BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048165
(124 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359476165|ref|XP_002283141.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
GSO1-like [Vitis vinifera]
Length = 1464
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 71/131 (54%), Gaps = 10/131 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI----TTIQGLAKLKNL 56
L NLR L+VLDLS+ NI+S L + + +T+LK L L GI T +QGL KLKNL
Sbjct: 688 LNNLRNLEVLDLSST-NISSSILQIVEV--MTSLKALSLRSNGINGSQTALQGLCKLKNL 744
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ---NLTTLGLANLPNLKTLDLRDCGIT 113
+ LDLS N + L NLT+L+ LDLS N+ NL + A L L+ L L
Sbjct: 745 QELDLSDNGFEGSVSPCLGNLTSLRALDLSKNRFSGNLDSSLFAGLMKLEFLSLSHNVFQ 804
Query: 114 TIQGIQQFTSY 124
T I F +
Sbjct: 805 TFPPISSFAKH 815
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 63/121 (52%), Gaps = 14/121 (11%)
Query: 1 LANLRYLQVLDLSAN-YNITS-GSLTRLGLANLTNLKKLDLDG---CGITTIQGLAKLKN 55
L +LR L+VL L N +NI++ SL RL L LK+L L G G T++ L L+N
Sbjct: 639 LKSLRKLRVLHLETNDFNISTLKSLGRLSL-----LKELYLGGNKLEGSVTLRELNNLRN 693
Query: 56 LEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN----QNLTTLGLANLPNLKTLDLRDCG 111
LE LDLSS L+ + +T+L+ L L N GL L NL+ LDL D G
Sbjct: 694 LEVLDLSSTNISSSILQIVEVMTSLKALSLRSNGINGSQTALQGLCKLKNLQELDLSDNG 753
Query: 112 I 112
Sbjct: 754 F 754
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 10/115 (8%)
Query: 17 NITSGSLTRLGLANLTNLKKLDL---DGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEG 73
NI GS+ L A L NL++LDL D T GL L+ L L L +N + +L+
Sbjct: 605 NILEGSIQEL--AALHNLEELDLSKNDLESFITTTGLKSLRKLRVLHLETNDFNISTLKS 662
Query: 74 LANLTNLQVLDLSGNQ---NLTTLGLANLPNLKTLDLRDCGITT--IQGIQQFTS 123
L L+ L+ L L GN+ ++T L NL NL+ LDL I++ +Q ++ TS
Sbjct: 663 LGRLSLLKELYLGGNKLEGSVTLRELNNLRNLEVLDLSSTNISSSILQIVEVMTS 717
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 28/95 (29%)
Query: 52 KLKNLEALDLSSNY-----------------------YLHGSLEGLANLTNLQVLDLSGN 88
KL NLE LDLS+N L GS++ LA L NL+ LDLS N
Sbjct: 569 KLNNLELLDLSNNTLDISILASLTELSSLKSLSLGTNILEGSIQELAALHNLEELDLSKN 628
Query: 89 ---QNLTTLGLANLPNLKTLDLR--DCGITTIQGI 118
+TT GL +L L+ L L D I+T++ +
Sbjct: 629 DLESFITTTGLKSLRKLRVLHLETNDFNISTLKSL 663
>gi|296082109|emb|CBI21114.3| unnamed protein product [Vitis vinifera]
Length = 682
Score = 61.6 bits (148), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 71/131 (54%), Gaps = 10/131 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI----TTIQGLAKLKNL 56
L NLR L+VLDLS+ NI+S L + + +T+LK L L GI T +QGL KLKNL
Sbjct: 244 LNNLRNLEVLDLSST-NISSSILQIVEV--MTSLKALSLRSNGINGSQTALQGLCKLKNL 300
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ---NLTTLGLANLPNLKTLDLRDCGIT 113
+ LDLS N + L NLT+L+ LDLS N+ NL + A L L+ L L
Sbjct: 301 QELDLSDNGFEGSVSPCLGNLTSLRALDLSKNRFSGNLDSSLFAGLMKLEFLSLSHNVFQ 360
Query: 114 TIQGIQQFTSY 124
T I F +
Sbjct: 361 TFPPISSFAKH 371
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 63/121 (52%), Gaps = 14/121 (11%)
Query: 1 LANLRYLQVLDLSAN-YNITS-GSLTRLGLANLTNLKKLDLDG---CGITTIQGLAKLKN 55
L +LR L+VL L N +NI++ SL RL L LK+L L G G T++ L L+N
Sbjct: 195 LKSLRKLRVLHLETNDFNISTLKSLGRLSL-----LKELYLGGNKLEGSVTLRELNNLRN 249
Query: 56 LEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN----QNLTTLGLANLPNLKTLDLRDCG 111
LE LDLSS L+ + +T+L+ L L N GL L NL+ LDL D G
Sbjct: 250 LEVLDLSSTNISSSILQIVEVMTSLKALSLRSNGINGSQTALQGLCKLKNLQELDLSDNG 309
Query: 112 I 112
Sbjct: 310 F 310
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 10/115 (8%)
Query: 17 NITSGSLTRLGLANLTNLKKLDL---DGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEG 73
NI GS+ L A L NL++LDL D T GL L+ L L L +N + +L+
Sbjct: 161 NILEGSIQEL--AALHNLEELDLSKNDLESFITTTGLKSLRKLRVLHLETNDFNISTLKS 218
Query: 74 LANLTNLQVLDLSGNQ---NLTTLGLANLPNLKTLDLRDCGITT--IQGIQQFTS 123
L L+ L+ L L GN+ ++T L NL NL+ LDL I++ +Q ++ TS
Sbjct: 219 LGRLSLLKELYLGGNKLEGSVTLRELNNLRNLEVLDLSSTNISSSILQIVEVMTS 273
>gi|386828223|ref|ZP_10115330.1| Leucine Rich Repeat (LRR)-containing protein [Beggiatoa alba B18LD]
gi|386429107|gb|EIJ42935.1| Leucine Rich Repeat (LRR)-containing protein [Beggiatoa alba B18LD]
Length = 1098
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L NL LDL ++ + GL L NL +LDLS N H S GL L NL LDLS
Sbjct: 282 GLEMLVNLSALDLRNNQLSHVSGLEMLVNLSSLDLSDNQLSHIS--GLETLQNLSSLDLS 339
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
GNQ GL L NL +LDLR+ ++++ G++
Sbjct: 340 GNQLSRVSGLETLVNLSSLDLRENQLSSVSGLE 372
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 66/138 (47%), Gaps = 33/138 (23%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L L+ L LDLS N L+R+ GL L NL LDL ++++ GL LKNL +L
Sbjct: 327 LETLQNLSSLDLSGN------QLSRVSGLETLVNLSSLDLRENQLSSVSGLEMLKNLSSL 380
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ-----------NLTTLGLA----------- 97
L SN S+ GL L NL VLDL GNQ +L L L
Sbjct: 381 YLGSNQL--NSISGLEQLKNLSVLDLHGNQLNSISELEGLIHLNVLALTENKFLATLSNE 438
Query: 98 --NLPNLKTLDLRDCGIT 113
+LP LKTL L++ IT
Sbjct: 439 LFDLPKLKTLWLKETTIT 456
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 17 NITSGSLTRL--GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
IT+ LT++ LA LT L LDL + ++ L L NL L LS Y L ++ GL
Sbjct: 138 EITNHRLTQVPTWLARLTQLTGLDLSNNQLQDLRVLETLVNLSTLYLS--YNLLSNVSGL 195
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
L NL +L LS NQ T LGL L NL LDLR+ ++ I G+++
Sbjct: 196 ETLVNLSILYLSSNQLDTVLGLETLINLSGLDLRNNKLSNILGLERLV 243
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 24 TRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH--------------- 68
T LGL L NL LDL ++ I GL +L NL +L L +N H
Sbjct: 213 TVLGLETLINLSGLDLRNNKLSNILGLERLVNLSSLYLRANQLSHVLELGMLVNLSELGL 272
Query: 69 -----GSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
S+ GL L NL LDL NQ GL L NL +LDL D ++ I G++
Sbjct: 273 SSNQLSSMSGLEMLVNLSALDLRNNQLSHVSGLEMLVNLSSLDLSDNQLSHISGLE 328
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L NL LDL G ++ + GL L NL +LDL N S+ GL L NL L L
Sbjct: 326 GLETLQNLSSLDLSGNQLSRVSGLETLVNLSSLDLRENQL--SSVSGLEMLKNLSSLYLG 383
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
NQ + GL L NL LDL + +I ++
Sbjct: 384 SNQLNSISGLEQLKNLSVLDLHGNQLNSISELE 416
>gi|124004058|ref|ZP_01688905.1| Rab family protein [Microscilla marina ATCC 23134]
gi|123990637|gb|EAY30117.1| Rab family protein [Microscilla marina ATCC 23134]
Length = 1165
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL L+ +DLS N LT L NL+NL+ +DL + + L L NLE++D
Sbjct: 352 LQNLPNLESIDLSDN---QISDLT--PLQNLSNLQSIDLSNNQVNHLASLQYLPNLESID 406
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
LS N L L NL +LQ +DLS NQ L NLPNL+++DL D I+ + +Q
Sbjct: 407 LSDNQI--NDLAPLQNLGDLQSIDLSNNQIHDLTPLQNLPNLESIDLSDNQISDLTPLQ 463
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSAN--YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL LQ +DLS N +++T L NL NL+ +DL I+ + L L +L++
Sbjct: 418 LQNLGDLQSIDLSNNQIHDLTP-------LQNLPNLESIDLSDNQISDLTPLQNLGSLQS 470
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
++L +N L L L +LQ ++LS NQ L LP+LK++DLRD I
Sbjct: 471 INLRNNQV--SDLSPLQALHDLQAINLSDNQISDLAPLQKLPHLKSIDLRDNQIEVF 525
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ +DLS N SL L NL+ +DL I + L L +L+++D
Sbjct: 374 LQNLSNLQSIDLSNNQVNHLASLQYL-----PNLESIDLSDNQINDLAPLQNLGDLQSID 428
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
LS+N +H L L NL NL+ +DLS NQ L NL +L++++LR+ ++ + +Q
Sbjct: 429 LSNNQ-IH-DLTPLQNLPNLESIDLSDNQISDLTPLQNLGSLQSINLRNNQVSDLSPLQ 485
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 63/119 (52%), Gaps = 7/119 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L +LR LQ LDL N LT L NL++L+ +DL I + L L NL+++D
Sbjct: 286 LQSLRNLQSLDLRNN---QISDLT--PLQNLSSLQSIDLRHNPINDLLPLQNLPNLQSID 340
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
L N+ L L NL NL+ +DLS NQ L NL NL+++DL + + + +Q
Sbjct: 341 LKYNHI--NDLAPLQNLPNLESIDLSDNQISDLTPLQNLSNLQSIDLSNNQVNHLASLQ 397
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 10/101 (9%)
Query: 20 SGSLTRLGLA-NLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLT 78
GSL L +A + N K++ I +Q L +L+ A+DLS N L+ L NL
Sbjct: 86 PGSLEHLRIAGHWPNQWKIE----DIGLLQNLPELR---AIDLSDNRI--SDLKPLQNLA 136
Query: 79 NLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
NLQ+LD+S N+ L NLP L+++ L + + +Q
Sbjct: 137 NLQMLDMSDNRVADLTPLQNLPGLQSIVLSKNKVRDLTPLQ 177
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 24/114 (21%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L L +L+ + L +T + L L+NL++LDL +N L L NL++LQ +DL
Sbjct: 264 LQALHSLQLIVLRDNPVTDLTPLQSLRNLQSLDLRNNQI--SDLTPLQNLSSLQSIDLRH 321
Query: 88 NQ---------------------NLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
N ++ L L NLPNL+++DL D I+ + +Q
Sbjct: 322 NPINDLLPLQNLPNLQSIDLKYNHINDLAPLQNLPNLESIDLSDNQISDLTPLQ 375
>gi|296082108|emb|CBI21113.3| unnamed protein product [Vitis vinifera]
Length = 975
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 71/131 (54%), Gaps = 10/131 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI----TTIQGLAKLKNL 56
L NLR L+VLDLS+ NI+S L + + +T+LK L L GI T +QGL KL+NL
Sbjct: 238 LNNLRNLEVLDLSST-NISSSILQIVEV--MTSLKALSLRSNGINGSQTALQGLCKLRNL 294
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ---NLTTLGLANLPNLKTLDLRDCGIT 113
+ LDLS N + L NLT+L+ LDLS N+ NL + A L L+ L L
Sbjct: 295 QELDLSDNGFEGSVSPCLGNLTSLRALDLSKNRFSGNLDSSLFAGLMKLEFLSLSHNVFQ 354
Query: 114 TIQGIQQFTSY 124
T I F +
Sbjct: 355 TFPPISSFAKH 365
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 61/118 (51%), Gaps = 14/118 (11%)
Query: 1 LANLRYLQVLDLSAN-YNITS-GSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L +LR L+VL L N +NI++ SL RL L LK+L L G ++ L L+NLE
Sbjct: 195 LKSLRKLRVLHLETNGFNISTLKSLGRLSL-----LKELYLGG---NKLEELNNLRNLEV 246
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGN----QNLTTLGLANLPNLKTLDLRDCGI 112
LDLSS L+ + +T+L+ L L N GL L NL+ LDL D G
Sbjct: 247 LDLSSTNISSSILQIVEVMTSLKALSLRSNGINGSQTALQGLCKLRNLQELDLSDNGF 304
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Query: 17 NITSGSLTRLGLANLTNLKKLDLDG---CGITTIQGLAKLKNLEALDLSSNYYLHGSLEG 73
NI GS+ L A L NL++LDL T +GL L+ L L L +N + +L+
Sbjct: 161 NILEGSIQEL--AALHNLEELDLSNNLLESFITTKGLKSLRKLRVLHLETNGFNISTLKS 218
Query: 74 LANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITT--IQGIQQFTS 123
L L+ L+ L L GN+ L NL NL+ LDL I++ +Q ++ TS
Sbjct: 219 LGRLSLLKELYLGGNK---LEELNNLRNLEVLDLSSTNISSSILQIVEVMTS 267
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 28/99 (28%)
Query: 52 KLKNLEALDLSSNY-----------------------YLHGSLEGLANLTNLQVLDLSGN 88
KL NLE LDLSSN L GS++ LA L NL+ LDLS N
Sbjct: 125 KLNNLELLDLSSNTLDISMLASLTELSSLKSLSLGTNILEGSIQELAALHNLEELDLSNN 184
Query: 89 ---QNLTTLGLANLPNLKTLDLRDCG--ITTIQGIQQFT 122
+TT GL +L L+ L L G I+T++ + + +
Sbjct: 185 LLESFITTKGLKSLRKLRVLHLETNGFNISTLKSLGRLS 223
>gi|343417958|emb|CCD19884.1| leucine-rich repeat region [Trypanosoma vivax Y486]
Length = 389
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 74/126 (58%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L++LDLS IT S L+ L++L+ LDL C GIT + L+KL +L L
Sbjct: 39 LSVLSSLRMLDLSHCTGITDVS----PLSELSSLRTLDLSHCTGITDVSPLSKLSSLRTL 94
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L++L++LDLS +T + L+ L +L+TLDL C GIT +
Sbjct: 95 DLSHCTAI-TDVSPLSKLSSLRMLDLSHCTGITDVSPLSKLSSLRTLDLSHCTGITDVSP 153
Query: 118 IQQFTS 123
+ + +S
Sbjct: 154 LSELSS 159
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L++LDLS IT S L+ L++L+ LDL C GIT + L++L +L L
Sbjct: 108 LSKLSSLRMLDLSHCTGITDVS----PLSKLSSLRTLDLSHCTGITDVSPLSELSSLRTL 163
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L++L+ LDLS +T + L+ L +L LDL C GIT +
Sbjct: 164 DLSHCTGI-TDVSPLSELSSLRTLDLSHCTGITDVSPLSKLSSLHELDLSHCTGITDVSL 222
Query: 118 IQQF 121
+ +F
Sbjct: 223 LYRF 226
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 69/148 (46%), Gaps = 29/148 (19%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ LDLS IT S L+ L++L+ LDL C GIT + L+KL +L L
Sbjct: 154 LSELSSLRTLDLSHCTGITDVS----PLSELSSLRTLDLSHCTGITDVSPLSKLSSLHEL 209
Query: 60 DLSSN---------YYLHG-------------SLEGLANLTNLQVLDLSGNQNLTTLG-L 96
DLS Y G + L+ L+ L+ LDLS +T + L
Sbjct: 210 DLSHCTGITDVSLLYRFFGLDKLGLSHCTGITDVSPLSKLSGLRTLDLSHCTGITDVSPL 269
Query: 97 ANLPNLKTLDLRDC-GITTIQGIQQFTS 123
+ L L LDL C GIT + + + +S
Sbjct: 270 SKLGGLCELDLSHCTGITDVSPLSKLSS 297
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ LDLS IT S L+ L L +LDL C GIT + L+KL +L L
Sbjct: 246 LSKLSGLRTLDLSHCTGITDVS----PLSKLGGLCELDLSHCTGITDVSPLSKLSSLRKL 301
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC 110
DLS + + L+ L++L+ LDLS + +T + L+ L L+ LDL C
Sbjct: 302 DLSHCTGI-TDVSPLSVLSSLRTLDLSHCRGITDVSPLSTLSGLEVLDLSGC 352
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 37 LDLDGC-GITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG 95
LDL C GIT + L+ L +L LDLS + + L+ L++L++LDLS +T +
Sbjct: 2 LDLSHCTGITDVSPLSVLSSLRMLDLSHCTGI-TDVSPLSVLSSLRMLDLSHCTGITDVS 60
Query: 96 -LANLPNLKTLDLRDC-GITTIQGIQQFTS 123
L+ L +L+TLDL C GIT + + + +S
Sbjct: 61 PLSELSSLRTLDLSHCTGITDVSPLSKLSS 90
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ LDLS IT S L+ L++L+ LDL C GIT + L+ L LE L
Sbjct: 292 LSKLSSLRKLDLSHCTGITDVS----PLSVLSSLRTLDLSHCRGITDVSPLSTLSGLEVL 347
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSG 87
DLS + LE L +L+ L+ L G
Sbjct: 348 DLSGCTGVRSGLESLCSLSFLRYLSFLG 375
>gi|358336464|dbj|GAA54963.1| acidic leucine-rich nuclear phosphoprotein 32-related protein
[Clonorchis sinensis]
Length = 572
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/98 (39%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 27 GLAN-LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
GL++ TNL+ L+L G+ + GL KL +L+ LDLS+N + G LE L N NL+ L+L
Sbjct: 37 GLSDEFTNLEVLNLVSVGLEDLSGLPKLPSLKILDLSNN-AISGGLEALLNCPNLETLNL 95
Query: 86 SGNQNLTT---LGLANLPNLKTLDLRDCGITTIQGIQQ 120
S N+ T L LA L L ++DL +C +T ++ ++
Sbjct: 96 SANKVATIDALLPLAKLSCLSSIDLFNCEVTGLENYRK 133
>gi|343414367|emb|CCD21012.1| leucine-rich repeat protein, putative [Trypanosoma vivax Y486]
Length = 1699
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 72/126 (57%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ LDLS IT S L+ L++L+ LDL C GIT + L+KL +L L
Sbjct: 1021 LSELSSLRTLDLSHCTGITDVS----PLSELSSLRTLDLSHCTGITDVSPLSKLSSLRTL 1076
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L++L+ LDLS +T + L+ L +L+TLDL C GIT +
Sbjct: 1077 DLSHCTGI-TDVSPLSELSSLRTLDLSHCTGITDVSPLSELSSLRTLDLSHCTGITDVSP 1135
Query: 118 IQQFTS 123
+ + +S
Sbjct: 1136 LSELSS 1141
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 72/126 (57%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ LDLS IT S L+ L++L+ LDL C GIT + L+KL +L L
Sbjct: 906 LSELSSLRTLDLSHCTGITDVS----PLSELSSLRTLDLSHCTGITDVSPLSKLSSLRTL 961
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L++L+ LDLS +T + L+ L +L+TLDL C GIT +
Sbjct: 962 DLSHCTGI-TDVSPLSELSSLRTLDLSHCTGITDVSPLSKLSSLRTLDLSHCTGITDVSP 1020
Query: 118 IQQFTS 123
+ + +S
Sbjct: 1021 LSELSS 1026
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 72/126 (57%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ LDLS IT S L+ L++L+ LDL C GIT + L+KL +L L
Sbjct: 1527 LSELSSLRTLDLSHCTGITDVS----PLSELSSLRTLDLSHCTGITDVSPLSKLSSLRTL 1582
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L++L+ LDLS +T + L+ L +L+TLDL C GIT +
Sbjct: 1583 DLSHCTGI-TDVSPLSELSSLRTLDLSHCTGITDVSPLSELSSLRTLDLSHCTGITDVSP 1641
Query: 118 IQQFTS 123
+ + +S
Sbjct: 1642 LSKLSS 1647
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 72/126 (57%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ LDLS IT S L+ L++L+ LDL C GIT + L++L +L L
Sbjct: 975 LSELSSLRTLDLSHCTGITDVS----PLSKLSSLRTLDLSHCTGITDVSPLSELSSLRTL 1030
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L++L+ LDLS +T + L+ L +L+TLDL C GIT +
Sbjct: 1031 DLSHCTGI-TDVSPLSELSSLRTLDLSHCTGITDVSPLSKLSSLRTLDLSHCTGITDVSP 1089
Query: 118 IQQFTS 123
+ + +S
Sbjct: 1090 LSELSS 1095
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 72/126 (57%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ LDLS IT S L+ L++L+ LDL C GIT + L++L +L L
Sbjct: 1550 LSELSSLRTLDLSHCTGITDVS----PLSKLSSLRTLDLSHCTGITDVSPLSELSSLRTL 1605
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L++L+ LDLS +T + L+ L +L+TLDL C GIT +
Sbjct: 1606 DLSHCTGI-TDVSPLSELSSLRTLDLSHCTGITDVSPLSKLSSLRTLDLSHCTGITDVSP 1664
Query: 118 IQQFTS 123
+ + +S
Sbjct: 1665 LSELSS 1670
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 69/126 (54%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L LDLS IT+ S L+ ++L+ LD+ C GIT + L+KL +L L
Sbjct: 653 LSKFSSLHTLDLSHCTGITNVS----PLSKFSSLRMLDISHCTGITNVSPLSKLSSLHTL 708
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L++L+ LD S +T + L+ L +L+TLD+ C GIT +
Sbjct: 709 DLSHCTGI-TDVSPLSKLSSLRTLDFSHCTGITNVSPLSELSSLRTLDISHCTGITDVSP 767
Query: 118 IQQFTS 123
+ + +S
Sbjct: 768 LSELSS 773
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ LDLS IT S L+ L++L+ LDL C GIT + L++L +L L
Sbjct: 1090 LSELSSLRTLDLSHCTGITDVS----PLSELSSLRTLDLSHCTGITDVSPLSELSSLRTL 1145
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L++L+ LDLS +T + L+ L +L TL+L C GIT +
Sbjct: 1146 DLSHCTGI-TDVSPLSELSSLRTLDLSHCTGITDVSPLSKLSSLCTLELSHCTGITDVSP 1204
Query: 118 IQQFTS 123
+ + +S
Sbjct: 1205 LSELSS 1210
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 71/126 (56%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ LDLS IT S L+ L++L+ LDL C GIT + L+KL +L L
Sbjct: 1343 LSVLSSLRTLDLSHCTGITDVS----PLSELSSLRTLDLSHCTGITDVSPLSKLSSLRTL 1398
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L++L+ L LS +T + L+ L +L+TLDL C GIT +
Sbjct: 1399 DLSHCTGI-TDVSPLSVLSSLRTLGLSHCTGITDVSPLSELSSLRTLDLSHCTGITDVSP 1457
Query: 118 IQQFTS 123
+ + +S
Sbjct: 1458 LSELSS 1463
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ LDLS IT S L+ ++L+ L L C GIT + L++L NL L
Sbjct: 1458 LSELSSLRTLDLSHCTGITDVS----PLSVFSSLRTLGLSHCTGITDVSPLSELSNLRTL 1513
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L++L+ LDLS +T + L+ L +L+TLDL C GIT +
Sbjct: 1514 DLSHCTGI-TDVSPLSELSSLRTLDLSHCTGITDVSPLSELSSLRTLDLSHCTGITDVSP 1572
Query: 118 IQQFTS 123
+ + +S
Sbjct: 1573 LSKLSS 1578
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 28 LANLTNLKKLDLDGC-GITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L+ L++ +KLDL C GIT + L+KL +L LDLS + ++ L ++L++LD+S
Sbjct: 561 LSALSSFEKLDLSHCTGITDVSPLSKLSSLHTLDLSHCTGI-TNVSPLLKFSSLRMLDIS 619
Query: 87 GNQNLTTLG-LANLPNLKTLDLRDC-GITTIQGIQQFTS 123
+T + L+ L +L+TLDL C GIT + + +F+S
Sbjct: 620 HCTGITNVSPLSELSSLRTLDLSHCTGITDVSPLSKFSS 658
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ + LQ LDLS +T S L+ + L+KL L C GIT + L++L +L L
Sbjct: 791 LSKISTLQKLDLSHCTGVTDVS----PLSKMIGLEKLYLSHCTGITDVPPLSELSSLRML 846
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L++L LDLS +T + L+ L +L+TLDL C GIT +
Sbjct: 847 DLSHCTGI-TDVSPLSELSSLHTLDLSHCTGITDVSPLSELSSLRTLDLSHCTGITDVSP 905
Query: 118 IQQFTS 123
+ + +S
Sbjct: 906 LSELSS 911
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L L++LD+S IT+ S L+ L++L+ LDL C GIT + L+K +L L
Sbjct: 607 LLKFSSLRMLDISHCTGITNVS----PLSELSSLRTLDLSHCTGITDVSPLSKFSSLHTL 662
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + ++ L+ ++L++LD+S +T + L+ L +L TLDL C GIT +
Sbjct: 663 DLSHCTGI-TNVSPLSKFSSLRMLDISHCTGITNVSPLSKLSSLHTLDLSHCTGITDVSP 721
Query: 118 IQQFTS 123
+ + +S
Sbjct: 722 LSKLSS 727
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ LDLS I + S L+NL++L+ L+L C GIT + L+ L +L L
Sbjct: 1297 LSELSSLRTLDLSHCRGIANVS----PLSNLSSLRMLNLSHCTGITDVSPLSVLSSLRTL 1352
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L++L+ LDLS +T + L+ L +L+TLDL C GIT +
Sbjct: 1353 DLSHCTGI-TDVSPLSELSSLRTLDLSHCTGITDVSPLSKLSSLRTLDLSHCTGITDVSP 1411
Query: 118 IQQFTS 123
+ +S
Sbjct: 1412 LSVLSS 1417
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Query: 28 LANLTNLKKLDLDGC-GITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L+ L++L+ LDL C GIT + L++L +L LDLS + + L+ L++L+ LDLS
Sbjct: 837 LSELSSLRMLDLSHCTGITDVSPLSELSSLHTLDLSHCTGI-TDVSPLSELSSLRTLDLS 895
Query: 87 GNQNLTTLG-LANLPNLKTLDLRDC-GITTIQGIQQFTS 123
+T + L+ L +L+TLDL C GIT + + + +S
Sbjct: 896 HCTGITDVSPLSELSSLRTLDLSHCTGITDVSPLSELSS 934
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 74/145 (51%), Gaps = 23/145 (15%)
Query: 1 LANLRYLQVLDLSANYNITS-------GSLTRLGLAN------------LTNLKKLDLDG 41
L+ L L+ LDLS IT SL LGL++ L++L+ LDL
Sbjct: 1389 LSKLSSLRTLDLSHCTGITDVSPLSVLSSLRTLGLSHCTGITDVSPLSELSSLRTLDLSH 1448
Query: 42 C-GITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANL 99
C GIT + L++L +L LDLS + + L+ ++L+ L LS +T + L+ L
Sbjct: 1449 CTGITDVSPLSELSSLRTLDLSHCTGI-TDVSPLSVFSSLRTLGLSHCTGITDVSPLSEL 1507
Query: 100 PNLKTLDLRDC-GITTIQGIQQFTS 123
NL+TLDL C GIT + + + +S
Sbjct: 1508 SNLRTLDLSHCTGITDVSPLSELSS 1532
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ LD S IT+ S L+ L++L+ LD+ C GIT + L++L +L L
Sbjct: 722 LSKLSSLRTLDFSHCTGITNVS----PLSELSSLRTLDISHCTGITDVSPLSELSSLRTL 777
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + ++ L+ ++ LQ LDLS +T + L+ + L+ L L C GIT +
Sbjct: 778 DLSHCTDI-TNVSPLSKISTLQKLDLSHCTGVTDVSPLSKMIGLEKLYLSHCTGITDVPP 836
Query: 118 IQQFTS 123
+ + +S
Sbjct: 837 LSELSS 842
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 66/120 (55%), Gaps = 12/120 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ LDLS IT S L+ L++L L+L C GIT + L++L +L L
Sbjct: 1159 LSELSSLRTLDLSHCTGITDVS----PLSKLSSLCTLELSHCTGITDVSPLSELSSLRTL 1214
Query: 60 DLSSNYYLHG--SLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTI 115
DLS + G + L+ L+N LDLS +T + L+ L +L+TLDL C GIT +
Sbjct: 1215 DLS---HCRGITDVSPLSELSNFVQLDLSHCTGITDVSPLSVLSSLRTLDLSYCTGITNV 1271
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 7/109 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ LDLS IT S L+ L++L+ LDL C GIT + L+KL +L L
Sbjct: 1596 LSELSSLRTLDLSHCTGITDVS----PLSELSSLRTLDLSHCTGITDVSPLSKLSSLRTL 1651
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDL 107
DLS + + L+ L++L+ LDL +T + L+ L +L TLD
Sbjct: 1652 DLSHCTGI-TDVSPLSELSSLRTLDLLHCTGITDVSPLSELSSLGTLDF 1699
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 31/149 (20%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC------------------ 42
L+ L LDLS IT S L+ L++L+ LDL C
Sbjct: 1228 LSELSNFVQLDLSHCTGITDVS----PLSVLSSLRTLDLSYCTGITNVSPLSNLSSLRSL 1283
Query: 43 ------GITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG- 95
GIT + L++L +L LDLS + ++ L+NL++L++L+LS +T +
Sbjct: 1284 DLSHCTGITDVSPLSELSSLRTLDLSHCRGI-ANVSPLSNLSSLRMLNLSHCTGITDVSP 1342
Query: 96 LANLPNLKTLDLRDC-GITTIQGIQQFTS 123
L+ L +L+TLDL C GIT + + + +S
Sbjct: 1343 LSVLSSLRTLDLSHCTGITDVSPLSELSS 1371
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L+ L +S IT S L+ + L+KL L C GIT + L+ L + E L
Sbjct: 446 LSVFSSLRTLGISHCTGITDVS----PLSKMNGLQKLYLSHCTGITDVPPLSALSSFEKL 501
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L++L+ LD+S +T + L+ + L+ L L C GIT +
Sbjct: 502 DLSHCTGI-TDVSPLSVLSSLRTLDISHCTGITDVSPLSKMNGLQKLYLSHCTGITDVPP 560
Query: 118 IQQFTSY 124
+ +S+
Sbjct: 561 LSALSSF 567
>gi|290892518|ref|ZP_06555511.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
J2-071]
gi|290557827|gb|EFD91348.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
J2-071]
Length = 1775
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ L LS N N+T+ + + +L LK L LDGCGIT+I L L LE LD
Sbjct: 382 LNNLPKLQTLVLSDNENLTNIT----AITDLPQLKTLTLDGCGITSIGTLDNLPKLEKLD 437
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
L N S+ + +L L LD+S N NLTT+G L LP L+ L++ +T + +
Sbjct: 438 LKENKIT--SISEITDLPRLSYLDVSVN-NLTTIGDLKKLPLLEWLNVSSNRLTDVSTLT 494
Query: 120 QFTS 123
F S
Sbjct: 495 NFPS 498
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L NL L+L I+ + + L + +L+LSSN L +L G+ +L NLQ L++S
Sbjct: 174 GLQYLENLTSLNLSENNISDLAPIKDLVKMVSLNLSSNPTLV-NLSGVEDLVNLQELNVS 232
Query: 87 GNQNLTTLG-LANLPNLKTLDLRDCGITTIQ 116
N+ L + +A+LP LK + + C I T++
Sbjct: 233 ANKALEDISQVASLPLLKEISAQGCNIKTLE 263
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 8/116 (6%)
Query: 7 LQVLDLSANY---NITSGSLTRLGLANLTNLKKLDL-DGCGITTIQGLAKLKNLEALDLS 62
L++LDL NY N T G+L+ L++LTNL +L+L + I I GL+ L L L+L
Sbjct: 655 LRILDLQNNYLNYNGTEGNLS--SLSDLTNLTELNLRNNVYIDDISGLSTLSRLIYLNLD 712
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
SN + L+NLTNLQ L L N+ L++L NL L + I I +
Sbjct: 713 SNKI--EDISALSNLTNLQELTLENNKIENISALSDLENLNKLVVSKNKIIDISPV 766
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L N L +++S N T G +T L +LK+ I+ I + + NL +D
Sbjct: 493 LTNFPSLNYINISNNVIRTVGKMTELP-----SLKEFYAQNNSISDISMIHDMPNLRKVD 547
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
S+N L ++ NL LQ LD+ N+ +T + +LP+L+T + + IT I
Sbjct: 548 ASNN--LITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQANLITNI 600
>gi|404406789|ref|YP_006689504.1| internalin I [Listeria monocytogenes SLCC2376]
gi|404240938|emb|CBY62338.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2376]
Length = 1775
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ L LS N N+T+ + + +L LK L LDGCGIT+I L L LE LD
Sbjct: 382 LNNLPKLQTLVLSDNENLTNIT----AITDLPQLKTLTLDGCGITSIGTLDNLPKLEKLD 437
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
L N S+ + +L L LD+S N NLTT+G L LP L+ L++ +T + +
Sbjct: 438 LKENKIT--SISEITDLPRLSYLDVSVN-NLTTIGDLKKLPLLEWLNVSSNRLTDVSTLT 494
Query: 120 QFTS 123
F S
Sbjct: 495 NFPS 498
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L NL L+L I+ + + L + +L+LSSN L +L G+ +L NLQ L++S
Sbjct: 174 GLQYLENLTSLNLSENNISDLAPIKDLVKMVSLNLSSNPTLV-NLSGVEDLVNLQELNVS 232
Query: 87 GNQNLTTLG-LANLPNLKTLDLRDCGITTIQ 116
N+ L + +A+LP LK + + C I T++
Sbjct: 233 ANKALEDISQVASLPLLKEISAQGCNIKTLE 263
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 8/116 (6%)
Query: 7 LQVLDLSANY---NITSGSLTRLGLANLTNLKKLDL-DGCGITTIQGLAKLKNLEALDLS 62
L++LDL NY N T G+L+ L++LTNL +L+L + I I GL+ L L L+L
Sbjct: 655 LRILDLQNNYLNYNGTEGNLS--SLSDLTNLTELNLRNNVYIDDISGLSTLSRLIYLNLD 712
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
SN + L+NLTNLQ L L N+ L++L NL L + I I +
Sbjct: 713 SNKI--EDISALSNLTNLQELTLENNKIENISALSDLENLNKLVVSKNKIIDISPV 766
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L N L +++S N T G +T L +LK+ I+ I + + NL +D
Sbjct: 493 LTNFPSLNYINISNNVIRTVGKMTELP-----SLKEFYAQNNSISDISMIHDMPNLRKVD 547
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
S+N L ++ NL LQ LD+ N+ +T + +LP+L+T + + IT I
Sbjct: 548 ASNN--LITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQANLITNI 600
>gi|422417931|ref|ZP_16494886.1| internalin-I [Listeria seeligeri FSL N1-067]
gi|313634795|gb|EFS01226.1| internalin-I [Listeria seeligeri FSL N1-067]
Length = 1687
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 63/124 (50%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ L LS N N+T + +L LK + LDGCGIT I L L LE LD
Sbjct: 373 LENLPKLQTLILSGNENLTDVD----AINDLPQLKTVALDGCGITNIGTLENLPKLEKLD 428
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
+ N + + +L L LD S NQ LTT+G LA LP L L+L + + + I
Sbjct: 429 IKGNKVTD--ISEITDLPRLSYLDASENQ-LTTIGTLAKLPLLDWLNLSENQLKDVSAIN 485
Query: 120 QFTS 123
F S
Sbjct: 486 NFPS 489
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL-DLSSNYYLHGSLEGLANLTNLQVLDLS 86
++ +T L+ + L GC + ++ + LKNL L ++++N + L L NL LQ L LS
Sbjct: 328 ISGITTLEMIQLSGC--SKLKEITDLKNLPNLTNITANNCIIEDLGTLENLPKLQTLILS 385
Query: 87 GNQNLTTLGLAN-LPNLKTLDLRDCGITTI 115
GN+NLT + N LP LKT+ L CGIT I
Sbjct: 386 GNENLTDVDAINDLPQLKTVALDGCGITNI 415
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G L N+ +DL +T I L L + L+LSSN L L G+ LTNLQ L++S
Sbjct: 165 GFQYLENVTSVDLSENNLTDITPLTDLTKIVTLNLSSNQNLE-DLNGVEGLTNLQDLNVS 223
Query: 87 GNQNLTTLG-LANLPNLKTLDLRDCGITTIQ 116
++L + +A LP LK + + C I T++
Sbjct: 224 TCKSLADISPVAALPALKEISAQGCNIQTLE 254
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 11/122 (9%)
Query: 3 NLRYLQVLDLSA-------NY-NITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKL 53
NL Q+ D+SA NY N+++ S+T G + L +LK+ +T I + +
Sbjct: 472 NLSENQLKDVSAINNFPSLNYINVSNNSITTFGKMTELPSLKEFYGQFNKVTDISMIHDM 531
Query: 54 KNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
NL L++S+N L +L NL LQ LD+ N+ T + + P+L+T D I+
Sbjct: 532 PNLRKLNVSNN--LINNLGTFENLPKLQNLDIHSNKITNTTVIHDFPSLETYDASSNLIS 589
Query: 114 TI 115
T+
Sbjct: 590 TL 591
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 46 TIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
T+ + L NL L + NYY+ L GL++LTNL+ L L N+ + L NL L+ L
Sbjct: 664 TLSAFSDLTNLTELSMKDNYYIV-DLSGLSSLTNLRYLYLDNNKIVDVTPLGNLTELREL 722
Query: 106 DLRDCGITTIQGIQQFTS 123
L G IQ I +S
Sbjct: 723 TL---GTNKIQDISALSS 737
>gi|255030546|ref|ZP_05302497.1| hypothetical protein LmonL_18171 [Listeria monocytogenes LO28]
Length = 400
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ L LS N N+T+ + + +L LK L LDGCGIT+I L L LE LD
Sbjct: 77 LNNLPKLQTLVLSDNENLTNIT----AITDLPQLKTLTLDGCGITSIGTLDNLPKLEKLD 132
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
L N S+ + +L L LD+S N NLTT+G L LP L+ L++ ++ + +
Sbjct: 133 LKENQI--TSISEITDLPRLSYLDVSVN-NLTTIGDLKKLPLLEWLNVSSNRLSDVSTLT 189
Query: 120 QFTS 123
F S
Sbjct: 190 NFPS 193
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L N L +++S N T G +T L +LK+ I+ I + + NL +D
Sbjct: 188 LTNFPSLNYINISNNVIRTVGKMTELP-----SLKEFYAQNNSISDISMIHDMPNLRKVD 242
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
S+N L ++ NL LQ LD+ N+ +T + +LP+L+T + + IT I
Sbjct: 243 ASNN--LITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITNI 295
>gi|255017603|ref|ZP_05289729.1| hypothetical protein LmonF_07220 [Listeria monocytogenes FSL
F2-515]
Length = 419
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ L LS N N+T+ + + +L LK L LDGCGIT+I L L LE LD
Sbjct: 58 LNNLPKLQTLVLSDNENLTNIT----AITDLPQLKTLTLDGCGITSIGTLDNLPKLEKLD 113
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
L N S+ + +L L LD+S N NLTT+G L LP L+ L++ ++ + +
Sbjct: 114 LKENQI--TSISEITDLPRLSYLDVSVN-NLTTIGDLKKLPLLEWLNVSSNRLSDVSTLT 170
Query: 120 QFTS 123
F S
Sbjct: 171 NFPS 174
>gi|366047666|gb|AEX08458.1| expression site-associated protein 8 [Trypanosoma brucei gambiense]
Length = 676
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQGLAKLKNLEAL 59
+A +R L+ L LS +N+T G L +NL++LD+ GC + + L L NL+ L
Sbjct: 273 IAGVRSLEKLSLSGCWNVTKGLEE---LCKFSNLRELDISGCPVLGSAVVLRNLINLKVL 329
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
+S N L GL L NL+ L+LSG +++LG +ANL NLK LD+ C + G
Sbjct: 330 SVS-NCKNFKDLNGLEKLVNLEKLNLSGCHGVSSLGFVANLSNLKELDISGCESLVCFDG 388
Query: 118 IQ 119
+Q
Sbjct: 389 LQ 390
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGC-GITTIQGLAKLKNLEA 58
L L L+ L+LS + ++S LG +ANL+NLK+LD+ GC + GL L NLE
Sbjct: 343 LEKLVNLEKLNLSGCHGVSS-----LGFVANLSNLKELDISGCESLVCFDGLQDLNNLEV 397
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCG 111
L L + ++ + NL+ ++ LDLSG + +T+L GL L L+ L L CG
Sbjct: 398 LYL-RDVKSFTNVGAIKNLSKMRELDLSGCERITSLSGLETLKRLEELSLEGCG 450
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 66/133 (49%), Gaps = 23/133 (17%)
Query: 1 LANLRYLQVLDLSANYNITSG--------SLTRLGLA--NLTN-----------LKKLDL 39
L L+ L+ L L + NIT G LT L L N+T+ LK LD+
Sbjct: 202 LCRLKTLEALSLDSCINITKGFDKICALPQLTSLSLCQTNVTDKDLRCIHPDGKLKVLDI 261
Query: 40 DGCG-ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL-TTLGLA 97
C IT + +A +++LE L LS + + LE L +NL+ LD+SG L + + L
Sbjct: 262 SSCHEITDLTAIAGVRSLEKLSLSGCWNVTKGLEELCKFSNLRELDISGCPVLGSAVVLR 321
Query: 98 NLPNLKTLDLRDC 110
NL NLK L + +C
Sbjct: 322 NLINLKVLSVSNC 334
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 15/129 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDG-CGITTIQGLAKLKNLEAL 59
L NLR L++ N S +GL L L L++DG CG+T I GL +LK LEAL
Sbjct: 158 LRNLRKLRMKRTMVNDMWCSS----IGL--LKFLVHLEVDGSCGVTDITGLCRLKTLEAL 211
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANL-PN--LKTLDLRDC----GI 112
L S + + + L L L L N+T L + P+ LK LD+ C +
Sbjct: 212 SLDSCINITKGFDKICALPQLTSLSLC-QTNVTDKDLRCIHPDGKLKVLDISSCHEITDL 270
Query: 113 TTIQGIQQF 121
T I G++
Sbjct: 271 TAIAGVRSL 279
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 27 GLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
GL LT L++L L C ITTI + L+NL+ L L L GL L NL+ LDL
Sbjct: 572 GLQCLTGLEELYLIVCKKITTIGVVGNLRNLKCLSTCWCANLK-ELGGLERLVNLEKLDL 630
Query: 86 SGNQNLTT---LGLANLPNLK 103
SG L++ + L +LP L+
Sbjct: 631 SGCCGLSSSVFMELMSLPKLQ 651
>gi|34541475|ref|NP_905954.1| leucine-rich protein [Porphyromonas gingivalis W83]
gi|34397792|gb|AAQ66853.1| leucine-rich protein [Porphyromonas gingivalis W83]
Length = 1266
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL LT+L KL L I+ ++GL +L +L L+LS N LEGL LT+L L+LS
Sbjct: 226 GLERLTSLTKLRLRSNQISKLEGLERLTSLATLELSGNQI--RKLEGLERLTSLATLELS 283
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
GNQ GL L +L L LR I+ ++G+++ TS
Sbjct: 284 GNQISKLEGLERLSSLTKLRLRSNQISKLEGLERLTS 320
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL LT+L +L L I+ ++GL +L +L L+LS N LEGL LT+L L+LS
Sbjct: 160 GLERLTSLAELYLLDNQISKLEGLERLTSLATLELSGNQI--RKLEGLERLTSLATLELS 217
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
GNQ GL L +L L LR I+ ++G+++ TS
Sbjct: 218 GNQIRKLEGLERLTSLTKLRLRSNQISKLEGLERLTS 254
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +LT+L KL L I+ ++GL +L +L L L N LEGL LT+L L+LS
Sbjct: 138 GLDSLTSLTKLSLSDNQISKLEGLERLTSLAELYLLDNQI--SKLEGLERLTSLATLELS 195
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
GNQ GL L +L TL+L I ++G+++ TS
Sbjct: 196 GNQIRKLEGLERLTSLATLELSGNQIRKLEGLERLTS 232
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 17 NITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
+ S +++L GL LT+L KL L I+ ++GL +L +L L L N LEGL
Sbjct: 303 RLRSNQISKLEGLERLTSLTKLSLSDNQISKLEGLERLTSLAELYLLDNQI--RKLEGLE 360
Query: 76 NLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
LT+L L L NQ GL +L +L L L D I+ ++G+++ TS
Sbjct: 361 RLTSLTKLRLRSNQISKLEGLDSLTSLTKLSLSDNQISKLEGLERLTS 408
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 9 VLDLSANYNITSGSLT-RLGLANLTN----------LKKLDLDGCGITTIQGLAKLKNLE 57
+LDL YNI L+ + G++ N + +L L C I ++ L L+
Sbjct: 43 ILDLEKAYNIEIPDLSSQEGISWSVNRYFKQDSSGAVVELCLRECQIESMTWLIDFPALK 102
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQG 117
LDLS N LEGL LT+L L L NQ GL +L +L L L D I+ ++G
Sbjct: 103 KLDLSYNQI--SKLEGLERLTSLTKLRLRSNQIRKLEGLDSLTSLTKLSLSDNQISKLEG 160
Query: 118 IQQFTS 123
+++ TS
Sbjct: 161 LERLTS 166
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 17 NITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
+ S +++L GL +LT+L KL L I+ ++GL +L +L L L N LEGL
Sbjct: 369 RLRSNQISKLEGLDSLTSLTKLSLSDNQISKLEGLERLTSLAELYLLDNQI--RKLEGLD 426
Query: 76 NLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
L +L L L NQ GL L L+ LD+ I +I I+
Sbjct: 427 GLASLTRLSLRRNQISKLEGLDRLKVLRKLDVSGNDIQSIDDIK 470
>gi|434405931|ref|YP_007148816.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
gi|428260186|gb|AFZ26136.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
Length = 451
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 8 QVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY 66
Q L + N+ S ++ + L+NLTNL LDL I+ I+ L+ L NL +DLSSN
Sbjct: 68 QKLTKRSELNLESSEISDIKPLSNLTNLTTLDLSENQISDIKPLSNLTNLTDIDLSSNQI 127
Query: 67 LHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
++ L+NLTNL +DLS NQ L+NL NL LDL D I+ I+ + T
Sbjct: 128 --SDIKVLSNLTNLTDIDLSKNQISDIKVLSNLTNLTVLDLSDNQISDIKVLSNLT 181
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL L LDLS N I+ L+NLTNL +DL I+ I+ L+ L NL +D
Sbjct: 89 LSNLTNLTTLDLSENQ-ISDIK----PLSNLTNLTDIDLSSNQISDIKVLSNLTNLTDID 143
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
LS N ++ L+NLTNL VLDLS NQ L+NL NL ++ L + I+ I+ +
Sbjct: 144 LSKNQI--SDIKVLSNLTNLTVLDLSDNQISDIKVLSNLTNLTSVKLSENQISDIEVLSN 201
Query: 121 FT 122
T
Sbjct: 202 LT 203
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL L LDLS N G + L+NLT+L LDL I I+ L+ L NL +L
Sbjct: 309 LSNLTNLTDLDLSKNQ---IGDIK--PLSNLTSLTSLDLSKNQIADIKPLSNLTNLTSLS 363
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
L N + +E L+NLTNL LDLS NQ L+NL NL +DL + I+ I+ +
Sbjct: 364 LWRNQSID--IELLSNLTNLTSLDLSENQISDIKPLSNLTNLTDIDLSENQISDIKPLSN 421
Query: 121 FT 122
T
Sbjct: 422 LT 423
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L+NLTNL LDL I I+ L+ L +L +LDLS N ++ L+NLTNL L L
Sbjct: 308 PLSNLTNLTDLDLSKNQIGDIKPLSNLTSLTSLDLSKNQI--ADIKPLSNLTNLTSLSLW 365
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ++ L+NL NL +LDL + I+ I+ + T
Sbjct: 366 RNQSIDIELLSNLTNLTSLDLSENQISDIKPLSNLT 401
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 72/144 (50%), Gaps = 29/144 (20%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL L +DLS N I+ + L+NLTNL LDL I+ I+ L+ L NL ++
Sbjct: 133 LSNLTNLTDIDLSKNQ-ISDIKV----LSNLTNLTVLDLSDNQISDIKVLSNLTNLTSVK 187
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--------NLTTLG--------------LAN 98
LS N +E L+NLTNL VLDL NQ NLT L L+N
Sbjct: 188 LSENQI--SDIEVLSNLTNLTVLDLGYNQISDIKVLSNLTNLTYLSLWNNQIGDIKVLSN 245
Query: 99 LPNLKTLDLRDCGITTIQGIQQFT 122
L NL +L L D I+ I+ + T
Sbjct: 246 LTNLTSLSLWDNQISDIKPLSNLT 269
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 59/112 (52%), Gaps = 7/112 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL L LDLS N I L+NLTNL L L I+ L+ L NL +LD
Sbjct: 331 LSNLTSLTSLDLSKNQ-IADIK----PLSNLTNLTSLSLWRNQSIDIELLSNLTNLTSLD 385
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGI 112
LS N ++ L+NLTNL +DLS NQ L+NL L+ L +++ I
Sbjct: 386 LSENQI--SDIKPLSNLTNLTDIDLSENQISDIKPLSNLTKLEDLQIQNNPI 435
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L+NLTNL L L I+ I+ L+ L NL L L N ++ L+NLTNL LDLS
Sbjct: 264 PLSNLTNLTSLYLWDNQISDIKPLSNLTNLTYLYLWDNQI--ADIKPLSNLTNLTDLDLS 321
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L+NL +L +LDL I I+ + T
Sbjct: 322 KNQIGDIKPLSNLTSLTSLDLSKNQIADIKPLSNLT 357
>gi|47097221|ref|ZP_00234784.1| cell wall surface anchor family protein [Listeria monocytogenes
str. 1/2a F6854]
gi|258612341|ref|ZP_05711837.1| cell wall surface anchor family protein [Listeria monocytogenes
F6900]
gi|47014407|gb|EAL05377.1| cell wall surface anchor family protein [Listeria monocytogenes
str. 1/2a F6854]
gi|258611023|gb|EEW23631.1| cell wall surface anchor family protein [Listeria monocytogenes
F6900]
Length = 778
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ L LS N N+T+ + + +L LK L LDGCGIT+I L L LE LD
Sbjct: 385 LNNLPKLQTLVLSDNENLTNIT----AITDLPQLKTLTLDGCGITSIGTLDNLPKLEKLD 440
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
L N S+ + +L L LD+S N NLTT+G L LP L+ L++ ++ + +
Sbjct: 441 LKENQI--TSISEITDLPRLSYLDVSVN-NLTTIGDLKKLPLLEWLNVSSNRLSDVSTLT 497
Query: 120 QFTS 123
F S
Sbjct: 498 NFPS 501
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L NL L+L I+ + L L NL +L+LSSN L L G+ +L NLQ L++S
Sbjct: 177 GLQYLENLTSLNLSENNISDLAPLKDLVNLVSLNLSSNRTLVN-LSGVEDLVNLQELNVS 235
Query: 87 GNQNLTTLG-LANLPNLKTLDLRDCGITTIQ 116
N+ L + +A+LP LK + + C I T++
Sbjct: 236 ANKALEDISQVASLPVLKEISAQGCNIKTLE 266
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 7 LQVLDLSANY---NITSGSLTRLGLANLTNLKKLDL-DGCGITTIQGLAKLKNLEALDLS 62
L++LDL NY T G+L+ L++LTNL +L+L + I I GL+ L L L+L
Sbjct: 658 LRILDLQNNYLNYTGTEGNLS--SLSDLTNLMELNLRNNVYIDDISGLSTLSRLIYLNLD 715
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
SN + L+NLTNLQ L L N+ L++L NL L + I I +
Sbjct: 716 SNKI--EDISALSNLTNLQELTLENNKIENISALSDLENLNKLVVSKNKIIDISPVANM 772
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L N L +++S N T G +T L +LK+ I+ I + + NL +D
Sbjct: 496 LTNFPSLNYINISNNVIRTVGKMTELP-----SLKEFYAQNNSISDISMIHDMPNLRKVD 550
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
S+N L ++ NL LQ LD+ N+ +T + +LP+L+T + + IT I
Sbjct: 551 ASNN--LITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQANLITNI 603
>gi|343033702|gb|AEL79574.1| esag8 [Trypanosoma evansi]
Length = 584
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC---GITTIQGLAKLKNLE 57
+A +R L+ L LS +N+T G L +NL+KLD+ GC G + L L NL+
Sbjct: 273 IAGVRSLEKLSLSGCWNVTKGLEE---LCKFSNLRKLDISGCLVLGSAVV--LKNLINLK 327
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTI 115
L +S N L GL L NL+ L+LSG +++LG +ANL NLK LD+ C +
Sbjct: 328 VLSVS-NCKNFKDLNGLEILVNLEKLNLSGCHGVSSLGFVANLSNLKELDISGCESLVCF 386
Query: 116 QGIQ 119
G+Q
Sbjct: 387 DGLQ 390
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 9/108 (8%)
Query: 7 LQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGC-GITTIQGLAKLKNLEALDLSSN 64
L+ L+LS + ++S LG +ANL+NLK+LD+ GC + GL L NLE L L +
Sbjct: 349 LEKLNLSGCHGVSS-----LGFVANLSNLKELDISGCESLVCFDGLQDLNNLELLYL-RD 402
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCG 111
++ + NL+ ++ LDLSG + +T+L GL L L+ L L CG
Sbjct: 403 VKSFTNVGAIKNLSKMRELDLSGCERITSLSGLETLKRLEELSLEGCG 450
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 65/133 (48%), Gaps = 23/133 (17%)
Query: 1 LANLRYLQVLDLSANYNITSG--------SLTRLGL--ANLTN-----------LKKLDL 39
L L+ L+ L L + NIT G L L L N+T+ LK LD+
Sbjct: 202 LCRLKTLEALSLDSCINITKGFDKICALPQLMSLSLYQTNITDKDLRCIHPDGKLKVLDI 261
Query: 40 DGCG-ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL-TTLGLA 97
C IT + +A +++LE L LS + + LE L +NL+ LD+SG L + + L
Sbjct: 262 SSCHEITDLTAIAGVRSLEKLSLSGCWNVTKGLEELCKFSNLRKLDISGCLVLGSAVVLK 321
Query: 98 NLPNLKTLDLRDC 110
NL NLK L + +C
Sbjct: 322 NLINLKVLSVSNC 334
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 60/135 (44%), Gaps = 30/135 (22%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
+ NL ++ LDLS ITS S GL L L++L L+GCG I + + L +L L
Sbjct: 412 IKNLSKMRELDLSGCERITSLS----GLETLKRLEELSLEGCGEIMSFDPIWSLHHLRVL 467
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG------------------------ 95
+S L L GL LT L+ L L G + +TT+G
Sbjct: 468 YVSECGNLE-DLSGLQRLTGLEELYLIGCEEITTIGVVGNLRNLKYLSTCWCANLKELGG 526
Query: 96 LANLPNLKTLDLRDC 110
L L NL+ LDL C
Sbjct: 527 LERLVNLEKLDLSGC 541
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
+ +L +L+VL +S N+ S GL LT L++L L GC ITTI + L+NL+ L
Sbjct: 458 IWSLHHLRVLYVSECGNLEDLS----GLQRLTGLEELYLIGCEEITTIGVVGNLRNLKYL 513
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT---LGLANLPNLK 103
L L GL L NL+ LDLSG L++ + L +LP L+
Sbjct: 514 STCWCANLK-ELGGLERLVNLEKLDLSGCCGLSSSVFMELMSLPKLQ 559
>gi|18413553|emb|CAD21885.1| ESAG8 [Trypanosoma brucei]
Length = 676
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQGLAKLKNLEAL 59
+A +R L+ L LS +N+T G L L++L++LD+ GC + + L L NL+ L
Sbjct: 273 IAGVRSLEKLSLSGCWNVTKGLEE---LCKLSSLRELDISGCPVLGSAVVLRNLINLKVL 329
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
+S N L GL L NL+ L+LSG +++LG +ANL NLK LD+ C + G
Sbjct: 330 SVS-NCKNFKDLNGLERLVNLEKLNLSGCHGVSSLGFVANLSNLKELDISGCESLVCFDG 388
Query: 118 IQ 119
+Q
Sbjct: 389 LQ 390
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 9/113 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGC-GITTIQGLAKLKNLEA 58
L L L+ L+LS + ++S LG +ANL+NLK+LD+ GC + GL L NLE
Sbjct: 343 LERLVNLEKLNLSGCHGVSS-----LGFVANLSNLKELDISGCESLVCFDGLQDLNNLEV 397
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDC 110
L L + ++ + NL+ ++ LDLSG + +T+L GL L L+ +R C
Sbjct: 398 LYL-RDVKSFTNVGAIKNLSKMRELDLSGCERITSLSGLETLKRLRKFKIRGC 449
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
+ NL L+VL +S N+ S GL LT L++L L C ITTI + L+NL+ L
Sbjct: 550 IWNLGKLRVLYVSECGNLEDLS----GLQCLTGLEELYLIVCKKITTIGVVGNLRNLKCL 605
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT---LGLANLPNLK 103
L L GL L NL+ +DLSG L++ + L +LP L+
Sbjct: 606 STCWCANLK-ELGGLERLVNLEKVDLSGCCGLSSSVFMELMSLPKLQ 651
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L NLR L++ N S +GL L L L++DG G+T I GL +LK LEAL
Sbjct: 158 LRNLRKLRMKRTMVNDMWCSS----IGL--LKFLVHLEVDGSRGVTDITGLCRLKTLEAL 211
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANL-PN--LKTLDLRDC----GI 112
L S + + + L L L L N+T L + P+ LK LD+ C +
Sbjct: 212 SLDSCINITKGFDKICALPQLTSLSLC-QTNVTDKDLRCIHPDGKLKVLDISSCHEITDL 270
Query: 113 TTIQGIQQF 121
T I G++
Sbjct: 271 TAIAGVRSL 279
>gi|189094756|emb|CAQ57434.1| expression site-associated gene 8 (ESAG8) protein [Trypanosoma
brucei brucei]
Length = 630
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI-TTIQGLAKLKNLEAL 59
+A +R L+ L LS +N+T G L L++L++LD+ GC + + L L NL+ L
Sbjct: 273 IAGVRSLEKLSLSGCWNVTKGLEE---LCKLSSLRELDISGCPVLGSAVVLRNLINLKVL 329
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
+S N L GL L NL+ L+LSG +++LG +ANL NLK LD+ C + G
Sbjct: 330 SVS-NCKNFKDLNGLERLVNLEKLNLSGCHGVSSLGFVANLSNLKELDISGCESLVCFDG 388
Query: 118 IQ 119
+Q
Sbjct: 389 LQ 390
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGC-GITTIQGLAKLKNLEA 58
L L L+ L+LS + ++S LG +ANL+NLK+LD+ GC + GL L NLE
Sbjct: 343 LERLVNLEKLNLSGCHGVSS-----LGFVANLSNLKELDISGCESLVCFDGLQDLNNLEV 397
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCG 111
L L + ++ + NL+ ++ LDLSG + +T+L GL L L+ L L CG
Sbjct: 398 LYL-RDVKSFTNVGAIKNLSKMRELDLSGCERITSLSGLETLKRLEELSLEGCG 450
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
+ NLR + VL+LS N+ S GL LT LK+L L GC ITTI + L+NL+ L
Sbjct: 504 IWNLRNVCVLELSCCENLEDLS----GLQCLTGLKELYLIGCEEITTIGVVGNLRNLKCL 559
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT---LGLANLPNLK 103
L L GL L NL+ LDLSG L++ + L +LP L+
Sbjct: 560 STCWCANLK-ELGGLERLVNLEKLDLSGCCGLSSSVFMELMSLPKLQ 605
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 30/135 (22%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
+ +L +L+VL +S N+ S GL +T L++L L GC T + L+N+ L
Sbjct: 458 IWSLHHLRVLYVSECGNLEDLS----GLEGITGLEELYLHGCRKCTNFGPIWNLRNVCVL 513
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG------------------------ 95
+LS L L GL LT L+ L L G + +TT+G
Sbjct: 514 ELSCCENLE-DLSGLQCLTGLKELYLIGCEEITTIGVVGNLRNLKCLSTCWCANLKELGG 572
Query: 96 LANLPNLKTLDLRDC 110
L L NL+ LDL C
Sbjct: 573 LERLVNLEKLDLSGC 587
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L NLR L++ N S +GL L L L++DG G+T I GL +LK LEAL
Sbjct: 158 LRNLRKLRMKRTMVNDMWCSS----IGL--LKFLVHLEVDGSRGVTDITGLCRLKTLEAL 211
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANL-PN--LKTLDLRDC----GI 112
L S + + + L L L L N+T L + P+ LK LD+ C +
Sbjct: 212 SLDSCINITKGFDKICALPQLTSLSLC-QTNVTDKDLRCIHPDGKLKVLDISSCHEITDL 270
Query: 113 TTIQGIQQF 121
T I G++
Sbjct: 271 TAIAGVRSL 279
>gi|188995660|ref|YP_001929912.1| hypothetical protein PGN_1796 [Porphyromonas gingivalis ATCC 33277]
gi|188595340|dbj|BAG34315.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
33277]
Length = 1125
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL LT+L +L L G I+ ++GL L +L L LS N LEGL LT+L VLDLS
Sbjct: 135 GLERLTSLTELYLSGNQISKLEGLDHLTSLTTLFLSHNQI--SKLEGLDGLTSLTVLDLS 192
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
NQ GL +L +L LDLRD I ++G+ TS
Sbjct: 193 HNQISKLEGLDHLTSLTELDLRDNQIRKLEGLDHLTS 229
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +LT+L L L I+ ++GL L +L LDLS N LEGL +LT+L LDL
Sbjct: 157 GLDHLTSLTTLFLSHNQISKLEGLDGLTSLTVLDLSHNQI--SKLEGLDHLTSLTELDLR 214
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
NQ GL +L +L LDLRD I ++G+ +S
Sbjct: 215 DNQIRKLEGLDHLTSLTELDLRDNQIRKLEGLNALSS 251
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 63/118 (53%), Gaps = 9/118 (7%)
Query: 7 LQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY 65
L VLDLS N +++L GL +LT+L +LDL I ++GL L +L LDL N
Sbjct: 186 LTVLDLSHN------QISKLEGLDHLTSLTELDLRDNQIRKLEGLDHLTSLTELDLRDNQ 239
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
LEGL L++L L LSGNQ GL +L +L L L I+ I G+ TS
Sbjct: 240 I--RKLEGLNALSSLTELYLSGNQIAKLEGLDHLTSLINLFLSGNRISKIDGLASLTS 295
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL LT+L LDL I+ ++GL L +L LDL N LEGL +LT+L LDL
Sbjct: 179 GLDGLTSLTVLDLSHNQISKLEGLDHLTSLTELDLRDNQI--RKLEGLDHLTSLTELDLR 236
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
NQ GL L +L L L I ++G+ TS
Sbjct: 237 DNQIRKLEGLNALSSLTELYLSGNQIAKLEGLDHLTS 273
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L++L +L L G I ++GL L +L L LS N ++GLA+LT+L++L LS
Sbjct: 245 GLNALSSLTELYLSGNQIAKLEGLDHLTSLINLFLSGNRI--SKIDGLASLTSLRMLYLS 302
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
NQ L +L L+ LD+ I ++ I+
Sbjct: 303 KNQIDNLEELKDLTQLQKLDVSGNKIQSVDDIK 335
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 9 VLDLSANYNITSGSLT-RLGLANLTN----------LKKLDLDGCGITTIQGLAKLKNLE 57
+LDL YNI L+ + G++ N + +L L C I L ++
Sbjct: 40 ILDLEKTYNIDIPDLSSQEGISWSVNRYFKQDSSGAVVELRLRSCHIDGKAWLVDFPAVK 99
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQG 117
LDL + LEGL LT+L L LSGN+ GL L +L L L I+ ++G
Sbjct: 100 TLDLRGSQV--RKLEGLERLTSLTELYLSGNRIRKLEGLERLTSLTELYLSGNQISKLEG 157
Query: 118 IQQFTS 123
+ TS
Sbjct: 158 LDHLTS 163
>gi|386052609|ref|YP_005970167.1| internalin-I [Listeria monocytogenes Finland 1998]
gi|346645260|gb|AEO37885.1| internalin-I [Listeria monocytogenes Finland 1998]
Length = 1778
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ L LS N N+T+ + + +L LK L LDGCGIT+I L L LE LD
Sbjct: 385 LNNLPKLQTLVLSDNENLTNIT----AITDLPQLKTLTLDGCGITSIGTLDNLPKLEKLD 440
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
L N S+ + +L L LD+S N NLTT+G L LP L+ L++ ++ + +
Sbjct: 441 LKENQIT--SISEITDLPRLSYLDVSVN-NLTTIGDLKKLPLLEWLNVSSNRLSDVSTLT 497
Query: 120 QFTS 123
F S
Sbjct: 498 NFPS 501
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L NL L+L I+ + L L NL +L+LSSN L +L G+ +L NLQ L++S
Sbjct: 177 GLQYLENLTSLNLSENNISDLAPLKDLVNLVSLNLSSNRTLV-NLSGVEDLVNLQELNVS 235
Query: 87 GNQNLTTLG-LANLPNLKTLDLRDCGITTIQ 116
N+ L + +A+LP LK + + C I T++
Sbjct: 236 ANKALEDISQVASLPVLKEISAQGCNIKTLE 266
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Query: 7 LQVLDLSANY---NITSGSLTRLGLANLTNLKKLDL-DGCGITTIQGLAKLKNLEALDLS 62
L++LDL NY T G+L+ L++LTNL +L+L + I I GL+ L L L+L
Sbjct: 658 LRILDLQNNYLNYTGTEGNLS--SLSDLTNLTELNLRNNVYIDDISGLSTLSRLIYLNLD 715
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
SN + L+NLTNLQ L L N+ L++L NL L + I I +
Sbjct: 716 SNKI--EDISALSNLTNLQELTLENNKIENISALSDLENLNKLVVSKNKIIDISPV 769
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L N L +++S N T G +T L +LK+ I+ I + + NL +D
Sbjct: 496 LTNFPSLNYINISNNVIRTVGKMTELP-----SLKEFYAQNNSISDISMIHDMPNLRKVD 550
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
S+N L ++ NL LQ LD+ N+ +T + +LP+L+T + + IT I
Sbjct: 551 ASNN--LITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITNI 603
>gi|254829631|ref|ZP_05234318.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
N3-165]
gi|258602049|gb|EEW15374.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
N3-165]
Length = 1778
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ L LS N N+T+ + + +L LK L LDGCGIT+I L L LE LD
Sbjct: 385 LNNLPKLQTLVLSDNENLTNIT----AITDLPQLKTLTLDGCGITSIGTLDNLPKLEKLD 440
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
L N S+ + +L L LD+S N NLTT+G L LP L+ L++ ++ + +
Sbjct: 441 LKENQIT--SISEITDLPRLSYLDVSVN-NLTTIGDLKKLPLLEWLNVSSNRLSDVSTLT 497
Query: 120 QFTS 123
F S
Sbjct: 498 NFPS 501
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L NL L+L I+ + L L NL +L+LSSN L L G+ +L NLQ L++S
Sbjct: 177 GLQYLENLTSLNLSENNISDLAPLKDLVNLVSLNLSSNRTLVN-LSGVEDLVNLQELNVS 235
Query: 87 GNQNLTTLG-LANLPNLKTLDLRDCGITTIQ 116
N+ L + +A+LP LK + + C I T++
Sbjct: 236 ANKALEDISQVASLPVLKEISAQGCNIKTLE 266
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Query: 7 LQVLDLSANY---NITSGSLTRLGLANLTNLKKLDL-DGCGITTIQGLAKLKNLEALDLS 62
L++LDL NY T G+L+ L++LTNL +L+L + I I GL+ L L L+L
Sbjct: 658 LRILDLQNNYLNYTGTEGNLS--SLSDLTNLTELNLRNNVYIDDISGLSTLSRLIYLNLD 715
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
SN + L+NLTNLQ L L N+ L++L NL L + I I +
Sbjct: 716 SNKI--EDISALSNLTNLQELTLENNKIENISALSDLENLNKLVVSKNKIIDISPV 769
>gi|404412424|ref|YP_006698011.1| internalin I [Listeria monocytogenes SLCC7179]
gi|404238123|emb|CBY59524.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC7179]
Length = 1783
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ L LS N N+T+ + + +L LK L LDGCGIT+I L L LE LD
Sbjct: 385 LNNLPKLQTLVLSDNENLTNIT----AITDLPQLKTLTLDGCGITSIGTLDNLPKLEKLD 440
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
L N S+ + +L L LD+S N NLTT+G L LP L+ L++ ++ + +
Sbjct: 441 LKENQIT--SISEITDLPRLSYLDVSVN-NLTTIGDLKKLPLLEWLNVSSNRLSDVSTLT 497
Query: 120 QFTS 123
F S
Sbjct: 498 NFPS 501
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L NL L+L I+ + L L NL +L+LSSN L L G+ +L NLQ L++S
Sbjct: 177 GLQYLENLTSLNLSENNISDLAPLKDLVNLVSLNLSSNRTLVN-LSGVEDLVNLQELNVS 235
Query: 87 GNQNLTTLG-LANLPNLKTLDLRDCGITTIQ 116
N+ L + +A+LP LK + + C I T++
Sbjct: 236 ANKALEDISQVASLPVLKEISAQGCNIKTLE 266
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Query: 7 LQVLDLSANY---NITSGSLTRLGLANLTNLKKLDL-DGCGITTIQGLAKLKNLEALDLS 62
L++LDL NY T G+L+ L++LTNL +L+L + I I GL+ L L L+L
Sbjct: 658 LRILDLQNNYLNYTGTEGNLS--SLSDLTNLTELNLRNNVYIDDISGLSTLSRLIYLNLD 715
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
SN + L+NLTNLQ L L N+ L++L NL L + I I +
Sbjct: 716 SNKI--EDISALSNLTNLQELTLENNKIENISALSDLENLNKLVVSKNKIIDISPV 769
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L N L +++S N T G +T L +LK+ I+ I + + NL +D
Sbjct: 496 LTNFPSLNYINISNNVIRTVGKMTELP-----SLKEFYAQNNSISDISMIHDMPNLRKVD 550
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
S+N L ++ NL LQ LD+ N+ +T + +LP+L+T + + IT I
Sbjct: 551 ASNN--LITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITNI 603
>gi|16802378|ref|NP_463863.1| hypothetical protein lmo0333 [Listeria monocytogenes EGD-e]
gi|386049260|ref|YP_005967251.1| internalin-I [Listeria monocytogenes FSL R2-561]
gi|404282763|ref|YP_006683660.1| internalin I [Listeria monocytogenes SLCC2372]
gi|405757319|ref|YP_006686595.1| internalin I [Listeria monocytogenes SLCC2479]
gi|81849931|sp|Q8YA32.1|INLI_LISMO RecName: Full=Internalin-I; Flags: Precursor
gi|16409711|emb|CAC98412.1| lmo0333 [Listeria monocytogenes EGD-e]
gi|346423106|gb|AEO24631.1| internalin-I [Listeria monocytogenes FSL R2-561]
gi|404232265|emb|CBY53668.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2372]
gi|404235201|emb|CBY56603.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2479]
Length = 1778
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ L LS N N+T+ + + +L LK L LDGCGIT+I L L LE LD
Sbjct: 385 LNNLPKLQTLVLSDNENLTNIT----AITDLPQLKTLTLDGCGITSIGTLDNLPKLEKLD 440
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
L N S+ + +L L LD+S N NLTT+G L LP L+ L++ ++ + +
Sbjct: 441 LKENQIT--SISEITDLPRLSYLDVSVN-NLTTIGDLKKLPLLEWLNVSSNRLSDVSTLT 497
Query: 120 QFTS 123
F S
Sbjct: 498 NFPS 501
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L NL L+L I+ + L L NL +L+LSSN L L G+ +L NLQ L++S
Sbjct: 177 GLQYLENLTSLNLSENNISDLAPLKDLVNLVSLNLSSNRTLVN-LSGVEDLVNLQELNVS 235
Query: 87 GNQNLTTLG-LANLPNLKTLDLRDCGITTIQ 116
N+ L + +A+LP LK + + C I T++
Sbjct: 236 ANKALEDISQVASLPVLKEISAQGCNIKTLE 266
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Query: 7 LQVLDLSANY---NITSGSLTRLGLANLTNLKKLDL-DGCGITTIQGLAKLKNLEALDLS 62
L++LDL NY T G+L+ L++LTNL +L+L + I I GL+ L L L+L
Sbjct: 658 LRILDLQNNYLNYTGTEGNLS--SLSDLTNLTELNLRNNVYIDDISGLSTLSRLIYLNLD 715
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
SN + L+NLTNLQ L L N+ L++L NL L + I I +
Sbjct: 716 SNKI--EDISALSNLTNLQELTLENNKIENISALSDLENLNKLVVSKNKIIDISPV 769
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L N L +++S N T G +T L +LK+ I+ I + + NL +D
Sbjct: 496 LTNFPSLNYINISNNVIRTVGKMTELP-----SLKEFYAQNNSISDISMIHDMPNLRKVD 550
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
S+N L ++ NL LQ LD+ N+ +T + +LP+L+T + + IT I
Sbjct: 551 ASNN--LITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITNI 603
>gi|334145937|ref|YP_004508864.1| leucine-rich protein [Porphyromonas gingivalis TDC60]
gi|333803091|dbj|BAK24298.1| leucine-rich protein [Porphyromonas gingivalis TDC60]
Length = 1384
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +LT+L +LDL G I ++GL L +L LDLS N LE L LT+L LDLS
Sbjct: 346 GLDHLTSLTRLDLRGNQIRKLEGLDSLTSLTQLDLSGNQI--SKLESLNALTSLTELDLS 403
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
NQ T LA+L +L LDL D I ++G+ TS
Sbjct: 404 DNQIATLESLASLTSLTELDLSDNQIAKLEGLNALTS 440
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +L +L +LDL G I ++GL L +L LDLS N LEGL +LT+L L LS
Sbjct: 126 GLDHLASLTELDLSGNQIAKLEGLNALTSLTRLDLSDNQI--AKLEGLDSLTSLTELYLS 183
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
GNQ GL +L +L LDLR I ++G+ TS
Sbjct: 184 GNQIAKLEGLDHLTSLTRLDLRGNQIAKLEGLDHLTS 220
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 67/124 (54%), Gaps = 9/124 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
LA+L L LDLS N + +L GL LT+L LDL G I ++GL L +L L
Sbjct: 413 LASLTSLTELDLSDN------QIAKLEGLNALTSLTGLDLRGNQIAKLEGLDHLTSLTRL 466
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
DL N LEGL +LT+L LDLSGNQ L L +L LDL D I T++G+
Sbjct: 467 DLRGNQI--RKLEGLDSLTSLTQLDLSGNQISKLESLNALTSLTELDLSDNQIATLEGLN 524
Query: 120 QFTS 123
TS
Sbjct: 525 ALTS 528
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +LT+L +LDL G I+ ++ L L +L LDLS N +LE LA+LT+L LDLS
Sbjct: 368 GLDSLTSLTQLDLSGNQISKLESLNALTSLTELDLSDNQI--ATLESLASLTSLTELDLS 425
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
NQ GL L +L LDLR I ++G+ TS
Sbjct: 426 DNQIAKLEGLNALTSLTGLDLRGNQIAKLEGLDHLTS 462
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +LT+L +LDL G I+ ++ L L +L LDLS N +LEGL LT+L LDLS
Sbjct: 478 GLDSLTSLTQLDLSGNQISKLESLNALTSLTELDLSDNQI--ATLEGLNALTSLTRLDLS 535
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LA+L +L LDL D I ++G++ T
Sbjct: 536 DNQIAKLESLASLTSLTRLDLSDNQIAKLEGLKDLT 571
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +LT+L +LDL G I ++GL L +L LDLS N LE L LT+L LDLS
Sbjct: 456 GLDHLTSLTRLDLRGNQIRKLEGLDSLTSLTQLDLSGNQI--SKLESLNALTSLTELDLS 513
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
NQ T GL L +L LDL D I ++ + TS
Sbjct: 514 DNQIATLEGLNALTSLTRLDLSDNQIAKLESLASLTS 550
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 17 NITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
N++ + +L GL LT+L LDL G I ++GL L +L LDL N LEGL
Sbjct: 313 NLSDNQIAKLEGLNALTSLTGLDLRGNQIAKLEGLDHLTSLTRLDLRGNQI--RKLEGLD 370
Query: 76 NLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
+LT+L LDLSGNQ L L +L LDL D I T++ + TS
Sbjct: 371 SLTSLTQLDLSGNQISKLESLNALTSLTELDLSDNQIATLESLASLTS 418
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL LT+L L+L G I+ ++ LA L +L L+LS N LEGL LT+L LDL
Sbjct: 280 GLNALTSLTGLNLSGNQISKLESLASLTSLTRLNLSDNQI--AKLEGLNALTSLTGLDLR 337
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
GNQ GL +L +L LDLR I ++G+ TS
Sbjct: 338 GNQIAKLEGLDHLTSLTRLDLRGNQIRKLEGLDSLTS 374
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L +L L LDLS N +++L L LT+L +LDL I T++GL L +L L
Sbjct: 479 LDSLTSLTQLDLSGN------QISKLESLNALTSLTELDLSDNQIATLEGLNALTSLTRL 532
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
DLS N LE LA+LT+L LDLS NQ GL +L L+ LD+ I ++ I+
Sbjct: 533 DLSDNQI--AKLESLASLTSLTRLDLSDNQIAKLEGLKDLTQLQELDVSGNDIQSVDDIK 590
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L +L L LDLS N + +L GL LT+L +LDL I ++GL L +L L
Sbjct: 127 LDHLASLTELDLSGN------QIAKLEGLNALTSLTRLDLSDNQIAKLEGLDSLTSLTEL 180
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
LS N LEGL +LT+L LDL GNQ GL +L +L L+L I ++G+
Sbjct: 181 YLSGNQI--AKLEGLDHLTSLTRLDLRGNQIAKLEGLDHLTSLTGLNLSGNQIRKLEGLD 238
Query: 120 QFTS 123
TS
Sbjct: 239 SLTS 242
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +LT+L +LDL G I ++GL L +L L+LS N LEGL +LT+L L LS
Sbjct: 192 GLDHLTSLTRLDLRGNQIAKLEGLDHLTSLTGLNLSGNQI--RKLEGLDSLTSLTELYLS 249
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
GNQ GL L +L L L I ++G+ TS
Sbjct: 250 GNQIAKLEGLNALTSLTELYLSGNQIAKLEGLNALTS 286
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +LT+L +L L G I ++GL L +L LDL N LEGL +LT+L L+LS
Sbjct: 170 GLDSLTSLTELYLSGNQIAKLEGLDHLTSLTRLDLRGNQI--AKLEGLDHLTSLTGLNLS 227
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
GNQ GL +L +L L L I ++G+ TS
Sbjct: 228 GNQIRKLEGLDSLTSLTELYLSGNQIAKLEGLNALTS 264
Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 52/126 (41%), Gaps = 13/126 (10%)
Query: 9 VLDLSANYNITSGSLTRLGLANLT-----------NLKKLDLDGCGITTIQGLAKLKNLE 57
+LD+ YNI L+ G + + +L L C I L L+
Sbjct: 9 ILDIEKTYNIDIPDLSLQGEIDWWVDRYFKQDSSGAVVELRLRSCHIDGKAWLVDFPALK 68
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQG 117
LDLS N EGL +L +L LDLSGNQ GL L +L LDL I +G
Sbjct: 69 KLDLSYNQI--RKFEGLDHLASLTELDLSGNQIAKLEGLNALTSLTRLDLSYNQIRKFEG 126
Query: 118 IQQFTS 123
+ S
Sbjct: 127 LDHLAS 132
>gi|284800621|ref|YP_003412486.1| hypothetical protein LM5578_0368 [Listeria monocytogenes 08-5578]
gi|284993807|ref|YP_003415575.1| hypothetical protein LM5923_0367 [Listeria monocytogenes 08-5923]
gi|284056183|gb|ADB67124.1| hypothetical protein LM5578_0368 [Listeria monocytogenes 08-5578]
gi|284059274|gb|ADB70213.1| hypothetical protein LM5923_0367 [Listeria monocytogenes 08-5923]
Length = 1778
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ L LS N N+T+ + + +L LK L LDGCGIT+I L L LE LD
Sbjct: 385 LNNLPKLQTLVLSDNENLTNIT----AITDLPQLKTLTLDGCGITSIGTLDNLPKLEKLD 440
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
L N S+ + +L L LD+S N NLTT+G L LP L+ L++ ++ + +
Sbjct: 441 LKENQIT--SISEITDLPRLSYLDVSVN-NLTTIGDLKKLPLLEWLNVSSNRLSDVSTLT 497
Query: 120 QFTS 123
F S
Sbjct: 498 NFPS 501
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L NL L+L I+ + L L NL +L+LSSN L L G+ +L NLQ L++S
Sbjct: 177 GLQYLENLTSLNLSENNISDLAPLKDLVNLVSLNLSSNRTLVN-LSGVEDLVNLQELNVS 235
Query: 87 GNQNLTTLG-LANLPNLKTLDLRDCGITTIQ 116
N+ L + +A+LP LK + + C I T++
Sbjct: 236 ANKALEDISQVASLPVLKEISAQGCNIKTLE 266
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Query: 7 LQVLDLSANY---NITSGSLTRLGLANLTNLKKLDL-DGCGITTIQGLAKLKNLEALDLS 62
L++LDL NY T G+L+ L++LTNL +L+L + I I GL+ L L L+L
Sbjct: 658 LRILDLQNNYLNYTGTEGNLS--SLSDLTNLTELNLRNNVYIDDISGLSTLSRLIYLNLD 715
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
SN + L+NLTNLQ L L N+ L++L NL L + I I +
Sbjct: 716 SNKI--EDISALSNLTNLQELTLENNKIENISALSDLENLNKLVVSKNKIIDISPV 769
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L N L +++S N T G +T L +LK+ I+ I + + NL +D
Sbjct: 496 LTNFPSLNYINISNNVIRTVGKMTELP-----SLKEFYAQNNSISDISMIHDMPNLRKVD 550
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
S+N L ++ NL LQ LD+ N+ +T + +LP+L+T + + IT I
Sbjct: 551 ASNN--LITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITNI 603
>gi|386042670|ref|YP_005961475.1| internalin [Listeria monocytogenes 10403S]
gi|404409572|ref|YP_006695160.1| internalin I [Listeria monocytogenes SLCC5850]
gi|345535904|gb|AEO05344.1| internalin [Listeria monocytogenes 10403S]
gi|404229398|emb|CBY50802.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC5850]
Length = 1778
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ L LS N N+T+ + + +L LK L LDGCGIT+I L L LE LD
Sbjct: 385 LNNLPKLQTLVLSDNENLTNIT----AITDLPQLKTLTLDGCGITSIGTLDNLPKLEKLD 440
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
L N S+ + +L L LD+S N NLTT+G L LP L+ L++ ++ + +
Sbjct: 441 LKENQIT--SISEITDLPRLSYLDVSVN-NLTTIGDLKKLPLLEWLNVSSNRLSDVSTLT 497
Query: 120 QFTS 123
F S
Sbjct: 498 NFPS 501
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L NL L+L I+ + L L NL +L+LSSN L L G+ +L NLQ L++S
Sbjct: 177 GLQYLENLTSLNLSENNISDLAPLKDLVNLVSLNLSSNRTLVN-LSGVEDLVNLQELNVS 235
Query: 87 GNQNLTTLG-LANLPNLKTLDLRDCGITTIQ 116
N+ L + +A+LP LK + + C I T++
Sbjct: 236 ANKALEDISQVASLPVLKEISAQGCNIKTLE 266
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Query: 7 LQVLDLSANY---NITSGSLTRLGLANLTNLKKLDL-DGCGITTIQGLAKLKNLEALDLS 62
L++LDL NY T G+L+ L++LTNL +L+L + I I GL+ L L L+L
Sbjct: 658 LRILDLQNNYLNYTGTEGNLS--SLSDLTNLTELNLRNNVYIDDISGLSTLSRLIYLNLD 715
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
SN + L+NLTNLQ L L N+ L++L NL L + I I +
Sbjct: 716 SNKI--EDISALSNLTNLQELTLENNKIENISALSDLENLNKLVVSKNKIIDISPV 769
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L N L +++S N T G +T L +LK+ I+ I + + NL +D
Sbjct: 496 LTNFPSLNYINISNNVIRTVGKMTELP-----SLKEFYAQNNSISDISMIHDMPNLRKVD 550
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
S+N L ++ NL LQ LD+ N+ +T + +LP+L+T + + IT I
Sbjct: 551 ASNN--LITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQANLITNI 603
>gi|342320239|gb|EGU12181.1| Leucine repeat containing protein, putative [Rhodotorula glutinis
ATCC 204091]
Length = 1917
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
++LR L+ LDLS N + L A L +L++L DG I++I+GLA+L +L L
Sbjct: 1520 FSHLRNLERLDLSNNQLESVHQL-----ACLKHLRELKADGNEISSIEGLAQLDSLVRLS 1574
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQ 116
L SN LH G T L+ L L+ NQ + GL +L +L TL+L +T I+
Sbjct: 1575 LKSN-RLHSVDFGKTKWTRLETLHLARNQIVALHGLEHLVSLTTLNLEHNALTAIE 1629
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
L L +++L+ I+ + G+ L L +SSN SL ++L NL+ LDLS NQ
Sbjct: 1481 LPKLDEVNLNENDISYLTGIPS--TLRTLLVSSNRLT--SLASFSHLRNLERLDLSNNQL 1536
Query: 91 LTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
+ LA L +L+ L I++I+G+ Q S
Sbjct: 1537 ESVHQLACLKHLRELKADGNEISSIEGLAQLDS 1569
>gi|289433761|ref|YP_003463633.1| hypothetical protein lse_0394 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289170005|emb|CBH26545.1| leucine-rich repeat, cell wall anchor family protein [Listeria
seeligeri serovar 1/2b str. SLCC3954]
Length = 1770
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 63/124 (50%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ L LS N N+T + +L LK + LDGCGIT I L L LE LD
Sbjct: 373 LENLPKLQTLILSGNENLTDVD----AINDLPQLKTVALDGCGITNIGTLENLPKLEKLD 428
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
+ N + + +L L LD S NQ LTT+G LA LP L L++ + + + I
Sbjct: 429 IKGNKVTD--ISEITDLPRLSYLDASENQ-LTTIGTLAKLPLLDWLNISENQLKDVSTIN 485
Query: 120 QFTS 123
F S
Sbjct: 486 NFPS 489
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL-DLSSNYYLHGSLEGLANLTNLQVLDLS 86
++ +T L+ + L GC + ++ + LKNL L ++++N + L L NL LQ L LS
Sbjct: 328 ISGITTLEMIQLSGC--SKLKEITDLKNLPNLTNITANNCIIEDLGTLENLPKLQTLILS 385
Query: 87 GNQNLTTLGLAN-LPNLKTLDLRDCGITTI 115
GN+NLT + N LP LKT+ L CGIT I
Sbjct: 386 GNENLTDVDAINDLPQLKTVALDGCGITNI 415
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G L N+ +DL +T I L L + L+LSSN L L G+ LTNLQ L++S
Sbjct: 165 GFQYLENVTSVDLSENNLTDITPLTDLTKIVTLNLSSNQNLE-DLNGVEGLTNLQDLNVS 223
Query: 87 GNQNLTTLG-LANLPNLKTLDLRDCGITTIQ 116
++L + +A LP LK + + C I T++
Sbjct: 224 TCKSLADISPVAALPALKEISAQGCNIQTLE 254
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 13 SANY-NITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGS 70
S NY N+++ S+T G + L +LK+ +T I + + NL L++S+N L +
Sbjct: 489 SLNYINVSNNSITTFGKMTELPSLKEFYGQFNKVTDISMIHDMPNLRKLNVSNN--LINN 546
Query: 71 LEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L NL LQ LD+ N+ T + + P+L+T D I+T+
Sbjct: 547 LGTFENLPKLQNLDIHSNKITNTTVIHDFPSLETYDASSNLISTL 591
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 46 TIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
T+ + L NL L + NYY+ L GL++LTNL+ L L N+ L+NL L+ L
Sbjct: 664 TLSAFSDLTNLIELSMKDNYYIV-DLSGLSSLTNLRYLYLDNNRIEDVTPLSNLTELREL 722
Query: 106 DLRDCGITTIQGIQQFTS 123
L G IQ I +S
Sbjct: 723 TL---GTNKIQDISALSS 737
>gi|290975674|ref|XP_002670567.1| predicted protein [Naegleria gruberi]
gi|284084127|gb|EFC37823.1| predicted protein [Naegleria gruberi]
Length = 430
Score = 57.8 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 47/114 (41%), Positives = 60/114 (52%), Gaps = 14/114 (12%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L LR L+ L++S N ITS + L+NL L+KLD+ I+ + GL LK L L
Sbjct: 270 LTKLRKLEKLNISDNPCITS-----IDLSNLVRLRKLDISSTMISKLTGLNDLKELRKLK 324
Query: 61 LSSNYYLHGSLEGLA-----NLTNLQVLDLSGNQ----NLTTLGLANLPNLKTL 105
LS+N L SLE L NL L+ LD+S N+ L L ANLP L T
Sbjct: 325 LSNNIELFNSLEFLEFMPSINLPKLKHLDMSKNRLESCKLMPLTKANLPELTTF 378
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
++NL L++L+L I+ I L KL+ LE L++S N + S++ L+NL L+ LD+S
Sbjct: 249 ISNLKELRQLNLSLTVISQIP-LTKLRKLEKLNISDNPCI-TSID-LSNLVRLRKLDISS 305
Query: 88 NQNLTTLGLANLPNLKTLDLRD 109
GL +L L+ L L +
Sbjct: 306 TMISKLTGLNDLKELRKLKLSN 327
>gi|311978162|ref|YP_003987282.1| putative F-box/LRR-repeat protein [Acanthamoeba polyphaga
mimivirus]
gi|81999764|sp|Q5UP09.1|YR753_MIMIV RecName: Full=Putative F-box/LRR-repeat protein R753
gi|55417363|gb|AAV51013.1| unknown [Acanthamoeba polyphaga mimivirus]
gi|308205032|gb|ADO18833.1| putative F-box/LRR-repeat protein [Acanthamoeba polyphaga
mimivirus]
gi|339061692|gb|AEJ34996.1| hypothetical protein MIMI_R753 [Acanthamoeba polyphaga mimivirus]
Length = 751
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL N++KLDL C T + L+ L N+E ++L S Y + + GL L+N++ ++LS
Sbjct: 53 GLNMFANVRKLDLQECRCITNESLSALTNIETINLRSCYRITDN--GLEYLSNIKEINLS 110
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
G +T GL NL +D+ +C T++GI +F
Sbjct: 111 GCYEITDSGLRNLNKAVFVDISNCPQITVKGIVKF 145
>gi|351737928|gb|AEQ60963.1| hypothetical protein [Acanthamoeba castellanii mamavirus]
gi|398257552|gb|EJN41160.1| hypothetical protein lvs_R657 [Acanthamoeba polyphaga
lentillevirus]
Length = 751
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL N++KLDL C T + L+ L N+E ++L S Y + + GL L+N++ ++LS
Sbjct: 53 GLNMFANVRKLDLQECRCITNESLSALTNIETINLRSCYRITDN--GLEYLSNIKEINLS 110
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
G +T GL NL +D+ +C T++GI +F
Sbjct: 111 GCYEITDSGLRNLNKAVFVDISNCPQITVKGIVKF 145
>gi|18413552|emb|CAD21884.1| ESAG8 [Trypanosoma brucei]
gi|189094626|emb|CAQ57286.1| expression site-associated gene 8 (ESAG8) protein [Trypanosoma
brucei brucei]
Length = 630
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQGLAKLKNLEAL 59
+A +R L+ L LS +N+T G L L++L++LD+ GC + + L L NL+ L
Sbjct: 273 IAVVRSLEKLSLSGCWNVTKGLEE---LCKLSSLRELDISGCPVLGSAVVLRNLINLKVL 329
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
+S N L GL L NL+ L+LSG +++LG +ANL NLK LD+ C + G
Sbjct: 330 SVS-NCKNFKDLNGLERLVNLEKLNLSGCHGVSSLGFVANLSNLKELDISGCESLVCFDG 388
Query: 118 IQ 119
+Q
Sbjct: 389 LQ 390
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGC-GITTIQGLAKLKNLEA 58
L L L+ L+LS + ++S LG +ANL+NLK+LD+ GC + GL L NLE
Sbjct: 343 LERLVNLEKLNLSGCHGVSS-----LGFVANLSNLKELDISGCESLVCFDGLQDLNNLEV 397
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCG 111
L L + ++ + NL+ ++ LDLSG + +T+L GL L L+ L L CG
Sbjct: 398 LYL-RDVKSFTNVGAIKNLSKMRELDLSGCERITSLSGLETLKRLEELSLEGCG 450
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
+ NLR + VL+LS N+ S GL LT L++L L GC ITTI + L+NL+ L
Sbjct: 504 IWNLRNVCVLELSCCENLEDLS----GLQCLTGLEELYLIGCEEITTIGIVGNLRNLKCL 559
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT---LGLANLPNLK 103
L L GL L NL+ +DLSG L++ + L +LP L+
Sbjct: 560 STCWCANLK-ELGGLERLVNLEKVDLSGCCGLSSSVFMELMSLPKLQ 605
>gi|189094755|emb|CAQ57433.1| expression site-associated gene 8 (ESAG8) protein [Trypanosoma
brucei brucei]
Length = 630
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQGLAKLKNLEAL 59
+A +R L+ L LS +N+T G L L++L++LD+ GC + + L L NL+ L
Sbjct: 273 IAVVRSLEKLSLSGCWNVTKGLEE---LCKLSSLRELDISGCPVLGSAVVLRNLINLKVL 329
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
+S N L GL L NL+ L+LSG +++LG +ANL NLK LD+ C + G
Sbjct: 330 SVS-NCKNFKDLNGLERLVNLEKLNLSGCHGVSSLGFVANLSNLKELDISGCESLVCFDG 388
Query: 118 IQ 119
+Q
Sbjct: 389 LQ 390
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGC-GITTIQGLAKLKNLEA 58
L L L+ L+LS + ++S LG +ANL+NLK+LD+ GC + GL L NLE
Sbjct: 343 LERLVNLEKLNLSGCHGVSS-----LGFVANLSNLKELDISGCESLVCFDGLQDLNNLEV 397
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCG 111
L L + ++ + NL+ ++ LDLSG + +T+L GL L L+ L L CG
Sbjct: 398 LYL-RDVKSFTNVGAIKNLSKMRELDLSGCERITSLSGLETLKRLEELSLEGCG 450
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
+ NLR + VL+LS N+ S GL LT L++L L GC ITTI + L+NL+ L
Sbjct: 504 IWNLRNVCVLELSCCENLEDLS----GLQCLTGLEELYLIGCEEITTIGIVGNLRNLKCL 559
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT---LGLANLPNLK 103
L L GL L NL+ LDLSG L++ + L +LP L+
Sbjct: 560 STCWCANLK-ELGGLERLVNLEKLDLSGCCGLSSSVFMELMSLPKLQ 605
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 62/135 (45%), Gaps = 30/135 (22%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG-LAKLKNLEAL 59
+ +L +L+VL +S N+ S GL LT L++L L GC TI G + L+N+ L
Sbjct: 458 IWSLHHLRVLYVSECGNLEDLS----GLQCLTGLEELYLHGCRKCTIFGPIWNLRNVCVL 513
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG------------------------ 95
+LS L L GL LT L+ L L G + +TT+G
Sbjct: 514 ELSCCENLE-DLSGLQCLTGLEELYLIGCEEITTIGIVGNLRNLKCLSTCWCANLKELGG 572
Query: 96 LANLPNLKTLDLRDC 110
L L NL+ LDL C
Sbjct: 573 LERLVNLEKLDLSGC 587
>gi|366047663|gb|AEX08456.1| expression site-associated protein 8 [Trypanosoma brucei gambiense]
Length = 576
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 7/126 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQGLAKLKNLEAL 59
+A +R L+ L LS +N+T G L +NL+KLD+ GC + + L L NL+ L
Sbjct: 265 IAGVRSLEKLSLSGCWNVTKGLEE---LCKFSNLRKLDISGCLVLGSAVVLKNLINLKVL 321
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
+S N L GL L NL+ L+LSG +++LG +ANL NLK LD+ C + G
Sbjct: 322 SVS-NCKNFKDLNGLEILVNLEKLNLSGCHGVSSLGFVANLSNLKELDISGCESLVCFDG 380
Query: 118 IQQFTS 123
+Q +
Sbjct: 381 LQDLNN 386
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 7/107 (6%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEALDLSSNY 65
L+ L+LS + ++S +ANL+NLK+LD+ GC + GL L NLE L L +
Sbjct: 341 LEKLNLSGCHGVSSLGF----VANLSNLKELDISGCESLVCFDGLQDLNNLEVLYL-RDV 395
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCG 111
++ + NL+ ++ LDLSG + +T+L GL L L+ L L CG
Sbjct: 396 KSFTNVGAIKNLSKMRELDLSGCERITSLSGLETLKRLEELSLEGCG 442
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 45/133 (33%), Positives = 65/133 (48%), Gaps = 23/133 (17%)
Query: 1 LANLRYLQVLDLSANYNITSG--------SLTRLGL--ANLTN-----------LKKLDL 39
L L+ L+ L L + NIT G L L L N+T+ LK LD+
Sbjct: 194 LCRLKTLEALSLDSCINITKGFDKICALPQLMSLSLYQTNITDKDLRCIHPDGKLKVLDI 253
Query: 40 DGCG-ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL-TTLGLA 97
C IT + +A +++LE L LS + + LE L +NL+ LD+SG L + + L
Sbjct: 254 SSCHEITDLTAIAGVRSLEKLSLSGCWNVTKGLEELCKFSNLRKLDISGCLVLGSAVVLK 313
Query: 98 NLPNLKTLDLRDC 110
NL NLK L + +C
Sbjct: 314 NLINLKVLSVSNC 326
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEALDL 61
+L +L+VL +S N+ S GL LT L++L L GC ITTI + L+NL+ L
Sbjct: 452 SLHHLRVLYVSECGNLEDLS----GLQRLTGLEELYLIGCEEITTIGVVGNLRNLKYLST 507
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT---LGLANLPNLK 103
L L GL L NL+ +DLSG L++ + L +LP L+
Sbjct: 508 CWCANLK-ELGGLERLVNLEKVDLSGCCGLSSSVFMELMSLPKLQ 551
>gi|10396|emb|CAA39448.1| ESAG 8 [Trypanosoma brucei]
Length = 630
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI-TTIQGLAKLKNLEAL 59
+ +R L+ L LS +N+T G L +NL++LD+ GC + + L L NL+ L
Sbjct: 273 IGGVRSLEKLSLSGCWNVTKGLEE---LCKFSNLRELDISGCPVLGSAVVLRNLINLKVL 329
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
+S N L GL L NL+ L+LSG +++LG +ANL NLK LD+ C + G
Sbjct: 330 SVS-NCKNFKDLNGLERLVNLEKLNLSGCHGVSSLGFVANLSNLKELDISGCESLVCFDG 388
Query: 118 IQ 119
+Q
Sbjct: 389 LQ 390
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGC-GITTIQGLAKLKNLEA 58
L L L+ L+LS + ++S LG +ANL+NLK+LD+ GC + GL L NLE
Sbjct: 343 LERLVNLEKLNLSGCHGVSS-----LGFVANLSNLKELDISGCESLVCFDGLQDLNNLEV 397
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCG 111
L L + ++ + NL+ ++ LDLSG + +T+L GL +L L+ L L CG
Sbjct: 398 LYL-RDVKSFTNVGAIKNLSKMRELDLSGCERITSLSGLESLKGLEELSLEGCG 450
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 65/133 (48%), Gaps = 23/133 (17%)
Query: 1 LANLRYLQVLDLSANYNITSG--------SLTRLGLA--NLTN-----------LKKLDL 39
L L+ L+ L L + NIT G LT L L N+T+ LK LD+
Sbjct: 202 LCRLKTLEALSLDSCINITKGFDKICALPQLTSLSLCQTNVTDKDLRCIHPDGKLKVLDI 261
Query: 40 DGCG-ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL-TTLGLA 97
C IT + + +++LE L LS + + LE L +NL+ LD+SG L + + L
Sbjct: 262 SSCHEITDLTAIGGVRSLEKLSLSGCWNVTKGLEELCKFSNLRELDISGCPVLGSAVVLR 321
Query: 98 NLPNLKTLDLRDC 110
NL NLK L + +C
Sbjct: 322 NLINLKVLSVSNC 334
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEALDLS 62
LR + VL+LS N+ S GL LT L++L L GC + I + L+NL+ L
Sbjct: 507 LRNVLVLELSCCENLEDLS----GLQCLTGLEELYLIGCEKLQPIGIVGNLRNLKCLSTC 562
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQNLTT---LGLANLPNLK 103
L L GL L NL+ +DLSG L++ + L +LP L+
Sbjct: 563 WCANLK-ELGGLERLVNLEKVDLSGCCGLSSSVFMELMSLPKLQ 605
>gi|260812954|ref|XP_002601185.1| hypothetical protein BRAFLDRAFT_214496 [Branchiostoma floridae]
gi|229286476|gb|EEN57197.1| hypothetical protein BRAFLDRAFT_214496 [Branchiostoma floridae]
Length = 871
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQ-GLAKLKNLEALDL 61
L ++ LDLS N I+ L L N+K L L GC I T+ + KL LE LD+
Sbjct: 48 KLSHVHSLDLSHNEQISLPD----ELCRLENIKVLRLRGCNIMTVPSAVLKLTQLEELDI 103
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSGN-QNLTTLGLANLPNLKTLDL 107
S NY +H +GL+ LTN++VL+L G + +L L L L+ LDL
Sbjct: 104 SGNYRIHLP-DGLSGLTNIRVLNLEGTGMGIVSLVLGRLTQLEWLDL 149
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 63/140 (45%), Gaps = 30/140 (21%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG-LAKLKNLEAL 59
L L L+ LDLS +N+ +G LTN+K LDL C + + + ++ LE L
Sbjct: 138 LGRLTQLEWLDLS--FNLLQTLPPEVG--QLTNVKHLDLSRCQLHILPPEVGRMTQLEWL 193
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ------------NLTTLGLANLP------- 100
DLS N L + LTNL+ L LS N NL LGL++ P
Sbjct: 194 DLSFN-PLQTLPPEVGQLTNLEWLGLSSNPLQTLPAEVGQLTNLEWLGLSSNPLQTLPAE 252
Query: 101 -----NLKTLDLRDCGITTI 115
N+K LD+ C + T+
Sbjct: 253 VGQLTNVKHLDMSRCQLRTL 272
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLA-KLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
++ L NL LDLD CG+ ++ + KL ++ +LDLS N + E L L N++VL L
Sbjct: 23 MSGLVNLTTLDLDNCGLESLPPVVLKLSHVHSLDLSHNEQISLPDE-LCRLENIKVLRLR 81
Query: 87 GNQNLTTLGLA--NLPNLKTLDL 107
G N+ T+ A L L+ LD+
Sbjct: 82 GC-NIMTVPSAVLKLTQLEELDI 103
>gi|386008059|ref|YP_005926337.1| leucine-rich repeat domain protein (LPXTG motif) [Listeria
monocytogenes L99]
gi|307570869|emb|CAR84048.1| leucine-rich repeat domain protein (LPXTG motif) [Listeria
monocytogenes L99]
Length = 621
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 71/126 (56%), Gaps = 12/126 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT--IQGLAKLKNLEA 58
L N+ LQ+ +++A+Y + +L NLK L ++G +T+ I L+ L NL +
Sbjct: 92 LKNVEVLQLDNINASYE---------PIKSLVNLKTLTINGKNVTSDKIPDLSGLSNLTS 142
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQG 117
L+++ + +L +N+ NL L++S N +T + L NLPNL+ L++ +C I +G
Sbjct: 143 LEVTQTSIDNAALSKFSNIPNLGKLNISENTGITKISNLENLPNLQELNVTNCQINDFRG 202
Query: 118 IQQFTS 123
I +F S
Sbjct: 203 IAEFPS 208
>gi|217964567|ref|YP_002350245.1| internalin like protein [Listeria monocytogenes HCC23]
gi|386026658|ref|YP_005947434.1| putative peptidoglycan bound protein (LPXTG motif) [Listeria
monocytogenes M7]
gi|217333837|gb|ACK39631.1| internalin like protein [Listeria monocytogenes HCC23]
gi|336023239|gb|AEH92376.1| putative peptidoglycan bound protein (LPXTG motif) [Listeria
monocytogenes M7]
Length = 604
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 71/126 (56%), Gaps = 12/126 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT--IQGLAKLKNLEA 58
L N+ LQ+ +++A+Y + +L NLK L ++G +T+ I L+ L NL +
Sbjct: 75 LKNVEVLQLDNINASYE---------PIKSLVNLKTLTINGKNVTSDKIPDLSGLSNLTS 125
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQG 117
L+++ + +L +N+ NL L++S N +T + L NLPNL+ L++ +C I +G
Sbjct: 126 LEVTQTSIDNAALSKFSNIPNLGKLNISENTGITKISNLENLPNLQELNVTNCQINDFRG 185
Query: 118 IQQFTS 123
I +F S
Sbjct: 186 IAEFPS 191
>gi|168704644|ref|ZP_02736921.1| hypothetical protein GobsU_34225 [Gemmata obscuriglobus UQM 2246]
Length = 952
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
LANL L+ L+LS +G LANLT L+ L+L+GC G++ + LA L LE L
Sbjct: 743 LANLTGLRHLNLSG----CAGWADLSPLANLTGLRHLNLNGCTGVSDLSPLAPLTALEEL 798
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + L LANLT L+ LDLSG ++ L LA L+ LDL C G++ +
