICHRDIK 149
Query: 186 PSTILFQ-EQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKS-D 243
P +L + V K DF + + G+ +V+ I + + APE + A S D
Sbjct: 150 PQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----XICSRYYRAPELIFGATDYTSSID 205
Query: 244 VYSFGALLLELLTGKRI 260
V+S G +L ELL G+ I
Sbjct: 206 VWSAGCVLAELLLGQPI 222
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 15/185 (8%)
Query: 78 DRPISVMKFGGNLNSEEYC--CFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACG 135
DR +++ K ++ + + + ++HKNI+ L P E
Sbjct: 49 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISL----LNVFTPQKTLEEFQDV 104
Query: 136 TLADRIHDPNGSQLEPFLMKH-RLKVAM-EIANAVAYLHVGFSRPIVFRDIKPSTILFQE 193
L + D N Q+ + H R+ + ++ + +LH S I+ RD+KPS I+ +
Sbjct: 105 YLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKS 161
Query: 194 QNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
K DF ++ + G + + + T + APE + E D++S G ++ E
Sbjct: 162 DXTLKILDFGLART--AGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 254 LLTGK 258
++ K
Sbjct: 218 MVRHK 222
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 78/184 (42%), Gaps = 15/184 (8%)
Query: 78 DRPISVMKFGGNLNSEEYC--CFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACG 135
+R +++ K ++ + + + ++HKNI+ + P E
Sbjct: 49 ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFT----PQKSLEEFQDV 104
Query: 136 TLADRIHDPNGSQLEPFLMKH-RLKVAM-EIANAVAYLHVGFSRPIVFRDIKPSTILFQE 193
+ + D N SQ+ + H R+ + ++ + +LH S I+ RD+KPS I+ +
Sbjct: 105 YIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKS 161
Query: 194 QNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
K DF ++ + T V+ + + APE + E D++S G ++ E
Sbjct: 162 DATLKILDFGLART---AGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGE 217
Query: 254 LLTG 257
++ G
Sbjct: 218 MIKG 221
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 109
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P V
Sbjct: 110 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRT 159
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 160 YTHEVVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 203
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 109
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P V
Sbjct: 110 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRT 159
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 160 YTHEVVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 203
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 108
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P V
Sbjct: 109 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRT 158
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 159 YTHEVVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 202
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 108
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P V
Sbjct: 109 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRT 158
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 159 YTHEVVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 202
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 110
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P V
Sbjct: 111 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRT 160
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 161 YTHEVVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 204
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 78/184 (42%), Gaps = 15/184 (8%)
Query: 78 DRPISVMKFGGNLNSEEYC--CFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACG 135
+R +++ K ++ + + + ++HKNI+ + P E
Sbjct: 49 ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFT----PQKSLEEFQDV 104
Query: 136 TLADRIHDPNGSQLEPFLMKH-RLKVAM-EIANAVAYLHVGFSRPIVFRDIKPSTILFQE 193
+ + D N SQ+ + H R+ + ++ + +LH S I+ RD+KPS I+ +
Sbjct: 105 YIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKS 161
Query: 194 QNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
K DF ++ + T V+ + + APE + E D++S G ++ E
Sbjct: 162 DATLKILDFGLART---AGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGE 217
Query: 254 LLTG 257
++ G
Sbjct: 218 MIKG 221
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFG 226
+ +LH S I+ RD+KPS I+ + K DF ++ + T+ V+ +
Sbjct: 136 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---ASTNFMMTPYVVTRY- 188
Query: 227 FIAPEYMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ APE + E D++S G ++ EL+ G I
Sbjct: 189 YRAPEVILGMGYKENVDIWSVGCIMGELVKGSVI 222
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 78/185 (42%), Gaps = 15/185 (8%)
Query: 78 DRPISVMKFGGNLNSEEYC--CFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACG 135
DR +++ K ++ + + + ++HKNI+ + P E
Sbjct: 49 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT----PQKTLEEFQDV 104
Query: 136 TLADRIHDPNGSQLEPFLMKH-RLKVAM-EIANAVAYLHVGFSRPIVFRDIKPSTILFQE 193
L + D N Q+ + H R+ + ++ + +LH S I+ RD+KPS I+ +
Sbjct: 105 YLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKS 161
Query: 194 QNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
K DF ++ + G + + + T + APE + E D++S G ++ E
Sbjct: 162 DXTLKILDFGLART--AGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 254 LLTGK 258
++ K
Sbjct: 218 MVRHK 222
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 109
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P V
Sbjct: 110 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRT 159
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 160 YTHEVVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 203
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 108
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P V
Sbjct: 109 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRT 158
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 159 YTHEVVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 202
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 150 EPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI- 208
+P ++H ++ + Y+H S ++ RD+KPS +L E K DF ++ +
Sbjct: 153 QPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209
Query: 209 PEGKTHVNDNNKVIGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
H + + T + APE M S + D++S G + E+L +++
Sbjct: 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL 262
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 109
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P +T+ ++
Sbjct: 110 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHE 163
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 164 ----VVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 203
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKH-RLK 159
IA S++ H NI+K + +FE L H +G L F+ +H RL
Sbjct: 80 IAILSRVEHANIIKVLD----------IFENQGFFQLVMEKHG-SGLDLFAFIDRHPRLD 128
Query: 160 ------VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKT 213
+ ++ +AV YL + + I+ RDIK I+ E K DF + + GK
Sbjct: 129 EPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKL 185
Query: 214 HVNDNNKVIGTFGFIAPEY-MSTANCNEKSDVYSFGALLLELL 255
GT + APE M + +++S G L L+
Sbjct: 186 FYT----FCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 150 EPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI- 208
+P ++H ++ + Y+H S ++ RD+KPS +L E K DF ++ +
Sbjct: 154 QPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC 210
Query: 209 PEGKTHVNDNNKVIGTFGFIAPEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
H + + T + APE M S + D++S G + E+L +++
Sbjct: 211 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL 263
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 109
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P V
Sbjct: 110 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRT 159
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 160 YTHEVVTLWYRAPEILLGXKYYSTA-----VDIWSLGCIFAEMVTRRAL 203
