Query         048162
Match_columns 152
No_of_seqs    102 out of 1057
Neff          7.3 
Searched_HMMs 46136
Date          Fri Mar 29 06:53:58 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048162.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048162hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PLN03157 spermidine hydroxycin 100.0 1.5E-31 3.2E-36  227.6  13.5  137    9-152     1-137 (447)
  2 PF02458 Transferase:  Transfer 100.0 3.1E-30 6.7E-35  216.8   7.9  138    9-152     1-138 (432)
  3 PLN02663 hydroxycinnamoyl-CoA: 100.0 5.9E-29 1.3E-33  210.5  12.9  136    9-152     1-136 (431)
  4 PLN02481 Omega-hydroxypalmitat 100.0 2.3E-28 4.9E-33  207.6  13.4  138    8-152    11-149 (436)
  5 PLN00140 alcohol acetyltransfe  99.9 2.6E-27 5.7E-32  201.6  11.0  135    9-152     1-139 (444)
  6 PF03007 WES_acyltransf:  Wax e  45.9      75  0.0016   25.2   6.0   46   44-91     18-63  (263)
  7 COG0771 MurD UDP-N-acetylmuram  38.4      42  0.0009   29.3   3.7   20   70-89    295-314 (448)
  8 PRK09294 acyltransferase PapA5  35.1 1.4E+02   0.003   25.0   6.3   36   64-99     34-69  (416)
  9 COG3526 Uncharacterized protei  25.3 1.8E+02  0.0038   19.7   4.1   37   76-114    29-67  (99)
 10 PF02934 GatB_N:  GatB/GatE cat  24.5 1.3E+02  0.0028   24.8   4.1   23   94-116   137-159 (289)
 11 PF11164 DUF2948:  Protein of u  22.5 1.3E+02  0.0028   22.1   3.4   30   91-120    98-128 (138)
 12 PF11631 DUF3255:  Protein of u  21.1      82  0.0018   21.9   2.0   28   75-102    77-104 (123)

No 1  
>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional
Probab=99.97  E-value=1.5e-31  Score=227.61  Aligned_cols=137  Identities=36%  Similarity=0.604  Sum_probs=116.7

Q ss_pred             eEEEEecceEEeCCCCCCCccccCCCchhhcccccccccEEEEEecCCCCCCCCCCcHHHHHHHHHHhhhhhcCCceeee
Q 048162            9 FSVKRRAPELIGPALAPKSHEVKQLSDIDDQQGLWFQVPLIFFYKNNPSPSMKGKDPVKVIKEALSRALVYYYPFAGRLR   88 (152)
Q Consensus         9 ~~V~i~~~~~V~P~~~~t~~~~~~LS~lD~~~~~~~~~~~v~fy~~~~~~~~~~~~~v~~Lk~sLs~~L~~f~plAGRl~   88 (152)
                      |.|++.++++|+|+ .|||++.++||+||+. ...+|++.||||+++..  ......+++||+|||+||++||||||||+
T Consensus         1 ~~v~~~~~~~v~Ps-~ptp~~~~~LS~lD~~-~~~~~v~~v~fy~~~~~--~~~~~~~~~Lk~sLs~~L~~fyplAGRl~   76 (447)
T PLN03157          1 MVVILKASYTVKPA-KPTWTGRRSLSEWDQV-GTITHVPTIYFYSPPWN--TSSGSIIEILKDSLSRALVPFYPLAGRLR   76 (447)
T ss_pred             CeEEEeccEEECCC-CCCCCCccCCChhhhc-cccccCCEEEEEeCCCc--cccccHHHHHHHHHHHHHhhccccCEEEE
Confidence            56999999999999 9999999999999975 46789999999986431  12235689999999999999999999999


Q ss_pred             ecCCCcEEEEecCCCeEEEEEEecCCccccCCCCCCCCcccccccCCcCCCCCCCCCCCeEeeC
Q 048162           89 EGSNGKLMVDCNGEGVLFTEADADFSLDQLGDDEIKPPCPYLDELLYDVPGSEGILGCPLLLIR  152 (152)
Q Consensus        89 ~~~~g~~~i~cn~~Gv~fveA~~~~~l~~l~~~~~~~~~~~~~~lv~~~~~~~~~~~~PLl~vQ  152 (152)
                      ++++|+++|+|||+||+|+||+++++|+|+++  .. +.+.+++|+|..+..+.....|+|+||
T Consensus        77 ~~~~g~~~i~c~~~Gv~fveA~~~~~l~~~~~--~~-~~~~~~~l~P~~~~~~~~~~~Pll~vQ  137 (447)
T PLN03157         77 WIGGGRLELECNAMGVLLIEAESEAKLDDFGD--FS-PTPEFEYLIPSVDYTKPIHELPLLLVQ  137 (447)
T ss_pred             EcCCCcEEEEECCCCeEEEEEEeCCcHHHhhc--cC-CCHHHHhhcCCCCcccccccCceEEEE
Confidence            99999999999999999999999999999976  43 556678899876544444568999998