Sbjct: 799 DLSGCAGV-SDLSPLANLTALEGLDLSGCAGVSDLSPLAPHTALRFLDLSGCAGVSCLSP 857
Query: 118 IQQFTS 123
+ T+
Sbjct: 858 LAPHTA 863
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 49/112 (43%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
LANL L+ LDLS ++ S LA T L+ LDL GC G++ + LA L L
Sbjct: 812 LANLTALEGLDLSGCAGVSDLS----PLAPHTALRFLDLSGCAGVSCLSPLAPHTALRFL 867
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC 110
DLS + L LANLT L+ LDLSG ++ L LANL L+ LDL C
Sbjct: 868 DLSGCAGV-SDLSPLANLTALEDLDLSGCAGVSDLSPLANLTALEGLDLSGC 918
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 48/113 (42%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
LA L L+ LDLS ++ S LANLT L+ LDL GC G + LA L L L
Sbjct: 651 LAPLTALEELDLSGCAGVSDLS----PLANLTALRFLDLSGCAGGADLSPLANLTALRFL 706
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCG 111
DLS + L LANLT L+ L+L G ++ L LANL L+ L+L C
Sbjct: 707 DLSGCAGV-SDLAPLANLTALEGLNLRGCAGVSDLSPLANLTGLRHLNLSGCA 758
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 40/88 (45%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
LA L+ LDLS ++ S LANLT L+ LDL GC G++ + LA L LE L
Sbjct: 858 LAPHTALRFLDLSGCAGVSDLS----PLANLTALEDLDLSGCAGVSDLSPLANLTALEGL 913
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSG 87
DLS + L LA LT LQ LDL G
Sbjct: 914 DLSGCTGVL-DLSPLAPLTALQFLDLGG 940
>gi|443669794|ref|ZP_21134971.1| leucine Rich Repeat family protein [Microcystis aeruginosa
DIANCHI905]
gi|159030034|emb|CAO90415.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443329916|gb|ELS44687.1| leucine Rich Repeat family protein [Microcystis aeruginosa
DIANCHI905]
Length = 263
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 61/120 (50%), Gaps = 11/120 (9%)
Query: 8 QVLDLSANYNITSGSLTRL---------GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
Q++DL+ N+T+ + RL LANLTNL LDL I I LA L NLE
Sbjct: 86 QIVDLTPLANLTNLTELRLRQNQIVNVNALANLTNLTHLDLQTNQIIDITSLANLTNLEV 145
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L LS N L LAN TNL+ L L NQ + LANL NL+ L L D I + I
Sbjct: 146 LFLSDNKI--KDLTPLANFTNLRTLSLMDNQIVDVSPLANLNNLEVLFLSDNKIKDLTPI 203
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
LTNL+KL L I + LA L NL L L N ++ + LANLTNL LDL NQ
Sbjct: 74 LTNLQKLSLVNNQIVDLTPLANLTNLTELRLRQNQIVN--VNALANLTNLTHLDLQTNQI 131
Query: 91 LTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
+ LANL NL+ L L D I + + FT
Sbjct: 132 IDITSLANLTNLEVLFLSDNKIKDLTPLANFT 163
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L LDL N I SL ANLTNL+ L L I + LA NL L
Sbjct: 115 LANLTNLTHLDLQTNQIIDITSL-----ANLTNLEVLFLSDNKIKDLTPLANFTNLRTLS 169
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
L N + S LANL NL+VL LS N+
Sbjct: 170 LMDNQIVDVS--PLANLNNLEVLFLSDNK 196
>gi|260812958|ref|XP_002601187.1| hypothetical protein BRAFLDRAFT_75632 [Branchiostoma floridae]
gi|229286478|gb|EEN57199.1| hypothetical protein BRAFLDRAFT_75632 [Branchiostoma floridae]
Length = 1577
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 50/139 (35%), Positives = 67/139 (48%), Gaps = 28/139 (20%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
L L+ L+ LDLS N N+ + GL LTNLK L L GC + T+ + KL LE L
Sbjct: 42 LFELKDLEALDLSRNMNMELSN----GLIKLTNLKLLSLAGCNLATVPAAVMKLPQLETL 97
Query: 60 DLSS--NYYLHGSLEGLANLT--------------------NLQVLDLSGNQNLTTLG-L 96
LS+ N L + GL NLT +L+ LDLSGN+ ++ L
Sbjct: 98 ILSNNENITLPDDMSGLVNLTAIHLDWCNLDSLPPVVLKLSHLRSLDLSGNEQISLPDEL 157
Query: 97 ANLPNLKTLDLRDCGITTI 115
L N+K L L C + T+
Sbjct: 158 CRLENIKELRLYACFMATV 176
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLA-KLKNLEALDLS 62
L L+ L+LS N+ I GL+ LTN++ L L G G+ T+ +A +L LE L LS
Sbjct: 183 LTQLEKLNLSGNWGIHLPD----GLSRLTNIRVLILLGTGMDTVPSVAWRLTQLERLYLS 238
Query: 63 SNYYLHGSLEG-LANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGITTI 115
N +L + +LTN++ L LS Q L TL + L L+ LDL + T+
Sbjct: 239 LNPLQTSTLPAKVGHLTNIKHLHLSHCQ-LHTLPPEVGRLTQLEWLDLSSNPLQTL 293
>gi|343413823|emb|CCD21194.1| leucine-rich repeat protein, putative [Trypanosoma vivax Y486]
Length = 707
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 71/126 (56%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ L LS IT S L+ L++L+ LDL C GIT + L+KL +L L
Sbjct: 154 LSELSSLRTLGLSHCTGITDVS----PLSELSSLRTLDLSHCTGITDVSPLSKLSSLRTL 209
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L++L+ LDLS +T + L+ L +L+TLDL C GIT +
Sbjct: 210 DLSHCTGI-TDVSPLSKLSSLRTLDLSHCTGITDVSPLSKLSSLRTLDLSHCTGITDVSP 268
Query: 118 IQQFTS 123
+ + +S
Sbjct: 269 LSELSS 274
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ LDLS IT S L+ L++L LDL C GIT + L++L +L L
Sbjct: 476 LSELSSLRTLDLSHCTGITDVS----PLSELSSLCTLDLSHCTGITDVSPLSELSSLRTL 531
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ ++L LDLS +T + L+ L +L+ L+L C GIT +
Sbjct: 532 DLSHCTGI-TDVSPLSEFSSLHTLDLSHCTGITDVSPLSELSSLRMLNLSHCTGITDVSP 590
Query: 118 IQQFTS 123
+ +F+S
Sbjct: 591 LSEFSS 596
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L++L LS IT S L+ ++L+ LD C GIT + L+KL +L L
Sbjct: 384 LSELSGLRMLYLSHCTGITDVS----PLSVFSSLRMLDFSHCTGITDVSPLSKLSSLRTL 439
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L++L LDLS +T + L+ L +L+TLDL C GIT +
Sbjct: 440 DLSHCTGI-TDVSPLSELSSLHTLDLSHCTGITDVSPLSELSSLRTLDLSHCTGITDVSP 498
Query: 118 IQQFTS 123
+ + +S
Sbjct: 499 LSELSS 504
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ LDLS IT S L+ L++L L L C GIT + L+KL +L L
Sbjct: 85 LSKLSSLRTLDLSHCTGITDVS----PLSKLSSLHTLGLSHCTGITDVSPLSKLSSLHTL 140
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L++L+ L LS +T + L+ L +L+TLDL C GIT +
Sbjct: 141 DLSHCTGI-TDVSPLSELSSLRTLGLSHCTGITDVSPLSELSSLRTLDLSHCTGITDVSP 199
Query: 118 IQQFTS 123
+ + +S
Sbjct: 200 LSKLSS 205
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ LDLS IT S L+ L++L+ L L C GIT + L++L +L L
Sbjct: 246 LSKLSSLRTLDLSHCTGITDVS----PLSELSSLRTLGLSHCTGITDVSPLSELSSLRTL 301
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L++L+ LDLS +T + L+ L +L+TL C GIT +
Sbjct: 302 DLSHCTGI-TDVSPLSELSSLRTLDLSHCTGITDVSPLSKLSSLRTLYFLYCTGITDVSP 360
Query: 118 IQQFTS 123
+ + +S
Sbjct: 361 LSELSS 366
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 28 LANLTNLKKLDLDGC-GITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L+ ++L+ L L C GIT + L+KL +L LDLS + + L+ ++L+ LDLS
Sbjct: 16 LSVFSSLRMLYLSHCTGITDVSPLSKLSSLRTLDLSHCTGI-TDVSPLSVFSSLEKLDLS 74
Query: 87 GNQNLTTLG-LANLPNLKTLDLRDC-GITTIQGIQQFTS 123
+T + L+ L +L+TLDL C GIT + + + +S
Sbjct: 75 HCTGITDVSPLSKLSSLRTLDLSHCTGITDVSPLSKLSS 113
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L LDLS IT S L+ L++L+ L+L C GIT + L++ +L L
Sbjct: 545 LSEFSSLHTLDLSHCTGITDVS----PLSELSSLRMLNLSHCTGITDVSPLSEFSSLHTL 600
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTI 115
DLS + + L+ L++L +L LS +T + L + + L L +C GIT +
Sbjct: 601 DLSHCTGI-TDVSPLSKLSSLHILGLSHCTGITDVSPLTTIIGFEKLYLSNCTGITDV 657
>gi|391342555|ref|XP_003745583.1| PREDICTED: acidic leucine-rich nuclear phosphoprotein 32 family
member A-like [Metaseiulus occidentalis]
Length = 243
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYL 67
+V+DL+ + N S S+ L ++L NL+ L L+ G+T+++G KL LE L+LS N +
Sbjct: 16 KVVDLNLD-NARSTSIVGL-TSDLVNLRTLSLNSVGLTSLKGFPKLPKLERLELSDN-RI 72
Query: 68 HGSLEGLANLTNLQVLDLSGN--QNLTTL-GLANLPNLKTLDLRDCGITTIQGIQQ 120
G L+ L L+LS N ++L T+ LA L L+ LDL +CG+T+++G ++
Sbjct: 73 SGGLQAFHGSPLLTHLNLSNNRIEDLETVKPLAELKQLRILDLFNCGVTSVEGYRE 128
>gi|46446910|ref|YP_008275.1| hypothetical protein pc1276 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400551|emb|CAF24000.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 667
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L +L LQ L+L++ Y T L L +L L+ LDL C T GLA L L AL
Sbjct: 454 LTSLVALQHLNLNSCYKFTDAGLAHL--TSLVALQHLDLSCCRNLTDAGLAHLAPLVALQ 511
Query: 60 --DLS-SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
DLS S+++ + L L +L LQ LDLS +NLT GLA+L + L+ LDL C
Sbjct: 512 HLDLSYSHHFTNAGLAHLTSLVALQHLDLSCCRNLTDAGLAHLTSLVALQHLDLSSCKKL 571
Query: 114 TIQGIQQFTS 123
T G++ T
Sbjct: 572 TDAGLEHLTP 581
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
LA L LQ LDLS +++ T+ L L +L L+ LDL C T GLA L +L AL
Sbjct: 504 LAPLVALQHLDLSYSHHFTNAGLAHL--TSLVALQHLDLSCCRNLTDAGLAHLTSLVALQ 561
Query: 60 --DLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
DLSS L LE L L LQ LDLS + LT GLA+L L+ LDL C
Sbjct: 562 HLDLSSCKKLTDAGLEHLTPLVALQHLDLSSCKKLTDAGLAHLAPLVALQHLDLSSCKKL 621
Query: 114 TIQGIQQ 120
T G+
Sbjct: 622 TDAGLAH 628
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L +L LQ LDLS N+T L L +L L+ LDL C T GL L L AL
Sbjct: 529 LTSLVALQHLDLSCCRNLTDAGLAHL--TSLVALQHLDLSSCKKLTDAGLEHLTPLVALQ 586
Query: 60 --DLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
DLSS L L LA L LQ LDLS + LT GLA+L L+ L+L C
Sbjct: 587 HLDLSSCKKLTDAGLAHLAPLVALQHLDLSSCKKLTDAGLAHLAPLVALQHLNLNWCDKL 646
Query: 114 TIQGIQQFTS 123
T G+ F S
Sbjct: 647 TDAGVAHFKS 656
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 66/130 (50%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L +L LQ LDLS N+T LT L L L L+L C T GLA L +L AL
Sbjct: 354 LTSLVALQHLDLSCCRNLTDAGLTHLR--PLVALTHLNLAKCHKITDAGLAHLTSLVALQ 411
Query: 60 DLSSNYYLHGSLEGLANLTNL---QVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
L +Y + GLA+LT L Q LDLS + + T GLA+L + L+ L+L C
Sbjct: 412 HLDLSYCEKLTDAGLAHLTPLVALQHLDLSYSHHFTNAGLAHLTSLVALQHLNLNSCYKF 471
Query: 114 TIQGIQQFTS 123
T G+ TS
Sbjct: 472 TDAGLAHLTS 481
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 68/132 (51%), Gaps = 13/132 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
LA+L LQ L+L+ + IT L L +L L+ LDL C T GL L+ L AL
Sbjct: 329 LASLMALQHLNLAKCHKITDAGLAHL--TSLVALQHLDLSCCRNLTDAGLTHLRPLVALT 386
Query: 60 --DLSSNYYLHGSLEGLANLTNL---QVLDLSGNQNLTTLGLANLPN---LKTLDLRDCG 111
+L+ + + + GLA+LT+L Q LDLS + LT GLA+L L+ LDL
Sbjct: 387 HLNLAKCHKITDA--GLAHLTSLVALQHLDLSYCEKLTDAGLAHLTPLVALQHLDLSYSH 444
Query: 112 ITTIQGIQQFTS 123
T G+ TS
Sbjct: 445 HFTNAGLAHLTS 456
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA---LDLSS 63
++ L+ S N +T L L L N NLK L L C T GLA L +L A L+L+
Sbjct: 260 IERLNFSKNIFLTDAHL--LALKNCKNLKALHLQECDKLTDAGLAHLASLMALQHLNLNG 317
Query: 64 NYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQGI 118
+ L L LA+L LQ L+L+ +T GLA+L + L+ LDL C T G+
Sbjct: 318 CWELTDAGLAHLASLMALQHLNLAKCHKITDAGLAHLTSLVALQHLDLSCCRNLTDAGL 376
>gi|255724430|ref|XP_002547144.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135035|gb|EER34589.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 359
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 20 SGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLT 78
S +++L GL L NLK L + GI+ I+ L KLKNLE L L+SN +EGL NL
Sbjct: 215 SNRISKLEGLDTLVNLKVLSIQSNGISKIENLDKLKNLEELYLTSNRL--SEIEGLENLE 272
Query: 79 NLQVLDLSGNQ 89
NLQ+LDLS N+
Sbjct: 273 NLQILDLSHNK 283
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+ NLT L+ L+L I I+ L NL++L L SN LEGL L NL+VL +
Sbjct: 179 NIENLTKLRMLELGANKIERIENLEPFINLQSLFLGSNRI--SKLEGLDTLVNLKVLSIQ 236
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
N L L NL+ L L ++ I+G++
Sbjct: 237 SNGISKIENLDKLKNLEELYLTSNRLSEIEGLE 269
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 11/99 (11%)
Query: 18 ITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY-LHGSLEGLA 75
+TS L+ + GL NL NL+ LDL I+ + L L+ LE L +SSN ++ L+
Sbjct: 257 LTSNRLSEIEGLENLENLQILDLSHNKISKLDNLGHLQKLEDLWISSNLIDSFNEVDKLS 316
Query: 76 NLTNLQVLDLSGN----QNLTT----LGLANLPNLKTLD 106
L +L+ + L N +N T+ + LA LPNLK LD
Sbjct: 317 KLESLETVYLEHNPIQLKNATSYRRKVKLA-LPNLKKLD 354
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+ NL N+++L I I+ + L L L+L +N +E L NLQ L L
Sbjct: 157 NIENLINIEQLFFVQNKIKEIKNIENLTKLRMLELGANKI--ERIENLEPFINLQSLFLG 214
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
N+ GL L NLK L ++ GI+ I+ + +
Sbjct: 215 SNRISKLEGLDTLVNLKVLSIQSNGISKIENLDK 248
>gi|421110782|ref|ZP_15571273.1| leucine rich repeat protein [Leptospira santarosai str. JET]
gi|410803879|gb|EKS10006.1| leucine rich repeat protein [Leptospira santarosai str. JET]
Length = 473
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 72/137 (52%), Gaps = 24/137 (17%)
Query: 1 LANLRYLQVLDLSANY-----------------NITSGSLTRLG--LANLTNLKKLDLDG 41
+ NL+ LQ LDLS N N+ S LT L + NL NL+ LDL
Sbjct: 184 IGNLQKLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGR 243
Query: 42 CGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LAN 98
+TT+ + + L+NL+ LDL N L E + NL NLQ LDL GNQ L TL + N
Sbjct: 244 NQLTTLPEEIGNLQNLQTLDLEGNQ-LAALPEEIGNLQNLQTLDLEGNQ-LATLPEEIGN 301
Query: 99 LPNLKTLDLRDCGITTI 115
L NL+TLDL +TT+
Sbjct: 302 LQNLQTLDLEGNQLTTL 318
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 60/107 (56%), Gaps = 15/107 (14%)
Query: 16 YNITSGSLTRLGLANLTNLKKLDLD----GCGITTI-QGLAKLKNLEALDLSSNYYLHGS 70
YN+T L + T+++ LDL G +TT+ + + L+NL+ L+L+SN +
Sbjct: 128 YNLTEA------LQHPTDVRVLDLGPPEGGNQLTTLPKEIGNLQNLQTLNLNSNQFTTLP 181
Query: 71 LEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
E + NL LQ LDLS NQ LTTL + L NL+ L+L +TT+
Sbjct: 182 -EEIGNLQKLQKLDLSHNQ-LTTLPKEIGQLQNLQKLNLNSNQLTTL 226
>gi|189094775|emb|CAQ57457.1| expression site-associated gene 8 (ESAG8) protein [Trypanosoma
brucei brucei]
Length = 630
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI-TTIQGLAKLKNLEAL 59
+ +R L+ L LS +N+T G L L++L++LD+ GC + + L L NL+ L
Sbjct: 273 IGGVRSLEKLSLSGCWNVTKGLEE---LCKLSSLRELDISGCPVLGSAVVLRNLINLKVL 329
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
+S N L GL L NL+ L+LSG +++LG +ANL NLK LD+ C + G
Sbjct: 330 SVS-NCKNFKDLNGLERLVNLEKLNLSGCHGVSSLGFVANLSNLKELDISGCESLVCFDG 388
Query: 118 IQ 119
+Q
Sbjct: 389 LQ 390
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGC-GITTIQGLAKLKNLEA 58
L L L+ L+LS + ++S LG +ANL+NLK+LD+ GC + GL L NLE
Sbjct: 343 LERLVNLEKLNLSGCHGVSS-----LGFVANLSNLKELDISGCESLVCFDGLQDLNNLEV 397
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCG 111
L L + ++ + NL+ ++ LDLSG + +T+L GL L L+ L L CG
Sbjct: 398 LYL-RDVKSFTNVGAIKNLSKIRELDLSGCERITSLSGLETLKRLEELSLEGCG 450
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
+ NLR + VL+LS N+ S GL LT L++L L GC ITTI + L+NL+ L
Sbjct: 504 IWNLRNVCVLELSCCENLDDLS----GLHCLTGLEELYLIGCEEITTIGVVGNLRNLKCL 559
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT---LGLANLPNLK 103
L L GL L NL+ +DLSG L++ + L +LP L+
Sbjct: 560 STCWCANLK-ELGGLERLVNLEKVDLSGCCGLSSSVFMELMSLPKLQ 605
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L NLR L++ N S +GL L L L++DG G+T I GL +LK LEAL
Sbjct: 158 LRNLRKLRMKRTMVNDMWCSS----IGL--LKFLVHLEVDGSRGVTDITGLCRLKTLEAL 211
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANL-PN--LKTLDLRDC----GI 112
L S + + + L L L L N+T L + P+ LK LD+ C +
Sbjct: 212 SLDSCINITKGFDKICALPQLTSLSLC-QTNVTDKDLRCIHPDGKLKVLDISSCHEITDL 270
Query: 113 TTIQGIQQF 121
T I G++
Sbjct: 271 TAIGGVRSL 279
>gi|186681684|ref|YP_001864880.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
gi|186464136|gb|ACC79937.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
Length = 1185
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 64/114 (56%), Gaps = 13/114 (11%)
Query: 7 LQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSS 63
L VLDLS+N +T++ +A LTNLK L L IT I + LA L NL L LSS
Sbjct: 243 LTVLDLSSN------QITKIPEAIAQLTNLKLLYLSDNQITEIPEALANLTNLMQLHLSS 296
Query: 64 NYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGITTI 115
N E LANLTNL L LSGNQ +T + LANLPNL L L IT I
Sbjct: 297 NQITEIP-EALANLTNLTQLYLSGNQ-ITEIPEALANLPNLTRLYLYSNQITEI 348
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 59/104 (56%), Gaps = 7/104 (6%)
Query: 17 NITSGSLTRLG--LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEG 73
N++S +T++ +A LTNL L L G IT I + +A+L NL LDLS N E
Sbjct: 178 NLSSNQITQIPEVIAKLTNLTLLYLSGNQITEIPEAIAQLTNLTLLDLSDNKITEIP-EA 236
Query: 74 LANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGITTI 115
+ TNL VLDLS NQ +T + +A L NLK L L D IT I
Sbjct: 237 ITQSTNLTVLDLSSNQ-ITKIPEAIAQLTNLKLLYLSDNQITEI 279
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 65/143 (45%), Gaps = 30/143 (20%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
LANL L L LS+N IT LANLTNL +L L G IT I + LA L NL L
Sbjct: 283 LANLTNLMQLHLSSN-QITE---IPEALANLTNLTQLYLSGNQITEIPEALANLPNLTRL 338
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ---------NLTTL---------------G 95
L SN E LANLTNL L L NQ NLT L
Sbjct: 339 YLYSNQITEIP-EALANLTNLIQLVLFSNQIAEIPETLANLTNLIQLVLFSNQIAEIPET 397
Query: 96 LANLPNLKTLDLRDCGITTIQGI 118
LA L NL LDLR IT I +
Sbjct: 398 LAKLTNLTRLDLRFNQITQIPKV 420
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 63/115 (54%), Gaps = 17/115 (14%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTI-QGLAKLKNLE 57
LA L L LDL N +T++ +ANLTNL +L L IT I + LA L NL
Sbjct: 398 LAKLTNLTRLDLRFN------QITQIPKVIANLTNLTELHLSSNQITQIPEALANLTNLT 451
Query: 58 ALDLSSNYY--LHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLR 108
L SSN + G++ A LTNL LDLSGNQ +T + + +L L+ LDLR
Sbjct: 452 QLYFSSNQITQIPGAI---AKLTNLTQLDLSGNQ-ITEIPEAIESLSKLEKLDLR 502
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 57/122 (46%), Gaps = 27/122 (22%)
Query: 27 GLANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
+ANLTNL +L L IT I + +AKL NL L S N E +ANLTNL L+L
Sbjct: 121 AIANLTNLTQLILSYNQITQIPEAIAKLSNLTVLIFSDNKITQIP-EAIANLTNLTRLNL 179
Query: 86 SGNQ------------NLTTL------------GLANLPNLKTLDLRDCGITTI-QGIQQ 120
S NQ NLT L +A L NL LDL D IT I + I Q
Sbjct: 180 SSNQITQIPEVIAKLTNLTLLYLSGNQITEIPEAIAQLTNLTLLDLSDNKITEIPEAITQ 239
Query: 121 FT 122
T
Sbjct: 240 ST 241
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 50/91 (54%), Gaps = 10/91 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITTIQG-LAKLKNLE 57
+ANL L L LS+N +T++ LANLTNL +L IT I G +AKL NL
Sbjct: 421 IANLTNLTELHLSSN------QITQIPEALANLTNLTQLYFSSNQITQIPGAIAKLTNLT 474
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
LDLS N E + +L+ L+ LDL GN
Sbjct: 475 QLDLSGNQITEIP-EAIESLSKLEKLDLRGN 504
>gi|7321614|gb|AAA32117.2| leucine repeat protein [Trypanosoma brucei]
Length = 632
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC---GITTIQGLAKLKNLE 57
+ +R L+ L LS +N+T G L +NL++LD+ GC G + L L NL+
Sbjct: 273 IGGVRSLEKLSLSGCWNVTKGLEE---LCKFSNLRELDISGCLVLGSAVV--LKNLINLK 327
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTI 115
L +S N L GL L NL+ L+LSG +++LG +ANL NLK LD+ C +
Sbjct: 328 VLSVS-NCKNFKDLNGLERLVNLEKLNLSGCHGVSSLGFVANLSNLKELDISGCESLVCF 386
Query: 116 QGIQ 119
G+Q
Sbjct: 387 DGLQ 390
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGC-GITTIQGLAKLKNLEA 58
L L L+ L+LS + ++S LG +ANL+NLK+LD+ GC + GL L NLE
Sbjct: 343 LERLVNLEKLNLSGCHGVSS-----LGFVANLSNLKELDISGCESLVCFDGLQDLNNLEV 397
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCG 111
L L + ++ + NL+ ++ LDLSG + +T+L GL L L+ L L CG
Sbjct: 398 LYL-RDVKSFTNVGAIKNLSKMRELDLSGCERITSLSGLETLKGLEELSLEGCG 450
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
+ NLR + VL+LS N+ S GL LT L++L L GC ITTI + L+NL+ L
Sbjct: 504 IWNLRNVCVLELSCCENLDDLS----GLQCLTGLEELYLIGCEEITTIGVVGNLRNLKCL 559
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT---LGLANLPNLK 103
L L GL L NL+ LDLSG L++ + L +LP L+
Sbjct: 560 STCWCANLK-ELGGLERLVNLEKLDLSGCCGLSSSVFMELMSLPKLQ 605
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 23/133 (17%)
Query: 1 LANLRYLQVLDLSANYNITSG--------SLTRLGLA--NLTN-----------LKKLDL 39
L L+ L+ L L NIT G LT L L N+T+ LK LD+
Sbjct: 202 LFRLKTLEALSLDNCINITKGFDKICALPQLTSLSLCQTNVTDKDLRCIHPDGKLKMLDI 261
Query: 40 DGCG-ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL-TTLGLA 97
C IT + + +++LE L LS + + LE L +NL+ LD+SG L + + L
Sbjct: 262 SSCHEITDLTAIGGVRSLEKLSLSGCWNVTKGLEELCKFSNLRELDISGCLVLGSAVVLK 321
Query: 98 NLPNLKTLDLRDC 110
NL NLK L + +C
Sbjct: 322 NLINLKVLSVSNC 334
>gi|119565|sp|P23799.1|ESAG8_TRYBB RecName: Full=Putative adenylate cyclase regulatory protein;
AltName: Full=Leucine repeat protein; AltName: Full=VSG
expression site-associated protein F14.9
Length = 630
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 11/124 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC---GITTIQGLAKLKNLE 57
+ +R L+ L LS +N+T G L +NL++LD+ GC G + L L NL+
Sbjct: 273 IGGVRSLEKLSLSGCWNVTKGLEE---LCKFSNLRELDISGCLVLGSAVV--LKNLINLK 327
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTI 115
L +S N L GL L NL+ L+LSG +++LG +ANL NLK LD+ C +
Sbjct: 328 VLSVS-NCKNFKDLNGLERLVNLEKLNLSGCHGVSSLGFVANLSNLKELDISGCESLVCF 386
Query: 116 QGIQ 119
G+Q
Sbjct: 387 DGLQ 390
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGC-GITTIQGLAKLKNLEA 58
L L L+ L+LS + ++S LG +ANL+NLK+LD+ GC + GL L NLE
Sbjct: 343 LERLVNLEKLNLSGCHGVSS-----LGFVANLSNLKELDISGCESLVCFDGLQDLNNLEV 397
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCG 111
L L + ++ + NL+ ++ LDLSG + +T+L GL L L+ L L CG
Sbjct: 398 LYL-RDVKSFTNVGAIKNLSKMRELDLSGCERITSLSGLETLKGLEELSLEGCG 450
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
+ NLR + VL+LS N+ S GL LT L++L L GC ITTI + L+NL+ L
Sbjct: 504 IWNLRNVCVLELSCCENLDDLS----GLQCLTGLEELYLIGCEEITTIGVVGNLRNLKCL 559
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT---LGLANLPNLK 103
L L GL L NL+ LDLSG L++ + L +LP L+
Sbjct: 560 STCWCANLK-ELGGLERLVNLEKLDLSGCCGLSSSVFMELMSLPKLQ 605
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 23/133 (17%)
Query: 1 LANLRYLQVLDLSANYNITSG--------SLTRLGLA--NLTN-----------LKKLDL 39
L L+ L+ L L NIT G LT L L N+T+ LK LD+
Sbjct: 202 LFRLKTLEALSLDNCINITKGFDKICALPQLTSLSLCQTNVTDKDLRCIHPDGKLKMLDI 261
Query: 40 DGCG-ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL-TTLGLA 97
C IT + + +++LE L LS + + LE L +NL+ LD+SG L + + L
Sbjct: 262 SSCHEITDLTAIGGVRSLEKLSLSGCWNVTKGLEELCKFSNLRELDISGCLVLGSAVVLK 321
Query: 98 NLPNLKTLDLRDC 110
NL NLK L + +C
Sbjct: 322 NLINLKVLSVSNC 334
>gi|261333887|emb|CBH16882.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 676
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC---GITTIQGLAKLKNLE 57
+A +R L+ L LS +N+T G L +NL++LD+ GC G + L L NL+
Sbjct: 273 IAGVRSLEKLSLSGCWNVTKGLEE---LCKFSNLRELDISGCLVLGSAVV--LRNLINLK 327
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLA-NLPNLKTLDLRDC-GITTI 115
L +S N L GL L NL+ L+LSG +++LG NL NLK LD+ C +
Sbjct: 328 VLSVS-NCKNFKDLNGLERLVNLEKLNLSGCHGVSSLGFVENLSNLKELDISGCESLVCF 386
Query: 116 QGIQ 119
G+Q
Sbjct: 387 DGLQ 390
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 70/122 (57%), Gaps = 8/122 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L NL L+VL +S N + GL L NL+KL+L GC G++++ + L NL+ L
Sbjct: 320 LRNLINLKVLSVSNCKNFKDLN----GLERLVNLEKLNLSGCHGVSSLGFVENLSNLKEL 375
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCG-ITTIQG 117
D+S L +GL +L NL+VL L ++ T +G + NL ++ LDL C IT++ G
Sbjct: 376 DISGCESLV-CFDGLQDLNNLEVLYLRDVKSFTNVGAIKNLSKMRELDLSGCERITSLSG 434
Query: 118 IQ 119
++
Sbjct: 435 LE 436
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 66/133 (49%), Gaps = 23/133 (17%)
Query: 1 LANLRYLQVLDLSANYNITSG--------SLTRLGLA--NLTN-----------LKKLDL 39
L L+ L+ L L + NIT G LT L L N+T+ LK LD+
Sbjct: 202 LCRLKTLEALSLDSCINITKGFDKICALPQLTSLSLCQTNVTDKDLRCIHPDGKLKVLDI 261
Query: 40 DGCG-ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL-TTLGLA 97
C IT + +A +++LE L LS + + LE L +NL+ LD+SG L + + L
Sbjct: 262 SSCHEITDLTAIAGVRSLEKLSLSGCWNVTKGLEELCKFSNLRELDISGCLVLGSAVVLR 321
Query: 98 NLPNLKTLDLRDC 110
NL NLK L + +C
Sbjct: 322 NLINLKVLSVSNC 334
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
+ NL ++ LDLS ITS S GL L L++L L+GCG I + + L +L L
Sbjct: 412 IKNLSKMRELDLSGCERITSLS----GLETLKRLEELSLEGCGEIMSFDPIWSLHHLRVL 467
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCG-ITTIQG 117
+S L L GL +T L+ L L G + T G + +L L+ L + +CG + + G
Sbjct: 468 YVSECGNLE-DLSGLEGITGLEELYLHGCRKCTNFGPIWSLCKLRVLYVSECGNLEDLSG 526
Query: 118 IQQFT 122
++ T
Sbjct: 527 LEGIT 531
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 15/129 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDG-CGITTIQGLAKLKNLEAL 59
L NLR L++ N S +GL L L L++DG CG+T I GL +LK LEAL
Sbjct: 158 LRNLRKLRMKRTMVNDMWCSS----IGL--LKFLVHLEVDGSCGVTDITGLCRLKTLEAL 211
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANL-PN--LKTLDLRDC----GI 112
L S + + + L L L L N+T L + P+ LK LD+ C +
Sbjct: 212 SLDSCINITKGFDKICALPQLTSLSLC-QTNVTDKDLRCIHPDGKLKVLDISSCHEITDL 270
Query: 113 TTIQGIQQF 121
T I G++
Sbjct: 271 TAIAGVRSL 279
>gi|62466117|gb|AAX83388.1| Sds [Schistosoma mansoni]
Length = 327
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 21/127 (16%)
Query: 14 ANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH---- 68
AN +++ + R+ L NL+NL+KL I+ I+ L+ LK+LE L+L SN
Sbjct: 102 ANLDLSFNRIKRIENLENLSNLRKLYFVNNHISKIENLSNLKDLEMLELGSNKIRKLENL 161
Query: 69 ----------------GSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGI 112
++E L NLTNL +L + GN+ GLA+L NL+ L L + GI
Sbjct: 162 DELEKLTQLYCGKNKIPAIENLDNLTNLTILSIQGNRLTKINGLASLVNLEQLYLSENGI 221
Query: 113 TTIQGIQ 119
T I+G++
Sbjct: 222 TEIEGLE 228
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 18 ITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
I LT++ GLA+L NL++L L GIT I+GL L L+ LDL+ N+ ++ ++N
Sbjct: 194 IQGNRLTKINGLASLVNLEQLYLSENGITEIEGLETLSKLQILDLAYNFI--SQIQNMSN 251
Query: 77 LTNLQVLDLSGNQ--NLTTLG-LANLPNLKTL 105
L NL+ + N+ + LG L+ L L+TL
Sbjct: 252 LVNLEEFWCNDNKISDWEQLGKLSVLKKLRTL 283
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 58/121 (47%), Gaps = 13/121 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG---ITTIQGLAKLKNLE 57
L+NL+ L++L+L GS L NL L+KL CG I I+ L L NL
Sbjct: 139 LSNLKDLEMLEL--------GSNKIRKLENLDELEKLTQLYCGKNKIPAIENLDNLTNLT 190
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQG 117
L + N + GLA+L NL+ L LS N GL L L+ LDL I+ IQ
Sbjct: 191 ILSIQGNRL--TKINGLASLVNLEQLYLSENGITEIEGLETLSKLQILDLAYNFISQIQN 248
Query: 118 I 118
+
Sbjct: 249 M 249
>gi|344289170|ref|XP_003416318.1| PREDICTED: leucine-rich repeat-containing protein 31 [Loxodonta
africana]
Length = 592
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 74/135 (54%), Gaps = 22/135 (16%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGIT--TIQ----GLAK 52
L L+ L+VLDLS N NI SGSL R+ GL N +NLK L L CG++ +++
Sbjct: 262 LPMLQSLEVLDLSINRNI-SGSLNRIAQGLKNTSNLKVLKLHSCGLSQDSVKILDAAFRY 320
Query: 53 LKNLEALDLSSNYYLHGSLEG----LANLTNLQVLDL------SGNQNLTTLGLANLPNL 102
L +L LDLS N L G EG LA L +LQVLDL +G+ T + L NL
Sbjct: 321 LCDLRRLDLSCNKELGGGFEGSPAQLATLRHLQVLDLHQCSLTAGDVVSLTQVIPLLSNL 380
Query: 103 KTLDL---RDCGITT 114
+ LDL + GI++
Sbjct: 381 QELDLSANKKMGISS 395
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 27/121 (22%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITTIQG------LAK 52
L + L+ L+LS N + G+L + L + L+ L+L C +T+ G L
Sbjct: 206 LKAIPELEELNLSWNSKV-GGNLPLILQALQEGSKLQTLELVDCALTSEDGAFMGQLLPM 264
Query: 53 LKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGI 112
L++LE LDLS N + GSL +A GL N NLK L L CG+
Sbjct: 265 LQSLEVLDLSINRNISGSLNRIAQ------------------GLKNTSNLKVLKLHSCGL 306
Query: 113 T 113
+
Sbjct: 307 S 307
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 59/128 (46%), Gaps = 24/128 (18%)
Query: 2 ANLRYL---QVLDLSANYNITSG-SLTRLGLANLTNLKKLDLDGCGITT------IQGLA 51
A RYL + LDLS N + G + LA L +L+ LDL C +T Q +
Sbjct: 316 AAFRYLCDLRRLDLSCNKELGGGFEGSPAQLATLRHLQVLDLHQCSLTAGDVVSLTQVIP 375
Query: 52 KLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG----------NQNLTTLGLA--NL 99
L NL+ LDLS+N + S E L L+ L+ L N+ LT L A +L
Sbjct: 376 LLSNLQELDLSANKKMGISSENL--LSRLRFLPALKSLLINNCALENETLTALAEASVHL 433
Query: 100 PNLKTLDL 107
P L+ DL
Sbjct: 434 PGLEIFDL 441
>gi|168033675|ref|XP_001769340.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679446|gb|EDQ65894.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 524
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 66/117 (56%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCG--ITTIQGLAKLKNL 56
L NL +L+ L LS SLT L L NL++LK LDL+GC I+ LA L L
Sbjct: 110 LTNLSFLEELVLSG-----CSSLTSLPNELVNLSSLKMLDLNGCSNLISLPNELANLSFL 164
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCG 111
LDLS + L LANL++L+VL LSG +LT+L LANL +LK L L C
Sbjct: 165 TILDLSGCFSLISLPNELANLSSLEVLVLSGCSSLTSLPNELANLSSLKALYLIGCS 221
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 65/117 (55%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCG-ITTIQG-LAKLKNL 56
LANL L +LDLS SLT L LANL++L LDL GC +T++ LA L +L
Sbjct: 38 LANLSSLTILDLSG-----CSSLTSLPNELANLSSLTILDLSGCSSLTSLSNELANLSSL 92
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCG 111
LDLS L L NL+ L+ L LSG +LT+L L NL +LK LDL C
Sbjct: 93 TTLDLSGCSSLISLPNELTNLSFLEELVLSGCSSLTSLPNELVNLSSLKMLDLNGCS 149
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Query: 21 GSLTRLG--LANLTNLKKLDLDGC-GITTIQG-LAKLKNLEALDLSSNYYLHGSLEGLAN 76
SLT L L NL++L++L L C +T++ LA L +L LDLS L LAN
Sbjct: 5 SSLTSLPNELVNLSSLEELVLSDCLSLTSLPNELANLSSLTILDLSGCSSLTSLPNELAN 64
Query: 77 LTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCG 111
L++L +LDLSG +LT+L LANL +L TLDL C
Sbjct: 65 LSSLTILDLSGCSSLTSLSNELANLSSLTTLDLSGCS 101
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 66/136 (48%), Gaps = 25/136 (18%)
Query: 1 LANLRYLQVLDLSANYNITS--------GSLTRLGL-------------ANLTNLKKLDL 39
L NL L++LDL+ ++ S SLTRL L ANL+ L +L+L
Sbjct: 350 LTNLSSLKMLDLNGCSSLISLPNELTNLSSLTRLDLNGCSSLKSLPNELANLSYLTRLNL 409
Query: 40 DGCGITT--IQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-- 95
GC T LA L L LDLS L L NL+ L LDLSG +LT+L
Sbjct: 410 SGCSCLTSLPNELANLSFLTRLDLSGCSSLTSLPNELTNLSFLTTLDLSGCSSLTSLPNE 469
Query: 96 LANLPNLKTLDLRDCG 111
LANL +LK LDL C
Sbjct: 470 LANLSSLKMLDLNGCS 485
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQG-LAKLKNLEA 58
LANL YL L+LS +TS LANL+ L +LDL GC +T++ L L L
Sbjct: 398 LANLSYLTRLNLSGCSCLTS---LPNELANLSFLTRLDLSGCSSLTSLPNELTNLSFLTT 454
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDC 110
LDLS L LANL++L++LDL+G +L L LANL L L+L C
Sbjct: 455 LDLSGCSSLTSLPNELANLSSLKMLDLNGCSSLIILPNELANLSFLTRLNLSGC 508
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQG-LAKLKNLEA 58
L NL L+ L LS ++TS LANL++L LDL GC +T++ LA L +L
Sbjct: 14 LVNLSSLEELVLSDCLSLTS---LPNELANLSSLTILDLSGCSSLTSLPNELANLSSLTI 70
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCG 111
LDLS L LANL++L LDLSG +L +L L NL L+ L L C
Sbjct: 71 LDLSGCSSLTSLSNELANLSSLTTLDLSGCSSLISLPNELTNLSFLEELVLSGCS 125
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 64/111 (57%), Gaps = 11/111 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCG-ITTIQG-LAKLKNL 56
LANL L+ L Y I SLT L LANL++L++L L GC +T++ LA L +L
Sbjct: 206 LANLSSLKAL-----YLIGCSSLTSLPNELANLSSLEELVLSGCSSLTSLSNELANLSSL 260
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTL 105
L+LS + L LANL +L+ L LSG +LT+L L NL +L+ L
Sbjct: 261 RRLNLSGCFSLISLPNELANLYSLKFLVLSGCSSLTSLPNELVNLSSLEEL 311
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 63/117 (53%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDG-CGITTIQG-LAKLKNL 56
LANL L+ L LS SLT L L NL++L++L + G +TT+ L L +L
Sbjct: 278 LANLYSLKFLVLSG-----CSSLTSLPNELVNLSSLEELIMSGFSSLTTLPNELTNLSSL 332
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCG 111
E L LS L L NL++L++LDL+G +L +L L NL +L LDL C
Sbjct: 333 EELVLSGCSSLISLPNELTNLSSLKMLDLNGCSSLISLPNELTNLSSLTRLDLNGCS 389
>gi|444739192|dbj|BAM77406.1| clubroot disease resistance protein [Brassica rapa]
Length = 1224
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG--ITTIQGLAKLKNLEA 58
+ N+ L+ L+L+ SL L N+TNLK LD + C + + + NL
Sbjct: 805 IGNMTNLKELELNE-----CSSLVELTFGNMTNLKNLDPNRCSSLVEISSSIGNMTNLVR 859
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDC 110
LDL+ L + N+TNL+ L+LSG +L L + NL NLK L+LR+C
Sbjct: 860 LDLTGCSSLVELPYSIGNMTNLETLELSGCSSLVELPSSIGNLHNLKRLNLRNC 913
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Query: 15 NYNITS-GSLTRLG--LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSL 71
N+N++ S+ RL + N+TNLK+L+L+ C + NL+ LD + L
Sbjct: 789 NFNLSQCSSVVRLSFSIGNMTNLKELELNECSSLVELTFGNMTNLKNLDPNRCSSLVEIS 848
Query: 72 EGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDC 110
+ N+TNL LDL+G +L L + N+ NL+TL+L C
Sbjct: 849 SSIGNMTNLVRLDLTGCSSLVELPYSIGNMTNLETLELSGC 889
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG--ITTIQGLAKLKNLEALD 60
NLR L + S+ + S + NLTNLKKL+L C + + + NLE L+
Sbjct: 714 NLRELNLFGCSSLMELPSS------IGNLTNLKKLNLKLCSSLMELPSSIGNMTNLENLN 767
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDC 110
LS L ++N+TNL+ +LS ++ L + N+ NLK L+L +C
Sbjct: 768 LSGCSSLVELPSSISNMTNLENFNLSQCSSVVRLSFSIGNMTNLKELELNEC 819
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG--ITTIQGLAKLKNLEALDL 61
+R L+ +DLS + N+ L+ TNL++L+L GC + + L NL+ L+L
Sbjct: 689 IRNLKWMDLSHSKNLKELP----NLSTATNLRELNLFGCSSLMELPSSIGNLTNLKKLNL 744
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDC 110
L + N+TNL+ L+LSG +L L ++N+ NL+ +L C
Sbjct: 745 KLCSSLMELPSSIGNMTNLENLNLSGCSSLVELPSSISNMTNLENFNLSQC 795
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL----------------GLANLTNLKKLDLDGCG- 43
+ NL+ L++ + S+ +T G++T L + N+TNL +LDL GC
Sbjct: 808 MTNLKELELNECSSLVELTFGNMTNLKNLDPNRCSSLVEISSSIGNMTNLVRLDLTGCSS 867
Query: 44 -ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGL-ANLPN 101
+ + + NLE L+LS L + NL NL+ L+L L L + N+ +
Sbjct: 868 LVELPYSIGNMTNLETLELSGCSSLVELPSSIGNLHNLKRLNLRNCSTLMALPVNINMKS 927
Query: 102 LKTLDLRDCGI 112
L LDL C +
Sbjct: 928 LDFLDLSYCSV 938
>gi|189094735|emb|CAQ57412.1| expression site-associated gene 8 (ESAG8) protein [Trypanosoma
brucei brucei]
Length = 630
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 7/126 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQGLAKLKNLEAL 59
+A +R L+ L LS +N+T G L +NL++LD+ GC + + L L NL+ L
Sbjct: 273 IAGVRSLEKLSLSGCWNVTKGLEE---LCKFSNLRELDISGCPVLGSAVVLKNLINLKVL 329
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
+S N L GL L L+ L+LSG +++LG +ANL NLK LD+ C + G
Sbjct: 330 SVS-NCKNFKDLNGLERLVKLEKLNLSGCHGVSSLGFVANLSNLKELDISGCESLVCFDG 388
Query: 118 IQQFTS 123
+Q +
Sbjct: 389 LQDLNN 394
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L L L+ L+LS + ++S +ANL+NLK+LD+ GC + GL L NLE L
Sbjct: 343 LERLVKLEKLNLSGCHGVSSLGF----VANLSNLKELDISGCESLVCFDGLQDLNNLEVL 398
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCG 111
L + ++ + L+ ++ LDLSG + +T+L GL L L+ L L CG
Sbjct: 399 YL-RDVKSFTNVGAIKKLSKMRELDLSGCERITSLSGLETLKGLEELSLEGCG 450
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 46/133 (34%), Positives = 66/133 (49%), Gaps = 23/133 (17%)
Query: 1 LANLRYLQVLDLSANYNITSG--------SLTRLGL--ANLTN-----------LKKLDL 39
L L+ L+ L L + NIT G LT L L N+T+ LK LD+
Sbjct: 202 LCRLKTLEALSLDSCINITKGFDKICALPQLTSLSLCQTNVTDKDLRCIHPDEKLKVLDI 261
Query: 40 DGCG-ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL-TTLGLA 97
C IT + +A +++LE L LS + + LE L +NL+ LD+SG L + + L
Sbjct: 262 SSCHEITDLTAIAGVRSLEKLSLSGCWNVTKGLEELCKFSNLRELDISGCPVLGSAVVLK 321
Query: 98 NLPNLKTLDLRDC 110
NL NLK L + +C
Sbjct: 322 NLINLKVLSVSNC 334
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEALDL 61
NLR + VL+LS N+ S GL LT LK+L L GC ITTI + L+NL+ L
Sbjct: 506 NLRNVCVLELSCCENLEDLS----GLQCLTGLKELYLIGCEEITTIGVVGNLRNLKCLST 561
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT---LGLANLPNLK 103
L L GL L NL+ LDLSG L++ + L +LP L+
Sbjct: 562 CWCANLK-ELGGLERLVNLEKLDLSGCCGLSSSVFMELMSLPKLQ 605
>gi|404413365|ref|YP_006698952.1| hypothetical protein LMOSLCC7179_1259 [Listeria monocytogenes
SLCC7179]
gi|404239064|emb|CBY60465.1| leucine-rich repeat domain protein (LPXTG motif) [Listeria
monocytogenes SLCC7179]
Length = 589
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 12/126 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT--IQGLAKLKNLEA 58
L N+ L + +++A+Y + L++L+KL ++G + I L+ L NL
Sbjct: 93 LKNITTLSINNINASYE---------PIQTLSSLEKLVINGENVNADIIPDLSVLSNLTF 143
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQG 117
LDLS ++N+ NL LD+S N+ +T + L NLP+L+ L + DC IT +G
Sbjct: 144 LDLSRTNIDDTIFSKISNIPNLNKLDISNNKGITKISELNNLPSLQELRVSDCQITDFRG 203
Query: 118 IQQFTS 123
I++F S
Sbjct: 204 IEKFPS 209
>gi|153954698|ref|YP_001395463.1| hypothetical protein CKL_2080 [Clostridium kluyveri DSM 555]
gi|219855167|ref|YP_002472289.1| hypothetical protein CKR_1824 [Clostridium kluyveri NBRC 12016]
gi|146347556|gb|EDK34092.1| Hypothetical protein CKL_2080 [Clostridium kluyveri DSM 555]
gi|219568891|dbj|BAH06875.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 369
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G+ +LTNL+KLDL G I+ I L L NL+ L+L N + L NLTNLQ LDL
Sbjct: 174 GIESLTNLQKLDLYGNKISDITVLKDLTNLQELNLGYNKI--NDITTLKNLTNLQKLDLY 231
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NQ L +L NLKTLDL D I+ I
Sbjct: 232 VNQISDISALKDLTNLKTLDLEDNLISNI 260
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ LDL N I+ S L +LTNLK LDL+ I+ I L L NL+ LD
Sbjct: 219 LKNLTNLQKLDLYVN-QISDIS----ALKDLTNLKTLDLEDNLISNISILEGLYNLKILD 273
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L +Y ++ L L NLQ + NQ L L NLKTLDL D I+ I
Sbjct: 274 L--DYNKISNISALKGLYNLQNISAYKNQISDISALKGLYNLKTLDLTDNQISDI 326
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L +LTNL++L+L I I L L NL+ LDL N + L +LTNL+ LDL
Sbjct: 197 LKDLTNLQELNLGYNKINDITTLKNLTNLQKLDLYVNQI--SDISALKDLTNLKTLDLED 254
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
N L L NLK LDL I+ I ++
Sbjct: 255 NLISNISILEGLYNLKILDLDYNKISNISALK 286
>gi|46447250|ref|YP_008615.1| hypothetical protein pc1616 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400891|emb|CAF24340.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 813
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 61/109 (55%), Gaps = 12/109 (11%)
Query: 27 GLANLT---NLKKLDLDGC-GITTIQ--GLAKLKNLEALDLSSNYYL-HGSLEGLANLTN 79
GLA+LT NL+ LDL GC + + Q L+ L NL+ L+LS + L H LE L L N
Sbjct: 648 GLAHLTSLVNLEHLDLSGCYHLPSFQLIYLSSLVNLQHLNLSECFGLCHDGLEDLTPLMN 707
Query: 80 LQVLDLSGNQNLTTLGLANLP-----NLKTLDLRDCGITTIQGIQQFTS 123
LQ LDLSG NLT GLA L +L+ LDL C T G+ TS
Sbjct: 708 LQYLDLSGCINLTDQGLAYLTSLVGLDLQHLDLSGCKKITDTGLAHLTS 756
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 72/131 (54%), Gaps = 13/131 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L++L LQ L+LS + + L L L NL+ LDL GC T QGLA L +L LD
Sbjct: 677 LSSLVNLQHLNLSECFGLCHDGLE--DLTPLMNLQYLDLSGCINLTDQGLAYLTSLVGLD 734
Query: 61 LSSNYYLHGSLE----GLANLTNL---QVLDLSGNQNLTTLGLANLP---NLKTLDLRDC 110
L + L G + GLA+LT+L Q L+LS NLT GLA+L NL+ L+LR+C
Sbjct: 735 LQ-HLDLSGCKKITDTGLAHLTSLVTLQHLNLSECVNLTDTGLAHLVSLVNLQYLELREC 793
Query: 111 GITTIQGIQQF 121
T G+ +
Sbjct: 794 KNITDAGLAHY 804
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L N + L+VL L Y L L +LT L+ LDL C + GLA L +L AL
Sbjct: 349 LKNCKNLKVLCLKIFYTPIDTGLAHL--TSLTALQHLDLSECYLLKDTGLAHLSSLTALQ 406
Query: 60 --DLS-SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
DLS S + L L L +LQ LDLS ++NLT GLA+L L+ L L DC
Sbjct: 407 YLDLSDSGNFTDAGLAHLTPLVSLQHLDLSKSENLTGDGLAHLTPLVALRHLGLSDCRNL 466
Query: 114 TIQGIQQFTS 123
T G+ T
Sbjct: 467 TDAGLAHLTP 476
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 62/119 (52%), Gaps = 14/119 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L++L L+ LDLS N+T L L LT L+ LDL C T +GLA L L AL
Sbjct: 553 LSSLTALKHLDLSWRENLTDAGLAHL--TPLTALRHLDLSWCENLTDEGLAYLTPLVALQ 610
Query: 61 LSSNYYLHGS------LEGLANLTNLQVLDLSGNQNLTTLGLANLP---NLKTLDLRDC 110
S L GS LE LA+L+ L+ L L+ + + GLA+L NL+ LDL C
Sbjct: 611 YLS---LKGSDITDEGLEHLAHLSALRHLSLNDCRRINGYGLAHLTSLVNLEHLDLSGC 666
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L L LQ LDLS + N+T L L L L+ L L C T GLA L L AL
Sbjct: 424 LTPLVSLQHLDLSKSENLTGDGLAHL--TPLVALRHLGLSDCRNLTDAGLAHLTPLVALR 481
Query: 60 --DLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGI 112
DLS L L L++L LQ L L +NLT GLA+L L TL+ D G+
Sbjct: 482 HLDLSECKNLTDDGLVHLSSLVALQYLSLKLCENLTDAGLAHLTPLTTLEHLDLGL 537
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLA---KLKNLE 57
L L L+ LDLS N+T L L ++L L+ L L C T GLA L LE
Sbjct: 474 LTPLVALRHLDLSECKNLTDDGLVHL--SSLVALQYLSLKLCENLTDAGLAHLTPLTTLE 531
Query: 58 ALDL-----SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRD 109
LDL + L L++LT L+ LDLS +NLT GLA+L L+ LDL
Sbjct: 532 HLDLGLDLGCCHNLTDDGLAHLSSLTALKHLDLSWRENLTDAGLAHLTPLTALRHLDLSW 591
Query: 110 CGITTIQGIQQFTS 123
C T +G+ T
Sbjct: 592 CENLTDEGLAYLTP 605
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 26 LGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL---DLSSNYYLHGS-LEGLANLTNLQ 81
L L N NLK L L GLA L +L AL DLS Y L + L L++LT LQ
Sbjct: 347 LALKNCKNLKVLCLKIFYTPIDTGLAHLTSLTALQHLDLSECYLLKDTGLAHLSSLTALQ 406
Query: 82 VLDLSGNQNLTTLGLANLPNLKTLDLRD 109
LDLS + N T GLA+L L +L D
Sbjct: 407 YLDLSDSGNFTDAGLAHLTPLVSLQHLD 434
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 55/116 (47%), Gaps = 16/116 (13%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKL-------DLDGCGITTIQGLAKL 53
L++L LQ L L N+T GLA+LT L L DL C T GLA L
Sbjct: 499 LSSLVALQYLSLKLCENLTDA-----GLAHLTPLTTLEHLDLGLDLGCCHNLTDDGLAHL 553
Query: 54 KNLEAL---DLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
+L AL DLS L L L LT L+ LDLS +NLT GLA L L L
Sbjct: 554 SSLTALKHLDLSWRENLTDAGLAHLTPLTALRHLDLSWCENLTDEGLAYLTPLVAL 609
>gi|189094650|emb|CAQ57314.1| expression site-associated gene 8 (ESAG8) protein [Trypanosoma
brucei brucei]
gi|189094660|emb|CAQ57326.1| expression site-associated gene 8 (ESAG8) protein [Trypanosoma
brucei brucei]
Length = 630
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 63/114 (55%), Gaps = 10/114 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC---GITTIQGLAKLKNLE 57
+ +R L+ L LS +N+T G L +NL++LD+ GC G + L L NL+
Sbjct: 273 IGGVRSLEKLSLSGCWNVTKGLEE---LCKFSNLRELDISGCLVLGSAVV--LRNLINLK 327
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC 110
L +S N L GL L NL+ L+LSG +++LG +ANL NLK LD+ C
Sbjct: 328 VLSVS-NCKNFKDLNGLERLVNLEKLNLSGCHGVSSLGFVANLSNLKELDISGC 380
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGC-GITTIQGLAKLKNLEA 58
L L L+ L+LS + ++S LG +ANL+NLK+LD+ GC + GL L NLE
Sbjct: 343 LERLVNLEKLNLSGCHGVSS-----LGFVANLSNLKELDISGCESLVCFDGLKDLNNLEV 397
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCG 111
L L + ++ + NL+ ++ LDLSG + +T+L GL L L+ L L CG
Sbjct: 398 LYL-RDVKSFTNVGAIKNLSKMRELDLSGCERITSLSGLETLKGLEELSLEGCG 450
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 59/107 (55%), Gaps = 9/107 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
+ NLR + VL+LS N+ S GL LT L++L L GC ITTI + L+NL+ L
Sbjct: 504 IWNLRNVCVLELSCCENLDDLS----GLQCLTGLEELYLIGCEEITTIGVVGNLRNLKCL 559
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT---LGLANLPNLK 103
+ L L GL L NL+ LDLSG L++ + L +LP L+
Sbjct: 560 NTCWCANLK-ELGGLERLVNLEKLDLSGCCGLSSSVFMELMSLPKLQ 605
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 23/133 (17%)
Query: 1 LANLRYLQVLDLSANYNITSG--------SLTRLGLA--NLTN-----------LKKLDL 39
L L+ L+ L L NIT G LT L L N+T+ LK LD+
Sbjct: 202 LFRLKTLEALSLDNCINITKGFDKICALPQLTSLSLCQTNVTDKDLRCIHPDGKLKMLDI 261
Query: 40 DGCG-ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL-TTLGLA 97
C IT + + +++LE L LS + + LE L +NL+ LD+SG L + + L
Sbjct: 262 SSCHEITDLTAIGGVRSLEKLSLSGCWNVTKGLEELCKFSNLRELDISGCLVLGSAVVLR 321
Query: 98 NLPNLKTLDLRDC 110
NL NLK L + +C
Sbjct: 322 NLINLKVLSVSNC 334
>gi|296487996|tpg|DAA30109.1| TPA: leucine-rich repeats and IQ motif containing 1 [Bos taurus]
Length = 1668
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+N + L+ +D N+ + + NL NL + L+ +T++ GL N+++L+
Sbjct: 837 LSNCKRLKYIDAQENH------IETINCENLENLCIVLLNKNQLTSLHGLDGCTNIQSLE 890
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
LS N + GL +L NLQ L + NQ ++T GL + P L LD +T ++GI+Q
Sbjct: 891 LSHNKITR--IGGLESLKNLQQLIVDHNQLISTTGLCDTPTLMYLDCSHNHLTEVEGIEQ 948
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
Query: 7 LQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY 65
+Q L+LS N +TR+G L +L NL++L +D + + GL L LD S N+
Sbjct: 886 IQSLELSHN------KITRIGGLESLKNLQQLIVDHNQLISTTGLCDTPTLMYLDCSHNH 939
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
+EG+ LQ+L L GN L N L+ L L D I+T ++ F+SY
Sbjct: 940 LTE--VEGIEQCGLLQILKLQGNYLSELPFLGNHVLLRELHLDDNSIST---VETFSSY 993
>gi|300798577|ref|NP_001178064.1| leucine-rich repeat and IQ domain-containing protein 1 [Bos taurus]
Length = 1668
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+N + L+ +D N+ + + NL NL + L+ +T++ GL N+++L+
Sbjct: 837 LSNCKRLKYIDAQENH------IETINCENLENLCIVLLNKNQLTSLHGLDGCTNIQSLE 890
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
LS N + GL +L NLQ L + NQ ++T GL + P L LD +T ++GI+Q
Sbjct: 891 LSHNKITR--IGGLESLKNLQQLIVDHNQLISTTGLCDTPTLMYLDCSHNHLTEVEGIEQ 948
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
Query: 7 LQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY 65
+Q L+LS N +TR+G L +L NL++L +D + + GL L LD S N+
Sbjct: 886 IQSLELSHN------KITRIGGLESLKNLQQLIVDHNQLISTTGLCDTPTLMYLDCSHNH 939
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
+EG+ LQ+L L GN L N L+ L L D I+T ++ F+SY
Sbjct: 940 LTE--VEGIEQCGLLQILKLQGNYLSELPFLGNHVLLRELHLDDNSIST---VETFSSY 993
>gi|425461912|ref|ZP_18841386.1| Genome sequencing data, contig C325 (fragment) [Microcystis
aeruginosa PCC 9808]
gi|389825146|emb|CCI25294.1| Genome sequencing data, contig C325 (fragment) [Microcystis
aeruginosa PCC 9808]
Length = 215
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
LANLTNL +L L I + LA L NL LDL +N + + LANLTNL+VL LS
Sbjct: 92 PLANLTNLIELRLRQNQIVNVNALANLTNLTHLDLQTNQII--DITSLANLTNLEVLLLS 149
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
N+ LAN NL+TL L D I + +
Sbjct: 150 DNKIKDITPLANFTNLRTLSLMDNQIVDVSPL 181
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Query: 8 QVLDLSANYNITSGSLTRL---------GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
Q++D++ N+T+ RL LANLTNL LDL I I LA L NLE
Sbjct: 86 QIVDITPLANLTNLIELRLRQNQIVNVNALANLTNLTHLDLQTNQIIDITSLANLTNLEV 145
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
L LS N + LAN TNL+ L L NQ + LANL NL+ L
Sbjct: 146 LLLSDNKI--KDITPLANFTNLRTLSLMDNQIVDVSPLANLNNLEVL 190
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
LTNL++L L I I LA L NL L L N ++ + LANLTNL LDL NQ
Sbjct: 74 LTNLQELSLVNNQIVDITPLANLTNLIELRLRQNQIVN--VNALANLTNLTHLDLQTNQI 131
Query: 91 LTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
+ LANL NL+ L L D I I + FT
Sbjct: 132 IDITSLANLTNLEVLLLSDNKIKDITPLANFT 163
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L LDL N I SL ANLTNL+ L L I I LA NL L
Sbjct: 115 LANLTNLTHLDLQTNQIIDITSL-----ANLTNLEVLLLSDNKIKDITPLANFTNLRTLS 169
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLP 100
L N + S LANL NL+VL LS + L T + P
Sbjct: 170 LMDNQIVDVS--PLANLNNLEVLFLSSHAKLITCPIELKP 207
>gi|225465991|ref|XP_002264576.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
GSO1-like [Vitis vinifera]
Length = 1031
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC---GITTIQGLAKLKNLEALD 60
L LQ L + NYN GS + L+N +L+ LDL G IQGL NLE LD
Sbjct: 189 LPSLQNLIIGQNYNF-KGSFSAKELSNFKDLETLDLRTNNLNGSIKIQGLVPFNNLEVLD 247
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ---NLTTLGLANLPNLKTLDL 107
LS+N + + NLT+LQ L L+ NQ L G L NL+ LDL
Sbjct: 248 LSNNRFTGSIPPYIWNLTSLQALSLADNQLTGPLPVEGFCKLKNLQELDL 297
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 16/126 (12%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDG---CGITTIQGLAKLKNLEALDLSS 63
L+VLDLS N +GS+ + NLT+L+ L L G ++G KLKNL+ LDLS
Sbjct: 243 LEVLDLSNNR--FTGSIPPY-IWNLTSLQALSLADNQLTGPLPVEGFCKLKNLQELDLSG 299
Query: 64 NYYLHGSLEG-----LANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
N SL+G L+N+ +L++LDLS NQ + + + NL +L+ D G ++G
Sbjct: 300 N-----SLDGMFPPCLSNMRSLKLLDLSLNQFTGKIPSSLISNLTSLEYLDLGSNRLEGR 354
Query: 119 QQFTSY 124
F+++
Sbjct: 355 LSFSAF 360
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 18/135 (13%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI--QGLAKLKNLEA 58
+ NL LQ L L+ N +G L G L NL++LDL G + + L+ +++L+
Sbjct: 261 IWNLTSLQALSLADNQ--LTGPLPVEGFCKLKNLQELDLSGNSLDGMFPPCLSNMRSLKL 318
Query: 59 LDLSSNYY---LHGSLEGLANLTNLQVLDLSGNQ---NLTTLGLANLPNLKTL------D 106
LDLS N + + SL ++NLT+L+ LDL N+ L+ +N NL+ + D
Sbjct: 319 LDLSLNQFTGKIPSSL--ISNLTSLEYLDLGSNRLEGRLSFSAFSNHSNLEVIVLSSDSD 376
Query: 107 LRDCGITTIQGIQQF 121
+ + + + QF
Sbjct: 377 IFEVETESTSWVPQF 391
>gi|147801953|emb|CAN75055.1| hypothetical protein VITISV_039451 [Vitis vinifera]
Length = 730
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 7 LQVLDLSAN--YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN 64
L+VL+LS N IT+GSL R L L+L IT I+GL +L L LDLS N
Sbjct: 463 LKVLNLSGNAIVRITAGSLPR-------GLHMLNLSKNKITMIEGLRELTRLRILDLSYN 515
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
+ GLA+ ++L+ L L+GN+ GL L L LDLR I+T + + Q +
Sbjct: 516 RIFRIA-HGLASCSSLKELYLAGNKISEVEGLHRLLKLNILDLRYNKISTAKCLGQLAA 573
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L L L++LDLS N + R+ GLA+ ++LK+L L G I+ ++GL +L L
Sbjct: 501 LRELTRLRILDLSYN------RIFRIAHGLASCSSLKELYLAGNKISEVEGLHRLLKLNI 554
Query: 59 LDLSSNYYLHGSLEG--LANLTNLQVLDLSGNQNLTTLG 95
LDL N G AN +LQ + L GN +G
Sbjct: 555 LDLRYNKISTAKCLGQLAANYNSLQAISLEGNPAQKNVG 593
>gi|425436287|ref|ZP_18816725.1| Genome sequencing data, contig C325 (fragment) [Microcystis
aeruginosa PCC 9432]
gi|389679029|emb|CCH92148.1| Genome sequencing data, contig C325 (fragment) [Microcystis
aeruginosa PCC 9432]
Length = 225
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
LANLTNL +L L I + LA L NL LDL +N + + LANLTNL+VL LS
Sbjct: 92 PLANLTNLIELRLRQNQIVNVNALANLTNLTHLDLQTNQII--DITSLANLTNLEVLLLS 149
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
N+ LAN NL+TL L D I + +
Sbjct: 150 DNKIKDITPLANFTNLRTLSLMDNQIVDVSPL 181
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 8 QVLDLSANYNITSGSLTRL---------GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
Q++DL+ N+T+ RL LANLTNL LDL I I LA L NLE
Sbjct: 86 QIVDLTPLANLTNLIELRLRQNQIVNVNALANLTNLTHLDLQTNQIIDITSLANLTNLEV 145
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGI 112
L LS N + LAN TNL+ L L NQ + LANL NL+ L L D I
Sbjct: 146 LLLSDNKI--KDITPLANFTNLRTLSLMDNQIVDVSPLANLNNLEVLFLSDNKI 197
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
LTNL++L L I + LA L NL L L N ++ + LANLTNL LDL NQ
Sbjct: 74 LTNLQELSLVNNQIVDLTPLANLTNLIELRLRQNQIVN--VNALANLTNLTHLDLQTNQI 131
Query: 91 LTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
+ LANL NL+ L L D I I + FT
Sbjct: 132 IDITSLANLTNLEVLLLSDNKIKDITPLANFT 163
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L LDL N I SL ANLTNL+ L L I I LA NL L
Sbjct: 115 LANLTNLTHLDLQTNQIIDITSL-----ANLTNLEVLLLSDNKIKDITPLANFTNLRTLS 169
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
L N + S LANL NL+VL LS N+
Sbjct: 170 LMDNQIVDVS--PLANLNNLEVLFLSDNK 196
>gi|315282120|ref|ZP_07870600.1| cell wall anchor domain-containing protein, partial [Listeria
marthii FSL S4-120]
gi|313614237|gb|EFR87901.1| cell wall anchor domain-containing protein [Listeria marthii FSL
S4-120]
Length = 432
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT--IQGLAKLKNLEA 58
L L Y + L++ +I++GS + A LTNL+ L + G +T+ I L L L++
Sbjct: 86 LTGLEYAKNLNMLTISDISAGSYAPI--AQLTNLEHLTITGSNVTSNAIPDLTSLTALKS 143
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTIQG 117
L +++ + + N+++L L+L GN+N+T + L +LPNL TL + DC I +G
Sbjct: 144 LSITNASIDNSVYSKINNISSLASLNLKGNKNITNVTNLKSLPNLSTLVVEDCQIADYKG 203
Query: 118 IQQF 121
++ F
Sbjct: 204 VEDF 207
>gi|255581263|ref|XP_002531443.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis]
gi|223528936|gb|EEF30930.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis]
Length = 912
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 14/112 (12%)
Query: 7 LQVLDLSANYNITSGSLTRLGLAN--------LTNLKKLDLDGCGIT----TIQGLAKLK 54
+Q DL N+ L ++ L N +T+LK L L GCG+T +QGL +L
Sbjct: 168 IQAQDLPNFENLEELYLDKIELENSFLQTVGVMTSLKVLSLSGCGLTGALPNVQGLCELI 227
Query: 55 NLEALDLSSNYYLHGSLEG-LANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
+L LD+SSN + HG L L+NLT+LQ+LDLS NQ + + + L LK+L
Sbjct: 228 HLRVLDVSSNEF-HGILPWCLSNLTSLQLLDLSSNQFVGDISNSPLKILKSL 278
>gi|46446906|ref|YP_008271.1| hypothetical protein pc1272 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400547|emb|CAF23996.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 618
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L L L L+LS YN T L L A L L+ LDL+GC T GLA L L AL
Sbjct: 446 LTPLVALTHLNLSWCYNFTDAGLAHL--APLVALQHLDLNGCWQLTDAGLAHLAPLVALT 503
Query: 60 --DLSS-NYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKT---LDLRDCGIT 113
DLSS N+ L L L LQ LDLS +NLT GLA+L L L+L C
Sbjct: 504 HLDLSSCNHLTDAGLPHLTPLVALQHLDLSYCRNLTDAGLAHLAPLVALTHLNLSSCNHF 563
Query: 114 TIQGIQQFTS 123
T G+ T
Sbjct: 564 TDAGLTHLTP 573
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
LA L L LDLS+ ++T L L L L+ LDL C T GLA L L AL
Sbjct: 496 LAPLVALTHLDLSSCNHLTDAGLPHL--TPLVALQHLDLSYCRNLTDAGLAHLAPLVALT 553
Query: 60 --DLSS-NYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLD 106
+LSS N++ L L L LQ L+L+ +N T GLA+ +L T
Sbjct: 554 HLNLSSCNHFTDAGLTHLTPLLALQDLNLNYCENFTDAGLAHFKSLATFP 603
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLA---KLKNLEALDLSS 63
++ L+ S N ++T L L L N NLK L L C T GLA L L+ L+L+
Sbjct: 228 IEELNFSKNASLTDAHL--LALKNCKNLKVLHLQECRNLTDAGLAYLTPLTTLQHLNLAG 285
Query: 64 NYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG 95
+ + L L L LQ L+LS +NLT G
Sbjct: 286 CKFANAGLAHLTPLVALQHLNLSHCRNLTDAG 317
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLK---NLE 57
L L L L+LS+ N+T L L LT L L+L C T GLA L L
Sbjct: 346 LTPLTALTYLNLSSCNNLTDAGLAHL--TPLTALTYLNLSSCNNLTDAGLAHLTPLVTLT 403
Query: 58 ALDLSSNY-YLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
L+LS Y + L L L LQ LDL +N+T GLA+L L L
Sbjct: 404 HLNLSWCYNFTDAGLAHLTPLVALQHLDLGHCRNITDAGLAHLTPLVAL 452
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 50/114 (43%), Gaps = 9/114 (7%)
Query: 17 NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL---DLSS-NYYLHGSLE 72
NIT L L LT L L+L C T GLA L L AL +LSS N L
Sbjct: 337 NITDAGLAHL--TPLTALTYLNLSSCNNLTDAGLAHLTPLTALTYLNLSSCNNLTDAGLA 394
Query: 73 GLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQGIQQFTS 123
L L L L+LS N T GLA+L L+ LDL C T G+ T
Sbjct: 395 HLTPLVTLTHLNLSWCYNFTDAGLAHLTPLVALQHLDLGHCRNITDAGLAHLTP 448
>gi|159486617|ref|XP_001701335.1| variable flagella protein 1 [Chlamydomonas reinhardtii]
gi|5814346|gb|AAD52203.1|AF154916_1 variable flagellar number protein [Chlamydomonas reinhardtii]
gi|158271818|gb|EDO97630.1| variable flagella protein 1 [Chlamydomonas reinhardtii]
Length = 1216
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/91 (42%), Positives = 49/91 (53%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LTNL++L L G I I GL L L L+LSSN L LT L L+L+
Sbjct: 39 LHRLTNLRRLCLHGNNIAHIDGLTGLTALVDLNLSSNAVSAIDAGALRGLTRLTSLNLAS 98
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
N+ T GL L NL+TL+L IT+I G+
Sbjct: 99 NRLQTVTGLDGLSNLETLNLSFNYITSIAGL 129
>gi|225447711|ref|XP_002272885.1| PREDICTED: uncharacterized protein LOC100257895 [Vitis vinifera]
gi|296081251|emb|CBI17995.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 7 LQVLDLSAN--YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN 64
L+VL+LS N IT+GSL R L L+L IT I+GL +L L LDLS N
Sbjct: 405 LKVLNLSGNAIVRITAGSLPR-------GLHMLNLSKNKITMIEGLRELTRLRILDLSYN 457
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
+ GLA+ ++L+ L L+GN+ GL L L LDLR I+T + + Q +
Sbjct: 458 RIFRIA-HGLASCSSLKELYLAGNKISEVEGLHRLLKLNILDLRYNKISTAKCLGQLAA 515
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L L L++LDLS N + R+ GLA+ ++LK+L L G I+ ++GL +L L
Sbjct: 443 LRELTRLRILDLSYN------RIFRIAHGLASCSSLKELYLAGNKISEVEGLHRLLKLNI 496
Query: 59 LDLSSNYYLHGSLEG--LANLTNLQVLDLSGNQNLTTLG 95
LDL N G AN +LQ + L GN +G
Sbjct: 497 LDLRYNKISTAKCLGQLAANYNSLQAISLEGNPAQKNVG 535
>gi|50546821|ref|XP_500880.1| YALI0B14355p [Yarrowia lipolytica]
gi|49646746|emb|CAG83131.1| YALI0B14355p [Yarrowia lipolytica CLIB122]
Length = 352
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL+ L +L+ L + IT I+GL KLKNLE L +S N +EGL + T L+ LD++
Sbjct: 213 GLSGLESLETLSIQSNRITKIEGLEKLKNLEELYISHNGI--TKIEGLEHNTKLRTLDIT 270
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
GN T G+++L +L+ DC ++ + I+
Sbjct: 271 GNPITTLEGVSHLKDLEEFWASDCKLSNYKEIE 303
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL N+ +L L+L I I+ L LKNL L L N L GL+ L +L+ L +
Sbjct: 169 GLDNMPDLVNLELGANRIRVIENLDHLKNLRQLWLGKNKI--RKLSGLSGLESLETLSIQ 226
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ GL L NL+ L + GIT I+G++ T
Sbjct: 227 SNRITKIEGLEKLKNLEELYISHNGITKIEGLEHNTK 263
>gi|119566|sp|P26337.1|ESA8C_TRYEQ RecName: Full=Putative adenylate cyclase regulatory protein
gi|10970|emb|CAA42028.1| eESAG8c [Trypanosoma equiperdum]
Length = 630
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQGLAKLKNLEAL 59
+ +R L+ L LS +N+T G L +NL++LD+ GC + + L L NL+ L
Sbjct: 273 IGGMRSLEKLSLSGCWNVTKGLEE---LCKFSNLRELDISGCLVLGSAVVLKNLINLKVL 329
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
+S N L GL L NL L+LSG +++LG +ANL NLK LD+ C + G
Sbjct: 330 SVS-NCKNFKDLNGLERLVNLDKLNLSGCHGVSSLGFVANLSNLKELDISGCESLVCFDG 388
Query: 118 IQQFTS 123
+Q +
Sbjct: 389 LQDLNN 394
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L L L L+LS + ++S +ANL+NLK+LD+ GC + GL L NLE L
Sbjct: 343 LERLVNLDKLNLSGCHGVSSLGF----VANLSNLKELDISGCESLVCFDGLQDLNNLEVL 398
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCG 111
L + ++ + NL+ ++ LDLSG + +T+L GL L L+ L L CG
Sbjct: 399 YL-RDVKSFTNVGAIKNLSKMRELDLSGCERITSLSGLETLKGLEELSLEGCG 450
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 23/133 (17%)
Query: 1 LANLRYLQVLDLSANYNITSG--------SLTRLGL--ANLTN-----------LKKLDL 39
L L+ L+ L L + NIT G LT L L N+T+ LK L
Sbjct: 202 LCRLKTLEALSLDSCINITKGFDKICALPQLTSLSLCQTNVTDKDLRCIHPDGKLKVLRY 261
Query: 40 DGCG-ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL-TTLGLA 97
C IT + + +++LE L LS + + LE L +NL+ LD+SG L + + L
Sbjct: 262 SSCHEITDLTAIGGMRSLEKLSLSGCWNVTKGLEELCKFSNLRELDISGCLVLGSAVVLK 321
Query: 98 NLPNLKTLDLRDC 110
NL NLK L + +C
Sbjct: 322 NLINLKVLSVSNC 334
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEALDL 61
NLR + V++LS N+ S GL LT L++L L GC IT I + L+NL+ L
Sbjct: 506 NLRNVCVVELSCCENLEDLS----GLQCLTGLEELYLIGCEEITPIGVVGNLRNLKCLST 561
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT---LGLANLPNLK 103
L L GL L NL+ LDLSG L++ + L +LP L+
Sbjct: 562 CWCANLK-ELGGLDRLVNLEKLDLSGCCGLSSSVFMELMSLPKLQ 605
>gi|46447588|ref|YP_008953.1| hypothetical protein pc1954 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401229|emb|CAF24678.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 704
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLA---KLKNLE 57
L L+ LQ LDLS N+T+ L+ L A LT L+ LDL C GL L L+
Sbjct: 315 LKPLKALQHLDLSYCKNLTNVGLSHL--APLTALQHLDLSYCWQLADAGLVYLTPLTGLQ 372
Query: 58 ALDLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKT---LDLRDCGIT 113
LDLS + L L L LT LQ LDLS +NLT +GLA+L LK L+LR+C
Sbjct: 373 HLDLSGYHKLTDAGLAHLTPLTALQCLDLSYCENLTDVGLAHLMPLKALQHLNLRNCRNL 432
Query: 114 TIQGIQQFTS 123
T G+
Sbjct: 433 TDDGLAHLAP 442
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 67/128 (52%), Gaps = 15/128 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLK---KLDLDGCGITTIQGLAKLKNLE 57
L L LQ LDLS N LT +GLA+L LK L+L C T GLA L L
Sbjct: 390 LTPLTALQCLDLSYCEN-----LTDVGLAHLMPLKALQHLNLRNCRNLTDDGLAHLAPLT 444
Query: 58 AL---DLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKT---LDLRDC 110
AL DLS + L L L LT LQ LDLS +NLT +GLA+L LK L+LR+C
Sbjct: 445 ALQHLDLSYCWQLTDAGLAHLTPLTGLQRLDLSYCENLTDVGLAHLIPLKALQHLNLRNC 504
Query: 111 GITTIQGI 118
T G+
Sbjct: 505 RNLTDDGL 512
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 63/122 (51%), Gaps = 19/122 (15%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
LA L LQ LDLS + +T L L LT L++LDL C T GLA L L+AL
Sbjct: 440 LAPLTALQHLDLSYCWQLTDAGLAHL--TPLTGLQRLDLSYCENLTDVGLAHLIPLKALQ 497
Query: 60 --------DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLR 108
+L+ + +H LA LT LQ LDLS NLT GLA+L L+ LDL+
Sbjct: 498 HLNLRNCRNLTDDGLVH-----LAPLTALQHLDLSDCNNLTDAGLAHLTPLTALQHLDLK 552
Query: 109 DC 110
C
Sbjct: 553 YC 554
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 62/124 (50%), Gaps = 9/124 (7%)
Query: 5 RYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNL---EALDL 61
+ ++ L+ S N +T L L L N NLK L L+ C T GLA L L + LD+
Sbjct: 194 KEIEALNFSNNDYLTDAHL--LTLRNCENLKVLHLNACQAITDDGLAHLTPLTGLQHLDI 251
Query: 62 SSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQG 117
YL L L +LT LQ L+LSG +LT GLA+L L+ LDLR C T G
Sbjct: 252 RVCEYLTDDGLAYLTSLTGLQHLNLSGCYHLTDTGLAHLTPLTGLQHLDLRICEYLTATG 311
Query: 118 IQQF 121
+
Sbjct: 312 LAHL 315
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L L+ LQ L+L N+T L L A LT L+ LDL C T GLA L L AL
Sbjct: 490 LIPLKALQHLNLRNCRNLTDDGLVHL--APLTALQHLDLSDCNNLTDAGLAHLTPLTALQ 547
Query: 60 --DLSSNYYLHGS-LEGLANLTNLQVLDLSGNQNLTTLGLANLP---NLKTLDLRDCGIT 113
DL L G+ L LA LT LQ LDLS +NL GL +L L+ L L C
Sbjct: 548 HLDLKYCINLTGAGLAHLAFLTGLQYLDLSWCKNLIDAGLVHLKLLTALQYLGLSYCENL 607
Query: 114 TIQGIQQFTS 123
T G+ S
Sbjct: 608 TDDGLAHLRS 617
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 66/153 (43%), Gaps = 34/153 (22%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA-- 58
L +L LQ L+LS Y++T L L LT L+ LDL C T GLA LK L+A
Sbjct: 265 LTSLTGLQHLNLSGCYHLTDTGLAHL--TPLTGLQHLDLRICEYLTATGLAHLKPLKALQ 322
Query: 59 --------------------------LDLSSNYYLHGS-LEGLANLTNLQVLDLSGNQNL 91
LDLS + L + L L LT LQ LDLSG L
Sbjct: 323 HLDLSYCKNLTNVGLSHLAPLTALQHLDLSYCWQLADAGLVYLTPLTGLQHLDLSGYHKL 382
Query: 92 TTLGLANLPN---LKTLDLRDCGITTIQGIQQF 121
T GLA+L L+ LDL C T G+
Sbjct: 383 TDAGLAHLTPLTALQCLDLSYCENLTDVGLAHL 415
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
LA L LQ LDLS N+ L L L LT L+ L L C T GLA L++L AL
Sbjct: 565 LAFLTGLQYLDLSWCKNLIDAGLVHLKL--LTALQYLGLSYCENLTDDGLAHLRSLTALQ 622
Query: 60 DLSSNYYLHGSLEGLANL---TNLQVLDLSGNQNLTTLGLANLPNLKTL 105
L+ +Y + + GL +L T+LQ LDL QNLT GLA+L L L
Sbjct: 623 HLALIHYKNLTDAGLVHLRSLTSLQHLDLRYCQNLTGDGLAHLRTLTAL 671
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L LQ LDL N+T L L A LT L+ LDL C GL LK L AL
Sbjct: 540 LTPLTALQHLDLKYCINLTGAGLAHL--AFLTGLQYLDLSWCKNLIDAGLVHLKLLTALQ 597
Query: 61 -LSSNYYLHGSLEGLANL---TNLQVLDLSGNQNLTTLGLANL---PNLKTLDLRDCGIT 113
L +Y + + +GLA+L T LQ L L +NLT GL +L +L+ LDLR C
Sbjct: 598 YLGLSYCENLTDDGLAHLRSLTALQHLALIHYKNLTDAGLVHLRSLTSLQHLDLRYCQNL 657
Query: 114 TIQGIQQFTS 123
T G+ +
Sbjct: 658 TGDGLAHLRT 667
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 54 KNLEALDLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNL---KTLDLRD 109
K +EAL+ S+N YL L L N NL+VL L+ Q +T GLA+L L + LD+R
Sbjct: 194 KEIEALNFSNNDYLTDAHLLTLRNCENLKVLHLNACQAITDDGLAHLTPLTGLQHLDIRV 253
Query: 110 CGITTIQGIQQFTS 123
C T G+ TS
Sbjct: 254 CEYLTDDGLAYLTS 267
>gi|189094776|emb|CAQ57458.1| expression site-associated gene 8 (ESAG8) protein [Trypanosoma
brucei brucei]
Length = 676
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 67/122 (54%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQGLAKLKNLEAL 59
+ +R L+ L LS +N+T G L L++L++LD+ GC + + L L NL+ L
Sbjct: 273 IGGVRSLEKLSLSGCWNVTKGLEE---LCKLSSLRELDISGCPVLGSAVVLRNLINLKVL 329
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
+S N L GL L NL+ L+LSG +++LG + NL NLK LD+ C + G
Sbjct: 330 SVS-NCKNFKDLNGLERLVNLEKLNLSGCHGVSSLGFVVNLSNLKELDISGCESLVCFDG 388
Query: 118 IQ 119
+Q
Sbjct: 389 LQ 390
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 9/113 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGC-GITTIQGLAKLKNLEA 58
L L L+ L+LS + ++S LG + NL+NLK+LD+ GC + GL L NLE
Sbjct: 343 LERLVNLEKLNLSGCHGVSS-----LGFVVNLSNLKELDISGCESLVCFDGLQDLNNLEV 397
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDC 110
L L + ++ + NL+ ++ LDLSG + +T+L GL L L+ +R C
Sbjct: 398 LYLR-DVKSFTNVGAIKNLSKIRELDLSGCERITSLSGLETLKRLRKFKIRGC 449
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
+ NL L+VL +S N+ S GL LT L++L L C ITTI + L+NL+ L
Sbjct: 550 IWNLGKLRVLYVSECGNLDDLS----GLHCLTGLEELYLIVCKKITTIGVVGNLRNLKCL 605
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT---LGLANLPNLK 103
L L GL L NL+ +DLSG L++ + L +LP L+
Sbjct: 606 STCWCANLK-ELGGLERLVNLEKVDLSGCCGLSSSVFMELMSLPKLQ 651
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L NLR L++ N S +GL L L L++DG G+T I GL +LK LEAL
Sbjct: 158 LRNLRKLRMKRTMVNDMWCSS----IGL--LKFLVHLEVDGSRGVTDITGLCRLKTLEAL 211
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANL-PN--LKTLDLRDC----GI 112
L S + + + L L L L N+T L + P+ LK LD+ C +
Sbjct: 212 SLDSCINITKGFDKICALPQLTSLSLC-QTNVTDKDLRCIHPDGKLKVLDISSCHEITDL 270
Query: 113 TTIQGIQQF 121
T I G++
Sbjct: 271 TAIGGVRSL 279
>gi|330506767|ref|YP_004383195.1| internalin-A [Methanosaeta concilii GP6]
gi|328927575|gb|AEB67377.1| internalin-A, putative [Methanosaeta concilii GP6]
Length = 567
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+ L L LDLS N IT S L+ LTNL LDLD IT + L+ L NL LD
Sbjct: 162 LSGLTNLTDLDLSTNQ-ITDAS----PLSGLTNLTDLDLDNNQITDVSSLSGLINLMNLD 216
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
LSSN + SL G LTN+ LDL GNQ +T + L+ L NL LD+ I + +
Sbjct: 217 LSSNRITNVSLSG---LTNVVWLDLWGNQ-ITDVTLSGLTNLTWLDVSRNQIADVSSLSG 272
Query: 121 FT 122
T
Sbjct: 273 LT 274
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 60/111 (54%), Gaps = 13/111 (11%)
Query: 8 QVLDLSANYNITSGSLTRL---------GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
Q++D+S+ +TS RL L++L NL+ LDL IT + L+ L NL
Sbjct: 416 QIIDVSSLSALTSLKWLRLCSNHATDASSLSSLVNLRWLDLSSNQITDVSPLSGLYNLGW 475
Query: 59 LDLSSNYYLHGS-LEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLR 108
L+LSSN S L GLANLT L DLS NQ L+NL NL +DLR
Sbjct: 476 LNLSSNQITDVSPLSGLANLTGL---DLSSNQITDVSPLSNLTNLIWMDLR 523
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L + D +T + L+ LTNL L L G I + L+ L NL LD
Sbjct: 122 LANLETLSLWD---------NHITNVSLSGLTNLDTLLLWGNKIINVSSLSGLTNLTDLD 172
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQ 116
LS+N S L+ LTNL LDL NQ L+ L NL LDL IT +
Sbjct: 173 LSTNQITDAS--PLSGLTNLTDLDLDNNQITDVSSLSGLINLMNLDLSSNRITNVS 226
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L+ LTNL LDL IT L+ L NL LDL +N SL L NLT+L+ LS
Sbjct: 291 SLSGLTNLTDLDLSTNQITDASPLSGLTNLTYLDLDNNRINDVSLSDLTNLTDLE---LS 347
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L+ L NLK LDL + I I + T
Sbjct: 348 NNQINDVSSLSGLTNLKDLDLSNNQINDISSLSGLT 383
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+ L L LDLS N IT S L+ LTNL LDLD I + L+ L NL L+
Sbjct: 292 LSGLTNLTDLDLSTNQ-ITDAS----PLSGLTNLTYLDLDNNRINDV-SLSDLTNLTDLE 345
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
LS+N + L+ LTNL+ LDLS NQ L+ L NL L+L IT I
Sbjct: 346 LSNNQI--NDVSSLSGLTNLKDLDLSNNQINDISSLSGLTNLTDLELSSNEITNI 398
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 52/112 (46%), Gaps = 20/112 (17%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANL--------- 77
L+ LT LK+L+L IT + L+ L NLE L L N+ + SL GL NL
Sbjct: 97 SLSGLTGLKRLELSSNQITDV-SLSGLANLETLSLWDNHITNVSLSGLTNLDTLLLWGNK 155
Query: 78 ----------TNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
TNL LDLS NQ L+ L NL LDL + IT + +
Sbjct: 156 IINVSSLSGLTNLTDLDLSTNQITDASPLSGLTNLTDLDLDNNQITDVSSLS 207
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 11/123 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL YL DL N + + L++LTNL L+L I + L+ L NL+ LD
Sbjct: 317 LTNLTYL---DLDNNR------INDVSLSDLTNLTDLELSNNQINDVSSLSGLTNLKDLD 367
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
LS+N + L+ LTNL L+LS N+ L++L +L+ LDL + I + +
Sbjct: 368 LSNNQI--NDISSLSGLTNLTDLELSSNEITNISSLSSLASLRCLDLDNNQIIDVSSLSA 425
Query: 121 FTS 123
TS
Sbjct: 426 LTS 428
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L+ LT+LK L L T L+ L NL LDLSSN S L+ L NL L+LS
Sbjct: 422 SLSALTSLKWLRLCSNHATDASSLSSLVNLRWLDLSSNQITDVS--PLSGLYNLGWLNLS 479
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L+ L NL LDL IT + + T
Sbjct: 480 SNQITDVSPLSGLANLTGLDLSSNQITDVSPLSNLT 515
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL NL+ L L I+ L+ L L+ L+LSSN SL GLANL L + D
Sbjct: 75 GLERCINLENLSLRENEISDASSLSGLTGLKRLELSSNQITDVSLSGLANLETLSLWD-- 132
Query: 87 GNQNLTTLGLANLPNLKTL 105
++T + L+ L NL TL
Sbjct: 133 --NHITNVSLSGLTNLDTL 149
>gi|289434089|ref|YP_003463961.1| hypothetical protein lse_0722 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289170333|emb|CBH26873.1| conserved hypothetical protein (LPXTG motif) [Listeria seeligeri
serovar 1/2b str. SLCC3954]
Length = 2290
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 10 LDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH 68
LD +++S ++T + G++ LTNL ++L +T+I + L NL ++LS N
Sbjct: 148 LDSVTTLDVSSQNITDVTGISELTNLTSINLSENQLTSIAPITGLTNLTTINLSDNLLNT 207
Query: 69 GSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL 107
L N+ NL LDLS N +T L +A+LP L+T ++
Sbjct: 208 IELSSAQNIPNLTTLDLSDNPTITKLSIADLPKLETANM 246
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
L ++ LD+ IT + G+++L NL +++LS N S+ + LTNL ++LS N
Sbjct: 148 LDSVTTLDVSSQNITDVTGISELTNLTSINLSENQLT--SIAPITGLTNLTTINLSDNL- 204
Query: 91 LTTLGLA---NLPNLKTLDLRD 109
L T+ L+ N+PNL TLDL D
Sbjct: 205 LNTIELSSAQNIPNLTTLDLSD 226
>gi|403360327|gb|EJY79834.1| Leucine-rich repeat-containing protein, putative [Oxytricha
trifallax]
Length = 599
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLK + L+ GIT I+GL L+ L L L N +EGL L NL L+LS
Sbjct: 56 LEKYANLKSIWLECNGITKIEGLGHLQQLRMLYLHQNSI--DKMEGLDELVNLVTLNLSH 113
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ G++NL +LK+LD+ I+ ++G +Q +
Sbjct: 114 NRIKKIEGISNLVSLKSLDVSHNIISELEGFEQILT 149
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L +L+ L++L L N S+ ++ GL L NL L+L I I+G++ L +L++L
Sbjct: 78 LGHLQQLRMLYLHQN------SIDKMEGLDELVNLVTLNLSHNRIKKIEGISNLVSLKSL 131
Query: 60 DLSSNYYLHGSLEGLANL---TNLQVLDLSGNQ 89
D+S N + LEG + +L +DLS NQ
Sbjct: 132 DVSHN--IISELEGFEQILTCPSLTSVDLSNNQ 162
>gi|343414369|emb|CCD21014.1| leucine-rich repeat protein, putative [Trypanosoma vivax Y486]
Length = 469
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L LDLS I S L+ L++L+ LDL C GIT + L++L +L L
Sbjct: 177 LSKLSSLCTLDLSYCTGIKHES----PLSKLSSLRTLDLSHCTGITDVSPLSELSSLRTL 232
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L++L+ LDLS +T + L+ L +L+TLDL C GIT +
Sbjct: 233 DLSHCTGI-TDVSPLSELSSLRTLDLSHCTGITDVSPLSKLSSLRTLDLSHCTGITDVSP 291
Query: 118 IQQFTS 123
+ + +S
Sbjct: 292 LSELSS 297
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ LDLS IT S L+ L++L+ LDL C GIT + L+KL +L L
Sbjct: 223 LSELSSLRTLDLSHCTGITDVS----PLSELSSLRTLDLSHCTGITDVSPLSKLSSLRTL 278
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L++L+ LDLS +T + L+ L +L+ L L C GIT +
Sbjct: 279 DLSHCTGI-TDVSPLSELSSLRTLDLSHCTGITDVSPLSELSSLRMLYLSHCTGITDVSP 337
Query: 118 IQQFTS 123
+ + +S
Sbjct: 338 LSELSS 343
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 28 LANLTNLKKLDLDGC-GITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L+ L++L+ LD+ C GIT + L+KL N LDLS + + L+ L++L++L S
Sbjct: 62 LSKLSSLRTLDISHCTGITDVSPLSKLNNFVQLDLSHCTGI-TDVSPLSVLSSLRMLFFS 120
Query: 87 GNQNLTTLG-LANLPNLKTLDLRDC-GITTIQGIQQFTS 123
+T + L+ L +L+TLDL C GI + + + +S
Sbjct: 121 HCTGITDVSPLSVLSSLRTLDLSYCTGIKHVSPLSKLSS 159
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ + LQ LDLS +T S L+ + L+KL L C GIT + L+KL +L L
Sbjct: 16 LSKIIALQKLDLSHCTGVTDVS----PLSKMIGLEKLYLSHCTGITDVPPLSKLSSLRTL 71
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
D+S + + L+ L N LDLS +T + L+ L +L+ L C GIT +
Sbjct: 72 DISHCTGI-TDVSPLSKLNNFVQLDLSHCTGITDVSPLSVLSSLRMLFFSHCTGITDVSP 130
Query: 118 IQQFTS 123
+ +S
Sbjct: 131 LSVLSS 136
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ LDLS IT S L+ L++L+ L L C GIT + L++L +L L
Sbjct: 292 LSELSSLRTLDLSHCTGITDVS----PLSELSSLRMLYLSHCTGITDVSPLSELSSLRML 347
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTI 115
DLS + + L+ L++L +L LS +T + L + + L L +C GIT +
Sbjct: 348 DLSHCTGI-TDVSPLSELSSLHILGLSHCTGITDVSPLTTIIGFEKLYLSNCTGITDV 404
>gi|428303977|ref|YP_007140802.1| hypothetical protein Cri9333_0307 [Crinalium epipsammum PCC 9333]
gi|428245512|gb|AFZ11292.1| leucine-rich repeat-containing protein [Crinalium epipsammum PCC
9333]
Length = 353
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 11/120 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
LANL+ L +L+++++ NI L+ L+NL++L+L IT I+ +A L NL++
Sbjct: 201 LANLKTLAILEVNSSKVKNIQ-------PLSGLSNLRRLELQNNQITNIKAIASLTNLKS 253
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L L+ N L L+NL L + LS NQ + LA L +L+T+ L++ IT+IQ +
Sbjct: 254 LKLNRNQI--WDLRSLSNLKKLVSISLSHNQIVDVTPLAALTDLETISLQNNRITSIQSL 311
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
LANL L L+++ + IQ L+ L NL L+L +N +++ +A+LTNL+ L L+
Sbjct: 200 SLANLKTLAILEVNSSKVKNIQPLSGLSNLRRLELQNNQI--TNIKAIASLTNLKSLKLN 257
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L+NL L ++ L I + + T
Sbjct: 258 RNQIWDLRSLSNLKKLVSISLSHNQIVDVTPLAALT 293
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 27/143 (18%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKL------ 53
+ANL L+VL + +N +LT L +A+L NL L L G IT I+ A L
Sbjct: 113 IANLPNLEVLVIHSN------ALTDLTPIASLNNLTDLGLIGRNITDIRPFANLTQLQKF 166
Query: 54 -------KNLEALD----LSSNYYLH---GSLEGLANLTNLQVLDLSGNQNLTTLGLANL 99
+N++AL L+ +++ L LANL L +L+++ ++ L+ L
Sbjct: 167 TLWYSSIQNIDALKDLIQLTEVSFINTQISDLSSLANLKTLAILEVNSSKVKNIQPLSGL 226
Query: 100 PNLKTLDLRDCGITTIQGIQQFT 122
NL+ L+L++ IT I+ I T
Sbjct: 227 SNLRRLELQNNQITNIKAIASLT 249
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
++LTNL+KL L IT + +A L NLE L + SN L +A+L NL L L
Sbjct: 90 PFSSLTNLRKLSLFSHKITDLTPIANLPNLEVLVIHSNAL--TDLTPIASLNNLTDLGLI 147
Query: 87 GNQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQ 119
G +N+T + ANL L+ L I I ++
Sbjct: 148 G-RNITDIRPFANLTQLQKFTLWYSSIQNIDALK 180
>gi|342186691|emb|CCC96178.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 981
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 59/113 (52%), Gaps = 7/113 (6%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
N+ +L+VLDLS N I S LA L+ L L G I +QG++ +LE L LS
Sbjct: 58 NMEHLRVLDLSIN-EIASVDF----LARTPFLRHLYLSGNKIEHLQGISNFSSLETLCLS 112
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
N L S E L NL NL+VL L+ N+ + P+L TL+L +T I
Sbjct: 113 DN--LINSFESLENLPNLRVLSLNFNKISSFKHYGKFPSLHTLNLVGNPLTEI 163
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 30 NLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
N+ +L+ LDL I ++ LA+ L L LS N H L+G++N ++L+ L LS N
Sbjct: 58 NMEHLRVLDLSINEIASVDFLARTPFLRHLYLSGNKIEH--LQGISNFSSLETLCLSDNL 115
Query: 90 NLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
+ L NLPNL+ L L I++ + +F S
Sbjct: 116 INSFESLENLPNLRVLSLNFNKISSFKHYGKFPS 149
>gi|390594333|gb|EIN03745.1| L domain-like protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 352
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NLR L + N L LG NL+ L+L G I I+GL L NLE L
Sbjct: 147 LKNLRTLHTVYFVQNRITKIEGLEALG----ANLRSLELGGNRIRKIEGLDALSNLEELW 202
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
L N LEGLA+L L++L + N+ L NLP+L+ L L GI +++G++
Sbjct: 203 LGKNKI--TKLEGLASLKKLKILSIQSNRITKIENLENLPDLEQLYLSHNGIQSLEGLE 259
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 68/119 (57%), Gaps = 18/119 (15%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
LA+L+ L++L +I S +T++ L NL +L++L L GI +++GL L+ L
Sbjct: 214 LASLKKLKIL------SIQSNRITKIENLENLPDLEQLYLSHNGIQSLEGLEANSKLQTL 267
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
D+S+N+ L+GL++L L+ L ++ N+ +P+L+ L+ I+T++ I
Sbjct: 268 DVSNNFV--AELKGLSHLHQLEELWMNNNK---------IPDLRALESELRHISTLETI 315
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GLA+L LK L + IT I+ L L +LE L LS N SLEGL + LQ LD+S
Sbjct: 213 GLASLKKLKILSIQSNRITKIENLENLPDLEQLYLSHNGI--QSLEGLEANSKLQTLDVS 270
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
N GL++L L+ L + + I ++ ++
Sbjct: 271 NNFVAELKGLSHLHQLEELWMNNNKIPDLRALE 303
>gi|255030344|ref|ZP_05302295.1| hypothetical protein LmonL_16876 [Listeria monocytogenes LO28]
Length = 299
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 12/124 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT--IQGLAKLKNLEA 58
L N+ L + +++A+Y + L++L+KL ++G + I L+ L NL
Sbjct: 92 LKNITTLSINNINASYE---------PIQTLSSLEKLVINGENVNADIIPDLSVLSNLTF 142
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQG 117
LDLS ++N+ NL LD+S N+ +T + L NLP+L+ L + DC IT +G
Sbjct: 143 LDLSRTNIDDTIFSKISNIPNLNKLDISNNKGITKISELNNLPSLQELRVSDCQITNFKG 202
Query: 118 IQQF 121
I++F
Sbjct: 203 IEKF 206
>gi|426219355|ref|XP_004003891.1| PREDICTED: leucine-rich repeat-containing protein 31 [Ovis aries]
Length = 590
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 64/120 (53%), Gaps = 26/120 (21%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L L+ L+VLDLS N NI GSL+ + GL + +NLK L L CG++ K+++
Sbjct: 261 LPRLQNLEVLDLSINRNI-GGSLSSIAHGLKSTSNLKVLKLHSCGLSQ-------KSVKL 312
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL-----TTLGLANLPNLKTLDLRDCGIT 113
LD + Y L L+ LDLS N+ L T GLA L +L+ LDLR C +T
Sbjct: 313 LDAAFRY-----------LCELRTLDLSCNKELGGGFEDTTGLATLEHLEGLDLRQCSLT 361
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 2 ANLRYL---QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT------IQGLAK 52
A RYL + LDLS N + G GLA L +L+ LDL C +T Q +
Sbjct: 315 AAFRYLCELRTLDLSCNKELGGGFEDTTGLATLEHLEGLDLRQCSLTADDVLSLTQVIPL 374
Query: 53 LKNLEALDLSSNY----YLHGSLEGLANLTNLQVLDLSG----NQNLTTLGLA--NLPNL 102
L +L+ LDLS+N Y L L L L+ L +S ++ T L A +LP L
Sbjct: 375 LASLQELDLSANKEMGSYSENLLSRLRFLPVLKSLIISNCALESETFTALAEASIHLPAL 434
Query: 103 KTLDL 107
K ++L
Sbjct: 435 KIVNL 439
>gi|419761284|ref|ZP_14287540.1| internalin-A [Thermosipho africanus H17ap60334]
gi|407513590|gb|EKF48487.1| internalin-A [Thermosipho africanus H17ap60334]
Length = 598
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 66/122 (54%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L++LDLS+N I+ S L +L NL++L+L I+ I L+ L L+ LD
Sbjct: 131 LTKFSKLRMLDLSSNI-ISDIS----PLKDLPNLEELNLSVNKISDITPLSNLTKLKRLD 185
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
LS N + L NLTNL+ L LS N+ LANLPNL LDL + I+ I ++
Sbjct: 186 LSYNRI--SDISSLTNLTNLEELVLSYNEISDISPLANLPNLAGLDLSNNEISDISPLKD 243
Query: 121 FT 122
T
Sbjct: 244 LT 245
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 65/125 (52%), Gaps = 11/125 (8%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L +L L+ L+LS N +IT L+NLT LK+LDL I+ I L L NLE
Sbjct: 153 LKDLPNLEELNLSVNKISDIT-------PLSNLTKLKRLDLSYNRISDISSLTNLTNLEE 205
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L LS N + LANL NL LDLS N+ L +L NL+ LDL + I+ I +
Sbjct: 206 LVLSYNEI--SDISPLANLPNLAGLDLSNNEISDISPLKDLTNLELLDLAENEISDISLL 263
Query: 119 QQFTS 123
TS
Sbjct: 264 FNLTS 268
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 68/123 (55%), Gaps = 9/123 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL L+ LDLS N SLT NLTNL++L L I+ I LA L NL LD
Sbjct: 175 LSNLTKLKRLDLSYNRISDISSLT-----NLTNLEELVLSYNEISDISPLANLPNLAGLD 229
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL--RDCGITTIQGI 118
LS+N + L +LTNL++LDL+ N+ L NL +L+ L + +D + I I
Sbjct: 230 LSNNEI--SDISPLKDLTNLELLDLAENEISDISLLFNLTSLRELYVYPKDFKMKMIMFI 287
Query: 119 QQF 121
+++
Sbjct: 288 EKY 290
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 61/147 (41%), Gaps = 32/147 (21%)
Query: 1 LANLRY---LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-------------- 43
L+ L Y L+ LDLS N + S LA L L KLDL GCG
Sbjct: 379 LSGLEYAVNLESLDLS-NSEVPDLS----PLAKLPKLVKLDLSGCGIEDLSLLPNLPNLI 433
Query: 44 --------ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG 95
I+ I L K L LDLSSN + + LA LT L+ LDL N+
Sbjct: 434 SLRLSGNEISDISPLTKFSKLRMLDLSSN--IISDISPLAKLTKLRFLDLYANEVSDVSP 491
Query: 96 LANLPNLKTLDLRDCGITTIQGIQQFT 122
LA L L+ LD + I + + T
