Query 048162
Match_columns 152
No_of_seqs 102 out of 1057
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 11:46:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048162.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048162hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 2.7E-31 9.2E-36 223.7 15.5 137 8-152 5-141 (439)
2 2e1v_A Acyl transferase; BAHD 99.9 6.8E-27 2.3E-31 197.2 9.3 144 5-152 1-153 (454)
3 2bgh_A Vinorine synthase; VS, 99.9 2.9E-26 1E-30 192.0 11.1 136 9-152 3-143 (421)
4 2xr7_A Malonyltransferase; xen 99.9 1.7E-26 5.7E-31 194.6 8.5 138 11-152 2-148 (453)
5 2rkv_A Trichothecene 3-O-acety 99.7 1.5E-17 5E-22 139.7 6.8 118 31-152 5-140 (451)
6 1apy_B Aspartylglucosaminidase 32.6 1.3E+02 0.0043 21.1 6.3 47 64-110 76-127 (141)
7 1q9j_A PAPA5, polyketide synth 23.1 1.6E+02 0.0054 22.7 5.7 61 29-96 6-66 (422)
8 1k2x_B Putative L-asparaginase 21.2 1.6E+02 0.0054 20.6 4.7 49 64-112 77-125 (143)
9 3u5c_Q RP61R, 40S ribosomal pr 19.6 45 0.0015 23.5 1.6 19 64-82 76-94 (143)
10 3h0l_B Aspartyl/glutamyl-tRNA( 19.4 1.2E+02 0.0041 25.5 4.4 21 96-116 141-161 (478)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=99.97 E-value=2.7e-31 Score=223.66 Aligned_cols=137 Identities=36% Similarity=0.603 Sum_probs=118.6
Q ss_pred eeEEEEecceEEeCCCCCCCccccCCCchhhcccccccccEEEEEecCCCCCCCCCCcHHHHHHHHHHhhhhhcCCceee
Q 048162 8 EFSVKRRAPELIGPALAPKSHEVKQLSDIDDQQGLWFQVPLIFFYKNNPSPSMKGKDPVKVIKEALSRALVYYYPFAGRL 87 (152)
Q Consensus 8 ~~~V~i~~~~~V~P~~~~t~~~~~~LS~lD~~~~~~~~~~~v~fy~~~~~~~~~~~~~v~~Lk~sLs~~L~~f~plAGRl 87 (152)
.|+|++.++++|+|+ .+||++.++||++|++ ...+|++.+|||+.+.. .....+++||+|||++|++||||||||
T Consensus 5 ~~~V~i~~~~~V~P~-~~tp~~~~~LS~lD~~-~~~~~~~~~~~y~~~~~---~~~~~~~~Lk~sLs~~L~~f~plAGRl 79 (439)
T 4g22_A 5 SMKIEVKESTMVRPA-QETPGRNLWNSNVDLV-VPNFHTPSVYFYRPTGS---SNFFDAKVLKDALSRALVPFYPMAGRL 79 (439)
T ss_dssp -CCEEEEEEEEECCS-SCCCCCEECCCHHHHS-CCTTCCCEEEEECCCSC---TTTTCHHHHHHHHHHHTTTTGGGGCEE
T ss_pred ceEEEEeeeEEEeCC-CCCCCCeecCChhHhC-ccccceeeEEEEcCCCC---ccccHHHHHHHHHHHHHhhccccceee
Confidence 478999999999999 9999899999999987 56789999999986432 223568999999999999999999999
Q ss_pred eecCCCcEEEEecCCCeEEEEEEecCCccccCCCCCCCCcccccccCCcCCCCCCCCCCCeEeeC
Q 048162 88 REGSNGKLMVDCNGEGVLFTEADADFSLDQLGDDEIKPPCPYLDELLYDVPGSEGILGCPLLLIR 152 (152)
Q Consensus 88 ~~~~~g~~~i~cn~~Gv~fveA~~~~~l~~l~~~~~~~~~~~~~~lv~~~~~~~~~~~~PLl~vQ 152 (152)