No 2  
>PF02458 Transferase:  Transferase family;  InterPro: IPR003480 This family includes a number of transferase enzymes. These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis []. Deacetylvindoline 4-O-acetyltransferase (2.3.1.107 from EC) catalyzes the last step in vindoline biosynthesis is also a member of this family []. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 2BGH_B 2E1U_B 2E1T_A 2E1V_A 2XR7_A 3B30_A 2RKT_A 3B2S_A 2RKV_A 2ZBA_C ....
Probab=99.96  E-value=3.1e-30  Score=216.76  Aligned_cols=138  Identities=38%  Similarity=0.652  Sum_probs=106.7

Q ss_pred             eEEEEecceEEeCCCCCCCccccCCCchhhcccccccccEEEEEecCCCCCCCCCCcHHHHHHHHHHhhhhhcCCceeee
Q 048162            9 FSVKRRAPELIGPALAPKSHEVKQLSDIDDQQGLWFQVPLIFFYKNNPSPSMKGKDPVKVIKEALSRALVYYYPFAGRLR   88 (152)
Q Consensus         9 ~~V~i~~~~~V~P~~~~t~~~~~~LS~lD~~~~~~~~~~~v~fy~~~~~~~~~~~~~v~~Lk~sLs~~L~~f~plAGRl~   88 (152)
                      |+|+|.++++|+|+ .+||++.++||++|.++...+|++.+|||+.+.  .......++.||+|||++|++|||||||| 
T Consensus         1 m~v~v~~~~~V~Ps-~~tp~~~~~LS~lD~~~~~~~~~~~~~~y~~~~--~~~~~~~~~~Lk~sLs~~L~~~~~lAGrl-   76 (432)
T PF02458_consen    1 MKVTVLSRSLVKPS-SPTPPHTLPLSNLDLQLMPPYYVPVLLFYRPPS--SSDDSDIVDNLKESLSKTLVHYYPLAGRL-   76 (432)
T ss_dssp             ---EEEEECEEE-S-TTS-TCEEE--HHHHHCCGCSEEEEEEEEE--S--SCHHHHHHHHHHHHHHHHHTTSGGGGSEE-
T ss_pred             CCCEEecCEEEECC-CCCCCCcccCchhhcCcccccEEEEEEEecCcc--ccccchHHHHHHHHHHHhHhhCcccCcEE-
Confidence            68999999999999 999989999999996667788999999999754  21122358999999999999999999999 


Q ss_pred             ecCCCcEEEEecCCCeEEEEEEecCCccccCCCCCCCCcccccccCCcCCCCCCCCCCCeEeeC
Q 048162           89 EGSNGKLMVDCNGEGVLFTEADADFSLDQLGDDEIKPPCPYLDELLYDVPGSEGILGCPLLLIR  152 (152)
Q Consensus        89 ~~~~g~~~i~cn~~Gv~fveA~~~~~l~~l~~~~~~~~~~~~~~lv~~~~~~~~~~~~PLl~vQ  152 (152)
                      ++++|+++|+|||+||+|+||+++.+++++..  ..++......|+|..+...+....|++.||
T Consensus        77 ~~~~~~~~i~c~d~Gv~f~~a~~~~~l~~~~~--~~~~~~~~~~l~p~~~~~~~~~~~Pll~vQ  138 (432)
T PF02458_consen   77 RDPDGRLEIDCNDDGVEFVEAEADGTLDDLLD--LEPPSEFLRDLVPQLPVSSEGEDAPLLAVQ  138 (432)
T ss_dssp             ESSCTTTEEEECTTTEEEEEEEESS-HHHHCS--SSCCGGGGGGGSSS-SSSEEETTEBSEEEE
T ss_pred             cccccceEEEEecCCCEEEEEecccceeeccc--cccchHHHHHHhhhcccCCcccccceeEee
Confidence            77799999999999999999999999999987  344555667888866544444468999998