Sbjct: 492 LAKLTKLRVLDFSQNKVNDISPLVKLT 518
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 64/147 (43%), Gaps = 32/147 (21%)
Query: 1 LANLRY---LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-------------- 43
L+ L Y L+ LDLS N + S LA L L KLDL GCG
Sbjct: 62 LSGLEYAVNLESLDLS-NSEVPDLS----PLAKLPKLVKLDLSGCGIEDLSLLPNLPNLI 116
Query: 44 --------ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG 95
I+ I L K L LDLSSN + + L +L NL+ L+LS N+
Sbjct: 117 SLRLSGNEISDISPLTKFSKLRMLDLSSN--IISDISPLKDLPNLEELNLSVNKISDITP 174
Query: 96 LANLPNLKTLDLRDCGITTIQGIQQFT 122
L+NL LK LDL I+ I + T
Sbjct: 175 LSNLTKLKRLDLSYNRISDISSLTNLT 201
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L++LDLS+N I+ S LA LT L+ LDL ++ + LAKL L LD
Sbjct: 448 LTKFSKLRMLDLSSNI-ISDIS----PLAKLTKLRFLDLYANEVSDVSPLAKLTKLRVLD 502
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
S N + L LT L+VL+L N+ L+NL NL LDL I+ I +
Sbjct: 503 FSQNKV--NDISPLVKLTKLRVLELQYNKINDISPLSNLTNLIGLDLTGNKISDISPL 558
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 46 TIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
T+Q + +L+NL +L SS L GL NL+ LDLS ++ LA LP L L
Sbjct: 42 TVQDMWELENL-SLSFSS----VRDLSGLEYAVNLESLDLSNSEVPDLSPLAKLPKLVKL 96
Query: 106 DLRDCGI 112
DL CGI
Sbjct: 97 DLSGCGI 103
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 46 TIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
T+Q + +L+NL +L SS L GL NL+ LDLS ++ LA LP L L
Sbjct: 359 TVQDMWELENL-SLSFSS----VRDLSGLEYAVNLESLDLSNSEVPDLSPLAKLPKLVKL 413
Query: 106 DLRDCGI 112
DL CGI
Sbjct: 414 DLSGCGI 420
>gi|432959520|ref|XP_004086325.1| PREDICTED: uncharacterized protein LOC101155334 [Oryzias latipes]
Length = 1121
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 16/132 (12%)
Query: 1 LANLRYLQVLDLSANYNITS--GSLTRLGLANL-----------TNLKKLDLDGCGITTI 47
+A R LQ +++S N ++S G +T + L L + L+ L L CG+ ++
Sbjct: 383 VAGQRSLQEVNMSLNNRLSSSVGKVTIVALEKLPSCSLSSLVQCSQLRSLTLRRCGLKSL 442
Query: 48 QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL 107
+G+ +L+ L +DL N S AN+T+L+VL LS N+ + GL NL L+L
Sbjct: 443 EGIKQLQELSYVDLRENDI---SYVDCANMTSLRVLRLSHNKLTSIHGLNGAENLDVLEL 499
Query: 108 RDCGITTIQGIQ 119
IT + G++
Sbjct: 500 SYNSITRVAGLE 511
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ L+ L +DL N ++ + AN+T+L+ L L +T+I GL +NL+ L+
Sbjct: 445 IKQLQELSYVDLREN------DISYVDCANMTSLRVLRLSHNKLTSIHGLNGAENLDVLE 498
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
LS N + GL +L LQ L L N + T GL ++ L L+ + ++G++
Sbjct: 499 LSYNSITR--VAGLESLRRLQRLLLDHNHLINTRGLKDVCTLLHLNCASNHLEAVEGLES 556
Query: 121 FT 122
T
Sbjct: 557 ST 558
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 9/113 (7%)
Query: 7 LQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY 65
L VL+LS N S+TR+ GL +L L++L LD + +GL + L L+ +SN+
Sbjct: 494 LDVLELSYN------SITRVAGLESLRRLQRLLLDHNHLINTRGLKDVCTLLHLNCASNH 547
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
++EGL + T L LDL N L N L+ L L D I ++QG+
Sbjct: 548 L--EAVEGLESSTLLHSLDLRANNLTDPPSLNNQVLLRELHLDDNCICSLQGL 598
>gi|189094641|emb|CAQ57303.1| expression site-associated gene 8 (ESAG8) protein [Trypanosoma
brucei brucei]
Length = 630
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 7/126 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQGLAKLKNLEAL 59
+A +R L+ L LS +N+T G L +L++LD+ GC + + L L NL+ L
Sbjct: 273 IAGVRSLEKLSLSGCWNVTKGLEE---LCKFFSLRELDISGCPVLGSAVVLRNLINLKVL 329
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
+S N L GL L NL+ L+LSG +++LG +ANL NLK LD+ C + G
Sbjct: 330 SVS-NCKNFKDLNGLERLVNLEKLNLSGCHGVSSLGFVANLSNLKELDISGCESLVCFDG 388
Query: 118 IQQFTS 123
+Q +
Sbjct: 389 LQDLNN 394
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 7/113 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L L L+ L+LS + ++S +ANL+NLK+LD+ GC + GL L NLE L
Sbjct: 343 LERLVNLEKLNLSGCHGVSSLGF----VANLSNLKELDISGCESLVCFDGLQDLNNLEVL 398
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCG 111
L + ++ + NL+ ++ LDLSG + +T+L GL L L+ L L CG
Sbjct: 399 YL-RDVKSFTNVGAIKNLSKMRELDLSGCERITSLSGLETLKRLEELSLEGCG 450
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 42/105 (40%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEALDL 61
NLR + VL+LS N+ S GL LT L++L L GC ITTI + L+NL+ L
Sbjct: 506 NLRNVCVLELSCCENLDDLS----GLHCLTGLEELYLIGCEEITTIGVVGNLRNLKCLST 561
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT---LGLANLPNLK 103
L L GL L NL+ +DLSG L++ + L +LP L+
Sbjct: 562 CWCANLK-ELGGLERLVNLEKVDLSGCCGLSSSVFMELMSLPKLQ 605
>gi|189094627|emb|CAQ57287.1| expression site-associated gene 8 (ESAG8) protein [Trypanosoma
brucei brucei]
Length = 676
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQGLAKLKNLEAL 59
+ +R L+ L LS +N+T G L L++L++LD+ GC + + L L NL+ L
Sbjct: 273 IGGVRSLEKLSLSGCWNVTKGLEE---LCKLSSLRELDISGCPVLGSAVVLRNLINLKVL 329
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
+S N L GL L NL+ L+LSG +++LG +ANL NLK L++ C + G
Sbjct: 330 SVS-NCKNFKDLNGLERLVNLEKLNLSGCHGVSSLGFVANLSNLKELNISGCESLVCFDG 388
Query: 118 IQ 119
+Q
Sbjct: 389 LQ 390
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 9/113 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGC-GITTIQGLAKLKNLEA 58
L L L+ L+LS + ++S LG +ANL+NLK+L++ GC + GL L NLE
Sbjct: 343 LERLVNLEKLNLSGCHGVSS-----LGFVANLSNLKELNISGCESLVCFDGLQDLNNLEV 397
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDC 110
L L + ++ + NL+ ++ LDLSG + +T+L GL L L+ +R C
Sbjct: 398 LYLR-DVKSFTNVGAIKNLSKMRELDLSGCERITSLSGLETLKRLRKFKIRGC 449
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
+ NL L+VL +S N+ S GL LT L++L L C ITTI + L+NL+ L
Sbjct: 550 IWNLGKLRVLYVSECGNLEDLS----GLQCLTGLEELYLIVCKKITTIGVVGNLRNLKCL 605
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT---LGLANLPNLK 103
L L GL L NL+ +DLSG L++ + L +LP L+
Sbjct: 606 STCWCANLK-ELGGLERLVNLEKVDLSGCCGLSSSVFMELMSLPKLQ 651
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L NLR L++ N S +GL L L L++DG G+T I GL +LK LEAL
Sbjct: 158 LRNLRKLRMKRTMVNDMWCSS----IGL--LKFLVHLEVDGSRGVTDITGLCRLKTLEAL 211
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANL-PN--LKTLDLRDC----GI 112
L S + + + L L L L N+T L + P+ LK LD+ C +
Sbjct: 212 SLDSCINITKGFDKICALPQLTSLSLC-QTNVTDKDLRCIHPDGKLKVLDISSCHEITDL 270
Query: 113 TTIQGIQQF 121
T I G++
Sbjct: 271 TAIGGVRSL 279
>gi|258611539|ref|ZP_05233338.2| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|258601053|gb|EEW14378.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
Length = 597
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 12/124 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT--IQGLAKLKNLEA 58
L N+ L + +++A+Y + L++L+KL ++G + I L+ L NL
Sbjct: 93 LKNITTLSINNINASYE---------PIQTLSSLEKLVINGENVNADIIPDLSVLSNLTF 143
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQG 117
LDLS ++N+ NL LD+S N+ +T + L NLP+L+ L + DC IT +G
Sbjct: 144 LDLSRTNIDDTIFSKISNIPNLNKLDISNNKGITKISELNNLPSLQELRVSDCQITNFKG 203
Query: 118 IQQF 121
I++F
Sbjct: 204 IEKF 207
>gi|16803329|ref|NP_464814.1| hypothetical protein lmo1289 [Listeria monocytogenes EGD-e]
gi|386050265|ref|YP_005968256.1| internalin-like protein [Listeria monocytogenes FSL R2-561]
gi|404283780|ref|YP_006684677.1| hypothetical protein LMOSLCC2372_1350 [Listeria monocytogenes
SLCC2372]
gi|405758336|ref|YP_006687612.1| hypothetical protein LMOSLCC2479_1349 [Listeria monocytogenes
SLCC2479]
gi|16410705|emb|CAC99367.1| lmo1289 [Listeria monocytogenes EGD-e]
gi|346424111|gb|AEO25636.1| internalin-like protein [Listeria monocytogenes FSL R2-561]
gi|404233282|emb|CBY54685.1| leucine-rich repeat domain protein (LPXTG motif) [Listeria
monocytogenes SLCC2372]
gi|404236218|emb|CBY57620.1| leucine-rich repeat domain protein (LPXTG motif) [Listeria
monocytogenes SLCC2479]
Length = 593
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 12/124 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT--IQGLAKLKNLEA 58
L N+ L + +++A+Y + L++L+KL ++G + I L+ L NL
Sbjct: 93 LKNITTLSINNINASYE---------PIQTLSSLEKLVINGENVNADIIPDLSVLSNLTF 143
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQG 117
LDLS ++N+ NL LD+S N+ +T + L NLP+L+ L + DC IT +G
Sbjct: 144 LDLSRTNIDDTIFSKISNIPNLNKLDISNNKGITKISELNNLPSLQELRVSDCQITNFKG 203
Query: 118 IQQF 121
I++F
Sbjct: 204 IEKF 207
>gi|189094621|emb|CAQ57281.1| expression site-associated gene 8 (ESAG8) protein [Trypanosoma
brucei brucei]
Length = 676
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQGLAKLKNLEAL 59
+ +R L+ L LS +N+T G L L++L++LD+ GC + + L L NL+ L
Sbjct: 273 IGGVRSLEKLSLSGCWNVTKGLEE---LCKLSSLRELDISGCPVLGSAVVLRNLINLKVL 329
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
+S N L GL L NL+ L+LSG +++LG +ANL NLK L++ C + G
Sbjct: 330 SVS-NCKNFKDLNGLERLVNLEKLNLSGCHGVSSLGFVANLSNLKELNISGCESLVCFDG 388
Query: 118 IQ 119
+Q
Sbjct: 389 LQ 390
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 9/113 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGC-GITTIQGLAKLKNLEA 58
L L L+ L+LS + ++S LG +ANL+NLK+L++ GC + GL L NLE
Sbjct: 343 LERLVNLEKLNLSGCHGVSS-----LGFVANLSNLKELNISGCESLVCFDGLQDLNNLEV 397
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDC 110
L L + ++ + NL+ ++ LDLSG + +T+L GL L L+ +R C
Sbjct: 398 LYLR-DVKSFTNVGAIKNLSKMRELDLSGCERITSLSGLETLKRLRKFKIRGC 449
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
+ NL L+VL +S N+ S GL LT L++L L C ITTI + L+NL+ L
Sbjct: 550 IWNLGKLRVLYVSECGNLEDLS----GLQCLTGLEELYLIVCKKITTIGVVGNLRNLKCL 605
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT---LGLANLPNLK 103
L L GL L NL+ +DLSG L++ + L +LP L+
Sbjct: 606 STCWCANLK-ELGGLERLVNLEKVDLSGCCGLSSSVFMELMSLPKLQ 651
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L NLR L++ N S +GL L L L++DG G+T I GL +LK LEAL
Sbjct: 158 LRNLRKLRMKRTMVNDMWCSS----IGL--LKFLVHLEVDGSRGVTDITGLCRLKTLEAL 211
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANL-PN--LKTLDLRDC----GI 112
L S + + + L L L L N+T L + P+ LK LD+ C +
Sbjct: 212 SLDSCINITKGFDKICALPQLTSLSLC-QTNVTDKDLRCIHPDGKLKVLDISSCHEITDL 270
Query: 113 TTIQGIQQF 121
T I G++
Sbjct: 271 TAIGGVRSL 279
>gi|189094705|emb|CAQ57378.1| expression site-associated gene 8 (ESAG8) protein [Trypanosoma
brucei brucei]
gi|189094717|emb|CAQ57392.1| expression site-associated gene 8 (ESAG8) protein [Trypanosoma
brucei brucei]
Length = 630
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 68/126 (53%), Gaps = 7/126 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQGLAKLKNLEAL 59
+ +R L+ L LS +N+T G L ++L++LD+ GC + + L L NL+ L
Sbjct: 273 IGGMRSLEKLSLSGCWNVTKGLEE---LCKFSSLRELDISGCPVLGSAVVLRNLINLKVL 329
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
+S N L GL L NL+ L+LSG +++LG +ANL NLK LD+ C + G
Sbjct: 330 SVS-NCKNFKDLNGLERLVNLEKLNLSGCHGVSSLGFVANLSNLKELDISGCESLVCFDG 388
Query: 118 IQQFTS 123
+Q +
Sbjct: 389 LQDLNN 394
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 7/113 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L L L+ L+LS + ++S +ANL+NLK+LD+ GC + GL L NLE L
Sbjct: 343 LERLVNLEKLNLSGCHGVSSLGF----VANLSNLKELDISGCESLVCFDGLQDLNNLEVL 398
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCG 111
L + ++ + NL+ ++ LDLSG + +T+L GL L L+ L L CG
Sbjct: 399 YL-RDVKSFTNVGAIKNLSKMRELDLSGCERITSLSGLETLKRLEELSLEGCG 450
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 42/105 (40%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEALDL 61
NLR + VL+LS N+ S GL LT L++L L GC ITTI + L+NL+ L
Sbjct: 506 NLRNVCVLELSCCENLDDLS----GLHCLTGLEELYLIGCEEITTIGVVGNLRNLKCLST 561
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT---LGLANLPNLK 103
L L GL L NL+ +DLSG L++ + L +LP L+
Sbjct: 562 CWCANLK-ELGGLERLVNLEKVDLSGCCGLSSSVFMELMSLPKLQ 605
>gi|71005916|ref|XP_757624.1| hypothetical protein UM01477.1 [Ustilago maydis 521]
gi|46097011|gb|EAK82244.1| hypothetical protein UM01477.1 [Ustilago maydis 521]
Length = 1744
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 32 TNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL 91
++L+ L+L G + TI+ A L NL L L N SL+GL LTNL+VL + N+
Sbjct: 748 SSLQSLELGGNRLRTIENFAHLTNLTQLWLGKNKIT--SLQGLETLTNLRVLSIQSNRIT 805
Query: 92 TTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
GL L NL+ L + G+T ++G+Q
Sbjct: 806 KLEGLEKLVNLQELYISHNGLTKLEGLQH 834
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL LTNL+ L + IT ++GL KL NL+ L +S N LEGL + L LD+
Sbjct: 787 GLETLTNLRVLSIQSNRITKLEGLEKLVNLQELYISHNGLT--KLEGLQHNVKLTTLDVG 844
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
N + +L L+ D IT + G+ +
Sbjct: 845 ANMIEKVENVGHLSLLQEFWANDNKITDLNGLDK 878
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 46/139 (33%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN-----------------YYLHG---- 69
LT L+ LDL I I GL +L LE+LDLS N Y++
Sbjct: 677 LTELQDLDLYDNSIEKISGLDELTKLESLDLSFNNIHHISNISHLGQCKTIYFVQNKISR 736
Query: 70 -------------------------SLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKT 104
++E A+LTNL L L N+ + GL L NL+
Sbjct: 737 VRPDDFQGPIASSLQSLELGGNRLRTIENFAHLTNLTQLWLGKNKITSLQGLETLTNLRV 796
Query: 105 LDLRDCGITTIQGIQQFTS 123
L ++ IT ++G+++ +
Sbjct: 797 LSIQSNRITKLEGLEKLVN 815
>gi|189094695|emb|CAQ57366.1| expression site-associated gene 8 (ESAG8) protein [Trypanosoma
brucei brucei]
Length = 630
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 68/126 (53%), Gaps = 7/126 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQGLAKLKNLEAL 59
+ +R L+ L LS +N+T G L ++L++LD+ GC + + L L NL+ L
Sbjct: 273 IGGMRSLEKLSLSGCWNVTKGLEE---LCKFSSLRELDISGCPVLGSAVVLRNLINLKVL 329
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
+S N L GL L NL+ L+LSG +++LG +ANL NLK LD+ C + G
Sbjct: 330 SVS-NCKNFKDLNGLERLVNLEKLNLSGCHGVSSLGFVANLSNLKELDISGCESLVCFDG 388
Query: 118 IQQFTS 123
+Q +
Sbjct: 389 LQDLNN 394
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 7/113 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L L L+ L+LS + ++S +ANL+NLK+LD+ GC + GL L NLE L
Sbjct: 343 LERLVNLEKLNLSGCHGVSSLGF----VANLSNLKELDISGCESLVCFDGLQDLNNLEVL 398
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCG 111
L + ++ + NL+ ++ LDLSG + +T+L GL L L+ L L CG
Sbjct: 399 YL-RDVKSFTNVGAIKNLSKMRELDLSGCERITSLSGLETLKRLEELSLEGCG 450
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 42/105 (40%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEALDL 61
NLR + VL+LS N+ S GL LT L++L L GC ITTI + L+NL+ L
Sbjct: 506 NLRNVCVLELSCCENLDDLS----GLHCLTGLEELYLIGCEEITTIGVVGNLRNLKCLST 561
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT---LGLANLPNLK 103
L L GL L NL+ +DLSG L++ + L +LP L+
Sbjct: 562 CWCANLK-ELGGLERLVNLEKVDLSGCCGLSSSVFMELMSLPKLQ 605
>gi|428304293|ref|YP_007141118.1| hypothetical protein Cri9333_0672 [Crinalium epipsammum PCC 9333]
gi|428245828|gb|AFZ11608.1| leucine-rich repeat-containing protein [Crinalium epipsammum PCC
9333]
Length = 353
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 11/120 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
LANL+ L +L+++++ NI L+ L+NL+KL+L IT I+ ++ L NL++
Sbjct: 201 LANLKTLAILEVNSSKVKNIQ-------PLSGLSNLRKLELQNNQITNIKAISSLTNLKS 253
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L L+ N L L+NL L + LS NQ + LA L +L+T+ L++ IT+IQ +
Sbjct: 254 LKLNRNQI--WDLRSLSNLKKLVSISLSHNQIVDVTPLAALTDLETISLQNNRITSIQSL 311
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
LANL L L+++ + IQ L+ L NL L+L +N +++ +++LTNL+ L L+
Sbjct: 200 SLANLKTLAILEVNSSKVKNIQPLSGLSNLRKLELQNNQI--TNIKAISSLTNLKSLKLN 257
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L+NL L ++ L I + + T
Sbjct: 258 RNQIWDLRSLSNLKKLVSISLSHNQIVDVTPLAALT 293
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 27/143 (18%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKL------ 53
+ANL L+VL I S +LT L +A+L NL L L G IT I+ A L
Sbjct: 113 IANLPNLEVLV------IHSNALTDLTPIASLNNLTDLGLIGRNITDIRPFANLTQLQKF 166
Query: 54 -------KNLEALD----LSSNYYLH---GSLEGLANLTNLQVLDLSGNQNLTTLGLANL 99
+N++AL L+ +++ L LANL L +L+++ ++ L+ L
Sbjct: 167 TLWYSSIQNIDALKDLIQLTEVSFINTQISDLSSLANLKTLAILEVNSSKVKNIQPLSGL 226
Query: 100 PNLKTLDLRDCGITTIQGIQQFT 122
NL+ L+L++ IT I+ I T
Sbjct: 227 SNLRKLELQNNQITNIKAISSLT 249
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
++LTNL+KL L IT + +A L NLE L + SN L +A+L NL L L
Sbjct: 90 PFSSLTNLRKLSLFSHKITDLTPIANLPNLEVLVIHSNAL--TDLTPIASLNNLTDLGLI 147
Query: 87 GNQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQ 119
G +N+T + ANL L+ L I I ++
Sbjct: 148 G-RNITDIRPFANLTQLQKFTLWYSSIQNIDALK 180
>gi|357128153|ref|XP_003565740.1| PREDICTED: probable inactive receptor kinase At4g23740-like
[Brachypodium distachyon]
Length = 637
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 45/108 (41%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L LQVL L AN + LGL +LT L L L+ T GLA+L++L+ LD
Sbjct: 89 LGRLTALQVLSLRANSLSGAFPDELLGLPDLTGLH-LQLNAFSGTVPPGLARLRSLQVLD 147
Query: 61 LSSNYYLHGSLEG-LANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL 107
LS N + +G+L G L+NLT L L+LS N + LP L+ L+L
Sbjct: 148 LSFNDF-NGTLPGELSNLTQLAALNLSNNSLSGRVPDLGLPQLQFLNL 194
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 20 SGSLTRLGLANLTNLKKLDLDGCGITTI--QGLAKLKNLEALDLSSNYYLHGSLEGLANL 77
SG + R L LT L+ L L ++ L L +L L L N + GLA L
Sbjct: 81 SGPVPRGTLGRLTALQVLSLRANSLSGAFPDELLGLPDLTGLHLQLNAFSGTVPPGLARL 140
Query: 78 TNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRD 109
+LQVLDLS N TL L+NL L L+L +
Sbjct: 141 RSLQVLDLSFNDFNGTLPGELSNLTQLAALNLSN 174
>gi|343033660|gb|AEL79556.1| esag8 [Trypanosoma brucei TREU927]
Length = 456
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 74/131 (56%), Gaps = 14/131 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L NL L+VL +S N + GL L NL+KL+L GC G++++ +A L NL+ L
Sbjct: 320 LKNLINLKVLSVSNCKNFKDLN----GLERLVNLEKLNLSGCHGVSSLAFVANLSNLKEL 375
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-------G 111
++S L +GL +L NL+VL L ++ T +G + NL ++ LDL C G
Sbjct: 376 NISGCESLV-CFDGLQDLNNLEVLYLRDVKSFTNVGAIKNLSKMRELDLSGCERITSLSG 434
Query: 112 ITTIQGIQQFT 122
+ T++G+++ +
Sbjct: 435 LETLKGLEELS 445
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 7/113 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L L L+ L+LS + ++S + +ANL+NLK+L++ GC + GL L NLE L
Sbjct: 343 LERLVNLEKLNLSGCHGVSSLAF----VANLSNLKELNISGCESLVCFDGLQDLNNLEVL 398
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCG 111
L + ++ + NL+ ++ LDLSG + +T+L GL L L+ L L CG
Sbjct: 399 YL-RDVKSFTNVGAIKNLSKMRELDLSGCERITSLSGLETLKGLEELSLEGCG 450
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 23/133 (17%)
Query: 1 LANLRYLQVLDLSANYNITSG--------SLTRLGLA--NLTN-----------LKKLDL 39
L L+ L+ L L NIT G LT L L N+T+ LK LD+
Sbjct: 202 LCRLKTLEALSLDNCINITKGFDKICALPQLTSLSLCQTNVTDKDLRCIHPDGKLKVLDI 261
Query: 40 DGCG-ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL-TTLGLA 97
C IT + +A +++LE L LS + + LE L +NL+ LD+SG L + + L
Sbjct: 262 SSCHEITDLTAIAGVRSLEKLSLSGCWNVTKGLEELCKFSNLRELDISGCLVLGSAVVLK 321
Query: 98 NLPNLKTLDLRDC 110
NL NLK L + +C
Sbjct: 322 NLINLKVLSVSNC 334
>gi|366047672|gb|AEX08463.1| expression site-associated protein 8 [Trypanosoma brucei gambiense]
Length = 450
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQGLAKLKNLEAL 59
+ +R L+ L LS +N+T G L +NL++LD+ GC + + L L NL+ L
Sbjct: 47 IGGVRSLEKLSLSGCWNVTKGLEE---LCKFSNLRELDISGCLVLGSAVVLRNLINLKVL 103
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLA-NLPNLKTLDLRDC-GITTIQG 117
+S N L GL L NL+ L+LSG +++LG NL NLK LD+ C + G
Sbjct: 104 SVS-NCKNFKDLNGLERLVNLEKLNLSGCHGVSSLGFVENLSNLKELDISGCESLVCFDG 162
Query: 118 IQ 119
+Q
Sbjct: 163 LQ 164
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLA-NLTNLKKLDLDGC-GITTIQGLAKLKNLEA 58
L L L+ L+LS + ++S LG NL+NLK+LD+ GC + GL L NLE
Sbjct: 117 LERLVNLEKLNLSGCHGVSS-----LGFVENLSNLKELDISGCESLVCFDGLQDLNNLEV 171
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDC 110
L L + ++ + NL+ ++ LDLSG + +T+L GL L L+ +R C
Sbjct: 172 LYLR-DVKSFTNVGAIKNLSKMRELDLSGCERITSLSGLETLKRLRKFKIRGC 223
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 33 NLKKLDLDGCG-ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL 91
LK LD+ C IT + + +++LE L LS + + LE L +NL+ LD+SG L
Sbjct: 29 KLKVLDISSCHEITDLTAIGGVRSLEKLSLSGCWNVTKGLEELCKFSNLRELDISGCLVL 88
Query: 92 -TTLGLANLPNLKTLDLRDC 110
+ + L NL NLK L + +C
Sbjct: 89 GSAVVLRNLINLKVLSVSNC 108
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
+ NL L+VL +S N+ S GL LT L++L L C ITTI + L+NL+ L
Sbjct: 324 IWNLGKLRVLYVSECGNLEDLS----GLQCLTGLEELYLIVCKKITTIGVVGNLRNLKCL 379
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT---LGLANLPNLKTL 105
L L GL L NL+ +DLSG L++ + L +LP L+
Sbjct: 380 STCWCANLK-ELGGLERLVNLEKVDLSGCCGLSSSVFMELMSLPKLQWF 427
>gi|28555894|emb|CAD45029.1| NBS-LRR disease resistance protein homologue [Hordeum vulgare]
Length = 1262
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI--TTIQGLAKLKNLEALDL 61
LR LQ LDLS + S + L ++ NL++L+L C + L LK+++ LDL
Sbjct: 657 LRNLQTLDLSWCEKLESLPES---LGSVQNLQRLNLSNCFELEALPESLGSLKDVQTLDL 713
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDC 110
SS Y L E L +L N+Q LDLS L +L L L NL+T+DL C
Sbjct: 714 SSCYKLESLPESLGSLKNVQTLDLSRCYKLVSLPKNLGRLKNLRTIDLSGC 764
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG--ITTIQGLAKLKNLEA 58
L +L+ +Q LDLS+ Y + S + L +L N++ LDL C ++ + L +LKNL
Sbjct: 702 LGSLKDVQTLDLSSCYKLESLPES---LGSLKNVQTLDLSRCYKLVSLPKNLGRLKNLRT 758
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDC 110
+DLS L E +L NLQ+L+LS L +L +L NL+TL+L +C
Sbjct: 759 IDLSGCKKLETFPESFGSLENLQILNLSNCFELESLPESFGSLKNLQTLNLVEC 812
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 59/117 (50%), Gaps = 13/117 (11%)
Query: 1 LANLRYLQVLDLSANYNITS-----GSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKN 55
+L LQ+L+LS + + S GSL L NL KKL+ + + L LKN
Sbjct: 774 FGSLENLQILNLSNCFELESLPESFGSLKNLQTLNLVECKKLE------SLPESLGGLKN 827
Query: 56 LEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDC 110
L+ LD S + L E L L NLQ L LS NL +L L +L NL+TLDL C
Sbjct: 828 LQTLDFSVCHKLESVPESLGGLNNLQTLKLSVCDNLVSLLKSLGSLKNLQTLDLSGC 884
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI--TTIQGLAKLKNLEA 58
L +L+ +Q LDLS Y + S L + L L NL+ +DL GC T + L+NL+
Sbjct: 726 LGSLKNVQTLDLSRCYKLVS--LPK-NLGRLKNLRTIDLSGCKKLETFPESFGSLENLQI 782
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDC 110
L+LS+ + L E +L NLQ L+L + L +L L L NL+TLD C
Sbjct: 783 LNLSNCFELESLPESFGSLKNLQTLNLVECKKLESLPESLGGLKNLQTLDFSVC 836
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 65/117 (55%), Gaps = 13/117 (11%)
Query: 1 LANLRYLQVLDLSANYNITS-----GSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKN 55
L +++ L L+LS +N+ S GSL L + NL+N KL+ + + L LKN
Sbjct: 1086 LGSIKNLHTLNLSVCHNLESIPESVGSLENLQILNLSNCFKLE------SIPKSLGSLKN 1139
Query: 56 LEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDC 110
L+ L LS L + L NL NLQ LDLSG + L +L L +L NL+TL+L +C
Sbjct: 1140 LQTLILSWCTRLVSLPKNLGNLKNLQTLDLSGCKKLESLPDSLGSLENLQTLNLSNC 1196
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG--ITTIQGLAKLKNLEA 58
L L+ LQ LD S + + S L L NL+ L L C ++ ++ L LKNL+
Sbjct: 822 LGGLKNLQTLDFSVCHKLES---VPESLGGLNNLQTLKLSVCDNLVSLLKSLGSLKNLQT 878
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDC 110
LDLS L E L +L NLQ+L+LS L +L L L NL+TL++ C
Sbjct: 879 LDLSGCKKLESLPESLGSLENLQILNLSNCFKLESLPESLGRLKNLQTLNISWC 932
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 62/135 (45%), Gaps = 25/135 (18%)
Query: 1 LANLRYLQVLDLSANYNITS--GSLTRLG-------------------LANLTNLKKLDL 39
L +L LQ+L+LS + + S SL RL L NL NL +LDL
Sbjct: 894 LGSLENLQILNLSNCFKLESLPESLGRLKNLQTLNISWCTELVFLPKNLGNLKNLPRLDL 953
Query: 40 DGCGI--TTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--G 95
GC + L L+NLE L+LS + L E L L NLQ LDL L +L
Sbjct: 954 SGCMKLESLPDSLGSLENLETLNLSKCFKLESLPESLGGLQNLQTLDLLVCHKLESLPES 1013
Query: 96 LANLPNLKTLDLRDC 110
L L NL+TL L C
Sbjct: 1014 LGGLKNLQTLQLSFC 1028
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 7/115 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG--ITTIQGLAKLKNLEA 58
+ +L LQ+L+LS + + S L +L NL+ L L C ++ + L LKNL+
Sbjct: 1110 VGSLENLQILNLSNCFKLES---IPKSLGSLKNLQTLILSWCTRLVSLPKNLGNLKNLQT 1166
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCG 111
LDLS L + L +L NLQ L+LS L +L L +L L+TL+L CG
Sbjct: 1167 LDLSGCKKLESLPDSLGSLENLQTLNLSNCFKLESLPEILGSLKKLQTLNLFRCG 1221
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI--TTIQGLAKLKNLEA 58
L +L L+ L+LS + + S + L L NL+ LDL C + + L LKNL+
Sbjct: 966 LGSLENLETLNLSKCFKLESLPES---LGGLQNLQTLDLLVCHKLESLPESLGGLKNLQT 1022
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDC 110
L LS + L E L L NLQ L LS L +L L +L NL TL L+ C
Sbjct: 1023 LQLSFCHKLESLPESLGGLKNLQTLTLSVCDKLESLPESLGSLKNLHTLKLQVC 1076
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 7/114 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI--QGLAKLKNLEA 58
+ L L L+LS + I+ + L +L LDL C + + L L+NL+
Sbjct: 606 ITRLSKLHYLNLSGSRGISE---IPSSVGKLVSLVHLDLSYCTNVKVIPKALGILRNLQT 662
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDC 110
LDLS L E L ++ NLQ L+LS L L L +L +++TLDL C
Sbjct: 663 LDLSWCEKLESLPESLGSVQNLQRLNLSNCFELEALPESLGSLKDVQTLDLSSC 716
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI--TTIQGLAKLKNLEA 58
L L+ LQ L LS + S + L +L NL L L C + + L +KNL
Sbjct: 1038 LGGLKNLQTLTLSVCDKLESLPES---LGSLKNLHTLKLQVCYKLKSLPESLGSIKNLHT 1094
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDC 110
L+LS + L E + +L NLQ+L+LS L ++ L +L NL+TL L C
Sbjct: 1095 LNLSVCHNLESIPESVGSLENLQILNLSNCFKLESIPKSLGSLKNLQTLILSWC 1148
>gi|168028613|ref|XP_001766822.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682031|gb|EDQ68453.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1191
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Query: 26 LGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
+GL++ TNL+ L L G I IQGL L L +L+LSSN +EGL+ L +L+VL+L
Sbjct: 82 IGLSDFTNLQTLSLHGNQIELIQGLEVLHKLISLNLSSNKIT--LMEGLSQLKSLRVLNL 139
Query: 86 SGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
S N+ GL L +++ L L I+ + G+
Sbjct: 140 SNNRIKEIKGLKGLVSIRKLILSHNQISLLGGLSSL 175
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L L L+L IT ++GL++LK+L L+LS+N ++GL L +++ L LS
Sbjct: 105 GLEVLHKLISLNLSSNKITLMEGLSQLKSLRVLNLSNNRI--KEIKGLKGLVSIRKLILS 162
Query: 87 GNQNLTTLGLANLP----NLKTLDLRD 109
NQ GL++L +L+ LDLRD
Sbjct: 163 HNQISLLGGLSSLQGPSYSLQYLDLRD 189
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 73 GLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
GL++ TNLQ L L GNQ GL L L +L+L IT ++G+ Q S
Sbjct: 83 GLSDFTNLQTLSLHGNQIELIQGLEVLHKLISLNLSSNKITLMEGLSQLKS 133
>gi|18413547|emb|CAD21879.1| ESAG8 protein [Trypanosoma brucei]
Length = 630
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQGLAKLKNLEAL 59
+ +R L+ L LS +N+T G L L++L++LD+ GC + + L L NL+ L
Sbjct: 273 IGGVRSLEKLSLSGCWNVTKGLEE---LCKLSSLRELDISGCPVLGSAVVLRNLINLKVL 329
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
+S N L GL L NL+ L+LSG +++LG +ANL NLK L++ C + G
Sbjct: 330 SVS-NCKNFKDLNGLERLVNLEKLNLSGCHGVSSLGFVANLSNLKELNISGCESLVCFDG 388
Query: 118 IQ 119
+Q
Sbjct: 389 LQ 390
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 8/122 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L NL L+VL +S N + GL L NL+KL+L GC G++++ +A L NL+ L
Sbjct: 320 LRNLINLKVLSVSNCKNFKDLN----GLERLVNLEKLNLSGCHGVSSLGFVANLSNLKEL 375
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCG-ITTIQG 117
++S L +GL +L NL+VL L ++ T +G + NL ++ LDL C IT++ G
Sbjct: 376 NISGCESLV-CFDGLQDLNNLEVLYLRDVKSFTNVGAIKNLSKMRELDLSGCERITSLSG 434
Query: 118 IQ 119
++
Sbjct: 435 LE 436
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
+ NL ++ LDLS ITS S GL L L++L L+GCG I + + L +L L
Sbjct: 412 IKNLSKMRELDLSGCERITSLS----GLETLKRLEELSLEGCGEIMSFDPIWSLHHLRVL 467
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
+S L L GL LT L+ L L G + T G + NL N+ L+L C + + G
Sbjct: 468 YVSECGNLE-DLSGLQCLTGLEELYLHGCRKCTNFGSIWNLRNVCVLELSCCENLEDLSG 526
Query: 118 IQQFT 122
+Q T
Sbjct: 527 LQCLT 531
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
+ NLR + VL+LS N+ S GL LT L++L L GC ITTI + L+NL+ L
Sbjct: 504 IWNLRNVCVLELSCCENLEDLS----GLQCLTGLEELYLIGCEEITTIGVVGNLRNLKCL 559
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT---LGLANLPNLK 103
L L GL L NL+ LDLSG L++ + L +LP L+
Sbjct: 560 STCWCANLK-ELGGLERLVNLEKLDLSGCCGLSSSVFMELMSLPKLQ 605
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 60/135 (44%), Gaps = 30/135 (22%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
+ +L +L+VL +S N+ S GL LT L++L L GC T + L+N+ L
Sbjct: 458 IWSLHHLRVLYVSECGNLEDLS----GLQCLTGLEELYLHGCRKCTNFGSIWNLRNVCVL 513
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG------------------------ 95
+LS L L GL LT L+ L L G + +TT+G
Sbjct: 514 ELSCCENLE-DLSGLQCLTGLEELYLIGCEEITTIGVVGNLRNLKCLSTCWCANLKELGG 572
Query: 96 LANLPNLKTLDLRDC 110
L L NL+ LDL C
Sbjct: 573 LERLVNLEKLDLSGC 587
>gi|256079299|ref|XP_002575926.1| protein phosphatases pp1 regulatory subunit [Schistosoma mansoni]
gi|360044875|emb|CCD82423.1| putative protein phosphatases pp1 regulatory subunit [Schistosoma
mansoni]
Length = 327
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 21/127 (16%)
Query: 14 ANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH---- 68
N +++ + R+ L NL+NL+KL I+ I+ L+ LK+LE L+L SN
Sbjct: 102 TNLDLSFNRIKRIENLENLSNLRKLYFVNNHISKIENLSNLKDLEMLELGSNKIRKLENL 161
Query: 69 ----------------GSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGI 112
++E L NLTNL +L + GN+ GLA+L NL+ L L + GI
Sbjct: 162 DELEKLTQLYCGKNKIPAIENLDNLTNLTILSIQGNRLTKINGLASLVNLEQLYLSENGI 221
Query: 113 TTIQGIQ 119
T I+G++
Sbjct: 222 TEIEGLE 228
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 18 ITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
I LT++ GLA+L NL++L L GIT I+GL L L+ LDL+ N+ ++ ++N
Sbjct: 194 IQGNRLTKINGLASLVNLEQLYLSENGITEIEGLETLSKLQILDLAYNFI--SQIQNMSN 251
Query: 77 LTNLQVLDLSGNQ--NLTTLG-LANLPNLKTL 105
L NL+ + N+ + LG L+ L L+TL
Sbjct: 252 LVNLEEFWCNDNKISDWEQLGKLSVLKKLRTL 283
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 58/121 (47%), Gaps = 13/121 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG---ITTIQGLAKLKNLE 57
L+NL+ L++L+L GS L NL L+KL CG I I+ L L NL
Sbjct: 139 LSNLKDLEMLEL--------GSNKIRKLENLDELEKLTQLYCGKNKIPAIENLDNLTNLT 190
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQG 117
L + N + GLA+L NL+ L LS N GL L L+ LDL I+ IQ
Sbjct: 191 ILSIQGNRL--TKINGLASLVNLEQLYLSENGITEIEGLETLSKLQILDLAYNFISQIQN 248
Query: 118 I 118
+
Sbjct: 249 M 249
>gi|418744888|ref|ZP_13301233.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
gi|410794219|gb|EKR92129.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
Length = 481
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 68/120 (56%), Gaps = 13/120 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTI-QGLAKLKNLE 57
+ NL+ LQ LDL N LT L + NL NL+ LDL +TT+ + + L+NL+
Sbjct: 100 IGNLQNLQTLDLGRN------QLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQ 153
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
LDL N L E + NL NLQ LDL GNQ L TL + NL NL+TLDL +TT+
Sbjct: 154 TLDLGRNQ-LTTLPEEIGNLQNLQTLDLEGNQ-LATLPEEIGNLQNLQTLDLEGNQLTTL 211
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 28 LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+ L NL+ LDL + T+ + + KL+NL+ LDLS N E + L NLQ L+L+
Sbjct: 31 IGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKE-IGQLQNLQKLNLN 89
Query: 87 GNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
NQ LTTL + NL NL+TLDL +TT+
Sbjct: 90 SNQ-LTTLSKEIGNLQNLQTLDLGRNQLTTL 119
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ NL+ LQ L+L++N T + NL L+KL L +TT+ + + L+NL+ L
Sbjct: 307 IGNLQNLQDLNLNSNQFTTLPK----EIWNLQKLQKLSLGRNQLTTLPEEIWNLQNLKTL 362
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL 94
DL N L E + NL NLQ LDL GNQ LTTL
Sbjct: 363 DLEGNQ-LATLPEEIGNLQNLQKLDLEGNQ-LTTL 395
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 45 TTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNL 102
T + + KL+NL LDLSSN + E + L NLQ LDLS NQ LTTL + L NL
Sbjct: 26 TLPKEIGKLQNLRDLDLSSNQLMTLPKE-IGKLQNLQKLDLSHNQ-LTTLPKEIGQLQNL 83
Query: 103 KTLDLRDCGITTI 115
+ L+L +TT+
Sbjct: 84 QKLNLNSNQLTTL 96
>gi|298705630|emb|CBJ28878.1| Hypothetical leucine rich repeat protein [Ectocarpus siliculosus]
Length = 848
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 32 TNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL 91
T+LK L L G GI+ IQG+ L L L L N L +++GL L L LDLS N+
Sbjct: 92 TSLKALWLGGNGISEIQGIGHLSQLRCLYLERN--LISTIKGLEGLERLVQLDLSQNRIE 149
Query: 92 TTLGLANLPNLKTLDL 107
LGL+ LP+L TL+L
Sbjct: 150 AALGLSCLPSLHTLNL 165
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 13/88 (14%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G+ +L+ L+ L L+ I+TI+GL L+ L LDLS N + +L GL+ L +L L+LS
Sbjct: 109 GIGHLSQLRCLYLERNLISTIKGLEGLERLVQLDLSQN-RIEAAL-GLSCLPSLHTLNLS 166
Query: 87 GNQNLTTLG-------LANLPNLKTLDL 107
N +LG L+ P L LD+
Sbjct: 167 KN----SLGDAAAVSPLSECPALTNLDV 190
>gi|124002318|ref|ZP_01687171.1| leucine-rich protein [Microscilla marina ATCC 23134]
gi|123992147|gb|EAY31515.1| leucine-rich protein [Microscilla marina ATCC 23134]
Length = 1282
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L +L L+KLDL G IT I+ L L+ LE LDL + ++E L LT LQ L+L
Sbjct: 411 LGHLIKLRKLDLGGLAITKIENLEGLRTLEQLDLGGSQI--ETIENLEGLTGLQKLELRA 468
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
+ L +LP L LDL + IT I+G+
Sbjct: 469 TKVSKIENLNHLPALTELDLSETAITKIEGL 499
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 18 ITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
++S SL R+ L +L +L+ LDL I I+ LA L L LDL N + G +EGL N
Sbjct: 158 LSSNSLERVENLNHLKHLQNLDLRENNIKKIENLAGLTALTRLDLGYNGF--GKIEGLHN 215
Query: 77 LTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
L L+ L+L N L +LP LK+L+LR ++ + T
Sbjct: 216 LPRLKQLELEENDIKKIENLHHLPQLKSLNLRFNSFEKLENLDALTE 262
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 18 ITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
+ S+ R+ +A+LTNL+ LDL+ I I+ L L LE L+L N ++E + N
Sbjct: 92 LRENSIDRIENIAHLTNLQYLDLEENDIEVIENLDHLARLEYLNLRGN-----AIEKIGN 146
Query: 77 ---LTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
LT L L+LS N L +L +L+ LDLR+ I I+ + T+
Sbjct: 147 LNALTQLVHLELSSNSLERVENLNHLKHLQNLDLRENNIKKIENLAGLTA 196
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 14 ANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLE 72
A N++ L ++ LA +T L +LDL I+ I+ L LE LDLS N LE
Sbjct: 594 AELNLSQNQLIKVEHLAGVTGLTELDLSENNISKIENFEDLPALETLDLSYNKI--TRLE 651
Query: 73 GLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
L L NL+ +++ NQ A L+ LDL I+TI+ + FT
Sbjct: 652 NLTALPNLREVNIYQNQITEIATDAVTRQLQELDLEQNQISTIEILVNFT 701
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L L LK+LDL+ IT IQ A L L+LS N + +E LA +T L LDLS
Sbjct: 565 LRGLPALKELDLNNNQITHIQPNALPTQLAELNLSQNQLI--KVEHLAGVTGLTELDLSE 622
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
N +LP L+TLDL IT ++ +
Sbjct: 623 NNISKIENFEDLPALETLDLSYNKITRLENL 653
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LTNL KL +DG + I+ L L L+ L L N +E L +L L+ LDL G
Sbjct: 367 LEALTNLTKLRVDGNKVAKIENLDNLTQLDDLMLGGNPI--SKIENLGHLIKLRKLDLGG 424
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
L + NL L+TL+ D G + I+ I+
Sbjct: 425 ---LAITKIENLEGLRTLEQLDLGGSQIETIE 453
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 52/111 (46%), Gaps = 24/111 (21%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVL---- 83
L +L L +LDL IT I+GL L+ L+ L LS N +E LA L+ L+ L
Sbjct: 477 LNHLPALTELDLSETAITKIEGLTGLEGLKELSLSKNKI--TKIENLAGLSKLEKLSLCA 534
Query: 84 -DLSGNQNLTTLG-----------------LANLPNLKTLDLRDCGITTIQ 116
+LS +NLT L L LP LK LDL + IT IQ
Sbjct: 535 SNLSKIENLTGLPKLRELCLEKNAIECLENLRGLPALKELDLNNNQITHIQ 585
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LT L L L I+ I+ L L NL L + N +E L NLT L L L G
Sbjct: 345 LEALTQLTSLSLHATKISKIENLEALTNLTKLRVDGNKV--AKIENLDNLTQLDDLMLGG 402
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
N L +L L+ LDL IT I+ ++
Sbjct: 403 NPISKIENLGHLIKLRKLDLGGLAITKIENLE 434
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 32 TNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL 91
T L +L+L + ++ LA + L LDLS N +E +L L+ LDLS N+
Sbjct: 591 TQLAELNLSQNQLIKVEHLAGVTGLTELDLSENNI--SKIENFEDLPALETLDLSYNKIT 648
Query: 92 TTLGLANLPNLKTLDLRDCGITTI 115
L LPNL+ +++ IT I
Sbjct: 649 RLENLTALPNLREVNIYQNQITEI 672
>gi|46447096|ref|YP_008461.1| hypothetical protein pc1462 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400737|emb|CAF24186.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 870
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 79/135 (58%), Gaps = 15/135 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITT--IQGLAKLKNLE 57
L L L+ LDLS Y+++S L + L++L NL+ L+L GC G+ ++ L L NL+
Sbjct: 659 LTTLVNLEHLDLSGCYSLSSFKL--IFLSSLVNLQHLNLSGCFGLYHDGLEDLTPLMNLQ 716
Query: 58 ALDLSSNYYLHGSLEGLANLTNL-----QVLDLSGNQNLTTLGLANLPNL---KTLDLRD 109
LDLSS L + +GLA LT+L Q LDLSG + +T GLA+L +L + LDL
Sbjct: 717 YLDLSSCINL--TDKGLAYLTSLVGLGLQHLDLSGCKEITDTGLAHLTSLVGLEYLDLSW 774
Query: 110 CGITTIQGIQQFTSY 124
C T +G+ TS+
Sbjct: 775 CENLTDKGLAYLTSF 789
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 72/135 (53%), Gaps = 16/135 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLT---NLKKLDLDGC-GITTIQ--GLAKLK 54
LA+L L+ L L+ I G GLA+LT NL+ LDL GC +++ + L+ L
Sbjct: 633 LAHLSALRHLSLNDCRRIYHG----YGLAHLTTLVNLEHLDLSGCYSLSSFKLIFLSSLV 688
Query: 55 NLEALDLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN-----LKTLDLR 108
NL+ L+LS + L H LE L L NLQ LDLS NLT GLA L + L+ LDL
Sbjct: 689 NLQHLNLSGCFGLYHDGLEDLTPLMNLQYLDLSSCINLTDKGLAYLTSLVGLGLQHLDLS 748
Query: 109 DCGITTIQGIQQFTS 123
C T G+ TS
Sbjct: 749 GCKEITDTGLAHLTS 763
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 69/134 (51%), Gaps = 13/134 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L L+ LDLS N+T L L ++L L+ L L C T GLA L +L AL+
Sbjct: 480 LTPLTALKHLDLSECKNLTDDGLVHL--SSLVALQYLSLKLCENLTDAGLAHLTSLTALE 537
Query: 61 -----LSSNYYLHGSLEGLANL---TNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRD 109
L Y + + +GLA+L T L+ LDLS +NLT GLA+L + LK LDL
Sbjct: 538 HLDLGLDFGYCQNLTDDGLAHLSSLTALKHLDLSWRENLTDAGLAHLTSLTALKHLDLSW 597
Query: 110 CGITTIQGIQQFTS 123
C T +G+ T
Sbjct: 598 CENLTDEGLAYLTP 611
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 72/137 (52%), Gaps = 21/137 (15%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNL-----KKLDLDGCGITTIQGLAKLKN 55
L L LQ LDLS+ N+T GLA LT+L + LDL GC T GLA L +
Sbjct: 709 LTPLMNLQYLDLSSCINLTDK-----GLAYLTSLVGLGLQHLDLSGCKEITDTGLAHLTS 763
Query: 56 ---LEALDLSSNYYLHGSLEGLANLTN---LQVLDLSGNQNLTTLGLANLPNLKT---LD 106
LE LDLS L + +GLA LT+ L+ L+L G + +T GLA+L +L T L+
Sbjct: 764 LVGLEYLDLSWCENL--TDKGLAYLTSFAGLKYLNLKGCKKITDAGLAHLTSLVTLQRLN 821
Query: 107 LRDCGITTIQGIQQFTS 123
L +C T G+ S
Sbjct: 822 LSECVNLTDTGLAHLVS 838
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL---DLSS 63
++ L+LS T L L N NLK L L GLA L +L AL DLS
Sbjct: 336 IEELNLSGKDFFTEAHF--LALKNCKNLKVLCLKIFYTPIDTGLAHLTSLTALQNLDLSE 393
Query: 64 NYYLHGS-LEGLANLTNLQVLDLSGNQNLTTLGLANLP---NLKTLDLRDCGITTIQGIQ 119
Y L + L L++LT LQ LDLSG +LT GLA+L +L+ LDL C T G+
Sbjct: 394 CYLLKDTGLAHLSSLTALQYLDLSGCDDLTDAGLAHLTPLVSLQHLDLSKCENLTGDGLA 453
Query: 120 QFTS 123
T
Sbjct: 454 HLTP 457
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 57/122 (46%), Gaps = 9/122 (7%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDL----S 62
LQ LDLS IT L L +L L+ LDL C T +GLA L + L
Sbjct: 742 LQHLDLSGCKEITDTGLAHL--TSLVGLEYLDLSWCENLTDKGLAYLTSFAGLKYLNLKG 799
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLAN---LPNLKTLDLRDCGITTIQGIQ 119
L L +L LQ L+LS NLT GLA+ L NL+ L+LR+C T G+
Sbjct: 800 CKKITDAGLAHLTSLVTLQRLNLSECVNLTDTGLAHLVSLVNLQDLELRECKSITDTGLA 859
Query: 120 QF 121
+
Sbjct: 860 HY 861
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L N + L+VL L Y L L +LT L+ LDL C + GLA L +L AL
Sbjct: 355 LKNCKNLKVLCLKIFYTPIDTGLAHL--TSLTALQNLDLSECYLLKDTGLAHLSSLTALQ 412
Query: 60 --DLSSNYYLHGSLEGLANLT---NLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCG 111
DLS L + GLA+LT +LQ LDLS +NLT GLA+L L+ L L DC
Sbjct: 413 YLDLSGCDDLTDA--GLAHLTPLVSLQHLDLSKCENLTGDGLAHLTPLVALRHLGLSDCR 470
Query: 112 ITTIQGIQQFTS 123
T G+ T
Sbjct: 471 NLTDAGLAHLTP 482
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 63/120 (52%), Gaps = 15/120 (12%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L++L L+ LDLS N+T L L +LT LK LDL C T +GLA L L AL
Sbjct: 559 LSSLTALKHLDLSWRENLTDAGLAHL--TSLTALKHLDLSWCENLTDEGLAYLTPLVALQ 616
Query: 61 LSSNYYLHGS------LEGLANLTNLQVLDLSGNQNLTT-LGLANLP---NLKTLDLRDC 110
S L GS LE LA+L+ L+ L L+ + + GLA+L NL+ LDL C
Sbjct: 617 YLS---LKGSDITDEGLEHLAHLSALRHLSLNDCRRIYHGYGLAHLTTLVNLEHLDLSGC 673
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L++L LQ LDLS ++T L L L +L+ LDL C T GLA L L AL
Sbjct: 405 LSSLTALQYLDLSGCDDLTDAGLAHL--TPLVSLQHLDLSKCENLTGDGLAHLTPLVALR 462
Query: 61 ---LSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
LS L L L LT L+ LDLS +NLT GL +L + L+ L L+ C
Sbjct: 463 HLGLSDCRNLTDAGLAHLTPLTALKHLDLSECKNLTDDGLVHLSSLVALQYLSLKLCENL 522
Query: 114 TIQGIQQFTS 123
T G+ TS
Sbjct: 523 TDAGLAHLTS 532
>gi|343033588|gb|AEL79537.1| esag8 [Trypanosoma brucei TREU927]
Length = 630
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 74/131 (56%), Gaps = 14/131 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L NL L+VL +S N + GL L NL+KL+L GC G++++ +A L NL+ L
Sbjct: 320 LKNLINLKVLSVSNCKNFKDLN----GLERLVNLEKLNLSGCHGVSSLAFVANLSNLKEL 375
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-------G 111
++S L +GL +L NL+VL L ++ T +G + NL ++ LDL C G
Sbjct: 376 NISGCESLV-CFDGLQDLNNLEVLYLRDVKSFTNVGAIKNLSKMRELDLSGCERITSLSG 434
Query: 112 ITTIQGIQQFT 122
+ T++G+++ +
Sbjct: 435 LETLKGLEELS 445
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 7/113 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L L L+ L+LS + ++S + +ANL+NLK+L++ GC + GL L NLE L
Sbjct: 343 LERLVNLEKLNLSGCHGVSSLAF----VANLSNLKELNISGCESLVCFDGLQDLNNLEVL 398
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCG 111
L + ++ + NL+ ++ LDLSG + +T+L GL L L+ L L CG
Sbjct: 399 YL-RDVKSFTNVGAIKNLSKMRELDLSGCERITSLSGLETLKGLEELSLEGCG 450
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 23/133 (17%)
Query: 1 LANLRYLQVLDLSANYNITSG--------SLTRLGLA--NLTN-----------LKKLDL 39
L L+ L+ L L NIT G LT L L N+T+ LK LD+
Sbjct: 202 LCRLKTLEALSLDNCINITKGFDKICALPQLTSLSLCQTNVTDKDLRCIHPDGKLKVLDI 261
Query: 40 DGCG-ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL-TTLGLA 97
C IT + +A +++LE L LS + + LE L +NL+ LD+SG L + + L
Sbjct: 262 SSCHEITDLTAIAGVRSLEKLSLSGCWNVTKGLEELCKFSNLRELDISGCLVLGSAVVLK 321
Query: 98 NLPNLKTLDLRDC 110
NL NLK L + +C
Sbjct: 322 NLINLKVLSVSNC 334
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
+ NLR + VL+LS N+ S GL LT L++L L GC ITTI + L+NL+ L
Sbjct: 504 IWNLRNVCVLELSCCENLDDLS----GLQCLTGLEELYLIGCEEITTIGVVGNLRNLKCL 559
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT---LGLANLPNLK 103
L L GL L NL+ LDLSG L++ + L +LP L+
Sbjct: 560 STCWCANLK-ELGGLERLVNLEKLDLSGCCGLSSSVFMELMSLPKLQ 605
>gi|168053070|ref|XP_001778961.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669633|gb|EDQ56216.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 67/117 (57%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCG-ITTIQG-LAKLKNL 56
LANL L LDL+ SLT L L NL++LK+L L GC +T++ LA L +L
Sbjct: 53 LANLSSLTTLDLNG-----CSSLTSLPNDLVNLSSLKRLFLKGCSNLTSLSNELANLSSL 107
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCG 111
E L+L + L LANL++L LDLSG +L +L LANL +LK L LR C
Sbjct: 108 EELNLRNCLSLASLPNELANLSSLITLDLSGCSSLVSLPNELANLSSLKRLSLRGCS 164
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQG-LAKLKNLEA 58
LANL L+ L L ++TS S LANL++L LDL GC +T++ LA L +LE
Sbjct: 149 LANLSSLKRLSLRGCSSLTSSSN---KLANLSSLTTLDLSGCSSLTSLPNVLANLSSLEE 205
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCG 111
L+LS+ L L NL++L VL LSG +LT+L LANL ++ L RDC
Sbjct: 206 LNLSNCSSLARLPNELTNLSSLTVLYLSGCLSLTSLPNELANLSSVNELYFRDCS 260
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 65/115 (56%), Gaps = 7/115 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG--ITTIQGLAKLKNLEA 58
LANL L+ L+L N S + LANL++L LDL GC ++ LA L +L+
Sbjct: 101 LANLSSLEELNL---RNCLSLASLPNELANLSSLITLDLSGCSSLVSLPNELANLSSLKR 157
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCG 111
L L L S LANL++L LDLSG +LT+L LANL +L+ L+L +C
Sbjct: 158 LSLRGCSSLTSSSNKLANLSSLTTLDLSGCSSLTSLPNVLANLSSLEELNLSNCS 212
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Query: 21 GSLTRLG--LANLTNLKKLDLDGCGI--TTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
SLT L LANL++LK+L L C + LA L +L LDL+ L L N
Sbjct: 20 SSLTSLPNELANLSSLKELYLRDCSSLRSLPNELANLSSLTTLDLNGCSSLTSLPNDLVN 79
Query: 77 LTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDC 110
L++L+ L L G NLT+L LANL +L+ L+LR+C
Sbjct: 80 LSSLKRLFLKGCSNLTSLSNELANLSSLEELNLRNC 115
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 28 LANLTNLKKLDLDG-CGITTIQG-LAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
L NL++LK+L L G +T++ LA L +L+ L L L LANL++L LDL
Sbjct: 5 LLNLSSLKRLSLRGYSSLTSLPNELANLSSLKELYLRDCSSLRSLPNELANLSSLTTLDL 64
Query: 86 SGNQNLTTLG--LANLPNLKTLDLRDCG 111
+G +LT+L L NL +LK L L+ C
Sbjct: 65 NGCSSLTSLPNDLVNLSSLKRLFLKGCS 92
>gi|260793005|ref|XP_002591504.1| hypothetical protein BRAFLDRAFT_105270 [Branchiostoma floridae]
gi|229276710|gb|EEN47515.1| hypothetical protein BRAFLDRAFT_105270 [Branchiostoma floridae]
Length = 815
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/111 (41%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNLEA 58
+ + L+VLDLS N +I+ S+ LG L LK LDL I+ +I L L L+
Sbjct: 181 FGDFQQLEVLDLSYN-SISEDSILSLGF--LPRLKVLDLSYNSISEDSILSLGFLPRLKV 237
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGN--QNLTTLGLANLPNLKTLDL 107
LDLS N S+ L L L+VLDLS N + L L LP LK LDL
Sbjct: 238 LDLSYNSISEDSILSLGFLPRLKVLDLSYNSISENSILSLGFLPRLKVLDL 288
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/111 (43%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNLEA 58
L L L+VLDLS N +I+ S+ LG L LK LDL I+ +I L L L+
Sbjct: 205 LGFLPRLKVLDLSYN-SISEDSILSLGF--LPRLKVLDLSYNSISEDSILSLGFLPRLKV 261
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGN--QNLTTLGLANLPNLKTLDL 107
LDLS N S+ L L L+VLDLS N + L L LP LK LDL
Sbjct: 262 LDLSYNSISENSILSLGFLPRLKVLDLSYNSISENSILSLGFLPRLKVLDL 312
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 47/111 (42%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNLEA 58
L L L+VLDLS N +I+ S+ LG L LK LDL I+ +I L L L+
Sbjct: 229 LGFLPRLKVLDLSYN-SISEDSILSLGF--LPRLKVLDLSYNSISENSILSLGFLPRLKV 285
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGN--QNLTTLGLANLPNLKTLDL 107
LDLS N S+ L L L+VLDLS N + L L LP LK L L
Sbjct: 286 LDLSYNSISENSILSLGFLPRLKVLDLSYNSISEDSILSLGFLPRLKVLHL 336
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNLEA 58
L L L+VLDLS N +I+ S+ LG L LK LDL I+ +I L L L+
Sbjct: 253 LGFLPRLKVLDLSYN-SISENSILSLGF--LPRLKVLDLSYNSISENSILSLGFLPRLKV 309
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
LDLS N S+ L L L+VL L+GN
Sbjct: 310 LDLSYNSISEDSILSLGFLPRLKVLHLTGNH 340
>gi|356542868|ref|XP_003539887.1| PREDICTED: uncharacterized protein LOC100790061 [Glycine max]
Length = 689
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/119 (37%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 7 LQVLDLSAN--YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN 64
L+VL+L+ N IT+G+L R L L+L I+TI+GL +L L LDLS N
Sbjct: 424 LKVLNLAGNAIVRITAGALPR-------GLHALNLSRNKISTIEGLRELTRLRVLDLSYN 476
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
L GLA+ ++L+ L L+GN+ GL L L LDLR I+T + + Q +
Sbjct: 477 RILRIG-HGLASCSSLKELYLAGNKISEVEGLHRLLKLSILDLRFNKISTAKCLGQLAA 534
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L L+VLDLS N + G GLA+ ++LK+L L G I+ ++GL +L L LD
Sbjct: 462 LRELTRLRVLDLSYNRILRIGH----GLASCSSLKELYLAGNKISEVEGLHRLLKLSILD 517
Query: 61 LSSNYYLHGSLEG--LANLTNLQVLDLSGNQNLTTLG 95
L N G AN LQ ++L GN +G
Sbjct: 518 LRFNKISTAKCLGQLAANYNTLQAINLDGNPAQKNVG 554
>gi|344267600|ref|XP_003405654.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 1
[Loxodonta africana]
Length = 1638
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA TNL+ L L CG+T++ GL+ KNL+ +D+ N H NL NL +L L+
Sbjct: 792 LAECTNLQFLSLRRCGLTSLHGLSNCKNLKYIDVQEN---HIETINCENLENLCILLLNK 848
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
NQ + GL N++ L+L IT I G++
Sbjct: 849 NQLSSLHGLDGCSNIQNLELSRNKITRIGGLESL 882
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+N + L+ +D+ N+ + + NL NL L L+ ++++ GL N++ L+
Sbjct: 814 LSNCKNLKYIDVQENH------IETINCENLENLCILLLNKNQLSSLHGLDGCSNIQNLE 867
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
LS N + GL +L NLQ L L NQ ++T GL++ P + LD +T +Q I
Sbjct: 868 LSRNKITR--IGGLESLKNLQQLILDHNQLISTKGLSDTPTIIYLDCSHNHLTEVQDI 923
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 15 NYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEG 73
N ++ +TR+G L +L NL++L LD + + +GL+ + LD S N+ ++
Sbjct: 865 NLELSRNKITRIGGLESLKNLQQLILDHNQLISTKGLSDTPTIIYLDCSHNHLTE--VQD 922
Query: 74 LANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
+AN LQVL L GN L N L+ L L D +I + F+SY
Sbjct: 923 IANCGLLQVLKLHGNYLSELPSLKNHVLLRELHLDD---NSISSVAAFSSY 970
>gi|390465017|ref|XP_002750023.2| PREDICTED: uncharacterized protein LOC100391351 [Callithrix
jacchus]
Length = 746
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/122 (37%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL LQ+L+L +N I + + LTNL+ L L IT +Q L L NL L
Sbjct: 568 LSNLHQLQMLELGSN-RIRAIE----NIDTLTNLESLFLGKNKITKLQNLDALTNLTVLS 622
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ SN +EGL NL NL+ L LS N GL N L LD+ I I+ I
Sbjct: 623 MQSNRLT--KIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISH 680
Query: 121 FT 122
T
Sbjct: 681 LT 682
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 48/136 (35%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 1 LANLRYLQVLDLSANY--NITS-GSLTRL--------------GLANLTNLKKLDLDGCG 43
L L L++LD+S N NI LT+L L+NL L+ L+L
Sbjct: 524 LEALTELEILDISFNLLRNIEGVDKLTQLKKLFLVNNKISKIENLSNLHQLQMLELGSNR 583
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
I I+ + L NLE+L L N L+ L LTNL VL + N+ GL NL NL+
Sbjct: 584 IRAIENIDTLTNLESLFLGKNKIT--KLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLR 641
Query: 104 TLDLRDCGITTIQGIQ 119
L L GI I+G++
Sbjct: 642 ELYLSHNGIEVIEGLE 657
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
L +L++LDL I I+ L L LE LD+S N L ++EG+ LT L+ L L N+
Sbjct: 505 LQSLRELDLXDNQIKKIENLEALTELEILDISFN--LLRNIEGVDKLTQLKKLFLVNNKI 562
Query: 91 LTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
L+NL L+ L+L I I+ I T+
Sbjct: 563 SKIENLSNLHQLQMLELGSNRIRAIENIDTLTN 595
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 7 LQVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
LQ LD N + S RL GL NL NL++L L GI I+GL L LD++
Sbjct: 609 LQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIA 668
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGN 88
SN +E +++LT LQ ++ N
Sbjct: 669 SNRI--KKIENISHLTELQEFWMNDN 692
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LT L+ LD+ + I+G+ KL L+ L L +N +E L+NL LQ+L+L
Sbjct: 524 LEALTELEILDISFNLLRNIEGVDKLTQLKKLFLVNNKI--SKIENLSNLHQLQMLELGS 581
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ + L NL++L L IT +Q + T+
Sbjct: 582 NRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTN 617
>gi|46447300|ref|YP_008665.1| hypothetical protein pc1666 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400941|emb|CAF24390.1| hypothetical protein pc1666 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 518
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 76/153 (49%), Gaps = 30/153 (19%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--------------------GLANLTNL---KKL 37
L +L LQ LDLS YN+T LT L GLA+LT+L + L
Sbjct: 255 LTSLVTLQHLDLSKCYNLTDAGLTHLTPLAALQHLNLSYCSKLTDAGLAHLTSLVTLQHL 314
Query: 38 DLDGCGITTIQGLAKLKNLEAL-DLSSNYYLHGSLEGLANLTNL---QVLDLSGNQNLTT 93
DL C T GLA L L AL L+ +Y + + GLA+LT+L Q LDL+ NLT
Sbjct: 315 DLTWCVNLTDVGLAHLTPLAALQHLNLSYCIKLTDVGLAHLTSLVALQHLDLTWCVNLTE 374
Query: 94 LGLANLPNLKT---LDLRDCGITTIQGIQQFTS 123
+GLA+L L T L+L C T G+ TS
Sbjct: 375 VGLAHLTPLVTLQHLELSKCHNLTDAGLAHLTS 407
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 66/125 (52%), Gaps = 25/125 (20%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLT---NLKKLDLDGCGITTIQGLAKLKNLE 57
L +L LQ LDL+ N LT +GLA+LT L+ L+L C T GLA L +L
Sbjct: 355 LTSLVALQHLDLTWCVN-----LTEVGLAHLTPLVTLQHLELSKCHNLTDAGLAHLTSLV 409
Query: 58 ALDLSSNYYLHGSL------EGLANLTNL---QVLDLSGNQNLTTLGLANLPN---LKTL 105
AL +L+ S+ GLA+LT L Q LDLSG LT +GLA+L L+ L
Sbjct: 410 ALQ-----HLNLSICKKITDVGLAHLTPLVALQHLDLSGCDKLTDVGLAHLTTLVALQHL 464
Query: 106 DLRDC 110
DL C
Sbjct: 465 DLTCC 469
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNL---KKLDLDGCGITTIQGLAKLKNLE 57
L +L LQ L+LS IT +GLA+LT L + LDL GC T GLA L L
Sbjct: 405 LTSLVALQHLNLSICKKITD-----VGLAHLTPLVALQHLDLSGCDKLTDVGLAHLTTLV 459
Query: 58 AL---DLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKT 104
AL DL+ L L L L LQ L+LS NLT GLA+ NL T
Sbjct: 460 ALQHLDLTCCVNLTDAGLVHLKPLMALQHLNLSYCTNLTDAGLAHFKNLTT 510
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 63/130 (48%), Gaps = 13/130 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L L LQ L+LS +N+T L L +L L+ L+L C T GLA L L AL
Sbjct: 380 LTPLVTLQHLELSKCHNLTDAGLAHL--TSLVALQHLNLSICKKITDVGLAHLTPLVALQ 437
Query: 60 --DLSSNYYLHGSLEGLANLTNL---QVLDLSGNQNLTTLGLANLPN---LKTLDLRDCG 111
DLS L GLA+LT L Q LDL+ NLT GL +L L+ L+L C
Sbjct: 438 HLDLSGCDKLTDV--GLAHLTTLVALQHLDLTCCVNLTDAGLVHLKPLMALQHLNLSYCT 495
Query: 112 ITTIQGIQQF 121
T G+ F
Sbjct: 496 NLTDAGLAHF 505
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 54/126 (42%), Gaps = 26/126 (20%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L N + L+VL L +N+T L+ L A L L+ L+L C T GLA L
Sbjct: 205 LKNCKNLKVLYLQECHNLTDAGLSHL--APLVTLQHLNLSYCSKLTDAGLAHL------- 255
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLAN---LPNLKTLDLRDCGITTIQG 117
+L LQ LDLS NLT GL + L L+ L+L C T G
Sbjct: 256 --------------TSLVTLQHLDLSKCYNLTDAGLTHLTPLAALQHLNLSYCSKLTDAG 301
Query: 118 IQQFTS 123
+ TS
Sbjct: 302 LAHLTS 307
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 55 NLEALDLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKT---LDLRDC 110
+EAL+ S N YL L L N NL+VL L NLT GL++L L T L+L C
Sbjct: 185 EIEALNFSENTYLIDAHLLTLKNCKNLKVLYLQECHNLTDAGLSHLAPLVTLQHLNLSYC 244
Query: 111 GITTIQGIQQFTS 123
T G+ TS
Sbjct: 245 SKLTDAGLAHLTS 257
>gi|121699760|ref|XP_001268145.1| conserved leucine-rich repeat protein [Aspergillus clavatus NRRL 1]
gi|119396287|gb|EAW06719.1| conserved leucine-rich repeat protein [Aspergillus clavatus NRRL 1]
Length = 1856
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/104 (41%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 7 LQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY 65
LQ LD+S N L L G +L +L++L DG I + G+ L L +L LS N
Sbjct: 1406 LQYLDVSNN------ELESLDGFGSLIHLRELKADGNHIRNLDGVLDLNGLLSLKLSHNS 1459
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRD 109
L G A LT LQ LDLS NQ ++ L LP+L LDL D
Sbjct: 1460 -LTAVDFGAAELTRLQELDLSHNQLVSVRHLDLLPSLSKLDLSD 1502
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 7/116 (6%)
Query: 9 VLDLSA--NYNITSGSLTRL--GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN 64
VLDL+ + ++ SLT + G A LT L++LDL + +++ L L +L LDLS N
Sbjct: 1444 VLDLNGLLSLKLSHNSLTAVDFGAAELTRLQELDLSHNQLVSVRHLDLLPSLSKLDLSDN 1503
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
Y +L A L +L+ L L+ NQ L L ++ L +L L L ++TI G+++
Sbjct: 1504 YVKKINLS--APLPSLESLKLANNQ-LQNLDVSMLQSLVLLYLDQNYLSTISGLER 1556
>gi|334117577|ref|ZP_08491668.1| leucine-rich repeat-containing protein [Microcoleus vaginatus
FGP-2]
gi|333460686|gb|EGK89294.1| leucine-rich repeat-containing protein [Microcoleus vaginatus
FGP-2]
Length = 348
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA+LTNL +L+LDG I I+ LA L NL +LDLS N G ++ LA+LT L VL LSG
Sbjct: 271 LASLTNLTRLNLDGNVIGDIKPLASLTNLRSLDLSRNVI--GDIKPLASLTKLTVLHLSG 328
Query: 88 NQ 89
N+
Sbjct: 329 NE 330
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 64/118 (54%), Gaps = 7/118 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LA+L L LDLS N G + LA+LTNL L L I I+ LA L NL L
Sbjct: 139 LASLTNLTFLDLSDNQ---IGDIK--PLASLTNLTILFLSDNQIGDIKPLASLTNLTFLF 193
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
LS N G ++ LA+LTNL LDLS NQ LA+L NL +LDL D I I+ +
Sbjct: 194 LSDNKI--GDIKPLASLTNLTFLDLSDNQIGDIKPLASLTNLSSLDLSDNRIGDIKPL 249
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA+LTNL L L I I+ LA L NL L LS N G ++ LA+LTNL LDLS
Sbjct: 95 LASLTNLTWLFLGSNQIGDIKPLASLTNLTRLSLSENPI--GDIKPLASLTNLTFLDLSD 152
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LA+L NL L L D I I+ + T
Sbjct: 153 NQIGDIKPLASLTNLTILFLSDNQIGDIKPLASLT 187
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 55/115 (47%), Gaps = 20/115 (17%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH------------------- 68
LA+LTNL LDL I I+ LA L NL +LDLS N
Sbjct: 205 LASLTNLTFLDLSDNQIGDIKPLASLTNLSSLDLSDNRIGDIKPLASLTNLTRLNLLDNQ 264
Query: 69 -GSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
G ++ LA+LTNL L+L GN LA+L NL++LDL I I+ + T
Sbjct: 265 IGDIKPLASLTNLTRLNLDGNVIGDIKPLASLTNLRSLDLSRNVIGDIKPLASLT 319
>gi|327272824|ref|XP_003221184.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein
1-like [Anolis carolinensis]
Length = 1492
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 67/115 (58%), Gaps = 9/115 (7%)
Query: 9 VLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYL 67
+L+L +YN +TR+G L +L NL++L ++ + + +GL++ L +D S N+
Sbjct: 721 LLNLELSYN----KITRIGGLESLKNLQRLVVNHNQLISTKGLSETPTLVYIDCSFNHLT 776
Query: 68 HGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQQF 121
H +EG+ N LQ+L L GN NL+ L L N L+ LDL D I++++ I +
Sbjct: 777 H--VEGIENCGVLQILKLQGN-NLSELPSLENHVLLRELDLEDNSISSLEKISLY 828
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L N + L+ +D+ N ++ + NL NL L L+ I+++ GL NL L+
Sbjct: 672 LGNCKDLKYIDVEEN------NIQVINCENLENLCILILNKNNISSLHGLHGCSNLLNLE 725
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
LS N + GL +L NLQ L ++ NQ ++T GL+ P L +D +T ++GI+
Sbjct: 726 LSYNKITR--IGGLESLKNLQRLVVNHNQLISTKGLSETPTLVYIDCSFNHLTHVEGIE 782
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L+ L+ L L CG+ ++GL K+L+ +D+ N + E NL NL +L L+
Sbjct: 650 LSQCLKLQFLSLRRCGLLALEGLGNCKDLKYIDVEENNIQVINCE---NLENLCILILNK 706
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
N + GL NL L+L IT I G++
Sbjct: 707 NNISSLHGLHGCSNLLNLELSYNKITRIGGLESL 740
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 21 GSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNL 80
G L GL N +LK +D++ I I L+NL L L+ N SL GL +NL
Sbjct: 665 GLLALEGLGNCKDLKYIDVEENNIQVIN-CENLENLCILILNKNNI--SSLHGLHGCSNL 721
Query: 81 QVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
L+LS N+ GL +L NL+ L + + + +G+ +
Sbjct: 722 LNLELSYNKITRIGGLESLKNLQRLVVNHNQLISTKGLSE 761
>gi|339249139|ref|XP_003373557.1| acidic leucine-rich nuclear phosphoprotein 32 family member A
[Trichinella spiralis]
gi|316970296|gb|EFV54269.1| acidic leucine-rich nuclear phosphoprotein 32 family member A
[Trichinella spiralis]
Length = 303
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ- 89
NL++L L G+ +++ KL++L+ LDLS N+ +G LE L N NL+ + L+GN+
Sbjct: 42 FVNLEELSLVNVGLQSLKKFPKLESLKKLDLSDNFIANG-LENLLNCPNLKHIQLNGNKI 100
Query: 90 -NLTTLG-LANLPNLKTLDLRDCGITTIQGIQQ 120
+ L L L NL LDL +CG+T +G +Q
Sbjct: 101 NDFQQLECLKELKNLTHLDLFNCGVTDEEGYRQ 133
>gi|443704419|gb|ELU01481.1| hypothetical protein CAPTEDRAFT_222855 [Capitella teleta]
Length = 1133
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/107 (39%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L NL L LDLS N LT + GL +NL L+LD IT + GLA LK+L L
Sbjct: 392 LINLSSLTFLDLSHNM------LTSIHGLDGCSNLLHLNLDYNKITRLGGLATLKHLHTL 445
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLD 106
LS N + S +G+ + ++Q LD+S N + + L L+TLD
Sbjct: 446 RLSHNQLI--STKGVGDAASIQCLDISHNHLSSVTDIDRLGILQTLD 490
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 26 LGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
+ L NL++L LDL +T+I GL NL L+L N L GLA L +L L L
Sbjct: 390 INLINLSSLTFLDLSHNMLTSIHGLDGCSNLLHLNLDYNKITR--LGGLATLKHLHTLRL 447
Query: 86 SGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
S NQ ++T G+ + +++ LD+ ++++ I +
Sbjct: 448 SHNQLISTKGVGDAASIQCLDISHNHLSSVTDIDRL 483
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LA L++L L LS N I++ G+ + +++ LD+ ++++ + +L L+ LD
Sbjct: 436 LATLKHLHTLRLSHNQLISTK-----GVGDAASIQCLDISHNHLSSVTDIDRLGILQTLD 490
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGN--QNLTTLGLANLPNLKTLDL 107
S+N + L N L LDLS N ++ L + LP L++L+L
Sbjct: 491 ASNNNLMQAPL--FTNQVLLSSLDLSDNSISSVAQLSHSWLPLLRSLNL 537
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 32 TNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEG--LANLTNLQVLDLSGNQ 89
++L L L CG+ ++ L KNL N +E L NL++L LDLS N
Sbjct: 353 SSLCYLYLHKCGVVSVDSLQSCKNLLYASFKKN-----QIEAINLINLSSLTFLDLSHNM 407
Query: 90 NLTTLGLANLPNLKTLDLRDCGITTIQGI 118
+ GL NL L+L IT + G+
Sbjct: 408 LTSIHGLDGCSNLLHLNLDYNKITRLGGL 436
>gi|422418246|ref|ZP_16495201.1| internalin A, partial [Listeria seeligeri FSL N1-067]
gi|313634311|gb|EFS00922.1| internalin A [Listeria seeligeri FSL N1-067]
Length = 587
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 69/132 (52%), Gaps = 20/132 (15%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEA 58
++ L Y++ L + T S+T L L NLT L +D DG G I ++ LA L NLE
Sbjct: 90 ISGLEYMENL---TGIDFTYCSVTDLTPLTNLTKLTYVDFDGNGNIVNLEPLAGLTNLET 146
Query: 59 LDLSSNYYLHGSLEG--------LANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDC 110
L+L G+ +G LANLTNL+ LDL GN + L+ L NL++LD+ +
Sbjct: 147 LNL-------GAFDGNSVVDISPLANLTNLKALDLEGNNIVDVSPLSGLTNLESLDIYNN 199
Query: 111 GITTIQGIQQFT 122
I+ I + T
Sbjct: 200 EISDISALSSLT 211
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 56/110 (50%), Gaps = 26/110 (23%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNLK LDL+G I + L+ L NLE+LD+ +N + L++LT L L +
Sbjct: 163 LANLTNLKALDLEGNNIVDVSPLSGLTNLESLDIYNNEI--SDISALSSLTKLNSLFIGA 220
Query: 88 N-----------QNLTTL-----GLAN--------LPNLKTLDLRDCGIT 113
N QNLT L GL N L +LKTL ++D IT
Sbjct: 221 NTISDLTPLTSMQNLTILESRGNGLVNKDLEIINSLSSLKTLRMQDNDIT 270
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 30 NLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
+L ++ +L+ GI++I GL ++NL +D + Y L L NLT L +D GN
Sbjct: 73 DLDSITELECTSAGISSISGLEYMENLTGIDFT--YCSVTDLTPLTNLTKLTYVDFDGNG 130
Query: 90 NLTTL-GLANLPNLKTLDL 107
N+ L LA L NL+TL+L
Sbjct: 131 NIVNLEPLAGLTNLETLNL 149
>gi|46447554|ref|YP_008919.1| hypothetical protein pc1920 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401195|emb|CAF24644.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 517
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 62/126 (49%), Gaps = 9/126 (7%)
Query: 5 RYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL---DL 61
+ ++ L+ S N +T L L L NLK L L+ C T GLA L L AL DL
Sbjct: 225 KKIEALNFSENAYLTDAHL--LALKVCKNLKVLHLEACQAITDDGLAHLTPLTALQHLDL 282
Query: 62 SSNYYLHG-SLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQG 117
S L G L L LT LQ LDLSG NLT GLA+L L+ L+L DC T G
Sbjct: 283 SQCRKLTGIGLAHLTPLTALQHLDLSGCDNLTDAGLAHLAPLTALQHLNLSDCENLTDAG 342
Query: 118 IQQFTS 123
+ +
Sbjct: 343 LVHLSP 348
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L L LQ LDLS N+T L L A LT L+ L+L C T GL L L AL
Sbjct: 296 LTPLTALQHLDLSGCDNLTDAGLAHL--APLTALQHLNLSDCENLTDAGLVHLSPLIALQ 353
Query: 60 --DLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLP---NLKTLDLRDCGIT 113
DLS + L + L L LT LQ LDLS NLT GLA+L L+ L+LR C
Sbjct: 354 HLDLSYCWRLNYAGLAHLKPLTALQYLDLSHCINLTDAGLAHLKPLMRLQYLNLRYCENL 413
Query: 114 TIQGIQQFTS 123
T G+ T
Sbjct: 414 TDAGLAHLTP 423
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L L LQ LDLS N+T L L L L+ L+L C T GLA L L AL
Sbjct: 371 LKPLTALQYLDLSHCINLTDAGLAHLK--PLMRLQYLNLRYCENLTDAGLAHLTPLMALQ 428
Query: 60 --DLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
+LS Y+L L L LT LQ LDLS ++LT GLA+L + L+ LDL C
Sbjct: 429 HLNLSECYHLTDAGLTHLTPLTALQHLDLSHCRSLTDAGLAHLTSLTVLQYLDLSYCKNL 488
Query: 114 TIQGIQQFTS 123
T G+ + T
Sbjct: 489 TDAGLARLTP 498
>gi|28210240|ref|NP_781184.1| internalin A-like protein/ S-layer protein [Clostridium tetani E88]
gi|28202676|gb|AAO35121.1| internalin A-like protein/putative S-layer protein [Clostridium
tetani E88]
Length = 706
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 12/117 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L NL+ LQ IT+ +L+ L L NLTNL++L+L I ++ L L LE L
Sbjct: 412 LENLKKLQ---------ITATNLSELHPLKNLTNLERLELGENKIFEVEDLQGLIKLEVL 462
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQ 116
DLS NY + L NLT+++ L L+ N+ +AN+ NL+ L + D ITT++
Sbjct: 463 DLSDNYI--KDISSLKNLTDIKELKLNKNKVSDISIVANMKNLQRLYINDNNITTLK 517
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 19/130 (14%)
Query: 7 LQVLDLSANYNITSGSLTRLG-----------------LANLTNLKKLDLDGCGITTIQG 49
L+VLDLS NY SL L +AN+ NL++L ++ ITT++
Sbjct: 459 LEVLDLSDNYIKDISSLKNLTDIKELKLNKNKVSDISIVANMKNLQRLYINDNNITTLKY 518
Query: 50 LAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRD 109
L K+L L ++N S EGL NL +++ + + N+ L NL L+TL R
Sbjct: 519 LKDAKDLVWLTANNNKI--TSFEGLENLLDIKEIHVDNNKISKLDPLKNLKELETLSART 576
Query: 110 CGITTIQGIQ 119
I+ ++ I+
Sbjct: 577 NVISDLKPIE 586
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 65/144 (45%), Gaps = 29/144 (20%)
Query: 1 LANLRYLQVLDLSA-NYNITSG-------SLTRLGLANLTNLKKL----DLDG------- 41
LA++ Y++ L+L A N SG LG N+ ++ L DL+G
Sbjct: 343 LADVEYIKELNLFAKNIKDISGMEYLRGLRWVNLGKNNIRDISPLKDLEDLEGLYLYKTK 402
Query: 42 -CGITTIQGLAKLKNLE--ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLAN 98
IT +QGL LK L+ A +LS L L NLTNL+ L+L N+ L
Sbjct: 403 VSDITPLQGLENLKKLQITATNLSE-------LHPLKNLTNLERLELGENKIFEVEDLQG 455
Query: 99 LPNLKTLDLRDCGITTIQGIQQFT 122
L L+ LDL D I I ++ T
Sbjct: 456 LIKLEVLDLSDNYIKDISSLKNLT 479
>gi|46447589|ref|YP_008954.1| hypothetical protein pc1955 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401230|emb|CAF24679.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 454
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 70/130 (53%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG---LAKLKNLE 57
L L L L+LS Y++T+ L L A LT L+ L+L C T G LA L L+
Sbjct: 316 LTPLTALLYLNLSKCYHLTNVGLAHL--APLTGLQYLNLKWCWNLTDAGFSHLASLTALQ 373
Query: 58 ALDLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
LDLS L L LA+LT LQ L LS +NLT +GLA+L L+ LDLR+C
Sbjct: 374 HLDLSDCENLTDAGLAYLASLTALQYLGLSQCRNLTDVGLAHLTPLTALQHLDLRECDKV 433
Query: 114 TIQGIQQFTS 123
T G+ +F +
Sbjct: 434 TDAGLARFKT 443
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 66/130 (50%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L L LQ L+LS + IT L L LT+L+ L+L C T GLA L L AL
Sbjct: 266 LTPLTALQHLNLSYCWKITDAGLAHL--TPLTDLQHLNLSDCENLTDAGLAHLTPLTALL 323
Query: 60 --DLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLG---LANLPNLKTLDLRDCGIT 113
+LS Y+L + L LA LT LQ L+L NLT G LA+L L+ LDL DC
Sbjct: 324 YLNLSKCYHLTNVGLAHLAPLTGLQYLNLKWCWNLTDAGFSHLASLTALQHLDLSDCENL 383
Query: 114 TIQGIQQFTS 123
T G+ S
Sbjct: 384 TDAGLAYLAS 393
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSS 63
L ++ L+ S N ++ L L L N NLK L L+ C T GLA L L +L +
Sbjct: 194 LDEIEALNFSGNAHLADAHL--LALKNCENLKLLHLEACQAITDDGLAHLALLTSLQHLN 251
Query: 64 NYYL----HGSLEGLANLTNLQVLDLSGNQNLTTLGLANL-P--NLKTLDLRDCGITTIQ 116
Y+ L L LT LQ L+LS +T GLA+L P +L+ L+L DC T
Sbjct: 252 LYFCVNLTDAGLAHLTPLTALQHLNLSYCWKITDAGLAHLTPLTDLQHLNLSDCENLTDA 311
Query: 117 GIQQFTS 123
G+ T
Sbjct: 312 GLAHLTP 318
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L N L++L L A IT L L L LT+L+ L+L C T GLA L L AL
Sbjct: 216 LKNCENLKLLHLEACQAITDDGLAHLAL--LTSLQHLNLYFCVNLTDAGLAHLTPLTALQ 273
Query: 61 -LSSNYYLHGSLEGLANLT---NLQVLDLSGNQNLTTLGLANLPNLKTL 105
L+ +Y + GLA+LT +LQ L+LS +NLT GLA+L L L
Sbjct: 274 HLNLSYCWKITDAGLAHLTPLTDLQHLNLSDCENLTDAGLAHLTPLTAL 322
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LA L LQ L+L +N+T + L A+LT L+ LDL C T GLA L +L AL
Sbjct: 341 LAPLTGLQYLNLKWCWNLTDAGFSHL--ASLTALQHLDLSDCENLTDAGLAYLASLTALQ 398
Query: 61 ---LSSNYYLHG-SLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKT 104
LS L L L LT LQ LDL +T GLA L T
Sbjct: 399 YLGLSQCRNLTDVGLAHLTPLTALQHLDLRECDKVTDAGLARFKTLAT 446
>gi|46446626|ref|YP_007991.1| hypothetical protein pc0992 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400267|emb|CAF23716.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 583
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L N L+VL L A IT L L A L L+ LDL C T GLA L L AL
Sbjct: 247 LKNCENLKVLHLEACLAITDDGLAHL--APLVALQHLDLSDCENLTDVGLAHLTPLTALQ 304
Query: 60 --DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
DL Y+ L L LT LQ L+LS N T GLA+L L+ LDLR C +T
Sbjct: 305 HLDLRGCYFTDAGLAHLTPLTALQHLNLSFCSNATDAGLAHLTPLTALQHLDLRGCYLT 363
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 51/110 (46%), Gaps = 26/110 (23%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY 66
++ LD S N ++T L L L N NLK L L+ C T GLA
Sbjct: 228 IEALDFSNNAHLTDAHL--LALKNCENLKVLHLEACLAITDDGLAH-------------- 271
Query: 67 LHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
LA L LQ LDLS +NLT +GLA+L L+ LDLR C T
Sbjct: 272 -------LAPLVALQHLDLSDCENLTDVGLAHLTPLTALQHLDLRGCYFT 314
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 61/132 (46%), Gaps = 15/132 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNL---KKLDLDGCGITTIQGLAKLKNLE 57
L L LQ LDL Y T GLA+LT L + L+L C T GLA L L
Sbjct: 297 LTPLTALQHLDLRGCY------FTDAGLAHLTPLTALQHLNLSFCSNATDAGLAHLTPLT 350
Query: 58 AL---DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCG 111
AL DL Y L L LT LQ LDL G ++LT GLA+L L+ L+L C
Sbjct: 351 ALQHLDLRGCYLTDAGLAHLTPLTGLQHLDLIGCKDLTDAGLAHLRPLTALQHLNLNWCR 410
Query: 112 ITTIQGIQQFTS 123
T G+ T
Sbjct: 411 NLTDAGLAHLTP 422
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 13/102 (12%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNL---KKLDLDGCGITTIQGLAKLKNLE 57
L L LQ LDL Y LT GLA+LT L + LDL GC T GLA L+ L
Sbjct: 346 LTPLTALQHLDLRGCY------LTDAGLAHLTPLTGLQHLDLIGCKDLTDAGLAHLRPLT 399
Query: 58 AL-DLSSNYYLHGSLEGLANLTNL---QVLDLSGNQNLTTLG 95
AL L+ N+ + + GLA+LT L Q LDLS N+T G
Sbjct: 400 ALQHLNLNWCRNLTDAGLAHLTPLTALQHLDLSFCSNITDDG 441
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL---DLSS 63
LQ L+L+ N+T L L L L+ L L C T GLA L L AL +LS
Sbjct: 476 LQHLNLNWYKNLTDAGLAHL--TPLAGLQYLALTDCKNLTDAGLAHLTPLTALQHLNLSG 533
Query: 64 NYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKT 104
Y L L L +LT LQ LDLS NLT GL L T
Sbjct: 534 CYKLTDAGLAHLTSLTALQYLDLSYCMNLTDDGLDRFKTLAT 575
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 55 NLEALDLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNL---KTLDLRDC 110
+EALD S+N +L L L N NL+VL L +T GLA+L L + LDL DC
Sbjct: 227 EIEALDFSNNAHLTDAHLLALKNCENLKVLHLEACLAITDDGLAHLAPLVALQHLDLSDC 286
Query: 111 GITTIQGIQQFTS 123
T G+ T
Sbjct: 287 ENLTDVGLAHLTP 299
>gi|325186913|emb|CCA21457.1| protein phosphatase 1 regulatory subunit putative [Albugo laibachii
Nc14]
Length = 310
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 19/130 (14%)
Query: 7 LQVLDLSAN-----------------YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG 49
LQVLDLS N + ++ +T G++ L+ LKKLDL I I+G
Sbjct: 94 LQVLDLSFNEIRVLPDMSHLPQLRELFVASNKLVTITGISKLSGLKKLDLGANRIRLIEG 153
Query: 50 LAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRD 109
L L+NLE L L N +EGL +L +L++L + N+ + G+ L NLK L L
Sbjct: 154 LDHLENLEQLWLGKNKI--EKMEGLEHLNSLRILSIQSNRLVEMEGMDQLTNLKELYLSH 211
Query: 110 CGITTIQGIQ 119
I T++ ++
Sbjct: 212 NAIETLKNME 221
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 19 TSG-SLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
TSG +TR GL N+ LK L + +T++ + L++L L+L N + L
Sbjct: 33 TSGQKVTRFNGLENMRKLKILQVRSNLLTSMDEVESLRSLVHLELYDNRI--KVIPCLDE 90
Query: 77 LTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
L NLQVLDLS N+ +++LP L+ L + + TI GI + +
Sbjct: 91 LVNLQVLDLSFNEIRVLPDMSHLPQLRELFVASNKLVTITGISKLS 136
>gi|406604865|emb|CCH43740.1| hypothetical protein BN7_3294 [Wickerhamomyces ciferrii]
Length = 350
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 26 LGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
+ L N T LK L+L G I+ I+ L KL+NLE L L N E L L NL++L +
Sbjct: 168 VNLDNFTKLKNLELGGNRISKIENLDKLENLEELWLGKNKI--PRFENLNPLRNLKILSI 225
Query: 86 SGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
N+ GL NL NL+ L + GI I+G++
Sbjct: 226 QSNRITKLEGLENLVNLEELYVSHNGIEKIEGLE 259
>gi|350637996|gb|EHA26352.1| hypothetical protein ASPNIDRAFT_170726 [Aspergillus niger ATCC
1015]
Length = 946
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G+ T+L+ L+L I I+ L LK LE L L N L+ L L+NL++L +
Sbjct: 743 GVETFTSLRNLELGANRIREIENLDNLKALEELWLGKNKITE--LKNLDGLSNLRILSIQ 800
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ GLANL NL+ L + IT + G+++ TS
Sbjct: 801 SNRLTKISGLANLKNLEELYVSHNAITDLSGLEENTS 837
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 43/106 (40%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L NL+ L+ L L N +T L L L+NL+ L + +T I GLA LKNLE L
Sbjct: 766 LDNLKALEELWLGKN------KITELKNLDGLSNLRILSIQSNRLTKISGLANLKNLEEL 819
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
+S N L GL T+L+VLD S NQ L++L NL+ L
Sbjct: 820 YVSHNAIT--DLSGLEENTSLRVLDFSNNQVSKLEHLSHLKNLEEL 863
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 12/90 (13%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L+NLR L +I S LT++ GLANL NL++L + IT + GL + +L L
Sbjct: 791 LSNLRIL---------SIQSNRLTKISGLANLKNLEELYVSHNAITDLSGLEENTSLRVL 841
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
D S+N LE L++L NL+ L S NQ
Sbjct: 842 DFSNNQV--SKLEHLSHLKNLEELWASNNQ 869
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 28 LANLTNLKKLD---LDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLD 84
+ NL NLK L+ L IT ++ L L NL L + SN + GLANL NL+ L
Sbjct: 763 IENLDNLKALEELWLGKNKITELKNLDGLSNLRILSIQSNRLT--KISGLANLKNLEELY 820
Query: 85 LSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
+S N GL +L+ LD + ++ ++ +
Sbjct: 821 VSHNAITDLSGLEENTSLRVLDFSNNQVSKLEHLSHL 857
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 54 KNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
K+L LDL N H ++GL NL LDLS N+ +++L L L I+
Sbjct: 682 KSLTELDLYDNLISH--VKGLDEFENLTSLDLSFNKIKHVKNISHLVKLTDLYFVQNKIS 739
Query: 114 TIQGIQQFTS 123
I+G++ FTS
Sbjct: 740 KIEGVETFTS 749
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 20/111 (18%)
Query: 33 NLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH--------------------GSLE 72
+L +LDL I+ ++GL + +NL +LDLS N H +E
Sbjct: 683 SLTELDLYDNLISHVKGLDEFENLTSLDLSFNKIKHVKNISHLVKLTDLYFVQNKISKIE 742
Query: 73 GLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
G+ T+L+ L+L N+ L NL L+ L L IT ++ + ++
Sbjct: 743 GVETFTSLRNLELGANRIREIENLDNLKALEELWLGKNKITELKNLDGLSN 793
>gi|428313362|ref|YP_007124339.1| Leucine Rich Repeat (LRR)-containing protein [Microcoleus sp. PCC
7113]
gi|428254974|gb|AFZ20933.1| Leucine Rich Repeat (LRR)-containing protein [Microcoleus sp. PCC
7113]
Length = 240
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
LA LTNLK+L L IT + LA+L NLE L LS N + LA LTNL LDL
Sbjct: 90 PLAGLTNLKELFLTLNEITDVSPLARLTNLEKLFLSQNPI--ADVTPLAGLTNLTELDLH 147
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
GN+ LA L NLK L L + IT + + + T
Sbjct: 148 GNKITDVSPLARLINLKDLRLNNNQITDVSPLARLT 183
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
LA LTNL +LDL G IT + LA+L NL+ L L++N S LA LTNL VL LS
Sbjct: 134 PLAGLTNLTELDLHGNKITDVSPLARLINLKDLRLNNNQITDVS--PLARLTNLWVLYLS 191
Query: 87 GNQ 89
NQ
Sbjct: 192 YNQ 194
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
LA LTNL+KL L I + LA L NL LDL N S LA L NL+ L L+
Sbjct: 112 PLARLTNLEKLFLSQNPIADVTPLAGLTNLTELDLHGNKITDVS--PLARLINLKDLRLN 169
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
NQ LA L NL L L IT I + +
Sbjct: 170 NNQITDVSPLARLTNLWVLYLSYNQITDISPLAE 203
>gi|170758424|ref|YP_001787104.1| hypothetical protein CLK_1164 [Clostridium botulinum A3 str. Loch
Maree]
gi|169405413|gb|ACA53824.1| leucine rich repeat protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 1359
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 6/97 (6%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLT+L+ LDL GI+ I L+KL+NL L L N L L NLTNL LDL G
Sbjct: 898 LENLTDLRVLDLSRTGISNISILSKLRNLNELYLGGNKI--TDLSYLENLTNLIKLDLVG 955
Query: 88 NQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N ++T++ L NL NL+ L L IT + IQ +++
Sbjct: 956 NNDITSIYALRNLINLRYLTL---PITNPKKIQDYSA 989
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 20/108 (18%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY----------------YLH----GS 70
L ++ KL+L G GI +QGL ++NL LDLS+N LH GS
Sbjct: 593 LLSITKLELSGRGIVDLQGLESMENLIYLDLSNNEISNIDSIKKLINLKKLVLHKNKIGS 652
Query: 71 LEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
++ + +LT L+ LDLS N L L L LDL GI +I +
Sbjct: 653 IKVIESLTKLEELDLSNNLIGDITALGGLSQLTRLDLSRNGIVSINSL 700
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L ++ L LDLS N NI S + L NLKKL L I +I+ + L LE
Sbjct: 612 LESMENLIYLDLSNNEISNIDS-------IKKLINLKKLVLHKNKIGSIKVIESLTKLEE 664
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
LDLS+N L G + L L+ L LDLS N ++ L L NL+ L L + I+
Sbjct: 665 LDLSNN--LIGDITALGGLSQLTRLDLSRNGIVSINSLGGLINLQYLSLYENKIS 717
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
++L N+K+LD I + G+ + LE L+LS SL L LTNL+ +++S
Sbjct: 352 SDLENIKELDFHNAHIEKLNGIENMTALEKLNLSGTDIKDISL--LKYLTNLREVNISNT 409
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
L + ++ L+L ITT++ I++F
Sbjct: 410 SISDITALESSIYIRYLNLNKTEITTLEVIKKF 442
>gi|170757260|ref|YP_001781332.1| hypothetical protein CLD_2856 [Clostridium botulinum B1 str. Okra]
gi|169122472|gb|ACA46308.1| leucine rich repeat protein [Clostridium botulinum B1 str. Okra]
Length = 1359
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 6/97 (6%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLT+L+ LDL GI+ I L+KL+NL L L N L L NLTNL LDL G
Sbjct: 898 LENLTDLRVLDLSRTGISNISILSKLRNLNELYLGGNKI--TDLSYLENLTNLIKLDLVG 955
Query: 88 NQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N ++T++ L NL NL+ L L IT + IQ +++
Sbjct: 956 NNDITSIYALRNLINLRYLTL---PITNPKKIQDYSA 989
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 20/108 (18%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY----------------YLH----GS 70
L ++ KL+L G GI +QGL ++NL LDLS+N LH GS
Sbjct: 593 LLSITKLELSGRGIVDLQGLESMENLIYLDLSNNEISNIDSIKKLINLKKLVLHKNKIGS 652
Query: 71 LEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
++ + +LT L+ LDLS N L L L LDL GI +I +
Sbjct: 653 IKVIESLTKLEELDLSNNLIGDITALGGLSQLTRLDLSRNGIVSINSL 700
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L ++ L LDLS N NI S + L NLKKL L I +I+ + L LE
Sbjct: 612 LESMENLIYLDLSNNEISNIDS-------IKKLINLKKLVLHKNKIGSIKVIESLTKLEE 664
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
LDLS+N L G + L L+ L LDLS N ++ L L NL+ L L + I+
Sbjct: 665 LDLSNN--LIGDITALGGLSQLTRLDLSRNGIVSINSLGGLINLQYLSLYENKIS 717
Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
++L N+K+LD I + G+ + LE L+LS SL L LTNL+ +++S
Sbjct: 352 SDLENIKELDFHNTHIEKLNGIENMTALEKLNLSGTDIKDISL--LKYLTNLREVNISNT 409
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
L + ++ L+L ITT++ I++F
Sbjct: 410 SISDITALESSIYIRYLNLNKTEITTLEVIKKF 442
>gi|153940509|ref|YP_001391037.1| hypothetical protein CLI_1777 [Clostridium botulinum F str.