+++++|+++|+|||+||.|+||+++++++|+++ .. +.+.+++|+|..+..++..+.|+|+||
T Consensus 80 ~~~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~--~~-p~~~~~~l~p~~~~~~~~~~~pll~vQ 141 (439)
T 4g22_A 80 KRDEDGRIEIECNGEGVLFVEAESDGVVDDFGD--FA-PTLELRRLIPAVDYSQGISSYALLVLQ 141 (439)
T ss_dssp EECTTSCEEEECCCCCEEEEEEEESSCGGGGTT--CC-CCGGGGGGSCCCCTTSCTTSSCSEEEE
T ss_pred eeCCCCCEEEEECCCCCEEEEEEcCCcHHHhcC--CC-CCHHHHhcCCCCCcccccccCceeEEE
Confidence 999899999999999999999999999999977 44 556788899876654445578999998
No 2
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=99.94 E-value=6.8e-27 Score=197.24 Aligned_cols=144 Identities=21% Similarity=0.233 Sum_probs=110.0
Q ss_pred CCceeEEEEecceEEeCCCCC-CCccccCCCchhhcccccccccEEEEEecCCCCCCC--CCCcHHHHHHHHHHhhhhhc
Q 048162 5 LLQEFSVKRRAPELIGPALAP-KSHEVKQLSDIDDQQGLWFQVPLIFFYKNNPSPSMK--GKDPVKVIKEALSRALVYYY 81 (152)
Q Consensus 5 ~~~~~~V~i~~~~~V~P~~~~-t~~~~~~LS~lD~~~~~~~~~~~v~fy~~~~~~~~~--~~~~v~~Lk~sLs~~L~~f~ 81 (152)
|.+..+|+|+++++|+|+ .+ ++.+.++||++|+.+....|++.+|||+.+. ..+ ....+++||+||+++|++||
T Consensus 1 ~~~~~~v~v~~~~~V~P~-~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~--~~~~~~~~~~~~Lk~sLs~~L~~~~ 77 (454)
T 2e1v_A 1 MASLPILTVLEQSQVSPP-PDTLGDKSLQLTFFDFFWLRSPPINNLFFYELPI--TRSQFTETVVPNIKHSLSITLKHFY 77 (454)
T ss_dssp -----CEEEEEEEEECCC-TTSCCCEEEECCHHHHTTTTCCCEEEEEEEECCC--CHHHHHHTHHHHHHHHHHHHHTTCG
T ss_pred CCCCceEEEEEEEEEeCC-CCCCCCceecCchHHhhhhccCCccEEEEEeCCC--CcchhhHHHHHHHHHHHHHHhhhcc
Confidence 344567999999999998 77 4568899999998765556999999998632 101 22568999999999999999
Q ss_pred CCceeee-ec-CCCcEEEEec-CCCeEEEEEEecCCccccCCCCCCCCcccccccCCcCCCCC---CCCCCCeEeeC
Q 048162 82 PFAGRLR-EG-SNGKLMVDCN-GEGVLFTEADADFSLDQLGDDEIKPPCPYLDELLYDVPGSE---GILGCPLLLIR 152 (152)
Q Consensus 82 plAGRl~-~~-~~g~~~i~cn-~~Gv~fveA~~~~~l~~l~~~~~~~~~~~~~~lv~~~~~~~---~~~~~PLl~vQ 152 (152)
||||||+ .+ ++|+++|+|| ++||.|+||+++.+++++... ...+.+.+++|+|..+... +..+.|++.||
T Consensus 78 plAGRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~-~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQ 153 (454)
T 2e1v_A 78 PFVGKLVVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGN-HPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQ 153 (454)
T ss_dssp GGGSEEEECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTSSS-SCEEGGGGGGGSCCCCCCEECSSCEEEECEEEE