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 116
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P V
Sbjct: 117 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRT 166
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 167 YTHEVVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 210
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISI-PEG-KTHVNDNNKVIG 223
+ YLH +R I+ D+K +L + + A DF ++ + P+G + + + G
Sbjct: 176 GLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 232
Query: 224 TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
T +APE + C+ K D++S ++L +L G
Sbjct: 233 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISI-PEG-KTHVNDNNKVIG 223
+ YLH +R I+ D+K +L + + A DF ++ + P+G + + + G
Sbjct: 162 GLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 218
Query: 224 TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
T +APE + C+ K D++S ++L +L G
Sbjct: 219 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 21/161 (13%)
Query: 106 QMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 165
Q H+N++ F+G C+ ++ TL + D +++ + K R ++A EI
Sbjct: 85 QTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD---AKIVLDVNKTR-QIAQEIV 140
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNV--AKFFDFCVSISIPEGKTHVNDNNKVI- 222
+ YLH ++ I+ +D+K + + V F F +S + G+ D ++
Sbjct: 141 KGMGYLH---AKGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRR--EDKLRIQN 195
Query: 223 GTFGFIAPEYMSTANCN---------EKSDVYSFGALLLEL 254
G +APE + + + + SDV++ G + EL
Sbjct: 196 GWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 20/145 (13%)
Query: 127 LVFEFVACG---TLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRD 183
LV ++ G TL + D ++ F + + +A++ + + Y+H RD
Sbjct: 151 LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLA-EMVIAIDSVHQLHYVH---------RD 200
Query: 184 IKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMST-----ANC 238
IKP IL + DF + + E T ++ +GT +I+PE +
Sbjct: 201 IKPDNILMDMNGHIRLADFGSCLKLMEDGT--VQSSVAVGTPDYISPEILQAMEGGKGRY 258
Query: 239 NEKSDVYSFGALLLELLTGKRISYS 263
+ D +S G + E+L G+ Y+
Sbjct: 259 GPECDWWSLGVCMYEMLYGETPFYA 283
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 15/185 (8%)
Query: 78 DRPISVMKFGGNLNSEEYC--CFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACG 135
DR +++ K ++ + + + ++HKNI+ L P E
Sbjct: 49 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISL----LNVFTPQKTLEEFQDV 104
Query: 136 TLADRIHDPNGSQLEPFLMKH-RLKVAM-EIANAVAYLHVGFSRPIVFRDIKPSTILFQE 193
L + D N Q+ + H R+ + ++ + +LH S I+ RD+KPS I+ +
Sbjct: 105 YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKS 161
Query: 194 QNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
K DF ++ + G + + + T + APE + E D++S G ++ E
Sbjct: 162 DXTLKILDFGLART--AGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 254 LLTGK 258
++ K
Sbjct: 218 MVRHK 222
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISI-PEG-KTHVNDNNKVIG 223
+ YLH +R I+ D+K +L + + A DF ++ + P+G + + + G
Sbjct: 178 GLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 234
Query: 224 TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
T +APE + C+ K D++S ++L +L G
Sbjct: 235 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 14/154 (9%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 166
+ H NI++ E L+F+ V G L + I E + +I
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI-----VAREYYSEADASHCIQQILE 121
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQ---NVAKFFDFCVSISIPEGKTHVNDNNKVIG 223
AV + H +V R++KP +L + K DF ++I + EG+ G
Sbjct: 122 AVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFG--FAG 175
Query: 224 TFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
T G+++PE + + D+++ G +L LL G
Sbjct: 176 TPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 57 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 113
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P V
Sbjct: 114 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRT 163
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 164 YTHEVVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 207
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 15/185 (8%)
Query: 78 DRPISVMKFGGNLNSEEYC--CFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACG 135
DR +++ K ++ + + + ++HKNI+ L P E
Sbjct: 42 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL----LNVFTPQKTLEEFQDV 97
Query: 136 TLADRIHDPNGSQLEPFLMKH-RLKVAM-EIANAVAYLHVGFSRPIVFRDIKPSTILFQE 193
L + D N Q+ + H R+ + ++ + +LH S I+ RD+KPS I+ +
Sbjct: 98 YLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKS 154
Query: 194 QNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
K DF ++ + G + + + T + APE + E D++S G ++ E
Sbjct: 155 DXTLKILDFGLART--AGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 210
Query: 254 LLTGK 258
++ K
Sbjct: 211 MVRHK 215
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 110
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P +T+ ++
Sbjct: 111 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHE 164
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 165 ----VVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 204
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 109
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P +T+ ++
Sbjct: 110 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHE 163
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 164 ----VVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 109
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P +T+ ++
Sbjct: 110 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHE 163
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 164 ----VVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 203
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 108
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P +T+ ++
Sbjct: 109 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHE 162
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 163 ----VVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 202
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 116
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P V
Sbjct: 117 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRT 166
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 167 YTHEVVTLWYRAPEILLGXKYYSTA-----VDIWSLGCIFAEMVTRRAL 210
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 26/165 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL-- 158
I++ + H +I+K ++V E+ A G L D I + K R+
Sbjct: 60 ISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYI-----------VEKKRMTE 107
Query: 159 ----KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTH 214
+ +I A+ Y H IV RD+KP +L + K DF +S + +G
Sbjct: 108 DEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG--- 161
Query: 215 VNDNNKVIGTFGFIAPEYMSTA-NCNEKSDVYSFGALLLELLTGK 258
N G+ + APE ++ + DV+S G +L +L G+
Sbjct: 162 -NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 109
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P +T+ ++
Sbjct: 110 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHE 163
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 164 ----VVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 203
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 108
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P +T+ ++
Sbjct: 109 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHE 162
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 163 ----VVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 202
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 111
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P +T+ ++
Sbjct: 112 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHE 165