No 3  
>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase
Probab=99.96  E-value=5.9e-29  Score=210.54  Aligned_cols=136  Identities=37%  Similarity=0.605  Sum_probs=114.2

Q ss_pred             eEEEEecceEEeCCCCCCCccccCCCchhhcccccccccEEEEEecCCCCCCCCCCcHHHHHHHHHHhhhhhcCCceeee
Q 048162            9 FSVKRRAPELIGPALAPKSHEVKQLSDIDDQQGLWFQVPLIFFYKNNPSPSMKGKDPVKVIKEALSRALVYYYPFAGRLR   88 (152)
Q Consensus         9 ~~V~i~~~~~V~P~~~~t~~~~~~LS~lD~~~~~~~~~~~v~fy~~~~~~~~~~~~~v~~Lk~sLs~~L~~f~plAGRl~   88 (152)
                      |+|+++++++|+|+ .+||++.++||+||+. ....|++.||||+.+..  . .....++||+|||++|++||||||||+
T Consensus         1 ~~v~~~~~~~V~Ps-~ptp~~~~~LS~lD~~-~~~~~~~~v~fY~~~~~--~-~~~~~~~Lk~sLs~~L~~~yplaGRl~   75 (431)
T PLN02663          1 MIINVRESTMVRPA-EETPRRGLWNSNVDLV-VPRFHTPSVYFYRPTGA--S-NFFDPQVMKEALSKALVPFYPMAGRLR   75 (431)
T ss_pred             CeEEEcCcEEECCC-CCCCCCcccCChhhcc-cccccccEEEEEcCCCC--C-CccCHHHHHHHHHHHHhhccccceeee
Confidence            57999999999999 9999999999999975 56899999999996431  1 122368999999999999999999999


Q ss_pred             ecCCCcEEEEecCCCeEEEEEEecCCccccCCCCCCCCcccccccCCcCCCCCCCCCCCeEeeC
Q 048162           89 EGSNGKLMVDCNGEGVLFTEADADFSLDQLGDDEIKPPCPYLDELLYDVPGSEGILGCPLLLIR  152 (152)
Q Consensus        89 ~~~~g~~~i~cn~~Gv~fveA~~~~~l~~l~~~~~~~~~~~~~~lv~~~~~~~~~~~~PLl~vQ  152 (152)
                      .+++|+++|+||++||.|+||+++++++++.+  +. +...+++|+|..+...+..+.|+|.+|
T Consensus        76 ~~~~g~~~i~c~~~Gv~fv~A~~~~~l~~~~~--~~-~~~~~~~l~P~~~~~~~~~~~P~l~vQ  136 (431)
T PLN02663         76 RDEDGRIEIDCNAEGVLFVEADTPSVIDDFGD--FA-PTLELRQLIPTVDYSGGISSYPLLVLQ  136 (431)
T ss_pred             ECCCCCEEEEECCCCceEEEEecCCCHHHhhc--cC-CCHHHHhhcCCCCCccccccCceEEEE
Confidence            99899999999999999999999999999976  43 345567788865433334568999998


No 4  
>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase
Probab=99.96  E-value=2.3e-28  Score=207.59  Aligned_cols=138  Identities=45%  Similarity=0.774  Sum_probs=115.7

Q ss_pred             eeEEEEecceEEeCCCCCCCccccCCCchhhcccccccccEEEEEecCCCCCCCCCCcHHHHHHHHHHhhhhhcCCceee
Q 048162            8 EFSVKRRAPELIGPALAPKSHEVKQLSDIDDQQGLWFQVPLIFFYKNNPSPSMKGKDPVKVIKEALSRALVYYYPFAGRL   87 (152)
Q Consensus         8 ~~~V~i~~~~~V~P~~~~t~~~~~~LS~lD~~~~~~~~~~~v~fy~~~~~~~~~~~~~v~~Lk~sLs~~L~~f~plAGRl   87 (152)
                      .++|++.++++|+|+ .|||++.++||++|+.+  ..|++.+|||+.++.  .+....+++||+||+++|++||||||||
T Consensus        11 ~~~v~~~~~~~V~Ps-~ptp~~~~~LS~lD~~~--~~~~~~~~fy~~~~~--~~~~~~~~~Lk~sLs~~L~~~~plAGRL   85 (436)
T PLN02481         11 QLVVKQKEPELVPPA-EETPKGLYFLSNLDQNI--AVIVRTVYCFKSEER--GSNEDPVDVIKKALSKVLVHYYPLAGRL   85 (436)
T ss_pred             ceEEEEcCCEEeCCC-CCCCCCceecCccccCc--ceeeeEEEEECCCCc--ccccCHHHHHHHHHHHHhccccCCCCee
Confidence            367999999999999 99999999999999753  468999999997542  2234678999999999999999999999