T ss_pred ccceeeeeccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhcCC-CCCcchhhhcCCCCCCCcccccccccCceEEEE
Confidence 9999998 65 6899999999 599999999999999999651 1124456778888665322 11245999998
No 3
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=99.93 E-value=2.9e-26 Score=192.00 Aligned_cols=136 Identities=27% Similarity=0.412 Sum_probs=107.6
Q ss_pred eEEEEecceEEeCCCCCCCcc--ccCCCchhhcccccccccEEEEEecCCCCCCCCCCcHHHHHHHHHHhhhhhcCCcee
Q 048162 9 FSVKRRAPELIGPALAPKSHE--VKQLSDIDDQQGLWFQVPLIFFYKNNPSPSMKGKDPVKVIKEALSRALVYYYPFAGR 86 (152)
Q Consensus 9 ~~V~i~~~~~V~P~~~~t~~~--~~~LS~lD~~~~~~~~~~~v~fy~~~~~~~~~~~~~v~~Lk~sLs~~L~~f~plAGR 86 (152)
|+|+++++++|+|+ .+|+.+ .++||++|+. ....|++.+|||+.+.....+....+++||+||+++|++|||||||
T Consensus 3 m~v~v~~~~~V~P~-~ptp~~~~~~~LS~lD~~-~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGR 80 (421)
T 2bgh_A 3 PQMEKVSEELILPS-SPTPQSLKCYKISHLDQL-LLTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAGR 80 (421)
T ss_dssp -CEEEEEEEEEECS-SCCCTTSCCCBCCHHHHT-SCSSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTTTSGGGGSE
T ss_pred ceEEEeeeEEEeCC-CCCCCCCcccCCChHHhc-ccccccceEEEEeCCCccccchhhHHHHHHHHHHHHhhhcchhccc
Confidence 67999999999999 888754 8999999986 5678999999998643100112347899999999999999999999
Q ss_pred eeecCCCcEEEEecCCCeEEEEEEecCCccccCCCCCCCCcccccccCCcCCCCC---CCCCCCeEeeC
Q 048162 87 LREGSNGKLMVDCNGEGVLFTEADADFSLDQLGDDEIKPPCPYLDELLYDVPGSE---GILGCPLLLIR 152 (152)
Q Consensus 87 l~~~~~g~~~i~cn~~Gv~fveA~~~~~l~~l~~~~~~~~~~~~~~lv~~~~~~~---~~~~~PLl~vQ 152 (152)
|+. +++|+||++||.|+||+++++++++.+ ..++.+.+++|+|.....+ ...+.|++.+|
T Consensus 81 l~~----~~~i~c~~~Gv~fv~A~~d~~l~~~~~--~~p~~~~~~~l~p~~~~~~~~~~~~~~pll~vQ 143 (421)
T 2bgh_A 81 INV----NSSVDCNDSGVPFVEARVQAQLSQAIQ--NVVELEKLDQYLPSAAYPGGKIEVNEDVPLAVK 143 (421)
T ss_dssp EET----TTEEECCCCCEEEEEEEESSCHHHHHS--CCSSGGGGGGGSSSCSSSSSSSCCCTTCSEEEE
T ss_pred cCC----CcEEEEcCCceEEEEEEEcCCHHHHhc--cCCChHHHHhcCCCCCCccccccccCCceEEEE
Confidence 962 699999999999999999999999976 2244446778887553221 03468999998
No 4
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=99.93 E-value=1.7e-26 Score=194.65 Aligned_cols=138 Identities=18% Similarity=0.213 Sum_probs=110.3
Q ss_pred EEEecceEEeCCCCC-CCccccCCCchhhcccccccccEEEEEecCCCCCCC--CCCcHHHHHHHHHHhhhhhcCCceee
Q 048162 11 VKRRAPELIGPALAP-KSHEVKQLSDIDDQQGLWFQVPLIFFYKNNPSPSMK--GKDPVKVIKEALSRALVYYYPFAGRL 87 (152)