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 166 ----VVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 205
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 110
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P +T+ ++
Sbjct: 111 --FQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHE 164
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 165 ----VVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 204
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 112
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P +T+ ++
Sbjct: 113 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHE 166
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 167 ----VVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 206
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 111
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P +T+ ++
Sbjct: 112 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHE 165
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 166 ----VVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 205
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 17/122 (13%)
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQE---QNVAKFFDFCVSISIPEGKTH 214
+++ +I V YLH IV D+KP IL K DF +S I H
Sbjct: 134 IRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI----GH 186
Query: 215 VNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCF--ENGEEY 272
+ +++GT ++APE ++ +D+++ G + LLT ++S F E+ +E
Sbjct: 187 ACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT-----HTSPFVGEDNQET 241
Query: 273 FL 274
+L
Sbjct: 242 YL 243
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 111
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P +T+ ++
Sbjct: 112 --FQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHE 165
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 166 ----VVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 205
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFG 226
+ +LH S I+ RD+KPS I+ + K DF ++ + T +V+ +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPEVVTRY- 190
Query: 227 FIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ APE + E D++S G ++ E++ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 112
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P +T+ ++
Sbjct: 113 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHE 166
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 167 ----VVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 206
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 110
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P V
Sbjct: 111 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRT 160
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 161 YXHEVVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 204
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 57 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 113
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P +T+ ++
Sbjct: 114 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHE 167
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 168 ----VVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 207
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
++ ++AY+H S I RDIKP +L + V K DF + + G+ +V+
Sbjct: 134 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----X 186
Query: 222 IGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
I + + APE + A S DV+S G +L ELL G+ I
Sbjct: 187 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 226
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
++ ++AY+H S I RDIKP +L + V K DF + + G+ +V+
Sbjct: 130 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----X 182
Query: 222 IGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
I + + APE + A S DV+S G +L ELL G+ I
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
++ ++AY+H S I RDIKP +L + V K DF + + G+ +V+
Sbjct: 149 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----X 201
Query: 222 IGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
I + + APE + A S DV+S G +L ELL G+ I
Sbjct: 202 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 241
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
++ ++AY+H S I RDIKP +L + V K DF + + G+ +V+
Sbjct: 131 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----X 183
Query: 222 IGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
I + + APE + A S DV+S G +L ELL G+ I
Sbjct: 184 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 223
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Query: 98 FNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR 157
F + S++SHK+++ G C+ + ILV EFV G+L D N + + + +
Sbjct: 60 FEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSL-DTYLKKNKNCIN---ILWK 115
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILF-QEQNVAKFFDFCVSISIPEGKTHVN 216
L+VA ++A A+ +L ++ ++ IL +E++ + +S P V
Sbjct: 116 LEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVL 172
Query: 217 DNNKVIGTFGFIAPEYMSTA-NCNEKSDVYSFGALLLELLTG 257
+ + ++ PE + N N +D +SFG L E+ +G
Sbjct: 173 PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
++ ++AY+H S I RDIKP +L + V K DF + + G+ +V+
Sbjct: 130 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----X 182
Query: 222 IGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
I + + APE + A S DV+S G +L ELL G+ I
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
++ ++AY+H S I RDIKP +L + V K DF + + G+ +V+
Sbjct: 164 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----X 216
Query: 222 IGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
I + + APE + A S DV+S G +L ELL G+ I
Sbjct: 217 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 256
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
++ ++AY+H S I RDIKP +L + V K DF + + G+ +V+
Sbjct: 138 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----X 190
Query: 222 IGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
I + + APE + A S DV+S G +L ELL G+ I
Sbjct: 191 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 230
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
++ ++AY+H S I RDIKP +L + V K DF + + G+ +V+
Sbjct: 142 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----X 194
Query: 222 IGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
I + + APE + A S DV+S G +L ELL G+ I
Sbjct: 195 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 234
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
++ ++AY+H S I RDIKP +L + V K DF + + G+ +V+
Sbjct: 142 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----X 194
Query: 222 IGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
I + + APE + A S DV+S G +L ELL G+ I
Sbjct: 195 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 234
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFG 226
+ +LH S I+ RD+KPS I+ + K DF ++ + T V+ +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMMTPYVVTRY- 190
Query: 227 FIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ APE + E D++S G ++ E++ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 78/184 (42%), Gaps = 15/184 (8%)
Query: 78 DRPISVMKFGGNLNSEEYC--CFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACG 135
+R +++ K ++ + + + ++HKNI+ + P E
Sbjct: 49 ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFT----PQKSLEEFQDV 104
Query: 136 TLADRIHDPNGSQLEPFLMKH-RLKVAM-EIANAVAYLHVGFSRPIVFRDIKPSTILFQE 193
+ + D N SQ+ + H R+ + ++ + +LH S I+ RD+KPS I+ +
Sbjct: 105 YIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKS 161
Query: 194 QNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
K DF ++ + T V+ + + APE + E D++S G ++ E
Sbjct: 162 DATLKILDFGLART---AGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 254 LLTG 257