Langeland]
gi|384462076|ref|YP_005674671.1| leucine rich repeat protein [Clostridium botulinum F str. 230613]
gi|152936405|gb|ABS41903.1| leucine rich repeat protein [Clostridium botulinum F str.
Langeland]
gi|295319093|gb|ADF99470.1| leucine rich repeat protein [Clostridium botulinum F str. 230613]
Length = 1359
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 6/97 (6%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLT+L+ LDL GI+ I L+KL+NL L L N L L NLTNL LDL G
Sbjct: 898 LENLTDLRVLDLSRTGISNISILSKLRNLNELYLGGNKI--TDLSYLENLTNLIKLDLVG 955
Query: 88 NQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N ++T++ L NL NL+ L L IT + IQ +++
Sbjct: 956 NNDITSIYALRNLINLRYLTL---PITNPKKIQDYSA 989
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 20/108 (18%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY----------------YLH----GS 70
L ++ KL+L G GI +QGL ++NL LDLS+N LH GS
Sbjct: 593 LLSITKLELSGRGIVDLQGLESMENLIYLDLSNNEISNIDSIKKLINLKKLVLHKNKIGS 652
Query: 71 LEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
++ + +LT L+ LDLS N L L L LDL GI +I +
Sbjct: 653 IKVIESLTKLEELDLSNNLIGDITALGGLSQLTRLDLSRNGIVSINSL 700
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L ++ L LDLS N NI S + L NLKKL L I +I+ + L LE
Sbjct: 612 LESMENLIYLDLSNNEISNIDS-------IKKLINLKKLVLHKNKIGSIKVIESLTKLEE 664
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
LDLS+N L G + L L+ L LDLS N ++ L L NL+ L L + I+
Sbjct: 665 LDLSNN--LIGDITALGGLSQLTRLDLSRNGIVSINSLGGLINLQYLSLYENKIS 717
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
++L N+K+LD I + G+ + LE L+LS SL L LTNL+ +++S
Sbjct: 352 SDLENIKELDFHNAHIEKLNGIENMTALEKLNLSGTDIKDISL--LKYLTNLREVNISNT 409
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
L + ++ L+L ITT++ I++F
Sbjct: 410 SISDITALESSIYIRYLNLNKTEITTLEVIKKF 442
>gi|440751731|ref|ZP_20930934.1| leucine Rich Repeat family protein [Microcystis aeruginosa TAIHU98]
gi|440176224|gb|ELP55497.1| leucine Rich Repeat family protein [Microcystis aeruginosa TAIHU98]
Length = 263
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 8 QVLDLSANYNITSGSLTRL---------GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
Q++DL+ N+T+ RL LANLTNL L+L I I LA L NLE
Sbjct: 86 QIVDLTPLANLTNLIELRLRQNQIVNVNALANLTNLTHLNLQTNQIIDITSLANLTNLEV 145
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L LS N + LAN TNL+ L L NQ + LANL NL+ L L D I + I
Sbjct: 146 LLLSDNKI--KDITPLANFTNLRTLSLMDNQIVDVSPLANLNNLEVLFLSDNKIKDLTPI 203
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
LTNL+KL L I + LA L NL L L N ++ + LANLTNL L+L NQ
Sbjct: 74 LTNLQKLSLVNNQIVDLTPLANLTNLIELRLRQNQIVN--VNALANLTNLTHLNLQTNQI 131
Query: 91 LTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
+ LANL NL+ L L D I I + FT
Sbjct: 132 IDITSLANLTNLEVLLLSDNKIKDITPLANFT 163
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L L+L N I SL ANLTNL+ L L I I LA NL L
Sbjct: 115 LANLTNLTHLNLQTNQIIDITSL-----ANLTNLEVLLLSDNKIKDITPLANFTNLRTLS 169
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
L N + S LANL NL+VL LS N+
Sbjct: 170 LMDNQIVDVS--PLANLNNLEVLFLSDNK 196
>gi|46446912|ref|YP_008277.1| hypothetical protein pc1278 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400553|emb|CAF24002.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 731
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 68/132 (51%), Gaps = 13/132 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLK---NLE 57
L L LQ LDLS N+T L L A L L+ L L C T GLA LK NL+
Sbjct: 418 LRPLMALQHLDLSCCRNLTDAGLAHL--APLVALQHLCLSECTNLTGAGLAHLKPLVNLQ 475
Query: 58 ALDLSSNYYLHGSLEGLANLTNL---QVLDLSGNQNLTTLGLANLPN---LKTLDLRDCG 111
L+L+S Y L + GLA+LT L Q LDLS +NLT GLA+L L+ LDL C
Sbjct: 476 HLNLNSCYKLTDA--GLAHLTPLMALQHLDLSCCRNLTDAGLAHLRPLVALQHLDLNCCK 533
Query: 112 ITTIQGIQQFTS 123
T G+ T
Sbjct: 534 NFTDAGLTHLTP 545
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L L LQ LDLS N+T L L L L+ LDL+ C T GL L L AL
Sbjct: 493 LTPLMALQHLDLSCCRNLTDAGLAHLR--PLVALQHLDLNCCKNFTDAGLTHLTPLVALQ 550
Query: 60 --DLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
+LS L L L L L L+L+G N T GLA+L L+ L+L DC
Sbjct: 551 HLNLSCCRNLTDAGLAYLMPLVALSHLNLAGCHNFTDAGLAHLAPLVALQHLNLGDCYRL 610
Query: 114 TIQGIQQFTS 123
T G++ T
Sbjct: 611 TNAGLEHLTP 620
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L L LQ LDLS +T LT L L L LDL C T GLA L LEAL
Sbjct: 618 LTPLVALQHLDLSECEKLTDAGLTHL--VPLVALTHLDLSECDKLTDAGLAHLTPLEALQ 675
Query: 60 DLSSNYYLHGSLEGLANLTN---LQVLDLSGNQNLTTLGLANL 99
L+ N+ + GLA+LT LQ L L +N T +GLA+
Sbjct: 676 HLNLNWCDKLTDAGLAHLTPLLALQDLYLGYCKNFTEVGLAHF 718
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L N + L+ L L Y +T L L A L +L+ L+L C T GLA L L AL
Sbjct: 343 LKNCKNLKALHLQECYKLTDTGLVYL--APLVSLQYLNLFDCIKLTDAGLAHLTPLVALR 400
Query: 61 ----LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
+ N + L L L LQ LDLS +NLT GLA+L L L
Sbjct: 401 HLNLMGCNKLTNAGLMHLRPLMALQHLDLSCCRNLTDAGLAHLAPLVAL 449
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL---DL-S 62
LQ L+L++ Y +T L L L L+ LDL C T GLA L+ L AL DL
Sbjct: 474 LQHLNLNSCYKLTDAGLAHL--TPLMALQHLDLSCCRNLTDAGLAHLRPLVALQHLDLNC 531
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANL 99
+ L L L LQ L+LS +NLT GLA L
Sbjct: 532 CKNFTDAGLTHLTPLVALQHLNLSCCRNLTDAGLAYL 568
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 56/130 (43%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L L L L+L+ +N T L L A L L+ L+L C T GL L L AL
Sbjct: 568 LMPLVALSHLNLAGCHNFTDAGLAHL--APLVALQHLNLGDCYRLTNAGLEHLTPLVALQ 625
Query: 60 --DLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKT---LDLRDCGIT 113
DLS L L L L L LDLS LT GLA+L L+ L+L C
Sbjct: 626 HLDLSECEKLTDAGLTHLVPLVALTHLDLSECDKLTDAGLAHLTPLEALQHLNLNWCDKL 685
Query: 114 TIQGIQQFTS 123
T G+ T
Sbjct: 686 TDAGLAHLTP 695
>gi|334117579|ref|ZP_08491670.1| Adenylate cyclase [Microcoleus vaginatus FGP-2]
gi|333460688|gb|EGK89296.1| Adenylate cyclase [Microcoleus vaginatus FGP-2]
Length = 516
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LA+L L LDL N G + L A+LTNL +LDLDG I I+ LA L NL +LD
Sbjct: 193 LASLTNLTRLDLDGNV---IGDIKPL--ASLTNLTRLDLDGNVIGDIKPLASLTNLSSLD 247
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
L N G ++ LA+LTNL LDL LA+L NL L L D I I+ +
Sbjct: 248 LDDNQI--GDIKPLASLTNLMGLDLRRIVIGDIKPLASLTNLTDLSLDDNQIGDIKPLAS 305
Query: 121 FT 122
T
Sbjct: 306 LT 307
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA+LTNL L LD I I+ LA L NL L LSSN ++ LA+LTNL LDLSG
Sbjct: 281 LASLTNLTDLSLDDNQIGDIKPLASLTNLTRLVLSSNQI--RDIKPLASLTNLSSLDLSG 338
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N LA+L NL +LDL + I I+ + T
Sbjct: 339 NVIGDIKPLASLTNLSSLDLNNNKIGDIKPLASLT 373
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA+LTNL L LDG I I+ LA L NL L LSSN G ++ LA+LTNL LDLS
Sbjct: 413 LASLTNLSSLVLDGNVIGDIKALASLTNLAGLFLSSNVI--GDIKPLASLTNLSSLDLSD 470
Query: 88 NQNLTTLGLANLPNLKTLDL 107
N LA+L NL L L
Sbjct: 471 NHIGDIKPLASLTNLIELHL 490
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA+LTNL LDL G I I+ LA L NL +LDL++N G ++ LA+LT L L LSG
Sbjct: 325 LASLTNLSSLDLSGNVIGDIKPLASLTNLSSLDLNNNKI--GDIKPLASLTKLTELTLSG 382
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N LA+L NL +L L I I+ + T
Sbjct: 383 NVIGDIKPLASLTNLSSLVLFGNVIGDIKPLASLT 417
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LA+L L LDL N G + L A+LTNL LDL I I+ LA L NL L
Sbjct: 237 LASLTNLSSLDLDDNQ---IGDIKPL--ASLTNLMGLDLRRIVIGDIKPLASLTNLTDLS 291
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
L N G ++ LA+LTNL L LS NQ LA+L NL +LDL I I+ +
Sbjct: 292 LDDNQI--GDIKPLASLTNLTRLVLSSNQIRDIKPLASLTNLSSLDLSGNVIGDIKPLAS 349
Query: 121 FT 122
T
Sbjct: 350 LT 351
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA+LTNL L L G I I+ LA L NL +L L N G ++ LA+LTNL L LS
Sbjct: 391 LASLTNLSSLVLFGNVIGDIKPLASLTNLSSLVLDGNVI--GDIKALASLTNLAGLFLSS 448
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N LA+L NL +LDL D I I+ + T
Sbjct: 449 NVIGDIKPLASLTNLSSLDLSDNHIGDIKPLASLT 483
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA+LT L +L L+ I I+ LA L NL L LSSN G ++ LA+LTNL LDL G
Sbjct: 149 LASLTKLTELTLNNNKIGDIKPLASLTNLTDLVLSSNQV--GDIKPLASLTNLTRLDLDG 206
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N LA+L NL LDL I I+ + T
Sbjct: 207 NVIGDIKPLASLTNLTRLDLDGNVIGDIKPLASLT 241
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
LA+LTNL L L I I+ LA L NL +LDLS N+ G ++ LA+LTNL L LS
Sbjct: 434 ALASLTNLAGLFLSSNVIGDIKPLASLTNLSSLDLSDNHI--GDIKPLASLTNLIELHLS 491
Query: 87 GNQ 89
GN
Sbjct: 492 GNP 494
>gi|217964566|ref|YP_002350244.1| lpxtg-motif cell wall anchor domain-containing protein [Listeria
monocytogenes HCC23]
gi|386026659|ref|YP_005947435.1| putative peptidoglycan bound protein (LPXTG motif) [Listeria
monocytogenes M7]
gi|217333836|gb|ACK39630.1| lpxtg-motif cell wall anchor domain protein [Listeria monocytogenes
HCC23]
gi|336023240|gb|AEH92377.1| putative peptidoglycan bound protein (LPXTG motif) [Listeria
monocytogenes M7]
Length = 576
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 65/109 (59%), Gaps = 4/109 (3%)
Query: 17 NITSGSLTRLG-LANLTNLKKLDLDGCGITT--IQGLAKLKNLEALDLSSNYYLHGSLEG 73
NI+S T + NL+NL+KL + G +T+ I L L+ LE +DL+ + + + L
Sbjct: 80 NISSIKATNFDFIKNLSNLEKLTIMGYDVTSDGIPDLNHLQKLEYIDLARSRHNNTILTK 139
Query: 74 LANLTNLQVLDLSGNQNLTT-LGLANLPNLKTLDLRDCGITTIQGIQQF 121
++ L+ ++LS N ++T + L N+P L+ L+++ CG+ +GI++F
Sbjct: 140 ISEAPKLKTVNLSYNASITEFMPLKNMPALEDLNIQFCGVHDFRGIEEF 188
>gi|46446667|ref|YP_008032.1| hypothetical protein pc1033 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400308|emb|CAF23757.1| hypothetical protein pc1033 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 662
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNL---E 57
L L LQ L LS N+T L L L L+ LDL GC T GLA L L +
Sbjct: 320 LTPLTALQHLGLSGCQNLTDAGLAHL--TPLMGLQHLDLSGCQNLTDAGLAHLTPLTGLQ 377
Query: 58 ALDLS-SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
L+LS N L L LT LQ LDLSG QNLT GLA+L L+ LDL C
Sbjct: 378 HLNLSRCNKLTDAGLAHLTPLTGLQHLDLSGCQNLTDAGLAHLTPLTGLQHLDLSGCQNL 437
Query: 114 TIQGIQQFTS 123
T G+ T
Sbjct: 438 TDAGLAHLTP 447
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNL---E 57
L L LQ LDLS N+T L L LT L+ L+L C T GLA L L +
Sbjct: 345 LTPLMGLQHLDLSGCQNLTDAGLAHL--TPLTGLQHLNLSRCNKLTDAGLAHLTPLTGLQ 402
Query: 58 ALDLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
LDLS L L L LT LQ LDLSG QNLT GLA+L L+ L+L +C
Sbjct: 403 HLDLSGCQNLTDAGLAHLTPLTGLQHLDLSGCQNLTDAGLAHLTPLTGLQHLNLCNCRKF 462
Query: 114 TIQGIQQFTS 123
T G+ T
Sbjct: 463 TDNGLAHLTP 472
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 72/153 (47%), Gaps = 30/153 (19%)
Query: 1 LANLRYLQVLDLSANYNITS---------GSLTRLGLAN--------------LTNLKKL 37
L L LQ LDLS+ YN+T SL LGL + LT L+ L
Sbjct: 495 LTPLTALQHLDLSSCYNLTDVGLAHLTPLTSLQHLGLISCDKLTDAGLVHLKLLTGLQHL 554
Query: 38 DLDGCGITTIQGLAKLKNLEALD-LSSNYYLHGSLEGLANLTNL---QVLDLSGNQNLTT 93
+L C T GLA L L AL L N+ + GLA+LT+L Q LDL QNLT
Sbjct: 555 NLSNCKNLTDAGLAHLTPLTALQYLYLNWCRKLTDAGLAHLTSLTALQHLDLRYCQNLTD 614
Query: 94 LGLANLPN---LKTLDLRDCGITTIQGIQQFTS 123
GLA+L L+ LDL C T G+ +F +
Sbjct: 615 AGLAHLTPLTGLRHLDLSQCWRLTKAGLARFKT 647
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNL---E 57
L L LQ LDLS N+T L L LT L+ L+L C T GLA L L +
Sbjct: 420 LTPLTGLQHLDLSGCQNLTDAGLAHL--TPLTGLQHLNLCNCRKFTDNGLAHLTPLSVLQ 477
Query: 58 ALDLS-SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
L+LS N L L LT LQ LDLS NLT +GLA+L L +L
Sbjct: 478 HLNLSRCNKLTDVGLAHLTPLTALQHLDLSSCYNLTDVGLAHLTPLTSL 526
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD-LSSNY 65
L+VL ++T L L LT L+ L L C T GLA L L AL L+ +
Sbjct: 251 LKVLHFKECRHLTDAGLAHL--TPLTALQHLGLGQCWRLTNAGLAHLTPLTALQYLNLSE 308
Query: 66 YLHGSLEGLANLTNL---QVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQGIQ 119
Y + + GLA+LT L Q L LSG QNLT GLA+L L+ LDL C T G+
Sbjct: 309 YKNLTDAGLAHLTPLTALQHLGLSGCQNLTDAGLAHLTPLMGLQHLDLSGCQNLTDAGLA 368
Query: 120 QFTS 123
T
Sbjct: 369 HLTP 372
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 51/112 (45%), Gaps = 16/112 (14%)
Query: 26 LGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD---LSSNYYL-HGSLEGLANLTNLQ 81
L L + NLK L C T GLA L L AL L + L + L L LT LQ
Sbjct: 243 LALKSCENLKVLHFKECRHLTDAGLAHLTPLTALQHLGLGQCWRLTNAGLAHLTPLTALQ 302
Query: 82 VLDLSGNQNLTTLGLANLPNLKTL---------DLRDCG---ITTIQGIQQF 121
L+LS +NLT GLA+L L L +L D G +T + G+Q
Sbjct: 303 YLNLSEYKNLTDAGLAHLTPLTALQHLGLSGCQNLTDAGLAHLTPLMGLQHL 354
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L +L LQ LDL N+T L L LT L+ LDL C T GLA+ K L A
Sbjct: 595 LTSLTALQHLDLRYCQNLTDAGLAHL--TPLTGLRHLDLSQCWRLTKAGLARFKTLAA 650
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL-DLSSNY 65
LQ L+LS N+T L L LT L+ L L+ C T GLA L +L AL L Y
Sbjct: 551 LQHLNLSNCKNLTDAGLAHL--TPLTALQYLYLNWCRKLTDAGLAHLTSLTALQHLDLRY 608
Query: 66 YLHGSLEGLANLTNL---QVLDLSGNQNLTTLGLANLPNL 102
+ + GLA+LT L + LDLS LT GLA L
Sbjct: 609 CQNLTDAGLAHLTPLTGLRHLDLSQCWRLTKAGLARFKTL 648
>gi|386008060|ref|YP_005926338.1| leucine-rich repeat domain protein (LPXTG motif) [Listeria
monocytogenes L99]
gi|307570870|emb|CAR84049.1| leucine-rich repeat domain protein (LPXTG motif) [Listeria
monocytogenes L99]
Length = 593
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 65/109 (59%), Gaps = 4/109 (3%)
Query: 17 NITSGSLTRLG-LANLTNLKKLDLDGCGITT--IQGLAKLKNLEALDLSSNYYLHGSLEG 73
NI+S T + NL+NL+KL + G +T+ I L L+ LE +DL+ + + + L
Sbjct: 97 NISSIKATNFDFIKNLSNLEKLTIMGYDVTSDGIPDLNHLQKLEYIDLARSRHNNTILTK 156
Query: 74 LANLTNLQVLDLSGNQNLTT-LGLANLPNLKTLDLRDCGITTIQGIQQF 121
++ L+ ++LS N ++T + L N+P L+ L+++ CG+ +GI++F
Sbjct: 157 ISEAPKLKTVNLSYNASITEFMPLKNMPALEDLNIQFCGVHDFRGIEEF 205
>gi|254417119|ref|ZP_05030865.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196176097|gb|EDX71115.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 414
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L LTNLKK+DL IT + L+ L NLE LDLS N ++ L+ LTNL+ LDL
Sbjct: 112 PLVELTNLKKVDLSHNQITNVNPLSGLTNLEWLDLSRNQI--TNVNPLSELTNLEWLDLG 169
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
NQ L+ L NL+ L+L IT + I
Sbjct: 170 HNQITNISPLSGLTNLEFLNLSHNQITNFRII 201
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L L+ +DLS N IT+ + L+ LTNL+ LDL IT + L++L NLE LD
Sbjct: 113 LVELTNLKKVDLSHNQ-ITNVN----PLSGLTNLEWLDLSRNQITNVNPLSELTNLEWLD 167
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
L N ++ L+ LTNL+ L+LS NQ ++ L NLK + L + IT I + +
Sbjct: 168 LGHNQI--TNISPLSGLTNLEFLNLSHNQITNFRIISALINLKDIALNNNQITDIYPLAE 225
Query: 121 FT 122
T
Sbjct: 226 LT 227
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
LA LTNL+++ L+ ITT++ L +L NLE+L + +N + L+ LTNL+ L L+
Sbjct: 222 PLAELTNLRRISLNNNQITTVRPLVQLTNLESLYIGNNQI--TDIRPLSQLTNLRQLALN 279
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L+ L NL L L IT ++ + Q T
Sbjct: 280 HNQITDIRPLSQLTNLTGLALSHNQITDVRPLSQLT 315
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L+ LTNL L L IT ++ L++L NLE + L NY ++ L NL NL LDL
Sbjct: 288 PLSQLTNLTGLALSHNQITDVRPLSQLTNLEWIHL--NYNQITNITPLVNLNNLTGLDLH 345
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L L NLK +DLR IT I + T
Sbjct: 346 SNQVTNVTPLVQLKNLKWIDLRFNQITDISSLSGLT 381
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L+ LTNL+ L L I+ + L +L NL+ +DLS N ++ L+ LTNL+ LDLS
Sbjct: 90 PLSGLTNLRTLYLGSNLISDVSPLVELTNLKKVDLSHNQI--TNVNPLSGLTNLEWLDLS 147
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L+ L NL+ LDL IT I + T
Sbjct: 148 RNQITNVNPLSELTNLEWLDLGHNQITNISPLSGLT 183
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L+ LTNL+ + L+ IT I L L NL LDL SN ++ L L NL+ +DL
Sbjct: 310 PLSQLTNLEWIHLNYNQITNITPLVNLNNLTGLDLHSNQV--TNVTPLVQLKNLKWIDLR 367
Query: 87 GNQNLTTLGLANLPNLKTLDLR 108
NQ L+ L NL L L
Sbjct: 368 FNQITDISSLSGLTNLMRLYLE 389
>gi|148379742|ref|YP_001254283.1| hypothetical protein CBO1782 [Clostridium botulinum A str. ATCC
3502]
gi|153933744|ref|YP_001384039.1| hypothetical protein CLB_1717 [Clostridium botulinum A str. ATCC
19397]
gi|153934807|ref|YP_001387581.1| hypothetical protein CLC_1725 [Clostridium botulinum A str. Hall]
gi|148289226|emb|CAL83321.1| putative surface protein [Clostridium botulinum A str. ATCC 3502]
gi|152929788|gb|ABS35288.1| leucine rich repeat protein [Clostridium botulinum A str. ATCC
19397]
gi|152930721|gb|ABS36220.1| leucine rich repeat protein [Clostridium botulinum A str. Hall]
Length = 1359
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 6/97 (6%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLT+L+ LDL GI+ I L+KL+NL L L N L L NLTNL LDL G
Sbjct: 898 LENLTDLRVLDLSRTGISNISILSKLRNLNELYLGGNKI--TDLSYLENLTNLIKLDLVG 955
Query: 88 NQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N ++T++ L NL NL+ L L IT + IQ +++
Sbjct: 956 NNDITSIYALRNLINLRYLTL---PITNPKKIQDYSA 989
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 20/108 (18%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY----------------YLH----GS 70
L+++ KL+L G GI +QGL ++NL LDLS+N LH GS
Sbjct: 593 LSSITKLELSGRGIVDLQGLESMENLTYLDLSNNEISNIDSIKKLINLKKLVLHKNKIGS 652
Query: 71 LEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
++ + +LT L+ LDLS N L L L LDL GI +I +
Sbjct: 653 IKVIESLTKLEELDLSNNLIGDITALGGLSQLTRLDLSRNGIVSISSL 700
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L ++ L LDLS N NI S + L NLKKL L I +I+ + L LE
Sbjct: 612 LESMENLTYLDLSNNEISNIDS-------IKKLINLKKLVLHKNKIGSIKVIESLTKLEE 664
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
LDLS+N L G + L L+ L LDLS N ++ L L NL+ L L + I+
Sbjct: 665 LDLSNN--LIGDITALGGLSQLTRLDLSRNGIVSISSLGGLINLQYLSLYENKIS 717
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 24/123 (19%)
Query: 21 GSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN-----YYLHG------ 69
G LT + +++ +K+L++ I +++G+ LKNL LD+S N YL G
Sbjct: 152 GPLTYM---DVSGIKELNVHNKNIKSLKGIEYLKNLTKLDISDNNIKDISYLKGLDSLEL 208
Query: 70 ---------SLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ + N+ L+ ++LS N+ L +L NL LDLRD I I+ ++
Sbjct: 209 LNLYNNNIEDISPINNMEKLKDINLSKNKVKDISYLKDL-NLHHLDLRDNKIENIEVLKD 267
Query: 121 FTS 123
TS
Sbjct: 268 KTS 270
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
++L N+K+LD I + G+ + LE L+LS SL L LTNL+ +++S
Sbjct: 352 SDLENIKELDFHNAHIEKLNGIENMTALEKLNLSGTDIKDISL--LKYLTNLREVNISNT 409
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
L + ++ L+L ITT++ I++F
Sbjct: 410 SISDITALESSIYIRYLNLNKTEITTLEVIKKF 442
>gi|46447562|ref|YP_008927.1| hypothetical protein pc1928 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401203|emb|CAF24652.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 528
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 65/125 (52%), Gaps = 15/125 (12%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLK---KLDLDGCGITTIQGLAKLKNLEAL---D 60
LQ LDLS ++ LT +GLA+LT LK LDL C T GL L L AL D
Sbjct: 396 LQHLDLSQCWH-----LTDIGLAHLTPLKSLQHLDLSRCENLTDDGLVHLTPLTALQHLD 450
Query: 61 LSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQ 116
LS Y L L L LT LQ LDL G +NLT GLA+L L+ LDL C T
Sbjct: 451 LSYCYNLTDDGLAHLTPLTTLQHLDLMGCKNLTDDGLAHLTPLIALQYLDLIGCKNFTDD 510
Query: 117 GIQQF 121
G+ +F
Sbjct: 511 GLARF 515
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 14/113 (12%)
Query: 23 LTRLGLANL---TNLKKLDLDGCGITTIQGLAKLK---NLEALDLSSNYYLHGSLEGLAN 76
LT GLA+L T L+ L+L GC T GLA L L+ LDLS + H + +GLA+
Sbjct: 232 LTDAGLAHLKPLTALQHLNLSGCYHLTDVGLAHLTFLTGLQHLDLSQCW--HFTDDGLAH 289
Query: 77 LTNL---QVLDLSGNQNLTTLGLANLP---NLKTLDLRDCGITTIQGIQQFTS 123
LT+L Q L L G +NL GLA+L +L+ L+LR CG T G+
Sbjct: 290 LTSLTALQYLALMGCKNLIDAGLAHLKPLTSLQHLNLRGCGYLTDAGLAHLAP 342
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Query: 21 GSLTRLGLANL---TNLKKLDLDGCGITTIQGLAKLKNLEALD-LSSNYYLHGSLEGLAN 76
G LT GLA+L T L+ L+L C T GLA L+ L AL L+ + + +GLA+
Sbjct: 330 GYLTDAGLAHLAPLTGLQHLNLSKCENLTDVGLAHLRLLVALQYLNLDNCRKLTDDGLAH 389
Query: 77 LT---NLQVLDLSGNQNLTTLGLANLPNLKT---LDLRDCGITTIQGIQQFTS 123
LT NLQ LDLS +LT +GLA+L LK+ LDL C T G+ T
Sbjct: 390 LTPVTNLQHLDLSQCWHLTDIGLAHLTPLKSLQHLDLSRCENLTDDGLVHLTP 442
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLA---KLKNLE 57
L L+ LQ LDLS N+T L L LT L+ LDL C T GLA L L+
Sbjct: 415 LTPLKSLQHLDLSRCENLTDDGLVHL--TPLTALQHLDLSYCYNLTDDGLAHLTPLTTLQ 472
Query: 58 ALDLSSNYYLHGSLEGLANLTNL---QVLDLSGNQNLTTLGLANLPNL 102
LDL L + +GLA+LT L Q LDL G +N T GLA NL
Sbjct: 473 HLDLMGCKNL--TDDGLAHLTPLIALQYLDLIGCKNFTDDGLARFKNL 518
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 36/81 (44%), Gaps = 23/81 (28%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--------------------GLANLTNL---KKL 37
L L LQ LDLS YN+T L L GLA+LT L + L
Sbjct: 440 LTPLTALQHLDLSYCYNLTDDGLAHLTPLTTLQHLDLMGCKNLTDDGLAHLTPLIALQYL 499
Query: 38 DLDGCGITTIQGLAKLKNLEA 58
DL GC T GLA+ KNL A
Sbjct: 500 DLIGCKNFTDDGLARFKNLAA 520
>gi|406862132|gb|EKD15183.1| WD repeat domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1900
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 26 LGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
LG NL L LDL + T++GL +L++L L+L N S++ ++ L+ L L
Sbjct: 1535 LGGTNLQRLTDLDLKDNQVCTLRGLQELRSLVTLNLEDNSLCDISMDAAQTMSTLKYLKL 1594
Query: 86 SGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
SGN NL + ++ PNL+ L L + T+ G+
Sbjct: 1595 SGN-NLEAIDVSLFPNLRLLYLDRNRLGTVSGL 1626
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 30 NLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
+L NL+ +D+ G+ ++ L +L +L +N L+G++ L L L L GN
Sbjct: 1472 HLHNLQYIDVSNNGLESLSAFKSLVHLRSLRADNNKI--SGLDGVSQLDGLLSLRLRGNS 1529
Query: 90 NLT-TLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
+ LG NL L LDL+D + T++G+Q+ S
Sbjct: 1530 VRSLDLGGTNLQRLTDLDLKDNQVCTLRGLQELRS 1564
>gi|46446831|ref|YP_008196.1| hypothetical protein pc1197 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400472|emb|CAF23921.1| hypothetical protein pc1197 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 666
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 69/133 (51%), Gaps = 15/133 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLK---KLDLDGCGITTIQGLAKLKNLE 57
L L LQ L+LS + IT GLA+LT LK LDL C T GLA L L
Sbjct: 230 LTPLTSLQRLNLSKLWCITDA-----GLAHLTTLKALQHLDLSQCSKLTDDGLAHLTPLT 284
Query: 58 AL-DLSSNYYLHGSLEGLANLT---NLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDC 110
AL L NY + + GLA+LT LQ LDLS +NLT GLA+L + L+ LDL C
Sbjct: 285 ALQHLGLNYCENLTDAGLAHLTLLTGLQHLDLSNCKNLTDAGLAHLTSLMALQHLDLSWC 344
Query: 111 GITTIQGIQQFTS 123
T G+ TS
Sbjct: 345 LKLTDAGLAHLTS 357
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L L LQ L L+ N+T L L L LT L+ LDL C T GLA L +L AL
Sbjct: 280 LTPLTALQHLGLNYCENLTDAGLAHLTL--LTGLQHLDLSNCKNLTDAGLAHLTSLMALQ 337
Query: 60 --DLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
DLS L L L +LT LQ LDLS +NLT GLA+L + L+ L+L C
Sbjct: 338 HLDLSWCLKLTDAGLAHLTSLTGLQHLDLSNCKNLTDAGLAHLTSLMALQHLNLSWCLKL 397
Query: 114 TIQGIQQFTS 123
T G+ T
Sbjct: 398 TDAGLAHLTP 407
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L +L LQ LDLS + + L L L L+ L+L GC T GLA L L+AL
Sbjct: 429 LTSLTGLQHLDLSGSRKLIDAGLAHL--RPLVALQHLNLTGCWKLTDAGLAHLSPLKALQ 486
Query: 61 ---LSSNYYLHGS-LEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
LS L G+ L L L LQ LDLS NLT GLA+L L+ L+L C
Sbjct: 487 TLGLSWCQNLTGAGLAHLKPLVALQYLDLSNCNNLTDAGLAHLRPLVALQHLNLTGCWKL 546
Query: 114 TIQGIQQFTS 123
T G+ TS
Sbjct: 547 TDAGLAHLTS 556
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L +L LQ LDLS N+T L L +L L+ L+L C T GLA L L AL
Sbjct: 355 LTSLTGLQHLDLSNCKNLTDAGLAHL--TSLMALQHLNLSWCLKLTDAGLAHLTPLTALQ 412
Query: 60 --DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITT 114
+LS + L L +LT LQ LDLSG++ L GLA+L L+ L+L C T
Sbjct: 413 HLNLSRYNLTYAGLAHLTSLTGLQHLDLSGSRKLIDAGLAHLRPLVALQHLNLTGCWKLT 472
Query: 115 IQGIQQFTS 123
G+ +
Sbjct: 473 DAGLAHLSP 481
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 68/132 (51%), Gaps = 13/132 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLK---NLE 57
L L+ LQ LDLS +T L L LT L+ L L+ C T GLA L L+
Sbjct: 255 LTTLKALQHLDLSQCSKLTDDGLAHL--TPLTALQHLGLNYCENLTDAGLAHLTLLTGLQ 312
Query: 58 ALDLSSNYYLHGSLEGLANLTNL---QVLDLSGNQNLTTLGLANLPN---LKTLDLRDCG 111
LDLS+ L + GLA+LT+L Q LDLS LT GLA+L + L+ LDL +C
Sbjct: 313 HLDLSNCKNLTDA--GLAHLTSLMALQHLDLSWCLKLTDAGLAHLTSLTGLQHLDLSNCK 370
Query: 112 ITTIQGIQQFTS 123
T G+ TS
Sbjct: 371 NLTDAGLAHLTS 382
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 64/128 (50%), Gaps = 10/128 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L L LQ L+LS YN+T L L +LT L+ LDL G GLA L+ L AL
Sbjct: 405 LTPLTALQHLNLS-RYNLTYAGLAHL--TSLTGLQHLDLSGSRKLIDAGLAHLRPLVALQ 461
Query: 60 --DLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
+L+ + L L L+ L LQ L LS QNLT GLA+L L+ LDL +C
Sbjct: 462 HLNLTGCWKLTDAGLAHLSPLKALQTLGLSWCQNLTGAGLAHLKPLVALQYLDLSNCNNL 521
Query: 114 TIQGIQQF 121
T G+
Sbjct: 522 TDAGLAHL 529
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L +L LQ L+LS +T L L L L+ LDL C T +GL L+ L AL
Sbjct: 554 LTSLMALQHLNLSWCLKLTDAGLAHLK--PLVALQHLDLSNCNNLTDEGLTHLRPLVALQ 611
Query: 60 --DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANL 99
+LS L L LT LQ LDLS NLT GLA+
Sbjct: 612 HLNLSRYNLTDDGLAHLTPLTTLQYLDLSSCYNLTDAGLAHF 653
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L L LQ LDLS N+T L L L L+ L+L GC T GLA L +L AL
Sbjct: 504 LKPLVALQYLDLSNCNNLTDAGLAHL--RPLVALQHLNLTGCWKLTDAGLAHLTSLMALQ 561
Query: 60 DLSSNYYLHGSLEGLANL---TNLQVLDLSGNQNLTTLGLANLPNLKTL 105
L+ ++ L + GLA+L LQ LDLS NLT GL +L L L
Sbjct: 562 HLNLSWCLKLTDAGLAHLKPLVALQHLDLSNCNNLTDEGLTHLRPLVAL 610
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLA---KLKNLEALDLSS 63
++ LD N +T L L L N NLK L C + T GLA L +L+ L+LS
Sbjct: 186 IEALDFFNNIYLTDAHL--LALKNCKNLKILHFKNCRVITDAGLAHLTPLTSLQRLNLSK 243
Query: 64 NYYLHGSLEGLANLTN---LQVLDLSGNQNLTTLGLANLPNLKTL 105
+ + + GLA+LT LQ LDLS LT GLA+L L L
Sbjct: 244 LWCITDA--GLAHLTTLKALQHLDLSQCSKLTDDGLAHLTPLTAL 286
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 1 LANLRYLQVLDLSANYNIT-SGSLTRLGLANLTNLKKLD---LDGCGITTIQGLAKLKNL 56
LA+LR L L + N+T LT GLA+L+ LK L L C T GLA LK L
Sbjct: 451 LAHLRPLVALQ---HLNLTGCWKLTDAGLAHLSPLKALQTLGLSWCQNLTGAGLAHLKPL 507
Query: 57 EAL---DLSS-NYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
AL DLS+ N L L L LQ L+L+G LT GLA+L +L L
Sbjct: 508 VALQYLDLSNCNNLTDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLTSLMAL 560
>gi|387817978|ref|YP_005678323.1| hypothetical protein H04402_01777 [Clostridium botulinum H04402
065]
gi|322806020|emb|CBZ03587.1| internalin-like protein (LPXTG motif) Lmo0333 homolog [Clostridium
botulinum H04402 065]
Length = 1355
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 13/124 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L +LRYL + N N+T G L+ L NLT+L+ LDL GI+ I L KL+NL L
Sbjct: 874 LTSLRYLYL----NNMNLT-GDLS--FLENLTDLRVLDLSRTGISNISILDKLRNLSELY 926
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQ 119
L N + L L NLTNL LDL N ++T++ L NL NL+ L L IT + IQ
Sbjct: 927 LGGNNII--DLSSLENLTNLAKLDLVENNDITSIYALRNLINLRYLTL---PITNPKKIQ 981
Query: 120 QFTS 123
+++
Sbjct: 982 DYSA 985
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L ++ L LDLS N NI S + L NLKKL L I +I+ + LK LE
Sbjct: 608 LESMENLTYLDLSNNEISNIDS-------IKKLVNLKKLVLHKNKIGSIKSIESLKYLEE 660
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
LDLS+N L G + L L+ L LDLS N ++ L +L NL+ L L + I+
Sbjct: 661 LDLSNN--LIGDITALGGLSQLTRLDLSKNGIVSINSLGSLINLQYLSLYENKIS 713
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
L+++ KL+L G GI +QGL ++NL LDLS+N +++ + L NL+ L L N+
Sbjct: 589 LSSITKLELSGRGIVDLQGLESMENLTYLDLSNNEI--SNIDSIKKLVNLKKLVLHKNKI 646
Query: 91 LTTLGLANLPNLKTLDLRDC---GITTIQGIQQFT 122
+ + +L L+ LDL + IT + G+ Q T
Sbjct: 647 GSIKSIESLKYLEELDLSNNLIGDITALGGLSQLT 681
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ +L+YL+ LDLS N G +T LG L+ L +LDL GI +I L L NL+ L
Sbjct: 652 IESLKYLEELDLSNN---LIGDITALG--GLSQLTRLDLSKNGIVSINSLGSLINLQYLS 706
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDL--SGNQNLTTLGLANLPNLKTLDL 107
L N G E L L +L+ L L SG N + LA NL+ D
Sbjct: 707 LYENKISEGE-EYLKKLYSLRELYLKNSGVSNF-DVTLAYYNNLEKKDF 753
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 30 NLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
+L N+K+LD I + G+ + LE L+LS SL L L NL+ +++S
Sbjct: 353 DLENIKELDFHNAHIEKLNGIENMTALEKLNLSGTDIKDISL--LKCLINLKEVNISNTS 410
Query: 90 NLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
L N ++ L+L + +TT+Q I++F
Sbjct: 411 ISDITALKNSIYIRYLNLNETNVTTLQVIEKF 442
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 41/139 (29%)
Query: 6 YLQVLDLSANYNITSGSLTRLGLAN-LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN 64
Y +D + N++ +++RL +++ LTN ++LDG IQ + NL +++L
Sbjct: 787 YKSEVDTITDLNLSEEAISRLNISSRLTNTNVINLDG-----IQNFS---NLHSINLRG- 837
Query: 65 YYLHGSLEGLANLTNLQ---VLDLSGNQ-NLTTL------------------------GL 96
HG LEGL NL ++ LDL G + N T+L L
Sbjct: 838 ---HGKLEGLENLMPIRGLIKLDLQGREINYTSLYYIKYLTSLRYLYLNNMNLTGDLSFL 894
Query: 97 ANLPNLKTLDLRDCGITTI 115
NL +L+ LDL GI+ I
Sbjct: 895 ENLTDLRVLDLSRTGISNI 913
>gi|26449526|dbj|BAC41889.1| unknown protein [Arabidopsis thaliana]
gi|29029064|gb|AAO64911.1| At1g58190 [Arabidopsis thaliana]
gi|62319855|dbj|BAD93894.1| hypothetical protein [Arabidopsis thaliana]
Length = 932
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDG---CGITTIQGLAKLKNLE 57
L +L L++LDLS N + +G + GLA L L LDL G +GL +LKNL+
Sbjct: 172 LKDLSNLELLDLSGN--LLNGPVP--GLAVLHKLHALDLSDNTFSGSLGREGLCQLKNLQ 227
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRD 109
LDLS N + + ++LT LQVLD+S NQ TL ++NL +L+ L L D
Sbjct: 228 ELDLSQNEFTGPFPQCFSSLTQLQVLDMSSNQFNGTLPSVISNLDSLEYLSLSD 281
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNLEA 58
LA L L LDLS N SGSL R GL L NL++LDL T Q + L L+
Sbjct: 195 LAVLHKLHALDLSDN--TFSGSLGREGLCQLKNLQELDLSQNEFTGPFPQCFSSLTQLQV 252
Query: 59 LDLSSNYYLHGSLEG-LANLTNLQVLDLSGNQNLTTLG---LANLPNLKTLDL 107
LD+SSN + +G+L ++NL +L+ L LS N+ +ANL LK L
Sbjct: 253 LDMSSNQF-NGTLPSVISNLDSLEYLSLSDNKFEGFFSFDLIANLSKLKVFKL 304
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 26/92 (28%)
Query: 44 ITTIQGLAKLKNLEALDLSSNYY------------------LHG-------SLEGLANLT 78
I + L KLK LE LD+ +N LHG ++ L +L+
Sbjct: 117 IHGYKSLGKLKKLEILDMGNNEVNNSVLPFLNAASSLRTLILHGNNMESTFPMKELKDLS 176
Query: 79 NLQVLDLSGN-QNLTTLGLANLPNLKTLDLRD 109
NL++LDLSGN N GLA L L LDL D
Sbjct: 177 NLELLDLSGNLLNGPVPGLAVLHKLHALDLSD 208
>gi|334183409|ref|NP_176115.2| receptor like protein 9 [Arabidopsis thaliana]
gi|332195389|gb|AEE33510.1| receptor like protein 9 [Arabidopsis thaliana]
Length = 932
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDG---CGITTIQGLAKLKNLE 57
L +L L++LDLS N + +G + GLA L L LDL G +GL +LKNL+
Sbjct: 172 LKDLSNLELLDLSGN--LLNGPVP--GLAVLHKLHALDLSDNTFSGSLGREGLCQLKNLQ 227
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRD 109
LDLS N + + ++LT LQVLD+S NQ TL ++NL +L+ L L D
Sbjct: 228 ELDLSQNEFTGPFPQCFSSLTQLQVLDMSSNQFNGTLPSVISNLDSLEYLSLSD 281
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNLEA 58
LA L L LDLS N SGSL R GL L NL++LDL T Q + L L+
Sbjct: 195 LAVLHKLHALDLSDN--TFSGSLGREGLCQLKNLQELDLSQNEFTGPFPQCFSSLTQLQV 252
Query: 59 LDLSSNYYLHGSLEG-LANLTNLQVLDLSGNQNLTTLG---LANLPNLKTLDL 107
LD+SSN + +G+L ++NL +L+ L LS N+ +ANL LK L
Sbjct: 253 LDMSSNQF-NGTLPSVISNLDSLEYLSLSDNKFEGFFSFDLIANLSKLKVFKL 304
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 44/92 (47%), Gaps = 26/92 (28%)
Query: 44 ITTIQGLAKLKNLEALDLSSNYY------------------LHG-SLEG------LANLT 78
I + L KLK LE LD+ +N LHG ++EG L +L+
Sbjct: 117 IHGYKSLGKLKKLEILDMGNNEVNNSVLPFLNAASSLRTLILHGNNMEGTFPMKELKDLS 176
Query: 79 NLQVLDLSGN-QNLTTLGLANLPNLKTLDLRD 109
NL++LDLSGN N GLA L L LDL D
Sbjct: 177 NLELLDLSGNLLNGPVPGLAVLHKLHALDLSD 208
>gi|441470961|emb|CCQ20716.1| Internalin-I [Listeria monocytogenes]
gi|441474088|emb|CCQ23842.1| Internalin-I [Listeria monocytogenes N53-1]
Length = 593
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 12/124 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT--IQGLAKLKNLEA 58
L N+ L + +++A+Y + L++L+KL ++G + I L+ L NL
Sbjct: 93 LKNITTLSINNINASYE---------PIQTLSSLEKLVINGENVNADIIPDLSVLSNLTF 143
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQG 117
LDLS ++N+ NL LD+S N+ +T + L NLP+L+ L + +C IT +G
Sbjct: 144 LDLSRTNIDDTIFSKISNIPNLNKLDISNNKGITKISELNNLPSLQELRVSNCQITNFKG 203
Query: 118 IQQF 121
I++F
Sbjct: 204 IEKF 207
>gi|189094671|emb|CAQ57338.1| expression site-associated gene 8 (ESAG8) protein [Trypanosoma
brucei brucei]
gi|189094684|emb|CAQ57353.1| expression site-associated gene 8 (ESAG8) protein [Trypanosoma
brucei brucei]
Length = 630
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 68/126 (53%), Gaps = 7/126 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQGLAKLKNLEAL 59
+A +R L+ L LS +N+T G L L++L++LD+ GC + + L L NL+ L
Sbjct: 273 IAGVRSLEKLSLSGCWNVTKGLEE---LCKLSSLRELDISGCPVLGSAVVLRNLINLKVL 329
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
+S N L GL L L+ L+LSG +++LG +ANL NLK L + C + G
Sbjct: 330 SVS-NCKNFKDLNGLERLVKLEKLNLSGCHGVSSLGFVANLSNLKELSISGCESLVCFDG 388
Query: 118 IQQFTS 123
+Q +
Sbjct: 389 LQDLNN 394
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L L L+ L+LS + ++S +ANL+NLK+L + GC + GL L NLE L
Sbjct: 343 LERLVKLEKLNLSGCHGVSSLGF----VANLSNLKELSISGCESLVCFDGLQDLNNLEVL 398
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCG 111
L + ++ + NL+ ++ LDLSG + +T+L GL L+ L L CG
Sbjct: 399 YL-RDVKSFTNVGAIKNLSKMRELDLSGCERITSLSGLETFKRLEELSLEGCG 450
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 43/105 (40%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEALDL 61
NLR + VL+LS N+ S GL LT L++L L GC ITTI + L+NL+ L
Sbjct: 506 NLRNVCVLELSCCENLEDLS----GLQCLTGLEELYLIGCEEITTIGVVGNLRNLKCLST 561
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT---LGLANLPNLK 103
L L GL L NL+ LDLSG L++ + L +LP L+
Sbjct: 562 CWCANLK-ELGGLERLVNLEKLDLSGCCGLSSSVFMELMSLPKLQ 605
>gi|47097249|ref|ZP_00234810.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|258612143|ref|ZP_05267987.2| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|386046941|ref|YP_005965273.1| hypothetical protein [Listeria monocytogenes J0161]
gi|47014374|gb|EAL05346.1| conserved hypothetical protein [Listeria monocytogenes serotype
1/2a str. F6854]
gi|258608880|gb|EEW21488.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|345533932|gb|AEO03373.1| hypothetical protein LMOG_00424 [Listeria monocytogenes J0161]
Length = 609
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 12/124 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT--IQGLAKLKNLEA 58
L N+ L + +++A+Y + L++L+KL ++G + I L+ L NL
Sbjct: 93 LKNITTLSINNINASYE---------PIQTLSSLEKLVINGENVNADIIPDLSVLSNLTF 143
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQG 117
LDLS ++N+ NL LD+S N+ +T + L NLP+L+ L + +C IT +G
Sbjct: 144 LDLSRTNIDDTIFSKISNIPNLNKLDISNNKGITKISELNNLPSLQELRVSNCQITNFKG 203
Query: 118 IQQF 121
I++F
Sbjct: 204 IEKF 207
>gi|422421355|ref|ZP_16498308.1| internalin A, partial [Listeria seeligeri FSL S4-171]
gi|313638974|gb|EFS03990.1| internalin A [Listeria seeligeri FSL S4-171]
Length = 493
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 68/132 (51%), Gaps = 20/132 (15%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEA 58
++ L Y++ L + T S+T L L NLT L +D D G I ++ LA L NLE
Sbjct: 90 ISGLEYMENL---TGIDFTYCSVTDLTPLTNLTKLTYVDFDENGNIVNLEPLAGLTNLET 146
Query: 59 LDLSSNYYLHGSLEG--------LANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDC 110
L+L G+ EG LANLTNL+ LDL GN + L+ L NL++LD+ +
Sbjct: 147 LNL-------GAFEGNSVVDISSLANLTNLKALDLEGNNIVDVSALSGLTNLESLDIYNN 199
Query: 111 GITTIQGIQQFT 122
I+ I + T
Sbjct: 200 EISDISALSSLT 211
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 57/111 (51%), Gaps = 26/111 (23%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
LANLTNLK LDL+G I + L+ L NLE+LD+ +N + L++LTNL L L
Sbjct: 162 SLANLTNLKALDLEGNNIVDVSALSGLTNLESLDIYNNEI--SDISALSSLTNLNSLFLG 219
Query: 87 GN-----------QNLTTL-----GLAN--------LPNLKTLDLRDCGIT 113
N QNLT L GL N L +LKTL ++D IT
Sbjct: 220 ANTISDLTPLTSMQNLTILESRGNGLVNKDLEIINSLSSLKTLRMQDNDIT 270
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 30 NLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
+L ++ +L+ GI++I GL ++NL +D + Y L L NLT L +D N
Sbjct: 73 DLDSITELECTSAGISSISGLEYMENLTGIDFT--YCSVTDLTPLTNLTKLTYVDFDENG 130
Query: 90 NLTTL-GLANLPNLKTLDL 107
N+ L LA L NL+TL+L
Sbjct: 131 NIVNLEPLAGLTNLETLNL 149
>gi|254911963|ref|ZP_05261975.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|293589926|gb|EFF98260.1| conserved hypothetical protein [Listeria monocytogenes J2818]
Length = 608
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 12/124 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT--IQGLAKLKNLEA 58
L N+ L + +++A+Y + L++L+KL ++G + I L+ L NL
Sbjct: 92 LKNITTLSINNINASYE---------PIQTLSSLEKLVINGENVNADIIPDLSVLSNLTF 142
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQG 117
LDLS ++N+ NL LD+S N+ +T + L NLP+L+ L + +C IT +G
Sbjct: 143 LDLSRTNIDDTIFSKISNIPNLNKLDISNNKGITKISELNNLPSLQELRVSNCQITNFKG 202
Query: 118 IQQF 121
I++F
Sbjct: 203 IEKF 206
>gi|443712749|gb|ELU05913.1| hypothetical protein CAPTEDRAFT_171884 [Capitella teleta]
Length = 276
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 30 NLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN- 88
+ NL+ L L G+TT++G KL NL L+LS N + GSL L NL L+LSGN
Sbjct: 37 DFKNLESLSLINVGLTTLKGFPKLPNLRKLELSDN-RISGSLNLLNGCPNLSYLNLSGNK 95
Query: 89 -QNLTTL-GLANLPNLKTLDLRDCGITTI 115
+++ TL L N +L+ LDL +C +T I
Sbjct: 96 IKDIPTLEPLKNFESLRNLDLFNCEVTNI 124
>gi|434403391|ref|YP_007146276.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
gi|428257646|gb|AFZ23596.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
Length = 938
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTIQ-GLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
+A L NL LDL G ITT+ +AKL NL +L L +N + + +A L NL LDL
Sbjct: 181 AIAKLHNLTSLDLSGNRITTLPDAIAKLHNLTSLSLWNNG-ITTLPDAIAKLHNLTSLDL 239
Query: 86 SGNQNLTTL--GLANLPNLKTLDLRDCGITTI 115
SGN+ +TTL +A L NL TLDLR ITT+
Sbjct: 240 SGNR-ITTLPDAIAKLQNLSTLDLRGNEITTL 270
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTIQ-GLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
+A L NL LDL GITT+ +AKL NL L+LS N + + +A L NL L+L
Sbjct: 89 AIAQLQNLNSLDLSYNGITTLPDAIAKLHNLTTLNLSVN-KITTLPDAIAKLHNLTTLNL 147
Query: 86 SGNQNLTTL--GLANLPNLKTLDLRDCGITTI 115
S N+ + TL +A L NL +L+L ITT+
Sbjct: 148 SVNR-IRTLPDAIAKLHNLTSLNLNGNRITTL 178
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 31 LTNLKKLDLDGCGITTIQ-GLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
LT L++LDL +TT+ +AKL+NL L LS N + + +A L NL LDLS N
Sbjct: 47 LTWLEELDLSRNEMTTLPDAIAKLQNLSTLYLSHN-GITTLPDAIAQLQNLNSLDLSYN- 104
Query: 90 NLTTL--GLANLPNLKTLDLRDCGITTI 115
+TTL +A L NL TL+L ITT+
Sbjct: 105 GITTLPDAIAKLHNLTTLNLSVNKITTL 132
>gi|9964581|ref|NP_064770.1| internalin [Amsacta moorei entomopoxvirus 'L']
gi|9964606|ref|NP_065061.1| similar to internalin A precursor [Amsacta moorei entomopoxvirus
'L']
gi|9944790|gb|AAG02973.1|AF250284_267 AMVITR01 [Amsacta moorei entomopoxvirus 'L']
gi|9944815|gb|AAG02998.1| AMVITR01 [Amsacta moorei entomopoxvirus 'L']
Length = 460
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNLK L G I I+ L L NLE LD S + SL+G+ NL NL+ LD S
Sbjct: 288 LENLTNLKNLICYGINIDFIEILKNLINLEELDCSETKIV--SLKGIENLINLKELDCSY 345
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ + G+ NL NLK L DC T I ++Q
Sbjct: 346 TKINSLKGIENLINLKKL---DCSYTKIDSLKQ 375
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD----LSSNYYLHGSLEGLANLTNLQV 82
G+ NL NL+KLD C T+I L ++KNL L +N Y SL+ L NL NL+
Sbjct: 177 GIENLINLEKLD---CSYTSINSLKEIKNLINLKKLECYETNIY---SLKELQNLINLKK 230
Query: 83 LDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
LD S + + L NL NLK LD + I +++GI+
Sbjct: 231 LDCSYTKINSLKELQNLINLKKLDFHNTNIYSLKGIE 267
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 20/112 (17%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS----------------SNYYLHG-- 69
L NL NLKKLD I +++G+ L N+E L+ S N +G
Sbjct: 244 LQNLINLKKLDFHNTNIYSLKGIENLINIEKLNCSNTNIDSLKYLENLTNLKNLICYGIN 303
Query: 70 --SLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
+E L NL NL+ LD S + ++ G+ NL NLK LD I +++GI+
Sbjct: 304 IDFIEILKNLINLEELDCSETKIVSLKGIENLINLKELDCSYTKINSLKGIE 355
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 5/118 (4%)
Query: 4 LRYLQ-VLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL-DL 61
L YL+ +++L+ Y + + G+ NL NLK+ D C T I L ++KNL L L
Sbjct: 109 LVYLKNLINLTELYCFETNIYSLKGIENLINLKEFD---CSYTLIDSLKEIKNLINLQKL 165
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
+ ++ + SLEG+ NL NL+ LD S + + NL NLK L+ + I +++ +Q
Sbjct: 166 NCSHTIIYSLEGIENLINLEKLDCSYTSINSLKEIKNLINLKKLECYETNIYSLKELQ 223
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 24/114 (21%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLD--- 84
L NL NL++LD I +++G+ L NL+ LD S Y SL+G+ NL NL+ LD
Sbjct: 310 LKNLINLEELDCSETKIVSLKGIENLINLKELDCS--YTKINSLKGIENLINLKKLDCSY 367
Query: 85 -----LSGNQNLTTL--------------GLANLPNLKTLDLRDCGITTIQGIQ 119
L +NL L G+ NL NLK L + I +++GI+
Sbjct: 368 TKIDSLKQTKNLINLEQIHCYVTELDSLKGIENLINLKKLFCHNTKINSLKGIE 421
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH-GSLEGLANLTNLQVLDL 85
G+ NL NLKKLD C T I L + KNL L+ Y SL+G+ NL NL+ L
Sbjct: 353 GIENLINLKKLD---CSYTKIDSLKQTKNLINLEQIHCYVTELDSLKGIENLINLKKL-F 408
Query: 86 SGNQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQ 119
N + +L G+ NL NL+ L + I +++GI+
Sbjct: 409 CHNTKINSLKGIENLINLEILYCNNTNIISLEGIK 443
>gi|359459073|ref|ZP_09247636.1| GTPase [Acaryochloris sp. CCMEE 5410]
Length = 1082
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 66/111 (59%), Gaps = 9/111 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
LA+L L LDL N +TS LA+L NLK+L L +T I Q LA+L+NL L
Sbjct: 125 LAHLENLNKLDLRDN-QLTS---VPPELAHLENLKELYLSANQLTHIPQELAQLRNLTLL 180
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLR 108
LS+N L G LA+L NL+VL L NQ LT+L LA+L NL+ L LR
Sbjct: 181 SLSAN-QLTGVPPALAHLENLEVLSLRTNQ-LTSLPPELAHLANLRELYLR 229
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 28 LANLTNLKKLDLDGCGITTIQG-LAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
LA L L LDL +T++ LA+LKNL L LS+N + + LE L +L NL+ LD
Sbjct: 56 LAQLRKLTALDLSNNQLTSLPPELAQLKNLTLLYLSNNQFTNIPLE-LTHLVNLRELDCH 114
Query: 87 GNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
NQ LT++ LA+L NL LDLRD +T++
Sbjct: 115 SNQ-LTSVPPELAHLENLNKLDLRDNQLTSV 144
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 66/142 (46%), Gaps = 34/142 (23%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTIQG-LAKLKNLE 57
LA+L L+VL L N LT L LA+L NL++L L + + LA L++L
Sbjct: 194 LAHLENLEVLSLRTN------QLTSLPPELAHLANLRELYLRSNKLINVPPELAHLEHLT 247
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ------------NLTTL-----GLANLP 100
L LS N E A L NL+ L LSGNQ NLT L LANLP
Sbjct: 248 LLSLSYNQLTSLPPE-FAQLKNLKELHLSGNQLTSLPPEFAQLKNLTWLYLRSNQLANLP 306
Query: 101 -------NLKTLDLRDCGITTI 115
NL LDLRD ++ I
Sbjct: 307 PEFAQLKNLTELDLRDNQLSNI 328
>gi|168044488|ref|XP_001774713.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674013|gb|EDQ60528.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 529
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 65/117 (55%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCG--ITTIQGLAKLKNL 56
LANL L+ LDLS+ SL RL L NL++L +LDL GC I+ L L +L
Sbjct: 62 LANLSSLKELDLSS-----CSSLRRLPNELENLSSLIRLDLSGCSSLISLPNELRNLSSL 116
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCG 111
E LDLS L LANL++L L LSG +LT+L L NL +L+ L L +C
Sbjct: 117 EELDLSHCSSLINLPNELANLSSLTRLVLSGCSSLTSLPNELENLSSLEELRLNNCS 173
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 64/117 (54%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCG-ITTIQG-LAKLKNL 56
L NL L+ LDLS SLT L LANL++L +LDL GC +T++ L L +L
Sbjct: 182 LRNLSSLEELDLSH-----CSSLTNLPNELANLSSLTRLDLSGCSSLTSLPNELTNLSSL 236
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCG 111
LDLS L L NL++L LDLSG +LT+L L NL +L LDL C
Sbjct: 237 TRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCS 293
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 28 LANLTNLKKLDLDGCG-ITTIQG-LAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
LANL+NL++LDL C +T++ LA L +L+ LDLSS L L NL++L LDL
Sbjct: 38 LANLSNLRRLDLRYCSSLTSLPNELANLSSLKELDLSSCSSLRRLPNELENLSSLIRLDL 97
Query: 86 SGNQNLTTLG--LANLPNLKTLDLRDCG 111
SG +L +L L NL +L+ LDL C
Sbjct: 98 SGCSSLISLPNELRNLSSLEELDLSHCS 125
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCG-ITTIQG-LAKLKNL 56
LANL L LDLS SLT L L NL++L +LDL GC +T++ L L +L
Sbjct: 206 LANLSSLTRLDLSG-----CSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELTNLSSL 260
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCG 111
LDLS L L NL++L LDLSG +LT+L L NL L+ L L C
Sbjct: 261 TRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELENLSFLEELGLNHCS 317
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 64/117 (54%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCG-ITTIQG-LAKLKNL 56
LANL L L LS SLT L L NL++L++L L+ C +T++ L L +L
Sbjct: 134 LANLSSLTRLVLSG-----CSSLTSLPNELENLSSLEELRLNNCSSLTSLPNKLRNLSSL 188
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCG 111
E LDLS L LANL++L LDLSG +LT+L L NL +L LDL C
Sbjct: 189 EELDLSHCSSLTNLPNELANLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCS 245
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 69/136 (50%), Gaps = 25/136 (18%)
Query: 1 LANLRYLQVLDLSANYNITS--------GSLTRLGLA-------------NLTNLKKLDL 39
L NL L LDLS ++TS SLTRL L+ NL+ L++L L
Sbjct: 254 LTNLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELENLSFLEELGL 313
Query: 40 DGCG-ITTIQG-LAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-- 95
+ C +T++ L L +L LDLS L L NL++L LDLSG +LT+L
Sbjct: 314 NHCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNE 373
Query: 96 LANLPNLKTLDLRDCG 111
LAN+ +L TL LR C
Sbjct: 374 LANISSLTTLYLRGCS 389
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 21 GSLTRLG--LANLTNLKKLDLDGCGITT--IQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
SLT L L NL++L++LDL C T LA L +L LDLS L L N
Sbjct: 173 SSLTSLPNKLRNLSSLEELDLSHCSSLTNLPNELANLSSLTRLDLSGCSSLTSLPNELTN 232
Query: 77 LTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCG 111
L++L LDLSG +LT+L L NL +L LDL C
Sbjct: 233 LSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCS 269
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 69/165 (41%), Gaps = 59/165 (35%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITT------------ 46
L NL L LDLS SLT L L NL++L +LDL GC T
Sbjct: 326 LTNLSSLTRLDLSG-----CSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELANISSL 380
Query: 47 ----IQGLAKLKNL--EALDLSS--NYYLHG--------------------------SLE 72
++G + L++L E++ +SS Y HG SL+
Sbjct: 381 TTLYLRGCSSLRSLPNESVHISSLTILYFHGYVSLTSLLNELVNLSSLMTLDLNGCSSLK 440
Query: 73 GLAN----LTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCG 111
L N T+L +LDLSG +LT+L NL +LK L L C
Sbjct: 441 SLPNELTNFTSLTILDLSGRLSLTSLPNEFTNLSSLKELVLSHCS 485
>gi|414076287|ref|YP_006995605.1| hypothetical protein ANA_C11003 [Anabaena sp. 90]
gi|413969703|gb|AFW93792.1| leucine-rich repeat-containing protein [Anabaena sp. 90]
Length = 474
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL L LDL N I+ L+NLTNL L+L G I+ I+ L+ L L +L
Sbjct: 169 LSNLTKLTSLDLWGNQ-ISDIK----PLSNLTNLTFLNLVGNKISDIKPLSNLTKLTSLG 223
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
LS N ++ L+N TNL LDL GNQ T L+NL L +LDL I+ I+ +
Sbjct: 224 LSKNKI--SDIKSLSNFTNLTKLDLVGNQISDTTPLSNLTKLTSLDLWGNQISDIKPLSN 281
Query: 121 FT 122
T
Sbjct: 282 LT 283
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L+NLT L L L I+ I+ L+ L L +L LS N ++ L+NLT L LDL
Sbjct: 102 PLSNLTKLTSLGLSKNKISDIKSLSNLTKLTSLGLSKNKI--SDIKSLSNLTKLTKLDLV 159
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
GNQ T L+NL L +LDL I+ I+ + T
Sbjct: 160 GNQISDTTPLSNLTKLTSLDLWGNQISDIKPLSNLT 195
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L+NLT L LDL G I+ I+ L+ L NL L L N +++ L+NLTNL L LS
Sbjct: 256 PLSNLTKLTSLDLWGNQISDIKPLSNLTNLTFLILWGNQI--SNIKPLSNLTNLTSLTLS 313
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
NQ L+NL NL LDL I+ I+ +
Sbjct: 314 LNQISDIKPLSNLTNLTYLDLWGNKISDIKPL 345
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL L LDL N I+ L+NLTNL L L G I+ I+ L+ L NL +L
Sbjct: 257 LSNLTKLTSLDLWGNQ-ISDIK----PLSNLTNLTFLILWGNQISNIKPLSNLTNLTSLT 311
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
LS N ++ L+NLTNL LDL GN+
Sbjct: 312 LSLNQI--SDIKPLSNLTNLTYLDLWGNK 338
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
I+ I+ L+ L NL L LS N ++ L+NLTNL L LS N+ L+NL NL
Sbjct: 383 ISDIKPLSSLTNLTFLILSKNQI--SDIKPLSNLTNLTSLGLSENKISDIKPLSNLTNLT 440
Query: 104 TLDLRDCGITTIQGIQQFT 122
L L + I+ I+ + T
Sbjct: 441 YLSLWENPISDIKPLSNLT 459
>gi|418752849|ref|ZP_13309106.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|409966801|gb|EKO34641.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
Length = 398
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 67/120 (55%), Gaps = 13/120 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTI-QGLAKLKNLE 57
+ NL+ LQ LDL N LT L + NL NL+ LDL +TT+ + + L+NL+
Sbjct: 201 IGNLQNLQTLDLGRN------QLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQ 254
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
LDL N L E + NL NLQ LDL GNQ L TL + NL NL+ LDL +TT+
Sbjct: 255 TLDLGRNQ-LTTLPEEIGNLQNLQTLDLEGNQ-LATLPEEIGNLQNLQKLDLEGNQLTTL 312
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 28 LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+ L NL+ LDL + T+ + + KL+NL+ LDLS N E + L NLQ L+L+
Sbjct: 132 IGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKE-IGQLQNLQKLNLN 190
Query: 87 GNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
NQ LTTL + NL NL+TLDL +TT+
Sbjct: 191 SNQ-LTTLSKEIGNLQNLQTLDLGRNQLTTL 220
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 45 TTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNL 102
T + + KL+NL LDLSSN + E + L NLQ LDLS NQ LTTL + L NL
Sbjct: 127 TLPKEIGKLQNLRDLDLSSNQLMTLPKE-IGKLQNLQKLDLSHNQ-LTTLPKEIGQLQNL 184
Query: 103 KTLDLRDCGITTI 115
+ L+L +TT+
Sbjct: 185 QKLNLNSNQLTTL 197
>gi|75907715|ref|YP_322011.1| small GTP-binding protein domain-containing protein [Anabaena
variabilis ATCC 29413]
gi|75701440|gb|ABA21116.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC
29413]
Length = 1107
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 64/118 (54%), Gaps = 9/118 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ANL L LDL N IT +ANLTNL +LDL IT I + +A L NL L
Sbjct: 191 IANLTNLTQLDLGDN-QITE---IPKAIANLTNLTQLDLGDNQITEIPKAIANLTNLTHL 246
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGITTI 115
L SN E +ANLTNL LDLS NQ +T + +ANL NL L L D IT I
Sbjct: 247 ILFSNQITEIP-EAIANLTNLMQLDLSYNQ-ITEIPKAIANLTNLTQLVLSDNKITEI 302
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 24 TRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQV 82
T +A LTNL +LDL IT I + +A L NL L L SN E +ANLTNL
Sbjct: 141 TPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQITEIP-EAIANLTNLTQ 199
Query: 83 LDLSGNQNLTTL--GLANLPNLKTLDLRDCGITTI 115
LDL NQ +T + +ANL NL LDL D IT I
Sbjct: 200 LDLGDNQ-ITEIPKAIANLTNLTQLDLGDNQITEI 233
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 67/133 (50%), Gaps = 30/133 (22%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ANL L LDLS N IT T +ANLTNL +L + IT I + +AKL NL L
Sbjct: 306 IANLTNLTQLDLSDN-KITEIPET---IANLTNLTELYFNYNKITQIAEAIAKLTNLTEL 361
Query: 60 DLSSNY-----------------YLHGS-----LEGLANLTNLQVLDLSGNQNLTTL--G 95
LSSN YL+ + E +A LTNL L L GNQ +T +
Sbjct: 362 HLSSNQITQIPEAIANLTNLTELYLNYNKITQIAEAIAKLTNLTELHLDGNQ-ITQIPEA 420
Query: 96 LANLPNLKTLDLR 108
L +LP L+ LDLR
Sbjct: 421 LESLPKLEKLDLR 433
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
+ANLTNL +LDL IT I + +A L NL L LS N E +ANLTNL LDL
Sbjct: 259 AIANLTNLMQLDLSYNQITEIPKAIANLTNLTQLVLSDNKITEIP-EAIANLTNLTQLDL 317
Query: 86 SGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
S N+ +T + +ANL NL L IT I
Sbjct: 318 SDNK-ITEIPETIANLTNLTELYFNYNKITQI 348
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 5 RYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLA-KLKNLEALDLSS 63
RYL+ +S N N+ + L LGL NL +KLD+ G + I L ++ +LE L L
Sbjct: 59 RYLK--KVSGN-NLKTLPLELLGLPNL---RKLDISGNPLERIPDLVTQILHLEELILIR 112
Query: 64 NYYLHGSLEGLANLTNLQVLDLSGNQ-NLTTLGLANLPNLKTLDLRDCGITTI 115
+ E +ANLTNL L L NQ T +A L NL LDL D IT I
Sbjct: 113 -VEITEIPEAIANLTNLTHLILFSNQITETPEAIAKLTNLTQLDLSDNQITEI 164
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 17 NITSGSLTRL--GLANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEG 73
+++S +T++ +ANLTNL +L L+ IT I + +AKL NL L L N E
Sbjct: 362 HLSSNQITQIPEAIANLTNLTELYLNYNKITQIAEAIAKLTNLTELHLDGNQITQIP-EA 420
Query: 74 LANLTNLQVLDLSGN 88
L +L L+ LDL GN
Sbjct: 421 LESLPKLEKLDLRGN 435
>gi|315053229|ref|XP_003175988.1| hypothetical protein MGYG_00080 [Arthroderma gypseum CBS 118893]
gi|311337834|gb|EFQ97036.1| hypothetical protein MGYG_00080 [Arthroderma gypseum CBS 118893]
Length = 1727
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 7/113 (6%)
Query: 10 LDLSANYNITSGSLTRLGL--ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYL 67
LD +++ LT + A+LT L KLDL G I TIQ + L +E +DL N
Sbjct: 1268 LDGLLKLKVSNNQLTSVDFKHADLTRLSKLDLSGNDIHTIQNIDVLHGIETIDLRKNQMQ 1327
Query: 68 HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCG-ITTIQGIQ 119
++ +L L +L LSGNQ L+ L L++ P+L+ L + DC ++TI+ ++
Sbjct: 1328 EFAVR--RSLRRLDILKLSGNQ-LSHLDLSSFPSLRVLYV-DCNHLSTIEKLE 1376
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 8/112 (7%)
Query: 9 VLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH 68
V L + +N SG LT G +L+NL+ LD+ G G+ + GL+KL +L +L+ S N
Sbjct: 1205 VRSLDSPHNCLSG-LTSWG--HLSNLQYLDISGNGLDNLDGLSKLYHLRSLNASHNKLT- 1260
Query: 69 GSLEGLANLTNLQVLDLSGNQNLTTLGL--ANLPNLKTLDLRDCGITTIQGI 118
++G+ L L L +S NQ LT++ A+L L LDL I TIQ I
Sbjct: 1261 -CIKGIFGLDGLLKLKVSNNQ-LTSVDFKHADLTRLSKLDLSGNDIHTIQNI 1310
>gi|18307530|emb|CAD21464.1| ESAG8 [Trypanosoma brucei]
Length = 583
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 73/131 (55%), Gaps = 14/131 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L NL L+VL +S N + GL L NL+KL+L GC G++++ +A L NL+ L
Sbjct: 320 LKNLINLKVLSVSNCKNFKDLN----GLERLVNLEKLNLSGCHGVSSLAFVANLSNLKEL 375
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-------G 111
++S L +GL +L L+VL L ++ T +G + NL ++ LDL C G
Sbjct: 376 NISGCESLV-CFDGLQDLNKLEVLYLRDVKSFTNVGAIKNLSKMRELDLSGCERITSLSG 434
Query: 112 ITTIQGIQQFT 122
+ T++G+++ +
Sbjct: 435 LETLKGLEELS 445
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 7/113 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L L L+ L+LS + ++S + +ANL+NLK+L++ GC + GL L LE L
Sbjct: 343 LERLVNLEKLNLSGCHGVSSLAF----VANLSNLKELNISGCESLVCFDGLQDLNKLEVL 398
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCG 111
L + ++ + NL+ ++ LDLSG + +T+L GL L L+ L L CG
Sbjct: 399 YL-RDVKSFTNVGAIKNLSKMRELDLSGCERITSLSGLETLKGLEELSLEGCG 450
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 23/133 (17%)
Query: 1 LANLRYLQVLDLSANYNITSG--------SLTRLGLA--NLTN-----------LKKLDL 39
L L+ L+ L L NIT G LT L L N+T+ LK LD+
Sbjct: 202 LCRLKTLEALSLDNCINITKGFDKICALPQLTSLSLCQTNVTDKDLRCIHPDGKLKVLDI 261
Query: 40 DGCG-ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL-TTLGLA 97
C IT + +A +++LE L LS + + LE L +NL+ LD+SG L + + L
Sbjct: 262 SSCHEITDLTAIAGVRSLEKLSLSGCWNVTKGLEELCKFSNLRELDISGCLVLGSAVVLK 321
Query: 98 NLPNLKTLDLRDC 110
NL NLK L + +C
Sbjct: 322 NLINLKVLSVSNC 334
>gi|426224243|ref|XP_004006283.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 1
[Ovis aries]
Length = 1668
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+N + L+ +D N+ + + NL NL + L+ +T++ GL N+++L+
Sbjct: 837 LSNCKKLKYIDAQENH------IETINCENLENLCIVLLNKNQLTSLHGLDGCTNIQSLE 890
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
LS N + GL +L NLQ L + NQ ++T GL + P L LD +T ++GI+
Sbjct: 891 LSYNKITR--IGGLESLKNLQQLIVDHNQLISTTGLCDTPTLIYLDCSHNHLTEVEGIE 947
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA NL+ L L CG+T++ GL+ K L+ +D N H NL NL ++ L+
Sbjct: 815 LAECPNLQFLSLRRCGLTSLHGLSNCKKLKYIDAQEN---HIETINCENLENLCIVLLNK 871
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
NQ + GL N+++L+L IT I G++
Sbjct: 872 NQLTSLHGLDGCTNIQSLELSYNKITRIGGLESL 905
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 41/119 (34%), Positives = 60/119 (50%), Gaps = 12/119 (10%)
Query: 7 LQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY 65
+Q L+LS N +TR+G L +L NL++L +D + + GL L LD S N+
Sbjct: 886 IQSLELSYN------KITRIGGLESLKNLQQLIVDHNQLISTTGLCDTPTLIYLDCSHNH 939
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
+EG+ N LQ+L L GN L N L+ L L D I+T ++ F+SY
Sbjct: 940 LTE--VEGIENCGLLQILKLQGNYLSQLPFLGNHVLLRELHLDDNSIST---VETFSSY 993
>gi|378551352|ref|ZP_09826568.1| hypothetical protein CCH26_14734 [Citricoccus sp. CH26A]
Length = 547
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 45/121 (37%), Positives = 65/121 (53%), Gaps = 11/121 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LA L L+ L L N +IT S L+NLTNL +L L G I + LAK ++L L+
Sbjct: 129 LAGLARLEWLHLGFN-DITEIS----ALSNLTNLTELTLSGNLIEDVAPLAKAESLRRLN 183
Query: 61 LSSNYYL-----HGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITT 114
L + + SL GL LT ++ L LS ++ L + +A L NL+TLD+ D G+
Sbjct: 184 LGGAHAVVKGQNAPSLTGLEQLTQVEFLSLSVDRELEDISAVAALSNLRTLDISDTGVLD 243
Query: 115 I 115
+
Sbjct: 244 V 244
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-------GITTIQGLAKL 53
L+NL L L LS N L A +L++L+L G ++ GL +L
Sbjct: 151 LSNLTNLTELTLSGNLIEDVAPL-----AKAESLRRLNLGGAHAVVKGQNAPSLTGLEQL 205
Query: 54 KNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
+E L LS + L + +A L+NL+ LD+S L LA L NL L IT
Sbjct: 206 TQVEFLSLSVDRELE-DISAVAALSNLRTLDISDTGVLDVTPLAGLVNLDVLTATRAAIT 264
Query: 114 TIQGIQ 119
+Q
Sbjct: 265 DASALQ 270
>gi|189094786|emb|CAQ57472.1| expression site-associated gene 8 (ESAG8) protein [Trypanosoma
brucei brucei]
gi|189094795|emb|CAQ57484.1| expression site-associated gene 8 (ESAG8) protein [Trypanosoma
brucei brucei]
Length = 630
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 73/131 (55%), Gaps = 14/131 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L NL L+VL +S N + GL L NL+KL+L GC G++++ +A L NL+ L
Sbjct: 320 LKNLINLKVLSVSNCKNFKDLN----GLERLVNLEKLNLSGCHGVSSLAFVANLSNLKEL 375
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-------G 111
++S L +GL +L L+VL L ++ T +G + NL ++ LDL C G
Sbjct: 376 NISGCESLV-CFDGLQDLNKLEVLYLRDVKSFTNVGAIKNLSKMRELDLSGCERITSLSG 434
Query: 112 ITTIQGIQQFT 122
+ T++G+++ +
Sbjct: 435 LETLKGLEELS 445
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 7/113 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L L L+ L+LS + ++S + +ANL+NLK+L++ GC + GL L LE L
Sbjct: 343 LERLVNLEKLNLSGCHGVSSLAF----VANLSNLKELNISGCESLVCFDGLQDLNKLEVL 398
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCG 111
L + ++ + NL+ ++ LDLSG + +T+L GL L L+ L L CG
Sbjct: 399 YL-RDVKSFTNVGAIKNLSKMRELDLSGCERITSLSGLETLKGLEELSLEGCG 450
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 23/133 (17%)
Query: 1 LANLRYLQVLDLSANYNITSG--------SLTRLGLA--NLTN-----------LKKLDL 39
L L+ L+ L L NIT G LT L L N+T+ LK LD+
Sbjct: 202 LCRLKTLEALSLDNCINITKGFDKICALPQLTSLSLCQTNVTDKDLRCIHPDGKLKVLDI 261
Query: 40 DGCG-ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL-TTLGLA 97
C IT + +A +++LE L LS + + LE L +NL+ LD+SG L + + L
Sbjct: 262 SSCHEITDLTAIAGVRSLEKLSLSGCWNVTKGLEELCKFSNLRELDISGCLVLGSAVVLK 321
Query: 98 NLPNLKTLDLRDC 110
NL NLK L + +C
Sbjct: 322 NLINLKVLSVSNC 334
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
+ NLR + VL+LS N+ S GL LT L++L L GC ITTI + L+NL+ L
Sbjct: 504 IWNLRNVCVLELSCCENLDDLS----GLQCLTGLEELYLIGCEEITTIGVVGNLRNLKCL 559
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT---LGLANLPNLK 103
L L GL L NL+ LDLSG L++ + L +LP L+
Sbjct: 560 STCWCANLK-ELGGLERLVNLEKLDLSGCCGLSSSVFMELMSLPKLQ 605
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 60/135 (44%), Gaps = 30/135 (22%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
+ +L +L+VL +S N+ S GL LT L++L L GC T + L+N+ L
Sbjct: 458 IWSLHHLRVLYVSECGNLEDLS----GLQCLTGLEELYLHGCRKCTNFGPIWNLRNVCVL 513
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG------------------------ 95
+LS L L GL LT L+ L L G + +TT+G
Sbjct: 514 ELSCCENLD-DLSGLQCLTGLEELYLIGCEEITTIGVVGNLRNLKCLSTCWCANLKELGG 572
Query: 96 LANLPNLKTLDLRDC 110
L L NL+ LDL C
Sbjct: 573 LERLVNLEKLDLSGC 587
>gi|395820362|ref|XP_003783537.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 1
[Otolemur garnettii]
Length = 1653
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+N + L+ +D N+ + + NL NL+ + L+ +T++ GL N++ ++
Sbjct: 836 LSNCKKLKYIDAQENH------IETINCENLENLRVVLLNKNQLTSLHGLDGCINIQNIE 889
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
LS N L GL +L NLQ L + NQ ++T GL + P + LD +T I+GI+
Sbjct: 890 LSHNKITR--LGGLESLKNLQQLIVDHNQLISTKGLCDTPTIIYLDCSHNHLTEIEGIE 946
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 15 NYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEG 73
N ++ +TRLG L +L NL++L +D + + +GL + LD S N+ +EG
Sbjct: 887 NIELSHNKITRLGGLESLKNLQQLIVDHNQLISTKGLCDTPTIIYLDCSHNHLTE--IEG 944
Query: 74 LANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
+ N LQ+L L GN L N L+ L L D I+T++ F+SY
Sbjct: 945 IENCGLLQILKLQGNYLSELPLLKNHVLLRELYLDDNSISTVEA---FSSY 992
>gi|297745031|emb|CBI38623.3| unnamed protein product [Vitis vinifera]
Length = 869
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 16/126 (12%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDG---CGITTIQGLAKLKNLEALDLSS 63
L+VLDLS N +GS+ + NLT+L+ L L G ++G KLKNL+ LDLS
Sbjct: 192 LEVLDLSNNR--FTGSIPPY-IWNLTSLQALSLADNQLTGPLPVEGFCKLKNLQELDLSG 248
Query: 64 NYYLHGSLEG-----LANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
N SL+G L+N+ +L++LDLS NQ + + + NL +L+ D G ++G
Sbjct: 249 N-----SLDGMFPPCLSNMRSLKLLDLSLNQFTGKIPSSLISNLTSLEYLDLGSNRLEGR 303
Query: 119 QQFTSY 124
F+++
Sbjct: 304 LSFSAF 309
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L L+ L++L++ NY N S+ L + L++ L+G + + NLE
Sbjct: 139 LKGLKKLEMLNIGQNYFNNSIFPSVGALTSLRVLILRETKLEGSYLDRV----PFNNLEV 194
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ---NLTTLGLANLPNLKTLDL 107
LDLS+N + + NLT+LQ L L+ NQ L G L NL+ LDL
Sbjct: 195 LDLSNNRFTGSIPPYIWNLTSLQALSLADNQLTGPLPVEGFCKLKNLQELDL 246
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI--QGLAKLKNLEA 58
+ NL LQ L L+ N +G L G L NL++LDL G + + L+ +++L+
Sbjct: 210 IWNLTSLQALSLADNQ--LTGPLPVEGFCKLKNLQELDLSGNSLDGMFPPCLSNMRSLKL 267
Query: 59 LDLSSNYY---LHGSLEGLANLTNLQVLDLSGNQ---NLTTLGLANLPNLKT--LDLRDC 110
LDLS N + + SL ++NLT+L+ LDL N+ L+ +N NL+ L L C
Sbjct: 268 LDLSLNQFTGKIPSSL--ISNLTSLEYLDLGSNRLEGRLSFSAFSNHSNLEVIILSLAYC 325
Query: 111 GITTIQGI 118
+ GI
Sbjct: 326 NLNKQTGI 333
>gi|12321378|gb|AAG50756.1|AC079131_1 hypothetical protein [Arabidopsis thaliana]
Length = 1784
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDG---CGITTIQGLAKLKNLE 57
L +L L++LDLS N + +G + GLA L L LDL G +GL +LKNL+
Sbjct: 172 LKDLSNLELLDLSGN--LLNGPVP--GLAVLHKLHALDLSDNTFSGSLGREGLCQLKNLQ 227
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRD 109
LDLS N + + ++LT LQVLD+S NQ TL ++NL +L+ L L D
Sbjct: 228 ELDLSQNEFTGPFPQCFSSLTQLQVLDMSSNQFNGTLPSVISNLDSLEYLSLSD 281
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQGLAKLKNLEAL 59
L NLR L++LDLS N + G + LAN NL+ LD+ + + +GL +LKNL L
Sbjct: 1027 LINLRNLELLDLSKNQFV--GPVP--DLANFHNLQGLDMSDNKFSGSNKGLCQLKNLREL 1082
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
DLS N + + +LT LQVLD+S N
Sbjct: 1083 DLSQNKFTGQFPQCFDSLTQLQVLDISSN 1111
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNLEA 58
LA L L LDLS N SGSL R GL L NL++LDL T Q + L L+
Sbjct: 195 LAVLHKLHALDLSDN--TFSGSLGREGLCQLKNLQELDLSQNEFTGPFPQCFSSLTQLQV 252
Query: 59 LDLSSNYYLHGSLEG-LANLTNLQVLDLSGNQNLTTLG---LANLPNLKTLDL 107
LD+SSN + +G+L ++NL +L+ L LS N+ +ANL LK L
Sbjct: 253 LDMSSNQF-NGTLPSVISNLDSLEYLSLSDNKFEGFFSFDLIANLSKLKVFKL 304
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 61/129 (47%), Gaps = 28/129 (21%)
Query: 9 VLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT--IQGLAKLKNLEALDLSSN-- 64
+L+L A NI+ N ++ K + C +T+ + +LKNLE LD+S N
Sbjct: 935 LLELKAYLNISEYPYDWPNDTNNSDCCKWERVKCDLTSGRYKSFERLKNLEILDISENGV 994
Query: 65 ----------------YYLHG-SLEG------LANLTNLQVLDLSGNQNLTTLG-LANLP 100
LHG ++EG L NL NL++LDLS NQ + + LAN
Sbjct: 995 NNTVLPFINTASSLKTLILHGNNMEGTFPMKELINLRNLELLDLSKNQFVGPVPDLANFH 1054
Query: 101 NLKTLDLRD 109
NL+ LD+ D
Sbjct: 1055 NLQGLDMSD 1063
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 64/151 (42%), Gaps = 35/151 (23%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNLEA 58
LAN LQ LD+S N SGS GL L NL++LDL T Q L L+
Sbjct: 1050 LANFHNLQGLDMSDNK--FSGS--NKGLCQLKNLRELDLSQNKFTGQFPQCFDSLTQLQV 1105
Query: 59 LDLSSNYY-----------------------LHG--SLEGLANLTNLQVLDLSGNQNLTT 93
LD+SSN + G SLE +ANL+ L+V LS NL
Sbjct: 1106 LDISSNNFNGTVPSLIRNLDSVEYLALSDNEFKGFFSLELIANLSKLKVFKLSSRSNLLR 1165
Query: 94 LGLANL--PN--LKTLDLRDCGITTIQGIQQ 120
L + P L ++L++C + + Q
Sbjct: 1166 LKKLSSLQPKFQLSVIELQNCNLENVPSFIQ 1196
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 44/92 (47%), Gaps = 26/92 (28%)
Query: 44 ITTIQGLAKLKNLEALDLSSNYY------------------LHG-SLEG------LANLT 78
I + L KLK LE LD+ +N LHG ++EG L +L+
Sbjct: 117 IHGYKSLGKLKKLEILDMGNNEVNNSVLPFLNAASSLRTLILHGNNMEGTFPMKELKDLS 176
Query: 79 NLQVLDLSGN-QNLTTLGLANLPNLKTLDLRD 109
NL++LDLSGN N GLA L L LDL D
Sbjct: 177 NLELLDLSGNLLNGPVPGLAVLHKLHALDLSD 208
>gi|46447552|ref|YP_008917.1| hypothetical protein pc1918 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401193|emb|CAF24642.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 552
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LA L LQ L+L+ Y +T L L +LT L+ LDL C GL LK L AL
Sbjct: 239 LAPLTALQHLNLNGCYKLTDAGLVHLK--SLTALQTLDLSYCKNLKDAGLVHLKPLTALQ 296
Query: 61 ----LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
S L L +LT LQ LDLS +N GLA+LP L+TLDL C
Sbjct: 297 NLALTSCKNLTDRGLSHLKSLTALQTLDLSYCKNFKDAGLAHLPPLTALQTLDLSYCKDL 356
Query: 114 TIQGIQQFTS 123
T +G+ S
Sbjct: 357 TDRGLSHLKS 366
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L +L LQ LDLS N+ L L LT L+ L L C T +GL+ LK+L AL
Sbjct: 264 LKSLTALQTLDLSYCKNLKDAGLVHLK--PLTALQNLALTSCKNLTDRGLSHLKSLTALQ 321
Query: 60 --DLS-SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDC 110
DLS + L L LT LQ LDLS ++LT GL++L + L+TL+L C
Sbjct: 322 TLDLSYCKNFKDAGLAHLPPLTALQTLDLSYCKDLTDRGLSHLKSLTALQTLNLSYC 378
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA---LDLSS 63
++ L+ S N ++T L L L N NLK L L+ C T GLA L L A L+L+
Sbjct: 195 IEALNFSNNAHLTDAHL--LTLKNCENLKVLHLEACQAITDDGLAHLAPLTALQHLNLNG 252
Query: 64 NYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQGIQ 119
Y L L L +LT LQ LDLS +NL GL +L L+ L L C T +G+
Sbjct: 253 CYKLTDAGLVHLKSLTALQTLDLSYCKNLKDAGLVHLKPLTALQNLALTSCKNLTDRGLS 312
Query: 120 QFTS 123
S
Sbjct: 313 HLKS 316
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 57/117 (48%), Gaps = 9/117 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L LQ LDLS ++T L+ L +LT L+ L+L C GLA LK L AL
Sbjct: 339 LPPLTALQTLDLSYCKDLTDRGLSHLK--SLTALQTLNLSYCKKLKDAGLAHLKPLTALQ 396
Query: 61 L----SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDC 110
S L L +L LQ L LSG NLT GLA+L L+TL LR C
Sbjct: 397 YLALNSCKNLTDRGLSHLKSLMALQHLVLSGCDNLTDAGLAHLKPLTALQTLGLRRC 453
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L LQ L L++ N+T L+ L +L L+ L L GC T GLA LK L AL
Sbjct: 389 LKPLTALQYLALNSCKNLTDRGLSHLK--SLMALQHLVLSGCDNLTDAGLAHLKPLTALQ 446
Query: 61 ---LSSNYYLHGS-LEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
L L G L LA LT LQ LDLS + L GLA+L L+TL L+ C
Sbjct: 447 TLGLRRCQNLTGDGLAHLAPLTALQTLDLSYCKKLKDAGLAHLKPLTALQTLGLKWCSNL 506
Query: 114 TIQGIQQF 121
T G+
Sbjct: 507 TDAGLAHL 514
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 59/128 (46%), Gaps = 9/128 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L +L LQ L LS N+T L L LT L+ L L C T GLA L L AL
Sbjct: 414 LKSLMALQHLVLSGCDNLTDAGLAHLK--PLTALQTLGLRRCQNLTGDGLAHLAPLTALQ 471
Query: 60 --DLSSNYYLHGS-LEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
DLS L + L L LT LQ L L NLT GLA+L L+ LDL C
Sbjct: 472 TLDLSYCKKLKDAGLAHLKPLTALQTLGLKWCSNLTDAGLAHLKPLAALQHLDLSYCNNL 531
Query: 114 TIQGIQQF 121
T G+ F
Sbjct: 532 TRAGLANF 539
>gi|148379919|ref|YP_001254460.1| leucine-rich repeat-containing protein [Clostridium botulinum A
str. ATCC 3502]
gi|153931951|ref|YP_001384216.1| internalin [Clostridium botulinum A str. ATCC 19397]
gi|153935410|ref|YP_001387757.1| internalin [Clostridium botulinum A str. Hall]
gi|148289403|emb|CAL83499.1| probable leucine-rich repeat surface protein [Clostridium botulinum
A str. ATCC 3502]
gi|152927995|gb|ABS33495.1| leucine-rich repeat protein [Clostridium botulinum A str. ATCC
19397]
gi|152931324|gb|ABS36823.1| leucine-rich repeat protein [Clostridium botulinum A str. Hall]
Length = 332
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
++ L NL+ L++ C + + + LKNL+ LD+S+N +L GL NLTNL+ L +S
Sbjct: 142 ISTLKNLENLEIIDCKLNDVSIVKNLKNLKRLDISNNEI--NNLNGLENLTNLKELYMSN 199
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N + NL NL LD+ D IT+I+ ++ S
Sbjct: 200 NNIADLKPIHNLLNLTNLDISDNKITSIKELKNMKS 235
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 10/122 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL L+++D N S+ + NL NLK+LD+ I + GL L NL+ L
Sbjct: 145 LKNLENLEIIDCKLN----DVSIVK----NLKNLKRLDISNNEINNLNGLENLTNLKELY 196
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+S+N L+ + NL NL LD+S N+ + L N+ ++K L++ + ++ ++GI+
Sbjct: 197 MSNNNI--ADLKPIHNLLNLTNLDISDNKITSIKELKNMKSIKELNICNNNLSNLEGIEN 254
Query: 121 FT 122
+
Sbjct: 255 MS 256
>gi|226949256|ref|YP_002804347.1| putative internalin [Clostridium botulinum A2 str. Kyoto]
gi|226843122|gb|ACO85788.1| putative internalin [Clostridium botulinum A2 str. Kyoto]
Length = 332
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
++ L NL+ L++ C + + + LKNL+ LD+S+N +L GL NLTNL+ L +S
Sbjct: 142 ISTLKNLENLEIIDCKLNDVSIVKNLKNLKRLDISNNEI--NNLNGLENLTNLKELYMSN 199
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N + NL NL LD+ D IT+I+ ++ S
Sbjct: 200 NNIADLKPIHNLLNLTNLDISDNKITSIKELKNMKS 235
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 10/122 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL L+++D N S+ + NL NLK+LD+ I + GL L NL+ L
Sbjct: 145 LKNLENLEIIDCKLN----DVSIVK----NLKNLKRLDISNNEINNLNGLENLTNLKELY 196
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+S+N L+ + NL NL LD+S N+ + L N+ ++K L++ + ++ ++GI+
Sbjct: 197 MSNNNI--ADLKPIHNLLNLTNLDISDNKITSIKELKNMKSIKELNICNNNLSNLEGIEN 254
Query: 121 FT 122
+
Sbjct: 255 MS 256
>gi|388258745|ref|ZP_10135920.1| hypothetical protein O59_003141 [Cellvibrio sp. BR]
gi|387937504|gb|EIK44060.1| hypothetical protein O59_003141 [Cellvibrio sp. BR]
Length = 272
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G+ L L +DL I I LA+L+ LE LDLS+N SLE LA L NL+ + LS
Sbjct: 117 GIEALKQLSSIDLRDNAIVNINVLAQLRELENLDLSNNAV--TSLEALATLPNLKEIRLS 174
Query: 87 GNQNLTTLGLANLPNLKTLDLRD 109
GNQ + L ++ LK +D+ D
Sbjct: 175 GNQPNSIKPLLSIATLKAVDMPD 197
>gi|297821945|ref|XP_002878855.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324694|gb|EFH55114.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 910
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+ LR LQ++DLS NY S +LT + + G I+GL L NLE LD
Sbjct: 120 LSRLRNLQIMDLSTNYFNYSIFPFLNAATSLTTIFLTYNEMDGPFPIKGLKDLTNLELLD 179
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ---NLTTLGLANLPNLKTLDLR 108
L +N L GS++ L NL NL+VL L+ N + N+ NL+ LDLR
Sbjct: 180 LRAN-KLKGSMQELKNLINLEVLGLAQNHVDGPIPIEVFCNIKNLRELDLR 229
>gi|424713203|ref|YP_007013918.1| Internalin-I [Listeria monocytogenes serotype 4b str. LL195]
gi|424012387|emb|CCO62927.1| Internalin-I [Listeria monocytogenes serotype 4b str. LL195]
Length = 1631
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ L LS N ++T+ + + ++ LK L LDGCGIT+I L L LE LD
Sbjct: 238 LNNLPKLQTLILSDNKDLTNIN----AITDMPQLKTLALDGCGITSIGTLDNLPKLEKLD 293
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
L N S+ + +L L LD+S N LTT+G L LP L+ L++ ++ + +
Sbjct: 294 LKENQLT--SISEINDLPRLSYLDVSVNY-LTTIGELKKLPLLEWLNVSSNRLSDVSTLT 350
Query: 120 QFTS 123
F S
Sbjct: 351 NFPS 354
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
++ LR L++ + NY T G+L+ L++LTNL +L+L G I+ I GL+ L L L
Sbjct: 508 VSKLRNLELQNNYLNYTGTEGNLS--ALSDLTNLTELNLRDNGYISDISGLSTLSRLIYL 565
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+L SN + L+NLT LQ L L NQ L++L NL L L I I
Sbjct: 566 NLDSNKI--KDISALSNLTTLQELTLENNQIEDISALSDLDNLNKLALSKNKIIDI 619
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 12/106 (11%)
Query: 23 LTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY-YLH--GSLEGLANLT 78
+T +G + NL L +DL I ++ + L LE L ++ NY YL G+++G++ L
Sbjct: 453 ITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTMDGVSKLR 512
Query: 79 NLQV----LDLSGNQ-NLTTLGLANLPNLKTLDLRDCG-ITTIQGI 118
NL++ L+ +G + NL+ L++L NL L+LRD G I+ I G+
Sbjct: 513 NLELQNNYLNYTGTEGNLS--ALSDLTNLTELNLRDNGYISDISGL 556
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 22/99 (22%)
Query: 40 DGCGITTIQGLAKLKNLEALDLSSNYYLH---------------------GSLEGLANLT 78
D I+ I+GL L+NL +L+LS N +L G+ L
Sbjct: 21 DPTDISNIEGLQYLENLTSLNLSENNISDLAPIKDLVNLVSLNLSSNRTLVNLSGVEGLV 80
Query: 79 NLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQ 116
NLQ L++S N+ L + +A LP LK + + C I T++
Sbjct: 81 NLQELNVSANKALEDISQVAALPVLKEISAQGCNIKTLE 119
>gi|307168558|gb|EFN61616.1| Protein phosphatase 1 regulatory subunit 7 [Camponotus floridanus]
Length = 327
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
LT L +L+L I I+ L L NLE LDLS N +EGL+NL NLQ L LS N+
Sbjct: 78 LTTLVELELRDNQIINIENLDALVNLELLDLSFNRI--KKIEGLSNLLNLQKLFLSSNKI 135
Query: 91 LTTLGLANLPNLKTLDLRDCGITTI---QGIQQFTS 123
L +++L NL TL+L D I I +G+Q+ T+
Sbjct: 136 LHIENVSHLTNLTTLELGDNKIREIENLEGLQKLTN 171
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 69/134 (51%), Gaps = 27/134 (20%)
Query: 7 LQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY 65
L++LDLS N + ++ GL+NL NL+KL L I I+ ++ L NL L+L N
Sbjct: 103 LELLDLSFN------RIKKIEGLSNLLNLQKLFLSSNKILHIENVSHLTNLTTLELGDNK 156
Query: 66 YLH-GSLEGLANLTNL--------QVLDLSGNQNLTTLGL--------ANLPNLKTLD-- 106
+LEGL LTNL ++ +L +NLT L L N+ LK LD