Q Consensus 11 V~i~~~~~V~P~~~~-t~~~~~~LS~lD~~~~~~~~~~~v~fy~~~~~~~~~--~~~~v~~Lk~sLs~~L~~f~plAGRl 87 (152)
|+|+++++|+|+ .+ ++.+.++||++|+.+....|++.+|||+.+. ... ....+++||+||+++|++||||||||
T Consensus 2 v~v~~~~~V~P~-~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~--~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl 78 (453)
T 2xr7_A 2 ASVIEQCQVVPS-PGSATELTLPLTYFDHVWLAFHRMRRILFYKLPI--SRPDFVQTIIPTLKDSLSLTLKYYLPLAGNV 78 (453)
T ss_dssp CEEEEESCCCCC-TTCCSEEEEECCHHHHGGGGSCCEEEEEEEECCC--CSHHHHHTHHHHHHHHHHHHHTTSGGGGSCC
T ss_pred eEEEEEEEecCC-CCCCCCceECCCHHHhhhhhcCCccEEEEEeCCC--CCchhHHHHHHHHHHHHHHHhhhccccCeeE
Confidence 789999999998 77 4568899999998765556999999998643 111 23568999999999999999999999
Q ss_pred eecC--CCcEEEEec-CCCeEEEEEEecCCccccCCCCCCCCcccccccCCcCCCCCC---CCCCCeEeeC
Q 048162 88 REGS--NGKLMVDCN-GEGVLFTEADADFSLDQLGDDEIKPPCPYLDELLYDVPGSEG---ILGCPLLLIR 152 (152)
Q Consensus 88 ~~~~--~g~~~i~cn-~~Gv~fveA~~~~~l~~l~~~~~~~~~~~~~~lv~~~~~~~~---~~~~PLl~vQ 152 (152)
+.++ +|+++|+|| ++||.|+||+++.+++++... ...+.+.+++|+|..+.... ..+.|++.||
T Consensus 79 ~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~-~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQ 148 (453)
T 2xr7_A 79 ACPQDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGY-HPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQ 148 (453)
T ss_dssp EEESSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCS-SCCCGGGGGGGSCCCCCCEEETTEEECCCEEEE
T ss_pred EccCCCCCCEEEEecCCCceEEEEEecCCCHHHhhcc-CCCChhhhhcCCCCCCCcccccccccCCeEEEE
Confidence 9986 899999999 599999999999999999651 22355667889886553221 1128999998
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=99.70 E-value=1.5e-17 Score=139.67 Aligned_cols=118 Identities=15% Similarity=0.139 Sum_probs=83.5
Q ss_pred cCCCchhhccc-ccccccEEEEEecCCCCCCCCCCcHHHHHHHHHHhhhhhcCCceeeeecC-----CCcEEEEecCCCe
Q 048162 31 KQLSDIDDQQG-LWFQVPLIFFYKNNPSPSMKGKDPVKVIKEALSRALVYYYPFAGRLREGS-----NGKLMVDCNGEGV 104 (152)
Q Consensus 31 ~~LS~lD~~~~-~~~~~~~v~fy~~~~~~~~~~~~~v~~Lk~sLs~~L~~f~plAGRl~~~~-----~g~~~i~cn~~Gv 104 (152)
++||++|++.. ..+|++.+|||+.+. .......+++||+||+++|++||||||||+.++ +|+++|.|++.|+
T Consensus 5 ~~Ls~lD~~~~~~~~y~~~~~~y~~~~--~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~~~ 82 (451)
T 2rkv_A 5 IQLDTLGQLPGLLSIYTQISLLYPVSD--SSQYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFEDVP 82 (451)