++ G
Sbjct: 218 MIKG 221
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
++ ++AY+H S I RDIKP +L + V K DF + + G+ +V+
Sbjct: 130 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----X 182
Query: 222 IGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
I + + APE + A S DV+S G +L ELL G+ I
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFG 226
+ +LH S I+ RD+KPS I+ + K DF ++ + T V+ +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMMTPYVVTRY- 190
Query: 227 FIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ APE + E D++S G ++ E++ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
++ ++AY+H S I RDIKP +L + V K DF + + G+ +V+
Sbjct: 130 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----Y 182
Query: 222 IGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
I + + APE + A S DV+S G +L ELL G+ I
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
++ ++AY+H S I RDIKP +L + V K DF + + G+ +V+
Sbjct: 130 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----Y 182
Query: 222 IGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
I + + APE + A S DV+S G +L ELL G+ I
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
++ ++AY+H S I RDIKP +L + V K DF + + G+ +V+
Sbjct: 143 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----Y 195
Query: 222 IGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
I + + APE + A S DV+S G +L ELL G+ I
Sbjct: 196 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 235
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVA--CGTLADRIHDPNGSQLEPFLMKHRL 158
I+ +++H NI+K + LVFEF+ T D S L +
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMD------ASALTGIPLPLIK 109
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVN 216
++ +A+ H S ++ RD+KP +L + K DF + + +P +T+ +
Sbjct: 110 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXH 165
Query: 217 DNNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ + T + APE Y STA D++S G + E++T + +
Sbjct: 166 E----VVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 206
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
++ ++AY+H S I RDIKP +L + V K DF + + G+ +V+
Sbjct: 164 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----Y 216
Query: 222 IGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
I + + APE + A S DV+S G +L ELL G+ I
Sbjct: 217 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 256
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
++ ++AY+H S I RDIKP +L + V K DF + + G+ +V+
Sbjct: 130 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----Y 182
Query: 222 IGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
I + + APE + A S DV+S G +L ELL G+ I
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
++ ++AY+H S I RDIKP +L + V K DF + + G+ +V+
Sbjct: 158 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----Y 210
Query: 222 IGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
I + + APE + A S DV+S G +L ELL G+ I
Sbjct: 211 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 250
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
++ ++AY+H S I RDIKP +L + V K DF + + G+ +V+
Sbjct: 135 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----Y 187
Query: 222 IGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
I + + APE + A S DV+S G +L ELL G+ I
Sbjct: 188 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 227
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
++ ++AY+H S I RDIKP +L + V K DF + + G+ +V+
Sbjct: 166 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----Y 218
Query: 222 IGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
I + + APE + A S DV+S G +L ELL G+ I
Sbjct: 219 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 258
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
++ ++AY+H S I RDIKP +L + V K DF + + G+ +V+
Sbjct: 209 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----Y 261
Query: 222 IGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
I + + APE + A S DV+S G +L ELL G+ I
Sbjct: 262 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 301
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 163 EIANAVAYLHVGFSRPIVFRDIKPSTILFQ-EQNVAKFFDFCVSISIPEGKTHVNDNNKV 221
++ ++AY+H S I RDIKP +L + V K DF + + G+ +V+
Sbjct: 168 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----Y 220
Query: 222 IGTFGFIAPEYMSTANCNEKS-DVYSFGALLLELLTGKRI 260
I + + APE + A S DV+S G +L ELL G+ I
Sbjct: 221 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 260
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFG 226
+ +LH S I+ RD+KPS I+ + K DF ++ + V + T
Sbjct: 140 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMV----PFVVTRY 192
Query: 227 FIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ APE + E D++S G ++ E++ G
Sbjct: 193 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFEF+ + D + P L+K L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL--KKFMDASALTGIPLPLIKSYL- 109
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +++ H S ++ RD+KP +L + K DF + + +P V
Sbjct: 110 --FQLLQGLSFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRT 159
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 160 YTHEVVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 203
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 9/162 (5%)
Query: 98 FNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR 157
F + S++SHK+++ G C + ILV EFV G+L D N + + + +
Sbjct: 60 FEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSL-DTYLKKNKNCIN---ILWK 115
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILF-QEQNVAKFFDFCVSISIPEGKTHVN 216
L+VA ++A A+ +L ++ ++ IL +E++ + +S P V
Sbjct: 116 LEVAKQLAWAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVL 172
Query: 217 DNNKVIGTFGFIAPEYMSTA-NCNEKSDVYSFGALLLELLTG 257
+ + ++ PE + N N +D +SFG L E+ +G
Sbjct: 173 PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFG 226
+ +LH S I+ RD+KPS I+ + K DF ++ + T V+ +
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRY- 191
Query: 227 FIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ APE + E D++S G ++ E++ G
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFG 226
+ +LH S I+ RD+KPS I+ + K DF ++ + T V+ +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRY- 190
Query: 227 FIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ APE + E D++S G ++ E++ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFG 226
+ +LH S I+ RD+KPS I+ + K DF ++ + T V+ +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRY- 190
Query: 227 FIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ APE + E D++S G ++ E++ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFG 226
+ +LH S I+ RD+KPS I+ + K DF ++ + T V+ +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRY- 190
Query: 227 FIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ APE + E D++S G ++ E++ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 17/116 (14%)
Query: 153 LMKH------RLK-VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVS 205
LMKH R++ + ++ + Y+H I+ RD+KP + E K DF ++
Sbjct: 119 LMKHEKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLA 175
Query: 206 ISIPEGKTHVNDNNKVIGTFGFIAPEY-MSTANCNEKSDVYSFGALLLELLTGKRI 260
+ ++ + T + APE ++ + D++S G ++ E++TGK +
Sbjct: 176 ------RQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTL 225
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 68/170 (40%), Gaps = 29/170 (17%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVA--CGTLADRIHDPNGSQLEPFLMKHRL 158
I+ +++H NI+K + LVFE V T D S L +
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMD------ASALTGIPLPLIK 105
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVN 216
++ +A+ H S ++ RD+KP +L + K DF + + +P V
Sbjct: 106 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VR 157