Sbjct: 157 IREIENLEGLQKLTNLYLGKNKITKIQNLESLENLTLLSLQSNRITKIENIEELKKLDQL 216
Query: 107 -LRDCGITTIQGIQ 119
L + GIT I+GI+
Sbjct: 217 YLSENGITCIEGIE 230
>gi|220932817|ref|YP_002509725.1| hypothetical protein Hore_19830 [Halothermothrix orenii H 168]
gi|219994127|gb|ACL70730.1| leucine-rich repeat protein [Halothermothrix orenii H 168]
Length = 531
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 66/120 (55%), Gaps = 11/120 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L L+ LDLS N +I + S+ ++ L LK LDL+GCG+T I+ L L +LE L+
Sbjct: 364 LEGLNTLERLDLSGN-SIENVSV----ISGLNKLKYLDLEGCGLTAIEFLKDLGSLEYLE 418
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L +N +E L NL+ L L NQ +++TLG L NLK L L D I I +
Sbjct: 419 LENNRI--SQIEPLKKHINLKTLVLDNNQIKDISTLG--ELMNLKVLSLNDNQIENIDSL 474
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
++NL L L N+ S++ L L LT L LDL+ I I L LK L L
Sbjct: 182 ISNLETLTQLPNLKTLNVAYNSISDLKPLTALTGLSHLDLEANNIKDISPLRGLKKLTYL 241
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
+L N L G ++ L++L LQVL LSGN L L NL+ LD+ D I+ G++
Sbjct: 242 NLIRNE-LTG-VKHLSSLEGLQVLLLSGNDLRNIASLTRLVNLEKLDISDNNISVAPGLK 299
Query: 120 QF 121
+F
Sbjct: 300 EF 301
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 68/165 (41%), Gaps = 47/165 (28%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L++L LQVL LS N SLTRL NL+KLD+ I+ GL + K L+ L+
Sbjct: 254 LSSLEGLQVLLLSGNDLRNIASLTRL-----VNLEKLDISDNNISVAPGLKEFKGLKELN 308
Query: 61 LSSNY--------------------------------------YLHGS----LEGLANLT 78
+S N +LH + + L L
Sbjct: 309 ISGNPIDDINFISECRKLERLLAFNCEIRDISPLRGHNSLKELFLHNNRITDISPLEGLN 368
Query: 79 NLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
L+ LDLSGN ++ L LK LDL CG+T I+ ++ S
Sbjct: 369 TLERLDLSGNSIENVSVISGLNKLKYLDLEGCGLTAIEFLKDLGS 413
>gi|46447548|ref|YP_008913.1| hypothetical protein pc1914 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401189|emb|CAF24638.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 528
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA---LDLSSN 64
Q LDLS YN+T SL+ L LT L+ L L GC T GLA L L A LDLS
Sbjct: 347 QHLDLSCCYNLTDASLSH--LTPLTALQHLYLIGCENLTDAGLAHLTPLTALQHLDLSCC 404
Query: 65 YYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQGIQQ 120
+ L L L LT LQ L+LS LT GLA+L L+ L+L +C T G+
Sbjct: 405 FNLTDAGLSHLTPLTGLQHLNLSRCYKLTDAGLAHLTTLVALQHLNLSECRHLTDAGLAH 464
Query: 121 FTS 123
T
Sbjct: 465 LTP 467
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L L LQ LDLS +N+T L+ L LT L+ L+L C T GLA L L AL
Sbjct: 390 LTPLTALQHLDLSCCFNLTDAGLSHL--TPLTGLQHLNLSRCYKLTDAGLAHLTTLVALQ 447
Query: 60 --DLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
+LS +L L L LT LQ LDL NLT GLA+L L+ LDL C
Sbjct: 448 HLNLSECRHLTDAGLAHLTPLTALQHLDLKYCINLTDAGLAHLTPLTALQHLDLSRCRRL 507
Query: 114 TIQGIQQFTS 123
T G+ +F +
Sbjct: 508 TDDGLDRFKT 517
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 62/126 (49%), Gaps = 9/126 (7%)
Query: 5 RYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLA---KLKNLEALDL 61
+ ++VL+ S N ++T+ L L L + N++ L C T GLA LK L+ LDL
Sbjct: 194 KKIEVLNFSENTHLTNAHL--LALKDCKNIEVLYFKKCRGVTDAGLAHLVPLKGLQHLDL 251
Query: 62 SSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQG 117
S L L L LT LQ L+LSG NLT GL +L L+ LDL C T G
Sbjct: 252 SYCENLTDAGLAYLKPLTALQHLNLSGCWNLTDAGLVHLTPLVGLQHLDLSYCENLTDAG 311
Query: 118 IQQFTS 123
+ T
Sbjct: 312 LAHLTP 317
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 63/155 (40%), Gaps = 34/155 (21%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L L LQ L+LS +N+T L L L L+ LDL C T GLA L L AL
Sbjct: 265 LKPLTALQHLNLSGCWNLTDAGLVHL--TPLVGLQHLDLSYCENLTDAGLAHLTPLTALQ 322
Query: 60 ---------------------------DLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNL 91
DLS Y L SL L LT LQ L L G +NL
Sbjct: 323 HLGLSCCENLTDAGLAHLALLTTLQHLDLSCCYNLTDASLSHLTPLTALQHLYLIGCENL 382
Query: 92 TTLGLANLPN---LKTLDLRDCGITTIQGIQQFTS 123
T GLA+L L+ LDL C T G+ T
Sbjct: 383 TDAGLAHLTPLTALQHLDLSCCFNLTDAGLSHLTP 417
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKN---LE 57
L L+ LQ LDLS N+T L L LT L+ L+L GC T GL L L+
Sbjct: 240 LVPLKGLQHLDLSYCENLTDAGLAY--LKPLTALQHLNLSGCWNLTDAGLVHLTPLVGLQ 297
Query: 58 ALDLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLG 95
LDLS L L L LT LQ L LS +NLT G
Sbjct: 298 HLDLSYCENLTDAGLAHLTPLTALQHLGLSCCENLTDAG 336
>gi|194761306|ref|XP_001962870.1| GF15653 [Drosophila ananassae]
gi|190616567|gb|EDV32091.1| GF15653 [Drosophila ananassae]
Length = 881
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSNY 65
QVLD+S N + + S + ANL NL+KL L C I I+G L NL LDLS N
Sbjct: 128 QVLDMSGN-KLQTLSNEQFIRANLLNLQKLYLRNCKIGEIEGETFKGLTNLVELDLSHNL 186
Query: 66 YLHGSLEGLANLTNLQVLDLSGN--QNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
+ L ++++L+ L L+ N + AN P+L LDL C I TI Q F+
Sbjct: 187 LVKVPSLALGSISSLRELTLASNHIHKIDAQAFANTPSLHKLDLSHCDIQTIS-PQAFS 244
>gi|293333137|ref|NP_001169648.1| hypothetical protein [Zea mays]
gi|224030627|gb|ACN34389.1| unknown [Zea mays]
gi|414887540|tpg|DAA63554.1| TPA: hypothetical protein ZEAMMB73_588339 [Zea mays]
gi|414887541|tpg|DAA63555.1| TPA: hypothetical protein ZEAMMB73_588339 [Zea mays]
Length = 483
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 55/88 (62%), Gaps = 5/88 (5%)
Query: 33 NLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL--ANLTNLQVLDLSGNQN 90
+L+ L + G G+T+++G +L+NL L LS N + G L+ L A L++L+ LDLS N+
Sbjct: 52 SLEHLSIAGVGVTSLEGFPRLRNLTRLTLSDN-RIAGGLDHLVAAGLSSLRDLDLSNNRI 110
Query: 91 LTTLGLANLPNLK--TLDLRDCGITTIQ 116
LA L +L+ +LDL +C +T ++
Sbjct: 111 QDVDDLAPLADLRLVSLDLYECPVTRVK 138
>gi|357129987|ref|XP_003566640.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At4g08850-like [Brachypodium distachyon]
Length = 769
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 65/111 (58%), Gaps = 6/111 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT---IQGLAKLKNLE 57
+ NL L LDLS N ++ GS+T + L NLKKL L +TT L L +LE
Sbjct: 129 ICNLTKLTSLDLSYNL-LSQGSMT-CTVGTLGNLKKLYLSHNSLTTGLIPSDLVNLASLE 186
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDL 107
+LDLS+N+ + NLT+L+ LDLS NQ + ++G + NL +L+ LDL
Sbjct: 187 SLDLSNNHITGSISRSIGNLTSLEFLDLSNNQIMGSIGSIGNLTSLRYLDL 237
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 7/106 (6%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNLEALDLSSN 64
L+ L LS N ++T+G L L NL +L+ LDL IT + + L +LE LDLS+N
Sbjct: 160 LKKLYLSHN-SLTTG-LIPSDLVNLASLESLDLSNNHITGSISRSIGNLTSLEFLDLSNN 217
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTT--LGLANLPNLKTLDLR 108
+ GS+ + NLT+L+ LDLS NQ + L + L +L+TL L
Sbjct: 218 QIM-GSIGSIGNLTSLRYLDLSNNQIHCSILLTFSKLTSLETLALE 262
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQGLAKLKNLEAL 59
L NL L+ LDLS N+ +GS++R + NLT+L+ LDL I +I + L +L L
Sbjct: 179 LVNLASLESLDLSNNH--ITGSISR-SIGNLTSLEFLDLSNNQIMGSIGSIGNLTSLRYL 235
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
DLS+N L + LT+L+ L L NQ
Sbjct: 236 DLSNNQIHCSILLTFSKLTSLETLALESNQ 265
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNLEALDLSSN 64
L LDLS NY++ +GS+ L L L LDL ++ + L NL LDLS N
Sbjct: 63 LSFLDLSKNYDL-NGSIP--PLTGLPRLAHLDLSSNALSDEIPSSIGALANLSFLDLSRN 119
Query: 65 YYLHGSLEGLANLTNLQVLDLSGN---QNLTTLGLANLPNLKTLDLRDCGITT 114
+ NLT L LDLS N Q T + L NLK L L +TT
Sbjct: 120 TISGSIPPSICNLTKLTSLDLSYNLLSQGSMTCTVGTLGNLKKLYLSHNSLTT 172
>gi|356515236|ref|XP_003526307.1| PREDICTED: uncharacterized protein LOC100778703 [Glycine max]
Length = 679
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 7 LQVLDLSAN--YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN 64
L+VL+L+ N IT+G+L R L L+L I+TI+GL +L L LDLS N
Sbjct: 414 LKVLNLAGNAIVRITAGALPR-------GLHALNLSRNKISTIEGLRELTRLRVLDLSYN 466
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
L GLA+ ++L+ L L+GN+ GL L L LDL I+T + + Q +
Sbjct: 467 RILRIG-HGLASCSSLKELYLAGNKISEVEGLHRLLKLSILDLSFNKISTAKCLGQLAA 524
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L L+VLDLS N + G GLA+ ++LK+L L G I+ ++GL +L L LD
Sbjct: 452 LRELTRLRVLDLSYNRILRIGH----GLASCSSLKELYLAGNKISEVEGLHRLLKLSILD 507
Query: 61 LSSNYYLHGSLEG--LANLTNLQVLDLSGNQNLTTLG 95
LS N G AN LQ ++L GN +G
Sbjct: 508 LSFNKISTAKCLGQLAANYNTLQAINLDGNPAQKNVG 544
>gi|156367388|ref|XP_001627399.1| predicted protein [Nematostella vectensis]
gi|156214308|gb|EDO35299.1| predicted protein [Nematostella vectensis]
Length = 316
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 32 TNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL 91
+NL L+L I+ I+GL L+NL LDLSSN H +EGL +L L+VL+LS N+
Sbjct: 34 SNLVTLNLHSNHISKIEGLQHLQNLRHLDLSSNQISH--IEGLTSLGYLRVLNLSCNRIY 91
Query: 92 TTLGLANLPNLKTLDLRDCGITTIQGIQ 119
GL NL L LDL I + G++
Sbjct: 92 LVEGLENLRKLTKLDLSYNFIENVSGLK 119
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 17 NITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY-YLHGSLEGL 74
N+ S ++++ GL +L NL+ LDL I+ I+GL L L L+LS N YL +EGL
Sbjct: 40 NLHSNHISKIEGLQHLQNLRHLDLSSNQISHIEGLTSLGYLRVLNLSCNRIYL---VEGL 96
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANL 99
NL L LDLS N GL +L
Sbjct: 97 ENLRKLTKLDLSYNFIENVSGLKDL 121
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 32 TNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL 91
T K++ IT+I+ L NL L+L SN+ +EGL +L NL+ LDLS NQ
Sbjct: 12 TRPKEICWIDSQITSIKSLKLHSNLVTLNLHSNHI--SKIEGLQHLQNLRHLDLSSNQIS 69
Query: 92 TTLGLANLPNLKTLDLRDCGITTIQGIQ 119
GL +L L+ L+L I ++G++
Sbjct: 70 HIEGLTSLGYLRVLNLSCNRIYLVEGLE 97
>gi|255523032|ref|ZP_05390004.1| leucine-rich repeat protein [Clostridium carboxidivorans P7]
gi|255513147|gb|EET89415.1| leucine-rich repeat protein [Clostridium carboxidivorans P7]
Length = 676
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 63/131 (48%), Gaps = 18/131 (13%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L NL LQ +DLS N I+ S L NLTNLKKL+L + I L+KL NL+ L
Sbjct: 198 LKNLVKLQSIDLSYN-KISDIS----ALKNLTNLKKLNLGNNKVRDISVLSKLTNLQELN 252
Query: 60 ------------DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL 107
D +NY + L NLTNLQ L+L + L L NLKTLDL
Sbjct: 253 LGYIPYHDFETPDPEANYNEISDISALKNLTNLQTLNLGYTKIKDLNALKGLNNLKTLDL 312
Query: 108 RDCGITTIQGI 118
I+ I I
Sbjct: 313 SGNQISDISSI 323
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G+ NLTNLK+L+L I I L L L+++DLS N + L NLTNL+ L+L
Sbjct: 175 GIENLTNLKQLNLRESEINDISELKNLVKLQSIDLSYNKI--SDISALKNLTNLKKLNLG 232
Query: 87 GNQNLTTLGLANLPNLKTLDL 107
N+ L+ L NL+ L+L
Sbjct: 233 NNKVRDISVLSKLTNLQELNL 253
>gi|301118556|ref|XP_002907006.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108355|gb|EEY66407.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1506
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 53/154 (34%), Positives = 68/154 (44%), Gaps = 41/154 (26%)
Query: 7 LQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA------- 58
+Q L+LS N L L L+ LTNL +LDL G I + GL L NL+
Sbjct: 46 VQALNLSTNTRKPRRPLKSLKALSVLTNLVQLDLSGNAIERLDGLHVLTNLQRLAIPRNH 105
Query: 59 ----------------LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG----LAN 98
LDLS N+ H L G + LT L+VL+LSGN NL TL LA
Sbjct: 106 LKTLSAPLFTLKGLTHLDLSGNFIAHLPL-GFSGLTTLEVLNLSGN-NLGTLREVDVLAP 163
Query: 99 LPNLKTLDL-----------RDCGITTIQGIQQF 121
L NL + L RD I I+ +++
Sbjct: 164 LANLLSCSLAANPFCRLPTYRDYAICKIRSLERL 197
>gi|196007970|ref|XP_002113851.1| hypothetical protein TRIADDRAFT_26327 [Trichoplax adhaerens]
gi|190584255|gb|EDV24325.1| hypothetical protein TRIADDRAFT_26327, partial [Trichoplax
adhaerens]
Length = 279
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NL LK L+L I I+G L+NL +L L N S EG+ L L+ L +
Sbjct: 102 LENLKELKMLELGSNKIRKIEGFQNLQNLTSLYLGRNKI--ASFEGICCLRGLKTLSIQC 159
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ + LGL+ L NL+ L + D GI TI+G++ T
Sbjct: 160 NRIESLLGLSELVNLEELYVSDNGIKTIEGLENLTK 195
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L NL+ L++L+L +N + ++ G NL NL L L I + +G+ L+ L+ L
Sbjct: 102 LENLKELKMLELGSN------KIRKIEGFQNLQNLTSLYLGRNKIASFEGICCLRGLKTL 155
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
+ N SL GL+ L NL+ L +S N T GL NL L LD+ I+ IQ +
Sbjct: 156 SIQCNRI--ESLLGLSELVNLEELYVSDNGIKTIEGLENLTKLTILDVAANRISKIQNLG 213
Query: 120 QFT 122
T
Sbjct: 214 HLT 216
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 26 LGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
LGL+ L NL++L + GI TI+GL L L LD+++N ++ L +LT L+ L +
Sbjct: 166 LGLSELVNLEELYVSDNGIKTIEGLENLTKLTILDVAANRI--SKIQNLGHLTLLEELWM 223
Query: 86 SGNQ 89
+ NQ
Sbjct: 224 NNNQ 227
>gi|293348582|ref|XP_001080693.2| PREDICTED: leucine-rich repeat and IQ domain-containing protein
1-like [Rattus norvegicus]
Length = 1677
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA +NL+ L L CG+T++QGL+ NL+ +D N+ S E NL NL V+ L+
Sbjct: 828 LAECSNLQLLSLQRCGLTSLQGLSHCTNLKYIDAQENHIETISCE---NLENLSVVLLNK 884
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
N + G N++ L+L IT I G++
Sbjct: 885 NLLTSIHGFDGCTNIQILELSYNKITRISGLESL 918
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 9/113 (7%)
Query: 7 LQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY 65
+Q+L+LS N +TR+ GL +L L++L +D + + +GL ++ + LD S N+
Sbjct: 899 IQILELSYN------KITRISGLESLKYLQQLIVDHNQLISTKGLCEVPTIVYLDCSHNH 952
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
++G+ N LQ++ L GN L N L+ L L D I++++G+
Sbjct: 953 LT--DVDGIGNCGLLQIVKLQGNYLREPPSLRNHVLLRELHLDDNSISSVEGL 1003
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LA LQ+L L G + GL++ TNLK +D I TI L+NL +
Sbjct: 828 LAECSNLQLLSLQ-----RCGLTSLQGLSHCTNLKYIDAQENHIETIS-CENLENLSVVL 881
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L+ N L S+ G TN+Q+L+LS N+ GL +L L+ L + + + +G+
Sbjct: 882 LNKN--LLTSIHGFDGCTNIQILELSYNKITRISGLESLKYLQQLIVDHNQLISTKGL 937
>gi|168180355|ref|ZP_02615019.1| putative surface protein [Clostridium botulinum NCTC 2916]
gi|182668743|gb|EDT80721.1| putative surface protein [Clostridium botulinum NCTC 2916]
Length = 1355
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 13/124 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L +LRYL + N N+T G L+ L NLT+L+ LDL GI+ I L KL+NL L
Sbjct: 874 LTSLRYLYL----NNMNLT-GDLS--FLENLTDLRILDLSRTGISNISILDKLRNLSELY 926
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQ 119
L N + L L NLTNL LDL N ++T++ L NL NL+ L L IT + IQ
Sbjct: 927 LGGNNII--DLSSLENLTNLVKLDLVENNDITSIYALRNLINLRYLTL---PITNPKKIQ 981
Query: 120 QFTS 123
+++
Sbjct: 982 DYSA 985
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L ++ L LDLS N NI S + L NLKKL L I +I+ + LK LE
Sbjct: 608 LESMENLTYLDLSNNEISNIDS-------IKKLVNLKKLVLHKNKIGSIKSIESLKYLEE 660
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
LDLS+N L G + L L+ L LDLS N ++ L +L NL+ L L + I+
Sbjct: 661 LDLSNN--LIGDITALGGLSQLTRLDLSRNGIVSINSLGSLINLQYLSLYENKIS 713
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
L+++ KL+L G GI +QGL ++NL LDLS+N +++ + L NL+ L L N+
Sbjct: 589 LSSITKLELSGRGIVDLQGLESMENLTYLDLSNNEI--SNIDSIKKLVNLKKLVLHKNKI 646
Query: 91 LTTLGLANLPNLKTLDLRDC---GITTIQGIQQFT 122
+ + +L L+ LDL + IT + G+ Q T
Sbjct: 647 GSIKSIESLKYLEELDLSNNLIGDITALGGLSQLT 681
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ +L+YL+ LDLS N G +T LG L+ L +LDL GI +I L L NL+ L
Sbjct: 652 IESLKYLEELDLSNN---LIGDITALG--GLSQLTRLDLSRNGIVSINSLGSLINLQYLS 706
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDL--SGNQNLTTLGLANLPNLKTLDL 107
L N G E L L +L+ L L SG N + LA NL+ D
Sbjct: 707 LYENKISEGE-EYLKKLYSLRELYLKNSGVSNF-DVTLAYYNNLEKKDF 753
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
+L N+K+LD I + G+ + LE L+LS SL L L NL+ +++S
Sbjct: 352 TDLENIKELDFHNAHIEKLNGIENMTALEKLNLSGTDIKDISL--LKCLINLKEVNISNT 409
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
L N ++ L+L + +TT+Q I++F
Sbjct: 410 SISDITALKNSIYIRYLNLNETNVTTLQVIEKF 442
>gi|392349359|ref|XP_235088.6| PREDICTED: leucine-rich repeat and IQ domain-containing protein
1-like, partial [Rattus norvegicus]
Length = 1554
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA +NL+ L L CG+T++QGL+ NL+ +D N+ S E NL NL V+ L+
Sbjct: 828 LAECSNLQLLSLQRCGLTSLQGLSHCTNLKYIDAQENHIETISCE---NLENLSVVLLNK 884
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
N + G N++ L+L IT I G++
Sbjct: 885 NLLTSIHGFDGCTNIQILELSYNKITRISGLESL 918
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 9/113 (7%)
Query: 7 LQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY 65
+Q+L+LS N +TR+ GL +L L++L +D + + +GL ++ + LD S N+
Sbjct: 899 IQILELSYN------KITRISGLESLKYLQQLIVDHNQLISTKGLCEVPTIVYLDCSHNH 952
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
++G+ N LQ++ L GN L N L+ L L D I++++G+
Sbjct: 953 LT--DVDGIGNCGLLQIVKLQGNYLREPPSLRNHVLLRELHLDDNSISSVEGL 1003
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LA LQ+L L G + GL++ TNLK +D I TI L+NL +
Sbjct: 828 LAECSNLQLLSLQ-----RCGLTSLQGLSHCTNLKYIDAQENHIETIS-CENLENLSVVL 881
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L+ N L S+ G TN+Q+L+LS N+ GL +L L+ L + + + +G+
Sbjct: 882 LNKN--LLTSIHGFDGCTNIQILELSYNKITRISGLESLKYLQQLIVDHNQLISTKGL 937
>gi|384178504|ref|YP_005564266.1| internalin protein [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324324588|gb|ADY19848.1| internalin protein [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 1295
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 27/137 (19%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
++NLR L+++DLS N I L +L NL+KL++ I + L K++ L+ LD
Sbjct: 601 ISNLRGLKLVDLSNN-QIEDMK----PLQSLENLEKLNVSNNSIKNVPELFKIQKLQNLD 655
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLG--------------------LAN 98
LS+N H +L G+ L NL L ++ N+ NL + LAN
Sbjct: 656 LSNNKLDHAALVGIHQLQNLDTLLVNNNEINNLDEISKVSKLNKLEIMSNKIRDISPLAN 715
Query: 99 LPNLKTLDLRDCGITTI 115
L NL+ L+L D I I
Sbjct: 716 LKNLQWLNLSDNKIKDI 732
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 1 LANLRYLQVLDLSAN--------YNITS--------GSLTRL-GLANLTNLKKLDLDGCG 43
L+ L+ ++ ++LS N YN++S +T L G+ L L L + G
Sbjct: 299 LSQLKKVRTVNLSGNKISDIKPLYNVSSLRKLYVSNNKITDLTGIEQLNKLGTLGIGSNG 358
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
+ I+ ++++ +L LDL N + L+NLT+LQ L+L N L+NL NL
Sbjct: 359 LVNIEPISEMSSLVELDLQKNDI--KDITSLSNLTSLQALNLEENYVSDVSSLSNLNNLY 416
Query: 104 TLDLRDCGITTIQGIQQF 121
L L I I+ IQ+
Sbjct: 417 ELKLATNEIRDIRPIQEL 434
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
+L+ ++ L++ A I S GL + NL++L + G + I +++LK L+ +DLS
Sbjct: 212 DLKEIKELNIYAGQGIESLK----GLEYMENLERLTIQGSDVRNIAPISQLKRLKVVDLS 267
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N ++E L NL L +L+L N+ + L+ L ++T++L I+ I+ + +
Sbjct: 268 FNKI--ENVEPLVNLERLDILELQNNRIVDINPLSQLKKVRTVNLSGNKISDIKPLYNVS 325
Query: 123 S 123
S
Sbjct: 326 S 326
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 19/140 (13%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-----------------LANLTNLKKLDLDGCG 43
L NL L +L+L N + L++L L N+++L+KL +
Sbjct: 277 LVNLERLDILELQNNRIVDINPLSQLKKVRTVNLSGNKISDIKPLYNVSSLRKLYVSNNK 336
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
IT + G+ +L L L + SN + ++E ++ +++L LDL N L+NL +L+
Sbjct: 337 ITDLTGIEQLNKLGTLGIGSNGLV--NIEPISEMSSLVELDLQKNDIKDITSLSNLTSLQ 394
Query: 104 TLDLRDCGITTIQGIQQFTS 123
L+L + ++ + + +
Sbjct: 395 ALNLEENYVSDVSSLSNLNN 414
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 23 LTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQV 82
+T+ L + LK D + GIT GL + N+E L L N + ++E ++NL L++
Sbjct: 552 ITKEDLLKVKTLKITDGEKEGITDFSGLELMTNMEELTLK-NVNMK-NVEFISNLRGLKL 609
Query: 83 LDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+DLS NQ L +L NL+ L++ + I +
Sbjct: 610 VDLSNNQIEDMKPLQSLENLEKLNVSNNSIKNV 642
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TN+++L L + ++ ++ L+ L+ +DLS+N ++ L +L NL+ L++S
Sbjct: 578 GLELMTNMEELTLKNVNMKNVEFISNLRGLKLVDLSNNQI--EDMKPLQSLENLEKLNVS 635
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGI--TTIQGIQQF 121
N L + L+ LDL + + + GI Q
Sbjct: 636 NNSIKNVPELFKIQKLQNLDLSNNKLDHAALVGIHQL 672
>gi|237795193|ref|YP_002862745.1| putative surface protein [Clostridium botulinum Ba4 str. 657]
gi|229260764|gb|ACQ51797.1| putative surface protein [Clostridium botulinum Ba4 str. 657]
Length = 1355
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 13/124 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L +LRYL + N N+T G L+ L NLT+L+ LDL GI+ I L KL+NL L
Sbjct: 874 LTSLRYLYL----NNMNLT-GDLS--FLENLTDLRILDLSRTGISNISILDKLRNLSELY 926
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQ 119
L N + L L NLTNL LDL N ++T++ L NL NL+ L L IT + IQ
Sbjct: 927 LGGNNII--DLSSLENLTNLVKLDLVENNDITSIYALRNLINLRYLTL---PITNPKKIQ 981
Query: 120 QFTS 123
+++
Sbjct: 982 DYSA 985
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L ++ L LDLS N NI S + L NLKKL L I +I+ + LK LE
Sbjct: 608 LESMENLTYLDLSNNEISNIDS-------IKKLVNLKKLVLHKNKIGSIKSIESLKYLEE 660
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
LDLS+N L G + L L+ L LDLS N ++ L +L NL+ L L + I+
Sbjct: 661 LDLSNN--LIGDITALGGLSQLTRLDLSRNGIVSINSLGSLINLQYLSLYENKIS 713
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
L+++ KL+L G GI +QGL ++NL LDLS+N +++ + L NL+ L L N+
Sbjct: 589 LSSITKLELSGRGIVDLQGLESMENLTYLDLSNNEI--SNIDSIKKLVNLKKLVLHKNKI 646
Query: 91 LTTLGLANLPNLKTLDLRDC---GITTIQGIQQFT 122
+ + +L L+ LDL + IT + G+ Q T
Sbjct: 647 GSIKSIESLKYLEELDLSNNLIGDITALGGLSQLT 681
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ +L+YL+ LDLS N G +T LG L+ L +LDL GI +I L L NL+ L
Sbjct: 652 IESLKYLEELDLSNN---LIGDITALG--GLSQLTRLDLSRNGIVSINSLGSLINLQYLS 706
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDL--SGNQNLTTLGLANLPNLKTLDL 107
L N G E L L +L+ L L SG N + LA NL+ D
Sbjct: 707 LYENKISEGE-EYLKKLYSLRELYLKNSGVSNF-DVTLAYYNNLEKKDF 753
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
+L N+K+LD I + G+ + LE L+LS SL L L NL+ +++S
Sbjct: 352 TDLENIKELDFHNAHIEKLNGIENMTALEKLNLSGTDIKDISL--LKCLINLKEVNISNT 409
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
L N ++ L+L + +TT+Q I++F
Sbjct: 410 SISDITALKNSIYIRYLNLNETNVTTLQVIEKF 442
>gi|405751552|ref|YP_006675017.1| internalin I [Listeria monocytogenes SLCC2378]
gi|404220752|emb|CBY72115.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2378]
Length = 1775
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ L LS N ++T+ + + ++ LK L LDGCGIT+I L L LE LD
Sbjct: 382 LNNLPKLQTLILSDNKDLTNIN----AITDMPQLKTLALDGCGITSIGTLDNLPKLEKLD 437
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
L N S+ + +L L LD+S N LTT+G L LP L+ L++ ++ + +
Sbjct: 438 LKENQLT--SISEINDLPRLSYLDVSVNY-LTTIGELKKLPLLEWLNVSSNRLSDVSTLT 494
Query: 120 QFTS 123
F S
Sbjct: 495 NFPS 498
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
++ LR L++ + NY T G+L+ L++LTNL +L+L G I+ I GL+ L L L
Sbjct: 652 VSKLRNLELQNNYLNYTGTEGNLS--ALSDLTNLTELNLRDNGYISDISGLSTLSRLIYL 709
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+L SN + L+NLT LQ L L NQ L++L NL L L I I
Sbjct: 710 NLDSNKI--KDISALSNLTTLQELTLENNQIEDISALSDLDNLNKLALSKNKIIDI 763
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 12/106 (11%)
Query: 23 LTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY-YLH--GSLEGLANLT 78
+T +G + NL L +DL I ++ + L LE L ++ NY YL G+++G++ L
Sbjct: 597 ITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTMDGVSKLR 656
Query: 79 NLQV----LDLSGNQ-NLTTLGLANLPNLKTLDLRDCG-ITTIQGI 118
NL++ L+ +G + NL+ L++L NL L+LRD G I+ I G+
Sbjct: 657 NLELQNNYLNYTGTEGNLS--ALSDLTNLTELNLRDNGYISDISGL 700
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 22/99 (22%)
Query: 40 DGCGITTIQGLAKLKNLEALDLSSNYYLH---------------------GSLEGLANLT 78
D I+ I+GL L+NL +L+LS N +L G+ L
Sbjct: 165 DPTDISNIEGLQYLENLTSLNLSENNISDLAPIKDLVNLVSLNLSSNRTLVNLSGVEGLV 224
Query: 79 NLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQ 116
NLQ L++S N+ L + +A LP LK + + C I T++
Sbjct: 225 NLQELNVSANKALEDISQVAALPVLKEISAQGCNIKTLE 263
>gi|226949026|ref|YP_002804117.1| leucine rich repeat-containing protein [Clostridium botulinum A2
str. Kyoto]
gi|226842584|gb|ACO85250.1| leucine rich repeat protein [Clostridium botulinum A2 str. Kyoto]
Length = 1355
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 13/124 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L +LRYL + N N+T G L+ L NLT+L+ LDL GI+ I L KL+NL L
Sbjct: 874 LTSLRYLYL----NNMNLT-GDLS--FLENLTDLRILDLSRTGISNISILDKLRNLSELY 926
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQ 119
L N + L L NLTNL LDL N ++T++ L NL NL+ L L IT + IQ
Sbjct: 927 LGGNNII--DLSSLENLTNLVKLDLVENNDITSIYALRNLINLRYLTL---PITNPKKIQ 981
Query: 120 QFTS 123
+++
Sbjct: 982 DYSA 985
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L ++ L LDLS N NI S + L NLKKL L I +I+ + LK LE
Sbjct: 608 LESMENLTYLDLSNNEISNIDS-------IKKLVNLKKLVLHKNKIGSIKSIESLKYLEE 660
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
LDLS+N L G + L L+ L LDLS N ++ L +L NL+ L L + I+
Sbjct: 661 LDLSNN--LIGDITALGGLSQLTRLDLSRNGIVSINSLGSLINLQYLSLYENKIS 713
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
L+++ KL+L G GI +QGL ++NL LDLS+N +++ + L NL+ L L N+
Sbjct: 589 LSSITKLELSGRGIVDLQGLESMENLTYLDLSNNEI--SNIDSIKKLVNLKKLVLHKNKI 646
Query: 91 LTTLGLANLPNLKTLDLRDC---GITTIQGIQQFT 122
+ + +L L+ LDL + IT + G+ Q T
Sbjct: 647 GSIKSIESLKYLEELDLSNNLIGDITALGGLSQLT 681
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
+L N+K+LD I + G+ + LE L+LS SL L L NL+ +++S
Sbjct: 352 TDLENIKELDFHNAHIEKLNGIENMTALEKLNLSGTDIKDISL--LKCLINLKEVNISNT 409
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
L N ++ L+L + +TT+Q I++F
Sbjct: 410 SISDITALKNSIYIRYLNLNETNVTTLQVIEKF 442
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ +L+YL+ LDLS N G +T LG L+ L +LDL GI +I L L NL+ L
Sbjct: 652 IESLKYLEELDLSNN---LIGDITALG--GLSQLTRLDLSRNGIVSINSLGSLINLQYLS 706
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDL--SGNQNLTTLGLANLPNLKTLDL 107
L N G E L L +L+ L L SG N + LA NL+ D
Sbjct: 707 LYENKISEGE-EYLKKLYSLRELYLKNSGVSNF-DVTLAYYNNLEKKDF 753
>gi|226222958|ref|YP_002757065.1| internalin proteins, peptidoglycan bound protein (LPXTG motif)
[Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|386731097|ref|YP_006204593.1| internalin protein, peptidoglycan bound protein (LPXTG motif)
[Listeria monocytogenes 07PF0776]
gi|406703104|ref|YP_006753458.1| internalin I (LPXTG motif) [Listeria monocytogenes L312]
gi|225875420|emb|CAS04117.1| Putative internalin proteins, putative peptidoglycan bound protein
(LPXTG motif) [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|384389855|gb|AFH78925.1| internalin protein, peptidoglycan bound protein (LPXTG motif)
[Listeria monocytogenes 07PF0776]
gi|406360134|emb|CBY66407.1| internalin I (LPXTG motif) [Listeria monocytogenes L312]
Length = 1775
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ L LS N ++T+ + + ++ LK L LDGCGIT+I L L LE LD
Sbjct: 382 LNNLPKLQTLILSDNKDLTNIN----AITDMPQLKTLALDGCGITSIGTLDNLPKLEKLD 437
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
L N S+ + +L L LD+S N LTT+G L LP L+ L++ ++ + +
Sbjct: 438 LKENQLT--SISEINDLPRLSYLDVSVNY-LTTIGELKKLPLLEWLNVSSNRLSDVSTLT 494
Query: 120 QFTS 123
F S
Sbjct: 495 NFPS 498
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
++ LR L++ + NY T G+L+ L++LTNL +L+L G I+ I GL+ L L L
Sbjct: 652 VSKLRNLELQNNYLNYTGTEGNLS--ALSDLTNLTELNLRDNGYISDISGLSTLSRLIYL 709
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+L SN + L+NLT LQ L L NQ L++L NL L L I I
Sbjct: 710 NLDSNKI--KDISALSNLTTLQELTLENNQIEDISALSDLDNLNKLALSKNKIIDI 763
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 12/106 (11%)
Query: 23 LTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY-YLH--GSLEGLANLT 78
+T +G + NL L +DL I ++ + L LE L ++ NY YL G+++G++ L
Sbjct: 597 ITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTMDGVSKLR 656
Query: 79 NLQV----LDLSGNQ-NLTTLGLANLPNLKTLDLRDCG-ITTIQGI 118
NL++ L+ +G + NL+ L++L NL L+LRD G I+ I G+
Sbjct: 657 NLELQNNYLNYTGTEGNLS--ALSDLTNLTELNLRDNGYISDISGL 700
Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 22/99 (22%)
Query: 40 DGCGITTIQGLAKLKNLEALDLSSNYYLH---------------------GSLEGLANLT 78
D I+ I+GL L+NL +L+LS N +L G+ L
Sbjct: 165 DPTDISNIEGLQYLENLTSLNLSENNISDLAPIKDLVNLVSLNLSSNRTLVNLSGVEGLV 224
Query: 79 NLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQ 116
NLQ L++S N+ L + +A LP LK + + C I T++
Sbjct: 225 NLQELNVSANKALEDISQVAALPVLKEISAQGCNIKTLE 263
>gi|124009437|ref|ZP_01694114.1| leucine-rich-repeat protein [Microscilla marina ATCC 23134]
gi|123984985|gb|EAY24943.1| leucine-rich-repeat protein [Microscilla marina ATCC 23134]
Length = 966
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LT L+ L+L I+ I+ LA +E L+LS N L LA L +L+ L+L+
Sbjct: 105 LVGLTQLQTLNLSSNHISDIKVLANFPTMEKLNLSQNTI--ADLSPLAGLESLKTLNLNW 162
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
NQ L L +LPNL TL L C ++ IQ ++Q
Sbjct: 163 NQTLDLGTLPSLPNLTTLYLNSCQLSDIQALKQ 195
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 60/119 (50%), Gaps = 12/119 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
LA+L+ L+ L L+ N + L LA L L+KL L+ I +++ LAKL+ L L
Sbjct: 237 LASLQTLEALSLNKN------RIKDLAPLAGLITLRKLYLNENKIISLKPLAKLQKLTVL 290
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L+ N ++ L +L L LDLS NQ + L +L L L L G+ IQ I
Sbjct: 291 TLTDNKI--QDVQALHSLLQLDTLDLSQNQIMDVSPLQSLARLTGLGL---GVNQIQDI 344
>gi|254992878|ref|ZP_05275068.1| internalin proteins, peptidoglycan bound protein (LPXTG motif)
[Listeria monocytogenes FSL J2-064]
Length = 1775
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ L LS N ++T+ + + ++ LK L LDGCGIT+I L L LE LD
Sbjct: 382 LNNLPKLQTLILSDNKDLTNIN----AITDMPQLKTLALDGCGITSIGTLDNLPKLEKLD 437
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
L N S+ + +L L LD+S N LTT+G L LP L+ L++ ++ + +
Sbjct: 438 LKENQLT--SISEINDLPRLSYLDVSVNY-LTTIGELKKLPLLEWLNVSSNRLSDVSTLT 494
Query: 120 QFTS 123
F S
Sbjct: 495 NFPS 498
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
++ LR L++ + NY T G+L+ L++LTNL +L+L G I+ I GL+ L L L
Sbjct: 652 VSKLRNLELQNNYLNYTGTEGNLS--ALSDLTNLTELNLRDNGYISDISGLSTLSRLIYL 709
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+L SN + L+NLT LQ L L NQ L++L NL L L I I
Sbjct: 710 NLDSNKI--KDISALSNLTTLQELTLENNQIEDISALSDLDNLNKLALSKNKIIDI 763
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 12/106 (11%)
Query: 23 LTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY-YLH--GSLEGLANLT 78
+T +G + NL L +DL I ++ + L LE L ++ NY YL G+++G++ L
Sbjct: 597 ITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTMDGVSKLR 656
Query: 79 NLQV----LDLSGNQ-NLTTLGLANLPNLKTLDLRDCG-ITTIQGI 118
NL++ L+ +G + NL+ L++L NL L+LRD G I+ I G+
Sbjct: 657 NLELQNNYLNYTGTEGNLS--ALSDLTNLTELNLRDNGYISDISGL 700
Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 22/99 (22%)
Query: 40 DGCGITTIQGLAKLKNLEALDLSSNYYLH---------------------GSLEGLANLT 78
D I+ I+GL L+NL +L+LS N +L G+ L
Sbjct: 165 DPTDISNIEGLQYLENLTSLNLSENNISDLAPIKDLVNLVSLNLSSNRTLVNLSGVEGLV 224
Query: 79 NLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQ 116
NLQ L++S N+ L + +A LP LK + + C I T++
Sbjct: 225 NLQELNVSANKALEDISQVAALPVLKEISAQGCNIKTLE 263
>gi|254825619|ref|ZP_05230620.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
J1-194]
gi|293594862|gb|EFG02623.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
J1-194]
Length = 1775
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ L LS N ++T+ + + ++ LK L LDGCGIT+I L L LE LD
Sbjct: 382 LNNLPKLQTLILSDNKDLTNIN----AITDMPQLKTLALDGCGITSIGTLDNLPKLEKLD 437
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
L N S+ + +L L LD+S N LTT+G L LP L+ L++ ++ + +
Sbjct: 438 LKENQLT--SISEINDLPRLSYLDVSVNY-LTTIGELKKLPLLEWLNVSSNRLSDVSTLT 494
Query: 120 QFTS 123
F S
Sbjct: 495 NFPS 498
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
++ LR L++ + NY T G+L+ L++LTNL +L+L G I+ I GL+ L L L
Sbjct: 652 VSKLRNLELQNNYLNYTGTEGNLS--ALSDLTNLTELNLRDNGYISDISGLSTLSRLIYL 709
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+L SN + L+NLT LQ L L NQ L++L NL L L I I
Sbjct: 710 NLDSNKI--KDISALSNLTTLQELTLENNQIEDISALSDLDNLNKLALSKNKIIDI 763
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 12/106 (11%)
Query: 23 LTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY-YLH--GSLEGLANLT 78
+T +G + NL L +DL I ++ + L LE L ++ NY YL G+++G++ L
Sbjct: 597 ITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTMDGVSKLR 656
Query: 79 NLQV----LDLSGNQ-NLTTLGLANLPNLKTLDLRDCG-ITTIQGI 118
NL++ L+ +G + NL+ L++L NL L+LRD G I+ I G+
Sbjct: 657 NLELQNNYLNYTGTEGNLS--ALSDLTNLTELNLRDNGYISDISGL 700
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 22/99 (22%)
Query: 40 DGCGITTIQGLAKLKNLEALDLSSNYYLH---------------------GSLEGLANLT 78
D I+ I+GL L+NL +L+LS N +L G+ L
Sbjct: 165 DPTDISNIEGLQYLENLTSLNLSENNISDLAPIKDLVNLVSLNLSSNRTLVNLSGVEGLV 224
Query: 79 NLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQ 116
NLQ L++S N+ L + +A LP LK + + C I T++
Sbjct: 225 NLQELNVSANKALEDISQVAVLPVLKEISAQGCNIKTLE 263
>gi|168185063|ref|ZP_02619727.1| ABC transporter permease protein [Clostridium botulinum Bf]
gi|182671889|gb|EDT83850.1| ABC transporter permease protein [Clostridium botulinum Bf]
Length = 1355
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 13/124 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L +LRYL + N N+T G L+ L NLT+L+ LDL GI+ I L KL+NL L
Sbjct: 874 LTSLRYLYL----NNMNLT-GDLS--FLENLTDLRILDLSRTGISNISILDKLRNLSELY 926
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQ 119
L N + L L NLTNL LDL N ++T++ L NL NL+ L L IT + IQ
Sbjct: 927 LGGNNII--DLSSLENLTNLVKLDLVENNDITSIYALRNLINLRYLTL---PITNPKKIQ 981
Query: 120 QFTS 123
+++
Sbjct: 982 DYSA 985
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L ++ L LDLS N NI S + L NLKKL L I +I+ + LK LE
Sbjct: 608 LESMENLTYLDLSNNEISNIDS-------IKKLANLKKLVLHKNKIGSIKSIESLKYLEE 660
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
LDLS+N L G + L L+ L LDLS N ++ L +L NL+ L L + I+
Sbjct: 661 LDLSNN--LIGDITALGGLSQLTRLDLSRNGIVSINSLGSLINLQYLSLYENKIS 713
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
L+++ KL+L G GI +QGL ++NL LDLS+N +++ + L NL+ L L N+
Sbjct: 589 LSSITKLELSGRGIVDLQGLESMENLTYLDLSNNEI--SNIDSIKKLANLKKLVLHKNKI 646
Query: 91 LTTLGLANLPNLKTLDLRDC---GITTIQGIQQFT 122
+ + +L L+ LDL + IT + G+ Q T
Sbjct: 647 GSIKSIESLKYLEELDLSNNLIGDITALGGLSQLT 681
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
+L N+K+LD I + G+ + LE L+LS SL L L NL+ +++S
Sbjct: 352 TDLENIKELDFHNAHIEKLNGIENMTALEKLNLSGTDIKDISL--LKCLINLKEVNISNT 409
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
L N ++ L+L + +TT+Q I++F
Sbjct: 410 SISDITALKNSIYIRYLNLNETNVTTLQVIEKF 442
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ +L+YL+ LDLS N G +T LG L+ L +LDL GI +I L L NL+ L
Sbjct: 652 IESLKYLEELDLSNN---LIGDITALG--GLSQLTRLDLSRNGIVSINSLGSLINLQYLS 706
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDL--SGNQNLTTLGLANLPNLKTLDL 107
L N G E L L +L+ L L SG N + LA NL+ D
Sbjct: 707 LYENKISEGE-EYLKKLYSLRELYLKNSGVSNF-DVTLAYYNNLEKKDF 753
>gi|405754422|ref|YP_006677886.1| internalin I [Listeria monocytogenes SLCC2540]
gi|404223622|emb|CBY74984.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2540]
Length = 1775
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ L LS N ++T+ + + ++ LK L LDGCGIT+I L L LE LD
Sbjct: 382 LNNLPKLQTLILSDNKDLTNIN----AITDMPQLKTLALDGCGITSIGTLDNLPKLEKLD 437
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
L N S+ + +L L LD+S N LTT+G L LP L+ L++ ++ + +
Sbjct: 438 LKENQLT--SISEINDLPRLSYLDVSVNY-LTTIGELKKLPLLEWLNVSSNRLSDVSTLT 494
Query: 120 QFTS 123
F S
Sbjct: 495 NFPS 498
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
++ LR L++ + NY T G+L+ L++LTNL +L+L G I+ I GL+ L L L
Sbjct: 652 VSKLRNLELQNNYLNYTGTEGNLS--ALSDLTNLTELNLRDNGYISDISGLSTLSRLIYL 709
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+L SN + L+NLT LQ L L NQ L++L NL L L I I
Sbjct: 710 NLDSNKI--KDISALSNLTTLQELTLENNQIEDISALSDLDNLNKLALSKNKIIDI 763
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 12/106 (11%)
Query: 23 LTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY-YLH--GSLEGLANLT 78
+T +G + NL L +DL I ++ + L LE L ++ NY YL G+++G++ L
Sbjct: 597 ITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTMDGVSKLR 656
Query: 79 NLQV----LDLSGNQ-NLTTLGLANLPNLKTLDLRDCG-ITTIQGI 118
NL++ L+ +G + NL+ L++L NL L+LRD G I+ I G+
Sbjct: 657 NLELQNNYLNYTGTEGNLS--ALSDLTNLTELNLRDNGYISDISGL 700
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 22/99 (22%)
Query: 40 DGCGITTIQGLAKLKNLEALDLSSNYYLH---------------------GSLEGLANLT 78
D I+ I+GL L+NL +L+LS N +L G+ L
Sbjct: 165 DPTDISNIEGLQYLENLTSLNLSENNISDLAPIKDLVNLVSLNLSSNRTLVNLSGVEGLV 224
Query: 79 NLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQ 116
NLQ L++S N+ L + +A LP LK + + C I T++
Sbjct: 225 NLQELNVSANKALEDISQVAALPVLKEISAQGCNIKTLE 263
>gi|254854582|ref|ZP_05243930.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
R2-503]
gi|300766483|ref|ZP_07076434.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
N1-017]
gi|404279887|ref|YP_006680785.1| internalin I [Listeria monocytogenes SLCC2755]
gi|404285703|ref|YP_006692289.1| internalin I [Listeria monocytogenes serotype 7 str. SLCC2482]
gi|258607981|gb|EEW20589.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
R2-503]
gi|300512809|gb|EFK39905.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
N1-017]
gi|404226522|emb|CBY47927.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2755]
gi|404244632|emb|CBY02857.1| internalin I (LPXTG motif) [Listeria monocytogenes serotype 7 str.
SLCC2482]
Length = 1775
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ L LS N ++T+ + + ++ LK L LDGCGIT+I L L LE LD
Sbjct: 382 LNNLPKLQTLILSDNKDLTNIN----AITDMPQLKTLALDGCGITSIGTLDNLPKLEKLD 437
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
L N S+ + +L L LD+S N LTT+G L LP L+ L++ ++ + +
Sbjct: 438 LKENQLT--SISEINDLPRLSYLDVSVNY-LTTIGELKKLPLLEWLNVSSNRLSDVSTLT 494
Query: 120 QFTS 123
F S
Sbjct: 495 NFPS 498
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
++ LR L++ + NY T G+L+ L++LTNL +L+L G I+ I GL+ L L L
Sbjct: 652 VSKLRNLELQNNYLNYTGTEGNLS--ALSDLTNLTELNLRDNGYISDISGLSTLSRLIYL 709
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+L SN + L+NLT LQ L L NQ L++L NL L L I I
Sbjct: 710 NLDSNKI--KDISALSNLTTLQELTLENNQIEDISALSDLDNLNKLALSKNKIIDI 763
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 12/106 (11%)
Query: 23 LTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY-YLH--GSLEGLANLT 78
+T +G + NL L +DL I ++ + L LE L ++ NY YL G+++G++ L
Sbjct: 597 ITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTMDGVSKLR 656
Query: 79 NLQV----LDLSGNQ-NLTTLGLANLPNLKTLDLRDCG-ITTIQGI 118
NL++ L+ +G + NL+ L++L NL L+LRD G I+ I G+
Sbjct: 657 NLELQNNYLNYTGTEGNLS--ALSDLTNLTELNLRDNGYISDISGL 700
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 22/99 (22%)
Query: 40 DGCGITTIQGLAKLKNLEALDLSSNYYLH---------------------GSLEGLANLT 78
D I+ I+GL L+NL +L+LS N +L G+ L
Sbjct: 165 DPTDISNIEGLQYLENLTSLNLSENNISDLAPIKDLVNLVSLNLSSNRTLVNLSGVEGLV 224
Query: 79 NLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQ 116
NLQ L++S N+ L + +A LP LK + + C I T++
Sbjct: 225 NLQELNVSANKALEDISQVAALPVLKEISAQGCNIKTLE 263
>gi|255521411|ref|ZP_05388648.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
J1-175]
Length = 1775
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ L LS N ++T+ + + ++ LK L LDGCGIT+I L L LE LD
Sbjct: 382 LNNLPKLQTLILSDNKDLTNIN----AITDMPQLKTLALDGCGITSIGTLDNLPKLEKLD 437
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
L N S+ + +L L LD+S N LTT+G L LP L+ L++ ++ + +
Sbjct: 438 LKENQLT--SISEINDLPRLSYLDVSVNY-LTTIGELKKLPLLEWLNVSSNRLSDVSTLT 494
Query: 120 QFTS 123
F S
Sbjct: 495 NFPS 498
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
++ LR L++ + NY T G+L+ L++LTNL +L+L G I+ I GL+ L L
Sbjct: 652 VSKLRNLELQNNYLNYTGTEGNLS--ALSDLTNLTELNLRDNGYISDISGLSTQSRLIYL 709
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+L SN + L+NLT LQ L L NQ L++L NL L L I I
Sbjct: 710 NLDSNKI--KDISALSNLTTLQELTLENNQIEDISALSDLDNLNKLALSKNKIIDI 763
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 12/106 (11%)
Query: 23 LTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY-YLH--GSLEGLANLT 78
+T +G + NL L +DL I ++ + L LE L ++ NY YL G+++G++ L
Sbjct: 597 ITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTMDGVSKLR 656
Query: 79 NLQV----LDLSGNQ-NLTTLGLANLPNLKTLDLRDCG-ITTIQGI 118
NL++ L+ +G + NL+ L++L NL L+LRD G I+ I G+
Sbjct: 657 NLELQNNYLNYTGTEGNLS--ALSDLTNLTELNLRDNGYISDISGL 700
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 22/99 (22%)
Query: 40 DGCGITTIQGLAKLKNLEALDLSSNYYLH---------------------GSLEGLANLT 78
D I+ I+GL L+NL +L+LS N +L G+ L
Sbjct: 165 DPTDISNIEGLQYLENLTSLNLSENNISDLAPIKDLVNLVSLNLSSNRTLVNLSGVEGLV 224
Query: 79 NLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQ 116
NLQ L++S N+ L + +A LP LK + + C I T++
Sbjct: 225 NLQELNVSANKALEDISQVAALPVLKEISAQGCNIKTLE 263
>gi|46906570|ref|YP_012959.1| cell wall surface anchor family protein [Listeria monocytogenes
serotype 4b str. F2365]
gi|47091468|ref|ZP_00229265.1| cell wall surface anchor family protein [Listeria monocytogenes
str. 4b H7858]
gi|81830300|sp|Q723X5.1|INLI_LISMF RecName: Full=Internalin-I; Flags: Precursor
gi|46879835|gb|AAT03136.1| cell wall surface anchor family protein [Listeria monocytogenes
serotype 4b str. F2365]
gi|47020145|gb|EAL10881.1| cell wall surface anchor family protein [Listeria monocytogenes
str. 4b H7858]
Length = 1775
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ L LS N ++T+ + + ++ LK L LDGCGIT+I L L LE LD
Sbjct: 382 LNNLPKLQTLILSDNKDLTNIN----AITDMPQLKTLALDGCGITSIGTLDNLPKLEKLD 437
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
L N S+ + +L L LD+S N LTT+G L LP L+ L++ ++ + +
Sbjct: 438 LKENQLT--SISEINDLPRLSYLDVSVNY-LTTIGELKKLPLLEWLNVSSNRLSDVSTLT 494
Query: 120 QFTS 123
F S
Sbjct: 495 NFPS 498
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
++ LR L++ + NY T G+L+ L++LTNL +L+L G I+ I GL+ L L L
Sbjct: 652 VSKLRNLELQNNYLNYTGTEGNLS--ALSDLTNLTELNLRDNGYISDISGLSTLSRLIYL 709
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+L SN + L+NLT LQ L L NQ L++L NL L L I I
Sbjct: 710 NLDSNKI--KDISALSNLTTLQELTLENNQIEDISALSDLDNLNKLALSKNKIIDI 763
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 12/106 (11%)
Query: 23 LTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY-YLH--GSLEGLANLT 78
+T +G + NL L +DL I ++ + L LE L ++ NY YL G+++G++ L
Sbjct: 597 ITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTMDGVSKLR 656
Query: 79 NLQV----LDLSGNQ-NLTTLGLANLPNLKTLDLRDCG-ITTIQGI 118
NL++ L+ +G + NL+ L++L NL L+LRD G I+ I G+
Sbjct: 657 NLELQNNYLNYTGTEGNLS--ALSDLTNLTELNLRDNGYISDISGL 700
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 22/99 (22%)
Query: 40 DGCGITTIQGLAKLKNLEALDLSSNYYLH---------------------GSLEGLANLT 78
D I+ I+GL L+NL +L+LS N +L G+ L
Sbjct: 165 DPTDISNIEGLQYLENLTSLNLSENNISDLAPIKDLVNLVSLNLSSNRTLVNLSGVEGLV 224
Query: 79 NLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQ 116
NLQ L++S N+ L + +A LP LK + + C I T++
Sbjct: 225 NLQELNVSANKALEDISQVAALPVLKEISAQGCNIKTLE 263
>gi|170759229|ref|YP_001787353.1| internalin [Clostridium botulinum A3 str. Loch Maree]
gi|169406218|gb|ACA54629.1| leucine-rich repeat protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 332
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
++ L NL+ L++ C + + + LKNL+ LD+S+N +L GL NLTNL+ L +S
Sbjct: 142 ISTLKNLENLEIIDCKLNDVSIVKNLKNLKRLDISNNEI--NNLNGLENLTNLKELYMSS 199
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFTS 123
N N+T L + NL L LD+ D IT+I+ ++ S
Sbjct: 200 N-NMTNLKPIHNLLKLTNLDISDNKITSIKELKNMKS 235
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 10/122 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL L+++D N S+ + NL NLK+LD+ I + GL L NL+ L
Sbjct: 145 LKNLENLEIIDCKLN----DVSIVK----NLKNLKRLDISNNEINNLNGLENLTNLKELY 196
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+SSN +L+ + NL L LD+S N+ + L N+ +++ L++ + ++ ++GI+
Sbjct: 197 MSSNNM--TNLKPIHNLLKLTNLDISDNKITSIKELKNMKSIRELNICNNNLSDLEGIEN 254
Query: 121 FT 122
+
Sbjct: 255 MS 256
>gi|46446522|ref|YP_007887.1| hypothetical protein pc0888 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400163|emb|CAF23612.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 653
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 63/120 (52%), Gaps = 14/120 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNL---KKLDLDGCGITTIQGLAKLK--- 54
L L LQ L+LS Y LT GLA+LT L + L+L C T GL LK
Sbjct: 319 LTPLTALQHLNLSRCYY----KLTDAGLAHLTPLTALQHLNLSFCDKLTDAGLVHLKLLT 374
Query: 55 NLEALDLSSNYYLHGS-LEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKT---LDLRDC 110
L+ LDL + L G+ L L LT LQ LDLSG LT +GLA+L L T LDL+ C
Sbjct: 375 GLQHLDLREFWELTGAGLAHLTTLTALQHLDLSGCDKLTDVGLAHLTPLTTLQHLDLKRC 434
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 64/133 (48%), Gaps = 15/133 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLT---NLKKLDLDGCGITTIQGLAKLK--- 54
L L LQ LDLS LT +GLA+LT L+ LDL C T GL LK
Sbjct: 395 LTTLTALQHLDLSG-----CDKLTDVGLAHLTPLTTLQHLDLKRCRNLTNAGLVHLKLLT 449
Query: 55 NLEALDLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDC 110
L+ L+LS Y+L L L LT LQ LDLS LT GLA+L L+ LDL C
Sbjct: 450 GLQHLNLSECYHLTDAGLAHLTPLTALQHLDLSQCSKLTDDGLAHLTPLTALQHLDLSQC 509
Query: 111 GITTIQGIQQFTS 123
T G+ T
Sbjct: 510 SKLTDDGLAHLTP 522
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 58/105 (55%), Gaps = 10/105 (9%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL---DLSS 63
LQ L+LS Y++T L L LT L+ LDL C T GLA L L AL DLS
Sbjct: 451 LQHLNLSECYHLTDAGLAHL--TPLTALQHLDLSQCSKLTDDGLAHLTPLTALQHLDLSQ 508
Query: 64 NYYLHGSLEGLANLTNL---QVLDLSGNQNLTTLGLANLPNLKTL 105
L + +GLA+LT L Q L L+ +NLT GLA+L L+TL
Sbjct: 509 CSKL--TDDGLAHLTPLTALQHLVLARCRNLTDAGLAHLTPLETL 551
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L LQ LDLS +T L L LT L+ LDL C T GLA L L AL
Sbjct: 470 LTPLTALQHLDLSQCSKLTDDGLAHL--TPLTALQHLDLSQCSKLTDDGLAHLTPLTALQ 527
Query: 61 ---LSSNYYLHGSLEGLANLT---NLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCG 111
L+ L + GLA+LT LQ L+LSG LT GLA+L L+ LDL C
Sbjct: 528 HLVLARCRNLTDA--GLAHLTPLETLQHLNLSGGYKLTGAGLAHLRPLVALQHLDLSYCN 585
Query: 112 ITTIQGIQQFTS 123
T G+ T
Sbjct: 586 GLTDAGLAHLTP 597
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L L LQ LDLS +T L L LT L+ L L C T GLA L LE L
Sbjct: 495 LTPLTALQHLDLSQCSKLTDDGLAHL--TPLTALQHLVLARCRNLTDAGLAHLTPLETLQ 552
Query: 60 --DLSSNYYLHGS-LEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
+LS Y L G+ L L L LQ LDLS LT GLA+L L+ LDL C
Sbjct: 553 HLNLSGGYKLTGAGLAHLRPLVALQHLDLSYCNGLTDAGLAHLTPLVALQHLDLSYCDGL 612
Query: 114 TIQGI 118
T G+
Sbjct: 613 TDAGL 617
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 50/120 (41%), Gaps = 26/120 (21%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY 66
LQ LDL + +T L L LT L+ LDL GC T GLA L
Sbjct: 376 LQHLDLREFWELTGAGLAHL--TTLTALQHLDLSGCDKLTDVGLAHL------------- 420
Query: 67 LHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLP---NLKTLDLRDCGITTIQGIQQFTS 123
LT LQ LDL +NLT GL +L L+ L+L +C T G+ T
Sbjct: 421 --------TPLTTLQHLDLKRCRNLTNAGLVHLKLLTGLQHLNLSECYHLTDAGLAHLTP 472
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA---LD 60
L ++ + S N +T L L L + NLK L L+ C + T GLA L L A L+
Sbjct: 222 LNEIEAFNFSDNAYLTDAHL--LALKDCKNLKVLHLEKCQVITDDGLAHLTPLTALQHLE 279
Query: 61 LSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
LS L L L LT LQ L+LS LT GLA+L L L
Sbjct: 280 LSDCRKLTDAGLAHLTPLTALQHLNLSFCDKLTDAGLAHLTPLTAL 325
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L LQ L+LS Y +T L L L L+ LDL C T GLA L L AL
Sbjct: 545 LTPLETLQHLNLSGGYKLTGAGLAHL--RPLVALQHLDLSYCNGLTDAGLAHLTPLVALQ 602
Query: 61 LSSNYYLHG----SLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
Y G L L L LQ LDLS LT GLA+ L +
Sbjct: 603 HLDLSYCDGLTDAGLTHLRPLVALQHLDLSYCDGLTDAGLAHFKFLAAI 651
>gi|348530936|ref|XP_003452966.1| PREDICTED: centrosomal protein of 97 kDa-like [Oreochromis
niloticus]
Length = 758
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 17 NITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
++ S L R+ G++ LT L+ L+L I I+GL L +L+ L+LS N +E L
Sbjct: 62 SVASNRLVRMMGVSRLTELRVLNLPNNSIGYIEGLRDLPHLKWLNLSGNNI--KVIEQLN 119
Query: 76 NLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGI 118
N +LQ LDLS N N++ +G L L LKTL L ITT++ +
Sbjct: 120 NCVSLQHLDLSDN-NISAIGDLTKLVALKTLLLHGNSITTLRTV 162
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 34 LKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT 93
L++L + + + G+++L L L+L +N G +EGL +L +L+ L+LSGN
Sbjct: 58 LQQLSVASNRLVRMMGVSRLTELRVLNLPNNSI--GYIEGLRDLPHLKWLNLSGNNIKVI 115
Query: 94 LGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
L N +L+ LDL D I+ I + + +
Sbjct: 116 EQLNNCVSLQHLDLSDNNISAIGDLTKLVA 145
>gi|422411730|ref|ZP_16488689.1| internalin A, partial [Listeria innocua FSL S4-378]
gi|313620695|gb|EFR91985.1| internalin A [Listeria innocua FSL S4-378]
Length = 434
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 17 NITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
N+++ LT L L L+NL L +G I +QGL+ LKNL LDLS+N + + LA
Sbjct: 187 NVSNNKLTNLDELQALSNLGVLYANGNQINNLQGLSTLKNLFLLDLSTNQIMDTT--PLA 244
Query: 76 NLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
LTN+Q L LS NQ GL++L NL LD+ I+ I+ + T
Sbjct: 245 GLTNVQTLYLSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLT 291
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 30 NLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
+L + L L GI++I+G+ L NL L LSSN + L LTNL +L LSGN
Sbjct: 69 DLDTINSLTLTSKGISSIEGMNYLTNLGTLILSSNQV--SDISPLKGLTNLTMLQLSGNP 126
Query: 90 NLTTLGLANLPNLKTLDLRDCGITTI 115
L+NL NL+ LD+ D IT I
Sbjct: 127 ISDISALSNLKNLQALDINDAQITDI 152
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 27/139 (19%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L+NL+ LQ LD I +T + L+ LTNLK L L + + G+ L+ L +L
Sbjct: 133 LSNLKNLQALD------INDAQITDITPLSGLTNLKGLGLYNNQLENLSGVNNLQQLRSL 186
Query: 60 DLSSNY----------------YLHGS----LEGLANLTNLQVLDLSGNQNLTTLGLANL 99
++S+N Y +G+ L+GL+ L NL +LDLS NQ + T LA L
Sbjct: 187 NVSNNKLTNLDELQALSNLGVLYANGNQINNLQGLSTLKNLFLLDLSTNQIMDTTPLAGL 246
Query: 100 PNLKTLDLRDCGITTIQGI 118
N++TL L + I+ + G+
Sbjct: 247 TNVQTLYLSNNQISDVTGL 265
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LTNL L L G I+ I L+ LKNL+ALD+ N + L+ LTNL+ L L
Sbjct: 111 LKGLTNLTMLQLSGNPISDISALSNLKNLQALDI--NDAQITDITPLSGLTNLKGLGLYN 168
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
NQ G+ NL L++L++ + +T + +Q
Sbjct: 169 NQLENLSGVNNLQQLRSLNVSNNKLTNLDELQ 200
>gi|326504708|dbj|BAK06645.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 609
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 7 LQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN 64
L+ ++LS N+ +I +GSL + L LDL I TI+GL +L L L LS N
Sbjct: 391 LRAVNLSGNFIAHIPAGSLPK-------GLHTLDLSRNSIATIEGLRELTRLRVLSLSYN 443
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
GL++ T ++ L L+GN+ GL L L LDL ITT +G+ Q +
Sbjct: 444 RIARIG-HGLSSCTAIRELYLAGNKMSDVEGLHRLLKLAVLDLSFNKITTTKGLGQLVA 501
>gi|198428058|ref|XP_002125791.1| PREDICTED: similar to protein phosphatase 1, regulatory subunit 7
[Ciona intestinalis]
Length = 331
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 65/123 (52%), Gaps = 9/123 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L +L L+ LDLS N T GL NL LKK+ L T IQ L+ L +L L+
Sbjct: 105 LEDLVLLESLDLSFNLMRTIE-----GLENLVKLKKIYLLTNKFTKIQNLSHLTSLTMLE 159
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
L N ++EGL L NLQ L L N+ +TT+G L+ L NLK L L IT I+G+
Sbjct: 160 LGDNRI--RAIEGLETLKNLQELYLGKNK-ITTIGNLSELKNLKILALMSNRITKIEGLD 216
Query: 120 QFT 122
T
Sbjct: 217 ALT 219
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L NL++L L ITTI L++LKNL+ L L SN +EGL LTNL+ L +S
Sbjct: 170 GLETLKNLQELYLGKNKITTIGNLSELKNLKILALMSNRI--TKIEGLDALTNLEELYMS 227
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N GL N NL+TLD+ IT ++ + +
Sbjct: 228 HNAIEKIEGLENNTNLQTLDVAGNKITRVENLSHLSE 264
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L+ LQ L L N T G+L+ L NLK L L IT I+GL L NLE L
Sbjct: 171 LETLKNLQELYLGKNKITTIGNLSELK-----NLKILALMSNRITKIEGLDALTNLEELY 225
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGI 112
+S N +EGL N TNLQ LD++GN+ L++L L+ D I
Sbjct: 226 MSHNAI--EKIEGLENNTNLQTLDVAGNKITRVENLSHLSELEEFWANDNKI 275
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 21/108 (19%)
Query: 37 LDLDGCGITTIQGLAKLKNLEALDLSSN--YYLHG-------------------SLEGLA 75
+DL+ C I +I G +LK +E L L +N + G +E L
Sbjct: 47 VDLEHCRIGSIAGFERLKKVEELCLRNNLLKQIQGLGCLASTLTSLDLYDNRIKKIENLE 106
Query: 76 NLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
+L L+ LDLS N T GL NL LK + L T IQ + TS
Sbjct: 107 DLVLLESLDLSFNLMRTIEGLENLVKLKKIYLLTNKFTKIQNLSHLTS 154
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 32 TNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL 91
+ L LDL I I+ L L LE+LDLS N L ++EGL NL L+ + L N+
Sbjct: 87 STLTSLDLYDNRIKKIENLEDLVLLESLDLSFN--LMRTIEGLENLVKLKKIYLLTNKFT 144
Query: 92 TTLGLANLPNLKTLDLRDCGITTIQGIQ 119
L++L +L L+L D I I+G++
Sbjct: 145 KIQNLSHLTSLTMLELGDNRIRAIEGLE 172
>gi|156397309|ref|XP_001637834.1| predicted protein [Nematostella vectensis]
gi|156224949|gb|EDO45771.1| predicted protein [Nematostella vectensis]
Length = 618
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANLR L LD+ N I S GL++L +L+ L L I I L L L+ LD
Sbjct: 67 LANLRRLIFLDIYDN-QIEEIS----GLSSLKSLRVLMLGKNRIRKINNLEALTKLDVLD 121
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
L N +E L++LT L+VL+L+GN+ L ++ + +L L+LR I T++ + +
Sbjct: 122 LHGNRI--SKIENLSHLTELRVLNLAGNEILKVCNISGMRSLAELNLRRNKICTVEEVDR 179
Query: 121 FT 122
+
Sbjct: 180 LS 181
>gi|254933382|ref|ZP_05266741.1| cell wall surface anchor family protein [Listeria monocytogenes
HPB2262]
gi|405748685|ref|YP_006672151.1| internalin I [Listeria monocytogenes ATCC 19117]
gi|424822071|ref|ZP_18247084.1| Internalin-I [Listeria monocytogenes str. Scott A]
gi|293584944|gb|EFF96976.1| cell wall surface anchor family protein [Listeria monocytogenes
HPB2262]
gi|332310751|gb|EGJ23846.1| Internalin-I [Listeria monocytogenes str. Scott A]
gi|404217885|emb|CBY69249.1| internalin I (LPXTG motif) [Listeria monocytogenes ATCC 19117]
Length = 1775
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ L LS N ++T+ + + ++ LK L LDGCGIT+I L L LE LD
Sbjct: 382 LNNLPKLQTLILSDNKDLTNIN----AVTDMPQLKTLALDGCGITSIGTLDNLPKLEKLD 437
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
L N S+ + +L L LD+S N LTT+G L LP L+ L++ ++ + +
Sbjct: 438 LKENQLT--SISEINDLPRLSYLDVSVNY-LTTIGELKKLPLLEWLNVSSNRLSDVSTLT 494
Query: 120 QFTS 123
F S
Sbjct: 495 NFPS 498
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L NL L+L I+ + + L L +L+LSSN L +L G+ +L NLQ L++S
Sbjct: 174 GLQYLENLTSLNLSENNISDLAPIKDLVKLVSLNLSSNRTLV-NLSGVESLVNLQELNVS 232
Query: 87 GNQNLTTLG-LANLPNLKTLDLRDCGITTIQ 116
N+ L + +A+LP LK + + C I T++
Sbjct: 233 ANKALEDISEVASLPVLKEISAQGCNIKTLE 263
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
++ LR L++ + NY T G+L+ L++LTNL +L+L G I+ I GL+ L L L
Sbjct: 652 VSKLRNLELQNNYLNYTGTEGNLS--ALSDLTNLTELNLRDNGYISDISGLSTLSRLIYL 709
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+L SN + L+NLT LQ L L NQ L++L NL L L I I
Sbjct: 710 NLDSNKI--KDISALSNLTTLQELTLENNQIEDISALSDLDNLNKLALSKNKIIDI 763
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 12/106 (11%)
Query: 23 LTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY-YLH--GSLEGLANLT 78
+T +G + NL L +DL I ++ + L LE L ++ NY YL G+++G++ L
Sbjct: 597 ITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNYSYLRSLGTMDGVSKLR 656
Query: 79 NLQV----LDLSGNQ-NLTTLGLANLPNLKTLDLRDCG-ITTIQGI 118
NL++ L+ +G + NL+ L++L NL L+LRD G I+ I G+
Sbjct: 657 NLELQNNYLNYTGTEGNLS--ALSDLTNLTELNLRDNGYISDISGL 700
>gi|326516606|dbj|BAJ92458.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 876
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 19 TSGSLTRLGLANLTNLKKLDLDGCGI--TTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
TS + L +L NL+ LDL GC + + L L+N++ LDLS L E L +
Sbjct: 642 TSVKVIPDSLGSLNNLRTLDLSGCQKLESLPESLGSLENIQTLDLSVCDELKSLPECLGS 701
Query: 77 LTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCG 111
L NL LDLSG + L +L L +L L+TLDL CG
Sbjct: 702 LNNLDTLDLSGCRKLESLPKSLGSLKTLQTLDLSGCG 738
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITTI--QGLAKLKNL 56
L +L+ LQ LDLS G L L L +L L+++ L C + L LKNL
Sbjct: 723 LGSLKTLQTLDLSG-----CGKLESLPESLGSLKTLQRMHLFACHKLEFLPESLGGLKNL 777
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDC 110
+ LDLS L E L +L NL DLS L +L L L NL+TLDL C
Sbjct: 778 QTLDLSHCDKLESLPESLGSLQNLYTFDLSSCFELKSLPESLGGLKNLQTLDLTFC 833
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG--ITTIQGLAKLKNLEA 58
L L+ LQ LDLS + S + L +L NL DL C + + L LKNL+
Sbjct: 771 LGGLKNLQTLDLSHCDKLESLPES---LGSLQNLYTFDLSSCFELKSLPESLGGLKNLQT 827
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL 94
LDL+ + L E L +L NLQ L+LSG L +L
Sbjct: 828 LDLTFCHRLKDLPESLESLKNLQTLNLSGCYRLKSL 863
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG--ITTIQGLAKLKNLEA 58
L +L L+ LDLS + S + L +L N++ LDL C + + L L NL+
Sbjct: 651 LGSLNNLRTLDLSGCQKLESLPES---LGSLENIQTLDLSVCDELKSLPECLGSLNNLDT 707
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDC 110
LDLS L + L +L LQ LDLSG L +L L +L L+ + L C
Sbjct: 708 LDLSGCRKLESLPKSLGSLKTLQTLDLSGCGKLESLPESLGSLKTLQRMHLFAC 761
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 23/129 (17%)
Query: 5 RYLQVLDLS----ANYNITSGSLTRL---------------GLANLTNLKKLDLDGC-GI 44
+ L+VLDLS + T G L +L + L+ L L+L+G I
Sbjct: 561 KCLRVLDLSRCSITEFPSTVGQLKQLEVLIAPELQDRQFPDSITRLSRLHYLNLNGSREI 620
Query: 45 TTIQG-LAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPN 101
+ I ++KL++L L L+ + + L +L NL+ LDLSG Q L +L L +L N
Sbjct: 621 SAIPSSVSKLESLVHLYLAYCTSVKVIPDSLGSLNNLRTLDLSGCQKLESLPESLGSLEN 680
Query: 102 LKTLDLRDC 110
++TLDL C
Sbjct: 681 IQTLDLSVC 689
>gi|407917596|gb|EKG10900.1| hypothetical protein MPH_11902 [Macrophomina phaseolina MS6]
Length = 390
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L+NLK L + +T+I GL LKNLE L +S N S EGL + TNL+V+D++
Sbjct: 236 GLDTLSNLKILSIQSNRLTSISGLENLKNLEELHISHNAL--TSTEGLEHSTNLRVIDIT 293
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
GN L+ L NL+ C ++ +++
Sbjct: 294 GNPIEHLTNLSALTNLEEFWASYCKLSDFAEVER 327
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LT L+ L+L I +I+ L L LE L L N ++GL L+NL++L +
Sbjct: 193 LEGLTELRNLELGANRIRSIENLETLTGLEELWLGKNKI--TEIKGLDTLSNLKILSIQS 250
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ + GL NL NL+ L + +T+ +G++ T
Sbjct: 251 NRLTSISGLENLKNLEELHISHNALTSTEGLEHST 285
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LT L++L L IT I+GL L NL+ L + SN S+ GL NL NL+ L +S
Sbjct: 215 LETLTGLEELWLGKNKITEIKGLDTLSNLKILSIQSNRL--TSISGLENLKNLEELHISH 272
Query: 88 NQNLTTLGLANLPNLKTLDL 107
N +T GL + NL+ +D+
Sbjct: 273 NALTSTEGLEHSTNLRVIDI 292
>gi|46447144|ref|YP_008509.1| hypothetical protein pc1510 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400785|emb|CAF24234.1| hypothetical protein pc1510 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 670
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 70/135 (51%), Gaps = 19/135 (14%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNL---KKLDLDGCGITTIQGLAKLKNLE 57
L L L+ LDLS N G L GLA+LT L K LDL C T GLA L++L
Sbjct: 535 LTPLVALKHLDLSWN-----GDLEDAGLAHLTPLVALKYLDLSECYHLTDAGLAHLRSLV 589
Query: 58 AL---DLSSNYYLHGSLEGLANLTNL---QVLDLSGNQNLTTLGLANLPN---LKTLDLR 108
AL DL Y L + G+A+LT L + LDL G NLT GLA+L + L+ L+L
Sbjct: 590 ALKHLDLRGCYQLTDA--GIAHLTPLVALKYLDLKGCPNLTDAGLAHLTSLIALQDLELP 647
Query: 109 DCGITTIQGIQQFTS 123
+C T G+ S
Sbjct: 648 NCQRITDAGLAHLAS 662
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 67/126 (53%), Gaps = 13/126 (10%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLK---NLEALDLSS 63
LQ L+LS N+T L L + L L+ LDLDGC T GLA L L+ L+LS
Sbjct: 466 LQQLNLSYCTNLTDAGLAHL--STLVTLQHLDLDGCYKLTDIGLAHLTPLVTLKYLNLSC 523
Query: 64 NYYLHGSLEGLANLTNL---QVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQG 117
+ L G+ GLA+LT L + LDLS N +L GLA+L LK LDL +C T G
Sbjct: 524 CHNLTGA--GLAHLTPLVALKHLDLSWNGDLEDAGLAHLTPLVALKYLDLSECYHLTDAG 581
Query: 118 IQQFTS 123
+ S
Sbjct: 582 LAHLRS 587
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 63/124 (50%), Gaps = 8/124 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLK---NLE 57
L L LQ LDLS +N+T LT L L L L L C T GLA LK NL+
Sbjct: 312 LTPLVALQYLDLSKCHNLTDAGLTHLTF--LDALNYLGLGECYNLTDTGLAHLKSLINLQ 369
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLP---NLKTLDLRDCGITT 114
L+L++ + L L L L+ L+LS NLT GLA+L NL+ L+L DC T
Sbjct: 370 HLNLNNCNFTDAGLAHLTPLVTLKYLNLSQCYNLTDAGLAHLTPLVNLQQLNLSDCTNLT 429
Query: 115 IQGI 118
G+
Sbjct: 430 DTGL 433
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLA---KLKNLE 57
L L L+ L+LS YN+T L L L NL++L+L C T GLA L L+
Sbjct: 386 LTPLVTLKYLNLSQCYNLTDAGLAHL--TPLVNLQQLNLSDCTNLTDTGLAYLSPLVTLQ 443
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKT---LDLRDCGITT 114
L+L+ + L L L NLQ L+LS NLT GLA+L L T LDL C T
Sbjct: 444 HLNLNVCKLIDAGLAHLTPLVNLQQLNLSYCTNLTDAGLAHLSTLVTLQHLDLDGCYKLT 503
Query: 115 IQGIQQFTS 123
G+ T
Sbjct: 504 DIGLAHLTP 512
>gi|423099414|ref|ZP_17087121.1| repeat protein, partial [Listeria innocua ATCC 33091]
gi|370794180|gb|EHN61968.1| repeat protein, partial [Listeria innocua ATCC 33091]
Length = 456
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 17 NITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
N+++ LT L L L+NL L +G I +QGL+ LKNL LDLS+N + + LA
Sbjct: 187 NVSNNKLTNLDDLQALSNLGVLYANGNQINNLQGLSTLKNLFLLDLSTNQIVDTT--PLA 244
Query: 76 NLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
LTN+Q L LS NQ GL++L NL LD+ I+ I+ + T
Sbjct: 245 GLTNVQTLYLSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLT 291
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 30 NLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
+L + L L GI++I+G+ L NL L LSSN + L LTNL +L LSGN
Sbjct: 69 DLDTINSLTLTSKGISSIEGMNYLTNLGTLILSSNQV--SDISPLKGLTNLTMLQLSGNP 126
Query: 90 NLTTLGLANLPNLKTLDLRDCGITTI 115
L+NL NL+ LD+ D IT I
Sbjct: 127 ISDISALSNLKNLQALDINDAQITDI 152
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 27/139 (19%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L+NL+ LQ LD I +T + L+ LTNLK L L + + G+ L+ L +L
Sbjct: 133 LSNLKNLQALD------INDAQITDITPLSGLTNLKGLGLYNNQLENLSGVNNLQQLRSL 186
Query: 60 DLSSNY----------------YLHGS----LEGLANLTNLQVLDLSGNQNLTTLGLANL 99
++S+N Y +G+ L+GL+ L NL +LDLS NQ + T LA L
Sbjct: 187 NVSNNKLTNLDDLQALSNLGVLYANGNQINNLQGLSTLKNLFLLDLSTNQIVDTTPLAGL 246
Query: 100 PNLKTLDLRDCGITTIQGI 118
N++TL L + I+ + G+
Sbjct: 247 TNVQTLYLSNNQISDVTGL 265
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LTNL L L G I+ I L+ LKNL+ALD+ N + L+ LTNL+ L L
Sbjct: 111 LKGLTNLTMLQLSGNPISDISALSNLKNLQALDI--NDAQITDITPLSGLTNLKGLGLYN 168
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
NQ G+ NL L++L++ + +T + +Q
Sbjct: 169 NQLENLSGVNNLQQLRSLNVSNNKLTNLDDLQ 200
>gi|427735492|ref|YP_007055036.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
7116]
gi|427370533|gb|AFY54489.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
7116]
Length = 344
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L+ LTNL KL LD I+ ++ LA L NL L LS N H ++G+ NLT L+ L+L
Sbjct: 114 PLSKLTNLTKLYLDSNNISQVKELANLINLTELSLSYNQLSH--VKGITNLTKLEYLNLH 171
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
NQ LANL NL L L I +I+ + +
Sbjct: 172 RNQITDIRPLANLTNLIKLQLSSNQIESIKPLSKL 206
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL + + +LS +YN S G+ NLT L+ L+L IT I+ LA L NL L
Sbjct: 137 LANL--INLTELSLSYNQLSHVK---GITNLTKLEYLNLHRNQITDIRPLANLTNLIKLQ 191
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
LSSN S++ L+ L NL L + N+ + NL NLK L++ I+ ++ + +
Sbjct: 192 LSSNQI--ESIKPLSKLNNLTELIVYQNKINEVKEITNLINLKYLNIGKNNISNVKPLWE 249
Query: 121 FT 122
T
Sbjct: 250 LT 251
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA+L+NLK+L L I+ I L +L NL L++ N + ++ LANLTNL L+ +G
Sbjct: 269 LADLSNLKELGLWKNQISDITPLWQLTNLTKLNIQENKII--DIKALANLTNLTYLNAAG 326
Query: 88 N 88
N
Sbjct: 327 N 327
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 54/116 (46%), Gaps = 20/116 (17%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY--------------YLH---- 68
LANLTNL KL L I +I+ L+KL NL L + N YL+
Sbjct: 180 PLANLTNLIKLQLSSNQIESIKPLSKLNNLTELIVYQNKINEVKEITNLINLKYLNIGKN 239
Query: 69 --GSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
+++ L LTNL L ++ N+ LA+L NLK L L I+ I + Q T
Sbjct: 240 NISNVKPLWELTNLIELYINENKISNIETLADLSNLKELGLWKNQISDITPLWQLT 295
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L NL+YL NI +++ + L LTNL +L ++ I+ I+ LA L NL+ L
Sbjct: 228 LINLKYL---------NIGKNNISNVKPLWELTNLIELYINENKISNIETLADLSNLKEL 278
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNL 102
L N + L LTNL L++ N+ + LANL NL
Sbjct: 279 GLWKNQI--SDITPLWQLTNLTKLNIQENKIIDIKALANLTNL 319
>gi|206967913|ref|ZP_03228869.1| LPXTG-motif cell wall anchor domain protein [Bacillus cereus
AH1134]
gi|206736833|gb|EDZ53980.1| LPXTG-motif cell wall anchor domain protein [Bacillus cereus
AH1134]
Length = 1086
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L N++++ L + +IT G L +G LA L +++ L L I+ + L+++K ++ L
Sbjct: 257 LKNIKFISELRQLKSLSITYGELEDIGPLAELEHIEFLTLRNNKISDLSPLSQMKKIKML 316
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQG 117
DL+SNY ++ L + +L+ L ++ NQ N G+ L N+K L L + G+T I+
Sbjct: 317 DLNSNYI--KDIKPLFTVKSLKTLTVANNQISNDNLAGIEQLKNVKNLSLSNNGLTNIEH 374
Query: 118 I 118
I
Sbjct: 375 I 375
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 21/140 (15%)
Query: 1 LANLRYLQVLDLSANYN------ITSGSLTRLGLAN-------------LTNLKKLDLDG 41
L+ ++ +++LDL++NY T SL L +AN L N+K L L
Sbjct: 307 LSQMKKIKMLDLNSNYIKDIKPLFTVKSLKTLTVANNQISNDNLAGIEQLKNVKNLSLSN 366
Query: 42 CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
G+T I+ + +K L LDL+ N ++E L+ L+ +Q L+L N L++L +
Sbjct: 367 NGLTNIEHITSMKKLVELDLAKNEL--ENIEPLSRLSTVQSLNLEENYISDITPLSHLTD 424
Query: 102 LKTLDLRDCGITTIQGIQQF 121
L L L I ++ +Q+
Sbjct: 425 LYDLKLGSNEIRDVRPVQEL 444
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 67/126 (53%), Gaps = 11/126 (8%)
Query: 1 LANLRYLQVLDLSAN--YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L ++ L++L + N NIT GL +TNL+KL L+G G+ I+ ++ LK L
Sbjct: 580 LLQIKKLEILKENGNEIKNIT-------GLEYMTNLEKLTLEGVGLKNIEFISNLKQLNN 632
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
+++S N + L++L NLQ L+L+ N+ L ++ +L +L L + I ++ +
Sbjct: 633 VNVSHNQI--EDITPLSSLENLQWLNLTDNRIKDVTVLGSMLDLLSLKLAENEIRDVRPL 690
Query: 119 QQFTSY 124
Q +
Sbjct: 691 IQLGQW 696
>gi|147789010|emb|CAN62584.1| hypothetical protein VITISV_009732 [Vitis vinifera]
Length = 774
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 10/125 (8%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
+++ L+ ++LS+NY +IT GSL + L L+L I+TI+GL +L L
Sbjct: 535 ISHFSSLRSVNLSSNYIVHITPGSLPK-------GLHILNLSRNKISTIEGLRELTRLRV 587
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
LDLS N + GL+N T ++ L L+GN+ L L L LDL ITT + +
Sbjct: 588 LDLSYNR-ISRIGHGLSNCTLIKELYLAGNKISDVEALHRLLKLTVLDLSFNKITTTKSL 646
Query: 119 QQFTS 123
Q +
Sbjct: 647 GQLVA 651
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L L L+VLDLS N ++R+G L+N T +K+L L G I+ ++ L +L L
Sbjct: 579 LRELTRLRVLDLSYN------RISRIGHGLSNCTLIKELYLAGNKISDVEALHRLLKLTV 632
Query: 59 LDLSSNYYLHGSLEG--LANLTNLQVLDLSGN 88
LDLS N G +AN +L L+L GN
Sbjct: 633 LDLSFNKITTTKSLGQLVANYNSLLALNLLGN 664
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 21/104 (20%)
Query: 39 LDGCGITTIQGLAKLKNLEALDLSSNYYLH---GSL-----------------EGLANLT 78
+ G G+ I ++ +L +++LSSNY +H GSL EGL LT
Sbjct: 524 ISGIGLKVIPTISHFSSLRSVNLSSNYIVHITPGSLPKGLHILNLSRNKISTIEGLRELT 583
Query: 79 NLQVLDLSGNQ-NLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
L+VLDLS N+ + GL+N +K L L I+ ++ + +
Sbjct: 584 RLRVLDLSYNRISRIGHGLSNCTLIKELYLAGNKISDVEALHRL 627
>gi|46447129|ref|YP_008494.1| hypothetical protein pc1495 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400770|emb|CAF24219.1| hypothetical protein pc1495 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 559
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 67/133 (50%), Gaps = 15/133 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLK---KLDLDGCGITTIQGLAKLKNLE 57
L L LQ LDLS N+T GLA+LT LK L+L G G T GL L L
Sbjct: 296 LTPLTALQHLDLSYCKNLTDA-----GLAHLTPLKALQHLNLRGFGKLTDAGLVHLTPLT 350
Query: 58 AL---DLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLAN---LPNLKTLDLRDC 110
AL DLS L L L LT LQ L+LSG +LT GLA L L+ LDL DC
Sbjct: 351 ALQYLDLSWCKNLTDAGLAHLTPLTGLQHLNLSGWYHLTDAGLARLIFLTALQHLDLSDC 410
Query: 111 GITTIQGIQQFTS 123
T G+++ TS
Sbjct: 411 ENLTSAGLERLTS 423
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 63/127 (49%), Gaps = 9/127 (7%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL---D 60
L LQ LDLS N+TS L RL +LT L+ L L C T GL L L AL +
Sbjct: 399 LTALQHLDLSDCENLTSAGLERL--TSLTALQHLGLSYCMNLTDAGLIHLTPLTALQHLN 456
Query: 61 LSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLA---NLPNLKTLDLRDCGITTIQ 116
LS ++L L L LT LQ L+L G +NLT GLA L L+ L+L C T
Sbjct: 457 LSGCFHLTDAGLVHLTPLTALQHLNLGGCENLTDAGLAYLTPLTALQHLNLSRCKHLTEA 516
Query: 117 GIQQFTS 123
G+ S
Sbjct: 517 GLTHLAS 523
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNL---E 57
L L+ LQ L+L +T L L LT L+ LDL C T GLA L L +
Sbjct: 321 LTPLKALQHLNLRGFGKLTDAGLVHL--TPLTALQYLDLSWCKNLTDAGLAHLTPLTGLQ 378
Query: 58 ALDLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
L+LS Y+L L L LT LQ LDLS +NLT+ GL L +L L
Sbjct: 379 HLNLSGWYHLTDAGLARLIFLTALQHLDLSDCENLTSAGLERLTSLTAL 427
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL---DLSS 63
++ L+ S N +T + L + NLK L L C T LA L L AL +LS
Sbjct: 227 IEALNFSNNTYLTDAHFS--ALKDCKNLKVLHLVSCQAITDDRLAHLTPLTALQHLNLSK 284
Query: 64 NYYLHGS-LEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKT---LDLRDCGITTIQGIQ 119
L + L L LT LQ LDLS +NLT GLA+L LK L+LR G T G+
Sbjct: 285 CRKLTDTGLVHLTPLTALQHLDLSYCKNLTDAGLAHLTPLKALQHLNLRGFGKLTDAGLV 344
Query: 120 QFTS 123
T
Sbjct: 345 HLTP 348
>gi|357009527|ref|ZP_09074526.1| RspH10B [Paenibacillus elgii B69]
Length = 1027
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 43/122 (35%), Positives = 56/122 (45%), Gaps = 10/122 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NLRYL LS N L +L T L+ L GI T+ G+ L L LD
Sbjct: 133 LPNLRYLS---LSGNPLQDPQPLWKL-----TRLESLAASSAGIKTVDGIGSLAGLLYLD 184
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
LS N G L +A L +Q L+L Q G+ + L+TLDLRD I I+ +
Sbjct: 185 LSGNPL--GKLGEVAKLAGVQQLELRNTQLADLSGIDAMKELRTLDLRDNKIMDIRALAD 242
Query: 121 FT 122
+
Sbjct: 243 LS 244
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 26 LGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
+GL + LD+ G I+ + ++ LK L LDLS N + LA L NL+ L L
Sbjct: 85 VGLQYSDRMALLDVSGNQISDVYPISGLKQLTYLDLSGNRI--ADVRPLA-LPNLRYLSL 141
Query: 86 SGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
SGN L L L++L GI T+ GI
Sbjct: 142 SGNPLQDPQPLWKLTRLESLAASSAGIKTVDGI 174
>gi|254675136|ref|NP_001157031.1| leucine-rich repeat and IQ domain-containing protein 1 isoform 1
[Mus musculus]
gi|322510045|sp|Q0P5X1.2|LRIQ1_MOUSE RecName: Full=Leucine-rich repeat and IQ domain-containing protein
1
Length = 1673
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA +NL+ L L CG+T++QGL+ L+ +D N+ S E NL NL V+ L+
Sbjct: 827 LAECSNLQILSLRRCGLTSLQGLSHCTRLKYIDAQENHIEAISCE---NLENLSVVLLNN 883
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
N + G NL++L+L IT I G++
Sbjct: 884 NLLTSIHGFDGCTNLQSLELSHNKITRISGLESL 917
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 9/113 (7%)
Query: 7 LQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY 65
LQ L+LS N +TR+ GL +L L++L +D + + +GL + + LD S N+
Sbjct: 898 LQSLELSHN------KITRISGLESLKYLQELTVDHNQLISTKGLCEAPTIVYLDCSHNH 951
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
++G+ N LQ++ L GN L N L+ L L D I++++G+
Sbjct: 952 LT--GIDGIGNCGLLQIIKLQGNYLREPPSLRNHVLLRELHLDDNSISSVEGL 1002
>gi|424834352|ref|ZP_18259063.1| leucine-rich repeat-containing protein [Clostridium sporogenes PA
3679]
gi|365978698|gb|EHN14767.1| leucine-rich repeat-containing protein [Clostridium sporogenes PA
3679]
Length = 1359
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL+ LDL GI+ I L KL+ L L L N + L L NLTNL LDL
Sbjct: 898 LENLTNLRVLDLSRTGISNISILDKLRKLNELYLGDNNITN--LSSLENLTNLVKLDLVE 955
Query: 88 NQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N N+T++ L NL NL+ L L IT + IQ +++
Sbjct: 956 NNNITSIYALRNLINLRYLTL---PITNPKKIQDYSA 989
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 24/123 (19%)
Query: 21 GSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN-----YYLHG--SLEG 73
G LT + +A + K+L++ I +++G+ LKN+ LD+S N YL G SLE
Sbjct: 152 GPLTYMDVAGI---KELNVHNKNIKSLKGIEYLKNITKLDISDNNIKDISYLKGLDSLE- 207
Query: 74 LANLTNLQVLDLSGNQNLTTLGLANLP-------------NLKTLDLRDCGITTIQGIQQ 120
L NL N + D+S N+ L NL NL LDLRD I I+ ++
Sbjct: 208 LLNLYNNSIEDISPINNMEKLKDVNLSKNKVKDISYLKDLNLHHLDLRDNKIENIEVLKN 267
Query: 121 FTS 123
TS
Sbjct: 268 KTS 270
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 20/108 (18%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH--------------------GS 70
L+++ KL+L G GI +QGL ++NL LDLS+N + GS
Sbjct: 593 LSSITKLELSGRGIVDLQGLESMENLTYLDLSNNEISNIDSIKKLVKLKKLVLHKNKIGS 652
Query: 71 LEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
++ + +L L+ LDLS N L L L LDL GI +I +
Sbjct: 653 IKSIESLKYLEELDLSNNLIGDITALGGLSQLTRLDLSRNGIVSINSL 700
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
++L N+K+LD I + G+ + LE L+LS SL L LTNL+ +++S
Sbjct: 352 SDLENIKELDFHNAHIEKLNGIENMTALEKLNLSGTDIKDISL--LKYLTNLREVNISNT 409
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
L N ++ L+L ITT++ I++F
Sbjct: 410 SISDITALENSIYIRYLNLNKTEITTLEVIKKF 442
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ +L+YL+ LDLS N G +T LG L+ L +LDL GI +I L L NL+ L
Sbjct: 656 IESLKYLEELDLSNN---LIGDITALG--GLSQLTRLDLSRNGIVSINSLGGLINLQYLS 710
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDL--SGNQNLTTLGLANLPNLKTLDL 107
L N + E L L NL+ L L SG N + LA NL+ D
Sbjct: 711 LYEN-KISEREESLKKLYNLRELYLKNSGVSNF-DVTLAYYNNLEKKDF 757
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 41/139 (29%)
Query: 6 YLQVLDLSANYNITSGSLTRLGLAN-LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN 64
Y +D + +++ G++++L +++ LTN ++LDG IQ + NL +++L
Sbjct: 791 YKSEVDTITDLDLSEGTISKLNISSKLTNTNVINLDG-----IQYFS---NLHSINLRG- 841
Query: 65 YYLHGSLEGLANLTNLQ---VLDLSGNQ-NLTTL------------------------GL 96
HG LEGL NL ++ LDL G + N T+L L