T ss_dssp EECCGGGGCTTGGGCEEEEEEEEECSC--GGGHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCSSC
T ss_pred ccCChhhcCccccccceeEEEEEECCC--CCCHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCCCC
Confidence 58999987642 578999999998522 111235789999999999999999999999865 6899999888777
Q ss_pred EEEEEEecC-----CccccCCCCCCCCccccc--ccCCc--CCCC--C-CCCCCCeEeeC
Q 048162 105 LFTEADADF-----SLDQLGDDEIKPPCPYLD--ELLYD--VPGS--E-GILGCPLLLIR 152 (152)
Q Consensus 105 ~fveA~~~~-----~l~~l~~~~~~~~~~~~~--~lv~~--~~~~--~-~~~~~PLl~vQ 152 (152)
.|++|+++. +++++.+ ...+.+.+. .|.|. .+.. + ...+.|+|.||
T Consensus 83 ~~~va~~~~d~~~p~~~~l~~--~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQ 140 (451)
T 2rkv_A 83 RVVVKDLRDDPSAPTIEGMRK--AGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQ 140 (451)
T ss_dssp EEEEEECTTCTTSCBHHHHHH--HTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEE
T ss_pred eEEEEeCCCCCCCCCHHHHHH--cCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEE
Confidence 799999875 5777753 223333232 23332 1211 1 22358999998
No 6
>1apy_B Aspartylglucosaminidase; glycosylasparaginase, hydrolase; HET: NAG BMA; 2.00A {Homo sapiens} SCOP: d.153.1.5 PDB: 1apz_B*
Probab=32.60 E-value=1.3e+02 Score=21.06 Aligned_cols=47 Identities=19% Similarity=0.299 Sum_probs=34.5
Q ss_pred CcHHHHHHHHHHhhhhhcC-CceeeeecCCCcEEEEecC----CCeEEEEEE
Q 048162 64 DPVKVIKEALSRALVYYYP-FAGRLREGSNGKLMVDCNG----EGVLFTEAD 110 (152)
Q Consensus 64 ~~v~~Lk~sLs~~L~~f~p-lAGRl~~~~~g~~~i~cn~----~Gv~fveA~ 110 (152)
.+-+..++++.+....|.- ..|-+..+.+|+..+.||. .+..|+.+.
T Consensus 76 ~~~~A~~~~i~~~~~~~~~~~ggvIa~d~~G~~~~~~n~~~~~~~F~~~v~~ 127 (141)
T 1apy_B 76 DPTIACQKVISRIQKHFPEFFGAVICANVTGSYGAACNKLSTFTQFSFMVYN 127 (141)
T ss_dssp CHHHHHHHHHHHHHHHCTTCCEEEEEEETTSCEEEEECCBTTBCEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHhcCCCcEEEEEEeCCCCEEEEeccCCCCCCeeEEEEc
Confidence 4667888888887777753 4556788889999999997 355565554
No 7
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=23.11 E-value=1.6e+02 Score=22.69 Aligned_cols=61 Identities=16% Similarity=0.150 Sum_probs=38.0
Q ss_pred cccCCCchhhcccccccccEEEEEecCCCCCCCCCCcHHHHHHHHHHhhhhhcCCceeeeecCCCcEE
Q 048162 29 EVKQLSDIDDQQGLWFQVPLIFFYKNNPSPSMKGKDPVKVIKEALSRALVYYYPFAGRLREGSNGKLM 96 (152)
Q Consensus 29 ~~~~LS~lD~~~~~~~~~~~v~fy~~~~~~~~~~~~~v~~Lk~sLs~~L~~f~plAGRl~~~~~g~~~ 96 (152)
..++||.++..+... .....+.|+-.. ....++|+.++.+++..++.|--++...+++...