Query: 217 DNNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 158 TYTHEVVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 202
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 27/169 (15%)
Query: 101 IAFASQMSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPF-LMKHRLK 159
I+ +++H NI+K + LVFE V + D + P L+K L
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDL--KKFMDASALTGIPLPLIKSYL- 112
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCV--SISIPEGKTHVND 217
++ +A+ H S ++ RD+KP +L + K DF + + +P +T+ ++
Sbjct: 113 --FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHE 166
Query: 218 NNKVIGTFGFIAPE------YMSTANCNEKSDVYSFGALLLELLTGKRI 260
+ T + APE Y STA D++S G + E++T + +
Sbjct: 167 ----VVTLWYRAPEILLGCKYYSTA-----VDIWSLGCIFAEMVTRRAL 206
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 111 NILKFVGCCLE--TELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM-EIANA 167
NI+K + + ++ P LVFE+ I++ + QL L ++ M E+ A
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEY---------INNTDFKQLYQILTDFDIRFYMYELLKA 144
Query: 168 VAYLHVGFSRPIVFRDIKPSTILF-QEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFG 226
+ Y H S+ I+ RD+KP ++ +Q + D+ ++ E + N + +
Sbjct: 145 LDYCH---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLA----EFYHPAQEYNVRVASRY 197
Query: 227 FIAPEYMSTANCNEKS-DVYSFGALLLELL 255
F PE + + S D++S G +L ++
Sbjct: 198 FKGPELLVDYQMYDYSLDMWSLGCMLASMI 227
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFG 226
+ +LH S I+ RD+KPS I+ + K DF ++ + G + + + V T
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVV--TRY 190
Query: 227 FIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ APE + E D++S G ++ E++ K
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 111 NILKFVGCCLE--TELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM-EIANA 167
NI+K + + ++ P LVFE+ I++ + QL L ++ M E+ A
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEY---------INNTDFKQLYQILTDFDIRFYMYELLKA 149
Query: 168 VAYLHVGFSRPIVFRDIKPSTILF-QEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFG 226
+ Y H S+ I+ RD+KP ++ +Q + D+ ++ E + N + +
Sbjct: 150 LDYCH---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLA----EFYHPAQEYNVRVASRY 202
Query: 227 FIAPEYMSTANCNEKS-DVYSFGALLLELL 255
F PE + + S D++S G +L ++
Sbjct: 203 FKGPELLVDYQMYDYSLDMWSLGCMLASMI 232
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 15/185 (8%)
Query: 78 DRPISVMKFGGNLNSEEYC--CFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACG 135
DR +++ K ++ + + + ++HKNI+ L P E
Sbjct: 48 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL----LNVFTPQKTLEEFQDV 103
Query: 136 TLADRIHDPNGSQLEPFLMKH-RLKVAM-EIANAVAYLHVGFSRPIVFRDIKPSTILFQE 193
L + D N Q+ + H R+ + ++ + +LH S I+ RD+KPS I+ +
Sbjct: 104 YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKS 160
Query: 194 QNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
K DF ++ + G + + + T + APE + E D++S G ++ E
Sbjct: 161 DCTLKILDFGLART--AGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 216
Query: 254 LLTGK 258
++ K
Sbjct: 217 MVRHK 221
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 15/185 (8%)
Query: 78 DRPISVMKFGGNLNSEEYC--CFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACG 135
DR +++ K ++ + + + ++HKNI+ L P E
Sbjct: 49 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL----LNVFTPQKTLEEFQDV 104
Query: 136 TLADRIHDPNGSQLEPFLMKH-RLKVAM-EIANAVAYLHVGFSRPIVFRDIKPSTILFQE 193
L + D N Q+ + H R+ + ++ + +LH S I+ RD+KPS I+ +
Sbjct: 105 YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKS 161
Query: 194 QNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
K DF ++ + G + + + T + APE + E D++S G ++ E
Sbjct: 162 DCTLKILDFGLART--AGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 254 LLTGK 258
++ K
Sbjct: 218 MVRHK 222
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 15/185 (8%)
Query: 78 DRPISVMKFGGNLNSEEYC--CFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACG 135
DR +++ K ++ + + + ++HKNI+ L P E
Sbjct: 43 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL----LNVFTPQKTLEEFQDV 98
Query: 136 TLADRIHDPNGSQLEPFLMKH-RLKVAM-EIANAVAYLHVGFSRPIVFRDIKPSTILFQE 193
L + D N Q+ + H R+ + ++ + +LH S I+ RD+KPS I+ +
Sbjct: 99 YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKS 155
Query: 194 QNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
K DF ++ + G + + + T + APE + E D++S G ++ E
Sbjct: 156 DCTLKILDFGLART--AGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 211
Query: 254 LLTGK 258
++ K
Sbjct: 212 MVRHK 216
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 15/185 (8%)
Query: 78 DRPISVMKFGGNLNSEEYC--CFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACG 135
DR +++ K ++ + + + ++HKNI+ L P E
Sbjct: 50 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL----LNVFTPQKTLEEFQDV 105
Query: 136 TLADRIHDPNGSQLEPFLMKH-RLKVAM-EIANAVAYLHVGFSRPIVFRDIKPSTILFQE 193
L + D N Q+ + H R+ + ++ + +LH S I+ RD+KPS I+ +
Sbjct: 106 YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKS 162
Query: 194 QNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
K DF ++ + G + + + T + APE + E D++S G ++ E
Sbjct: 163 DCTLKILDFGLART--AGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 218
Query: 254 LLTGK 258
++ K
Sbjct: 219 MVRHK 223
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 15/185 (8%)
Query: 78 DRPISVMKFGGNLNSEEYC--CFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACG 135
DR +++ K ++ + + + ++HKNI+ L P E
Sbjct: 49 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL----LNVFTPQKTLEEFQDV 104
Query: 136 TLADRIHDPNGSQLEPFLMKH-RLKVAM-EIANAVAYLHVGFSRPIVFRDIKPSTILFQE 193
L + D N Q+ + H R+ + ++ + +LH S I+ RD+KPS I+ +
Sbjct: 105 YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKS 161
Query: 194 QNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
K DF ++ + G + + + T + APE + E D++S G ++ E
Sbjct: 162 DCTLKILDFGLART--AGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 254 LLTGK 258
++ K
Sbjct: 218 MVRHK 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 15/185 (8%)
Query: 78 DRPISVMKFGGNLNSEEYC--CFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACG 135
DR +++ K ++ + + + ++HKNI+ L P E
Sbjct: 43 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL----LNVFTPQKTLEEFQDV 98
Query: 136 TLADRIHDPNGSQLEPFLMKH-RLKVAM-EIANAVAYLHVGFSRPIVFRDIKPSTILFQE 193
L + D N Q+ + H R+ + ++ + +LH S I+ RD+KPS I+ +
Sbjct: 99 YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKS 155
Query: 194 QNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
K DF ++ + G + + + T + APE + E D++S G ++ E
Sbjct: 156 DCTLKILDFGLART--AGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 211
Query: 254 LLTGK 258
++ K
Sbjct: 212 MVRHK 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 15/185 (8%)
Query: 78 DRPISVMKFGGNLNSEEYC--CFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACG 135
DR +++ K ++ + + + ++HKNI+ L P E
Sbjct: 42 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL----LNVFTPQKTLEEFQDV 97
Query: 136 TLADRIHDPNGSQLEPFLMKH-RLKVAM-EIANAVAYLHVGFSRPIVFRDIKPSTILFQE 193
L + D N Q+ + H R+ + ++ + +LH S I+ RD+KPS I+ +
Sbjct: 98 YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKS 154
Query: 194 QNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
K DF ++ + G + + + T + APE + E D++S G ++ E
Sbjct: 155 DCTLKILDFGLART--AGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 210
Query: 254 LLTGK 258
++ K
Sbjct: 211 MVRHK 215
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 15/185 (8%)
Query: 78 DRPISVMKFGGNLNSEEYC--CFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACG 135
DR +++ K ++ + + + ++HKNI+ L P E
Sbjct: 87 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL----LNVFTPQKTLEEFQDV 142