Sbjct: 842 ---HGKLEGLENLIPIRGLIKLDLQGREINYTSLYYIKYLTSLEYLYLNNMSLTGDLSFL 898
Query: 97 ANLPNLKTLDLRDCGITTI 115
NL NL+ LDL GI+ I
Sbjct: 899 ENLTNLRVLDLSRTGISNI 917
>gi|374294824|ref|YP_005045015.1| Leucine Rich Repeat (LRR)-containing protein,dockerin-like protein
[Clostridium clariflavum DSM 19732]
gi|359824318|gb|AEV67091.1| Leucine Rich Repeat (LRR)-containing protein,dockerin-like protein
[Clostridium clariflavum DSM 19732]
Length = 456
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
NL YL + +S ++I+ LANL NL +LD+ I+ I L L NL L LS
Sbjct: 339 NLDYLSIGLISEPFDISP-------LANLKNLTRLDIFDSDISDISPLKNLTNLTYLSLS 391
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
N + L NLTNL L L N L NL +LK+LD+R I + +++
Sbjct: 392 YNNI--SDISPLENLTNLAYLKLDCNNITDITPLKNLVSLKSLDIRGNNIEDLTPLEKL 448
>gi|405970661|gb|EKC35547.1| Leucine-rich repeat and IQ domain-containing protein 1 [Crassostrea
gigas]
Length = 1240
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L +L L LDLS N SL+ + GL+ +NL+ LDL IT I G L+ L L
Sbjct: 455 LKDLSNLTFLDLSHN------SLSSIHGLSGCSNLRWLDLSKNKITRIGGTESLRRLHTL 508
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLD 106
LS N + S GL + LQ++D+S N T ++N+ +L L+
Sbjct: 509 KLSHNQLI--STTGLNDTPTLQMIDMSSNHLQTVEDVSNIEDLVPLN 553
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 28 LANLTNLKKLDLDGCGITTIQ---GLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLD 84
L +T ++ DL GC I+T+ GL LK + +L+ + ++ L +L+NL LD
Sbjct: 409 LRQVTTVELRDLPGCNISTLGQCWGLKSLK-MSKCNLTVDNFIQ--YVDLKDLSNLTFLD 465
Query: 85 LSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
LS N + GL+ NL+ LDL IT I G +
Sbjct: 466 LSHNSLSSIHGLSGCSNLRWLDLSKNKITRIGGTESL 502
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 34 LKKLDLDGCGITT---IQ--GLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
LK L + C +T IQ L L NL LDLS N S+ GL+ +NL+ LDLS N
Sbjct: 434 LKSLKMSKCNLTVDNFIQYVDLKDLSNLTFLDLSHNSL--SSIHGLSGCSNLRWLDLSKN 491
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
+ G +L L TL L + + G+
Sbjct: 492 KITRIGGTESLRRLHTLKLSHNQLISTTGL 521
>gi|378726386|gb|EHY52845.1| hypothetical protein HMPREF1120_01052 [Exophiala dermatitidis
NIH/UT8656]
Length = 1794
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 2 ANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+L LQ LD+S N L L G ++L +L+ L ++ +T I G+ L L L+
Sbjct: 1354 GHLHNLQYLDVSGN------QLESLEGFSSLVHLRSLKVNNNRVTNIDGILDLNGLLELE 1407
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL 107
LS N + EG + L+ L+ LDLS NQ + L LP L+ LDL
Sbjct: 1408 LSGNDLVTVDFEG-SELSRLKSLDLSHNQLIAARNLDCLPALQELDL 1453
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 34 LKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT 93
L++L + +T + GL + +L LD+ +N + L +L NLQ LD+SGNQ +
Sbjct: 1317 LEELSVHDNQLTQVNGLPQ--SLRVLDIHNN--MLNDLTSWGHLHNLQYLDVSGNQLESL 1372
Query: 94 LGLANLPNLKTLDLRDCGITTIQGI 118
G ++L +L++L + + +T I GI
Sbjct: 1373 EGFSSLVHLRSLKVNNNRVTNIDGI 1397
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSL-EGLANLTNLQVLDLSG 87
+ L+ LK LDL + + L L L+ LDLS N ++ G + ++ L L+G
Sbjct: 1421 SELSRLKSLDLSHNQLIAARNLDCLPALQELDLSHNMLEEFAVPSGGGKVLDVTDLRLAG 1480
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
NQ L+T+ L LP+L LDL I I G+
Sbjct: 1481 NQ-LSTIDLRQLPSLTRLDLDSNSIKDIHGL 1510
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYL 67
+VLD++ + + L+ + L L +L +LDLD I I GL+ NLE L L
Sbjct: 1469 KVLDVT-DLRLAGNQLSTIDLRQLPSLTRLDLDSNSIKDIHGLSLAYNLEVLSLREQRDS 1527
Query: 68 HGSLEGLANLTN-LQVLDLSGN--QNLTTLGLANLP--NLKTLDLRDCGIT 113
L + + N + + LS N QN T L + P NL+ L++ CGI+
Sbjct: 1528 PDILSLVLSTPNECRQIRLSSNHVQN-GTFALPSTPQNNLRELEIAACGIS 1577
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 33 NLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLT 92
+L+ LD+ + + L NL+ LD+S N SLEG ++L +L+ L ++ N+
Sbjct: 1336 SLRVLDIHNNMLNDLTSWGHLHNLQYLDVSGNQL--ESLEGFSSLVHLRSLKVNNNRVTN 1393
Query: 93 TLGLANLPNLKTLDLRDCGITTI 115
G+ +L L L+L + T+
Sbjct: 1394 IDGILDLNGLLELELSGNDLVTV 1416
>gi|189233676|ref|XP_969228.2| PREDICTED: similar to Kv channel interacting protein 2 [Tribolium
castaneum]
Length = 525
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 33 NLKKLDLDGCGITTI--QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
+LK+LDL C I+ I +++ NLE LD+S NY +H + + LTNLQ+LD +GN +
Sbjct: 295 SLKRLDLSLCRISYIGPDSFSQIPNLEVLDVSENYLIHLYIATVEPLTNLQILD-AGNNS 353
Query: 91 LTTLGLA 97
L+ G++
Sbjct: 354 LSCDGVS 360
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDL 61
L L+ LDLS N + LT ++T L++L L G G + + L K+L+ LDL
Sbjct: 245 LSALRTLDLSYN---SVQYLTPAWFRDMTALEELYLRGNGFSKLDSGPLFASKSLKRLDL 301
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCG 111
S + + + + NL+VLD+S N L L +A + L L + D G
Sbjct: 302 SLCRISYIGPDSFSQIPNLEVLDVSENY-LIHLYIATVEPLTNLQILDAG 350
>gi|302141965|emb|CBI19168.3| unnamed protein product [Vitis vinifera]
Length = 612
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 10/125 (8%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
+++ L+ ++LS+NY +IT GSL + L L+L I+TI+GL +L L
Sbjct: 383 ISHFSSLRSVNLSSNYIVHITPGSLPK-------GLHILNLSRNKISTIEGLRELTRLRV 435
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
LDLS N + GL+N T ++ L L+GN+ L L L LDL ITT + +
Sbjct: 436 LDLSYNR-ISRIGHGLSNCTLIKELYLAGNKISDVEALHRLLKLTVLDLSFNKITTTKSL 494
Query: 119 QQFTS 123
Q +
Sbjct: 495 GQLVA 499
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L L L+VLDLS N ++R+G L+N T +K+L L G I+ ++ L +L L
Sbjct: 427 LRELTRLRVLDLSYN------RISRIGHGLSNCTLIKELYLAGNKISDVEALHRLLKLTV 480
Query: 59 LDLSSNYYLHGSLEG--LANLTNLQVLDLSGN 88
LDLS N G +AN +L L+L GN
Sbjct: 481 LDLSFNKITTTKSLGQLVANYNSLLALNLLGN 512
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 21/104 (20%)
Query: 39 LDGCGITTIQGLAKLKNLEALDLSSNYYLH---GSL-----------------EGLANLT 78
+ G G+ I ++ +L +++LSSNY +H GSL EGL LT
Sbjct: 372 ISGIGLKVIPTISHFSSLRSVNLSSNYIVHITPGSLPKGLHILNLSRNKISTIEGLRELT 431
Query: 79 NLQVLDLSGNQ-NLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
L+VLDLS N+ + GL+N +K L L I+ ++ + +
Sbjct: 432 RLRVLDLSYNRISRIGHGLSNCTLIKELYLAGNKISDVEALHRL 475
>gi|224063241|ref|XP_002301057.1| predicted protein [Populus trichocarpa]
gi|222842783|gb|EEE80330.1| predicted protein [Populus trichocarpa]
Length = 541
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 7 LQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN 64
L+ ++LS N+ IT GSL + L L+L I TI+GL +L L LDLS N
Sbjct: 311 LRSVNLSNNFIVQITPGSLPK-------GLHTLNLSRNKINTIEGLRELTRLRVLDLSYN 363
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
+ +GL+N T ++ L L+GN+ GL L L LDL ITT + + Q +
Sbjct: 364 R-ISRIGQGLSNCTIIKELYLAGNKTSDVEGLHRLLKLTVLDLSFNKITTTKALGQLVA 421
>gi|449284137|gb|EMC90718.1| Leucine-rich repeat and coiled-coil domain-containing protein 1
[Columba livia]
Length = 997
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 17 NITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
N+ +TR+ GL++L NL+ LDL I I+GL+ L L L LS N L +EGL
Sbjct: 22 NVHCNHITRIEGLSHLRNLRHLDLSSNQIRRIEGLSSLAQLRTLSLSCN--LITKVEGLE 79
Query: 76 NLTNLQVLDLSGNQNLTTLGLANL----PNLKTLDLRDCGITTIQGIQQ 120
L NL VL+LS N G +L + +DLR + I + Q
Sbjct: 80 KLFNLTVLNLSYNHIHDLSGFLHLHGTNHKISRIDLRSNCVNNIDHLLQ 128
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 55 NLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITT 114
+L L++ N+ +EGL++L NL+ LDLS NQ GL++L L+TL L IT
Sbjct: 17 DLHTLNVHCNHITR--IEGLSHLRNLRHLDLSSNQIRRIEGLSSLAQLRTLSLSCNLITK 74
Query: 115 IQGIQQF 121
++G+++
Sbjct: 75 VEGLEKL 81
>gi|159463218|ref|XP_001689839.1| flagellar associated protein [Chlamydomonas reinhardtii]
gi|158283827|gb|EDP09577.1| flagellar associated protein [Chlamydomonas reinhardtii]
Length = 301
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
Query: 6 YLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSS 63
+ ++ LSA +N L R+G L +LT LK LDL + +++GL + NL L L
Sbjct: 121 FSRLTSLSAAHN----RLERVGEGLTSLTLLKVLDLSHNRLVSVRGLERCANLRELRLGH 176
Query: 64 NYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL 107
N SLE LA L+ LQVLD+S N+ G A L +L+TLD+
Sbjct: 177 NAL--QSLEPLAGLSQLQVLDVSHNRLAQLSGAAGLSSLRTLDV 218
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
LA LR+L +D+S N + L G + TNL+ D + ++ L+ L +
Sbjct: 67 LAALRHLTAVDVSGNKLTQVLDLRLPADGASGPTNLRSADFSRNALDMLRDLSPFSRLTS 126
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL 107
L + N L EGL +LT L+VLDLS N+ ++ GL NL+ L L
Sbjct: 127 LSAAHNR-LERVGEGLTSLTLLKVLDLSHNRLVSVRGLERCANLRELRL 174
>gi|326514578|dbj|BAJ96276.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1083
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 65/123 (52%), Gaps = 12/123 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITT----IQGLAKLKN 55
L NL LQ LDLS NYN + L L L+ L LD+ G +++ Q + L +
Sbjct: 171 LGNLSKLQYLDLSGNYNYGLSYIVDLAWLPRLSLLSHLDMSGVDLSSARDWFQMVNMLPS 230
Query: 56 LEALDLSS---NYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLA---NLPNLKTLDLRD 109
L+ L LS N + GS+ +NLTNL+VLD+S N T+L A NL LK L L D
Sbjct: 231 LKVLHLSDCGLNSTVSGSIPH-SNLTNLEVLDMSENNFHTSLKHAWFWNLTGLKELHLSD 289
Query: 110 CGI 112
G+
Sbjct: 290 SGL 292
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 68/129 (52%), Gaps = 15/129 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI--TTIQGLAKLKNLEA 58
LA L++L+ LDLS +N +G+ + LA+L NL+ L+L G L L L+
Sbjct: 122 LATLQHLRYLDLS--WNDFNGTSIPVFLASLKNLRYLNLSSAGFGGRIPSQLGNLSKLQY 179
Query: 59 LDLSSNY-----YLHGSLEGLANLTNLQVLDLSG---NQNLTTLGLAN-LPNLKTLDLRD 109
LDLS NY Y+ L L L+ L LD+SG + + N LP+LK L L D
Sbjct: 180 LDLSGNYNYGLSYI-VDLAWLPRLSLLSHLDMSGVDLSSARDWFQMVNMLPSLKVLHLSD 238
Query: 110 CGI-TTIQG 117
CG+ +T+ G
Sbjct: 239 CGLNSTVSG 247
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 56/114 (49%), Gaps = 12/114 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLD---GCGITTIQGLAKLKNLE 57
L L+YL + NYN SG+L A+ NLK LDL G+ + A L NLE
Sbjct: 454 LGKLKYLGL-----NYNNLSGALLNEHFASFGNLKVLDLSYNKFSGVLFTEDFASLGNLE 508
Query: 58 ALDLSSNYYLHG-SLEGLANLTNLQVLDLSGNQNLTTL---GLANLPNLKTLDL 107
LDLS N + E +L+NL+ LDLS N+ + L NLK LDL
Sbjct: 509 YLDLSYNNFSDFLCKEHSTSLSNLEHLDLSHNKLKSVFVGGHFTGLLNLKYLDL 562
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 16 YNITSGSLTRLGLANLTNLKKLDL---DGCGITTIQGLAKLKNLEALDLSSNYYLHGSL- 71
YN +G L + A+L L+ LDL + G+ + A L L+ L L+ N L G+L
Sbjct: 414 YNNFNGVLLKEHFASLGKLEALDLGYNNFSGVFFNEHFASLGKLKYLGLNYNN-LSGALL 472
Query: 72 -EGLANLTNLQVLDLSGNQN---LTTLGLANLPNLKTLDL 107
E A+ NL+VLDLS N+ L T A+L NL+ LDL
Sbjct: 473 NEHFASFGNLKVLDLSYNKFSGVLFTEDFASLGNLEYLDL 512
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDG---CGITTIQGLAKLKNLE 57
A+L L+ LDL YN SG A+L LK L L+ G + A NL+
Sbjct: 426 FASLGKLEALDLG--YNNFSGVFFNEHFASLGKLKYLGLNYNNLSGALLNEHFASFGNLK 483
Query: 58 ALDLSSNYYLHGSL--EGLANLTNLQVLDLSGN---QNLTTLGLANLPNLKTLDLRDCGI 112
LDLS N + G L E A+L NL+ LDLS N L +L NL+ LDL +
Sbjct: 484 VLDLSYNKF-SGVLFTEDFASLGNLEYLDLSYNNFSDFLCKEHSTSLSNLEHLDLSHNKL 542
Query: 113 TTIQGIQQFT 122
++ FT
Sbjct: 543 KSVFVGGHFT 552
>gi|410965232|ref|XP_003989154.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and IQ
domain-containing protein 1 [Felis catus]
Length = 1698
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+N + L+ +D+ N+ + + NL NL + L+ +T+ GL N++ L+
Sbjct: 867 LSNCKKLKHIDVQENH------IESINCENLENLCVVLLNKNQLTSFHGLDGCTNIQNLE 920
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
LS N + GL +L NLQ L + NQ ++T GL + P + LD +T ++GI++
Sbjct: 921 LSHNKITR--IGGLESLKNLQQLIVDHNQLISTKGLCDTPTIIYLDCSHNHLTKVEGIEK 978
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA NL+ L L CG+T++ L+ K L+ +D+ N+ + E NL NL V+ L+
Sbjct: 845 LAECPNLQFLSLRRCGLTSLHSLSNCKKLKHIDVQENHIESINCE---NLENLCVVLLNK 901
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
NQ + GL N++ L+L IT I G++
Sbjct: 902 NQLTSFHGLDGCTNIQNLELSHNKITRIGGLESL 935
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 15 NYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEG 73
N ++ +TR+G L +L NL++L +D + + +GL + LD S N+ +EG
Sbjct: 918 NLELSHNKITRIGGLESLKNLQQLIVDHNQLISTKGLCDTPTIIYLDCSHNHLT--KVEG 975
Query: 74 LANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
+ LQ+L L GN L N L+ L L D I+T++ + +
Sbjct: 976 IEKCGLLQILKLQGNYLSELPSLENHVLLRELHLDDNSISTVEALSSY 1023
>gi|225459284|ref|XP_002285786.1| PREDICTED: uncharacterized protein LOC100252301 [Vitis vinifera]
Length = 685
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 10/125 (8%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
+++ L+ ++LS+NY +IT GSL + L L+L I+TI+GL +L L
Sbjct: 446 ISHFSSLRSVNLSSNYIVHITPGSLPK-------GLHILNLSRNKISTIEGLRELTRLRV 498
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
LDLS N + GL+N T ++ L L+GN+ L L L LDL ITT + +
Sbjct: 499 LDLSYNR-ISRIGHGLSNCTLIKELYLAGNKISDVEALHRLLKLTVLDLSFNKITTTKSL 557
Query: 119 QQFTS 123
Q +
Sbjct: 558 GQLVA 562
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L L L+VLDLS N ++R+G L+N T +K+L L G I+ ++ L +L L
Sbjct: 490 LRELTRLRVLDLSYN------RISRIGHGLSNCTLIKELYLAGNKISDVEALHRLLKLTV 543
Query: 59 LDLSSNYYLHGSLEG--LANLTNLQVLDLSGN 88
LDLS N G +AN +L L+L GN
Sbjct: 544 LDLSFNKITTTKSLGQLVANYNSLLALNLLGN 575
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 39 LDGCGITTIQGLAKLKNLEALDLSSNYYLH---GSLEGLANLTNLQVLDLSGNQNLTTLG 95
+ G G+ I ++ +L +++LSSNY +H GSL L +L+LS N+ T G
Sbjct: 435 ISGIGLKVIPTISHFSSLRSVNLSSNYIVHITPGSLP-----KGLHILNLSRNKISTIEG 489
Query: 96 LANLPNLKTLDL 107
L L L+ LDL
Sbjct: 490 LRELTRLRVLDL 501
>gi|222640080|gb|EEE68212.1| hypothetical protein OsJ_26381 [Oryza sativa Japonica Group]
Length = 873
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Query: 3 NLRY--LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT--IQGLAKLKNLEA 58
NLRY + L +N SG L R L NL NL L +D CG++ L+KLKNL A
Sbjct: 83 NLRYSLFKKLQRYVAFNALSGVLPR-ELWNLKNLISLYIDSCGLSGDLPLTLSKLKNLRA 141
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGN--QNLTTLGLANLPNL-KTLDLRDCGIT 113
L S N + + + NL+NL+VL L GN + L+ L L +L LR+C I+
Sbjct: 142 LRASDNDFTGKIPDYIGNLSNLEVLKLQGNKIEGPIPASLSKLVKLNSSLTLRNCNIS 199
>gi|218960535|ref|YP_001740310.1| putative Phosphoprotein phosphatase [Candidatus Cloacamonas
acidaminovorans]
gi|167729192|emb|CAO80103.1| putative Phosphoprotein phosphatase [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 3445
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 52/104 (50%), Gaps = 15/104 (14%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSS 63
L Y Q+ DLS LA LTNL+ LDL G I+ + LA L NL+ L L
Sbjct: 2973 LYYNQISDLSP-------------LAELTNLQYLDLGGNQISDLSPLAGLNNLQELYLYW 3019
Query: 64 NYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL 107
N G L LA LTNLQ LDL NQ LA L NL LDL
Sbjct: 3020 N--QIGDLSPLAGLTNLQELDLYSNQISDLSPLAELTNLWYLDL 3061
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGS-LEGLANLTNLQVLDL 85
G LTNL+ LDLD I+ + LA L NL+ L L YY S L LA LTNLQ LDL
Sbjct: 2939 GAQYLTNLQSLDLDSNQISDLSPLAGLTNLQELYL---YYNQISDLSPLAELTNLQYLDL 2995
Query: 86 SGNQNLTTLGLANLPNLKTLDL 107
GNQ LA L NL+ L L
Sbjct: 2996 GGNQISDLSPLAGLNNLQELYL 3017
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA LTNL++LDL I+ + LA+L NL LDLS N L LA LTNLQ L L
Sbjct: 3028 LAGLTNLQELDLYSNQISDLSPLAELTNLWYLDLSYN--QISDLSPLAGLTNLQDLYLGW 3085
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LA L NL+ L+L I+ + + + T
Sbjct: 3086 NQINYLSPLAGLTNLQVLNLYSNQISDLSPLAELT 3120
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGS-LEGLANLTNLQVLDLS 86
LA LTNL++LDL+ I+ I LA L NL+ L L YY S L L+ LTNLQ L L
Sbjct: 2397 LAGLTNLQELDLNNNQISNINPLAGLTNLQKLYL---YYNQISDLSPLSGLTNLQYLLLE 2453
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LA L NL+ LDL I+ + + + T
Sbjct: 2454 YNQISNISPLAGLTNLQVLDLYSNQISDLSPLAELT 2489
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA LTNL+ L L I+ I LA L NL+ LDL SN + L LA LTNLQ L L
Sbjct: 1161 LAGLTNLQNLILAYNQISDISPLAGLTNLQVLDLYSNQISY--LSPLAGLTNLQELYLHS 1218
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGIT 113
NQ LA + NL+ ++L++ I+
Sbjct: 1219 NQISDLSPLAGMTNLRVINLKNNQIS 1244
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LA L LQ LDL +N I+ S LA LTNL LDL I+ + LA L NL+ L
Sbjct: 3028 LAGLTNLQELDLYSN-QISDLS----PLAELTNLWYLDLSYNQISDLSPLAGLTNLQDLY 3082
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL 107
L N + L LA LTNLQVL+L NQ LA L NL+ L L
Sbjct: 3083 LGWNQINY--LSPLAGLTNLQVLNLYSNQISDLSPLAELTNLQYLHL 3127
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 37 LDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGL 96
L DG I +I+G L NL++LDL SN L LA LTNLQ L L NQ L
Sbjct: 2927 LHADGRNIISIEGAQYLTNLQSLDLDSN--QISDLSPLAGLTNLQELYLYYNQISDLSPL 2984
Query: 97 ANLPNLKTLDL 107
A L NL+ LDL
Sbjct: 2985 AELTNLQYLDL 2995
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G LTNL+ LDLD I+ + LA L NL L L N + L LA LTNLQ LDL
Sbjct: 2308 GAQYLTNLQSLDLDSNQISDLSPLAGLTNLLELYLLDN--MINYLSPLAGLTNLQYLDLG 2365
Query: 87 GNQNLTTLGLANLPNLKTLDL 107
GNQ LA L NL+ L L
Sbjct: 2366 GNQISDLSPLAGLTNLQDLYL 2386
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 13/102 (12%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL+YL +L+ + NI+ LA LTNL+ LDL I+ + LA+L NL LD
Sbjct: 2444 LTNLQYL-LLEYNQISNISP-------LAGLTNLQVLDLYSNQISDLSPLAELTNLWYLD 2495
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANL 99
LS N L L L NLQ L L NQ +L+ L GL NL
Sbjct: 2496 LSYN--QISDLSPLVGLVNLQGLWLDNNQINDLSPLIGLTNL 2535
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH-GSLEGLANLTNLQV 82
LA LTNLK L+L I+ I LA L N+ L L NY + LEGL NL NLQ+
Sbjct: 1722 LAGLTNLKGLNLGSNQISDINPLAGLTNISWLFLFGNYISNIAPLEGLYNLRNLQL 1777
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGS-LEGLANLTNLQVLDLS 86
LA LTNL+ L+L I+ + LA+L NL+ L L YY S L L LTNL L L+
Sbjct: 3094 LAGLTNLQVLNLYSNQISDLSPLAELTNLQYLHL---YYNQISDLSPLTGLTNLHYLYLA 3150
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L L NL+ L L I+ I + + T
Sbjct: 3151 YNQISDLSPLIGLTNLQYLHLYYNQISDISPLAELT 3186
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 43/93 (46%), Gaps = 20/93 (21%)
Query: 1 LANLRYL-----QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKN 55
L NL YL Q+ DLS L LTNL+ L L I+ I LA+L N
Sbjct: 3141 LTNLHYLYLAYNQISDLSP-------------LIGLTNLQYLHLYYNQISDISPLAELTN 3187
Query: 56 LEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
L+ L L SN L LA LTNL L L GN
Sbjct: 3188 LQYLWLDSN--QISDLSPLAGLTNLWWLWLDGN 3218
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 60/130 (46%), Gaps = 19/130 (14%)
Query: 1 LANLRYLQVLDLSAN---YNITSGSLTRL--------------GLANLTNLKKLDLDGCG 43
LA L LQVLDL +N Y LT L LA +TNL+ ++L
Sbjct: 1183 LAGLTNLQVLDLYSNQISYLSPLAGLTNLQELYLHSNQISDLSPLAGMTNLRVINLKNNQ 1242
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
I+ + LA L NL+ L L N + LA LTNL L+LS NQ LA L NL
Sbjct: 1243 ISDLSPLAGLTNLQYLLLGWN--KINDISPLAGLTNLWSLNLSYNQISDLSPLAGLTNLW 1300
Query: 104 TLDLRDCGIT 113
L L + I+
Sbjct: 1301 YLYLDNNPIS 1310
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LA L LQVL+L +N I+ S LA LTNL+ L L I+ + L L NL L
Sbjct: 3094 LAGLTNLQVLNLYSN-QISDLS----PLAELTNLQYLHLYYNQISDLSPLTGLTNLHYLY 3148
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL 107
L+ N L L LTNLQ L L NQ LA L NL+ L L
Sbjct: 3149 LAYN--QISDLSPLIGLTNLQYLHLYYNQISDISPLAELTNLQYLWL 3193
>gi|219853699|ref|YP_002470821.1| hypothetical protein CKR_0356 [Clostridium kluyveri NBRC 12016]
gi|219567423|dbj|BAH05407.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 472
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY-LHGSLEGLANLTNLQVLDL 85
G+ NLTNLK L+L I L L L L+LS NY+ L+ + L NL NL+ LDL
Sbjct: 200 GIENLTNLKSLNLTFSYAVDISPLKDLTKLHYLNLSRNYFILNKDISSLKNLVNLERLDL 259
Query: 86 S--GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
S G ++LT L N+ NL+ L+L IT + I+
Sbjct: 260 SSDGIEDLTP--LKNMKNLRVLNLYSNEITDLNPIK 293
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L +L L L+LS NY I + ++ L NL NL++LDL GI + L +KNL L+
Sbjct: 223 LKDLTKLHYLNLSRNYFILNKDIS--SLKNLVNLERLDLSSDGIEDLTPLKNMKNLRVLN 280
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSG 87
L SN L + +L L+ ++LSG
Sbjct: 281 LYSNEI--TDLNPIKDLNQLKEINLSG 305
>gi|395513432|ref|XP_003760928.1| PREDICTED: uncharacterized protein LOC100920101 [Sarcophilus
harrisii]
Length = 379
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLT-NLQVLDLSG 87
+ NL+ L + + ++ L KL L L+LS N+ + G LE LA T +L L+LSG
Sbjct: 143 SEFENLEFLSMVDISLVSLANLPKLPRLRKLELSDNH-ISGGLEVLAERTPSLVQLNLSG 201
Query: 88 NQ--NLTTLG-LANLPNLKTLDLRDCGITTIQGIQQ 120
N+ ++ TL L LPNLK+LDL C +T + ++
Sbjct: 202 NKIKDINTLEPLKKLPNLKSLDLFKCDVTMLMSYRE 237
>gi|427725690|ref|YP_007072967.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
gi|427357410|gb|AFY40133.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
Length = 918
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG-LAKLKNLEAL 59
+A L+ LQ LDLS N + + G+ L NL+KL L I I +A L+N++ L
Sbjct: 127 IAELKNLQQLDLSNN---KIKEIPK-GITELNNLQKLCLSNNKIKEIPVVIASLRNIQQL 182
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ-NLTTLGLANLPNLKTLDLRD 109
L++N + S +A L LQVLD+ GNQ + L +LPNL TL +RD
Sbjct: 183 YLNNNEIMRIS-PVIAQLPKLQVLDIRGNQIKIIPKFLCDLPNLNTLIIRD 232
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ NL+ LQ LDLS N + + L NLKKL++ I + +A+LKNL+ L
Sbjct: 81 ITNLKNLQQLDLSDNQTLEIPE----TITKLRNLKKLNISNNQIRYLSHTIAELKNLQQL 136
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ-NLTTLGLANLPNLKTLDLRDCGITTIQGI 118
DLS+N + +G+ L NLQ L LS N+ + +A+L N++ L L + I I +
Sbjct: 137 DLSNN-KIKEIPKGITELNNLQKLCLSNNKIKEIPVVIASLRNIQQLYLNNNEIMRISPV 195
>gi|383850206|ref|XP_003700688.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like
[Megachile rotundata]
Length = 315
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L LT L +L+L I I+ L L NLE LDLS N +EGL NL+NLQ L LS
Sbjct: 71 NLDTLTTLVELELRDNQIVVIENLDALVNLELLDLSFNRI--KKIEGLENLSNLQKLFLS 128
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTI---QGIQQFTS 123
N+ L++L NL TL+L D I I +G+ TS
Sbjct: 129 SNKIQCIENLSHLKNLTTLELGDNKIRDIVNLEGLDNLTS 168
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 35/137 (25%)
Query: 7 LQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY 65
L++LDLS N + ++ GL NL+NL+KL L I I+ L+ LKNL L+L N
Sbjct: 100 LELLDLSFN------RIKKIEGLENLSNLQKLFLSSNKIQCIENLSHLKNLTTLELGDNK 153
Query: 66 YLH-GSLEGLANLTNLQVLDLSGNQNLTTL--------------------GLANLPNLKT 104
+LEGL NLT+L G +T + + NL LK
Sbjct: 154 IRDIVNLEGLDNLTSL----FLGKNKITKIDNLGCLQNLQLLSLQSNRITKIENLEELKK 209
Query: 105 LD---LRDCGITTIQGI 118
LD L + GIT I+G+
Sbjct: 210 LDQLYLSENGITCIEGL 226
>gi|358367484|dbj|GAA84103.1| conserved leucine-rich repeat protein [Aspergillus kawachii IFO 4308]
Length = 1865
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 2 ANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+L LQ LD+S N L L G ++L +L++L + IT I+G+ L L +L
Sbjct: 1413 GHLTNLQYLDVSGN------ELESLDGFSSLIHLRELKANDNNITNIEGIFDLDGLLSLQ 1466
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLR 108
L +N L G A LT L LDLS NQ + + +LP+L LDLR
Sbjct: 1467 LRNNG-LTAVDFGRAELTRLHDLDLSHNQLSSIRNIDSLPSLSALDLR 1513
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 34 LKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT 93
L++LD+ G I + G+ +L L++ N +L +LTNLQ LD+SGN+ +
Sbjct: 1376 LEELDVTGNDIGQLGGVPP--SLRTLNIQDNCL--SNLTAWGHLTNLQYLDVSGNELESL 1431
Query: 94 LGLANLPNLKTLDLRDCGITTIQGI 118
G ++L +L+ L D IT I+GI
Sbjct: 1432 DGFSSLIHLRELKANDNNITNIEGI 1456
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 26 LGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
G A LT L LDL +++I+ + L +L ALDL N L G LE A+L +LQ L L
Sbjct: 1477 FGRAELTRLHDLDLSHNQLSSIRNIDSLPSLSALDLRFN-QLDG-LETTASLPSLQSLKL 1534
Query: 86 SGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
S N L TL + P+L L + + ++ G+ +
Sbjct: 1535 S-NNILRTLDVGAFPSLHLLYVDQNFLRSVSGLDK 1568
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 33 NLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLT 92
+L+ L++ ++ + L NL+ LD+S N SL+G ++L +L+ L + N
Sbjct: 1395 SLRTLNIQDNCLSNLTAWGHLTNLQYLDVSGNEL--ESLDGFSSLIHLRELKANDNNITN 1452
Query: 93 TLGLANLPNLKTLDLRDCGITTI 115
G+ +L L +L LR+ G+T +
Sbjct: 1453 IEGIFDLDGLLSLQLRNNGLTAV 1475
>gi|392594656|gb|EIW83980.1| L domain-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 360
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L +L NL++L L IT +Q L+ LK+L+ L + SN +EGL L+NLQ L LS
Sbjct: 200 LDSLVNLEELWLGKNKITKLQNLSSLKSLKILSIQSNRI--KKIEGLDGLSNLQELYLSH 257
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N GL N P L+TLD+ + I I+ + TS
Sbjct: 258 NGVERLEGLDNNPQLRTLDVGNNFIPEIENVSHLTS 293
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 6/120 (5%)
Query: 4 LRYLQVLDLSANYN---ITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+R+++ LD N + +T+L L++L +LK L + I I+GL L NL+ L
Sbjct: 194 IRFIENLDSLVNLEELWLGKNKITKLQNLSSLKSLKILSIQSNRIKKIEGLDGLSNLQEL 253
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
LS N LEGL N L+ LD+ N +++L +L+ L L + I ++Q ++
Sbjct: 254 YLSHNGV--ERLEGLDNNPQLRTLDVGNNFIPEIENVSHLTSLEELWLNNNKIDSLQALE 311
>gi|387818177|ref|YP_005678522.1| internalin A (LPXTG motif) [Clostridium botulinum H04402 065]
gi|322806219|emb|CBZ03787.1| internalin A (LPXTG motif) [Clostridium botulinum H04402 065]
Length = 332
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
++ L NL+ L++ C + + + LKNL+ LD+S+N +L GL NLTNL+ L +
Sbjct: 142 ISTLKNLENLEIIDCKLNDVSIVKNLKNLKRLDISNNEI--NNLNGLENLTNLKELYMPN 199
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N + NL NL LD+ D IT+I+ ++ S
Sbjct: 200 NNIADLKPIRNLLNLTNLDISDNKITSIKELKNMKS 235
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL L+++D N S+ + NL NLK+LD+ I + GL L NL+ L
Sbjct: 145 LKNLENLEIIDCKLN----DVSIVK----NLKNLKRLDISNNEINNLNGLENLTNLKELY 196
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ +N L+ + NL NL LD+S N+ + L N+ ++K L++ + ++ ++GI+
Sbjct: 197 MPNNNI--ADLKPIRNLLNLTNLDISDNKITSIKELKNMKSIKELNICNNNLSNLEGIEN 254
Query: 121 FT 122
+
Sbjct: 255 MS 256
>gi|255587333|ref|XP_002534233.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis]
gi|223525672|gb|EEF28156.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis]
Length = 477
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 6/92 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDG---CGITTIQGLAKLKNLE 57
L+ L L++LDLS N N + L+ +N T+LK L +D G ++ L KL NLE
Sbjct: 85 LSTLENLEILDLSIN-NFNNSVLS--SFSNFTSLKSLYIDSNKLKGTLNVEELLKLNNLE 141
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
LDLS N++ +G L L L++L+ LD+S NQ
Sbjct: 142 YLDLSFNHFDNGVLSFLKGLSSLKTLDISYNQ 173
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 28 LANLTNLKKLDLDGCGITTI----QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVL 83
+ LT+LK L L CG+T+ QGL +LK L+ LD+S N +E + L++L
Sbjct: 232 IGTLTSLKALSLPKCGLTSTIPSTQGLCELKYLKGLDISFNSLSETEVEDMIPKFQLKML 291
Query: 84 DLSGN 88
L G+
Sbjct: 292 YLPGD 296
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 22/127 (17%)
Query: 1 LANLRYLQVLDLSAN----------------YNITSGSLTRLGLA--NLTNLKKLDLDGC 42
LANL LQ LDLS+N Y S ++ ++ ++ NL KL L
Sbjct: 22 LANLTSLQQLDLSSNHFNGSLSPLSSLTSIYYLYLSDNMFQIPISLNPFVNLSKLIL--- 78
Query: 43 GITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNL 102
+ L+ L+NLE LDLS N + + L +N T+L+ L + N+ TL + L L
Sbjct: 79 -FYGFERLSTLENLEILDLSINNFNNSVLSSFSNFTSLKSLYIDSNKLKGTLNVEELLKL 137
Query: 103 KTLDLRD 109
L+ D
Sbjct: 138 NNLEYLD 144
>gi|16799449|ref|NP_469717.1| cell surface protein [Listeria innocua Clip11262]
gi|16412801|emb|CAC95605.1| probable cell surface protein (LPXTG motif) [Listeria innocua
Clip11262]
Length = 656
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 17 NITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
N+++ LT L L L+NL L +G I +QGL+ LKNL LDLS+N + + LA
Sbjct: 187 NVSNNKLTNLDELQALSNLGVLYANGNQINNLQGLSTLKNLFLLDLSTNQIVDTT--PLA 244
Query: 76 NLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
LTN+Q L LS NQ GL++L NL LD+ I+ I+ + T
Sbjct: 245 GLTNVQTLYLSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLT 291
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 30 NLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
+L + L L GI++I+G+ L NL L LSSN + L LTNL +L LSGN
Sbjct: 69 DLDTINSLTLTSKGISSIEGMNYLTNLGTLILSSNQV--SDISPLKGLTNLTMLQLSGNP 126
Query: 90 NLTTLGLANLPNLKTLDLRDCGITTI 115
L+NL NL+ LD+ D IT I
Sbjct: 127 ISDISALSNLKNLQALDINDAQITDI 152
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 27/139 (19%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L+NL+ LQ LD I +T + L+ LTNLK L L + + G+ L+ L +L
Sbjct: 133 LSNLKNLQALD------INDAQITDITPLSGLTNLKGLGLYNNQLENLSGVNNLQQLRSL 186
Query: 60 DLSSNY----------------YLHGS----LEGLANLTNLQVLDLSGNQNLTTLGLANL 99
++S+N Y +G+ L+GL+ L NL +LDLS NQ + T LA L
Sbjct: 187 NVSNNKLTNLDELQALSNLGVLYANGNQINNLQGLSTLKNLFLLDLSTNQIVDTTPLAGL 246
Query: 100 PNLKTLDLRDCGITTIQGI 118
N++TL L + I+ + G+
Sbjct: 247 TNVQTLYLSNNQISDVTGL 265
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LTNL L L G I+ I L+ LKNL+ALD+ N + L+ LTNL+ L L
Sbjct: 111 LKGLTNLTMLQLSGNPISDISALSNLKNLQALDI--NDAQITDITPLSGLTNLKGLGLYN 168
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
NQ G+ NL L++L++ + +T + +Q
Sbjct: 169 NQLENLSGVNNLQQLRSLNVSNNKLTNLDELQ 200
>gi|55741912|ref|NP_998442.1| acidic leucine-rich nuclear phosphoprotein 32 family member E
[Danio rerio]
gi|82237209|sp|Q6NUW5.1|AN32E_DANRE RecName: Full=Acidic leucine-rich nuclear phosphoprotein 32 family
member E
gi|33991732|gb|AAH56543.1| Acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
[Danio rerio]
gi|46250384|gb|AAH68403.1| Acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
[Danio rerio]
gi|68534775|gb|AAH98881.1| Acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
[Danio rerio]
Length = 250
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 30 NLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN-LTNLQVLDLSGN 88
+ L+ L + G+T++ L L L L+LS N + G+LE LA NL L+LSGN
Sbjct: 40 DFKELEFLSMVNVGLTSLAKLPSLPKLRKLELSDNN-ISGTLETLAEKCANLTYLNLSGN 98
Query: 89 Q--NLTTL-GLANLPNLKTLDLRDCGITTIQGIQQ 120
+ L+TL L NL NLK+LDL +C ITT++ ++
Sbjct: 99 KIKELSTLEALQNLKNLKSLDLFNCEITTLEDYRE 133
>gi|298706720|emb|CBJ29669.1| LRR-GTPase of the ROCO family [Ectocarpus siliculosus]
Length = 1282
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 47/111 (42%), Positives = 65/111 (58%), Gaps = 7/111 (6%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNLEALDLSSNY 65
+V++LS N GS+ + L LTNLK L LD +T T + LA L NL++L L +
Sbjct: 46 RVVELSLPKNNLRGSIPK-ELGTLTNLKSLCLDSNRLTGSTPKELAALTNLKSLSLHT-I 103
Query: 66 YLHGSL-EGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGIT 113
+L GS+ + LA LTNL+ LDL NQ ++ L L NLK+L L D +T
Sbjct: 104 HLTGSIPKELAALTNLKELDLGFNQLTGSIPKELGALTNLKSLFLGDNQLT 154
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 48/112 (42%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNLEA 58
L L L+ L L +N +GS T LA LTNLK L L +T + LA L NL+
Sbjct: 65 LGTLTNLKSLCLDSNR--LTGS-TPKELAALTNLKSLSLHTIHLTGSIPKELAALTNLKE 121
Query: 59 LDLSSNYYLHGSL-EGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDL 107
LDL N L GS+ + L LTNL+ L L NQ T+ L L NLK L+L
Sbjct: 122 LDLGFN-QLTGSIPKELGALTNLKSLFLGDNQLTGTIPTELGALTNLKFLNL 172
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TI-QGLAKLKNLEA 58
LA L L+ LDL +N +GS+ + L LTNLK L L +T TI L L NL+
Sbjct: 113 LAALTNLKELDLG--FNQLTGSIPK-ELGALTNLKSLFLGDNQLTGTIPTELGALTNLKF 169
Query: 59 LDLSSNYYLHGSL-EGLANLTNLQVLDLSGNQ 89
L+L N L GS+ + LA LTNL L LS NQ
Sbjct: 170 LNLMKNQ-LTGSIPKELAALTNLAWLGLSNNQ 200
>gi|28210262|ref|NP_781206.1| cwp66 homolog/N-acetylmuramoyl-L-alanine amidase [Clostridium
tetani E88]
gi|28202698|gb|AAO35143.1| cwp66-like protein/N-acetylmuramoyl-L-alanine amidase [Clostridium
tetani E88]
Length = 871
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
+L YL LDLS N NI G L+ L++L NL L L GI+++ L LK L LDL+
Sbjct: 502 DLTYLYYLDLSHNNNI--GGLS--DLSDLKNLTTLKLSNTGISSLGFLEDLKRLTELDLA 557
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N +L+ L L NL+ L L+ N L +L +L+ L++ I ++ ++F
Sbjct: 558 KNSI--SNLDSLKKLDNLKTLYLNDNNISYIEDLKDLKDLEELNVWGNNIKDVEKFKKFK 615
Query: 123 S 123
+
Sbjct: 616 T 616
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 47 IQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTL 105
+ L KL+ L+ L+L N + +E +LT L LDLS N N+ L L++L NL TL
Sbjct: 475 VDSLKKLEYLKYLNLGKNDISY--IEDFKDLTYLYYLDLSHNNNIGGLSDLSDLKNLTTL 532
Query: 106 DLRDCGITTI 115
L + GI+++
Sbjct: 533 KLSNTGISSL 542
>gi|46447549|ref|YP_008914.1| hypothetical protein pc1915 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401190|emb|CAF24639.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 683
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L N + L+VL L N+T L L LT L+ L+L C T GLA L L AL
Sbjct: 245 LKNCKNLKVLYLQGCRNLTDAGLAHL--TPLTGLQHLNLSWCRNLTDAGLAHLAPLTALQ 302
Query: 60 --DLSSNYYLHGS-LEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
DLS L + L L LT LQ LDL +N+T GLA+L L+ LDL DCG
Sbjct: 303 YLDLSHCRNLTDTGLAHLTPLTALQHLDLRVCKNITDAGLAHLAPLTALQNLDLSDCGHL 362
Query: 114 TIQGIQQFTS 123
T G+ T
Sbjct: 363 TDAGLAYLTP 372
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L LQ LDL NIT L L A LT L+ LDL CG T GLA L L AL
Sbjct: 320 LTPLTALQHLDLRVCKNITDAGLAHL--APLTALQNLDLSDCGHLTDAGLAYLTPLTALQ 377
Query: 61 LSSNYYLH----GSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
+ Y+ L L LT LQ L LS NLT GLA+L L+ L+L C
Sbjct: 378 HLNLYFCFNLTDAGLVHLRPLTALQTLGLSQCWNLTDTGLAHLTPLTALQHLNLSRCYKL 437
Query: 114 TIQGIQQFTS 123
T G+ T
Sbjct: 438 TDAGLAHLTP 447
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 62/124 (50%), Gaps = 9/124 (7%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNL---EALDLSS 63
++ ++ S N ++T L L L N NLK L L GC T GLA L L + L+LS
Sbjct: 226 IERVNFSENAHLTDAHL--LVLKNCKNLKVLYLQGCRNLTDAGLAHLTPLTGLQHLNLSW 283
Query: 64 NYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQGIQ 119
L L LA LT LQ LDLS +NLT GLA+L L+ LDLR C T G+
Sbjct: 284 CRNLTDAGLAHLAPLTALQYLDLSHCRNLTDTGLAHLTPLTALQHLDLRVCKNITDAGLA 343
Query: 120 QFTS 123
Sbjct: 344 HLAP 347
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L LQ L+LS Y +T L RL LT L+ LDL C T GLA+L L L
Sbjct: 495 LTPLTALQHLNLSRCYKLTDAGLARL--TPLTALQHLDLKYCINLTDAGLARLTPLSGLQ 552
Query: 61 ----LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
+ Y L L LT LQ L L+ +NLT +GLA+L L+ LDL +C
Sbjct: 553 HLALTNCKYLTDAGLAHLTLLTALQYLALANCKNLTDVGLAHLTPLTALQHLDLSECRHL 612
Query: 114 TIQGIQQFTS 123
T G+ T
Sbjct: 613 TDAGLAHLTP 622
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L L LQ L+L +N+T L L LT L+ L L C T GLA L L AL
Sbjct: 370 LTPLTALQHLNLYFCFNLTDAGLVHL--RPLTALQTLGLSQCWNLTDTGLAHLTPLTALQ 427
Query: 60 --DLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLD---LRDCGIT 113
+LS Y L L L LT LQ L+LS +NLT GLA+L L L L C
Sbjct: 428 HLNLSRCYKLTDAGLAHLTPLTALQHLNLSYCENLTDDGLAHLAPLTALQYLRLSQCWKL 487
Query: 114 TIQGIQQFTS 123
T G+ T
Sbjct: 488 TDAGLAHLTP 497
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 65/153 (42%), Gaps = 30/153 (19%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL----GLANL--TNLKKLD---------------- 38
L L LQ LDL N+T L RL GL +L TN K L
Sbjct: 520 LTPLTALQHLDLKYCINLTDAGLARLTPLSGLQHLALTNCKYLTDAGLAHLTLLTALQYL 579
Query: 39 -LDGCGITTIQGLAKLKNLEAL---DLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTT 93
L C T GLA L L AL DLS +L L L LT LQ L+LS +NLT
Sbjct: 580 ALANCKNLTDVGLAHLTPLTALQHLDLSECRHLTDAGLAHLTPLTGLQHLNLSWCRNLTD 639
Query: 94 LGLANLPNLKTLD---LRDCGITTIQGIQQFTS 123
GLA+L L L L C T G+ +F +
Sbjct: 640 AGLAHLSPLSVLQHLALSQCSRLTDDGLDRFKT 672
>gi|326427599|gb|EGD73169.1| hypothetical protein PTSG_04882 [Salpingoeca sp. ATCC 50818]
Length = 354
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L +L NL L+L I I+GL L NL L L N H S GL NL NL+VL L
Sbjct: 176 LNHLANLTMLELGANRIREIEGLDALVNLRQLFLGKNKITHIS--GLDNLMNLRVLSLQS 233
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
N+ GL NL +L+ L L GIT I+G+
Sbjct: 234 NRIEKIEGLENLKHLEELYLSHNGITVIEGL 264
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L NL++L L IT I GL L NL L L SN +EGL NL +L+ L LS
Sbjct: 197 GLDALVNLRQLFLGKNKITHISGLDNLMNLRVLSLQSNRI--EKIEGLENLKHLEELYLS 254
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N GL + L LD+ I + G+ T+
Sbjct: 255 HNGITVIEGLDHQLELSVLDVSANRIEHLSGVSHLTA 291
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
+L L+ LD+S N G ++ L L+KL L I I+ L L NL L+L
Sbjct: 134 HLTELKALDVSYN-----GIRKIKHISQLVKLEKLFLANNKIKAIEHLNHLANLTMLELG 188
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
+N +EGL L NL+ L L N+ GL NL NL+ L L+ I I+G++
Sbjct: 189 ANRI--REIEGLDALVNLRQLFLGKNKITHISGLDNLMNLRVLSLQSNRIEKIEGLE 243
>gi|345561165|gb|EGX44262.1| hypothetical protein AOL_s00193g174 [Arthrobotrys oligospora ATCC
24927]
Length = 349
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLT L++L L I+ I+ ++ L NL+ L L SN L GL L NL+ L +S
Sbjct: 189 LENLTKLEELWLGKNKISEIKNVSMLSNLKILSLPSNRL--TKLSGLDGLNNLEELYVSH 246
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N GL N PN+K LD+ +T+I+GI+ +
Sbjct: 247 NAIEDLSGLENTPNIKNLDVTHNRLTSIKGIEHLS 281
>gi|168016442|ref|XP_001760758.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688118|gb|EDQ74497.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 377
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 71/141 (50%), Gaps = 33/141 (23%)
Query: 1 LANLRYLQVLDLSANYNITS--------GSLTRLGL-------------ANLTNLKKLDL 39
LANL L +L LS ++TS SLTR L NL++L+ LDL
Sbjct: 198 LANLTSLTILILSGCSSLTSLVNELANLSSLTRFSLRGCSSLKSLPNELTNLSSLRILDL 257
Query: 40 DGCGITTIQGLA-KLKNLEALDLSSNYYLHG-----SLEG-LANLTNLQVLDLSGNQNLT 92
C + + L +L NL +L + LHG SL LA L++L +L+LSG NLT
Sbjct: 258 SCCSCSGLTSLPNELVNLSSLTI---LILHGCSSLISLPNELAKLSSLTILNLSGCLNLT 314
Query: 93 TLG--LANLPNLKTLDLRDCG 111
+L LANL +L LDL DC
Sbjct: 315 SLPNELANLSSLVVLDLSDCS 335
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 61/115 (53%), Gaps = 7/115 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQG-LAKLKNLEA 58
L NL L +LDLS N+ S L +L++ ++LDL GC +T++ L +L
Sbjct: 126 LPNLSSLTILDLSGFSNLIS---LPNELTSLSSFEELDLSGCLSLTSLPNELTNHTSLTT 182
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCG 111
L LS L LANLT+L +L LSG +LT+L LANL +L LR C
Sbjct: 183 LILSGCSSLTSLPNELANLTSLTILILSGCSSLTSLVNELANLSSLTRFSLRGCS 237
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCG--ITTIQGLAKLKNL 56
L NL L++LDLS + LT L L NL++L L L GC I+ LAKL +L
Sbjct: 246 LTNLSSLRILDLSC---CSCSGLTSLPNELVNLSSLTILILHGCSSLISLPNELAKLSSL 302
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG 95
L+LS L LANL++L VLDLS +LT+L
Sbjct: 303 TILNLSGCLNLTSLPNELANLSSLVVLDLSDCSSLTSLP 341
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 21 GSLTRL--GLANLTNLKKLDLDGCG--ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
S+TRL L NL++L LDL G I+ L L + E LDLS L L N
Sbjct: 117 SSITRLRNELPNLSSLTILDLSGFSNLISLPNELTSLSSFEELDLSGCLSLTSLPNELTN 176
Query: 77 LTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCG 111
T+L L LSG +LT+L LANL +L L L C
Sbjct: 177 HTSLTTLILSGCSSLTSLPNELANLTSLTILILSGCS 213
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 21 GSLTRLG--LANLTNLKKLDLDGCGITT--IQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
SLT L LANLT+L L L GC T + LA L +L L L L N
Sbjct: 189 SSLTSLPNELANLTSLTILILSGCSSLTSLVNELANLSSLTRFSLRGCSSLKSLPNELTN 248
Query: 77 LTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
L++L++LDLS + GL +LPN + ++L I + G S
Sbjct: 249 LSSLRILDLSC---CSCSGLTSLPN-ELVNLSSLTILILHGCSSLIS 291
>gi|418668210|ref|ZP_13229613.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410756067|gb|EKR17694.1| leucine rich repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
Length = 379
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 7/103 (6%)
Query: 18 ITSGSLTRLG--LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGL 74
+ S LT L + L NL+ L+L +TT+ + + +L+NL++LDL SN L +G+
Sbjct: 239 LVSNQLTILPNEIRQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQ-LTTFPKGI 297
Query: 75 ANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGITTI 115
L NLQVLDL NQ LTTL G+ L NL+TLDL +TT+
Sbjct: 298 GQLKNLQVLDLGSNQ-LTTLPEGIGQLKNLQTLDLDSNQLTTL 339
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 72/147 (48%), Gaps = 31/147 (21%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ L+ L+LS N T + L L+ L LD +TT+ Q + +L+NL++L
Sbjct: 159 IGQLKNLKSLNLSYNQIKTIPK----EIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 214
Query: 60 DLSSN------------------YYLHGSLEGLAN----LTNLQVLDLSGNQNLTTLG-- 95
DLS+N Y + L L N L NLQ L+L N+ LTTL
Sbjct: 215 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIRQLKNLQTLNLRNNR-LTTLSKE 273
Query: 96 LANLPNLKTLDLRDCGITTI-QGIQQF 121
+ L NLK+LDLR +TT +GI Q
Sbjct: 274 IEQLQNLKSLDLRSNQLTTFPKGIGQL 300
>gi|395510211|ref|XP_003759374.1| PREDICTED: leucine-rich repeat-containing protein 9 [Sarcophilus
harrisii]
Length = 1382
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL + T LK+L L C IT I+GL + KNLE L L N +E L +LT L+V+ L+
Sbjct: 71 GLESCTLLKELWLAECHITKIEGLEECKNLEKLFLYYNKI--TEIENLESLTKLEVIWLN 128
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTI 115
N GL NL NLK L+L I++I
Sbjct: 129 YNGIRAIEGLQNLKNLKDLNLAGNFISSI 157
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 17 NITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
N+ SL +L L+ LT ++KL + T + + L NLE LD S N+ + +LEG
Sbjct: 694 NLHGNSLNKLRDLSKLTGIQKLIISFNEFTCLDDVYYLYNLEYLDASHNHVI--TLEGFR 751
Query: 76 NLTNLQVLDLSGNQ 89
L L+ LDLS NQ
Sbjct: 752 GLVKLKYLDLSWNQ 765
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 5 RYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN 64
+ +++ LS N N+ +G L + N+ +L L L+ IT++ GL K + L +++N
Sbjct: 945 KLIRLTHLSINNNLLTG-LEKHIFENMLHLHYLSLENNKITSLVGLQKAYTIIELYINNN 1003
Query: 65 YYL-HGSLEGLANLTNLQVLDLSGN------QNLTTLGLANLPNLKTLD 106
+ + + L L NL +LDL GN +N L +LP+LK LD
Sbjct: 1004 FIATNQEIYNLKGLYNLVILDLCGNLIVWNQENYRLFVLFHLPDLKALD 1052
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 20 SGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTN 79
SG +GLA+ NL L + I+ I GL L+ L L+ + +EGL N
Sbjct: 42 SGYPCIVGLASFPNLTSLTVVAQNISKISGLESCTLLKELWLAECHI--TKIEGLEECKN 99
Query: 80 LQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
L+ L L N+ L +L L+ + L GI I+G+Q
Sbjct: 100 LEKLFLYYNKITEIENLESLTKLEVIWLNYNGIRAIEGLQ 139
>gi|449453658|ref|XP_004144573.1| PREDICTED: uncharacterized protein LOC101220128 [Cucumis sativus]
gi|449493191|ref|XP_004159217.1| PREDICTED: uncharacterized LOC101220128 [Cucumis sativus]
Length = 592
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 7 LQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN 64
L+VL+L AN IT+G+L R L L+L I I+GL +L L LDLS N
Sbjct: 334 LKVLNLPANSIGKITAGALPR-------GLHSLNLSKNNIANIEGLRELTRLRMLDLSYN 386
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
GLA+ ++L+ L L+GN+ GL L L LDLR I+T + + Q +
Sbjct: 387 RICRIG-HGLASCSSLKELYLAGNKISDVEGLHRLLKLCILDLRFNKISTAKSLGQLAA 444
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L L++LDLS N G GLA+ ++LK+L L G I+ ++GL +L L LD
Sbjct: 372 LRELTRLRMLDLSYNRICRIGH----GLASCSSLKELYLAGNKISDVEGLHRLLKLCILD 427
Query: 61 LSSNYYLHGSLEG--LANLTNLQVLDLSGNQNLTTLG 95
L N G AN +LQV+ L GN +G
Sbjct: 428 LRFNKISTAKSLGQLAANYNSLQVISLEGNPAQKNVG 464
>gi|21655193|gb|AAM28911.1| NBS/LRR [Pinus taeda]
Length = 509
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 27 GLANLTNLKKLDLDGC-GITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLD 84
G NL NL+ +D+ GC G+ + G L NL+ +D+S L +G NL NL+ +
Sbjct: 381 GFXNLANLQHVDMSGCSGLKQLPDGFGNLANLQHVDMSGXSGLEQLPDGFGNLANLRHIG 440
Query: 85 LSGNQNLTTL--GLANLPNLKTLDLRDC 110
+SG L L G NL +L+ +D+ C
Sbjct: 441 MSGCSGLKXLPDGFGNLAHLQHIDMSGC 468
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCG--ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
NL NL+ +++ C G L NL+ +D+S L +G NL NLQ +D+
Sbjct: 358 FGNLANLQHINMSRCWELKQLPDGFXNLANLQHVDMSGCSGLKQLPDGFGNLANLQHVDM 417
Query: 86 SGNQNLTTL--GLANLPNLKTLDLRDC 110
SG L L G NL NL+ + + C
Sbjct: 418 SGXSGLEQLPDGFGNLANLRHIGMSGC 444
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGC-GITTI-QGLAKLKNL 56
NL LQ +D+S L +L G NL NL+ + + GC G+ + G L +L
Sbjct: 406 FGNLANLQHVDMSG-----XSGLEQLPDGFGNLANLRHIGMSGCSGLKXLPDGFGNLAHL 460
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+ +D+S L +G L NLQ + +S
Sbjct: 461 QHIDMSGCEELQQLPDGFGXLANLQHIXMS 490
>gi|397906116|ref|ZP_10506941.1| internalin D [Caloramator australicus RC3]
gi|397160876|emb|CCJ34276.1| internalin D [Caloramator australicus RC3]
Length = 234
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 6/106 (5%)
Query: 17 NITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
NI++ +T G NL L+++ + + LA +K+L+ LDL++N + L
Sbjct: 120 NISNNKITNFRGFENLKALEEMKAFNNNVQDVSALANVKSLKYLDLANNQIKDA--KPLT 177
Query: 76 NLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL---RDCGITTIQGI 118
NL NL+VL+LS N+ G NL NLK LDL R T I+G+
Sbjct: 178 NLINLEVLNLSANRIEKIDGFENLKNLKELDLSQNRIKDFTPIRGL 223
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
T+LKKL++ IT +G LK LE + +N S LAN+ +L+ LDL+ NQ
Sbjct: 113 FTSLKKLNISNNKITNFRGFENLKALEEMKAFNNNVQDVS--ALANVKSLKYLDLANNQI 170
Query: 91 LTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
L NL NL+ L+L I I G +
Sbjct: 171 KDAKPLTNLINLEVLNLSANRIEKIDGFE 199
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LAN++ L+ LDL+ N + LT NL NL+ L+L I I G LKNL+ LD
Sbjct: 154 LANVKSLKYLDLANNQIKDAKPLT-----NLINLEVLNLSANRIEKIDGFENLKNLKELD 208
Query: 61 LSSN 64
LS N
Sbjct: 209 LSQN 212
>gi|46445969|ref|YP_007334.1| hypothetical protein pc0335 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399610|emb|CAF23059.1| hypothetical protein pc0335 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 642
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 64/128 (50%), Gaps = 9/128 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
LA L L LDLS +NIT L L L L+ L L GC T GLA L L AL
Sbjct: 500 LAPLVALTHLDLSWCFNITDAGLAHL--TPLVTLQHLGLSGCRRLTDVGLAHLTRLVALQ 557
Query: 60 DLSSNYYLHGSLEGLANLT---NLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
L N + + GLA+LT NLQ LDLS + LT GLA+L L+ LDLR C
Sbjct: 558 HLGLNRCDNLTDAGLAHLTPLINLQHLDLSECRKLTNAGLAHLTPLVALQRLDLRCCNKL 617
Query: 114 TIQGIQQF 121
T + F
Sbjct: 618 TGARLAHF 625
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 56/124 (45%), Gaps = 9/124 (7%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY 66
++ L+ S N ++T L L L N NLK L L C T GLA L L AL + Y
Sbjct: 306 IEALNFSKNAHLTDAQL--LTLKNCKNLKVLQLQACHNFTDAGLAHLTPLMALQHLNLSY 363
Query: 67 LH----GSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKT---LDLRDCGITTIQGIQ 119
L LA L LQ L+LS NLT GLA+L L L+L C T G+
Sbjct: 364 CKNLTDAGLAHLAPLVVLQHLNLSSCHNLTDAGLAHLTPLVALTHLNLSWCNKLTDAGLA 423
Query: 120 QFTS 123
T
Sbjct: 424 HLTP 427
>gi|366164440|ref|ZP_09464195.1| leucine-rich repeat-containing protein [Acetivibrio cellulolyticus
CD2]
Length = 353
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 70/141 (49%), Gaps = 20/141 (14%)
Query: 1 LANLRYLQVLDLSANY--NITS-GSLTRL--------------GLANLTNLKKLDLDGCG 43
L+N L LDLS N+ ++T G LT L L NLTNL KL L
Sbjct: 105 LSNFTELTDLDLSVNHISDLTPLGDLTNLTSLKLCVNEISDLTPLRNLTNLNKLWLHWNS 164
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNL 102
I+ + L+KL NL LDL+ N +L L++LTNL L LS N + L L+NL NL
Sbjct: 165 ISDLTPLSKLINLTELDLAVNEI--SNLTPLSDLTNLTTLYLSYNHQIKDLTPLSNLTNL 222
Query: 103 KTLDLRDCGITTIQGIQQFTS 123
K L+L D I I + S
Sbjct: 223 KDLELADNRINDIAPLSNLRS 243
>gi|260821866|ref|XP_002606324.1| hypothetical protein BRAFLDRAFT_67566 [Branchiostoma floridae]
gi|229291665|gb|EEN62334.1| hypothetical protein BRAFLDRAFT_67566 [Branchiostoma floridae]
Length = 844
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 7/123 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NLR L LDL Y+ +T GLA L +L+ L L I I L L+ L+ LD
Sbjct: 209 LSNLRRLIFLDL---YDNQIEEIT--GLAALKSLRVLMLGKNRIKKIANLDNLQKLDVLD 263
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
L N L +E L +L+ L+VL+L+GN + L+ + +L L+LR I + +
Sbjct: 264 LHGN--LISKIENLQHLSELRVLNLAGNSIIHVENLSGMDSLAELNLRRNQIVNVTEVDT 321
Query: 121 FTS 123
S
Sbjct: 322 LPS 324
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 33 NLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLT 92
+L+ L+L I+ IQ L+ L+ L LDL N + GLA L +L+VL L N+
Sbjct: 192 HLRLLNLQHNLISKIQHLSNLRRLIFLDLYDNQI--EEITGLAALKSLRVLMLGKNRIKK 249
Query: 93 TLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
L NL L LDL I+ I+ +Q +
Sbjct: 250 IANLDNLQKLDVLDLHGNLISKIENLQHLS 279
>gi|322801630|gb|EFZ22271.1| hypothetical protein SINV_14234 [Solenopsis invicta]
Length = 323
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L LT+L +L+L I I+ L L NLE LDLS N +EGL NL NLQ L LS
Sbjct: 70 NLDTLTSLVELELRDNQIVAIENLDALVNLELLDLSFNRI--KKIEGLGNLLNLQKLFLS 127
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
N+ L + +L NL TL+L D I I+ ++
Sbjct: 128 SNKILQIENVGHLVNLTTLELGDNKIREIENLE 160
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 27/134 (20%)
Query: 7 LQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY 65
L++LDLS N + ++ GL NL NL+KL L I I+ + L NL L+L N
Sbjct: 99 LELLDLSFN------RIKKIEGLGNLLNLQKLFLSSNKILQIENVGHLVNLTTLELGDNK 152
Query: 66 YLH-GSLEGLANLTNL--------QVLDLSGNQNLTTLGL--------ANLPNLKTLD-- 106
+LE L LTNL ++ +L ++LT L L N+ LK LD
Sbjct: 153 IREIENLESLDKLTNLYLGKNKITKIQNLDSLKDLTLLSLQSNRITKIENIEELKKLDQL 212
Query: 107 -LRDCGITTIQGIQ 119
L + GIT I+GI+
Sbjct: 213 YLSENGITCIEGIE 226
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Query: 5 RYLQVLDLSANYNITSGSLTRLGLANLTNLKKLD------LDGCGITTIQGLAKLKNLEA 58
+ LQ+ ++ N+T+ L + + NL+ LD L IT IQ L LK+L
Sbjct: 130 KILQIENVGHLVNLTTLELGDNKIREIENLESLDKLTNLYLGKNKITKIQNLDSLKDLTL 189
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L L SN +E + L L L LS N G+ N P L TLDL + I IQ +
Sbjct: 190 LSLQSNRI--TKIENIEELKKLDQLYLSENGITCIEGIENCPGLTTLDLANNKIKKIQNV 247
Query: 119 QQF 121
Sbjct: 248 DHL 250
>gi|289434013|ref|YP_003463885.1| cell wall surface anchor (LPXTG motif) family protein [Listeria
seeligeri serovar 1/2b str. SLCC3954]
gi|289170257|emb|CBH26797.1| cell wall surface anchor (LPXTG motif) family protein [Listeria
seeligeri serovar 1/2b str. SLCC3954]
Length = 799
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 20/132 (15%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEA 58
++ L Y++ L + T S+T L L NLT L +D DG I ++ LA L NLE
Sbjct: 90 ISGLEYMENL---TGIDFTYCSVTDLTPLTNLTKLTYVDFDGNNNIVNLEPLAGLTNLET 146
Query: 59 LDLSSNYYLHGSLEG--------LANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDC 110
L+L G+ +G LANLTNL+ LDL GN + L+ L NL++LD+ +
Sbjct: 147 LNL-------GAFDGNSVVDISPLANLTNLKALDLEGNNIVDVSPLSGLTNLESLDIYNN 199
Query: 111 GITTIQGIQQFT 122
I+ I + T
Sbjct: 200 EISDISALSSLT 211
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 30 NLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
+L ++ +LD+ GI++I GL ++NL +D + Y L L NLT L +D GN
Sbjct: 73 DLDSITELDVTSAGISSISGLEYMENLTGIDFT--YCSVTDLTPLTNLTKLTYVDFDGNN 130
Query: 90 NLTTL-GLANLPNLKTLDL 107
N+ L LA L NL+TL+L
Sbjct: 131 NIVNLEPLAGLTNLETLNL 149
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 10 LDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH 68
LD ++TS ++ + GL + NL +D C +T + L L L +D N +
Sbjct: 74 LDSITELDVTSAGISSISGLEYMENLTGIDFTYCSVTDLTPLTNLTKLTYVDFDGNNNIV 133
Query: 69 GSLEGLANLTNLQVLDL---SGNQNLTTLGLANLPNLKTLDLR 108
+LE LA LTNL+ L+L GN + LANL NLK LDL
Sbjct: 134 -NLEPLAGLTNLETLNLGAFDGNSVVDISPLANLTNLKALDLE 175
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 56/110 (50%), Gaps = 26/110 (23%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNLK LDL+G I + L+ L NLE+LD+ +N + L++LT L L +
Sbjct: 163 LANLTNLKALDLEGNNIVDVSPLSGLTNLESLDIYNNEI--SDISALSSLTKLNSLFIGA 220
Query: 88 N-----------QNLTTL-----GLAN--------LPNLKTLDLRDCGIT 113
N QNLT L GL N L +LKTL ++D IT
Sbjct: 221 NTISDLTPLTSMQNLTILESRGNGLVNKDLEIINSLSSLKTLRMQDNDIT 270
>gi|355561006|gb|EHH17692.1| hypothetical protein EGK_14151 [Macaca mulatta]
Length = 826
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 9/118 (7%)
Query: 8 QVLDLSANYNITSGSLTR------LGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDL 61
++ DLSA + +T L GL NL L L ITTI GL KL ++ L L
Sbjct: 208 EICDLSAYHALTKLILDGNEIEEISGLEKCNNLTHLSLANNKITTINGLNKLP-IKILSL 266
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
S+N ++ GL +L LQ LDLS NQ + GL N L+ +DL D I ++ I+
Sbjct: 267 SNNQI--ETITGLEDLKALQNLDLSHNQISSLQGLENHDLLEVIDLEDNKIAELREIE 322
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 17 NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
++ + +T + N +K L L I TI GL LK L+ LDLS N SL+GL N
Sbjct: 244 SLANNKITTINGLNKLPIKILSLSNNQIETITGLEDLKALQNLDLSHNQI--SSLQGLEN 301
Query: 77 LTNLQVLDLSGNQ--NLTTLG-LANLPNLKTLDL 107
L+V+DL N+ L + + NLP L+ L+L
Sbjct: 302 HDLLEVIDLEDNKIAELREIEYIKNLPILRVLNL 335
>gi|343420997|emb|CCD18942.1| leucine-rich repeat protein, putative [Trypanosoma vivax Y486]
Length = 623
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L ++ L+VL LS +IT S L+ L+ L+KLDL C GIT + L+ L LE L
Sbjct: 426 LKKVKKLEVLYLSGCTSITDVS----PLSTLSGLEKLDLRYCTGITDVSPLSTLSGLEKL 481
Query: 60 DLSSNYYLHG--SLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC 110
DL Y G + L+ L+ L LDLSG +T + L+ L L+TLDL +C
Sbjct: 482 DLR---YCTGITDVSPLSTLSGLGKLDLSGCTGITDVSPLSTLSRLETLDLSEC 532
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ LDL IT S L+ L+ L KLDL GC GIT + L+ L LE L
Sbjct: 472 LSTLSGLEKLDLRYCTGITDVS----PLSTLSGLGKLDLSGCTGITDVSPLSTLSRLETL 527
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLS--GNQNLTTLGLANLPNLKTLDLRDC 110
DLS + ++ L +L L+ L LS + + L L+TLDL C
Sbjct: 528 DLSECPGVMSDVDSLCSLRMLRELRLSRLAINDAVLRDIVVLKCLRTLDLSHC 580
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 29/147 (19%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ L+L IT S L+ ++ L+ LD+ GC GIT + L+ L NL L
Sbjct: 334 LSKLSRLETLNLMYCTGITDVS----PLSLMSRLEMLDVSGCTGITDVSPLSDLSNLRTL 389
Query: 60 DLS-----------------SNYYLHG-----SLEGLANLTNLQVLDLSGNQNLTTLG-L 96
DLS +N Y+ G + L + L+VL LSG ++T + L
Sbjct: 390 DLSYCTGITDVSPLSEIIELANLYMIGLTSITDVSLLKKVKKLEVLYLSGCTSITDVSPL 449
Query: 97 ANLPNLKTLDLRDC-GITTIQGIQQFT 122
+ L L+ LDLR C GIT + + +
Sbjct: 450 STLSGLEKLDLRYCTGITDVSPLSTLS 476
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 8/125 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ L+L IT S L+ L+ L+ L+L C GIT + L+ + NL L
Sbjct: 81 LSKLSRLETLNLMYCTGITDVS----PLSKLSRLETLNLMYCTGITDVSPLSLISNLRTL 136
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDC-GITTIQG 117
DLS + L L+ ++NL L LS +T + L+ L L+TL+L C GIT +
Sbjct: 137 DLSHCTGITDVLP-LSLMSNLCSLYLSHCTGITDVPPLSKLSRLETLNLMYCTGITDVSP 195
Query: 118 IQQFT 122
+ + +
Sbjct: 196 LSKLS 200
>gi|326676051|ref|XP_003200492.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 1
[Danio rerio]
Length = 1511
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L+ L+ L L CG+T++ GL + + +D+ N H EG L++LQ+L L
Sbjct: 708 LSECNKLQTLTLRRCGLTSLDGLNQCSQIRYIDVQENSITHVDCEG---LSSLQILLLGR 764
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
NQ + GL NL+TL L I+ I G+
Sbjct: 765 NQLMNIHGLDEAQNLQTLQLSHNNISLISGL 795
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY 66
LQ L LS N NI+ S GL L L L +D + + +GL ++ L LD S NY
Sbjct: 779 LQTLQLSHN-NISLIS----GLGALKMLLHLSVDHNQLLSTRGLKEIYTLLHLDCSYNYL 833
Query: 67 LHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
H +EGL N L LDL GN L N L+ L L D I ++ ++ +
Sbjct: 834 SH--VEGLENCALLNTLDLKGNSLTELPVLQNHVLLRDLYLDDNLIPSLDDLKSY 886
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 17 NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
++ S+T + L++L+ L L + I GL + +NL+ L LS N + GL
Sbjct: 740 DVQENSITHVDCEGLSSLQILLLGRNQLMNIHGLDEAQNLQTLQLSHNNI--SLISGLGA 797
Query: 77 LTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
L L L + NQ L+T GL + L LD ++ ++G++
Sbjct: 798 LKMLLHLSVDHNQLLSTRGLKEIYTLLHLDCSYNYLSHVEGLE 840
>gi|46447199|ref|YP_008564.1| hypothetical protein pc1565 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400840|emb|CAF24289.1| hypothetical protein pc1565 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 1143
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLK---NLEALDLSSN 64
Q L+L N+T L L ++LT+LK LDL C T GLA L NL+ L+L+
Sbjct: 317 QHLNLGCCNNLTDSGLAHL--SHLTSLKHLDLRDCAKLTDSGLAHLSLLVNLQYLNLNRC 374
Query: 65 YYLHGS-LEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQGIQQ 120
Y L L L++L LQ LDL + LT+ GLA+L L+ LDL CG T +G+
Sbjct: 375 YNLTDRGLSHLSHLVALQYLDLGLCKKLTSSGLAHLSPLVALQYLDLDRCGEITDRGLAH 434
Query: 121 FT 122
+
Sbjct: 435 LS 436
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L++L L+ LDL +T L L L L NL+ L+L+ C T +GLA L +L AL
Sbjct: 925 LSHLTSLKHLDLRDCAKLTDSGLAHLSL--LVNLQYLNLNRCNNLTDRGLAHLSHLVALQ 982
Query: 60 --DLSSNYYLHGS-LEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
DL Y + S L L+ L NLQ L+L+ NLT GLA+L L TL
Sbjct: 983 HLDLGECYKITDSGLAHLSLLVNLQYLNLNRCDNLTDRGLAHLSRLVTL 1031
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 71/155 (45%), Gaps = 34/155 (21%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L++L LQ LDL Y IT L L L L NL+ L+L+ C T +GLA L L L
Sbjct: 975 LSHLVALQHLDLGECYKITDSGLAHLSL--LVNLQYLNLNRCDNLTDRGLAHLSRLVTLQ 1032
Query: 60 DLSSNYYLHGSLEGLANLTNL---QVLDLSGNQNLTTLGLAN------------------ 98
L+ N + + +GLA L+ L + L+L NLT+ GLA+
Sbjct: 1033 HLNLNCCVCLTDDGLAYLSPLVALRHLNLRSCDNLTSAGLAHLTPLIALQYLNLSYCDSL 1092
Query: 99 ----------LPNLKTLDLRDCGITTIQGIQQFTS 123
L +LK LDL +C TI G+ F +
Sbjct: 1093 NDNGLTHLTRLASLKHLDLSECPYFTISGLAHFKA 1127
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 71/155 (45%), Gaps = 34/155 (21%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L++L LQ LDL +TS L L + L L+ LDLD CG T +GLA L L AL
Sbjct: 385 LSHLVALQYLDLGLCKKLTSSGLAHL--SPLVALQYLDLDRCGEITDRGLAHLSRLVALQ 442
Query: 60 DLSSNYYLHGSLEGLANLTN---LQVLDLSGNQNLTTLGLAN------------------ 98
L+ N + +GLA L+ L+ L+L NLT+ GLA+
Sbjct: 443 HLNLNCCACLTDDGLAYLSPLVALRHLNLRCCGNLTSAGLAHLTPLIALQYLNLSYCDSL 502
Query: 99 ----------LPNLKTLDLRDCGITTIQGIQQFTS 123
L +LK LDL +C T G+ FT+
Sbjct: 503 NDNGLTHLTRLASLKHLDLSECPYFTDSGLAHFTA 537
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA-- 58
L + + L+VL L N T L L + L L+ LDL GC T GLA L L A
Sbjct: 775 LKDCKNLKVLRLHECRNFTDAGLAHL--SPLVALQHLDLGGCYKITDSGLAHLSRLVALQ 832
Query: 59 -LDLSSNYYLHGS-LEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
LDL Y + S L L+ L LQ L+L+ LT GLA L + L+ LDL C
Sbjct: 833 HLDLGGCYEITDSGLTYLSRLVALQHLNLNRCVCLTDDGLAYLSHLVALQYLDLDRCWKI 892
Query: 114 TIQG 117
T +G
Sbjct: 893 TDRG 896
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 66/154 (42%), Gaps = 34/154 (22%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L + + L+VL L N T L L + L L+ LDL GC T GL L L AL
Sbjct: 210 LKDCKNLKVLRLHECRNFTDAGLAHL--SRLVALQHLDLGGCYKITDSGLTYLSRLVALQ 267
Query: 60 DLSSNYYLHGSLEGLANLTNL----------------------------QVLDLSGNQNL 91
L+ N + + +GLA L++L Q L+L NL
Sbjct: 268 HLNLNCCVCLTDDGLAYLSHLVALQHLDLGECYKITDSGLAHLSSLLALQHLNLGCCNNL 327
Query: 92 TTLGLANLPN---LKTLDLRDCGITTIQGIQQFT 122
T GLA+L + LK LDLRDC T G+ +
Sbjct: 328 TDSGLAHLSHLTSLKHLDLRDCAKLTDSGLAHLS 361
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 56/119 (47%), Gaps = 9/119 (7%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA---LDLSS 63
++ LD S N +T L L L + NLK L L C T GLA L L A LDL
Sbjct: 756 IESLDFSNNAYLTDAHL--LALKDCKNLKVLRLHECRNFTDAGLAHLSPLVALQHLDLGG 813
Query: 64 NYYLHGS-LEGLANLTNLQVLDLSGNQNLTTLG---LANLPNLKTLDLRDCGITTIQGI 118
Y + S L L+ L LQ LDL G +T G L+ L L+ L+L C T G+
Sbjct: 814 CYKITDSGLAHLSRLVALQHLDLGGCYEITDSGLTYLSRLVALQHLNLNRCVCLTDDGL 872
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 55/118 (46%), Gaps = 26/118 (22%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYL 67
Q L+L N+T L L ++LT+LK LDL C T GLA
Sbjct: 907 QHLNLGCCNNLTDSGLAHL--SHLTSLKHLDLRDCAKLTDSGLA---------------- 948
Query: 68 HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQGIQQFT 122
H SL L NLQ L+L+ NLT GLA+L + L+ LDL +C T G+ +
Sbjct: 949 HLSL-----LVNLQYLNLNRCNNLTDRGLAHLSHLVALQHLDLGECYKITDSGLAHLS 1001
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA---LDLSS 63
++ LD S N +T L L L + NLK L L C T GLA L L A LDL
Sbjct: 191 IESLDFSNNAYLTDAHL--LALKDCKNLKVLRLHECRNFTDAGLAHLSRLVALQHLDLGG 248
Query: 64 NYYLHGS-LEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQG 117
Y + S L L+ L LQ L+L+ LT GLA L + L+ LDL +C T G
Sbjct: 249 CYKITDSGLTYLSRLVALQHLNLNCCVCLTDDGLAYLSHLVALQHLDLGECYKITDSG 306
>gi|363727665|ref|XP_416125.3| PREDICTED: leucine-rich repeat and IQ domain-containing protein 1
[Gallus gallus]
Length = 1338
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 17 NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
N+ ++ + NL NL L L+ +++I GL NL+ L+LS N + GL +
Sbjct: 552 NVEENNIQVIDCENLENLCILILNKNHLSSISGLDGCINLQNLELSYNRITR--IGGLES 609
Query: 77 LTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
L NLQ L + NQ ++T GL +P L LD +T ++GI+
Sbjct: 610 LKNLQQLTVDHNQLISTKGLCEVPTLIHLDCSFNHLTQVEGIE 652
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L+ +NL+ L L CG+ ++GL+ K+L+ +++ N E NL NL +L L+
Sbjct: 520 LSQCSNLQVLTLRRCGLVALEGLSSCKDLKYINVEENNIQVIDCE---NLENLCILILNK 576
Query: 88 NQNLTTLGLANLPNLKTLDL------RDCGITTIQGIQQFT 122
N + GL NL+ L+L R G+ +++ +QQ T
Sbjct: 577 NHLSSISGLDGCINLQNLELSYNRITRIGGLESLKNLQQLT 617
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
Query: 7 LQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY 65
LQ L+LS N +TR+G L +L NL++L +D + + +GL ++ L LD S N+
Sbjct: 591 LQNLELSYN------RITRIGGLESLKNLQQLTVDHNQLISTKGLCEVPTLIHLDCSFNH 644
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQ 116
+EG+ + LQ+L L N L N L+ L L D I++++
Sbjct: 645 LTQ--VEGIESCGLLQILKLHSNNLQEFPRLENHVLLRELYLDDNSISSVR 693
>gi|168064075|ref|XP_001783991.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664498|gb|EDQ51216.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI--QGLAKLKNLEA 58
L NL L L+LS + +TS L NLT+L LDL GC T+ L KL +L +
Sbjct: 302 LGNLTSLTSLNLSGYWKLTS---LPNELGNLTSLTSLDLSGCSNLTLLPNELGKLISLTS 358
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDC 110
L+LS + L L NLT+L L+LSG NLT+L L NL +L +L+L +C
Sbjct: 359 LNLSGCWKLTSLPNELGNLTSLTSLNLSGCLNLTSLPNELGNLTSLTSLNLSEC 412
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQG-LAKLKNLEA 58
L NL L L+LS N+TS L NLT+L L+L C +T++ L L +L +
Sbjct: 374 LGNLTSLTSLNLSGCLNLTS---LPNELGNLTSLTSLNLSECWKLTSLPNELGNLTSLTS 430
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDC 110
L+L +L L NLT+L LDLSG NLT+L L NL +L +LDL +C
Sbjct: 431 LNLKRCSWLTSLPNELDNLTSLTSLDLSGCSNLTSLPNELGNLTSLTSLDLSEC 484
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 60/115 (52%), Gaps = 7/115 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQG-LAKLKNLEA 58
L NL L L LS N+TS L NLT+L L L GC +T++ L +L +
Sbjct: 86 LGNLTSLTSLYLSGCSNLTS---LPNELGNLTSLTSLYLSGCLNLTSLPNELGNFTSLTS 142
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCG 111
L L+ + L L NLT+L L LSG NLT+L L NL +L +L++ DC
Sbjct: 143 LWLNECFKLTSLPNELGNLTSLTSLYLSGCSNLTSLPNELGNLISLTSLNICDCS 197
>gi|153953043|ref|YP_001393808.1| surface-layer protein [Clostridium kluyveri DSM 555]
gi|146345924|gb|EDK32460.1| Predicted surface-layer protein [Clostridium kluyveri DSM 555]
Length = 422
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY-LHGSLEGLANLTNLQVLDL 85
G+ NLTNLK L+L I L L L L+LS NY+ L+ + L NL NL+ LDL
Sbjct: 150 GIENLTNLKSLNLTFSYAVDISPLKDLTKLHYLNLSRNYFILNKDISSLKNLVNLERLDL 209
Query: 86 S--GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
S G ++LT L N+ NL+ L+L IT + I+
Sbjct: 210 SSDGIEDLTP--LKNMKNLRVLNLYSNEITDLNPIK 243
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L +L L L+LS NY I + ++ L NL NL++LDL GI + L +KNL L+
Sbjct: 173 LKDLTKLHYLNLSRNYFILNKDIS--SLKNLVNLERLDLSSDGIEDLTPLKNMKNLRVLN 230
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSG 87
L SN L + +L L+ ++LSG
Sbjct: 231 LYSNEIT--DLNPIKDLNQLKEINLSG 255
>gi|326434488|gb|EGD80058.1| hypothetical protein PTSG_10334 [Salpingoeca sp. ATCC 50818]
Length = 396
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 17 NITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
N+ S+T + L +L NL LD+ I I GL +L++L L L N SL G+
Sbjct: 155 NLQHNSITAIANLDHLENLIFLDMYDNRIQRISGLERLRSLRVLMLGRNSI--SSLAGIE 212
Query: 76 NLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL 107
L +L VLDL GN TT G+A+L +L+ L+L
Sbjct: 213 ALVHLDVLDLHGNAITTTAGIAHLRSLRVLNL 244
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 10/120 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L LR L+VL L N S++ L G+ L +L LDL G ITT G+A L++L L
Sbjct: 189 LERLRSLRVLMLGRN------SISSLAGIEALVHLDVLDLHGNAITTTAGIAHLRSLRVL 242
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLA-NLPNLKTLDLRDCGITTIQGI 118
+L+SN L + LA L +L L++S NQ + L + P+L+ L L D + + +GI
Sbjct: 243 NLASN--LIKDMSPLAGLASLVELNISRNQIQHCIDLVHSAPHLQRLFLSDNLLRSTKGI 300
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 17 NITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
N+ + SL R + N +L+ L+L IT I L L+NL LD+ N + GL
Sbjct: 133 NLDNRSLDRCPYIRNEPSLRLLNLQHNSITAIANLDHLENLIFLDMYDNRIQR--ISGLE 190
Query: 76 NLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
L +L+VL L N + G+ L +L LDL ITT GI S
Sbjct: 191 RLRSLRVLMLGRNSISSLAGIEALVHLDVLDLHGNAITTTAGIAHLRS 238
>gi|403373737|gb|EJY86791.1| Leucine Rich Repeat family protein [Oxytricha trifallax]
Length = 497
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 6 YLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN 64
Y + +L+ + T++ L T+LK L +G G+T I+GL + L +L L N
Sbjct: 40 YYRTAELNEKLYLHYKGFTKIQNLEQFTDLKCLYFEGNGVTKIEGLEQNVKLRSLYLQEN 99
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLR 108
L +EGL L +L L+LS N GLANL L+TL L+
Sbjct: 100 --LIEKMEGLETLEDLYALNLSDNIIQKVEGLANLKKLETLQLK 141
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYL 67
Q DL Y +G GL L+ L L I ++GL L++L AL+LS N +
Sbjct: 65 QFTDLKCLYFEGNGVTKIEGLEQNVKLRSLYLQENLIEKMEGLETLEDLYALNLSDN--I 122
Query: 68 HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
+EGLANL L+ L L N+ +L N N
Sbjct: 123 IQKVEGLANLKKLETLQLKRNRIGKSLNSNNDSN 156
>gi|46447560|ref|YP_008925.1| hypothetical protein pc1926 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401201|emb|CAF24650.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 761
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL---DLSS 63
LQ LDLS +T L L LT L+ LDL C T GLA L L AL +LSS
Sbjct: 496 LQYLDLSHCNKLTDAGLAHL--TPLTALQYLDLSNCIKLTDDGLAHLTPLMALQHLNLSS 553
Query: 64 NYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQGI 118
Y L L+ LT LQ LDLS QNLT LA+L L+ LDLR C T G+
Sbjct: 554 CYKLTDAGFAHLSPLTALQRLDLSYCQNLTDAELAHLTPLTALQRLDLRYCENLTDAGL 612
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L L LQ LDLS +T L L L L+ L+L C T G A L L AL
Sbjct: 515 LTPLTALQYLDLSNCIKLTDDGLAHL--TPLMALQHLNLSSCYKLTDAGFAHLSPLTALQ 572
Query: 60 --DLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLP---NLKTLDLRDCGIT 113
DLS L L L LT LQ LDL +NLT GL +L +L+ L+LR CG
Sbjct: 573 RLDLSYCQNLTDAELAHLTPLTALQRLDLRYCENLTDAGLVHLKLLTDLQYLNLRGCGYL 632
Query: 114 TIQGIQQFTS 123
T G+ T+
Sbjct: 633 TDAGLAHLTT 642
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL---D 60
L LQ L+LS NIT+ L L LT L+ L+L C T GL L L AL D
Sbjct: 418 LTALQYLNLSQCDNITNAGLEHL--IPLTALQYLNLSQCEKLTDAGLEHLTPLTALQQLD 475
Query: 61 LSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQ 116
LS Y L L LT LQ LDLS LT GLA+L L+ LDL +C T
Sbjct: 476 LSWCYKLTDAGFAHLTPLTGLQYLDLSHCNKLTDAGLAHLTPLTALQYLDLSNCIKLTDD 535
Query: 117 GIQQFTS 123
G+ T
Sbjct: 536 GLAHLTP 542
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKN---LE 57
L L LQ LDL N+T L L L LT+L+ L+L GCG T GLA L L+
Sbjct: 590 LTPLTALQRLDLRYCENLTDAGLVHLKL--LTDLQYLNLRGCGYLTDAGLAHLTTLSGLQ 647
Query: 58 ALDLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLG 95
LDLSS L L L LT+LQ L+LS +NLT G
Sbjct: 648 HLDLSSCEKLTDAGLVHLKLLTDLQYLNLSRCENLTDEG 686
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 2 ANLRYLQVLDLSANYNITS-GSLTRLGLANLTNL---KKLDLDGCGITTIQGLAKLKNLE 57
A L +L +L + N++S LT GLA+LT L + LDL C T +GL L L
Sbjct: 360 AGLEHLALLTSLQHLNLSSCKKLTDAGLAHLTPLMALQHLDLSICNKLTDRGLTHLNPLT 419
Query: 58 ALDL----SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDC 110
AL + + LE L LT LQ L+LS + LT GL +L L+ LDL C
Sbjct: 420 ALQYLNLSQCDNITNAGLEHLIPLTALQYLNLSQCEKLTDAGLEHLTPLTALQQLDLSWC 479
Query: 111 GITTIQGIQQFTS 123
T G T
Sbjct: 480 YKLTDAGFAHLTP 492
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNL---E 57
L + + L+ L L A +T L L L LT L+ L+L C T GLA L L +
Sbjct: 215 LKDCKNLKALHLEACQALTDDGLEHLTL--LTALQHLNLSRCKNLTDAGLAHLTPLTGLQ 272
Query: 58 ALDLSS-NYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
LDLS N + L L LT LQ LDL G +T GL++L L+ L L C
Sbjct: 273 YLDLSHCNKFTDAGLAYLEILTALQHLDLRGCDKITDAGLSHLTPLVALQYLSLSQCWNL 332
Query: 114 TIQGI 118
T G+
Sbjct: 333 TDAGL 337
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 66/123 (53%), Gaps = 9/123 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L LQ LDLS+ +T L L L LT+L+ L+L C T +GLA L L AL
Sbjct: 640 LTTLSGLQHLDLSSCEKLTDAGLVHLKL--LTDLQYLNLSRCENLTDEGLALLTPLTALQ 697
Query: 61 -LSSNYYLHGSLEGLANLTNL---QVLDLSGNQNLTTLGLANLP---NLKTLDLRDCGIT 113
L Y ++ + GLA+LT L Q LDLS NLT GL +L L+ L+L D I+
Sbjct: 698 HLKLRYCINLTDAGLAHLTPLTGLQRLDLSQCWNLTDAGLIHLKLLTALQHLNLSDTNIS 757
Query: 114 TIQ 116
+Q
Sbjct: 758 PMQ 760
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 54/118 (45%), Gaps = 18/118 (15%)
Query: 8 QVLDLSANYNITSGSLTRLGLAN---LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN 64
Q+ + N S + RL +N LTN L L C KNL+AL L +
Sbjct: 181 QLAEFERIINHFSKKIERLNFSNQVYLTNAHLLALKDC-----------KNLKALHLEAC 229
Query: 65 YYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQGI 118
L LE L LT LQ L+LS +NLT GLA+L L+ LDL C T G+
Sbjct: 230 QALTDDGLEHLTLLTALQHLNLSRCKNLTDAGLAHLTPLTGLQYLDLSHCNKFTDAGL 287
>gi|9631420|ref|NP_048328.1| ORF MSV257 leucine rich repeat gene family protein, similar to
Amsacta moorei entomopoxvirus Q3 ORF SW:P28854
[Melanoplus sanguinipes entomopoxvirus]
gi|4049773|gb|AAC97733.1| ORF MSV257 leucine rich repeat gene family protein, similar to
Amsacta moorei entomopoxvirus Q3 ORF SW:P28854
[Melanoplus sanguinipes entomopoxvirus]
Length = 707
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 62/131 (47%), Gaps = 26/131 (19%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDL--DGCGITTIQGLAKLKN-LEALDLSS 63
LQVLD+S N N S+ L + LTNLK L++ + C I L KLK L+ L++S+
Sbjct: 127 LQVLDISNNINCEDKSINVLNI--LTNLKILNISNNNCDYKIIDNLNKLKKRLQVLNISN 184
Query: 64 NY-------YLH--------------GSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNL 102
N YL S L N T LQ+LD+S N+N+ T L P L
Sbjct: 185 NEQLSKKIDYLRLPNLIDFNCSSCNIKSFNFLNNFTKLQILDISNNENIWTYALPLPPFL 244
Query: 103 KTLDLRDCGIT 113
++ C IT
Sbjct: 245 IKVNCSGCNIT 255
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 31/144 (21%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY 66
L+VL++S N ++ S + L L NL NL + C I L+K NL+ LD+S+N
Sbjct: 82 LKVLNISNNSHL-SEDIDDLRLPNLINL---NCSSCNIKFFDFLSKFTNLQVLDISNNIN 137
Query: 67 LH-GSLEGLANLTNLQVLDLSGN--------------QNLTTLGLAN------------L 99
S+ L LTNL++L++S N + L L ++N L
Sbjct: 138 CEDKSINVLNILTNLKILNISNNNCDYKIIDNLNKLKKRLQVLNISNNEQLSKKIDYLRL 197
Query: 100 PNLKTLDLRDCGITTIQGIQQFTS 123
PNL + C I + + FT
Sbjct: 198 PNLIDFNCSSCNIKSFNFLNNFTK 221
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 62/143 (43%), Gaps = 29/143 (20%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L N LQ+LD+S N NI + +L L K++ GC IT L + NLE LD
Sbjct: 216 LNNFTKLQILDISNNENIWTYALPLPPF-----LIKVNCSGCNITNSDFLRYVDNLEELD 270
Query: 61 LSSN-----YYLHGSLEG-------------LANLTNLQVLDLSGN-----QNLTTLGLA 97
+S+N Y+ ++ L L NLQ L++S N + + +
Sbjct: 271 ISNNPDLKIEYMPTKIKKLNISECYIKNDNFLKGLNNLQELNISYNPYNYFRKSIEIDID 330
Query: 98 NLPN-LKTLDLRDCGITTIQGIQ 119
NL N L L LR C I + +
Sbjct: 331 NLSNTLIKLYLRKCNIKNVSSFK 353
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L +L L+ LD+S N+ I SL + ++ K+ C IT L L NL+ LD
Sbjct: 433 LKDLNNLKELDISGNWEICFSSLPK-------SIIKIKCKNCNITNTDFLNNLDNLQELD 485
Query: 61 LSSNYYLH 68
+S NYY++
Sbjct: 486 MSVNYYIN 493
>gi|356510976|ref|XP_003524208.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At2g24230-like [Glycine max]
Length = 665
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI-TTIQGLAKLKNLEAL 59
L+ R L++LDLS N +T S G NLT L+ LDL C + T I+ ++ L +L L
Sbjct: 154 LSVFRNLKILDLSHNNLVTLPS----GFQNLTKLQHLDLSSCNLQTNIKAISSLDSLNHL 209
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANL 99
DLS+N + LT L+ L++S N +++ + L
Sbjct: 210 DLSNNNFTGNFPSDFPPLTTLKFLNISFNNFTSSISVNRL 249
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 28/140 (20%)
Query: 1 LANLRYLQVLDLSAN--------YNITSGSLTRLGLA------------------NLTNL 34
L N+ LQV+DLS N + +S SL + L+ + +++
Sbjct: 79 LRNMSKLQVIDLSGNALQGHVPCWFWSSSSLLEINLSRNRFGGSILKPTAENTSFSFSSI 138
Query: 35 KKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG-NQNLTT 93
K L+L T L+ +NL+ LDLS N L G NLT LQ LDLS N
Sbjct: 139 KTLNLSHNRFTNSIQLSVFRNLKILDLSHN-NLVTLPSGFQNLTKLQHLDLSSCNLQTNI 197
Query: 94 LGLANLPNLKTLDLRDCGIT 113
+++L +L LDL + T
Sbjct: 198 KAISSLDSLNHLDLSNNNFT 217
>gi|260810360|ref|XP_002599932.1| hypothetical protein BRAFLDRAFT_74056 [Branchiostoma floridae]
gi|229285216|gb|EEN55944.1| hypothetical protein BRAFLDRAFT_74056 [Branchiostoma floridae]
Length = 1150
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNY 65
L++LDL N ++ SL GL NL ++ L+ CG+ T+ + ++ L+ + L+ N
Sbjct: 194 LKILDLEDNCSL---SLVPDGLENLEVIESLNFSYCGVETLPDSIGQISTLKKIHLAGNK 250
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITT 114
L + L NL+ LDL GN+ L++L L L NL+ L ++ G T
Sbjct: 251 -LRTLPDSFGRLLNLETLDLEGNRRLSSLPL-TLHNLRKLKDKETGTNT 297
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 67/125 (53%), Gaps = 12/125 (9%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG-LAKLKNLEALDL 61
+++ +++LD+S N GS+ + +A+L+NL ++ GC + + G +++ L +D
Sbjct: 26 SIKEVEILDVSDN---PIGSIP-VNIASLSNLTEMRAAGCDLREVSGNVSRCTYLRKIDF 81
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGITT----I 115
S N ++ + L L+ + LSG + LT+L L L ++TLDL + + I
Sbjct: 82 SRNPHIATLPATMKQLRYLKCVALSGCE-LTSLPKNLTLLATIETLDLSKNALESLPSDI 140
Query: 116 QGIQQ 120
G++Q
Sbjct: 141 SGLKQ 145
>gi|46446377|ref|YP_007742.1| hypothetical protein pc0743 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400018|emb|CAF23467.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 765
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 62/124 (50%), Gaps = 9/124 (7%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL---DLSS 63
LQ LDLS N T L L L L L+ L+L CG T GLA L L AL DL+