Q ss_pred             eecCCCcEEEEecCCCeEEEEEEecCCccccCCCCC-CCCcccccccCCcCCCCCCCCCCCeEeeC
Q 048162           88 REGSNGKLMVDCNGEGVLFTEADADFSLDQLGDDEI-KPPCPYLDELLYDVPGSEGILGCPLLLIR  152 (152)
Q Consensus        88 ~~~~~g~~~i~cn~~Gv~fveA~~~~~l~~l~~~~~-~~~~~~~~~lv~~~~~~~~~~~~PLl~vQ  152 (152)
                      +.+++|+++|+|||+||.|+||+++.+++++.+  . .++.+.+++|+|..+........|+|++|
T Consensus        86 ~~~~~g~~~i~c~~~Gv~fvea~~d~~l~~l~~--~~~p~~~~~~~l~~~~~~~~~~~~~Pll~vQ  149 (436)
T PLN02481         86 TISSEGKLIVDCTGEGVVFVEAEANCSIEEIGD--ITKPDPETLGKLVYDVPGAKNILEIPPLTAQ  149 (436)
T ss_pred             eeCCCCcEEEEEcCCCeEEEEEEecCcHHHhcc--ccCCCCHHHHHhCCCCCCcccccccceeeec
Confidence            999999999999999999999999999999966  3 23344677888766543334468999998


No 5  
>PLN00140 alcohol acetyltransferase family protein; Provisional
Probab=99.94  E-value=2.6e-27  Score=201.62  Aligned_cols=135  Identities=32%  Similarity=0.476  Sum_probs=107.4

Q ss_pred             eEEEEecceEEeCCCCCCCcc--ccCCCchhhcccccccccEEEEEecCCCCCCCCCCcHHHHHHHHHHhhhhhcCCcee
Q 048162            9 FSVKRRAPELIGPALAPKSHE--VKQLSDIDDQQGLWFQVPLIFFYKNNPSPSMKGKDPVKVIKEALSRALVYYYPFAGR   86 (152)
Q Consensus         9 ~~V~i~~~~~V~P~~~~t~~~--~~~LS~lD~~~~~~~~~~~v~fy~~~~~~~~~~~~~v~~Lk~sLs~~L~~f~plAGR   86 (152)
                      |+|+++++++|+|+ .+||.+  .++||+||+. ...+|++.+|||+.+..++......+++||+|||++|++|||||||
T Consensus         1 ~~v~~~s~~~V~Ps-~ptp~~~~~~~LS~lD~~-~~~~~~~~~~fY~~~~~~~~~~~~~~~~Lk~sLs~~L~~fyplAGR   78 (444)
T PLN00140          1 MEVSIISRELIKPS-SPSIHHLKPFKLSLLDQL-TPTTYIPMIFFYPTNNNQNFKGLQISIQLKRSLSETLSTFYPFSGR   78 (444)
T ss_pred             CeeEEeccceeccC-CCCccccccCCCChHHhc-ccccccceEEEeeCCCcccccchhHHHHHHHHHHHHHhhhhccCcc
Confidence            57999999999999 999874  6789999965 5678999999999744211112357899999999999999999999


Q ss_pred             eeecCCCcEEEEecCCCeEEEEEEecCCccccCCCCCCCCcccccccCCcCCCC--CCCCCCCeEeeC
Q 048162           87 LREGSNGKLMVDCNGEGVLFTEADADFSLDQLGDDEIKPPCPYLDELLYDVPGS--EGILGCPLLLIR  152 (152)
Q Consensus        87 l~~~~~g~~~i~cn~~Gv~fveA~~~~~l~~l~~~~~~~~~~~~~~lv~~~~~~--~~~~~~PLl~vQ  152 (152)
                      |+.    +++|+|||+||.|+||+++++++|+..   .+....+++|+|..+..  ....+.|+|+||
T Consensus        79 l~~----~~~i~cn~~Gv~fveA~~~~~l~d~l~---~~~~~~~~~l~p~~~~~~~~~~~~~Pll~vQ  139 (444)
T PLN00140         79 VKD----NLIIDNYEEGVPFFETRVKGSLSDFLK---HPQLELLNKFLPCQPFSYESDPEAIPQVAIQ  139 (444)
T ss_pred             ccC----CceeEccCCCceEEEEEecCcHHHhcC---CCCHHHHHhhCCCCcccccCCccCCceEEEE
Confidence            985    589999999999999999999999965   23333567888754421  122357999998