Query: 136 TLADRIHDPNGSQLEPFLMKH-RLKVAM-EIANAVAYLHVGFSRPIVFRDIKPSTILFQE 193
L + D N Q+ + H R+ + ++ + +LH S I+ RD+KPS I+ +
Sbjct: 143 YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKS 199
Query: 194 QNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
K DF ++ + G + + + T + APE + E D++S G ++ E
Sbjct: 200 DCTLKILDFGLART--AGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 255
Query: 254 LLTGK 258
++ K
Sbjct: 256 MVRHK 260
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 15/185 (8%)
Query: 78 DRPISVMKFGGNLNSEEYC--CFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACG 135
DR +++ K ++ + + + ++HKNI+ L P E
Sbjct: 50 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL----LNVFTPQKTLEEFQDV 105
Query: 136 TLADRIHDPNGSQLEPFLMKH-RLKVAM-EIANAVAYLHVGFSRPIVFRDIKPSTILFQE 193
L + D N Q+ + H R+ + ++ + +LH S I+ RD+KPS I+ +
Sbjct: 106 YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKS 162
Query: 194 QNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
K DF ++ + G + + + T + APE + E D++S G ++ E
Sbjct: 163 DCTLKILDFGLART--AGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 218
Query: 254 LLTGK 258
++ K
Sbjct: 219 MVRHK 223
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 14/93 (15%)
Query: 179 IVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIG----------TFGFI 228
++ RD+KPS +L K DF ++ I E DN++ G T +
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA---DNSEPTGQQSGMTEXVATRWYR 189
Query: 229 APEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
APE M ++A + DV+S G +L EL + I
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 14/93 (15%)
Query: 179 IVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIG----------TFGFI 228
++ RD+KPS +L K DF ++ I E DN++ G T +
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA---DNSEPTGQQSGMTEYVATRWYR 189
Query: 229 APEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
APE M ++A + DV+S G +L EL + I
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 34.3 bits (77), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 74/167 (44%), Gaps = 23/167 (13%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLADRI-----HDPNGSQLEPFLMKHRLK 159
+++ H N++ +G + + ++F + + G L + + H GS + +K L+
Sbjct: 67 ARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 126
Query: 160 ------VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKT 213
+ +IA + YL S +V +D+ +L ++ K D + +
Sbjct: 127 PPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREV----- 178
Query: 214 HVNDNNKVIGT----FGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ D K++G ++APE + + SD++S+G +L E+ +
Sbjct: 179 YAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 34.3 bits (77), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 14/93 (15%)
Query: 179 IVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIG----------TFGFI 228
++ RD+KPS +L K DF ++ I E DN++ G T +
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA---DNSEPTGQQSGMVEFVATRWYR 189
Query: 229 APEYM-STANCNEKSDVYSFGALLLELLTGKRI 260
APE M ++A + DV+S G +L EL + I
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 15/185 (8%)
Query: 78 DRPISVMKFGGNLNSEEYC--CFNCIAFASQMSHKNILKFVGCCLETELPILVFEFVACG 135
DR +++ K ++ + + + ++HKNI+ L P E
Sbjct: 87 DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL----LNVFTPQKTLEEFQDV 142
Query: 136 TLADRIHDPNGSQLEPFLMKH-RLKVAM-EIANAVAYLHVGFSRPIVFRDIKPSTILFQE 193
L + D N Q+ + H R+ + ++ + +LH S I+ RD+KPS I+ +
Sbjct: 143 YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKS 199
Query: 194 QNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLE 253
K DF ++ + G + + + T + APE + E D++S G ++ E
Sbjct: 200 DCTLKILDFGLART--AGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 255
Query: 254 LLTGK 258
++ K
Sbjct: 256 MVRHK 260
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 74/167 (44%), Gaps = 23/167 (13%)
Query: 105 SQMSHKNILKFVGCCLETELPILVFEFVACGTLADRI-----HDPNGSQLEPFLMKHRLK 159
+++ H N++ +G + + ++F + + G L + + H GS + +K L+
Sbjct: 84 ARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 143
Query: 160 ------VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKT 213
+ +IA + YL S +V +D+ +L ++ K D + +
Sbjct: 144 PPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREV----- 195
Query: 214 HVNDNNKVIGT----FGFIAPEYMSTANCNEKSDVYSFGALLLELLT 256
+ D K++G ++APE + + SD++S+G +L E+ +
Sbjct: 196 YAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 71/192 (36%), Gaps = 27/192 (14%)
Query: 89 NLNSEEYCC---FNCIAFASQMSHKNILKFVGCCLETELPI-----LVFEFVACGTLADR 140
N+ S+ + C I + H NIL + E P LV E + LA
Sbjct: 65 NILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTD-LAQV 123
Query: 141 IHDPN---GSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVA 197
IHD Q + M H L LHV +V RD+ P IL + N
Sbjct: 124 IHDQRIVISPQHIQYFMYHIL----------LGLHVLHEAGVVHRDLHPGNILLADNNDI 173
Query: 198 KFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPE-YMSTANCNEKSDVYSFGALLLELLT 256
DF ++ E N + V + + APE M + D++S G ++ E+
Sbjct: 174 TICDFNLA---REDTADANKTHYVTHRW-YRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
Query: 257 GKRISYSSCFEN 268
K + S F N
Sbjct: 230 RKALFRGSTFYN 241
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 22/169 (13%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNG-SQLEPFLMKHRLKVAMEIA 165
+ H NI++F L +V E+ + G L +RI + S+ E +L + A
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYA 131
Query: 166 NAVAYLHVGFSRPIVFRDIKPSTILFQEQNVA--KFFDFCVSISIPEGKTHVNDNNKVIG 223
+A+ H RD+K L K DF S + + +G
Sbjct: 132 HAMQVAH---------RDLKLENTLLDGSPAPRLKIADFGYS----KASVLHSQPKSAVG 178
Query: 224 TFGFIAPEYMSTANCNEK-SDVYSFGALLLELLTGKRISYSSCFENGEE 271
T +IAPE + + K +DV+S G L +L G + FE+ EE
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG-----AYPFEDPEE 222
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 71/192 (36%), Gaps = 27/192 (14%)
Query: 89 NLNSEEYCC---FNCIAFASQMSHKNILKFVGCCLETELPI-----LVFEFVACGTLADR 140
N+ S+ + C I + H NIL + E P LV E + LA
Sbjct: 65 NILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTD-LAQV 123
Query: 141 IHDPN---GSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVA 197
IHD Q + M H L LHV +V RD+ P IL + N
Sbjct: 124 IHDQRIVISPQHIQYFMYHIL----------LGLHVLHEAGVVHRDLHPGNILLADNNDI 173
Query: 198 KFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPE-YMSTANCNEKSDVYSFGALLLELLT 256
DF ++ E N + V + + APE M + D++S G ++ E+
Sbjct: 174 TICDFNLA---REDTADANKTHYVTHRW-YRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
Query: 257 GKRISYSSCFEN 268
K + S F N
Sbjct: 230 RKALFRGSTFYN 241
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFG 226
+ +LH S I+ RD+KPS I+ + K DF ++ + G + + + V T
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVV--TRY 190
Query: 227 FIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ APE + E D++S G ++ E++ K
Sbjct: 191 YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 11/101 (10%)
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVA--KFFDFCVSISIPEGKTHVN 216
K A I + LH I+ D+KP IL ++Q + K DF S H
Sbjct: 204 KFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY-----EHQR 255
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ F + APE + A D++S G +L ELLTG
Sbjct: 256 VYTXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 109 HKNILKFVGCC----LETELPI-LVFEFVA--CGTLADRIHDPNGSQLEPF--LMKHRLK 159
H N+++ + C + E+ + LVFE V T D+ P G E LM+ L+
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKA-PPPGLPAETIKDLMRQFLR 123
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNN 219
+ +LH IV RD+KP IL K DF ++ ++ +
Sbjct: 124 -------GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA----RIYSYQMALD 169
Query: 220 KVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
V+ T + APE + + D++S G + E+ K
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 11/101 (10%)