Sbjct: 384 LQHLDLSHCRNFTDAGLAHLKL--LVALQHLNLSYCGNLTDAGLAHLTPLMALQHLDLNG 441
Query: 64 NYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQGIQ 119
+ L L L +L LQ L+LS N N T GLA+L L+ L+L CG T G+
Sbjct: 442 CHNLTDAGLTHLTSLVVLQYLNLSWNYNFTDAGLAHLTPLMALQHLNLSYCGNFTDAGLA 501
Query: 120 QFTS 123
TS
Sbjct: 502 HLTS 505
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLK---NLE 57
L L LQ LDLS N T L L L L L+ L+L CG T GLA LK L+
Sbjct: 328 LTPLAALQHLDLSHCRNFTDAGLAHLKL--LVALQHLNLSHCGKLTDAGLAHLKLLVALQ 385
Query: 58 ALDLSS-NYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
LDLS + L L L LQ L+LS NLT GLA+L L+ LDL C
Sbjct: 386 HLDLSHCRNFTDAGLAHLKLLVALQHLNLSYCGNLTDAGLAHLTPLMALQHLDLNGCHNL 445
Query: 114 TIQGIQQFTS 123
T G+ TS
Sbjct: 446 TDAGLTHLTS 455
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL---D 60
L ++ L+ S N ++T L L L N NLK L+L C T GLA L L AL D
Sbjct: 257 LNEIEELNFSKNAHLTDAHL--LALKNCENLKVLNLQACHNLTDAGLAHLTPLAALKHLD 314
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLP---NLKTLDLRDCGITTIQG 117
LS L L L LQ LDLS +N T GLA+L L+ L+L CG T G
Sbjct: 315 LSGCELTDDGLVHLTPLAALQHLDLSHCRNFTDAGLAHLKLLVALQHLNLSHCGKLTDAG 374
Query: 118 IQQ 120
+
Sbjct: 375 LAH 377
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 67/132 (50%), Gaps = 20/132 (15%)
Query: 1 LANLRYL---QVLDLSANYNITSGSLTRLGLANLTNL---KKLDLDGCGITTIQGLAKLK 54
LA+L++L Q L+LS G LT GL NLT L + LDL CG T GLA LK
Sbjct: 574 LAHLKFLVALQHLNLS-----HCGKLTDDGLVNLTPLAALRHLDLSHCGKLTGAGLAHLK 628
Query: 55 NLEALDLSSNYYLHGSL--EGLANLTN---LQVLDLSGNQNLTTLGLANLPN---LKTLD 106
L AL N G L GL NL+ LQ LDLS NLT GL NL L+ LD
Sbjct: 629 FLVALQ-HLNLSHCGKLTDAGLVNLSPLMALQHLDLSHCGNLTDAGLVNLSPLMALQHLD 687
Query: 107 LRDCGITTIQGI 118
L CG T G+
Sbjct: 688 LSHCGNLTDDGL 699
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 69/154 (44%), Gaps = 33/154 (21%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L +L LQ L+LS NYN T L L L L+ L+L CG T GLA L +L AL
Sbjct: 453 LTSLVVLQYLNLSWNYNFTDAGLAHL--TPLMALQHLNLSYCGNFTDAGLAHLTSLAALK 510
Query: 60 -------DLSSNYYLHGSL-----------------EGLAN---LTNLQVLDLSGNQNLT 92
+L+ + H L +GLA+ L LQ LDLSG LT
Sbjct: 511 HLDLIGCELTDDGLAHLKLLVALQHLNLSYCGKLTDDGLAHLKLLVALQHLDLSGCDKLT 570
Query: 93 TLGLANLP---NLKTLDLRDCGITTIQGIQQFTS 123
GLA+L L+ L+L CG T G+ T
Sbjct: 571 GAGLAHLKFLVALQHLNLSHCGKLTDDGLVNLTP 604
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY 66
LQ L+LS +T L L L L L+ LDL GC T GLA LK L AL N
Sbjct: 533 LQHLNLSYCGKLTDDGLAHLKL--LVALQHLDLSGCDKLTGAGLAHLKFLVALQ-HLNLS 589
Query: 67 LHGSL--EGLANLTNLQV---LDLSGNQNLTTLGLANLP---NLKTLDLRDCGITTIQGI 118
G L +GL NLT L LDLS LT GLA+L L+ L+L CG T G+
Sbjct: 590 HCGKLTDDGLVNLTPLAALRHLDLSHCGKLTGAGLAHLKFLVALQHLNLSHCGKLTDAGL 649
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 62/118 (52%), Gaps = 15/118 (12%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA-- 58
L+ L LQ LDLS N+T L + L+ L L+ LDL CG T GL LK L A
Sbjct: 652 LSPLMALQHLDLSHCGNLTDAGL--VNLSPLMALQHLDLSHCGNLTDDGLVNLKFLVALQ 709
Query: 59 -LDLSSNYYLHGSL--EGLANLTN---LQVLDLSGNQNLTT-LGLANLPNLKTLDLRD 109
LDLS G+L +GLA+L+ LQ LD S NLT GLA+L +L L D
Sbjct: 710 HLDLSHC----GNLTDDGLAHLSPLIALQHLDRSKYNNLTDGSGLAHLTSLVDLQHLD 763
>gi|392564128|gb|EIW57306.1| L domain-like protein [Trametes versicolor FP-101664 SS1]
Length = 389
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L NL++L L IT ++GL +LK L+ L + SN LEGL L NL+ L +S
Sbjct: 228 GLDALANLEELWLGKNKITQLEGLEELKKLKILSIQSNRIT--KLEGLDGLENLEELYIS 285
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N L GL P L+TLD + I T++ I T+
Sbjct: 286 HNGILKLEGLDKNPKLRTLDAGNNFIETLENISHLTT 322
>gi|254411888|ref|ZP_05025664.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196181610|gb|EDX76598.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 415
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L LTNLK L L IT I L +L NL L L N + LA LTNL+ L+L
Sbjct: 112 PLTELTNLKYLTLRRNQITDICPLTELTNLTELSLEGNQI--ADVNSLAELTNLEFLNLE 169
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQ---GIQQFT 122
NQ T LA L NLK L L D IT I G+Q T
Sbjct: 170 NNQITTISPLAELQNLKRLHLEDNQITDISSLAGLQNLT 208
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 63/142 (44%), Gaps = 25/142 (17%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LA L L+ L+L N IT+ S LA L NLK+L L+ IT I LA L+NL L
Sbjct: 157 LAELTNLEFLNLE-NNQITTIS----PLAELQNLKRLHLEDNQITDISSLAGLQNLTWLH 211
Query: 61 LSSNYYLHGS--------------------LEGLANLTNLQVLDLSGNQNLTTLGLANLP 100
L N S + L+ LTNL+ L+L NQ LA L
Sbjct: 212 LEDNQITDISPLSEFTNLKGLFLVLNQIKDISPLSQLTNLKALELKFNQIQDISPLAELQ 271
Query: 101 NLKTLDLRDCGITTIQGIQQFT 122
NL LDL D IT I + T
Sbjct: 272 NLTWLDLEDNQITDISPLSGLT 293
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L+ LTNLK+L L+ I I LA+L NLE L L+ N S L+ L NL L L+
Sbjct: 310 PLSGLTNLKRLQLNFNQIQDISPLAELTNLETLSLNGNQITDVS--PLSGLQNLNALSLN 367
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGI 112
GNQ L+ L NLK L L + I
Sbjct: 368 GNQITDISPLSGLTNLKVLHLTENPI 393
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LA L+ L LDL N IT S L+ LTNL L L I + L+ L NL+ L
Sbjct: 267 LAELQNLTWLDLEDNQ-ITDIS----PLSGLTNLTFLSLTYNQIQDVSPLSGLTNLKRLQ 321
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
L N+ + LA LTNL+ L L+GNQ L+ L NL L L IT I +
Sbjct: 322 L--NFNQIQDISPLAELTNLETLSLNGNQITDVSPLSGLQNLNALSLNGNQITDISPLSG 379
Query: 121 FT 122
T
Sbjct: 380 LT 381
>gi|328876712|gb|EGG25075.1| hypothetical protein DFA_03321 [Dictyostelium fasciculatum]
Length = 428
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L + L+KL L+ C + +I+ L L L+ L+L+ N + G L L+ TNL L LSG
Sbjct: 33 LKHFIKLEKLSLNNCHLQSIETLPPLPTLKKLELNDNR-ISGGLVALSGFTNLGSLSLSG 91
Query: 88 NQNLT---TLGLANLPNLKTLDLRDCGITTIQGIQQ 120
NQ T L L +L +L+ LDL C +TT++ Q
Sbjct: 92 NQIKTLEDLLPLKHLTSLQYLDLFGCPVTTLKDYSQ 127
>gi|270014512|gb|EFA10960.1| hypothetical protein TcasGA2_TC004120 [Tribolium castaneum]
Length = 399
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 33 NLKKLDLDGCGITTI--QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
+LK+LDL C I+ I +++ NLE LD+S NY +H + + LTNLQ+LD +GN +
Sbjct: 169 SLKRLDLSLCRISYIGPDSFSQIPNLEVLDVSENYLIHLYIATVEPLTNLQILD-AGNNS 227
Query: 91 LTTLGLA 97
L+ G++
Sbjct: 228 LSCDGVS 234
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDL 61
L L+ LDLS N + LT ++T L++L L G G + + L K+L+ LDL
Sbjct: 119 LSALRTLDLSYN---SVQYLTPAWFRDMTALEELYLRGNGFSKLDSGPLFASKSLKRLDL 175
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCG 111
S + + + + NL+VLD+S N L L +A + L L + D G
Sbjct: 176 SLCRISYIGPDSFSQIPNLEVLDVSENY-LIHLYIATVEPLTNLQILDAG 224
>gi|224078762|ref|XP_002335745.1| predicted protein [Populus trichocarpa]
gi|222834731|gb|EEE73194.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI--TTIQGLAKLKNLEA 58
L L++L L+L N N GS + +L L+ LDL GI T L L+
Sbjct: 112 LLELQHLSYLNL--NRNSFEGSSFPYFIGSLKKLRYLDLSSIGIVGTLSNQFWNLSRLQY 169
Query: 59 LDLSSNYYLH-GSLEGLANLTNLQVLDLSGNQNLTTL-----GLANLPNLKTLDLRDC 110
LDLS NYY++ SL+ L+NL +L+ LDLSGN NL+ + + P LK L R+C
Sbjct: 170 LDLSGNYYVNFTSLDFLSNLFSLEYLDLSGN-NLSQVIDWIQTVKKFPFLKILLFRNC 226
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 58/108 (53%), Gaps = 11/108 (10%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTN-LKKLDL---DGCGITTIQGLAKLKNLEALDLS 62
L V+DLS NY +S T L+N +N L LDL DG ++ L+ L LE L LS
Sbjct: 245 LAVIDLSHNYLASS---TFNWLSNFSNNLVDLDLSYNDGVTFKSLDFLSNLFFLEHLQLS 301
Query: 63 SNYYLHGSL-EGLANLTNLQVLDLSGN--QNLTTLGLANLPNLKTLDL 107
L G + E AN+ +L+ LDLS N Q L N+ +L+TLDL
Sbjct: 302 Y-IQLQGLIPEAFANMISLRTLDLSFNELQGLIPDAFTNMTSLRTLDL 348
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 62/150 (41%), Gaps = 34/150 (22%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-------GITTIQGLAKL 53
NL LQ LDLS NY + SL L+NL +L+ LDL G I T++ L
Sbjct: 161 FWNLSRLQYLDLSGNYYVNFTSLD--FLSNLFSLEYLDLSGNNLSQVIDWIQTVKKFPFL 218
Query: 54 K------------------------NLEALDLSSNYYLHGSLEGLANLT-NLQVLDLSGN 88
K +L +DLS NY + L+N + NL LDLS N
Sbjct: 219 KILLFRNCDLSNNSPPSLSSTNSSKSLAVIDLSHNYLASSTFNWLSNFSNNLVDLDLSYN 278
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
+T L L NL L+ +QG+
Sbjct: 279 DGVTFKSLDFLSNLFFLEHLQLSYIQLQGL 308
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 20 SGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEG-LANLT 78
S SL L + NL + +G G LK L LDLSS + G+L NL+
Sbjct: 109 SNSLLELQHLSYLNLNRNSFEGSSFPYFIG--SLKKLRYLDLSS-IGIVGTLSNQFWNLS 165
Query: 79 NLQVLDLSGNQ--NLTTLG-LANLPNLKTLDLRDCG----ITTIQGIQQF 121
LQ LDLSGN N T+L L+NL +L+ LDL I IQ +++F
Sbjct: 166 RLQYLDLSGNYYVNFTSLDFLSNLFSLEYLDLSGNNLSQVIDWIQTVKKF 215
>gi|449087282|ref|YP_007419723.1| hypothetical protein HD73_0623 [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|449021039|gb|AGE76202.1| hypothetical protein HD73_0623 [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 991
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L N++++ L + +IT G L +G LA L +++ L L I+ + L+++K ++ L
Sbjct: 257 LKNIKFISGLRQLKSLSITYGELEDIGPLAELEHIEFLTLRNNKISDLSPLSQMKKIKML 316
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQG 117
DL+SNY ++ L + +L+ L ++ NQ N G+ L N+K L L + G+T I+
Sbjct: 317 DLNSNYI--KDIKPLFTVKSLRTLTVANNQISNDNLAGIEQLKNVKNLSLSNNGLTNIEH 374
Query: 118 I 118
I
Sbjct: 375 I 375
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 21/140 (15%)
Query: 1 LANLRYLQVLDLSANYN------ITSGSLTRLGLAN-------------LTNLKKLDLDG 41
L+ ++ +++LDL++NY T SL L +AN L N+K L L
Sbjct: 307 LSQMKKIKMLDLNSNYIKDIKPLFTVKSLRTLTVANNQISNDNLAGIEQLKNVKNLSLSN 366
Query: 42 CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
G+T I+ + +K L LDL+ N ++E L+ L+ +Q L+L N L++L +
Sbjct: 367 NGLTNIEHITSMKKLVELDLAKNEL--ENIEPLSRLSTVQSLNLEENYISDITPLSHLTD 424
Query: 102 LKTLDLRDCGITTIQGIQQF 121
L L L I ++ +Q+
Sbjct: 425 LYDLKLGSNEIRDVRPVQEL 444
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+KL L+G G+ I+ ++ LK L +++S N + L++L NLQ L+L+
Sbjct: 601 GLEYMTNLEKLTLEGVGLKNIEFISNLKQLNNVNVSHNQI--EDITPLSSLENLQWLNLA 658
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
N + ++ NL +L+L I ++ + Q +
Sbjct: 659 DNHIKDVTVIGSMLNLFSLNLAGNEIRDVRSLIQLGQW 696
>gi|218235426|ref|YP_002365348.1| internalin protein [Bacillus cereus B4264]
gi|218163383|gb|ACK63375.1| internalin protein [Bacillus cereus B4264]
Length = 994
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L N++++ L + +IT G L +G LA L +++ L L I+ + L+++K ++ L
Sbjct: 255 LKNIKFISDLRQLKSLSITYGELEDIGPLAKLEHIEFLTLRNNKISDLSPLSQMKKIKML 314
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQG 117
DL+SNY ++ L + +L+ L ++ NQ N G+ L N+K L L + G+T I+
Sbjct: 315 DLNSNYI--KDIKPLFTVKSLRTLTVANNQISNDNLAGIEQLKNVKNLSLSNNGLTNIEH 372
Query: 118 I 118
I
Sbjct: 373 I 373
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 21/140 (15%)
Query: 1 LANLRYLQVLDLSANYN------ITSGSLTRLGLAN-------------LTNLKKLDLDG 41
L+ ++ +++LDL++NY T SL L +AN L N+K L L
Sbjct: 305 LSQMKKIKMLDLNSNYIKDIKPLFTVKSLRTLTVANNQISNDNLAGIEQLKNVKNLSLSN 364
Query: 42 CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
G+T I+ + +K L LDL+ N ++E L+ L+ +Q L+L N L++L +
Sbjct: 365 NGLTNIEHITSMKKLVELDLAKNEL--ENIEPLSRLSTVQSLNLEENYISDITPLSHLTD 422
Query: 102 LKTLDLRDCGITTIQGIQQF 121
L L L I ++ +Q+
Sbjct: 423 LYDLKLGSNEICDVRPVQEL 442
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 11/126 (8%)
Query: 1 LANLRYLQVLDLSAN--YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L ++ L++L N NIT GL +TNL+ L L+G G+ I+ ++ LK L
Sbjct: 578 LLQIKKLEILKEKGNEIKNIT-------GLEYMTNLENLTLEGVGLKNIEFISNLKQLNN 630
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
+++S N + L++L NLQ L+L+ N + ++ NL +L+L I ++ +
Sbjct: 631 VNVSHNQI--EDITPLSSLENLQWLNLADNHIKDVTVIGSMLNLFSLNLAGNEIRDVRPL 688
Query: 119 QQFTSY 124
Q +
Sbjct: 689 IQLGQW 694
>gi|301095820|ref|XP_002897009.1| protein phosphatase 1 regulatory subunit 7, putative [Phytophthora
infestans T30-4]
gi|262108438|gb|EEY66490.1| protein phosphatase 1 regulatory subunit 7, putative [Phytophthora
infestans T30-4]
Length = 612
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSL-EGLANLTNLQVLDLSGNQ 89
L LK L L+G IT ++ L + L LDL N LHG+ EGL L+NL+VL+L GNQ
Sbjct: 115 LNKLKNLWLNGNRITAVRNLRGCRLLVYLDLGRNK-LHGAASEGLDALSNLEVLNLGGNQ 173
Query: 90 NLTTLG-LANLPNLKTLDLRDCGITTIQGI 118
LT++G L++L L+ L+L + +TT+QG+
Sbjct: 174 -LTSVGNLSHLTKLEELNLSENNLTTLQGV 202
>gi|339487822|ref|YP_004702350.1| hypothetical protein PPS_2921 [Pseudomonas putida S16]
gi|338838665|gb|AEJ13470.1| conserved hypothetical protein [Pseudomonas putida S16]
Length = 1275
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 6 YLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN- 64
+ V LS +YN + L NL +L L C T+ L + + L LDL N
Sbjct: 1018 FTHVQHLSLSYNRSLSQLPAEFHERFPNLNRLLLTDCRFDTVPHLGRPEQLAWLDLEGNR 1077
Query: 65 -YYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI-QGIQQ 120
+ + + L + L VLDLSGN L L L L+TL L DC ++ + QG+ Q
Sbjct: 1078 ITWSTQAQQALNRCSGLNVLDLSGNPLLEAPDLRGLGYLRTLFLNDCALSELPQGLDQ 1135
>gi|301101126|ref|XP_002899652.1| protein phosphatase 1 regulatory subunit, putative [Phytophthora
infestans T30-4]
gi|262103960|gb|EEY62012.1| protein phosphatase 1 regulatory subunit, putative [Phytophthora
infestans T30-4]
Length = 332
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G+ NL NLK LDL I I L L LE L +++N + G+ LT L+ LDL
Sbjct: 102 GVQNLVNLKVLDLSFNEIRVIPDLNHLTKLEELYVANNKL--KKISGIETLTTLKKLDLG 159
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ T GL L LK L L ITTIQG+++
Sbjct: 160 ANRLRTIEGLDGLTELKELWLGKNKITTIQGLEKLAK 196
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +L NL +L + + ++ +A L +LE L+L N +LEG+ NL NL+VLDLS
Sbjct: 58 GLGSLPNLMRLHVRSNLLQSMASVASLVHLEHLELYDNQI--QTLEGVQNLVNLKVLDLS 115
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ L +L L+ L + + + I GI+ T+
Sbjct: 116 FNEIRVIPDLNHLTKLEELYVANNKLKKISGIETLTT 152
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 63/139 (45%), Gaps = 28/139 (20%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN-- 64
L+ LDL AN T GL LT LK+L L ITTIQGL KL L+ + + SN
Sbjct: 153 LKKLDLGANRLRTIE-----GLDGLTELKELWLGKNKITTIQGLEKLAKLKIISVQSNRV 207
Query: 65 ---------------YYLHGSLEGLAN---LTNLQVLDLSGNQ--NLTTLGLANLPNLKT 104
Y H +E + N LT+L +D +GN+ N+ T LA L L+
Sbjct: 208 VKISGFATNFELEELYLSHNGIEKIENVDHLTHLTTMDFAGNRITNIPT-TLAALTQLED 266
Query: 105 LDLRDCGITTIQGIQQFTS 123
L L D I ++ S
Sbjct: 267 LWLNDNQIAQYADVEHLMS 285
>gi|224097947|ref|XP_002334582.1| predicted protein [Populus trichocarpa]
gi|222873265|gb|EEF10396.1| predicted protein [Populus trichocarpa]
Length = 1086
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI--TTIQGLAKLKNLEA 58
L L++L L+L N N GS + +L L+ LDL GI T L L+
Sbjct: 90 LLELQHLSYLNL--NRNSFEGSSFPYFIGSLKKLRYLDLSSIGIVGTLSNQFWNLSRLQY 147
Query: 59 LDLSSNYYLH-GSLEGLANLTNLQVLDLSGNQNLTTL-----GLANLPNLKTLDLRDC 110
LDLS NYY++ SL+ L+NL +L+ LDLSGN NL+ + + P LK L R+C
Sbjct: 148 LDLSGNYYVNFTSLDFLSNLFSLEYLDLSGN-NLSQVIDWIQTVKKFPFLKILLFRNC 204
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 58/108 (53%), Gaps = 11/108 (10%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTN-LKKLDL---DGCGITTIQGLAKLKNLEALDLS 62
L V+DLS NY +S T L+N +N L LDL DG ++ L+ L LE L LS
Sbjct: 223 LAVIDLSHNYLASS---TFNWLSNFSNNLVDLDLSYNDGVTFKSLDFLSNLFFLEHLQLS 279
Query: 63 SNYYLHGSL-EGLANLTNLQVLDLSGN--QNLTTLGLANLPNLKTLDL 107
L G + E AN+ +L+ LDLS N Q L N+ +L+TLDL
Sbjct: 280 Y-IQLQGLIPEAFANMISLRTLDLSFNELQGLIPDAFTNMTSLRTLDL 326
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 62/150 (41%), Gaps = 34/150 (22%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-------GITTIQGLAKL 53
NL LQ LDLS NY + SL L +NL +L+ LDL G I T++ L
Sbjct: 139 FWNLSRLQYLDLSGNYYVNFTSLDFL--SNLFSLEYLDLSGNNLSQVIDWIQTVKKFPFL 196
Query: 54 K------------------------NLEALDLSSNYYLHGSLEGLANLT-NLQVLDLSGN 88
K +L +DLS NY + L+N + NL LDLS N
Sbjct: 197 KILLFRNCDLSNNSPPSLSSTNSSKSLAVIDLSHNYLASSTFNWLSNFSNNLVDLDLSYN 256
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
+T L L NL L+ +QG+
Sbjct: 257 DGVTFKSLDFLSNLFFLEHLQLSYIQLQGL 286
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 55/111 (49%), Gaps = 11/111 (9%)
Query: 20 SGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEG-LANLT 78
S SL L + NL + +G G LK L LDLSS + G+L NL+
Sbjct: 87 SNSLLELQHLSYLNLNRNSFEGSSFPYFIG--SLKKLRYLDLSS-IGIVGTLSNQFWNLS 143
Query: 79 NLQVLDLSGNQ--NLTTLG-LANLPNLKTLDLRDCG----ITTIQGIQQFT 122
LQ LDLSGN N T+L L+NL +L+ LDL I IQ +++F
Sbjct: 144 RLQYLDLSGNYYVNFTSLDFLSNLFSLEYLDLSGNNLSQVIDWIQTVKKFP 194
>gi|46446776|ref|YP_008141.1| hypothetical protein pc1142 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400417|emb|CAF23866.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 590
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L L LQ LDLS +N+T L L L L+ L L C T+ GLA L +L AL
Sbjct: 296 LTTLTALQHLDLSGCWNLTDSGLVHL--TPLVGLQHLGLSDCENLTVAGLAHLTSLTALQ 353
Query: 60 --DLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
DL + Y L L L LT LQ LDLS NLT GLA+L L+ L+L C
Sbjct: 354 HLDLRNCYNLTDAGLAHLTPLTALQHLDLSCCYNLTDAGLAHLTPLTALQHLNLCCCRKL 413
Query: 114 TIQGIQQFTS 123
T G+ T
Sbjct: 414 TDAGLAHLTP 423
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L +L LQ LDL YN+T L L LT L+ LDL C T GLA L L AL
Sbjct: 346 LTSLTALQHLDLRNCYNLTDAGLAHL--TPLTALQHLDLSCCYNLTDAGLAHLTPLTALQ 403
Query: 61 ----LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKT---LDLRDCGIT 113
L L LT LQ LDLS NLT GLA+L L L+L +C
Sbjct: 404 HLNLCCCRKLTDAGLAHLTPLTALQHLDLSYCYNLTDAGLAHLTPLTALLHLNLSECWKL 463
Query: 114 TIQGIQQFTS 123
T G+ T
Sbjct: 464 TGAGLAHLTP 473
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD---LSS 63
++ L+ N ++T+ L L L + N+K L C T GLA L L AL LS
Sbjct: 227 IEALNFLENTHLTNAHL--LALKDCKNVKVLYFKKCRDVTDAGLAHLTPLTALQHLGLSD 284
Query: 64 NYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQGIQ 119
L L L LT LQ LDLSG NLT GL +L L+ L L DC T+ G+
Sbjct: 285 CENLTDAGLAHLTTLTALQHLDLSGCWNLTDSGLVHLTPLVGLQHLGLSDCENLTVAGLA 344
Query: 120 QFTS 123
TS
Sbjct: 345 HLTS 348
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNL---E 57
L L LQ L LS N+T L L LT L+ LDL GC T GL L L +
Sbjct: 271 LTPLTALQHLGLSDCENLTDAGLAHL--TTLTALQHLDLSGCWNLTDSGLVHLTPLVGLQ 328
Query: 58 ALDLSSNYYLHGSLEGLANLTNL---QVLDLSGNQNLTTLGLANLPN---LKTLDLRDCG 111
L LS L ++ GLA+LT+L Q LDL NLT GLA+L L+ LDL C
Sbjct: 329 HLGLSDCENL--TVAGLAHLTSLTALQHLDLRNCYNLTDAGLAHLTPLTALQHLDLSCCY 386
Query: 112 ITTIQGIQQFTS 123
T G+ T
Sbjct: 387 NLTDAGLAHLTP 398
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 64/155 (41%), Gaps = 34/155 (21%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L L LQ LDLS YN+T L L LT L L+L C T GLA L L AL
Sbjct: 421 LTPLTALQHLDLSYCYNLTDAGLAHL--TPLTALLHLNLSECWKLTGAGLAHLTPLVALQ 478
Query: 60 --DLSS-NYYLHGSLEGLANLTNLQ-------------------------VLDLSGNQNL 91
+LS N L LA LT LQ LDL G NL
Sbjct: 479 HLNLSKCNNLTDAGLVHLAPLTALQHLNLSWCKKFTDAGLAHLTLLTALQSLDLIGCNNL 538
Query: 92 TTLGLANLPN---LKTLDLRDCGITTIQGIQQFTS 123
T GL +L L+ LDL C T G+++F +
Sbjct: 539 TDAGLVHLTPLTALQYLDLIGCKNLTDAGLERFKT 573
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 55/112 (49%), Gaps = 12/112 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNL---E 57
L L LQ L+LS N+T L L A LT L+ L+L C T GLA L L +
Sbjct: 471 LTPLVALQHLNLSKCNNLTDAGLVHL--APLTALQHLNLSWCKKFTDAGLAHLTLLTALQ 528
Query: 58 ALDL-SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG------LANLPNL 102
+LDL N L L LT LQ LDL G +NLT G LA LPNL
Sbjct: 529 SLDLIGCNNLTDAGLVHLTPLTALQYLDLIGCKNLTDAGLERFKTLAALPNL 580
>gi|294656646|ref|XP_458939.2| DEHA2D10934p [Debaryomyces hansenii CBS767]
gi|199431629|emb|CAG87099.2| DEHA2D10934p [Debaryomyces hansenii CBS767]
Length = 373
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 28 LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L L NLK L+L G I I + L KL NL+ L L N LE ++NLTNL+VL +
Sbjct: 190 LETLQNLKNLELGGNKIEVISETLDKLVNLQQLWLGKNKI--EKLENMSNLTNLRVLSIQ 247
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
N+ GL NL NL+ L L GIT I+ + +
Sbjct: 248 SNRITKIEGLENLVNLEELYLSHNGITKIENLDK 281
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 13/110 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
++NL L+VL +I S +T++ GL NL NL++L L GIT I+ L K NL+ L
Sbjct: 235 MSNLTNLRVL------SIQSNRITKIEGLENLVNLEELYLSHNGITKIENLDKNANLQVL 288
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLG--LANLPNLKTL 105
D++SN +L+ L +LT L S N+ + +G L LP L T+
Sbjct: 289 DVTSNRL--TTLDNLNHLTKLTDFWCSYNKISSFEEIGKELGKLPELDTV 336
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L L NL++L L I ++ ++ L NL L + SN +EGL NL NL+ L LS
Sbjct: 213 LDKLVNLQQLWLGKNKIEKLENMSNLTNLRVLSIQSNRI--TKIEGLENLVNLEELYLSH 270
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N L NL+ LD+ +TT+ + T
Sbjct: 271 NGITKIENLDKNANLQVLDVTSNRLTTLDNLNHLTK 306
>gi|357140358|ref|XP_003571736.1| PREDICTED: uncharacterized protein LOC100820916 [Brachypodium
distachyon]
Length = 571
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 10/125 (8%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
+A L+ L+LSAN+ +++ GSL + L LDL I I+GL +L L
Sbjct: 348 IAPFSSLRALNLSANFIVHVSPGSLPK-------GLHSLDLSRNKIANIEGLRELTKLRV 400
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L+LS N + GL+N T ++ L L+GN+ GL L L LDL +T + +
Sbjct: 401 LNLSYNRIARIA-HGLSNCTAIRELYLAGNKISDVEGLHRLLKLAVLDLGFNKVTMAKAL 459
Query: 119 QQFTS 123
Q +
Sbjct: 460 GQLVA 464
Score = 41.6 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L L L+VL+LS N + R+ GL+N T +++L L G I+ ++GL +L L
Sbjct: 392 LRELTKLRVLNLSYN------RIARIAHGLSNCTAIRELYLAGNKISDVEGLHRLLKLAV 445
Query: 59 LDLSSNYYLHGSLEG--LANLTNLQVLDLSGNQNLTTLGLANLPNLKT 104
LDL N G +AN +L L+L GN +G ++ L T
Sbjct: 446 LDLGFNKVTMAKALGQLVANYHSLLALNLVGNPVQANVGDDDMRKLVT 493
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 21/104 (20%)
Query: 39 LDGCGITTIQGLAKLKNLEALDLSSNYYLH---GSL-----------------EGLANLT 78
+ G G+ + +A +L AL+LS+N+ +H GSL EGL LT
Sbjct: 337 ISGMGLKVVPMIAPFSSLRALNLSANFIVHVSPGSLPKGLHSLDLSRNKIANIEGLRELT 396
Query: 79 NLQVLDLSGNQ-NLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
L+VL+LS N+ GL+N ++ L L I+ ++G+ +
Sbjct: 397 KLRVLNLSYNRIARIAHGLSNCTAIRELYLAGNKISDVEGLHRL 440
>gi|334183411|ref|NP_001185260.1| receptor like protein 9 [Arabidopsis thaliana]
gi|332195390|gb|AEE33511.1| receptor like protein 9 [Arabidopsis thaliana]
Length = 1029
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQGLAKLKNLEAL 59
L NLR L++LDLS N + G + LAN NL+ LD+ + + +GL +LKNL L
Sbjct: 272 LINLRNLELLDLSKNQFV--GPVP--DLANFHNLQGLDMSDNKFSGSNKGLCQLKNLREL 327
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
DLS N + + +LT LQVLD+S N
Sbjct: 328 DLSQNKFTGQFPQCFDSLTQLQVLDISSN 356
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 68/141 (48%), Gaps = 36/141 (25%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLD------GCGITTIQGLAKLK 54
L +L L++LDLS N + +G + GLA L L LDL G + +LK
Sbjct: 172 LKDLSNLELLDLSGN--LLNGPVP--GLAVLHKLHALDLSDNTFSGSLGREGYKSFERLK 227
Query: 55 NLEALDLSSN------------------YYLHG-SLEG------LANLTNLQVLDLSGNQ 89
NLE LD+S N LHG ++EG L NL NL++LDLS NQ
Sbjct: 228 NLEILDISENGVNNTVLPFINTASSLKTLILHGNNMEGTFPMKELINLRNLELLDLSKNQ 287
Query: 90 NLTTLG-LANLPNLKTLDLRD 109
+ + LAN NL+ LD+ D
Sbjct: 288 FVGPVPDLANFHNLQGLDMSD 308
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 50/107 (46%), Gaps = 26/107 (24%)
Query: 44 ITTIQGLAKLKNLEALDLSSNYY------------------LHG-SLEG------LANLT 78
I + L KLK LE LD+ +N LHG ++EG L +L+
Sbjct: 117 IHGYKSLGKLKKLEILDMGNNEVNNSVLPFLNAASSLRTLILHGNNMEGTFPMKELKDLS 176
Query: 79 NLQVLDLSGN-QNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
NL++LDLSGN N GLA L L LDL D + G + + S+
Sbjct: 177 NLELLDLSGNLLNGPVPGLAVLHKLHALDLSDNTFSGSLGREGYKSF 223
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 64/151 (42%), Gaps = 35/151 (23%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNLEA 58
LAN LQ LD+S N SGS GL L NL++LDL T Q L L+
Sbjct: 295 LANFHNLQGLDMSDNK--FSGS--NKGLCQLKNLRELDLSQNKFTGQFPQCFDSLTQLQV 350
Query: 59 LDLSSNYY-----------------------LHG--SLEGLANLTNLQVLDLSGNQNLTT 93
LD+SSN + G SLE +ANL+ L+V LS NL
Sbjct: 351 LDISSNNFNGTVPSLIRNLDSVEYLALSDNEFKGFFSLELIANLSKLKVFKLSSRSNLLR 410
Query: 94 LGLANL--PN--LKTLDLRDCGITTIQGIQQ 120
L + P L ++L++C + + Q
Sbjct: 411 LKKLSSLQPKFQLSVIELQNCNLENVPSFIQ 441
>gi|345326670|ref|XP_003431071.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 1
[Ornithorhynchus anatinus]
Length = 1906
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L N + LQ +D+ N ++ + NL N+ L L+ +T++ GL N+ L+
Sbjct: 766 LGNCKDLQYIDVQEN------NIQHINCENLENICILLLNKNQLTSLHGLDGCSNIRNLE 819
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
LS N + GL +L NLQ L ++ NQ +++ GL P L LD ++ ++GI+
Sbjct: 820 LSYNKITQ--IGGLESLKNLQQLSVAHNQLISSKGLGEAPTLMFLDCSYNHLSELEGIE 876
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 62/140 (44%), Gaps = 27/140 (19%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDL 61
NL + +L L+ N LT L GL +N++ L+L IT I GL LKNL+ L +
Sbjct: 789 NLENICILLLNKN------QLTSLHGLDGCSNIRNLELSYNKITQIGGLESLKNLQQLSV 842
Query: 62 SSNY-------------------YLHGS-LEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
+ N Y H S LEG+ N LQ L L GN L N
Sbjct: 843 AHNQLISSKGLGEAPTLMFLDCSYNHLSELEGIENCGLLQSLKLQGNNLSEVPRLENQVL 902
Query: 102 LKTLDLRDCGITTIQGIQQF 121
L+ L L D I+T++ + +
Sbjct: 903 LRELYLDDNNISTVENLSSY 922
>gi|398916168|ref|ZP_10657637.1| hypothetical protein PMI29_03497 [Pseudomonas sp. GM49]
gi|398175348|gb|EJM63108.1| hypothetical protein PMI29_03497 [Pseudomonas sp. GM49]
Length = 2222
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQ-GLAKLKNLEALDLSSNYYL--HGSLEGLANLTNLQVLD 84
++ T L+ LDL CG+T I G L L LDLSSN + G +GL L L+ LD
Sbjct: 1405 ISRFTELQTLDLRDCGLTEIPIGPNDLGKLTQLDLSSNGIVVDSGVQQGLDGLRMLEYLD 1464
Query: 85 LSGNQNLTTLGLANLPNLKTLDLR 108
LS N L TL ++ + +LK L+LR
Sbjct: 1465 LSNNP-LNTLDVSAMSHLKALNLR 1487
>gi|158335132|ref|YP_001516304.1| hypothetical protein AM1_1973 [Acaryochloris marina MBIC11017]
gi|158305373|gb|ABW26990.1| leucine-rich-repeat protein [Acaryochloris marina MBIC11017]
Length = 842
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTIQ-GLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
++ L NL+ L L G +TTI +++LKNL+ L L N L + ++ L NLQ L L
Sbjct: 34 AISQLKNLQTLSLQGNQLTTIPDAISQLKNLQTLSLQRNQ-LTAIPDAISQLKNLQTLSL 92
Query: 86 SGNQNLTTL--GLANLPNLKTLDLRDCGITTI 115
GNQ LT + + L NL+TLDL D +TTI
Sbjct: 93 QGNQ-LTAIPDAIGQLVNLQTLDLHDNQLTTI 123
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 63/118 (53%), Gaps = 9/118 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQ-GLAKLKNLEAL 59
++ L+ LQ L L N T ++ L NL+ L L +T I +++LKNL+ L
Sbjct: 35 ISQLKNLQTLSLQGNQLTTIPD----AISQLKNLQTLSLQRNQLTAIPDAISQLKNLQTL 90
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
L N L + + L NLQ LDL NQ LTT+ ++ L NL+ LDLR+ +TTI
Sbjct: 91 SLQGNQ-LTAIPDAIGQLVNLQTLDLHDNQ-LTTIPDTISQLVNLQELDLRNDQLTTI 146
>gi|326917825|ref|XP_003205195.1| PREDICTED: leucine-rich repeat and coiled-coil domain-containing
protein 1-like [Meleagris gallopavo]
Length = 1024
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 18 ITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANL 77
+ G + L ++ ++L L++ I I+GL L+NL+ LDLSSN +EGL+ L
Sbjct: 14 VDKGVRSLLEVSLSSDLHTLNMHCNRIARIEGLGHLRNLQHLDLSSNQIRR--MEGLSAL 71
Query: 78 TNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
+L+ L+LS N GL L NL TL+L I + G Q
Sbjct: 72 ESLRSLNLSCNLITAVEGLEKLFNLTTLNLSYNRIHNLSGFQ 113
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 4 LRYLQVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+R L + LS++ + + R+ GL +L NL+ LDL I ++GL+ L++L +L
Sbjct: 18 VRSLLEVSLSSDLHTLNMHCNRIARIEGLGHLRNLQHLDLSSNQIRRMEGLSALESLRSL 77
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANL----PNLKTLDLRDCGITTI 115
+LS N L ++EGL L NL L+LS N+ G L + +DLR I I
Sbjct: 78 NLSCN--LITAVEGLEKLFNLTTLNLSYNRIHNLSGFQCLHGTHHKISCIDLRSNCINNI 135
Query: 116 QGIQQFT 122
+ Q T
Sbjct: 136 NHLLQCT 142
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 36 KLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG 95
+L L G+ ++ ++ +L L++ N +EGL +L NLQ LDLS NQ G
Sbjct: 10 ELSLVDKGVRSLLEVSLSSDLHTLNMHCNRI--ARIEGLGHLRNLQHLDLSSNQIRRMEG 67
Query: 96 LANLPNLKTLDLRDCGITTIQGIQQF 121
L+ L +L++L+L IT ++G+++
Sbjct: 68 LSALESLRSLNLSCNLITAVEGLEKL 93
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 49/148 (33%), Positives = 64/148 (43%), Gaps = 46/148 (31%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L +LR LQ LDLS+N + R+ GL+ L +L+ L+L IT ++GL KL NL L
Sbjct: 46 LGHLRNLQHLDLSSN------QIRRMEGLSALESLRSLNLSCNLITAVEGLEKLFNLTTL 99
Query: 60 DLSSNYY--------LHGS-----------------------LEGLANLTNLQVLDLSGN 88
+LS N LHG+ +GL LTNL L+ GN
Sbjct: 100 NLSYNRIHNLSGFQCLHGTHHKISCIDLRSNCINNINHLLQCTKGLQCLTNL-TLEKYGN 158
Query: 89 QNLTTLG-------LANLPNLKTLDLRD 109
N L LP L LD R+
Sbjct: 159 TNPVCYAAGYRETVLQALPQLAVLDGRN 186
>gi|332661885|ref|YP_004451355.1| small GTP-binding protein [Haliscomenobacter hydrossis DSM 1100]
gi|332337382|gb|AEE54482.1| small GTP-binding protein [Haliscomenobacter hydrossis DSM 1100]
Length = 1141
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L LR+LQ L+ S N N T S L+NL+NL +L L + + L+ L NL +L+
Sbjct: 349 LTTLRHLQNLN-SINLNKTHASDLS-ALSNLSNLSELYLSDTQASDLSALSALFNLNSLN 406
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
LS Y L LANL NL LDL + LANL NL +LDL D + + +
Sbjct: 407 LS--YTQVSGLSALANLQNLSSLDLGDTEVFDLSPLANLQNLSSLDLSDTEVVDLSPM 462
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L+ L NL L+L ++ + LA L+NL +LDL L LANL NL LDLS
Sbjct: 395 ALSALFNLNSLNLSYTQVSGLSALANLQNLSSLDLGDTEVF--DLSPLANLQNLSSLDLS 452
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGI 112
+ + + NL LK L+L I
Sbjct: 453 DTEVVDLSPMINLSKLKYLNLSSTPI 478
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 50/122 (40%), Gaps = 44/122 (36%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
NL Y QV LSA LANL NL LDL + + LA L+NL +LDLS
Sbjct: 406 NLSYTQVSGLSA-------------LANLQNLSSLDLGDTEVFDLSPLANLQNLSSLDLS 452
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLAN---------------LPNLKTLDL 107
+ +V+DLS NL+ L N LP L LDL
Sbjct: 453 ----------------DTEVVDLSPMINLSKLKYLNLSSTPILHLPFELLFLPKLTKLDL 496
Query: 108 RD 109
RD
Sbjct: 497 RD 498
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L L NL L L ++ + LA L NL +L LS Y L L+ L+NL LDLS
Sbjct: 241 SLRPLINLSDLKLSSTEVSDLSVLAHLHNLSSLHLS--YTQVSDLSALSALSNLSFLDLS 298
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
Q L+ L NL L+L + I+ + ++
Sbjct: 299 DTQVSDLSALSALYNLSFLNLSNTQISDLSALRH 332
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 40/149 (26%)
Query: 1 LANLRYLQVLD--------LSANYNITSGSLTRLGLANLTNLKKL------DLDGCGITT 46
L+NL +L + D LSA YN++ +L+ +++L+ L+ L DL +T
Sbjct: 289 LSNLSFLDLSDTQVSDLSALSALYNLSFLNLSNTQISDLSALRHLLNLSIIDLSSTELTD 348
Query: 47 IQGLAKLKNLEALDLSSNYYLHGS-LEGLANLTNLQVLDLSGNQ-----------NLTTL 94
+ L L+NL +++L+ H S L L+NL+NL L LS Q NL +L
Sbjct: 349 LTTLRHLQNLNSINLNKT---HASDLSALSNLSNLSELYLSDTQASDLSALSALFNLNSL 405
Query: 95 -----------GLANLPNLKTLDLRDCGI 112
LANL NL +LDL D +
Sbjct: 406 NLSYTQVSGLSALANLQNLSSLDLGDTEV 434
>gi|294460870|gb|ADE76008.1| unknown [Picea sitchensis]
Length = 170
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 27 GLANLTNLKKLDLDGC-GITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
GL +L L++LD+ GC + + L LK+L++L S Y L S+ GLA+L+ LQ L +
Sbjct: 57 GLPDLAGLEQLDISGCEEVEELPSLQTLKSLKSLKASKCYKLK-SINGLADLSRLQRLYV 115
Query: 86 SGNQNLTTL-GLANLPNLKTLDLRDC 110
+ L G+ N +L+ LD RDC
Sbjct: 116 RDCHEIRELPGVENCRSLEALDARDC 141
>gi|62319758|dbj|BAD93741.1| hypothetical protein [Arabidopsis thaliana]
Length = 661
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQGLAKLKNLEAL 59
L NLR L++LDLS N + G + LAN NL+ LD+ + + +GL +LKNL L
Sbjct: 272 LINLRNLELLDLSKNQFV--GPVP--DLANFHNLQGLDMSDNKFSGSNKGLCQLKNLREL 327
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
DLS N + + +LT LQVLD+S N
Sbjct: 328 DLSQNKFTGQFPQCFDSLTQLQVLDISSN 356
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 68/141 (48%), Gaps = 36/141 (25%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLD------GCGITTIQGLAKLK 54
L +L L++LDLS N + +G + GLA L L LDL G + +LK
Sbjct: 172 LKDLSNLELLDLSGN--LLNGPVP--GLAVLHKLHALDLSDNTFSGSLGREGYKSFERLK 227
Query: 55 NLEALDLSSN------------------YYLHG-SLEG------LANLTNLQVLDLSGNQ 89
NLE LD+S N LHG ++EG L NL NL++LDLS NQ
Sbjct: 228 NLEILDISENGVNNTVLPFINTASSLKTLILHGNNMEGTFPMKELINLRNLELLDLSKNQ 287
Query: 90 NLTTLG-LANLPNLKTLDLRD 109
+ + LAN NL+ LD+ D
Sbjct: 288 FVGPVPDLANFHNLQGLDMSD 308
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 50/107 (46%), Gaps = 26/107 (24%)
Query: 44 ITTIQGLAKLKNLEALDLSSNYY------------------LHG-SLEG------LANLT 78
I + L KLK LE LD+ +N LHG ++EG L +L+
Sbjct: 117 IHGYKSLGKLKKLEILDMGNNEVNNSVLPFLNAASSLRTLILHGNNMEGTFPMKELKDLS 176
Query: 79 NLQVLDLSGN-QNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
NL++LDLSGN N GLA L L LDL D + G + + S+
Sbjct: 177 NLELLDLSGNLLNGPVPGLAVLHKLHALDLSDNTFSGSLGREGYKSF 223
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 64/151 (42%), Gaps = 35/151 (23%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNLEA 58
LAN LQ LD+S N SGS GL L NL++LDL T Q L L+
Sbjct: 295 LANFHNLQGLDMSDNK--FSGS--NKGLCQLKNLRELDLSQNKFTGQFPQCFDSLTQLQV 350
Query: 59 LDLSSNYY-----------------------LHG--SLEGLANLTNLQVLDLSGNQNLTT 93
LD+SSN + G SLE +ANL+ L+V LS NL
Sbjct: 351 LDISSNNFNGTVPSLIRNLDSVEYLALSDNEFKGFFSLELIANLSKLKVFKLSSRSNLLR 410
Query: 94 LGLANL--PN--LKTLDLRDCGITTIQGIQQ 120
L + P L ++L++C + + Q
Sbjct: 411 LKKLSSLQPKFQLSVIELQNCNLENVPSFIQ 441
>gi|303234606|ref|ZP_07321240.1| leucine Rich repeat protein [Finegoldia magna BVS033A4]
gi|302494269|gb|EFL54041.1| leucine Rich repeat protein [Finegoldia magna BVS033A4]
Length = 1988
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 3 NLRYLQVLDLSA--------NYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLK 54
NL Q+ D SA + N+ + +T++ ++ LTNL +L + G+ +I ++KL
Sbjct: 718 NLENNQIEDASAITDLSKLQSLNLNNNKITKINVSKLTNLTELYISQNGLESIDSISKLM 777
Query: 55 NLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITT 114
L ++LS N S+E L +L L +L+LS NQ + NL L LD+ I
Sbjct: 778 KLNDVNLSENKLT--SVEALKDLKELGMLNLSSNQIKDIAPIKNLAKLYNLDVHSNPIKD 835
Query: 115 I 115
I
Sbjct: 836 I 836
>gi|357120486|ref|XP_003561958.1| PREDICTED: uncharacterized protein LOC100843628 [Brachypodium
distachyon]
Length = 619
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 7 LQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN 64
L+ ++LS N+ +I GSL + L LDL I+T GL +L L L LS N
Sbjct: 399 LRAVNLSGNFIAHIAPGSLPK-------GLHSLDLSRNSISTTDGLRELTRLRVLSLSYN 451
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
+ GL+N T ++ L L+GN+ GL L L LDL ITT +G+ Q +
Sbjct: 452 R-ISRIGHGLSNCTAIRELYLAGNKISDVEGLHRLLKLAVLDLSFNKITTAKGLGQLVA 509
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L L L+VL LS N ++R+G L+N T +++L L G I+ ++GL +L L
Sbjct: 437 LRELTRLRVLSLSYN------RISRIGHGLSNCTAIRELYLAGNKISDVEGLHRLLKLAV 490
Query: 59 LDLSSNYYLHGSLEG--LANLTNLQVLDLSGNQNLTTLG 95
LDLS N G +AN +L+ L+L GN T +G
Sbjct: 491 LDLSFNKITTAKGLGQLVANYNSLRALNLLGNPVQTNVG 529
>gi|296225393|ref|XP_002758465.1| PREDICTED: nischarin [Callithrix jacchus]
Length = 1504
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY 66
L LDLS N S S + + ++ LDL G+ + L L NL LDLS N
Sbjct: 289 LTTLDLSHN----SISEIDESVKLIPKIEFLDLSHNGLLVVDNLQHLYNLVHLDLSYNKL 344
Query: 67 LHGSLEGL-ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
S+EGL L N++ L+L+GN + GL L +L TLDLRD + ++ ++ S
Sbjct: 345 --SSMEGLHTKLGNIKTLNLAGNLLESLSGLHKLYSLVTLDLRDNRVEQMEEVRSIGS 400
>gi|145517951|ref|XP_001444853.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412286|emb|CAK77456.1| unnamed protein product [Paramecium tetraurelia]
Length = 1334
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
NLK L L GIT I+GL L LE L+L+ N L L GL TNL+ L +S N
Sbjct: 53 FKNLKSLTLINVGITVIEGLDDLNKLEELNLNENQIL--KLSGLKGTTNLRALYISHNAI 110
Query: 91 LTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
GL L L+TL L D I TIQ + Q
Sbjct: 111 QKLEGLEQLTKLETLWLCDNKIDTIQNLDQ 140
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 1 LANLRYLQVLDLSAN--YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L N++YL+ L+L N + I G++NL NL +L L+ I ++ LK+L
Sbjct: 916 LDNMQYLKKLELGGNKIFQID-------GISNLINLMQLSLEDNAILNLKEFPDLKSLME 968
Query: 59 LDLSSNYYL-HGSLEGLANLTNLQVLDLSGNQ-----NLTTLGLANLPNLKTLDLRDCGI 112
+ L +N + + +L L +LDLSGN N + L +P LK LD GI
Sbjct: 969 IYLGNNNITNQKEINNIKHLQKLIILDLSGNPFARDTNYRSYVLYIIPKLKVLD----GI 1024
Query: 113 TTIQGIQQFTS 123
+ QQ
Sbjct: 1025 SIEASEQQMAK 1035
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Query: 18 ITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
IT L+ + GL L L+ L+L IT I + LE L+L N + ++ L N
Sbjct: 861 ITHQKLSSMKGLEGLVQLRHLNLGHNKITQITSIQDSVLLEELNLEKNSIIQ--IQELDN 918
Query: 77 LTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
+ L+ L+L GN+ G++NL NL L L D I ++ S
Sbjct: 919 MQYLKKLELGGNKIFQIDGISNLINLMQLSLEDNAILNLKEFPDLKS 965
>gi|260817742|ref|XP_002603744.1| hypothetical protein BRAFLDRAFT_158323 [Branchiostoma floridae]
gi|229289067|gb|EEN59755.1| hypothetical protein BRAFLDRAFT_158323 [Branchiostoma floridae]
Length = 285
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 58/125 (46%), Gaps = 14/125 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQ--GLAKLKNLEA 58
NL LQ LD+S N ITS + ANL LK LDL ITTIQ AKL L
Sbjct: 35 FVNLSRLQELDISNN-QITS--IPSFAFANLPQLKSLDLSNNQITTIQADAFAKLSQLRK 91
Query: 59 LDLSSN----YYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGI 112
L LS N Y H GL L L LS NQ + + ++ L+ LDL I
Sbjct: 92 LSLSYNRIAKIYQHAFPAGLLELKQ---LTLSNNQIKIIEPKTITHIHLLRQLDLSSNQI 148
Query: 113 TTIQG 117
+TIQ
Sbjct: 149 STIQP 153
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 56 LEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGIT 113
++ L+L+SN NL+ LQ LD+S NQ ++ + ANLP LK+LDL + IT
Sbjct: 17 IKQLNLTSNMITSIQSSAFVNLSRLQELDISNNQITSIPSFAFANLPQLKSLDLSNNQIT 76
Query: 114 TIQG 117
TIQ
Sbjct: 77 TIQA 80
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 17 NITSGSLTRL---GLANLTNLKKLDLDGCGITTIQ--GLAKLKNLEALDLSSNYYLHGSL 71
N+TS +T + NL+ L++LD+ IT+I A L L++LDLS+N
Sbjct: 21 NLTSNMITSIQSSAFVNLSRLQELDISNNQITSIPSFAFANLPQLKSLDLSNNQITTIQA 80
Query: 72 EGLANLTNLQVLDLSGNQ 89
+ A L+ L+ L LS N+
Sbjct: 81 DAFAKLSQLRKLSLSYNR 98
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 54/110 (49%), Gaps = 17/110 (15%)
Query: 18 ITSGSLTRLGLANLTNLKKLDLDGCGITTIQ-GLAKL-KNLEALDLSSNYYLH---GSLE 72
I ++T + L L++LDL I+TIQ G KL L+ L LS N G+ E
Sbjct: 127 IEPKTITHIHL-----LRQLDLSSNQISTIQPGTFKLIYTLQKLHLSYNQISKIQSGTFE 181
Query: 73 GLANLTNLQVLDLSGNQ----NLTTLGLANLPNLKTLDLRDCGITTIQGI 118
GL L +L DLS NQ + + ANL LK LDLR ++ I +
Sbjct: 182 GLHILRHL---DLSFNQITITKIQSDAFANLHKLKELDLRSNNMSVIPPL 228
>gi|427735495|ref|YP_007055039.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
7116]
gi|427370536|gb|AFY54492.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
7116]
Length = 396
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L++L NL KL+L I+ I+ +A L +L +LDL N +E L+NLTNL L L
Sbjct: 220 PLSSLNNLTKLNLMSNQISDIKPIASLNSLNSLDLDKNQI--SDIEALSNLTNLTTLGLD 277
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ + L+NL L+ L LR I+ I+ + T
Sbjct: 278 RNQIINIKPLSNLTKLRWLFLRQNQISDIKPLSSLT 313
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 8 QVLDLSANYNITSGSLTRLGL-----------ANLTNLKKLDLDGCGITTIQGLAKLKNL 56
Q+ D+ A N+T+ LT LGL +NLT L+ L L I+ I+ L+ L NL
Sbjct: 258 QISDIEALSNLTN--LTTLGLDRNQIINIKPLSNLTKLRWLFLRQNQISDIKPLSSLTNL 315
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITT 114
L+L SN ++ L NL L+ L+LS NQ LANL NL ++ + I T
Sbjct: 316 RWLELKSNKI--RDVKPLTNLAKLRNLNLSSNQITNVQSLANLTNLVNFNVEENPINT 371
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
LA+LTNL LDL G I+ + LA L NL LD+ SN + L NL NL L +
Sbjct: 132 PLASLTNLTNLDLGGNKISDVTPLASLTNLIRLDVYSNQI--SDINSLENLNNLTFLRVG 189
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
N+ + AN NL L L + I+ ++ +
Sbjct: 190 SNRIVDVKQFANFTNLTELWLEENQISDVRPL 221
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
++++R L L+ N+ S ++ + +A+L +L LDLD I+ I+ L+ L NL L
Sbjct: 215 ISDVRPLSSLNNLTKLNLMSNQISDIKPIASLNSLNSLDLDKNQISDIEALSNLTNLTTL 274
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L N ++ ++ L+NLT L+ L L NQ L++L NL+ L+L+ I ++ +
Sbjct: 275 GLDRNQIIN--IKPLSNLTKLRWLFLRQNQISDIKPLSSLTNLRWLELKSNKIRDVKPL 331
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L+ LTNL +DL G I+ ++ L L NL L++ N ++ LA+LTNL LDL
Sbjct: 88 PLSGLTNLTNIDLWGNKISDVKPLVNLTNLTNLNIGGNKI--SDVKPLASLTNLTNLDLG 145
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
GN+ LA+L NL LD+ I+ I ++
Sbjct: 146 GNKISDVTPLASLTNLIRLDVYSNQISDINSLE 178
>gi|418731390|ref|ZP_13289789.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
gi|410773922|gb|EKR53943.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
Length = 315
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
Query: 27 GLANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
L N ++++LDL G+TT+ + + KL+NL+ L+L SN L E +A L NLQ L L
Sbjct: 48 ALQNPKDVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSN-RLTTLPEEIAQLRNLQRLQL 106
Query: 86 SGNQNLTTLG--LANLPNLKTLDLRDCGITTI-QGIQQF 121
S NQ TTL + L NL+ LDL D +TT+ + I QF
Sbjct: 107 SFNQ-FTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQF 144
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 66/126 (52%), Gaps = 11/126 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+A LR LQ L + N T + L L+ LDL G +TT+ + + +L+NL+AL
Sbjct: 187 IAQLRSLQRLYVYGNRFTTFPE----EITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKAL 242
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI-- 115
L N L E + L NLQ L LSGNQ LTTL + L NL+TL L+ I +
Sbjct: 243 HLGGNQ-LAILPEEITQLQNLQTLILSGNQ-LTTLPKEIGRLQNLQTLILKGNPIVSKER 300
Query: 116 QGIQQF 121
Q IQQ
Sbjct: 301 QRIQQL 306
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 9/108 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+A LR LQ L LS N T + L NL+ LDL+ +TT+ + +A+ + L+ L
Sbjct: 95 IAQLRNLQRLQLSFNQFTTLPK----EIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWL 150
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTL 105
L +N L + + L NL++L LSGN+ LTTL +A L +L+ L
Sbjct: 151 RLDNNQ-LANLPQEITQLQNLELLFLSGNR-LTTLPEEIAQLRSLQRL 196
>gi|418702265|ref|ZP_13263176.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|418717513|ref|ZP_13277175.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|421116459|ref|ZP_15576844.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|421125803|ref|ZP_15586047.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421136751|ref|ZP_15596848.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410011919|gb|EKO70025.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410018933|gb|EKO85761.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410436455|gb|EKP85567.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410758784|gb|EKR25010.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410787110|gb|EKR80845.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|455790756|gb|EMF42603.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
str. TE 1992]
Length = 315
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
Query: 27 GLANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
L N ++++LDL G+TT+ + + KL+NL+ L+L SN L E +A L NLQ L L
Sbjct: 48 ALQNPKDVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSN-RLTTLPEEIAQLRNLQRLQL 106
Query: 86 SGNQNLTTLG--LANLPNLKTLDLRDCGITTI-QGIQQF 121
S NQ TTL + L NL+ LDL D +TT+ + I QF
Sbjct: 107 SFNQ-FTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQF 144
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 66/126 (52%), Gaps = 11/126 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+A LR LQ L + N T + L L+ LDL G +TT+ + + +L+NL+AL
Sbjct: 187 IAQLRSLQRLYVYGNRFTTFPE----EITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKAL 242
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI-- 115
L N L E + L NLQ L LSGNQ LTTL + L NL+TL L+ I +
Sbjct: 243 HLGGNQ-LAILPEEITQLQNLQTLILSGNQ-LTTLPKEIGRLQNLQTLILKGNPIVSKER 300
Query: 116 QGIQQF 121
Q IQQ
Sbjct: 301 QRIQQL 306
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 9/108 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+A LR LQ L LS N T + L NL+ LDL+ +TT+ + +A+ + L+ L
Sbjct: 95 IAQLRNLQRLQLSFNQFTTLPK----EIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWL 150
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTL 105
L +N L + + L NL++L LSGN+ LTTL +A L +L+ L
Sbjct: 151 RLDNNQ-LANLPQEITQLQNLELLFLSGNR-LTTLPEEIAQLRSLQRL 196
>gi|389642101|ref|XP_003718683.1| leucine-rich repeat-containing protein 40 [Magnaporthe oryzae
70-15]
gi|351641236|gb|EHA49099.1| leucine-rich repeat-containing protein 40 [Magnaporthe oryzae
70-15]
gi|440469168|gb|ELQ38289.1| leucine-rich repeat-containing protein 40 [Magnaporthe oryzae Y34]
gi|440481929|gb|ELQ62463.1| leucine-rich repeat-containing protein 40 [Magnaporthe oryzae P131]
Length = 1231
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 34 LKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLT 92
L+ LDL G + ++ GL +L+ L +L+LSSN +GS E ++ +T+L+ L L GN
Sbjct: 631 LETLDLHGNMLISLPMGLRRLQYLTSLNLSSNRITNGSFEVISQITSLRDLKLGGNLFYG 690
Query: 93 TL--GLANLPNLKTLDLRDCGITTI 115
L NL NL+T+DL D I+ +
Sbjct: 691 PLDNSFTNLVNLETVDLHDNNISAL 715
>gi|261188236|ref|XP_002620534.1| protein phosphatase regulatory subunit Sds22 [Ajellomyces
dermatitidis SLH14081]
gi|239593281|gb|EEQ75862.1| protein phosphatase regulatory subunit Sds22 [Ajellomyces
dermatitidis SLH14081]
Length = 351
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
LTNLK + L +TTI GL+KL+NLE L +S N ++ GL N TNL+VLD+S NQ
Sbjct: 216 LTNLKIISLPSNRLTTISGLSKLQNLEELYVSHNAI--TAISGLENNTNLRVLDISSNQ 272
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L +LT L++L L IT I+ + L NL+ + L SN ++ GL+ L NL+ L +S
Sbjct: 191 LDDLTALEELWLGKNKITEIKNIDALTNLKIISLPSNRL--TTISGLSKLQNLEELYVSH 248
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N GL N NL+ LD+ I+ ++ I T
Sbjct: 249 NAITAISGLENNTNLRVLDISSNQISKLENISHLT 283
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 18 ITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
+ S LT + GL+ L NL++L + IT I GL NL LD+SSN LE +++
Sbjct: 224 LPSNRLTTISGLSKLQNLEELYVSHNAITAISGLENNTNLRVLDISSNQI--SKLENISH 281
Query: 77 LTNLQVLDLSGNQ 89
LT+L+ L S NQ
Sbjct: 282 LTHLEELWASNNQ 294
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L L+ L+L I I+ L L LE L L N ++ + LTNL+++ L
Sbjct: 168 GLDGLKVLRNLELAANRIREIENLDDLTALEELWLGKNKI--TEIKNIDALTNLKIISLP 225
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ T GL+ L NL+ L + IT I G++ T
Sbjct: 226 SNRLTTISGLSKLQNLEELYVSHNAITAISGLENNT 261
>gi|418693182|ref|ZP_13254245.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
gi|418723760|ref|ZP_13282594.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|400356840|gb|EJP12998.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
gi|409962558|gb|EKO26292.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
Length = 315
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
Query: 27 GLANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
L N ++++LDL G+TT+ + + KL+NL+ L+L SN L E +A L NLQ L L
Sbjct: 48 ALQNPKDVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSN-RLTTLPEEIAQLRNLQRLQL 106
Query: 86 SGNQNLTTLG--LANLPNLKTLDLRDCGITTI-QGIQQF 121
S NQ TTL + L NL+ LDL D +TT+ + I QF
Sbjct: 107 SFNQ-FTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQF 144
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 66/126 (52%), Gaps = 11/126 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+A LR LQ L + N T + L L+ LDL G +TT+ + + +L+NL+AL
Sbjct: 187 IAQLRSLQRLYVYGNRFTTFPE----EITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKAL 242
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI-- 115
L N L E + L NLQ L LSGNQ LTTL + L NL+TL L+ I +
Sbjct: 243 HLGGNQ-LAILPEEITQLQNLQTLILSGNQ-LTTLPKEIGRLQNLQTLILKGNPIVSKER 300
Query: 116 QGIQQF 121
Q IQQ
Sbjct: 301 QRIQQL 306
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 9/108 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+A LR LQ L LS N T + L NL+ LDL+ +TT+ + +A+ + L+ L
Sbjct: 95 IAQLRNLQRLQLSFNQFTTLPK----EIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWL 150
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTL 105
L +N L + + L NL++L LSGN+ LTTL +A L +L+ L
Sbjct: 151 SLDNNQ-LANLPQEITQLQNLELLFLSGNR-LTTLPEEIAQLRSLQRL 196
>gi|365163588|ref|ZP_09359694.1| hypothetical protein HMPREF1014_05157, partial [Bacillus sp.
7_6_55CFAA_CT2]
gi|363615357|gb|EHL66823.1| hypothetical protein HMPREF1014_05157, partial [Bacillus sp.
7_6_55CFAA_CT2]
Length = 869
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L N++++ L + +IT G L +G LA L +++ L L I+ + L+++K ++ L
Sbjct: 257 LKNIKFISGLRQLKSLSITYGELEDIGPLAELEHIEFLTLRNNKISDLSPLSQMKKIKML 316
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQG 117
DL+SNY ++ L + +L+ L ++ NQ N G+ L N+K L L + G+T I+
Sbjct: 317 DLNSNYI--KDIKPLFTVKSLKTLTVANNQISNDNLAGIEQLKNVKNLSLSNNGLTNIEH 374
Query: 118 I 118
I
Sbjct: 375 I 375
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 21/140 (15%)
Query: 1 LANLRYLQVLDLSANYN------ITSGSLTRLGLAN-------------LTNLKKLDLDG 41
L+ ++ +++LDL++NY T SL L +AN L N+K L L
Sbjct: 307 LSQMKKIKMLDLNSNYIKDIKPLFTVKSLKTLTVANNQISNDNLAGIEQLKNVKNLSLSN 366
Query: 42 CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
G+T I+ + +K L LDL+ N ++E L+ L+ +Q L+L N L++L +
Sbjct: 367 NGLTNIEHITSMKKLVELDLAKNEL--ENIEPLSRLSTVQSLNLEENYISDITPLSHLTD 424
Query: 102 LKTLDLRDCGITTIQGIQQF 121
L L L I ++ +Q+
Sbjct: 425 LYDLKLGSNEIRDVRPVQEL 444
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 67/126 (53%), Gaps = 11/126 (8%)
Query: 1 LANLRYLQVLDLSAN--YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L ++ L++L + N NIT GL +TNL+KL L+G G+ I+ ++ LK L
Sbjct: 580 LLQIKKLEILKENGNEIKNIT-------GLEYMTNLEKLTLEGVGLKNIEFISNLKQLNN 632
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
+++S N + L++L NLQ L+L+ N+ L ++ +L +L L + I ++ +
Sbjct: 633 VNVSHNQI--EDITPLSSLENLQWLNLTDNRIKDVTVLGSMLDLLSLKLAENEIRDVRPL 690
Query: 119 QQFTSY 124
Q +
Sbjct: 691 IQLGQW 696
>gi|334332880|ref|XP_003341658.1| PREDICTED: hypothetical protein LOC100619206 [Monodelphis
domestica]
Length = 401
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA-NLTNLQVLDLSG 87
A NL+ L L G++T+ L +L L+ L+LS N + G L+ LA L NL L+LSG
Sbjct: 60 AEFVNLEFLSLISVGLSTVSNLPELPKLKKLELSDNR-IFGGLDVLAEKLPNLTHLNLSG 118
Query: 88 N--QNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQ 120
N ++++TL L L LK+LDL +C +T + ++
Sbjct: 119 NNLKDISTLEPLKKLEYLKSLDLFNCEVTNLNDYRE 154
>gi|423531450|ref|ZP_17507895.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB1-1]
gi|402444333|gb|EJV76220.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB1-1]
Length = 1016
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L N++++ L + +IT G L +G LA L +++ L L I+ + L+++K ++ L
Sbjct: 257 LKNIKFISELRQLKSLSITYGELEDIGPLAELEHIEFLTLRNNKISDLSPLSQMKKIKML 316
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQG 117
DL+SNY ++ L + +L+ L ++ NQ N G+ L N+K L L + G+T I+
Sbjct: 317 DLNSNYI--KDIKPLFTVKSLRTLTVANNQISNDNLAGIEQLKNVKNLSLSNNGLTNIEH 374
Query: 118 I 118
I
Sbjct: 375 I 375
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 21/140 (15%)
Query: 1 LANLRYLQVLDLSANYN------ITSGSLTRLGLAN-------------LTNLKKLDLDG 41
L+ ++ +++LDL++NY T SL L +AN L N+K L L
Sbjct: 307 LSQMKKIKMLDLNSNYIKDIKPLFTVKSLRTLTVANNQISNDNLAGIEQLKNVKNLSLSN 366
Query: 42 CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
G+T I+ + +K L LDL+ N ++E L+ L+ +Q L+L N L++L +
Sbjct: 367 NGLTNIEHITSMKKLVELDLAKNEL--ENIEPLSRLSTVQSLNLEENYISDITPLSHLTD 424
Query: 102 LKTLDLRDCGITTIQGIQQF 121
L L L I ++ +Q+
Sbjct: 425 LYDLKLGSNEIRDVRPVQEL 444
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 11/126 (8%)
Query: 1 LANLRYLQVLDLSAN--YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L ++ L++L + N NIT GL +TNL+KL L+G G+ I+ ++ LK L
Sbjct: 580 LLQIKKLEILKENGNEIKNIT-------GLEYMTNLEKLTLEGVGLKNIEFISNLKQLNN 632
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
+++S N + L++L NLQ L+L+ N + ++ NL +L+L I ++ +
Sbjct: 633 VNVSHNQI--EDITPLSSLENLQWLNLADNHIKDVTVIGSMLNLFSLNLAGNEIRDVRPL 690
Query: 119 QQFTSY 124
Q +
Sbjct: 691 IQLGQW 696
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 20 SGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTN 79
+ S+T+ L + L+ L +G I I GL + NLE L L ++E ++NL
Sbjct: 572 NASITKKDLLQIKKLEILKENGNEIKNITGLEYMTNLEKLTLEGVGL--KNIEFISNLKQ 629
Query: 80 LQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L +++S NQ L++L NL+ L+L D I + I
Sbjct: 630 LNNVNVSHNQIEDITPLSSLENLQWLNLADNHIKDVTVI 668
>gi|359488025|ref|XP_003633688.1| PREDICTED: uncharacterized protein LOC100852821 [Vitis vinifera]
Length = 1781
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/105 (40%), Positives = 58/105 (55%), Gaps = 11/105 (10%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSS 63
++ L+VLDLS + SL L L LTNL+ L LDGC + I +AKLK LE L L
Sbjct: 550 MKQLKVLDLS---RMQLPSLP-LSLHCLTNLRTLCLDGCKVGDIVIIAKLKKLEILSLKD 605
Query: 64 NYYLHGSLEGLANLTNLQVLDLSGNQNLTTL------GLANLPNL 102
+ E +A LT+L++LDLSG+ L + L+ L NL
Sbjct: 606 SDMEQLPRE-IAQLTHLRLLDLSGSSKLKVIPSDVISSLSQLENL 649
>gi|46446666|ref|YP_008031.1| hypothetical protein pc1032 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400307|emb|CAF23756.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 734
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L L LQ L+LS + +T L L LT L+ LDL C T GLA L L AL
Sbjct: 370 LKPLTALQHLNLSECWKLTDAGLAHL--TPLTALQHLDLSRCNSLTDAGLAHLTPLTALQ 427
Query: 60 --DLS-SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
DLS + L L +LT LQ L+LS +NLT GLA+L L+ L+L +C
Sbjct: 428 HLDLSDCQNFTDAGLAHLTSLTGLQYLNLSEYKNLTDAGLAHLTPLTALQHLNLCNCRKF 487
Query: 114 TIQGIQQFTS 123
T G+ T
Sbjct: 488 TDNGLAHLTP 497
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL---DLSSNYYL-HGSLEGLANLTNLQVL 83
L LT L+ L+L+ C T GL+ LK L AL +LS + L L L LT LQ L
Sbjct: 345 LTPLTGLQHLNLNRCKDLTDAGLSHLKPLTALQHLNLSECWKLTDAGLAHLTPLTALQHL 404
Query: 84 DLSGNQNLTTLGLANLPNL---KTLDLRDCGITTIQGIQQFTS 123
DLS +LT GLA+L L + LDL DC T G+ TS
Sbjct: 405 DLSRCNSLTDAGLAHLTPLTALQHLDLSDCQNFTDAGLAHLTS 447
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L L LQ LDLS N+T L L A LT L++L L C T GLA L L AL
Sbjct: 495 LTPLTALQHLDLSHCKNLTDDGLAHL--APLTGLQRLVLSWCDKLTDAGLAHLTPLTALQ 552
Query: 60 --DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
DLS L L LT LQ L L LT GLA+L L TL
Sbjct: 553 YLDLSCCEITDAGLAHLTPLTGLQHLVLVYCWQLTDAGLAHLTPLTTL 600
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 60/133 (45%), Gaps = 18/133 (13%)
Query: 5 RYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLA---KLKNLEALDL 61
+ ++ L+ S N +T L L L N NLK L C T GLA L L+ LDL
Sbjct: 224 KKIETLNFSENARLTDAHL--LTLKNCKNLKILHFKKCWGVTDAGLAHLTPLTTLQYLDL 281
Query: 62 SSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLD---------LRDCG 111
S L L L LT LQ LDLS +LT GLA+L L L L+D G
Sbjct: 282 SDCEKLTDDGLAHLTPLTGLQHLDLSWCSSLTDAGLAHLTPLTALQHLNLNRCEYLKDAG 341
Query: 112 ---ITTIQGIQQF 121
+T + G+Q
Sbjct: 342 LAHLTPLTGLQHL 354
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L LQ LDLS N T L L +LT L+ L+L T GLA L L AL
Sbjct: 420 LTPLTALQHLDLSDCQNFTDAGLAHL--TSLTGLQYLNLSEYKNLTDAGLAHLTPLTALQ 477
Query: 61 ----LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
+ + L L LT LQ LDLS +NLT GLA+L L+ L L C
Sbjct: 478 HLNLCNCRKFTDNGLAHLTPLTALQHLDLSHCKNLTDDGLAHLAPLTGLQRLVLSWCDKL 537
Query: 114 TIQGIQQFTS 123
T G+ T
Sbjct: 538 TDAGLAHLTP 547
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LA L LQ L L+ +T L L LT L+ L L+ C T GLA LK L AL
Sbjct: 619 LAPLTALQHLALNDCRKLTDTGLAHL--TPLTALQHLTLNRCEKLTDDGLAHLKPLAALQ 676
Query: 61 LSSNYYLHGSLEGLANLTN---LQVLDLSGNQ 89
Y + GLA+LT+ LQ LDL G +
Sbjct: 677 YLDLSYCEITDAGLAHLTHLMALQRLDLYGRE 708
>gi|302825766|ref|XP_002994468.1| hypothetical protein SELMODRAFT_432388 [Selaginella moellendorffii]
gi|300137577|gb|EFJ04466.1| hypothetical protein SELMODRAFT_432388 [Selaginella moellendorffii]
Length = 281
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Query: 17 NITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNLEALDLSSNYYLHGSLEG- 73
+ ++GS+ LA+L NL L+L G T L+KLKNL+ LDLS L GS+
Sbjct: 178 DASAGSIPSF-LASLENLTILNLQGSWFTGSIPSSLSKLKNLQTLDLSDGLRLTGSIPAF 236
Query: 74 LANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDL 107
L L NL+ LDLSG + ++ L NLP L+ LD+
Sbjct: 237 LGGLQNLEYLDLSGTKFSGSIPPSLGNLPKLRFLDI 272
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDL---DGCGITTIQGLAKLKNLEALDLSS 63
LQ LDLS Y + +G LT+L+KL L D + LA L+NL L+L
Sbjct: 145 LQTLDLSG-YRFEGPFPSVIG--KLTSLRKLILERADASAGSIPSFLASLENLTILNLQG 201
Query: 64 NYYLHGSLEGLANLTNLQVLDLSGNQNLT---TLGLANLPNLKTLDL 107
+++ L+ L NLQ LDLS LT L L NL+ LDL
Sbjct: 202 SWFTGSIPSSLSKLKNLQTLDLSDGLRLTGSIPAFLGGLQNLEYLDL 248
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDL-DGCGIT-TIQG-LAKLKNLE 57
LA+L L +L+L ++ +GS+ L+ L NL+ LDL DG +T +I L L+NLE
Sbjct: 188 LASLENLTILNLQGSW--FTGSIPS-SLSKLKNLQTLDLSDGLRLTGSIPAFLGGLQNLE 244
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
LDLS + L NL L+ LD+S
Sbjct: 245 YLDLSGTKFSGSIPPSLGNLPKLRFLDIS 273
>gi|115388307|ref|XP_001211659.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195743|gb|EAU37443.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1791
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L NL+YL N++ L L G + L +L++L+ I + G+ L L +L
Sbjct: 1337 LVNLQYL---------NVSGNELESLDGFSGLIHLRELNARNNKIRDVDGVFGLDGLLSL 1387
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L +N EG A LT LQ LDLS NQ ++ + +L L TLDL ++T+
Sbjct: 1388 KLGNNNLTAVDFEG-AELTRLQELDLSHNQLMSIRSIESLSALTTLDLSSNHLSTV 1442
Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 12/110 (10%)
Query: 2 ANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDL 61
A L LQ LDLS N ++ S+ +L+ L LDL ++T+ + L NL +L L
Sbjct: 1402 AELTRLQELDLSHNQLMSIRSIE-----SLSALTTLDLSSNHLSTVDLASPLSNLRSLKL 1456
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSGNQNL--TTLGLANLPNLKTLDLRD 109
S+N + + + +LT L V +QN T GL NL+ L R+
Sbjct: 1457 SNNQFYNLDVGVFPSLTLLYV-----DQNYLSTVSGLNQCRNLEILSARE 1501
>gi|302840034|ref|XP_002951573.1| hypothetical protein VOLCADRAFT_92020 [Volvox carteri f.
nagariensis]
gi|300263182|gb|EFJ47384.1| hypothetical protein VOLCADRAFT_92020 [Volvox carteri f.
nagariensis]
Length = 267
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYL 67
QVL+L+ + S +T GL NLK L L G G+TT++G +L L L+LS N
Sbjct: 21 QVLNLTLDSVCKSTHIT--GLDAFVNLKSLSLCGLGLTTLEGFPRLSKLVRLNLSDN--- 75
Query: 68 HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
+ G A LTNL+ L+L+ N+ T LA L LK L D + Q ++S
Sbjct: 76 --RITG-AGLTNLRTLELANNRIATVEELAPLKELKALQCLDVDQCPLSKKQDYSS 128
>gi|296087869|emb|CBI35152.3| unnamed protein product [Vitis vinifera]
Length = 1711
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/105 (40%), Positives = 58/105 (55%), Gaps = 11/105 (10%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSS 63
++ L+VLDLS + SL L L LTNL+ L LDGC + I +AKLK LE L L
Sbjct: 480 MKQLKVLDLS---RMQLPSLP-LSLHCLTNLRTLCLDGCKVGDIVIIAKLKKLEILSLKD 535
Query: 64 NYYLHGSLEGLANLTNLQVLDLSGNQNLTTL------GLANLPNL 102
+ E +A LT+L++LDLSG+ L + L+ L NL
Sbjct: 536 SDMEQLPRE-IAQLTHLRLLDLSGSSKLKVIPSDVISSLSQLENL 579
>gi|343423900|emb|CCD18013.1| leucine-rich repeat protein [Trypanosoma vivax Y486]
Length = 648
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L++L+LS IT S L+ ++L LDL C GIT + L++L +L L
Sbjct: 315 LSELSSLRMLNLSHCTGITDVS----PLSEFSSLHTLDLSHCTGITDVSPLSELSSLRTL 370
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L++L LDLS +T + L+ L +L TL+L C GIT +
Sbjct: 371 DLSHCTGI-TDVSPLSELSSLCTLDLSHCTGITDVSPLSKLSSLCTLELSHCTGITDVSP 429
Query: 118 IQQFTS 123
+ + +S
Sbjct: 430 LSELSS 435
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L LDLS IT S L+ L++L L+L C GIT + L++L +L L
Sbjct: 384 LSELSSLCTLDLSHCTGITDVS----PLSKLSSLCTLELSHCTGITDVSPLSELSSLRTL 439
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L+ L++L LS ++T + L+ L +L+ L+L C GIT +
Sbjct: 440 DLSHCTGI-TDVSPLSELSGLRMLYLSHCPSITDVSPLSELSSLRMLNLSHCTGITDVSP 498
Query: 118 IQQFTS 123
+ +F+S
Sbjct: 499 LSEFSS 504
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 28 LANLTNLKKLDLDGC-GITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L+ L++L+ L L C GIT + L+KL +L LDLS + + L+ ++L+ LDLS
Sbjct: 16 LSKLSSLRMLYLSHCTGITDVSPLSKLSSLRTLDLSHCTGI-TDVSPLSVFSSLEKLDLS 74
Query: 87 GNQNLTTLG-LANLPNLKTLDLRDC-GITTIQGIQQFTS 123
+T + L+ L +L+TLDL C GIT + + +F+S
Sbjct: 75 HCTGITDVSPLSKLSSLRTLDLSHCTGITNVSPLLKFSS 113
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ LDLS IT+ S L ++L+ LD+ C GIT + L++L +L L
Sbjct: 85 LSKLSSLRTLDLSHCTGITNVS----PLLKFSSLRMLDISHCTGITNVSPLSELSSLRTL 140
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L ++L LDLS +T + L +L+ LD+ C GIT +
Sbjct: 141 DLSHCTGI-TDVSPLLKFSSLHTLDLSHCTGITDVSPLLMFSSLRMLDISHCTGITNVSP 199
Query: 118 IQQFTS 123
+ + +S
Sbjct: 200 LSKLSS 205
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L +L LS IT S L + +KL L C GIT + L++L +L L
Sbjct: 522 LSKLSSLHILGLSHCTGITDVS----PLTTIIGFEKLYLSNCTGITDVSPLSELSSLRTL 577
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L++L+ L S +T + L+ L +L+TLDL C GIT +
Sbjct: 578 DLSHCTGI-TDVSPLSKLSSLRTLYFSHCTGITDVSPLSELSSLRTLDLLHCTGITDVSP 636
Query: 118 IQQFTS 123
+ + +S
Sbjct: 637 LSELSS 642
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 67/118 (56%), Gaps = 8/118 (6%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEALDLSSNY 65
L++LD+S IT+ S L+ L++L+ L C GIT + L++L +L LD+S
Sbjct: 183 LRMLDISHCTGITNVS----PLSKLSSLRTLYFLYCTGITNVSPLSELSSLRTLDISHCT 238
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQGIQQF 121
+ + L+ L++L++LDLS +++ + L+ + L+ LDL C G+T + + +
Sbjct: 239 GI-TDVSPLSELSSLRMLDLSHCTDISNVSRLSKIIALQKLDLSHCTGVTDVSPLSKM 295
>gi|422414802|ref|ZP_16491759.1| internalin A, partial [Listeria innocua FSL J1-023]
gi|313625220|gb|EFR95067.1| internalin A [Listeria innocua FSL J1-023]
Length = 435
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 17 NITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
N+++ LT L L L+NL L +G I +QG++ LKNL LDLS+N + + LA
Sbjct: 187 NVSNNKLTNLDDLQALSNLGVLYANGNQIGNLQGISALKNLFLLDLSANQIVDTT--PLA 244
Query: 76 NLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
LTN+Q L +S NQ GL++L NL LD+ I+ I+ + T
Sbjct: 245 GLTNIQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLT 291
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 25/138 (18%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL+ LQ LD++ N IT + L+ LTNLK L L + + G+ L+ L +L+
Sbjct: 133 LSNLKNLQALDIN-NAQITDIT----PLSGLTNLKGLGLYNNQLENLSGVNNLQQLRSLN 187
Query: 61 LSSNYYLH--------------------GSLEGLANLTNLQVLDLSGNQNLTTLGLANLP 100
+S+N + G+L+G++ L NL +LDLS NQ + T LA L
Sbjct: 188 VSNNKLTNLDDLQALSNLGVLYANGNQIGNLQGISALKNLFLLDLSANQIVDTTPLAGLT 247
Query: 101 NLKTLDLRDCGITTIQGI 118
N++TL + + I+ + G+
Sbjct: 248 NIQTLYVSNNQISDVTGL 265
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 30 NLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
+L + L L GI++I+G+ L NL L LS N + L LTNL +L LS N
Sbjct: 69 DLDTINSLTLTSKGISSIEGMNYLNNLGTLILSGNQV--SDISPLKGLTNLTMLQLSENP 126
Query: 90 NLTTLGLANLPNLKTLDLRDCGITTI 115
L+NL NL+ LD+ + IT I
Sbjct: 127 ISDISALSNLKNLQALDINNAQITDI 152
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LTNL L L I+ I L+ LKNL+ALD+ N + L+ LTNL+ L L
Sbjct: 111 LKGLTNLTMLQLSENPISDISALSNLKNLQALDI--NNAQITDITPLSGLTNLKGLGLYN 168
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
NQ G+ NL L++L++ + +T + +Q
Sbjct: 169 NQLENLSGVNNLQQLRSLNVSNNKLTNLDDLQ 200
>gi|302808275|ref|XP_002985832.1| hypothetical protein SELMODRAFT_424866 [Selaginella moellendorffii]
gi|300146339|gb|EFJ13009.1| hypothetical protein SELMODRAFT_424866 [Selaginella moellendorffii]
Length = 1843
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
++ + G+ LK ++ LDLS N + G E LAN LQ L L+GNQ + GL LPNL+
Sbjct: 460 LSNMDGIEILKRVKVLDLSFNEFKGGGFEPLANCKALQQLYLAGNQITSLSGLPQLPNLE 519
Query: 104 TLDL 107
L +
Sbjct: 520 FLSV 523
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 57/108 (52%), Gaps = 10/108 (9%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSS 63
L+ ++VLDLS N G L AN L++L L G IT++ GL +L NLE L ++
Sbjct: 469 LKRVKVLDLSFN-EFKGGGFEPL--ANCKALQQLYLAGNQITSLSGLPQLPNLEFLSVAQ 525
Query: 64 NYYLHGSLEGLANLTN--LQVLDLSGNQNLTTLGLANLPNLKTLDLRD 109
N L+ LA T LQVL S N+ T G +LP L+ L L +
Sbjct: 526 N-----RLKSLAMATQPRLQVLAASKNKISTLKGFPHLPALEHLRLEE 568
>gi|426340837|ref|XP_004034333.1| PREDICTED: nischarin isoform 1 [Gorilla gorilla gorilla]
gi|426340839|ref|XP_004034334.1| PREDICTED: nischarin isoform 2 [Gorilla gorilla gorilla]
Length = 1504
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY 66
L LDLS N S S + + ++ LDL G+ + L L NL LDLS N
Sbjct: 289 LTTLDLSHN----SFSEIDESVKLIPKIEFLDLSHNGLLVVDNLQHLYNLVHLDLSYNKL 344
Query: 67 LHGSLEGL-ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
SLEGL L N++ L+L+GN + GL L +L LDLRD I ++ ++ S
Sbjct: 345 --SSLEGLHTKLGNIKTLNLAGNLLESLSGLHKLYSLVNLDLRDNRIEQMEEVRSIGS 400
>gi|423393066|ref|ZP_17370292.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG1X1-3]
gi|401632746|gb|EJS50531.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG1X1-3]
Length = 938
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L N++++ L + NIT L + LA L N++ L L I+ + L+++K ++ L
Sbjct: 257 LDNMQFISKLRQLKSVNITYSELQNIEPLAELENIENLSLRNNKISDVSPLSQMKKIKIL 316
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQG 117
DL+SN + L +T+L+ L L+ NQ N G+ L N+K L L + G+T I+
Sbjct: 317 DLNSNDI--KDITPLFTVTSLRTLTLANNQISNANLAGIEQLKNVKNLSLSNNGLTNIEH 374
Query: 118 I 118
I
Sbjct: 375 I 375
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 14 ANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEG 73
AN I++ +L G+ L N+K L L G+T I+ + +K L LDLS N ++E
Sbjct: 341 ANNQISNANLA--GIEQLKNVKNLSLSNNGLTNIEHITSMKKLVELDLSKNEL--KNIEP 396
Query: 74 LANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
L L+ +Q L+L N L+ L L L L I ++ +Q+
Sbjct: 397 LLRLSTVQSLNLEENYISDITPLSQLTGLYDLKLGSNEIRDVRPVQEL 444
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+ L L+ + +Q ++KL+ L++++++ Y ++E LA L N++ L L
Sbjct: 240 GLEYMTNLENLTLEEVKLDNMQFISKLRQLKSVNIT--YSELQNIEPLAELENIENLSLR 297
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ L+ + +K LDL I I + TS
Sbjct: 298 NNKISDVSPLSQMKKIKILDLNSNDIKDITPLFTVTS 334
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+ L L+G G+ I+ ++ LK L+ +++S N + L++L NLQ L+L+
Sbjct: 590 GLEYMTNLENLTLEGVGLKNIEFISNLKQLKEVNVSHNKI--EDITPLSSLENLQWLNLA 647
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
N L ++ +L +L L I ++ + Q +
Sbjct: 648 DNHIKDVSVLGSMLDLLSLKLAGNEIRDVRPLIQLGQW 685
>gi|290997822|ref|XP_002681480.1| predicted protein [Naegleria gruberi]
gi|284095104|gb|EFC48736.1| predicted protein [Naegleria gruberi]
Length = 271
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 12 LSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSL 71
+ +YN+ S T G +L ++ KLDL+ GI+ I+ L + LE LDLS N ++
Sbjct: 42 IEIDYNLIS---TVSGQFDLGSVAKLDLNSIGISKIKNLGRCIRLEYLDLSHNDI--ETM 96
Query: 72 EGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
EGL N+T L+ L+LS N+ +++L +L+ L+L I + IQ+
Sbjct: 97 EGLENITKLKRLNLSNNKIKKLECISSLKHLQHLNLEKNNIENLTDIQE 145
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 26/114 (22%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY 66
L+ LDLS N T GL N+T LK+L+L I ++ ++ LK+L+ L+L N
Sbjct: 83 LEYLDLSHN-----DIETMEGLENITKLKRLNLSNNKIKKLECISSLKHLQHLNLEKN-- 135
Query: 67 LHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ NLT++Q L +PNLK+++L+ + +G +
Sbjct: 136 ------NIENLTDIQELQY-------------VPNLKSINLKGNPVCEKEGFDE 170
>gi|332271213|gb|AEE38253.1| membrane toll-like receptor 5 [Salmo salar]
Length = 879
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 23 LTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSNYYLHGSLEGLANLTNL 80
+ R L NL+KL+L I I KL N+ LDLS N+ L NL
Sbjct: 330 IDREAFFGLQNLQKLNLSHNLIGEIYSYTFDKLPNILELDLSYNHIGALGYHAFKGLPNL 389
Query: 81 QVLDLSGN--QNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
Q LDL+GN + L T G LA LPN++ L L D IT+++G+ F
Sbjct: 390 QFLDLTGNSIRELGTYGSLAPLPNIQHLRLADNKITSLEGLAGFA 434
>gi|418712123|ref|ZP_13272868.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|410791390|gb|EKR85066.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
Length = 475
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 68/120 (56%), Gaps = 13/120 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTIQ-GLAKLKNLE 57
+ LR LQ LDLS N SLT L + L NL++LDL + T+ + +LKNL+
Sbjct: 113 IGQLRNLQELDLSFN------SLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQ 166
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
LDL+SN L + + L NLQ LDL NQ LTTL + L NLKTL+L +TT+
Sbjct: 167 ELDLNSN-KLTTLPKEIRQLRNLQELDLHRNQ-LTTLPKEIGQLQNLKTLNLIVTQLTTL 224
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ LQ LDL N T + L NL++LDL +TT+ + + +L+NL+ L
Sbjct: 274 IGQLQNLQWLDLHQNQLTTLPK----EIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQEL 329
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG 95
L N L + + L NL+VLDL NQ LTTL
Sbjct: 330 CLDENQ-LTTLPKEIEQLQNLRVLDLDNNQ-LTTLP 363
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 28 LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+ L NL+ LDLD +TT+ + + +L++L+ L L SN L + + L NLQVL L
Sbjct: 343 IEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNR-LSTLPKEIGQLQNLQVLGLI 401
Query: 87 GNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
NQ LTTL + L NL+ L L + +TT
Sbjct: 402 SNQ-LTTLPKEIGQLQNLQELCLDENQLTTF 431
>gi|421118971|ref|ZP_15579298.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|410348311|gb|EKO99137.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
Length = 498
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 68/120 (56%), Gaps = 13/120 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTIQ-GLAKLKNLE 57
+ LR LQ LDLS N SLT L + L NL++LDL + T+ + +LKNL+
Sbjct: 136 IGQLRNLQELDLSFN------SLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQ 189
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
LDL+SN L + + L NLQ LDL NQ LTTL + L NLKTL+L +TT+
Sbjct: 190 ELDLNSN-KLTTLPKEIRQLRNLQELDLHRNQ-LTTLPKEIGQLQNLKTLNLIVTQLTTL 247
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 28 LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+ L NL++LDL +T + + + +L+NL+ LDLS N L + + L NLQ L+L+
Sbjct: 67 IGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFN-SLTTLPKEVGQLENLQRLNLN 125
Query: 87 GNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
Q LTTL + L NL+ LDL +TT+
Sbjct: 126 S-QKLTTLPKEIGQLRNLQELDLSFNSLTTL 155
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTI-QGLAKLKNLE 57
+ L+ LQ LDL N LT L + L NL++LDL +TT+ + + +L+NL+
Sbjct: 297 IGQLQNLQWLDLHQN------QLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQ 350
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG 95
L L N L + + L NL+VLDL NQ LTTL
Sbjct: 351 ELCLDENQ-LTTLPKEIEQLQNLRVLDLDNNQ-LTTLP 386
>gi|418701699|ref|ZP_13262621.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410759263|gb|EKR25478.1| leucine rich repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 498
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 68/120 (56%), Gaps = 13/120 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTIQ-GLAKLKNLE 57
+ LR LQ LDLS N SLT L + L NL++LDL + T+ + +LKNL+
Sbjct: 136 IGQLRNLQELDLSFN------SLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQ 189
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
LDL+SN L + + L NLQ LDL NQ LTTL + L NLKTL+L +TT+
Sbjct: 190 ELDLNSN-KLTTLPKEIRQLRNLQELDLHRNQ-LTTLPKEIGQLQNLKTLNLIVTQLTTL 247
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 28 LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+ L NL++LDL +T + + + +L+NL+ LDLS N L + + L NLQ L+L+
Sbjct: 67 IGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFN-SLTTLPKEVGQLENLQRLNLN 125
Query: 87 GNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
Q LTTL + L NL+ LDL +TT+
Sbjct: 126 S-QKLTTLPKEIGQLRNLQELDLSFNSLTTL 155
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ LQ LDL N T + L NL++LDL +TT+ + + +L+NL+ L
Sbjct: 297 IGQLQNLQWLDLHQNQLTTLPK----EIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQEL 352
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG 95
L N L + + L NL+VLDL NQ LTTL
Sbjct: 353 CLDENQ-LTTLPKEIEQLQNLRVLDLDNNQ-LTTLP 386
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 28 LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+ L NL+ LDLD +TT+ + + +L++L+ L L SN L + + L NLQVL L
Sbjct: 366 IEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNR-LSTLPKEIGQLQNLQVLGLI 424
Query: 87 GNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
NQ LTTL + L NL+ L L + +TT
Sbjct: 425 SNQ-LTTLPKEIGQLQNLQELCLDENQLTTF 454
>gi|417763987|ref|ZP_12411960.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400353819|gb|EJP05972.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
Length = 452
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 68/120 (56%), Gaps = 13/120 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTIQ-GLAKLKNLE 57
+ LR LQ LDLS N SLT L + L NL++LDL + T+ + +LKNL+
Sbjct: 90 IGQLRNLQELDLSFN------SLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQ 143
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
LDL+SN L + + L NLQ LDL NQ LTTL + L NLKTL+L +TT+
Sbjct: 144 ELDLNSN-KLTTLPKEIRQLRNLQELDLHRNQ-LTTLPKEIGQLQNLKTLNLIVTQLTTL 201
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTI-QGLAKLKNLE 57
+ L+ LQ LDL N LT L + L NL++LDL +TT+ + + +L+NL+
Sbjct: 251 IGQLQNLQWLDLHQN------QLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQ 304
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG 95
L L N L + + L NL+VLDL NQ LTTL
Sbjct: 305 ELCLDENQ-LTTLPKEIEQLQNLRVLDLDNNQ-LTTLP 340
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 20 SGSLTRLG--LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
SG+ T L L N ++ LDL +T + + + +L+NL+ LDLS N E +
Sbjct: 34 SGTYTDLAKTLQNPLKVRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKE-IGQ 92
Query: 77 LTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
L NLQ LDLS N +LTTL + L NL+ LDL + T+
Sbjct: 93 LRNLQELDLSFN-SLTTLPKEVGQLENLQRLDLHQNRLATL 132
>gi|347547842|ref|YP_004854170.1| putative internalin B [Listeria ivanovii subsp. ivanovii PAM 55]
gi|346980913|emb|CBW84832.1| Putative internalin B, with GW modules [Listeria ivanovii subsp.