T Consensus 6 ~~~pls~~Q~~~~~~-~y~~~~~~~l~g------~ld~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q 66 (422)
T 1q9j_A 6 VIRKLSHSEEVFAQY-EVFTSMTIQLRG------VIDVDALSDAFDALLETHPVLASHLEQSSDGGWN 66 (422)
T ss_dssp EEEECCHHHHHHHHT-TCEEEEEEEEES------CCCHHHHHHHHHHHHHHCGGGSEEEEECTTSSEE
T ss_pred eeecCCHHHHHHHhc-CceEEEEEEEec------CCCHHHHHHHHHHHHHhCccceEEEEecCCccee
Confidence 456778775432211 122233333222 1347899999999999999999999775544443
No 8
>1k2x_B Putative L-asparaginase; NTN hydrolase, asparginase, autoproteolysis, hydrolase; HET: CME; 1.65A {Escherichia coli} SCOP: d.153.1.5 PDB: 1jn9_B* 1t3m_B 2zal_B
Probab=21.16 E-value=1.6e+02 Score=20.56 Aligned_cols=49 Identities=14% Similarity=0.098 Sum_probs=37.5
Q ss_pred CcHHHHHHHHHHhhhhhcCCceeeeecCCCcEEEEecCCCeEEEEEEec
Q 048162 64 DPVKVIKEALSRALVYYYPFAGRLREGSNGKLMVDCNGEGVLFTEADAD 112 (152)
Q Consensus 64 ~~v~~Lk~sLs~~L~~f~plAGRl~~~~~g~~~i~cn~~Gv~fveA~~~ 112 (152)
.+-+..++++.+.+..+.-..|=|..+.+|++.+.||-+|..+..+..+
T Consensus 77 s~~eA~~~~i~~~~~~~~g~~GvIavd~~G~~~~~~nt~~m~~a~~~~~ 125 (143)
T 1k2x_B 77 SLAEACERVVMEKLPALGGSGGLIAIDHEGNVALPFNTEGMYRAWGYAG 125 (143)
T ss_dssp CHHHHHHHHHHTHHHHTTCCEEEEEEETTCCEECCBSSSEEEEEEEETT
T ss_pred CHHHHHHHHHHHHHHhcCCceEEEEECCCCCEEEEEcCCCceEEEEcCC
Confidence 3566777777777777766778888888999988999999877666543
No 9
>3u5c_Q RP61R, 40S ribosomal protein S16-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_I 3o30_J 3o2z_J 3u5g_Q 1s1h_I 3jyv_I*
Probab=19.56 E-value=45 Score=23.50 Aligned_cols=19 Identities=32% Similarity=0.531 Sum_probs=16.7
Q ss_pred CcHHHHHHHHHHhhhhhcC
Q 048162 64 DPVKVIKEALSRALVYYYP 82 (152)
Q Consensus 64 ~~v~~Lk~sLs~~L~~f~p 82 (152)
.-+.+++.++|++|+.|++
T Consensus 76 gQA~AiR~aIArAL~~~~~ 94 (143)
T 3u5c_Q 76 SQVYAIRQAIAKGLVAYHQ 94 (143)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred cHHhHHHHHHHHHHHHHhh
Confidence 4688999999999999964
No 10
>3h0l_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_B 3h0r_B*
Probab=19.41 E-value=1.2e+02 Score=25.54 Aligned_cols=21 Identities=24% Similarity=0.324 Sum_probs=15.7
Q ss_pred EEEecCCCeEEEEEEecCCcc
Q 048162 96 MVDCNGEGVLFTEADADFSLD 116 (152)
Q Consensus 96 ~i~cn~~Gv~fveA~~~~~l~ 116 (152)
.|+.|..|++++|=.+.-++.
T Consensus 141 lvD~NRaGvPLiEIVTePd~~ 161 (478)
T 3h0l_B 141 LVDLNRAGTPLMEIVTEPDIR 161 (478)
T ss_dssp EEECSSTTCEEEEEEECTTBC
T ss_pred EEecCCCCCceEEEecCCCCC
Confidence 567888999999987754443
Done!