No 6  
>PF03007 WES_acyltransf:  Wax ester synthase-like Acyl-CoA acyltransferase domain;  InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins. O-acyltransferase WSD1 is a bifunctional wax ester synthase/diacylglycerol acyltransferase, which is involved in cuticular wax biosynthesis [].; GO: 0004144 diacylglycerol O-acyltransferase activity
Probab=45.93  E-value=75  Score=25.16  Aligned_cols=46  Identities=13%  Similarity=0.093  Sum_probs=34.7

Q ss_pred             ccccEEEEEecCCCCCCCCCCcHHHHHHHHHHhhhhhcCCceeeeecC
Q 048162           44 FQVPLIFFYKNNPSPSMKGKDPVKVIKEALSRALVYYYPFAGRLREGS   91 (152)
Q Consensus        44 ~~~~~v~fy~~~~~~~~~~~~~v~~Lk~sLs~~L~~f~plAGRl~~~~   91 (152)
                      .++..+++|+.+..  ......++.|++.+.+.+..++.|.-|++..+
T Consensus        18 mhv~~~~~~~~~~~--~~~~~~~~~l~~~~~~r~~~~p~fr~rv~~~~   63 (263)
T PF03007_consen   18 MHVGALAIFDPPTD--GAPPLDVERLRARLEARLARHPRFRQRVVRVP   63 (263)
T ss_pred             ceEEEEEEEEcCCC--CCCcchHHHHHHHHHHhhccCCccccceecCC
Confidence            47778899987531  11122588999999999999999999887754


No 7  
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]
Probab=38.43  E-value=42  Score=29.33  Aligned_cols=20  Identities=30%  Similarity=0.296  Sum_probs=16.7

Q ss_pred             HHHHHHhhhhhcCCceeeee
Q 048162           70 KEALSRALVYYYPFAGRLRE   89 (152)
Q Consensus        70 k~sLs~~L~~f~plAGRl~~   89 (152)
                      .+++.++|..|.++.+|++.
T Consensus       295 ~e~i~~~L~~F~gl~HR~e~  314 (448)
T COG0771         295 PEAILEALSSFTGLPHRLEF  314 (448)
T ss_pred             HHHHHHHHHhCCCCCcceEE
Confidence            35689999999999988864


No 8  
>PRK09294 acyltransferase PapA5; Provisional
Probab=35.14  E-value=1.4e+02  Score=24.98  Aligned_cols=36  Identities=17%  Similarity=0.175  Sum_probs=29.3

Q ss_pred             CcHHHHHHHHHHhhhhhcCCceeeeecCCCcEEEEe
Q 048162           64 DPVKVIKEALSRALVYYYPFAGRLREGSNGKLMVDC   99 (152)
Q Consensus        64 ~~v~~Lk~sLs~~L~~f~plAGRl~~~~~g~~~i~c   99 (152)
                      ...+.|++||.+++..|+-|..|+..+++|.+.+..
T Consensus        34 lD~~~L~~Al~~l~~rhp~Lr~~~~~~~~~~~~~~~   69 (416)
T PRK09294         34 LDIDALSDAFDALLRAHPVLAAHLEQDSDGGWELVA   69 (416)
T ss_pred             CCHHHHHHHHHHHHHhCHHhhEEEEECCCCceEEee
Confidence            347899999999999999999999766666655444


No 9  
>COG3526 Uncharacterized protein conserved in bacteria [Posttranslational modification, protein turnover, chaperones]
Probab=25.25  E-value=1.8e+02  Score=19.71  Aligned_cols=37  Identities=24%  Similarity=0.309  Sum_probs=23.8