Query: 159 KVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVA--KFFDFCVSISIPEGKTHVN 216
K A I + LH I+ D+KP IL ++Q + K DF S H
Sbjct: 204 KFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY-----EHQR 255
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ F + APE + A D++S G +L ELLTG
Sbjct: 256 VYTXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 68/168 (40%), Gaps = 20/168 (11%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 166
+ H NI++F L ++ E+ + G L +RI + F ++ +
Sbjct: 73 LRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGR-----FSEDEARFFFQQLLS 127
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVA--KFFDFCVSISIPEGKTHVNDNNKVIGT 224
V+Y H S I RD+K L K DF S S H + V GT
Sbjct: 128 GVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKS---SVLHSQPKSTV-GT 180
Query: 225 FGFIAPEYMSTANCNEK-SDVYSFGALLLELLTGKRISYSSCFENGEE 271
+IAPE + + K +DV+S G L +L G + FE+ EE
Sbjct: 181 PAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG-----AYPFEDPEE 223
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Query: 180 VFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMST---- 235
V RDIKP +L + DF + + + T ++ +GT +I+PE +
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT--VQSSVAVGTPDYISPEILQAMEDG 254
Query: 236 -ANCNEKSDVYSFGALLLELLTGKRISYS 263
+ D +S G + E+L G+ Y+
Sbjct: 255 MGKYGPECDWWSLGVCMYEMLYGETPFYA 283
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 179 IVFRDIKPSTILFQEQNVA--KFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMSTA 236
I+ D+KP IL ++Q + K DF S H + F + APE + A
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCY-----EHQRVYXXIQSRF-YRAPEVILGA 274
Query: 237 NCNEKSDVYSFGALLLELLTG 257
D++S G +L ELLTG
Sbjct: 275 RYGMPIDMWSLGCILAELLTG 295
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Query: 180 VFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFGFIAPEYMST---- 235
V RDIKP +L + DF + + + T ++ +GT +I+PE +
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT--VQSSVAVGTPDYISPEILQAMEDG 270
Query: 236 -ANCNEKSDVYSFGALLLELLTGKRISYS 263
+ D +S G + E+L G+ Y+
Sbjct: 271 MGKYGPECDWWSLGVCMYEMLYGETPFYA 299
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 109 HKNILKFVGCC----LETELPI-LVFEFVA--CGTLADRIHDPNGSQLEPF--LMKHRLK 159
H N+++ + C + E+ + LVFE V T D+ P G E LM+ L+
Sbjct: 73 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKA-PPPGLPAETIKDLMRQFLR 131
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNN 219
+ +LH IV RD+KP IL K DF ++ ++
Sbjct: 132 -------GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA----RIYSYQMALT 177
Query: 220 KVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
V+ T + APE + + D++S G + E+ K
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFG 226
+ +LH S I+ RD+KPS I+ + K DF ++ + T V+ +
Sbjct: 143 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRY- 195
Query: 227 FIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ APE + E D++S G ++ E++ K
Sbjct: 196 YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFG 226
+ +LH S I+ RD+KPS I+ + K DF ++ + G + + + T
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFM--MTPYVVTRY 184
Query: 227 FIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
+ APE + E D++S G ++ E++ K
Sbjct: 185 YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFG 226
+ +LH S I+ RD+KPS I+ + K DF ++ + T+ V+ +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---ACTNFMMTPYVVTRY- 190
Query: 227 FIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
+ APE + D++S G ++ EL+ G
Sbjct: 191 YRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 218 NNKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGKRISYSSCFENGEEYFLQEL 277
+ +I T + APE + + SD++SFG +L EL TG + + E+ E + E
Sbjct: 216 HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH--EHMEHLAMMES 273
Query: 278 VRKSIESNSFKE 289
+ + I N E
Sbjct: 274 IIQPIPKNMLYE 285
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 109 HKNILKFVGCC----LETELPI-LVFEFVA--CGTLADRIHDPNGSQLEPF--LMKHRLK 159
H N+++ + C + E+ + LVFE V T D+ P G E LM+ L+
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKA-PPPGLPAETIKDLMRQFLR 123
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNN 219
+ +LH IV RD+KP IL K DF ++ ++
Sbjct: 124 -------GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA----RIYSYQMALA 169
Query: 220 KVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
V+ T + APE + + D++S G + E+ K
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/120 (19%), Positives = 50/120 (41%), Gaps = 16/120 (13%)
Query: 151 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDF-------- 202
P+ + +A ++ AV +LH + D+KP ILF + ++
Sbjct: 133 PYPIHQVRHMAFQLCQAVKFLH---DNKLTHTDLKPENILFVNSDYELTYNLEKKRDERS 189
Query: 203 --CVSISIPEGKTHVNDN---NKVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTG 257
++ + + + D+ + ++ T + APE + ++ DV+S G ++ E G
Sbjct: 190 VKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 109 HKNILKFVGCC----LETELPI-LVFEFVA--CGTLADRIHDPNGSQLEPF--LMKHRLK 159
H N+++ + C + E+ + LVFE V T D+ P G E LM+ L+
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKA-PPPGLPAETIKDLMRQFLR 123
Query: 160 VAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNN 219
+ +LH IV RD+KP IL K DF ++ ++
Sbjct: 124 -------GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA----RIYSYQMALF 169
Query: 220 KVIGTFGFIAPEYMSTANCNEKSDVYSFGALLLELLTGK 258
V+ T + APE + + D++S G + E+ K
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 20/168 (11%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 166
+ H NI++F L +V E+ + G L +RI + F ++ +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-----FSEDEARFFFQQLIS 126
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVA--KFFDFCVSISIPEGKTHVNDNNKVIGT 224
V+Y H + + RD+K L K DF S S + +GT
Sbjct: 127 GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS----SVLHSQPKSTVGT 179
Query: 225 FGFIAPEYMSTANCNEK-SDVYSFGALLLELLTGKRISYSSCFENGEE 271
+IAPE + + K +DV+S G L +L G + FE+ EE
Sbjct: 180 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG-----AYPFEDPEE 222
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 20/168 (11%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 166
+ H NI++F L +V E+ + G L +RI + F ++ +
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-----FSEDEARFFFQQLIS 125
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVA--KFFDFCVSISIPEGKTHVNDNNKVIGT 224
V+Y H + + RD+K L K DF S S + +GT
Sbjct: 126 GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS----SVLHSQPKSTVGT 178
Query: 225 FGFIAPEYMSTANCNEK-SDVYSFGALLLELLTGKRISYSSCFENGEE 271
+IAPE + + K +DV+S G L +L G + FE+ EE
Sbjct: 179 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG-----AYPFEDPEE 221
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 13/106 (12%)
Query: 158 LKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISI--------- 208
LK+ + AV ++H PI+ RD+K +L Q K DF + +I
Sbjct: 139 LKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWS 197
Query: 209 PEGKTHVNDNNKVIGTFGFIAPEYM---STANCNEKSDVYSFGALL 251
+ + V + T + PE + S EK D+++ G +L
Sbjct: 198 AQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|1VSC|A Chain A, Vcam-1
pdb|1VSC|B Chain B, Vcam-1
Length = 196
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 242 SDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSIESNSFKEIVDPII 295
+DVY F L ++LL G + S + FL++ RKS+E+ S + P+I
Sbjct: 116 ADVYPFDRLEIDLLKGDHLMKS-------QEFLEDADRKSLETKSLEVTFTPVI 162
>pdb|1VCA|A Chain A, Crystal Structure Of An Integrin-Binding Fragment Of
Vascular Cell Adhesion Molecule-1 At 1.8 Angstroms
Resolution
pdb|1VCA|B Chain B, Crystal Structure Of An Integrin-Binding Fragment Of
Vascular Cell Adhesion Molecule-1 At 1.8 Angstroms
Resolution
Length = 202