Q ss_pred             hhhhhcCCceeeeecC--CCcEEEEecCCCeEEEEEEecCC
Q 048162           76 ALVYYYPFAGRLREGS--NGKLMVDCNGEGVLFTEADADFS  114 (152)
Q Consensus        76 ~L~~f~plAGRl~~~~--~g~~~i~cn~~Gv~fveA~~~~~  114 (152)
                      .|..|-.=-|.+...+  .|.++|.||  ||...|-+.|.-
T Consensus        29 lL~TF~~dlgeV~L~PgTGG~FeI~~d--g~~iWeRKrdGG   67 (99)
T COG3526          29 LLSTFADDLGEVALIPGTGGVFEITCD--GVLIWERKRDGG   67 (99)
T ss_pred             HHHHHHhhhheEEEecCCCceEEEEEC--CEEEEEeeccCC
Confidence            3444544445555443  678999997  688888776643


No 10 
>PF02934 GatB_N:  GatB/GatE catalytic domain;  InterPro: IPR006075 Glutamyl-tRNA(Gln) amidotransferase subunit B (6.3.5 from EC) [] is a microbial enzyme that furnishes a means for formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The enzyme is composed of three subunits: A (an amidase), B and C. It also exists in eukaryotes as a protein targeted to the mitochondria. ; GO: 0016874 ligase activity; PDB: 3H0M_H 3H0R_K 3H0L_K 3AL0_B 3IP4_B 2DF4_B 2G5I_B 2F2A_B 2G5H_B 2DQN_B ....
Probab=24.53  E-value=1.3e+02  Score=24.80  Aligned_cols=23  Identities=26%  Similarity=0.299  Sum_probs=15.9

Q ss_pred             cEEEEecCCCeEEEEEEecCCcc
Q 048162           94 KLMVDCNGEGVLFTEADADFSLD  116 (152)
Q Consensus        94 ~~~i~cn~~Gv~fveA~~~~~l~  116 (152)
                      .-.|+.|-.|++++|-.++-++.
T Consensus       137 ~s~vD~NRaG~PLiEIVTePd~~  159 (289)
T PF02934_consen  137 YSLVDYNRAGVPLIEIVTEPDIR  159 (289)
T ss_dssp             EEEEETTSTT-EEEEEEE-TTB-
T ss_pred             eeEEcccCCCccceEEeeCCCCC
Confidence            45678899999999988765554


No 11 
>PF11164 DUF2948:  Protein of unknown function (DUF2948);  InterPro: IPR021335  This family of proteins with unknown function appear to be restricted to Proteobacteria. 
Probab=22.52  E-value=1.3e+02  Score=22.08  Aligned_cols=30  Identities=23%  Similarity=0.536  Sum_probs=25.4

Q ss_pred             CCCcEEEEecCCCeEEEEEEe-cCCccccCC
Q 048162           91 SNGKLMVDCNGEGVLFTEADA-DFSLDQLGD  120 (152)
Q Consensus        91 ~~g~~~i~cn~~Gv~fveA~~-~~~l~~l~~  120 (152)
                      ++|.+.+.+.+.|+.=.+.+| ++.|.|++.
T Consensus        98 p~G~v~L~fAGgg~IrL~VE~ie~~L~D~~~  128 (138)
T PF11164_consen   98 PAGHVLLTFAGGGAIRLEVECIEVQLRDLGR  128 (138)
T ss_pred             CCcEEEEEECCCcEEEEEEEEEEEEEeecCC
Confidence            478899999999988888877 789999976


No 12 
>PF11631 DUF3255:  Protein of unknown function (DUF3255);  InterPro: IPR021664  Members in this family of proteins are annotated as YxeF however no function is currently known. The family appears to be restricted to Bacillus. ; PDB: 2JOZ_A.
Probab=21.06  E-value=82  Score=21.92  Aligned_cols=28  Identities=39%  Similarity=0.745  Sum_probs=19.1

Q ss_pred             HhhhhhcCCceeeeecCCCcEEEEecCC
Q 048162           75 RALVYYYPFAGRLREGSNGKLMVDCNGE  102 (152)
Q Consensus        75 ~~L~~f~plAGRl~~~~~g~~~i~cn~~  102 (152)
                      +-|-+|||+--.|.+.++|.+...-|++
T Consensus        77 qylg~~~plkstlkrgen~tliw~~~g~  104 (123)
T PF11631_consen   77 QYLGPYYPLKSTLKRGENGTLIWEQNGQ  104 (123)
T ss_dssp             EEESTT-S-EEEEEE-STT-EEEEETTE
T ss_pred             EEcCCCcchhhHhhcCCCCcEEEEecCc
Confidence            4578999999999999988887766654


Done!