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 242 SDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSIESNSFKEIVDPII 295
+DVY F L ++LL G + S + FL++ RKS+E+ S + P+I
Sbjct: 116 ADVYPFDRLEIDLLKGDHLMKS-------QEFLEDADRKSLETKSLEVTFTPVI 162
>pdb|1IJ9|A Chain A, Highly Hydrated Human Vcam-1 Fragment
Length = 196
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 242 SDVYSFGALLLELLTGKRISYSSCFENGEEYFLQELVRKSIESNSFKEIVDPII 295
+DVY F L ++LL G + S + FL++ RKS+E+ S + P+I
Sbjct: 116 ADVYPFDRLEIDLLKGDHLMKS-------QEFLEDADRKSLETKSLEVTFTPVI 162
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 16/166 (9%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 166
+ H NI++F L +V E+ + G L +RI + F ++ +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-----FSEDEARFFFQQLIS 126
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFG 226
V+Y H + + RD+K L + + A C H + V GT
Sbjct: 127 GVSYCH---AMQVCHRDLKLENTLL-DGSPAPRLKICAFGYSKSSVLHSQPKDTV-GTPA 181
Query: 227 FIAPEYMSTANCNEK-SDVYSFGALLLELLTGKRISYSSCFENGEE 271
+IAPE + + K +DV+S G L +L G + FE+ EE
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG-----AYPFEDPEE 222
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 68/166 (40%), Gaps = 16/166 (9%)
Query: 107 MSHKNILKFVGCCLETELPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 166
+ H NI++F L +V E+ + G L +RI + F ++ +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-----FSEDEARFFFQQLIS 126
Query: 167 AVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVNDNNKVIGTFG 226
V+Y H + + RD+K L + + A C + + + +GT
Sbjct: 127 GVSYCH---AMQVCHRDLKLENTLL-DGSPAPRLKIC-AFGYSKSSVLHSQPKSTVGTPA 181
Query: 227 FIAPEYMSTANCNEK-SDVYSFGALLLELLTGKRISYSSCFENGEE 271
+IAPE + + K +DV+S G L +L G + FE+ EE
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG-----AYPFEDPEE 222
>pdb|3SPA|A Chain A, Crystal Structure Of Human Mitochondrial Rna Polymerase
Length = 1134
Score = 30.4 bits (67), Expect = 1.4, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
Query: 286 SFKEIVDPI-IVGEEGLWPEKEKQLLSYTELAIKCLSKSEQDRPTMVQVAKQLRQ 339
+FKE+V + +V + GL P+ LLSY A++C+ + +QD T+ + +Q+ Q
Sbjct: 180 AFKELVYVLFMVKDAGLTPD----LLSYAA-ALQCMGRQDQDAGTIERCLEQMSQ 229
>pdb|3GJY|A Chain A, Crystal Structure Of A Probable Spermidine Synthase From
Corynebacterium Glutamicum Atcc 13032
Length = 317
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 21/88 (23%)
Query: 157 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPSTILFQEQNVAKFFDFCVSISIPEGKTHVN 216
R+K+ ++ A VA SR ++ RD+ I Q +FF+ C H
Sbjct: 140 RVKIRVDDARXVAESFTPASRDVIIRDVFAGAITPQNFTTVEFFEHC----------HRG 189
Query: 217 DNNKVIGTFGFIAPEYMSTANCNEKSDV 244
+AP + ANC + SD+
Sbjct: 190 -----------LAPGGLYVANCGDHSDL 206
>pdb|2PSN|A Chain A, Crystal Structure Of Enolase1
pdb|2PSN|B Chain B, Crystal Structure Of Enolase1
pdb|2PSN|C Chain C, Crystal Structure Of Enolase1
pdb|2PSN|D Chain D, Crystal Structure Of Enolase1
Length = 434
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 58 DPEKVITKDLLYKLYKGFLQDRPI 81
DP + I+ D L LYK F++D P+
Sbjct: 266 DPSRYISPDQLADLYKSFIKDYPV 289
>pdb|3B97|A Chain A, Crystal Structure Of Human Enolase 1
pdb|3B97|B Chain B, Crystal Structure Of Human Enolase 1
pdb|3B97|C Chain C, Crystal Structure Of Human Enolase 1
pdb|3B97|D Chain D, Crystal Structure Of Human Enolase 1
Length = 433
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 58 DPEKVITKDLLYKLYKGFLQDRPI 81
DP + I+ D L LYK F++D P+
Sbjct: 265 DPSRYISPDQLADLYKSFIKDYPV 288
>pdb|2CFB|A Chain A, Glutamate-1-Semialdehyde 2,1-Aminomutase From
Thermosynechococcus Elongatus
Length = 411
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 221 VIGTFGFIAPEYMSTANCNEKSDVYSFGALLL--ELLTGKRISYSSCFE 267
V+G GFI P+ E + Y GALL+ E++TG RI+Y E
Sbjct: 192 VVGNAGFIPPDAGFLEGLRELTKQY--GALLVFDEVMTGFRIAYGGAQE 238
>pdb|3JWS|A Chain A, Structure Of Neuronal Nitric Oxide Synthase R349a Mutant
Hem Complexed With N1-[(3'
S,4's)-4'-((6"-Amino-4"-Methylpyridi
Methyl)pyrrolidin-3'-Yl]-N2-(3'-Fluorophenethyl)ethane-
1,2- Tetrahydrochloride
pdb|3JWS|B Chain B, Structure Of Neuronal Nitric Oxide Synthase R349a Mutant
Hem Complexed With N1-[(3'
S,4's)-4'-((6"-Amino-4"-Methylpyridi
Methyl)pyrrolidin-3'-Yl]-N2-(3'-Fluorophenethyl)ethane-
1,2- Tetrahydrochloride
pdb|3JWT|A Chain A, Structure Of Rat Neuronal Nitric Oxide Synthase R349a
Mutant Heme Domain In Complex With
N1-{(3'r,4'r)-4'-[(6"-Amino-4"-Methylpyridin-
2"-Yl)methyl]pyrrolidin-3'-Yl}-N2-(3'-
Fluorophenethyl)ethane-1,2- Diamine
pdb|3JWT|B Chain B, Structure Of Rat Neuronal Nitric Oxide Synthase R349a
Mutant Heme Domain In Complex With
N1-{(3'r,4'r)-4'-[(6"-Amino-4"-Methylpyridin-
2"-Yl)methyl]pyrrolidin-3'-Yl}-N2-(3'-
Fluorophenethyl)ethane-1,2- Diamine
pdb|3JWU|A Chain A, Structure Of Rat Neuronal Nitric Oxide Synthase R349a
Mutant Domain In Complex With
N1-{(3'r,4's)-4'-[(6"-Amino-4"-Methy
2"-Yl)methyl]pyrrolidin-3'-Yl}-N2-(3'-
Fluorophenethyl)ethan Diamine Tetrahydrochloride
pdb|3JWU|B Chain B, Structure Of Rat Neuronal Nitric Oxide Synthase R349a
Mutant Domain In Complex With
N1-{(3'r,4's)-4'-[(6"-Amino-4"-Methy
2"-Yl)methyl]pyrrolidin-3'-Yl}-N2-(3'-
Fluorophenethyl)ethan Diamine Tetrahydrochloride
pdb|3JWV|A Chain A, Structure Of Rat Neuronal Nitric Oxide Synthase R349a
Mutant Domain In Complex With
N1-{(3's,4'r)-4'-[(6"-Amino-4"-Methy
2"-Yl)methyl]pyrrolidin-3'-Yl}-N2-(3'-
Fluorophenethyl)ethan Diamine
pdb|3JWV|B Chain B, Structure Of Rat Neuronal Nitric Oxide Synthase R349a
Mutant Domain In Complex With
N1-{(3's,4'r)-4'-[(6"-Amino-4"-Methy
2"-Yl)methyl]pyrrolidin-3'-Yl}-N2-(3'-
Fluorophenethyl)ethan Diamine
pdb|3NLK|A Chain A, Structure Of Neuronal Nitric Oxide Synthase R349a Mutant
Heme Domain In Complex With
6-{{(3's,4's)-3'-[2"-(3'''-Fluorophenethylamino)
Ethoxy]pyrrolidin-4'-Yl}methyl}-4-Methylpyridin-2-Amine
pdb|3NLK|B Chain B, Structure Of Neuronal Nitric Oxide Synthase R349a Mutant
Heme Domain In Complex With
6-{{(3's,4's)-3'-[2"-(3'''-Fluorophenethylamino)
Ethoxy]pyrrolidin-4'-Yl}methyl}-4-Methylpyridin-2-Amine
pdb|3NLN|A Chain A, Structure Of Neuronal Nitric Oxide Synthase R349a Mutant
Heme Domain In Complex With
6-{{(3'r,4's)-3'-[2"-(3'''-Fluorophenethylamino)
Ethoxy]pyrrolidin-4'-Yl}methyl}-4-Methylpyridin-2-Amine
pdb|3NLN|B Chain B, Structure Of Neuronal Nitric Oxide Synthase R349a Mutant
Heme Domain In Complex With
6-{{(3'r,4's)-3'-[2"-(3'''-Fluorophenethylamino)
Ethoxy]pyrrolidin-4'-Yl}methyl}-4-Methylpyridin-2-Amine
pdb|3NLO|A Chain A, Structure Of Neuronal Nitric Oxide Synthase R349a Mutant
Heme Domain In Complex With
6-{{(3's,4'r)-3'-[2"-(3'''-Fluorophenethylamino)
Ethoxy]pyrrolidin-4'-Yl}methyl}-4-Methylpyridin-2-Amine
pdb|3NLO|B Chain B, Structure Of Neuronal Nitric Oxide Synthase R349a Mutant
Heme Domain In Complex With
6-{{(3's,4'r)-3'-[2"-(3'''-Fluorophenethylamino)
Ethoxy]pyrrolidin-4'-Yl}methyl}-4-Methylpyridin-2-Amine
Length = 422
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 59 PEKVITKDLLYKLYKGFLQDRPISVMKFG 87
PE V TKD L+ L K FL S+ +FG
Sbjct: 49 PEDVATKDQLFPLAKEFLDQYYSSIKRFG 77
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,853,661
Number of Sequences: 62578
Number of extensions: 411986
Number of successful extensions: 2702
Number of sequences better than 100.0: 984
Number of HSP's better than 100.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 590
Number of HSP's that attempted gapping in prelim test: 1513
Number of HSP's gapped (non-prelim): 1049
length of query: 344
length of database: 14,973,337
effective HSP length: 100
effective length of query: 244
effective length of database: 8,715,537
effective search space: 2126591028
effective search space used: 2126591028
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)