ivanovii PAM 55]
Length = 794
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L+ LD+D ++ I LA L LE L L N + L NL NL L+L
Sbjct: 160 LANLTKLEILDMDNNQVSDISALANLGQLETLRLERNRV--SDIGALTNLINLVTLNLFQ 217
Query: 88 NQNLTTLGLANLPNLKTLDLRD 109
NQ LA L LK L++ D
Sbjct: 218 NQVSDITPLAGLKKLKRLEIND 239
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+ +++ L+ L N +T + L ++ LT L + L+ + + L KL NLE L
Sbjct: 88 IQSIKGLEYLTKLINLFLTDNQIADLSPISELTTLNWITLERNRVHDLTALTKLTNLECL 147
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+++N ++ LANLT L++LD+ NQ LANL L+TL L ++ I
Sbjct: 148 TINNNRIT--DVKPLANLTKLEILDMDNNQVSDISALANLGQLETLRLERNRVSDI 201
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL LT L L L I + +++L L + L N +H L L LTNL+ L ++
Sbjct: 93 GLEYLTKLINLFLTDNQIADLSPISELTTLNWITLERNR-VH-DLTALTKLTNLECLTIN 150
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
N+ LANL L+ LD+ + ++ I +
Sbjct: 151 NNRITDVKPLANLTKLEILDMDNNQVSDISAL 182
>gi|341887092|gb|EGT43027.1| hypothetical protein CAEBREN_25749 [Caenorhabditis brenneri]
Length = 326
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L LT L+ L+L I I+ ++ L NL+ L L N +EG+ +L NLQVL +
Sbjct: 142 NLEGLTQLRLLELGDNRIKNIENISHLSNLKELFLGKNKI--RKIEGVESLKNLQVLSIP 199
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
GN+ + + L NLK L L D G+ I G++
Sbjct: 200 GNRLVKIENVEELTNLKELYLSDQGLQDIHGVE 232
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+++L+NLK+L L I I+G+ LKNL+ L + N + +E + LTNL+ L LS
Sbjct: 164 NISHLSNLKELFLGKNKIRKIEGVESLKNLQVLSIPGNRLV--KIENVEELTNLKELYLS 221
Query: 87 GNQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQQFTS 123
+Q L + G+ L L LD+ + I T G+Q+ S
Sbjct: 222 -DQGLQDIHGVETLNKLTLLDVANNEIKTFDGVQKLAS 258
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L NL NL LDL I I GL KL LE L L +N +E L LT L++L+L
Sbjct: 98 NLENLVNLVSLDLSYNRIRQIVGLNKLNKLEVLYLVNNKI--EKIENLEGLTQLRLLELG 155
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
N+ +++L NLK L L I I+G++
Sbjct: 156 DNRIKNIENISHLSNLKELFLGKNKIRKIEGVE 188
>gi|315282127|ref|ZP_07870603.1| cell wall anchor domain-containing protein, partial [Listeria
marthii FSL S4-120]
gi|313614227|gb|EFR87895.1| cell wall anchor domain-containing protein [Listeria marthii FSL
S4-120]
Length = 429
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 66/130 (50%), Gaps = 30/130 (23%)
Query: 20 SGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL-----DLSSNYYLHGSLEG 73
SGS+T L GL TNLK L ++ IT + +AKL NL++L DL+S+ L L G
Sbjct: 80 SGSITDLTGLEAATNLKTLTINTKTITNYEAIAKLPNLDSLWIQNSDLTSS--LLPDLNG 137
Query: 74 LANLT---------------------NLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCG 111
L NLT NL LDLSGN+ +T L +L NL +L++ +C
Sbjct: 138 LTNLTTMSLSNNKLDNSVYPKIKNLPNLASLDLSGNKAITNFSELQSLVNLTSLNVTNCQ 197
Query: 112 ITTIQGIQQF 121
I + G+ F
Sbjct: 198 IDDLSGLDAF 207
>gi|301782563|ref|XP_002926698.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and IQ
domain-containing protein 1-like [Ailuropoda
melanoleuca]
Length = 1662
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+N + L+ +D N+ + + NL NL + L+ +T+ GL N++ L+
Sbjct: 838 LSNCKKLKHIDAQENH------IETISCENLENLCVVLLNKNQLTSFHGLDGCSNIQNLE 891
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
LS N + GL +L NLQ L + NQ ++T GL + P + LD +T ++GI+
Sbjct: 892 LSHNKITR--IGGLESLRNLQQLIVDHNQLISTKGLCDTPTIIYLDCSHNHLTKVEGIE 948
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 15 NYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEG 73
N ++ +TR+G L +L NL++L +D + + +GL + LD S N+ +EG
Sbjct: 889 NLELSHNKITRIGGLESLRNLQQLIVDHNQLISTKGLCDTPTIIYLDCSHNHLT--KVEG 946
Query: 74 LANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
+ N LQVL L GN L N L+ L L D I+T++ + +
Sbjct: 947 IENCGLLQVLKLEGNYLSELPSLENHVLLRELRLDDNNISTVEALSSY 994
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA NL+ L L CG+ ++ L+ K L+ +D N+ S E NL NL V+ L+
Sbjct: 816 LAECPNLQFLSLRRCGLISLHSLSNCKKLKHIDAQENHIETISCE---NLENLCVVLLNK 872
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
NQ + GL N++ L+L IT I G++
Sbjct: 873 NQLTSFHGLDGCSNIQNLELSHNKITRIGGLESL 906
>gi|170038669|ref|XP_001847171.1| leucine rich protein [Culex quinquefasciatus]
gi|167882370|gb|EDS45753.1| leucine rich protein [Culex quinquefasciatus]
Length = 416
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 63/114 (55%), Gaps = 6/114 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
L NL+YLQ + ++ N + S S+ G ANL +L L+L G I + + LA+L NL L
Sbjct: 186 LNNLKYLQKVQIT-NSKLISFSV---GQANLPSLFVLNLSGNRIQDVPEDLAQLSNLGEL 241
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLT-TLGLANLPNLKTLDLRDCGI 112
DL+ N + + L NLQ LDLS N + +G+ LP L+ L L+ C +
Sbjct: 242 DLAKNKITFLQMSVFSGLNNLQKLDLSYNPLIVGAIGVVQLPVLRDLSLQHCNL 295
>gi|363730863|ref|XP_418316.3| PREDICTED: leucine-rich repeat and coiled-coil domain-containing
protein 1 [Gallus gallus]
Length = 1024
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 18 ITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANL 77
+ G + L ++ ++L L++ I I+GL L+NL+ LDLSSN +EGL L
Sbjct: 14 VDKGVRSLLEVSLSSDLHTLNMHCNRIARIEGLGHLRNLQHLDLSSNQIRR--MEGLNAL 71
Query: 78 TNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
+L+ L+LS N GL L NL TL+L I + G Q
Sbjct: 72 ESLRSLNLSCNLITAVEGLEKLFNLTTLNLSHNHIHDLSGFQ 113
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 10/127 (7%)
Query: 4 LRYLQVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+R L + LS++ + + R+ GL +L NL+ LDL I ++GL L++L +L
Sbjct: 18 VRSLLEVSLSSDLHTLNMHCNRIARIEGLGHLRNLQHLDLSSNQIRRMEGLNALESLRSL 77
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLP----NLKTLDLRDCGITTI 115
+LS N L ++EGL L NL L+LS N G L + +DLR I I
Sbjct: 78 NLSCN--LITAVEGLEKLFNLTTLNLSHNHIHDLSGFQYLHGTHYKISCIDLRSNCINNI 135
Query: 116 QGIQQFT 122
+ Q T
Sbjct: 136 NHLLQCT 142
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 50/148 (33%), Positives = 65/148 (43%), Gaps = 46/148 (31%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L +LR LQ LDLS+N + R+ GL L +L+ L+L IT ++GL KL NL L
Sbjct: 46 LGHLRNLQHLDLSSN------QIRRMEGLNALESLRSLNLSCNLITAVEGLEKLFNLTTL 99
Query: 60 DLSSNY--------YLHGS-----------------------LEGLANLTNLQVLDLSGN 88
+LS N+ YLHG+ +GL LTNL L+ GN
Sbjct: 100 NLSHNHIHDLSGFQYLHGTHYKISCIDLRSNCINNINHLLQCTKGLQCLTNL-TLEKYGN 158
Query: 89 QNLTTLG-------LANLPNLKTLDLRD 109
N L LP L LD R+
Sbjct: 159 TNPVCYAAGYRETVLQALPQLAVLDGRN 186
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 35 KKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL 94
++L L G+ ++ ++ +L L++ N +EGL +L NLQ LDLS NQ
Sbjct: 9 EELSLVDKGVRSLLEVSLSSDLHTLNMHCNRI--ARIEGLGHLRNLQHLDLSSNQIRRME 66
Query: 95 GLANLPNLKTLDLRDCGITTIQGIQQF 121
GL L +L++L+L IT ++G+++
Sbjct: 67 GLNALESLRSLNLSCNLITAVEGLEKL 93
>gi|423516081|ref|ZP_17492562.1| hypothetical protein IG7_01151 [Bacillus cereus HuA2-4]
gi|401165924|gb|EJQ73234.1| hypothetical protein IG7_01151 [Bacillus cereus HuA2-4]
Length = 766
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ NL+ L V AN IT S ANL L L L G + + L K++NLE+LD
Sbjct: 241 MPNLKSLTV----ANAKITDPSF----FANLKQLNHLALRGNEFSDVTPLVKMENLESLD 292
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
LS+N ++ L + N++ L LSGNQ LA + L L+L + IT +
Sbjct: 293 LSNNKIT--NVAPLIEMKNVKSLYLSGNQIEDVTALAKMEQLNYLNLANNKITDV 345
>gi|296210588|ref|XP_002752018.1| PREDICTED: leucine-rich repeat and guanylate kinase
domain-containing protein [Callithrix jacchus]
Length = 823
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 34 LKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT 93
L KL LDG I I GL NL L L++N + + GL N ++ L LS NQ T
Sbjct: 218 LTKLILDGNKIEEISGLEMCNNLTHLSLANNKIM--KINGL-NTLPIKTLCLSNNQIETI 274
Query: 94 LGLANLPNLKTLDLRDCGITTIQGIQ 119
GL NL L+ LDL I+++QG++
Sbjct: 275 TGLENLKALQNLDLSHNQISSLQGLE 300
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 24 TRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH-GSLEGLANLTNLQV 82
T GL NL L+ LDL I+++QGL LE ++L N +E + NL L+V
Sbjct: 273 TITGLENLKALQNLDLSHNQISSLQGLENHDLLEVINLEDNKIAELREIEYIENLPILRV 332
Query: 83 LDLSGN 88
L+L N
Sbjct: 333 LNLLNN 338
>gi|456982914|gb|EMG19366.1| leucine rich repeat protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 432
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 68/120 (56%), Gaps = 13/120 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTIQ-GLAKLKNLE 57
+ LR LQ LDLS N SLT L + L NL++LDL + T+ + +LKNL+
Sbjct: 136 IGQLRNLQELDLSFN------SLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQ 189
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
LDL+SN L + + L NLQ LDL NQ LTTL + L NLKTL+L +TT+
Sbjct: 190 ELDLNSN-KLTTLPKEIRQLRNLQELDLHRNQ-LTTLPKEIGQLQNLKTLNLIVTQLTTL 247
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 28 LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+ L NL++LDL +TT+ + + +L+NL+ L L N L + + L NL+VLDL
Sbjct: 297 IGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQ-LTTLPKEIEQLQNLRVLDLD 355
Query: 87 GNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
NQ LTTL + L NL+ L L + +TT
Sbjct: 356 NNQ-LTTLPKEIGQLQNLQELCLDENQLTTF 385
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 28 LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+ L NLK LDL +T + + + +L+NL+ LDLS N L + + L NLQ L+L+
Sbjct: 67 IKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFN-SLTTLPKEVGQLENLQRLNLN 125
Query: 87 GNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
Q LTTL + L NL+ LDL +TT+
Sbjct: 126 S-QKLTTLPKEIGQLRNLQELDLSFNSLTTL 155
>gi|455791564|gb|EMF43371.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
str. TE 1992]
Length = 452
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 68/120 (56%), Gaps = 13/120 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTIQ-GLAKLKNLE 57
+ LR LQ LDLS N SLT L + L NL++LDL + T+ + +LKNL+
Sbjct: 67 IGQLRNLQELDLSFN------SLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQ 120
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
LDL+SN L + + L NLQ LDL NQ LTTL + L NLKTL+L +TT+
Sbjct: 121 ELDLNSN-KLTTLPKEIRQLRNLQELDLHRNQ-LTTLPKEIGQLQNLKTLNLIVTQLTTL 178
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ LQ LDL N T + L NL++LDL +TT+ + + +L+NL+ L
Sbjct: 251 IGQLQNLQRLDLHQNQLTTLPK----EIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQEL 306
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG 95
L N L + + L NL+VLDL NQ LTTL
Sbjct: 307 CLDENQ-LTTLPKEIEQLQNLRVLDLDNNQ-LTTLP 340
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 28 LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+ L NL+ LDLD +TT+ + + +L++L+ L L SN L + + L NLQVL L
Sbjct: 320 IEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNR-LSTLPKEIGQLQNLQVLGLI 378
Query: 87 GNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
NQ LTTL + L NL+ L L + +TT
Sbjct: 379 SNQ-LTTLPKEIGQLQNLQELCLDENQLTTF 408
>gi|423387697|ref|ZP_17364949.1| hypothetical protein ICE_05439, partial [Bacillus cereus BAG1X1-2]
gi|401627891|gb|EJS45747.1| hypothetical protein ICE_05439, partial [Bacillus cereus BAG1X1-2]
Length = 865
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L N++++ L + +IT G L +G LA L +++ L L I+ + L+++K ++ L
Sbjct: 257 LKNIKFISELRQLKSLSITYGELEDIGPLAELEHIEFLTLRNNKISDLSPLSQMKKIKML 316
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQG 117
DL+SNY ++ L + +L+ L ++ NQ N G+ L N+K L L + G+T I+
Sbjct: 317 DLNSNYI--KDIKPLFTVKSLRTLTVANNQISNDNLAGIEQLKNVKNLSLSNNGLTNIEH 374
Query: 118 I 118
I
Sbjct: 375 I 375
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 21/140 (15%)
Query: 1 LANLRYLQVLDLSANYN------ITSGSLTRLGLAN-------------LTNLKKLDLDG 41
L+ ++ +++LDL++NY T SL L +AN L N+K L L
Sbjct: 307 LSQMKKIKMLDLNSNYIKDIKPLFTVKSLRTLTVANNQISNDNLAGIEQLKNVKNLSLSN 366
Query: 42 CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
G+T I+ + +K L LDL+ N ++E L+ L+ +Q L+L N L++L +
Sbjct: 367 NGLTNIEHITSMKKLVELDLAKNEL--ENIEPLSRLSTVQSLNLEENYISDITPLSHLTD 424
Query: 102 LKTLDLRDCGITTIQGIQQF 121
L L L I ++ +Q+
Sbjct: 425 LYDLKLGSNEIRDVRPVQEL 444
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 11/126 (8%)
Query: 1 LANLRYLQVLDLSAN--YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L ++ L++L + N NIT GL +TNL+KL L+G G+ I+ ++ LK L
Sbjct: 580 LLQIKKLEILKENGNEIKNIT-------GLEYMTNLEKLTLEGVGLKNIEFISNLKQLNN 632
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
+++S N + L++L NLQ L+L+ N + ++ NL +L+L I ++ +
Sbjct: 633 VNVSHNQI--EDITPLSSLENLQWLNLADNHIKDVTVIGSMLNLFSLNLAGNEIRDVRPL 690
Query: 119 QQFTSY 124
Q +
Sbjct: 691 IQLGQW 696
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 20 SGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTN 79
+ S+T+ L + L+ L +G I I GL + NLE L L ++E ++NL
Sbjct: 572 NASITKKDLLQIKKLEILKENGNEIKNITGLEYMTNLEKLTLEGVGL--KNIEFISNLKQ 629
Query: 80 LQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L +++S NQ L++L NL+ L+L D I + I
Sbjct: 630 LNNVNVSHNQIEDITPLSSLENLQWLNLADNHIKDVTVI 668
>gi|419971258|ref|ZP_14486716.1| leucine rich repeat protein, partial [Porphyromonas gingivalis W50]
gi|392608977|gb|EIW91803.1| leucine rich repeat protein, partial [Porphyromonas gingivalis W50]
Length = 277
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +LT+L KL L I+ ++GL +L +L L L N LEGL LT+L L LS
Sbjct: 138 GLDSLTSLTKLSLSDNQISKLEGLERLTSLAELYLLDNQI--SKLEGLERLTSLTELYLS 195
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
GNQ GL L +L L LR I ++G+ TS
Sbjct: 196 GNQISKLEGLERLTSLTKLRLRSNQIRKLEGLDSLTS 232
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 9 VLDLSANYNITSGSLT-RLGLANLTN----------LKKLDLDGCGITTIQGLAKLKNLE 57
+LDL YNI L+ + G++ N + +L L C I ++ L L+
Sbjct: 43 ILDLEKAYNIEIPDLSSQEGISWSVNRYFKQDSSGAVVELCLRECQIESMTWLIDFPALK 102
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQG 117
LDLS N LEGL LT+L L L NQ GL +L +L L L D I+ ++G
Sbjct: 103 KLDLSYNQI--SKLEGLERLTSLTKLRLRSNQIRKLEGLDSLTSLTKLSLSDNQISKLEG 160
Query: 118 IQQFTS 123
+++ TS
Sbjct: 161 LERLTS 166
>gi|260782372|ref|XP_002586262.1| hypothetical protein BRAFLDRAFT_109348 [Branchiostoma floridae]
gi|229271361|gb|EEN42273.1| hypothetical protein BRAFLDRAFT_109348 [Branchiostoma floridae]
Length = 1042
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
++ + LQ D +I L R+ G++ L L+ L+L I TI+G+ +L+ LE L
Sbjct: 29 ISRIDNLQTQDQIQQLSIAGNRLVRMVGVSQLPYLRVLNLPNNSIVTIEGVKQLQQLEWL 88
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
+LS N L L++ L LD+S N + L+ L LKTL L +TT++ +
Sbjct: 89 NLSGNSI--KDLTPLSSCMGLSHLDVSDNSISSIADLSRLTGLKTLLLHGNILTTLRSV 145
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 34 LKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT 93
+++L + G + + G+++L L L+L +N + ++EG+ L L+ L+LSGN
Sbjct: 41 IQQLSIAGNRLVRMVGVSQLPYLRVLNLPNNSIV--TIEGVKQLQQLEWLNLSGNSIKDL 98
Query: 94 LGLANLPNLKTLDLRDCGITTIQGIQQFT 122
L++ L LD+ D I++I + + T
Sbjct: 99 TPLSSCMGLSHLDVSDNSISSIADLSRLT 127
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 32/51 (62%)
Query: 71 LEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
++ L +Q L ++GN+ + +G++ LP L+ L+L + I TI+G++Q
Sbjct: 32 IDNLQTQDQIQQLSIAGNRLVRMVGVSQLPYLRVLNLPNNSIVTIEGVKQL 82
>gi|294946343|ref|XP_002785029.1| U2 small nuclear ribonucleoprotein A, putative [Perkinsus marinus
ATCC 50983]
gi|239898421|gb|EER16825.1| U2 small nuclear ribonucleoprotein A, putative [Perkinsus marinus
ATCC 50983]
Length = 228
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
++K+ L GI+ I LA L NLE L L +NY + L L NL LDLS NQ
Sbjct: 28 FPRVRKMRLSFSGISRISNLATLHNLEVLYLDNNYI--DKISNLECLPNLMWLDLSFNQI 85
Query: 91 LTTLGLANLPNLKTLDLRDCGITTIQGI 118
GL LP L+ L L + IT I G+
Sbjct: 86 TKIEGLEKLPKLQDLSLFNNLITEISGL 113
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA L NL+ L LD I I L L NL LDLS N +EGL L LQ L L
Sbjct: 47 LATLHNLEVLYLDNNYIDKISNLECLPNLMWLDLSFNQIT--KIEGLEKLPKLQDLSLFN 104
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
N GL P L L L I ++ ++ +
Sbjct: 105 NLITEISGLDGCPELTVLSLGRNRIRDLRHVEYLRRF 141
>gi|378731305|gb|EHY57764.1| adenylate cyclase [Exophiala dermatitidis NIH/UT8656]
Length = 409
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NL NL ++L I I+ L L NL L L N ++GL +LTNL++LD+
Sbjct: 226 LENLDNLTMIELGANRIREIENLEPLHNLRELWLGKNKI--TEIKGLNSLTNLRLLDIKS 283
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQG 117
N+ T GL LPNL+ L + GIT I
Sbjct: 284 NRLTTISGLDTLPNLEELYVSHNGITEISA 313
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +LTNL+ LD+ +TTI GL L NLE L +S N S LAN L+VLD+S
Sbjct: 269 GLNSLTNLRLLDIKSNRLTTISGLDTLPNLEELYVSHNGITEISATALANNPKLRVLDIS 328
Query: 87 GNQNLTTLGLANLPNLKTLD 106
NQ LAN+ +L+ L+
Sbjct: 329 NNQ---ISHLANIGHLQDLE 345
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L L NL++L L IT I+GL L NL LD+ SN ++ GL L NL+ L +S
Sbjct: 248 LEPLHNLRELWLGKNKITEIKGLNSLTNLRLLDIKSNRL--TTISGLDTLPNLEELYVSH 305
Query: 88 N--QNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
N ++ LAN P L+ LD+ + I+ + I
Sbjct: 306 NGITEISATALANNPKLRVLDISNNQISHLANI 338
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 34 LKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH--------------------GSLEG 73
L++LDL I+ I+GL +KNL +LDLS N H +E
Sbjct: 166 LQELDLYDNLISHIKGLEDMKNLTSLDLSFNKIKHIKNVNHLQKLKELYFVQNRISKIEN 225
Query: 74 LANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
L NL NL +++L N+ L L NL+ L L IT I+G+ T
Sbjct: 226 LENLDNLTMIELGANRIREIENLEPLHNLRELWLGKNKITEIKGLNSLT 274
>gi|421127271|ref|ZP_15587495.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421136024|ref|ZP_15596135.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410019758|gb|EKO86572.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410435361|gb|EKP84493.1| leucine rich repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
Length = 659
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 68/120 (56%), Gaps = 13/120 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTIQ-GLAKLKNLE 57
+ LR LQ LDLS N SLT L + L NL++LDL + T+ + +LKNL+
Sbjct: 251 IGQLRNLQWLDLSFN------SLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQ 304
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
LDL+SN L + + L NLQ LDL NQ LTTL + L NLKTL+L +TT+
Sbjct: 305 ELDLNSN-KLTTLPKEIRQLRNLQELDLHRNQ-LTTLPKEIGQLQNLKTLNLIVTQLTTL 362
>gi|170756553|ref|YP_001781521.1| internalin [Clostridium botulinum B1 str. Okra]
gi|169121765|gb|ACA45601.1| leucine-rich repeat protein [Clostridium botulinum B1 str. Okra]
Length = 331
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
++ L NL+ L++ C + + + LK L+ LD+S+N +L GL NLTNL+ L +S
Sbjct: 141 VSTLKNLENLEIVDCKLNDVSIVKNLKRLKRLDISNNEI--SNLNGLENLTNLKELYMSN 198
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N + NL NL LD+ D IT+I+ ++ S
Sbjct: 199 NNIANLKPIHNLLNLTNLDISDNKITSIKELKNMKS 234
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL L+++D N S+ + NL LK+LD+ I+ + GL L NL+ L
Sbjct: 144 LKNLENLEIVDCKLN----DVSIVK----NLKRLKRLDISNNEISNLNGLENLTNLKELY 195
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+S+N +L+ + NL NL LD+S N+ + L N+ ++K L++ + ++ ++GI+
Sbjct: 196 MSNNNI--ANLKPIHNLLNLTNLDISDNKITSIKELKNMKSIKELNICNNNLSNLEGIEN 253
Query: 121 FT 122
+
Sbjct: 254 MS 255
>gi|326534254|dbj|BAJ89477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1062
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDL---DGCGITTIQGLAKLKNLE 57
A+L L++LDLS +N +G L R A+L NL+ LDL + CG+ + A L NLE
Sbjct: 430 FASLGKLELLDLS--HNKFNGVLLREHFASLGNLRLLDLSYNNFCGVLWKEHFASLGNLE 487
Query: 58 ALDLSSNYYLHGSL-EGLANLTNLQVLDLSGNQ---NLTTLGLANLPNLKTLDL 107
LDLS N + + L E +L NL+ LD S N+ LT A L NL+ LDL
Sbjct: 488 KLDLSYNNFSNFLLKEYSTSLGNLRHLDFSHNKLNGVLTEEHFAGLLNLEYLDL 541
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 62/128 (48%), Gaps = 17/128 (13%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL------GLANLTNLKKLDLD----GCGITTIQGL 50
L NL LQ LDLS N N + R L L+ L+ LD+ G + +
Sbjct: 170 LGNLSKLQYLDLSWNSNYVDWNWNRFYIVDLAWLPRLSLLRHLDMSYVDLGSARDWFRSV 229
Query: 51 AKLKNLEALDLSS---NYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLA---NLPNLKT 104
L +L+ L LSS N + GS+ NLTNL+VLD+S N T+L A NL LK
Sbjct: 230 NMLPSLKVLGLSSCGLNSTMSGSIPH-PNLTNLEVLDMSENTFHTSLKHAWFWNLTGLKE 288
Query: 105 LDLRDCGI 112
L L D G+
Sbjct: 289 LHLSDSGL 296
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 12 LSANYNITSGSLTRLGLANLTNLKKLDL---DGCGITTIQGLAKLKNLEALDLSSNYYLH 68
L A NI +G L G+ L NLK LD+ + G+ + + A L LE LDLS N + +
Sbjct: 390 LQARRNILTGPLPE-GVGALGNLKMLDISYNNFSGVFSKEQFASLGKLELLDLSHNKF-N 447
Query: 69 GSL--EGLANLTNLQVLDLSGNQNLTTLG---LANLPNLKTLDL 107
G L E A+L NL++LDLS N L A+L NL+ LDL
Sbjct: 448 GVLLREHFASLGNLRLLDLSYNNFCGVLWKEHFASLGNLEKLDL 491
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 28 LANLTNLKKLDL---DGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLD 84
LA L +L+ LDL D G + LA LKNL L+LSS + L NL+ LQ LD
Sbjct: 121 LATLQHLRYLDLSWNDFKGTSIPVFLASLKNLRYLNLSSAGFSGRIPSQLGNLSKLQYLD 180
Query: 85 LSGNQN--------LTTLGLANLPNLKTL 105
LS N N + LA LP L L
Sbjct: 181 LSWNSNYVDWNWNRFYIVDLAWLPRLSLL 209
>gi|423607623|ref|ZP_17583516.1| hypothetical protein IIK_04204, partial [Bacillus cereus VD102]
gi|401239997|gb|EJR46402.1| hypothetical protein IIK_04204, partial [Bacillus cereus VD102]
Length = 814
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L N++++ L + +IT G L +G LA L +++ L L I+ + L+++K ++ L
Sbjct: 257 LENIKFISDLRQLKSLSITYGELEDIGPLAELEHIESLSLRNNKISDLSPLSQMKKIKLL 316
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQG 117
DL+SNY ++ L +L+ L ++ NQ N G+ L N+K+L L + G+T I+
Sbjct: 317 DLNSNYI--KDIKPLFTAKSLRTLTVANNQISNANLAGIEQLKNVKSLSLSNNGLTNIEH 374
Query: 118 I 118
I
Sbjct: 375 I 375
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 21/140 (15%)
Query: 1 LANLRYLQVLDLSANYN------ITSGSLTRLGLAN-------------LTNLKKLDLDG 41
L+ ++ +++LDL++NY T+ SL L +AN L N+K L L
Sbjct: 307 LSQMKKIKLLDLNSNYIKDIKPLFTAKSLRTLTVANNQISNANLAGIEQLKNVKSLSLSN 366
Query: 42 CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
G+T I+ + +K L LDLS N ++E L+ ++ +Q L+L N L+ L
Sbjct: 367 NGLTNIEHITPMKKLVELDLSKNEL--ENIEPLSRMSTVQSLNLEENYISDITPLSQLTG 424
Query: 102 LKTLDLRDCGITTIQGIQQF 121
L L L I ++ +Q+
Sbjct: 425 LYDLKLASNEIRDVRPVQEL 444
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLE---GLANLTNLQVL 83
GL + NL+KL L+G G+ I+ + +K L L++S H +E L++L NLQ L
Sbjct: 597 GLEYMMNLEKLTLEGVGLKNIEFILNMKQLNNLNVS-----HNQIEDTTPLSSLKNLQWL 651
Query: 84 DLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
+L+ N+ L ++ +L +L L + I ++ + Q +
Sbjct: 652 NLTDNRIKDVSVLGSMLDLLSLKLAENEIRDVRPLIQLGQW 692
>gi|3462807|gb|AAC33104.1| I-1 receptor candidate protein [Homo sapiens]
gi|119585633|gb|EAW65229.1| nischarin, isoform CRA_b [Homo sapiens]
gi|158256232|dbj|BAF84087.1| unnamed protein product [Homo sapiens]
Length = 1504
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY 66
L LDLS N S S + + ++ LDL G+ + L L NL LDLS N
Sbjct: 289 LTTLDLSHN----SISEIDESVKLIPKIEFLDLSHNGLLVVDNLQHLYNLVHLDLSYNKL 344
Query: 67 LHGSLEGL-ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
SLEGL L N++ L+L+GN + GL L +L LDLRD I ++ ++ S
Sbjct: 345 --SSLEGLHTKLGNIKTLNLAGNLLESLSGLHKLYSLVNLDLRDNRIEQMEEVRSIGS 400
>gi|66472382|ref|NP_009115.2| nischarin isoform 1 [Homo sapiens]
Length = 1504
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY 66
L LDLS N S S + + ++ LDL G+ + L L NL LDLS N
Sbjct: 289 LTTLDLSHN----SISEIDESVKLIPKIEFLDLSHNGLLVVDNLQHLYNLVHLDLSYNKL 344
Query: 67 LHGSLEGL-ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
SLEGL L N++ L+L+GN + GL L +L LDLRD I ++ ++ S
Sbjct: 345 --SSLEGLHTKLGNIKTLNLAGNLLESLSGLHKLYSLVNLDLRDNRIEQMEEVRSIGS 400
>gi|410224056|gb|JAA09247.1| nischarin [Pan troglodytes]
gi|410248934|gb|JAA12434.1| nischarin [Pan troglodytes]
gi|410295772|gb|JAA26486.1| nischarin [Pan troglodytes]
gi|410341669|gb|JAA39781.1| nischarin [Pan troglodytes]
Length = 1504
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY 66
L LDLS N S S + + ++ LDL G+ + L L NL LDLS N
Sbjct: 289 LTTLDLSHN----SISEIDESVKLIPKIEFLDLSHNGLLVVDNLQHLYNLVHLDLSYNKL 344
Query: 67 LHGSLEGL-ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
SLEGL L N++ L+L+GN + GL L +L LDLRD I ++ ++ S
Sbjct: 345 --SSLEGLHTKLGNIKTLNLAGNLLESLSGLHKLYSLVNLDLRDNRIEQMEEVRSIGS 400
>gi|402859861|ref|XP_003894355.1| PREDICTED: nischarin isoform 1 [Papio anubis]
gi|402859863|ref|XP_003894356.1| PREDICTED: nischarin isoform 2 [Papio anubis]
Length = 1501
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY 66
L LDLS N S S + + ++ LDL G+ + L L NL LDLS N
Sbjct: 289 LTTLDLSHN----SISEIDESVKLIPKIEFLDLSHNGLLVVDNLQHLYNLVHLDLSYNKL 344
Query: 67 LHGSLEGL-ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
SLEGL L N++ L+L+GN + GL L +L LDLRD I ++ ++ S
Sbjct: 345 --SSLEGLHTKLGNIKTLNLAGNLLESLSGLHKLYSLVNLDLRDNRIEQMEEVRSIGS 400
>gi|383415487|gb|AFH30957.1| nischarin [Macaca mulatta]
Length = 1502
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY 66
L LDLS N S S + + ++ LDL G+ + L L NL LDLS N
Sbjct: 289 LTTLDLSHN----SISEIDESVKLIPKIEFLDLSHNGLLVVDNLQHLYNLVHLDLSYNKL 344
Query: 67 LHGSLEGL-ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
SLEGL L N++ L+L+GN + GL L +L LDLRD I ++ ++ S
Sbjct: 345 --SSLEGLHTKLGNIKTLNLAGNLLESLSGLHKLYSLVNLDLRDNRIEQMEEVRSIGS 400
>gi|380809220|gb|AFE76485.1| nischarin [Macaca mulatta]
Length = 1502
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY 66
L LDLS N S S + + ++ LDL G+ + L L NL LDLS N
Sbjct: 289 LTTLDLSHN----SISEIDESVKLIPKIEFLDLSHNGLLVVDNLQHLYNLVHLDLSYNKL 344
Query: 67 LHGSLEGL-ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
SLEGL L N++ L+L+GN + GL L +L LDLRD I ++ ++ S
Sbjct: 345 --SSLEGLHTKLGNIKTLNLAGNLLESLSGLHKLYSLVNLDLRDNRIEQMEEVRSIGS 400
>gi|45656721|ref|YP_000807.1| lipoprotein [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|421102937|ref|ZP_15563539.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45599957|gb|AAS69444.1| putative lipoprotein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|410367252|gb|EKP22638.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
Length = 521
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 68/120 (56%), Gaps = 13/120 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTIQ-GLAKLKNLE 57
+ LR LQ LDLS N SLT L + L NL++LDL + T+ + +LKNL+
Sbjct: 228 IGQLRNLQELDLSFN------SLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQ 281
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
LDL+SN L + + L NLQ LDL NQ LTTL + L NLKTL+L +TT+
Sbjct: 282 ELDLNSN-KLTTLPKEIRQLRNLQELDLHRNQ-LTTLPKEIGQLQNLKTLNLIVTQLTTL 339
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 69/120 (57%), Gaps = 13/120 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTI-QGLAKLKNLE 57
+ LR LQ LDLS N SLT L + L NL++L+L+ +TT+ + + +L+NL+
Sbjct: 136 IGQLRNLQELDLSFN------SLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQ 189
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
LDLS N L + + L NLQ L+L+ Q LTTL + L NL+ LDL +TT+
Sbjct: 190 ELDLSFN-SLTTLPKEVGQLENLQRLNLNS-QKLTTLPKEIGQLRNLQELDLSFNSLTTL 247
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 28 LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+ L NL++LDL +TT+ + + +L+NL+ L L N L + + L NL+VLDL
Sbjct: 389 IGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQ-LTTLPKEIEQLQNLRVLDLD 447
Query: 87 GNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
NQ LTTL + L NL+ L L + +TT
Sbjct: 448 NNQ-LTTLPKEIGQLQNLQELCLDENQLTTF 477
>gi|390364778|ref|XP_001200118.2| PREDICTED: leucine-rich repeat and IQ domain-containing protein
1-like [Strongylocentrotus purpuratus]
Length = 1753
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 12/101 (11%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTN---LQVL 83
GL +L +L+ LDL +++++GL + L+ LDLSSN SL NL+N L+ L
Sbjct: 928 GLTSLVHLQDLDLTSNHLSSVRGLDQCPLLQRLDLSSN-----SLSQTPNLSNNVLLRSL 982
Query: 84 DLSGNQNLTTLGLAN---LPNLKTLDLRDCGITTIQGIQQF 121
L+GN +L+TLG LP L+ LDL G++ + ++ F
Sbjct: 983 SLAGN-SLSTLGDFTSMWLPLLQHLDLSQNGLSELAPLKSF 1022
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 17 NITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
N++ +TR+ G+ +L +L LDL + + GL L +L+ LDL+SN+ S+ GL
Sbjct: 895 NLSQNKITRISGVESLLSLTHLDLGHNQLVNVSGLTSLVHLQDLDLTSNHL--SSVRGLD 952
Query: 76 NLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
LQ LDLS N T L+N L++L L ++T+
Sbjct: 953 QCPLLQRLDLSSNSLSQTPNLSNNVLLRSLSLAGNSLSTL 992
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
+T++QGL L L+LS N + G+ +L +L LDL NQ + GL +L +L+
Sbjct: 879 LTSLQGLEGCSQLRKLNLSQNKITR--ISGVESLLSLTHLDLGHNQLVNVSGLTSLVHLQ 936
Query: 104 TLDLRDCGITTIQGIQQ 120
LDL +++++G+ Q
Sbjct: 937 DLDLTSNHLSSVRGLDQ 953
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 25/126 (19%)
Query: 18 ITSGSLTRLGLANLTNLKK------LDLDGCGITTIQGLAKLKNLEALDLSSN------- 64
+T+ L L ++LT+L K L L+ CG+T ++ L + ++ +D+S N
Sbjct: 804 VTTVQLKDLPGSSLTSLMKCQRLRTLTLNNCGVTALESLDESPDILWIDVSHNKIESVLC 863
Query: 65 ------------YYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGI 112
+ + SL+GL + L+ L+LS N+ G+ +L +L LDL +
Sbjct: 864 RDRRVLSGVDASWNVLTSLQGLEGCSQLRKLNLSQNKITRISGVESLLSLTHLDLGHNQL 923
Query: 113 TTIQGI 118
+ G+
Sbjct: 924 VNVSGL 929
>gi|55742306|ref|NP_001006731.1| protein phosphatase 1 regulatory subunit 7 [Xenopus (Silurana)
tropicalis]
gi|82236008|sp|Q6DIQ3.1|PP1R7_XENTR RecName: Full=Protein phosphatase 1 regulatory subunit 7; AltName:
Full=Protein phosphatase 1 regulatory subunit 22
gi|49670663|gb|AAH75482.1| protein phosphatase 1, regulatory subunit 7 [Xenopus (Silurana)
tropicalis]
Length = 346
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 1 LANLRYLQVLDLSAN--YNITS----GSLTRLGLAN-----------LTNLKKLDLDGCG 43
L LR LQ+LDLS N I L RL L N LT L+ L+L
Sbjct: 124 LETLRDLQILDLSFNLLRRIEGLESLSHLQRLYLVNNKISRIENFGTLTQLRLLELGSNR 183
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
+ I+ L L+ L++L L N L+ L LTNL VL + N+ GL NL NL+
Sbjct: 184 LRVIENLDSLRELDSLFLGKNKI--TKLQNLETLTNLTVLSVQSNRLTKIEGLQNLVNLR 241
Query: 104 TLDLRDCGITTIQGIQ 119
L L D GI I+G++
Sbjct: 242 ELYLSDNGIQVIEGLE 257
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 28 LANLTNLKKLD---LDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLD 84
+ NL +L++LD L IT +Q L L NL L + SN +EGL NL NL+ L
Sbjct: 187 IENLDSLRELDSLFLGKNKITKLQNLETLTNLTVLSVQSNRL--TKIEGLQNLVNLRELY 244
Query: 85 LSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
LS N GL N L TLDL I I+ I+ +
Sbjct: 245 LSDNGIQVIEGLENNNKLTTLDLASNRIKRIENIKHLSE 283
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 18 ITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
+ S LT++ GL NL NL++L L GI I+GL L LDL+SN +E + +
Sbjct: 223 VQSNRLTKIEGLQNLVNLRELYLSDNGIQVIEGLENNNKLTTLDLASNRI--KRIENIKH 280
Query: 77 LTNLQVLDLSGN--QNLTTL-GLANLPNLKTL 105
L+ LQ ++ N +N + L L+ P L+T+
Sbjct: 281 LSELQEFWMNDNLVENWSDLEELSGAPGLQTV 312
>gi|86438846|emb|CAJ44363.1| putative CC-NBS-LRR resistance protein [Malus x domestica]
Length = 941
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 6 YLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG-LAKLKNLEALDLSSN 64
+LQ S + + + + ++N +L+ L L+ GITT+ L K+K+L LDLS N
Sbjct: 554 FLQQQHFSGHQSSSLNAFNTTIVSNFKSLRMLSLNELGITTLPNCLRKMKHLRYLDLSGN 613
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDC--------GITT 114
Y + + + L+NL+ LDL+ NL L + + NL+ L L C GI
Sbjct: 614 YGIKRLPDWIVGLSNLETLDLTRCFNLVELPRDIKKMINLRNLILEGCDGLSGMPRGIGE 673
Query: 115 IQGIQQFTSY 124
++G++ +
Sbjct: 674 LKGVRTLNRF 683
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 15/115 (13%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCG--ITTIQGLAKLKNL 56
L +++L+ LDLS NY I RL + L+NL+ LDL C + + + K+ NL
Sbjct: 599 LRKMKHLRYLDLSGNYGI-----KRLPDWIVGLSNLETLDLTRCFNLVELPRDIKKMINL 653
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLD---LSGNQNL---TTLGLANLPNLKTL 105
L L L G G+ L ++ L+ LS + L + GLA L +LK L
Sbjct: 654 RNLILEGCDGLSGMPRGIGELKGVRTLNRFVLSESNCLGRGGSAGLAELGSLKEL 708
>gi|423486542|ref|ZP_17463224.1| hypothetical protein IEU_01165 [Bacillus cereus BtB2-4]
gi|423492266|ref|ZP_17468910.1| hypothetical protein IEW_01164 [Bacillus cereus CER057]
gi|423500943|ref|ZP_17477560.1| hypothetical protein IEY_04170 [Bacillus cereus CER074]
gi|401154267|gb|EJQ61685.1| hypothetical protein IEY_04170 [Bacillus cereus CER074]
gi|401156550|gb|EJQ63954.1| hypothetical protein IEW_01164 [Bacillus cereus CER057]
gi|402439323|gb|EJV71330.1| hypothetical protein IEU_01165 [Bacillus cereus BtB2-4]
Length = 766
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ NL+ L V AN IT S ANL L L L G + + L K++NLE+LD
Sbjct: 241 MPNLKSLTV----ANAKITDPSF----FANLKQLNHLALRGNEFSDVTPLVKMENLESLD 292
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
LS+N ++ L + N++ L LSGNQ LA + L L+L + IT +
Sbjct: 293 LSNNKIT--NVAPLIEMKNVKSLYLSGNQIEDVTALAKMEQLDYLNLANNKITDV 345
>gi|229010725|ref|ZP_04167922.1| Internalin [Bacillus mycoides DSM 2048]
gi|228750399|gb|EEM00228.1| Internalin [Bacillus mycoides DSM 2048]
Length = 760
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ NL+ L V AN IT S ANL L L L G + + L K++NLE+LD
Sbjct: 241 MPNLKSLTV----ANAKITDPSF----FANLKQLNHLALRGNEFSDVTPLVKMENLESLD 292
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
LS+N ++ L + N++ L LSGNQ LA + L L+L + IT +
Sbjct: 293 LSNNKIT--NVAPLIEMKNVKSLYLSGNQIEDVTALAKMEQLDYLNLANNKITDV 345
>gi|229132224|ref|ZP_04261081.1| Internalin [Bacillus cereus BDRD-ST196]
gi|228651272|gb|EEL07250.1| Internalin [Bacillus cereus BDRD-ST196]
Length = 766
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ NL+ L V AN IT S ANL L L L G + + L K++NLE+LD
Sbjct: 241 MPNLKSLTV----ANAKITDPSF----FANLKQLNHLALRGNEFSDVTPLVKMENLESLD 292
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
LS+N ++ L + N++ L LSGNQ LA + L L+L + IT +
Sbjct: 293 LSNNKIT--NVAPLIEMKNVKSLYLSGNQIEDVTALAKMEQLDYLNLANNKITDV 345
>gi|46445682|ref|YP_007047.1| hypothetical protein pc0048 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399323|emb|CAF22772.1| hypothetical protein pc0048 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 531
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 66/130 (50%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA-- 58
L N + L+ L L A +N+T L L +LTNL+ L+L C T +GLA K+L A
Sbjct: 317 LKNCKNLKALHLQACHNLTDDGLA--SLTSLTNLQYLNLSCCDKLTNKGLAHFKSLIALQ 374
Query: 59 -LDLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
L+LS ++ L L L LQ L+LSG +T GLA+L L+ L+L C
Sbjct: 375 YLNLSGCAFITDAGLAHLKPLVALQYLNLSGCAFITDAGLAHLKPLVALQYLNLSGCAFI 434
Query: 114 TIQGIQQFTS 123
T G+ T
Sbjct: 435 TDAGLAHLTP 444
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L +L LQ L+LS +T+ L +L L+ L+L GC T GLA LK L AL
Sbjct: 342 LTSLTNLQYLNLSCCDKLTNKGLAHFK--SLIALQYLNLSGCAFITDAGLAHLKPLVALQ 399
Query: 60 --DLSSNYYLHGS-LEGLANLTNLQVLDLSGNQNLTTLGLANL-P--NLKTLDLRDCGIT 113
+LS ++ + L L L LQ L+LSG +T GLA+L P LK LDL C
Sbjct: 400 YLNLSGCAFITDAGLAHLKPLVALQYLNLSGCAFITDAGLAHLTPLVTLKHLDLSWCNSL 459
Query: 114 TIQGIQQFTS 123
T G+++ S
Sbjct: 460 TNAGLERLAS 469
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLA---KLKNLEALDLS- 62
++ L+ S N ++T L L L N NLK L L C T GLA L NL+ L+LS
Sbjct: 298 IEKLNFSENAHLTDAHL--LALKNCKNLKALHLQACHNLTDDGLASLTSLTNLQYLNLSC 355
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQGIQ 119
+ + L +L LQ L+LSG +T GLA+L L+ L+L C T G+
Sbjct: 356 CDKLTNKGLAHFKSLIALQYLNLSGCAFITDAGLAHLKPLVALQYLNLSGCAFITDAGLA 415
Query: 120 Q 120
Sbjct: 416 H 416
>gi|423667107|ref|ZP_17642136.1| hypothetical protein IKO_00804 [Bacillus cereus VDM034]
gi|423676859|ref|ZP_17651798.1| hypothetical protein IKS_04402 [Bacillus cereus VDM062]
gi|401304551|gb|EJS10103.1| hypothetical protein IKO_00804 [Bacillus cereus VDM034]
gi|401307120|gb|EJS12577.1| hypothetical protein IKS_04402 [Bacillus cereus VDM062]
Length = 760
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ NL+ L V AN IT S ANL L L L G + + L K++NLE+LD
Sbjct: 241 MPNLKSLTV----ANAKITDPSF----FANLKQLNHLALRGNEFSDVTPLVKMENLESLD 292
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
LS+N ++ L + N++ L LSGNQ LA + L L+L + IT +
Sbjct: 293 LSNNKIT--NVAPLIEMKNVKSLYLSGNQIEDVTALAKMEQLDYLNLANNKITDV 345
>gi|423366834|ref|ZP_17344267.1| hypothetical protein IC3_01936 [Bacillus cereus VD142]
gi|401087016|gb|EJP95231.1| hypothetical protein IC3_01936 [Bacillus cereus VD142]
Length = 760
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ NL+ L V AN IT S ANL L L L G + + L K++NLE+LD
Sbjct: 241 MPNLKSLTV----ANAKITDPSF----FANLKQLNHLALRGNEFSDVTPLVKMENLESLD 292
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
LS+N ++ L + N++ L LSGNQ LA + L L+L + IT +
Sbjct: 293 LSNNKIT--NVAPLIEMKNVKSLYLSGNQIEDVTALAKMEQLDYLNLANNKITDV 345
>gi|355707326|gb|AES02924.1| nischarin [Mustela putorius furo]
Length = 1514
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY 66
L LDLS N S S + + ++ LDL G+ + L L NL LDLS N
Sbjct: 267 LTTLDLSHN----SISEIDESVKLIPKIEFLDLSHNGVLVVDNLQHLYNLVHLDLSYNKL 322
Query: 67 LHGSLEGL-ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
SLEG+ L N++ L+L+GN + GL L +L +LDLRD I ++ ++ S
Sbjct: 323 --SSLEGVHTKLGNIKTLNLAGNLLESLSGLHKLYSLVSLDLRDNRIEQLEEVRSIGS 378
>gi|229166263|ref|ZP_04294022.1| Internalin [Bacillus cereus AH621]
gi|423594649|ref|ZP_17570680.1| hypothetical protein IIG_03517 [Bacillus cereus VD048]
gi|228617208|gb|EEK74274.1| Internalin [Bacillus cereus AH621]
gi|401223601|gb|EJR30169.1| hypothetical protein IIG_03517 [Bacillus cereus VD048]
Length = 766
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ NL+ L V AN IT S ANL L L L G + + L K++NLE+LD
Sbjct: 241 MPNLKSLTV----ANAKITDPSF----FANLKQLNHLALRGNEFSDVTPLVKMENLESLD 292
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
LS+N ++ L + N++ L LSGNQ LA + L L+L + IT +
Sbjct: 293 LSNNKIT--NVAPLIEMKNVKSLYLSGNQIEDVTALAKMEQLDYLNLANNKITDV 345
>gi|163939236|ref|YP_001644120.1| NEAr transporter [Bacillus weihenstephanensis KBAB4]
gi|163861433|gb|ABY42492.1| NEAr transporter [Bacillus weihenstephanensis KBAB4]
Length = 766
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ NL+ L V AN IT S ANL L L L G + + L K++NLE+LD
Sbjct: 241 MPNLKSLTV----ANAKITDPSF----FANLKQLNHLALRGNEFSDVTPLVKMENLESLD 292
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
LS+N ++ L + N++ L LSGNQ LA + L L+L + IT +
Sbjct: 293 LSNNKIT--NVAPLIEMKNVKSLYLSGNQIEDVTALAKMEQLDYLNLANNKITDV 345
>gi|242089917|ref|XP_002440791.1| hypothetical protein SORBIDRAFT_09g006650 [Sorghum bicolor]
gi|241946076|gb|EES19221.1| hypothetical protein SORBIDRAFT_09g006650 [Sorghum bicolor]
Length = 608
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 31/114 (27%)
Query: 32 TNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANL-TNLQVLDLSGN-- 88
++L LDL C ++ + L K+KNLE LDLS N G++E +A L TNLQ L L
Sbjct: 287 SSLTHLDLSSCKLSNLSFLEKMKNLEHLDLSYNIITDGAIEHIAKLGTNLQYLSLKNTGI 346
Query: 89 ------------QNLTTLGLAN-------------LPNLKTLDLRDCGITTIQG 117
NLT+L LAN +P L+T+DL T+I+G
Sbjct: 347 TSQALCILAGTVPNLTSLSLANTKIDDSALAYIGMIPLLRTIDLSQ---TSIKG 397
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT---IQGLAKLKNLE 57
L + R+L+VL L+ NI + ++ L+ + LK LDL C + I+ + +++LE
Sbjct: 93 LGSFRFLRVLTLADCKNIDNDAV--WSLSGMNTLKDLDLSRCKKISDAGIKHIVTIESLE 150
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LS + + +++LTNL LDL G
Sbjct: 151 KLHLSETELTNNGVMLISSLTNLSFLDLGG 180
>gi|32472792|ref|NP_865786.1| internalin [Rhodopirellula baltica SH 1]
gi|32444029|emb|CAD73471.1| internalin [Rhodopirellula baltica SH 1]
Length = 400
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 7/115 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+A+L+ LQ + L AN I S +A L ++ LD+ G +T++ LAK+ NL L
Sbjct: 208 IADLKRLQSVTL-ANNKIASLD----PVAELVAMQLLDVSGNELTSLDPLAKMSNLRTLY 262
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
++ N SL+ LA LT + LD +GN+ + +A L L TL++ D IT++
Sbjct: 263 VADNKLT--SLDPLAGLTKIWSLDAAGNELTSLDPVAKLGWLTTLEISDNKITSL 315
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL + +L +DL I + +A LK L+++ L++N SL+ +A L +Q+LD+S
Sbjct: 185 GLQHCKSLMLIDLADNKIEDLSPIADLKRLQSVTLANNKI--ASLDPVAELVAMQLLDVS 242
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
GN+ + LA + NL+TL + D +T++ + T
Sbjct: 243 GNELTSLDPLAKMSNLRTLYVADNKLTSLDPLAGLT 278
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
+A+L L+ + L I ++ +A+L ++ LD+S N SL+ LA ++NL+ L ++
Sbjct: 208 IADLKRLQSVTLANNKIASLDPVAELVAMQLLDVSGNELT--SLDPLAKMSNLRTLYVAD 265
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
N+ + LA L + +LD +T++ + +
Sbjct: 266 NKLTSLDPLAGLTKIWSLDAAGNELTSLDPVAKL 299
>gi|421084250|ref|ZP_15545113.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
gi|410433150|gb|EKP77498.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
Length = 429
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 68/120 (56%), Gaps = 13/120 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTIQ-GLAKLKNLE 57
+ LR LQ LDLS N SLT L + L NL++LDL + T+ + +LKNL+
Sbjct: 136 IGQLRNLQELDLSFN------SLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQ 189
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
LDL+SN L + + L NLQ LDL NQ LTTL + L NLKTL+L +TT+
Sbjct: 190 ELDLNSN-KLTTLPKEIRQLRNLQELDLHRNQ-LTTLPKEIGQLQNLKTLNLIVTQLTTL 247
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 28 LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+ L NL++LDL +TT+ + + +L+NL+ L L N L + + L NL+VLDL
Sbjct: 297 IGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQ-LTTLPKEIEQLQNLRVLDLD 355
Query: 87 GNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
NQ LTTL + L NL+ L L + +TT
Sbjct: 356 NNQ-LTTLPKEIGQLQNLQELCLDENQLTTF 385
>gi|421837684|ref|ZP_16271789.1| hypothetical protein CFSAN001627_19048, partial [Clostridium
botulinum CFSAN001627]
gi|409740112|gb|EKN40523.1| hypothetical protein CFSAN001627_19048, partial [Clostridium
botulinum CFSAN001627]
Length = 334
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLT+L+ LDL GI+ I L+KL+NL L L N L L NLTNL LDL G
Sbjct: 250 LENLTDLRVLDLSRTGISNISILSKLRNLNELYLGGNKI--TDLSYLENLTNLIKLDLVG 307
Query: 88 NQNLTTL-GLANLPNLKTLDL 107
N ++T++ L NL NL+ L L
Sbjct: 308 NNDITSIYALRNLINLRYLTL 328
>gi|297842171|ref|XP_002888967.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297334808|gb|EFH65226.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 966
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 65/127 (51%), Gaps = 20/127 (15%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT--------------- 45
L +L L++LDLS N +GS+ L++L LK LDL G +
Sbjct: 180 LRDLTNLELLDLSRNR--FNGSIPIQELSSLRKLKALDLSGNEFSGSMELQGKFSTNLQE 237
Query: 46 -TIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNL 102
I G+ +LKN + LDLS N + L +LT L+VLDLS NQ T+ L +LP+L
Sbjct: 238 WCIHGICELKNTQELDLSQNQLVGHFPSCLTSLTGLRVLDLSSNQLTGTVPSTLGSLPSL 297
Query: 103 KTLDLRD 109
+ L L D
Sbjct: 298 EYLSLFD 304
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 65/149 (43%), Gaps = 43/149 (28%)
Query: 1 LANLRYLQVLDLSANY----------------------NITSGSLTRLGLANLTNLKKLD 38
L LR L++LDLS+N N GS L +LTNL+ LD
Sbjct: 131 LRRLRKLEILDLSSNKFNNSIFHFLSAATSLTTLFLRSNNMVGSFPAKELRDLTNLELLD 190
Query: 39 LDG---CGITTIQGLAKLKNLEALDLSSNYYLHGSLE---------------GLANLTNL 80
L G IQ L+ L+ L+ALDLS N + GS+E G+ L N
Sbjct: 191 LSRNRFNGSIPIQELSSLRKLKALDLSGNEF-SGSMELQGKFSTNLQEWCIHGICELKNT 249
Query: 81 QVLDLSGNQNLTTLG--LANLPNLKTLDL 107
Q LDLS NQ + L +L L+ LDL
Sbjct: 250 QELDLSQNQLVGHFPSCLTSLTGLRVLDL 278
>gi|423526237|ref|ZP_17502688.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuA4-10]
gi|401164539|gb|EJQ71873.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuA4-10]
Length = 990
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 69/121 (57%), Gaps = 5/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L N++++ L + +IT G L +G LA L +++ L L I+ + L+++K ++ L
Sbjct: 257 LENIQFISKLRQLKSLSITYGELEDIGPLAELEHIEVLTLRNNKISDLSPLSQMKKIKML 316
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQG 117
DL+SNY ++ L +T+L+ L ++ NQ N G+ L N+K L L + G+T I+
Sbjct: 317 DLNSNYI--KDIKTLFTVTSLRTLAVANNQISNDNLAGIEQLKNVKNLSLSNNGLTNIEH 374
Query: 118 I 118
I
Sbjct: 375 I 375
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 26 LGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
+GL +TNL+ L L+G G+ I+ ++ LK L A+++S N + L++L NLQ L+L
Sbjct: 589 IGLEYMTNLENLTLEGVGLKNIEFISNLKQLNAMNVSHNKI--EDITPLSSLKNLQWLNL 646
Query: 86 SGN--QNLTTLG 95
+ N ++++ LG
Sbjct: 647 ADNRIKDVSVLG 658
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLE---GLANLTNLQVL 83
GL +TNL+ L L+ + IQ ++KL+ L++L ++ +G LE LA L +++VL
Sbjct: 240 GLEYMTNLENLTLEEVKLENIQFISKLRQLKSLSIT-----YGELEDIGPLAELEHIEVL 294
Query: 84 DLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
L N+ L+ + +K LDL I I+ + TS
Sbjct: 295 TLRNNKISDLSPLSQMKKIKMLDLNSNYIKDIKTLFTVTS 334
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 27/142 (19%)
Query: 1 LANLRYLQVLDLSANYN------ITSGSLTRLGLAN-------------LTNLKKLDLDG 41
L+ ++ +++LDL++NY T SL L +AN L N+K L L
Sbjct: 307 LSQMKKIKMLDLNSNYIKDIKTLFTVTSLRTLAVANNQISNDNLAGIEQLKNVKNLSLSN 366
Query: 42 CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNL---QVLDLSGNQNLTTLGLAN 98
G+T I+ + +K L LDL+ N LE +A L+ L Q L+L N L+
Sbjct: 367 NGLTNIEHITAMKKLVELDLAKN-----ELENIAPLSRLSTVQSLNLEENYISDITPLSQ 421
Query: 99 LPNLKTLDLRDCGITTIQGIQQ 120
L +L L L I ++ +Q+
Sbjct: 422 LTDLYDLKLGSNEIRDVRPVQE 443
>gi|434385223|ref|YP_007095834.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
PCC 6605]
gi|428016213|gb|AFY92307.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
PCC 6605]
Length = 362
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 71/122 (58%), Gaps = 9/122 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
LANL+ L L+ +T+ +T + L+ LTNLK++ L+ I+ IQ LA+L NL++L
Sbjct: 213 LANLKSLTTLE------VTNSKVTDIRALSGLTNLKRIVLNNNQISNIQPLARLTNLKSL 266
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
+L N+ +L LA LT+L ++LS NQ + +A L L L+L + IT I+ +
Sbjct: 267 NL--NFNRISNLTPLAGLTSLTGINLSDNQIVDIQPIAALTQLVGLNLNNNKITNIKPLA 324
Query: 120 QF 121
+
Sbjct: 325 KL 326
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 42/138 (30%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH----GS------------ 70
+A+LTNL+KL L IT + LA LK L+AL ++SN GS
Sbjct: 102 PIASLTNLRKLSLYSHNITDLTPLANLKQLDALVINSNKLTDLKPLGSLNNLNDLGLLGR 161
Query: 71 ----LEGLANLTNLQVL--------DLSGNQNLTTL--------------GLANLPNLKT 104
++ +A LTNL+ L D+ +NLT L LANL +L T
Sbjct: 162 NIVNIKPIAKLTNLKKLTLWYSSIQDIKAVKNLTQLTEVSFIDTKIADLSPLANLKSLTT 221
Query: 105 LDLRDCGITTIQGIQQFT 122
L++ + +T I+ + T
Sbjct: 222 LEVTNSKVTDIRALSGLT 239
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL-DLSSNYYLHGSLEGLANLTNLQVLDL 85
+A LTNLKKL L ++IQ + +KNL L ++S L LANL +L L++
Sbjct: 168 PIAKLTNLKKLTL---WYSSIQDIKAVKNLTQLTEVSFIDTKIADLSPLANLKSLTTLEV 224
Query: 86 SGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
+ ++ L+ L NLK + L + I+ IQ + + T
Sbjct: 225 TNSKVTDIRALSGLTNLKRIVLNNNQISNIQPLARLT 261
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+ NLT L ++ I + LA LK+L L+++++ + L+ LTNL+ + L+
Sbjct: 190 AVKNLTQLTEVSFIDTKIADLSPLANLKSLTTLEVTNSKV--TDIRALSGLTNLKRIVLN 247
Query: 87 GNQNLTTLGLANLPNLKTLDL---RDCGITTIQGIQQFT 122
NQ LA L NLK+L+L R +T + G+ T
Sbjct: 248 NNQISNIQPLARLTNLKSLNLNFNRISNLTPLAGLTSLT 286
>gi|387915510|gb|AFK11364.1| leucine-rich alpha-2-glycoprotein [Callorhinchus milii]
Length = 340
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 1 LANLRYLQVLDLSANY-NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGL--AKLKNLE 57
L +L L+VLDLSAN+ NI L NL L L G + T+ + A L+NL+
Sbjct: 100 LRDLGQLRVLDLSANFLNILPPKLFNFS----PNLNSLVLQGNRLQTVNPMWFAHLQNLQ 155
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGN--QNLTTLGLANLPNLKTLDL 107
LDLS+N NLTNL LDLS N + L + NLP LK L+L
Sbjct: 156 WLDLSANILKSLLPNSFQNLTNLVTLDLSNNKFEKLPSHLFNNLPKLKRLNL 207
>gi|221327740|gb|ACM17559.1| NBS-LRR disease resistance protein family-4 [Oryza brachyantha]
Length = 1449
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLK---NLEALDLSSNY-YLHGSLEGLANLTNLQVL 83
L NLT L+ L+L + + L+ LE L+LS+ Y ++ G E + NL L+ L
Sbjct: 700 LENLTELQFLNLSNTWFADVPEIYVLRAGTKLEYLNLSTEYTHIKGLTETMDNLIKLKYL 759
Query: 84 DLSGNQNLTTL--GLANLPNLKTLDLRDCGITTIQGIQQ 120
+LSG L L NLPNL LDL DCG I+G+ +
Sbjct: 760 NLSGWSQLEELPRSWRNLPNLMHLDLSDCG--KIKGVPE 796
>gi|423376128|ref|ZP_17353460.1| hypothetical protein IC5_05176, partial [Bacillus cereus AND1407]
gi|423572735|ref|ZP_17548882.1| hypothetical protein II7_05858, partial [Bacillus cereus MSX-A12]
gi|401089470|gb|EJP97638.1| hypothetical protein IC5_05176, partial [Bacillus cereus AND1407]
gi|401194499|gb|EJR01476.1| hypothetical protein II7_05858, partial [Bacillus cereus MSX-A12]
Length = 810
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L N++++ L + +IT G L +G LA L +++ L L I+ + L+++K ++ L
Sbjct: 257 LENIKFISNLRQLKSLSITYGELEDIGPLAELEHIESLSLRNNKISDLSPLSQMKKIKLL 316
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQG 117
DL+SNY ++ L +L+ L ++ NQ N G+ L N+K+L L + G+T I+
Sbjct: 317 DLNSNYI--KDIKPLFTAKSLRTLTVANNQISNANLAGIEQLKNVKSLSLSNNGLTNIEH 374
Query: 118 I 118
I
Sbjct: 375 I 375
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 21/140 (15%)
Query: 1 LANLRYLQVLDLSANYN------ITSGSLTRLGLAN-------------LTNLKKLDLDG 41
L+ ++ +++LDL++NY T+ SL L +AN L N+K L L
Sbjct: 307 LSQMKKIKLLDLNSNYIKDIKPLFTAKSLRTLTVANNQISNANLAGIEQLKNVKSLSLSN 366
Query: 42 CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
G+T I+ + +K L LDLS N ++E L+ ++ +Q L+L N L+ L
Sbjct: 367 NGLTNIEHITPMKKLVELDLSKNEL--ENIEPLSRMSTVQSLNLEENYISDITPLSQLTG 424
Query: 102 LKTLDLRDCGITTIQGIQQF 121
L L L I ++ +Q+
Sbjct: 425 LYDLKLASNEIRDVRPVQEL 444
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+ L L+G G+ I+ ++ LK L +++S N + L++L NLQ L+L
Sbjct: 597 GLEYMTNLENLTLEGVGLKNIEFISNLKQLNNVNVSHNQI--EDITPLSSLENLQWLNLE 654
Query: 87 GN--QNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
N +++T +G ++ NL +L+L I ++ + Q +
Sbjct: 655 DNHIKDVTVIG--SMLNLFSLNLAGNEIRDVRPLIQLGQW 692
>gi|375282625|ref|YP_005103062.1| internalin [Bacillus cereus NC7401]
gi|358351150|dbj|BAL16322.1| internalin, putative [Bacillus cereus NC7401]
Length = 929
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L N++++ L + +IT G L +G LA L +++ L L I+ + L+++K ++ L
Sbjct: 193 LENIKFISNLRQLKSLSITYGELEDIGPLAELEHIESLSLRNNKISDLSPLSQMKKIKLL 252
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQG 117
DL+SNY ++ L +L+ L ++ NQ N G+ L N+K+L L + G+T I+
Sbjct: 253 DLNSNYI--KDIKPLFTAKSLRTLTVANNQISNANLAGIEQLKNVKSLSLSNNGLTNIEH 310
Query: 118 I 118
I
Sbjct: 311 I 311
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 21/140 (15%)
Query: 1 LANLRYLQVLDLSANYN------ITSGSLTRLGLAN-------------LTNLKKLDLDG 41
L+ ++ +++LDL++NY T+ SL L +AN L N+K L L
Sbjct: 243 LSQMKKIKLLDLNSNYIKDIKPLFTAKSLRTLTVANNQISNANLAGIEQLKNVKSLSLSN 302
Query: 42 CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
G+T I+ + +K L LDLS N ++E L+ ++ +Q L+L N L+ L
Sbjct: 303 NGLTNIEHITPMKKLVELDLSKNEL--ENIEPLSRMSTVQSLNLEENYISDITPLSQLTG 360
Query: 102 LKTLDLRDCGITTIQGIQQF 121
L L L I ++ +Q+
Sbjct: 361 LYDLKLASNEIRDVRPVQEL 380
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+ L L+G G+ I+ ++ LK L +++S N + L++L NLQ L+L
Sbjct: 533 GLEYMTNLENLTLEGVGLKNIEFISNLKQLNNVNVSHNQI--EDITPLSSLENLQWLNLE 590
Query: 87 GN--QNLTTLG 95
N +++T +G
Sbjct: 591 DNHIKDVTVIG 601
>gi|187779624|ref|ZP_02996097.1| hypothetical protein CLOSPO_03220 [Clostridium sporogenes ATCC
15579]
gi|187773249|gb|EDU37051.1| leucine Rich Repeat protein [Clostridium sporogenes ATCC 15579]
Length = 1360
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 4 LRYLQVLD-LSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
++YL+ L+ L N SG L L L +LTNLK LDL I+ I L LK L L L
Sbjct: 876 IKYLKSLEYLYLNNTKLSGGL--LFLEDLTNLKALDLSDNNISDISILKGLKELNKLYLG 933
Query: 63 SNYYLH-GSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQQ 120
N + SLEG LT L LDL GN ++T++ L NL NLK+L L IT + IQ
Sbjct: 934 KNKIIDLSSLEG---LTKLVTLDLVGNDDITSIYALKNLVNLKSLTL---PITNPKKIQD 987
Query: 121 FTS 123
++
Sbjct: 988 YSP 990
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 23/121 (19%)
Query: 19 TSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY-----YLHG--SL 71
G LT + +++ +K+L+L I +++G+ LKN+ LD+S N+ YL G SL
Sbjct: 150 PKGPLTYM---DVSGIKELNLHNKNIKSLKGIEYLKNISNLDISDNHITDISYLRGLDSL 206
Query: 72 EGL-------------ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
E L +NL L+ L+++ N+ + L NL L+ LDLRD I I +
Sbjct: 207 EKLNLYNNDIKDISAVSNLPKLKYLNMAKNEVIDISYLKNLNYLEHLDLRDNKIENIDSL 266
Query: 119 Q 119
+
Sbjct: 267 E 267
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L L NL KL L I +I+ + LK+L+ LDLS+N + G + L L+ L LDLS
Sbjct: 634 SLKGLINLNKLVLHKNKIGSIKPIEYLKSLKELDLSNN--IIGDITALGGLSQLTRLDLS 691
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGIT 113
N ++ L+ L NL+ L L + I+
Sbjct: 692 KNGVVSIANLSGLENLQYLSLYENKIS 718
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 27/129 (20%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKN-LEALDLSSNY- 65
++ +L NY S + + L+++T KL+L G GI +QGL +K+ L LDLS+N
Sbjct: 576 EIRELIKNY---SEPIYKRQLSSIT---KLELSGKGIKDLQGLESMKDTLTYLDLSNNEI 629
Query: 66 ---------------YLH----GSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLD 106
LH GS++ + L +L+ LDLS N L L L LD
Sbjct: 630 SDISSLKGLINLNKLVLHKNKIGSIKPIEYLKSLKELDLSNNIIGDITALGGLSQLTRLD 689
Query: 107 LRDCGITTI 115
L G+ +I
Sbjct: 690 LSKNGVVSI 698
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ANL Y++ + ++ ++ + +L +LK+L++ C +T I+ ++ L L L
Sbjct: 434 VANLEYIKNMKHIEKLYVSDTKVSTI--PDLVSLKELNISNCNVTNIEFISSLSKLTYLC 491
Query: 61 LSSNYYLHG----SLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDC 110
LS N + G +++ + L NL+ L ++G + + L NLK LD+ C
Sbjct: 492 LS-NVQIKGHILDNIDNIKYLKNLEYLSIAGTDVVNIDVVKELINLKKLDITGC 544
>gi|217958141|ref|YP_002336685.1| internalin protein [Bacillus cereus AH187]
gi|217063091|gb|ACJ77341.1| internalin protein [Bacillus cereus AH187]
Length = 993
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L N++++ L + +IT G L +G LA L +++ L L I+ + L+++K ++ L
Sbjct: 257 LENIKFISNLRQLKSLSITYGELEDIGPLAELEHIESLSLRNNKISDLSPLSQMKKIKLL 316
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQG 117
DL+SNY ++ L +L+ L ++ NQ N G+ L N+K+L L + G+T I+
Sbjct: 317 DLNSNYI--KDIKPLFTAKSLRTLTVANNQISNANLAGIEQLKNVKSLSLSNNGLTNIEH 374
Query: 118 I 118
I
Sbjct: 375 I 375
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 21/140 (15%)
Query: 1 LANLRYLQVLDLSANYN------ITSGSLTRLGLAN-------------LTNLKKLDLDG 41
L+ ++ +++LDL++NY T+ SL L +AN L N+K L L
Sbjct: 307 LSQMKKIKLLDLNSNYIKDIKPLFTAKSLRTLTVANNQISNANLAGIEQLKNVKSLSLSN 366
Query: 42 CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
G+T I+ + +K L LDLS N ++E L+ ++ +Q L+L N L+ L
Sbjct: 367 NGLTNIEHITPMKKLVELDLSKNEL--ENIEPLSRMSTVQSLNLEENYISDITPLSQLTG 424
Query: 102 LKTLDLRDCGITTIQGIQQF 121
L L L I ++ +Q+
Sbjct: 425 LYDLKLASNEIRDVRPVQEL 444
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+ L L+G G+ I+ ++ LK L +++S N + L++L NLQ L+L
Sbjct: 597 GLEYMTNLENLTLEGVGLKNIEFISNLKQLNNVNVSHNQI--EDITPLSSLENLQWLNLE 654
Query: 87 GN--QNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
N +++T +G ++ NL +L+L I ++ + Q +
Sbjct: 655 DNHIKDVTVIG--SMLNLFSLNLAGNEIRDVRPLIQLGQW 692
>gi|240849085|ref|NP_001155729.1| protein phosphatases pp1 regulatory subunit-like [Acyrthosiphon
pisum]
gi|239792184|dbj|BAH72462.1| ACYPI007814 [Acyrthosiphon pisum]
Length = 329
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
L +L +LDL IT I+ L+ L NL+ LDLS N +EGL +L NL+ L LS N+
Sbjct: 89 LVSLNELDLYDNQITKIENLSSLINLKVLDLSFNRI--KEIEGLEHLINLEKLYLSSNRI 146
Query: 91 LTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
+ +L NL+ L+L D I TI+ I T
Sbjct: 147 TKITNVNHLLNLQMLELGDNKIKTIENIDCLT 178
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 57/119 (47%), Gaps = 24/119 (20%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L++L NLK LDL I I+GL L NLE L LSSN + + +L NLQ+L+L
Sbjct: 107 NLSSLINLKVLDLSFNRIKEIEGLEHLINLEKLYLSSNRI--TKITNVNHLLNLQMLELG 164
Query: 87 GN-----QNLTTL-----------------GLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N +N+ L L L NLK L L++ +T I+ + + TS
Sbjct: 165 DNKIKTIENIDCLTGLTELYFGKNKVNKIQNLDTLINLKILSLQNNSLTKIENLNKLTS 223
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
++ NL+ L L I I+ + L +L LDL N +E L++L NL+VLDLS
Sbjct: 63 NFEHMLNLRSLCLRWNHIKKIENIQMLVSLNELDLYDNQI--TKIENLSSLINLKVLDLS 120
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
N+ GL +L NL+ L L IT I +
Sbjct: 121 FNRIKEIEGLEHLINLEKLYLSSNRITKITNVNHL 155
>gi|116788284|gb|ABK24822.1| unknown [Picea sitchensis]
Length = 495
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGC-GITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
NL L+ +DL GC + ++ G L+NL+ ++LS+ + L + NL NLQ +DL
Sbjct: 378 FVNLRYLQHIDLQGCHNLQSLPDGFGDLRNLDHVNLSNCHDLEWLPDSFGNLRNLQYIDL 437
Query: 86 SGNQNLTTLG--LANLPNLKTLDLRDCGITTIQGIQ 119
SG NL L N LK LD+ C I+ I+
Sbjct: 438 SGCHNLERLPNYFRNFNKLKYLDVEGCSNLIIETIE 473
>gi|119471417|ref|XP_001258165.1| conserved leucine-rich repeat protein [Neosartorya fischeri NRRL 181]
gi|119406317|gb|EAW16268.1| conserved leucine-rich repeat protein [Neosartorya fischeri NRRL 181]
Length = 1821
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 19/112 (16%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L NL+YL ++++ L L G +L +L++L DG I I G+ L L L
Sbjct: 1373 LVNLQYL---------DVSNNELDSLDGFGSLIHLRELKADGNNIRNIDGILDLNGLLTL 1423
Query: 60 DLSSNYYLHGSLEGL----ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL 107
LS+N SL + LT LQ LDLS N+ ++ L +LP+L LDL
Sbjct: 1424 KLSNN-----SLAAIDFATGELTRLQELDLSHNRLVSVRHLDSLPSLSKLDL 1470
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 8/123 (6%)
Query: 3 NLRYLQ-VLDLSA--NYNITSGSLTRLGLAN--LTNLKKLDLDGCGITTIQGLAKLKNLE 57
N+R + +LDL+ +++ SL + A LT L++LDL + +++ L L +L
Sbjct: 1407 NIRNIDGILDLNGLLTLKLSNNSLAAIDFATGELTRLQELDLSHNRLVSVRHLDSLPSLS 1466
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQG 117
LDLSSN ++ A L L+ L L+ NQ L TL ++ +L L + ++T+ G
Sbjct: 1467 KLDLSSNQL--KQIDVSAPLRMLRSLKLANNQ-LQTLDVSMFSSLNLLYIDQNFLSTVFG 1523
Query: 118 IQQ 120
+++
Sbjct: 1524 LER 1526
>gi|426217395|ref|XP_004002939.1| PREDICTED: centrosomal protein of 97 kDa [Ovis aries]
Length = 858
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/102 (37%), Positives = 63/102 (61%), Gaps = 5/102 (4%)
Query: 17 NITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
++ + L R+ G+A LT L+ L+L I +++GL +L +LE L+L+ N ++E +
Sbjct: 64 SVANNRLVRMMGVAKLTQLRVLNLPHNSIGSVEGLKELVHLEWLNLAGNNL--KAMEQIN 121
Query: 76 NLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQ 116
T+LQ LDLS N N+ +G L+ L +LKTL L IT+++
Sbjct: 122 TCTSLQHLDLSDN-NIPQIGDLSKLVSLKTLLLHGNIITSLR 162
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L L +L + + + G+AKL L L+L N GS+EGL L +L+ L+L+G
Sbjct: 54 LEKCKQLVQLSVANNRLVRMMGVAKLTQLRVLNLPHNSI--GSVEGLKELVHLEWLNLAG 111
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N + +L+ LDL D I I + + S
Sbjct: 112 NNLKAMEQINTCTSLQHLDLSDNNIPQIGDLSKLVS 147
>gi|241042409|ref|XP_002407054.1| Mapmodulin, putative [Ixodes scapularis]
gi|215492088|gb|EEC01729.1| Mapmodulin, putative [Ixodes scapularis]
Length = 248
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
NL+ L L G+T+++G KL NL+ L+LS N + G L L L L+LSGN
Sbjct: 35 EEFVNLESLSLINVGLTSLKGFPKLPNLKKLELSDN-RISGGLNLLHGSPKLTHLNLSGN 93
Query: 89 --QNLTTL-GLANLPNLKTLDLRDCGITTIQ 116
+ L TL L NLK LDL +C +T+I+
Sbjct: 94 KIKGLETLEPLKEFKNLKNLDLFNCEVTSIE 124
>gi|72390651|ref|XP_845620.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359851|gb|AAX80279.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70802155|gb|AAZ12061.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261329027|emb|CBH12005.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 552
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Query: 17 NITS--GSLTRLG----LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGS 70
N+T+ S R+G L L NL KL LD ITTI L LK L+ LDLS N
Sbjct: 67 NVTTLLASYRRIGRIENLVGLGNLTKLALDNNLITTINNLGHLKKLQWLDLSFNQITE-- 124
Query: 71 LEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
+ GL LT L L L N+ G+ L L +L + + I ++ ++
Sbjct: 125 ISGLEELTELDTLSLFANKISVLQGMDTLTKLTSLSIGNNNIEALEDAARY 175
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
I I+ L L NL L L +N L ++ L +L LQ LDLS NQ GL L L
Sbjct: 78 IGRIENLVGLGNLTKLALDNN--LITTINNLGHLKKLQWLDLSFNQITEISGLEELTELD 135
Query: 104 TLDLRDCGITTIQGIQQFT 122
TL L I+ +QG+ T
Sbjct: 136 TLSLFANKISVLQGMDTLT 154
>gi|206974216|ref|ZP_03235133.1| putative internalin [Bacillus cereus H3081.97]
gi|206747456|gb|EDZ58846.1| putative internalin [Bacillus cereus H3081.97]
Length = 937
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L N++++ L + +IT G L +G LA L +++ L L I+ + L+++K ++ L
Sbjct: 257 LENIKFISNLRQLKSLSITYGELEDIGPLAELEHIESLSLRNNKISDLSPLSQMKKIKLL 316
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQG 117
DL+SNY ++ L +L+ L ++ NQ N G+ L N+K+L L + G+T I+
Sbjct: 317 DLNSNYI--KDIKPLFTAKSLRTLTVANNQISNANLAGIEQLKNVKSLSLSNNGLTNIEH 374
Query: 118 I 118
I
Sbjct: 375 I 375
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 21/140 (15%)
Query: 1 LANLRYLQVLDLSANYN------ITSGSLTRLGLAN-------------LTNLKKLDLDG 41
L+ ++ +++LDL++NY T+ SL L +AN L N+K L L
Sbjct: 307 LSQMKKIKLLDLNSNYIKDIKPLFTAKSLRTLTVANNQISNANLAGIEQLKNVKSLSLSN 366
Query: 42 CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
G+T I+ + +K L LDLS N ++E L+ ++ +Q L+L N L+ L
Sbjct: 367 NGLTNIEHITPMKKLVELDLSKNEL--ENIEPLSRMSTVQSLNLEENYISDITPLSQLTG 424
Query: 102 LKTLDLRDCGITTIQGIQQF 121
L L L I ++ +Q+
Sbjct: 425 LYDLKLASNEIRDVRPVQEL 444
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+ L L+G G+ I+ ++ LK L +++S N + L++L NLQ L+L
Sbjct: 597 GLEYMTNLENLTLEGVGLKNIEFISNLKQLNNVNVSHNQI--EDITPLSSLENLQWLNLE 654
Query: 87 GN--QNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
N +++T +G ++ NL +L+L I ++ + Q +
Sbjct: 655 DNHIKDVTVIG--SMLNLFSLNLAGNEIRDVRPLIQLGQW 692
>gi|423357027|ref|ZP_17334628.1| hypothetical protein IAU_05077, partial [Bacillus cereus IS075]
gi|401076070|gb|EJP84429.1| hypothetical protein IAU_05077, partial [Bacillus cereus IS075]
Length = 865
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L N++++ L + +IT G L +G LA L +++ L L I+ + L+++K ++ L
Sbjct: 257 LENIKFISNLRQLKSLSITYGELEDIGPLAELEHIESLSLRNNKISDLSPLSQMKKIKLL 316
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQG 117
DL+SNY ++ L +L+ L ++ NQ N G+ L N+K+L L + G+T I+
Sbjct: 317 DLNSNYI--KDIKPLFTAKSLRTLTVANNQISNANLAGIEQLKNVKSLSLSNNGLTNIEH 374
Query: 118 I 118
I
Sbjct: 375 I 375
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 21/140 (15%)
Query: 1 LANLRYLQVLDLSANYN------ITSGSLTRLGLAN-------------LTNLKKLDLDG 41
L+ ++ +++LDL++NY T+ SL L +AN L N+K L L
Sbjct: 307 LSQMKKIKLLDLNSNYIKDIKPLFTAKSLRTLTVANNQISNANLAGIEQLKNVKSLSLSN 366
Query: 42 CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
G+T I+ + +K L LDLS N ++E L+ ++ +Q L+L N L+ L
Sbjct: 367 NGLTNIEHITPMKKLVELDLSKNEL--ENIEPLSRMSTVQSLNLEENYISDITPLSQLTG 424
Query: 102 LKTLDLRDCGITTIQGIQQF 121
L L L I ++ +Q+
Sbjct: 425 LYDLKLASNEIRDVRPVQEL 444
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+ L L+G G+ I+ ++ LK L +++S N + L++L NLQ L+L
Sbjct: 597 GLEYMTNLENLTLEGVGLKNIEFISNLKQLNNVNVSHNQI--EDITPLSSLENLQWLNLE 654
Query: 87 GN--QNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
N +++T +G ++ NL +L+L I ++ + Q +
Sbjct: 655 DNHIKDVTVIG--SMLNLFSLNLAGNEIRDVRPLIQLGQW 692
>gi|222094304|ref|YP_002528363.1| internalin protein [Bacillus cereus Q1]
gi|221238361|gb|ACM11071.1| possible internalin protein [Bacillus cereus Q1]
Length = 1010
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L N++++ L + +IT G L +G LA L +++ L L I+ + L+++K ++ L
Sbjct: 246 LENIKFISNLRQLKSLSITYGELEDIGPLAELEHIESLSLRNNKISDLSPLSQMKKIKLL 305
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQG 117
DL+SNY ++ L +L+ L ++ NQ N G+ L N+K+L L + G+T I+
Sbjct: 306 DLNSNYI--KDIKPLFTAKSLRTLTVANNQISNANLAGIEQLKNVKSLSLSNNGLTNIEH 363
Query: 118 I 118
I
Sbjct: 364 I 364
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 21/140 (15%)
Query: 1 LANLRYLQVLDLSANYN------ITSGSLTRLGLAN-------------LTNLKKLDLDG 41
L+ ++ +++LDL++NY T+ SL L +AN L N+K L L
Sbjct: 296 LSQMKKIKLLDLNSNYIKDIKPLFTAKSLRTLTVANNQISNANLAGIEQLKNVKSLSLSN 355
Query: 42 CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
G+T I+ + +K L LDLS N ++E L+ ++ +Q L+L N L+ L
Sbjct: 356 NGLTNIEHITPMKKLVELDLSKNEL--ENIEPLSRMSTVQSLNLEENYISDITPLSQLTG 413
Query: 102 LKTLDLRDCGITTIQGIQQF 121
L L L I ++ +Q+
Sbjct: 414 LYDLKLASNEIRDVRPVQEL 433
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+ L L+G G+ I+ ++ LK L +++S N + L++L NLQ L+L
Sbjct: 586 GLEYMTNLENLTLEGVGLKNIEFISNLKQLNNVNVSHNQI--EDITPLSSLENLQWLNLE 643
Query: 87 GN--QNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
N +++T +G ++ NL +L+L I ++ + Q +
Sbjct: 644 DNHIKDVTVIG--SMLNLFSLNLAGNEIRDVRPLIQLGQW 681
>gi|224142195|ref|XP_002324444.1| predicted protein [Populus trichocarpa]
gi|222865878|gb|EEF03009.1| predicted protein [Populus trichocarpa]
Length = 336
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 25 RLGLANLTNLK---KLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQ 81
R+ + NL LK KL L +T+++G + LE L LS N +EGL+ L NL+
Sbjct: 195 RIKVVNLCGLKCIKKLSLQSNRVTSMKGFEECVALEELYLSHNGI--AKMEGLSTLVNLR 252
Query: 82 VLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
VLD+S N+ + + NL L+ L L D I +++G+ +
Sbjct: 253 VLDVSSNKLTSVNDIQNLTQLEDLWLNDNQIESLEGVSE 291
>gi|260812948|ref|XP_002601182.1| hypothetical protein BRAFLDRAFT_214464 [Branchiostoma floridae]
gi|229286473|gb|EEN57194.1| hypothetical protein BRAFLDRAFT_214464 [Branchiostoma floridae]
Length = 462
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 63/118 (53%), Gaps = 9/118 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG-LAKLKNLEAL 59
+ L L+ LDLS+N T + + LTN+K LDL C + T+ + +L LE L
Sbjct: 111 VWKLTQLEWLDLSSNPLQTLPA----EVGQLTNVKHLDLSQCQLRTLPSEVGRLTQLEWL 166
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
DLSSN L + +LTNL+ LDL N L TL + + N+K LDL C + T+
Sbjct: 167 DLSSN-PLQTLPAEVGHLTNLEKLDLCSN-PLQTLPAEVGHCTNVKHLDLSHCQLRTL 222
Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQ-GLAKLKNLEAL 59
+ L L+ LDLS+N T + + LTN+K LDL C + T+ + KL LE L
Sbjct: 65 VGRLTQLEWLDLSSNPLQTLPA----EVGQLTNVKHLDLSHCQLHTLPLEVWKLTQLEWL 120
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTIQG 117
DLSSN L + LTN++ LDLS Q L TL + L L+ LDL + T+
Sbjct: 121 DLSSN-PLQTLPAEVGQLTNVKHLDLSQCQ-LRTLPSEVGRLTQLEWLDLSSNPLQTLPA 178
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 60/139 (43%), Gaps = 28/139 (20%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG-LAKLKNLEAL 59
+ L L+ L LS+N T + + LTN+K+L+L C + T+ + KL LE L
Sbjct: 318 VWKLTQLEWLSLSSNPLQTLPA----EVGQLTNVKQLNLSDCQLHTLPPEVGKLTQLERL 373
Query: 60 DLSSNY----------------------YLHGSLEGLANLTNLQVLDLSGNQ-NLTTLGL 96
DLSSN LH + LT L+ LDL N + +
Sbjct: 374 DLSSNPLQTLPAEVGQLTNVKHLDLSQCLLHTLPPEVGRLTQLEWLDLRSNPLHALPAEV 433
Query: 97 ANLPNLKTLDLRDCGITTI 115
L N+K LDL C + T+
Sbjct: 434 GQLTNVKHLDLSHCQLHTL 452
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 61/140 (43%), Gaps = 30/140 (21%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQ-GLAKLKNLEAL 59
+ L L+ LDL +N T + + + TN+K LDL C + T+ + KL LE L
Sbjct: 272 VGRLTQLEKLDLCSNPLQTLPA----EVGHCTNVKHLDLSHCQLRTLPFEVWKLTQLEWL 327
Query: 60 DLSSNY----------------------YLHGSLEGLANLTNLQVLDLSGNQNLTTLG-- 95
LSSN LH + LT L+ LDLS N L TL
Sbjct: 328 SLSSNPLQTLPAEVGQLTNVKQLNLSDCQLHTLPPEVGKLTQLERLDLSSN-PLQTLPAE 386
Query: 96 LANLPNLKTLDLRDCGITTI 115
+ L N+K LDL C + T+
Sbjct: 387 VGQLTNVKHLDLSQCLLHTL 406
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 48/108 (44%), Gaps = 26/108 (24%)
Query: 33 NLKKLDLDGCGITTIQG-LAKLKNLEALDLSSNYYL------------------HGSLEG 73
N+K LDL C + T+ + KL LE LDLSSN H L
Sbjct: 1 NIKHLDLSDCQLHTLPPEVGKLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLNLSHCQLRT 60
Query: 74 LA----NLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
L LT L+ LDLS N L TL + L N+K LDL C + T+
Sbjct: 61 LPPEVGRLTQLEWLDLSSN-PLQTLPAEVGQLTNVKHLDLSHCQLHTL 107
>gi|297745137|emb|CBI38976.3| unnamed protein product [Vitis vinifera]
Length = 741
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 70/114 (61%), Gaps = 11/114 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI---QGLAKLKNLE 57
A+L L++LDLS YN +G L + +++LK L L G+ + QGL +L L+
Sbjct: 30 FASLNNLEILDLS--YNFLNGILPS-SIRLMSSLKFLSLARNGLNSSLQDQGLCQLNKLQ 86
Query: 58 ALDLSSNYYLHGSLEG-LANLTNLQVLDLSGN---QNLTTLGLANLPNLKTLDL 107
LDL+SN++ HG L L NLT+L++LDLS N N ++ LANL +L+ +DL
Sbjct: 87 ELDLNSNFF-HGILPPCLNNLTSLRLLDLSSNLFSGNASSSLLANLTSLEYIDL 139
>gi|182624852|ref|ZP_02952631.1| internalin like protein [Clostridium perfringens D str. JGS1721]
gi|177909858|gb|EDT72268.1| internalin like protein [Clostridium perfringens D str. JGS1721]
Length = 965
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH--GSLEGLANLTNLQVLD 84
GL N T++ +L L G I+ I LA L NLE LDL + Y + + LANLTNL+ L
Sbjct: 404 GLENCTSINELILHGNQISDISPLANLINLENLDLGYDKYGNQISDISPLANLTNLKHLY 463
Query: 85 LSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL NL+TL L++ I+ + I T
Sbjct: 464 AKHNQISDISPLANLTNLQTLWLQNNRISDVSPIANLT 501
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 42/82 (51%), Gaps = 12/82 (14%)
Query: 28 LANLTNLKKLDLD----GCGITTIQGLAKLKNLEALDLSSNYYLH---GSLEGLANLTNL 80
LANL NL+ LDL G I+ I LA L NL+ L Y H + LANLTNL
Sbjct: 427 LANLINLENLDLGYDKYGNQISDISPLANLTNLKHL-----YAKHNQISDISPLANLTNL 481
Query: 81 QVLDLSGNQNLTTLGLANLPNL 102
Q L L N+ +ANL NL
Sbjct: 482 QTLWLQNNRISDVSPIANLTNL 503
>gi|428212495|ref|YP_007085639.1| hypothetical protein Oscil6304_2053 [Oscillatoria acuminata PCC
6304]
gi|428000876|gb|AFY81719.1| leucine-rich repeat (LRR) protein [Oscillatoria acuminata PCC 6304]
Length = 455
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Query: 1 LANLRYLQVLDLSAN--YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
LA L L+ LDLS N +I S LANL NLK L + I + L L NLE
Sbjct: 116 LAGLTNLEWLDLSYNKIEDIAS-------LANLNNLKFLAIRDNQIEDVAPLTNLTNLEV 168
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L L N G + A+LT L L LSGNQ LANL NL++L L + I + +
Sbjct: 169 LWLDENKI--GEVASFASLTQLTQLHLSGNQIEDVAPLANLTNLESLWLNENKIKDVASL 226
Query: 119 QQFT 122
T
Sbjct: 227 VSMT 230
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
L+ + +L + G I I LA L NLE L+LS N + LA LTNL+ LDLS N+
Sbjct: 75 LSKMTELGIRGDEIKDIAPLAGLTNLEWLELSYNKI--EDIAPLAGLTNLEWLDLSYNKI 132
Query: 91 LTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
LANL NLK L +RD I + + T
Sbjct: 133 EDIASLANLNNLKFLAIRDNQIEDVAPLTNLT 164
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
LA LTNL+ L+L I I LA L NLE LDLS N + LANL NL+ L +
Sbjct: 93 PLAGLTNLEWLELSYNKIEDIAPLAGLTNLEWLDLSYNKI--EDIASLANLNNLKFLAIR 150
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L NL NL+ L L + I + T
Sbjct: 151 DNQIEDVAPLTNLTNLEVLWLDENKIGEVASFASLT 186
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 64/140 (45%), Gaps = 21/140 (15%)
Query: 1 LANLRYLQVLDLSANY--NITS-GSLTRL--------------GLANLTNLKKLDLDGCG 43
L NL L+VL L N + S SLT+L LANLTNL+ L L+
Sbjct: 160 LTNLTNLEVLWLDENKIGEVASFASLTQLTQLHLSGNQIEDVAPLANLTNLESLWLNENK 219
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLH-GSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNL 102
I + L + L L LSSN L+GL + LQ L+ NQ + LA+L NL
Sbjct: 220 IKDVASLVSMTKLTQLYLSSNEIEDLAPLKGLPEMAELQ---LNNNQIVNVAPLASLTNL 276
Query: 103 KTLDLRDCGITTIQGIQQFT 122
TL+L + I I + T
Sbjct: 277 TTLELNENQIKDIAPLASLT 296
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
LA+LT L L L I I LA L LE L L N + LA+LTNL L L
Sbjct: 291 PLASLTQLGFLQLTKNQIVNISPLATLTKLETLQLLYNEI--KDVAPLASLTNLTFLTLG 348
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LA+L L +LDL + I I + T
Sbjct: 349 ENQIKDVAPLASLTELTSLDLSNNEIKDIDPLANLT 384
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 61/139 (43%), Gaps = 19/139 (13%)
Query: 1 LANLRYLQVLDLSANY--NITS-GSLTRLG--------------LANLTNLKKLDLDGCG 43
LA+L L L+L+ N +I SLT+LG LA LT L+ L L
Sbjct: 270 LASLTNLTTLELNENQIKDIAPLASLTQLGFLQLTKNQIVNISPLATLTKLETLQLLYNE 329
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
I + LA L NL L L N + LA+LT L LDLS N+ LANL L
Sbjct: 330 IKDVAPLASLTNLTFLTLGENQI--KDVAPLASLTELTSLDLSNNEIKDIDPLANLTQLT 387
Query: 104 TLDLRDCGITTIQGIQQFT 122
L L D I + + T
Sbjct: 388 FLHLSDNQIKDVAPLASLT 406
>gi|423577603|ref|ZP_17553722.1| hypothetical protein II9_04824, partial [Bacillus cereus MSX-D12]
gi|401204307|gb|EJR11124.1| hypothetical protein II9_04824, partial [Bacillus cereus MSX-D12]
Length = 815
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L N++++ L + +IT G L +G LA L +++ L L I+ + L+++K ++ L
Sbjct: 257 LENIKFISNLRQLKSLSITYGELEDIGPLAELEHIESLSLRNNKISDLSPLSQMKKIKLL 316
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQG 117
DL+SNY ++ L +L+ L ++ NQ N G+ L N+K+L L + G+T I+
Sbjct: 317 DLNSNYI--KDIKPLFTAKSLRTLTVANNQISNANLAGIEQLKNVKSLSLSNNGLTNIEH 374
Query: 118 I 118
I
Sbjct: 375 I 375
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 21/140 (15%)
Query: 1 LANLRYLQVLDLSANYN------ITSGSLTRLGLAN-------------LTNLKKLDLDG 41
L+ ++ +++LDL++NY T+ SL L +AN L N+K L L
Sbjct: 307 LSQMKKIKLLDLNSNYIKDIKPLFTAKSLRTLTVANNQISNANLAGIEQLKNVKSLSLSN 366
Query: 42 CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
G+T I+ + +K L LDLS N ++E L+ ++ +Q L+L N L+ L
Sbjct: 367 NGLTNIEHITPMKKLVELDLSKNEL--ENIEPLSRMSTVQSLNLEENYISDITPLSQLTG 424
Query: 102 LKTLDLRDCGITTIQGIQQF 121
L L L I ++ +Q+
Sbjct: 425 LYDLKLALNEIRDVRPVQEL 444
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLE---GLANLTNLQVL 83
GL + NL+KL L+G G+ I+ + +K L L++S H +E L++L NLQ L
Sbjct: 597 GLEYMMNLEKLTLEGVGLKNIEFILNMKQLNNLNVS-----HNQIEDTTPLSSLKNLQWL 651
Query: 84 DLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
+L+ N+ L ++ +L +L L + I ++ + Q +
Sbjct: 652 NLTDNRIKDVSVLGSMLDLLSLKLAENEIRDVRPLIQLGQW 692
>gi|423663695|ref|ZP_17638864.1| hypothetical protein IKM_04092 [Bacillus cereus VDM022]
gi|401295595|gb|EJS01219.1| hypothetical protein IKM_04092 [Bacillus cereus VDM022]
Length = 760
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ NL+ L V AN IT S ANL L L L G + + L K++NLE+LD
Sbjct: 241 MPNLKSLTV----ANAKITDPSF----FANLKQLNHLALRGNEFSDVTPLVKMENLESLD 292
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
LS+N ++ L + N++ L LSGNQ LA + L L+L + IT +
Sbjct: 293 LSNNKIT--NVAPLIEMKNVKSLYLSGNQIEDVTALAKMEQLDYLNLANNKITDV 345
>gi|242006322|ref|XP_002424000.1| leucine-rich transmembrane protein, putative [Pediculus humanus
corporis]
gi|212507292|gb|EEB11262.1| leucine-rich transmembrane protein, putative [Pediculus humanus
corporis]
Length = 1143
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 28 LANLTNLKKLDLDGCGITTIQ-GLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L NL NL KLDL G I ++ G+ + E LDLS NY+ L LT L+ L+LS
Sbjct: 57 LQNLKNLFKLDLTGNQIRELEEGILR----ETLDLSQNYFTEYPYVTLKELTKLKNLNLS 112
Query: 87 GN--QNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
N + LT L L NL+TLDL I +IQ F
Sbjct: 113 SNLIKKLTNTHLNTLINLETLDLSRNSINSIQPDDAF 149
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGN---QNLTTLGLANLPNLKTLDLRDCGITTI 115
LDLS N + E L NL+ ++S N ++L + N P L TLD+ +CG+T I
Sbjct: 279 LDLSENMFPDLPWEQFTQLVNLKHFNMSNNFYLESLESTFFNNFPMLATLDMSNCGVTNI 338
Query: 116 QG 117
Sbjct: 339 HA 340
>gi|423601235|ref|ZP_17577235.1| hypothetical protein III_04037 [Bacillus cereus VD078]
gi|401230662|gb|EJR37168.1| hypothetical protein III_04037 [Bacillus cereus VD078]
Length = 760
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ NL+ L V AN IT S ANL L L L G + + L K++NLE+LD
Sbjct: 241 MPNLKSLTV----ANAKITDPSF----FANLKQLNHLALRGNEFSDVTPLVKMENLESLD 292
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
LS+N ++ L + N++ L LSGNQ LA + L L+L + IT +
Sbjct: 293 LSNNKIT--NVAPLIEMKNVKSLYLSGNQIEDVTALAKMEQLDYLNLANNKITDV 345
>gi|330801563|ref|XP_003288795.1| hypothetical protein DICPUDRAFT_153083 [Dictyostelium purpureum]
gi|325081131|gb|EGC34658.1| hypothetical protein DICPUDRAFT_153083 [Dictyostelium purpureum]
Length = 448
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L +LT L+ L L+GC + +I+ L KNL L+L+ N + G L L+ L+ L LSG
Sbjct: 34 LKDLTELEILSLNGCSLQSIETLPIFKNLRKLELNDN-RISGGLSVLSGFDKLESLSLSG 92
Query: 88 NQ--NLTTLGLAN-LPNLKTLDLRDCGIT 113
NQ L L N LP+L+ LDL C +T
Sbjct: 93 NQIKTLEELQPLNCLPSLQFLDLFACPVT 121
>gi|406664044|ref|ZP_11072034.1| Internalin-A precursor [Cecembia lonarensis LW9]
gi|405551597|gb|EKB47323.1| Internalin-A precursor [Cecembia lonarensis LW9]
Length = 818
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 12/120 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+NLR L+V+D+ LT + + +L+ L++L + + I+ +A L L+ L
Sbjct: 675 FSNLRKLEVIDVP---------LTDISAVGDLSLLEELKISQAPVNEIEAIALLSRLKVL 725
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
DLS Y L ++ L+NL+VL++SG GL L NLK LD+ + +++ IQ
Sbjct: 726 DLS--YTGIDDLRTISGLSNLEVLNVSGTNIRVLRGLETLRNLKDLDIASTNVRSLRPIQ 783
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDL 61
++++++ D + NI+ +T +G L NL L L+ G I + L L L+L
Sbjct: 284 DIQFIKFSDRLTHLNISGTRVTDIGELGNLNQLHTLEAVGTPIESFGVLNSFGALRHLNL 343
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRD 109
+ + ++E + L NLQ LD+S N + L+ L NL+ + L +
Sbjct: 344 RQSGF--NNVENINELENLQFLDISSNFLINFEMLSELKNLEQVVLME 389
>gi|428298451|ref|YP_007136757.1| small GTP-binding protein [Calothrix sp. PCC 6303]
gi|428234995|gb|AFZ00785.1| small GTP-binding protein [Calothrix sp. PCC 6303]
Length = 1408
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 28 LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+A L+NL++L + IT I + +AKL NL L +SSN E +ANL+NL+ L +S
Sbjct: 145 IAKLSNLRELHVSSNKITEIPEAIAKLSNLRELHVSSNQITEIP-EAIANLSNLRELHVS 203
Query: 87 GNQNLTTL--GLANLPNLKTLDLRDCGITTIQGI 118
NQ +T + +A L NL+ L + IT I +
Sbjct: 204 SNQ-ITEIPEAIAKLINLRELQVSSNKITEIPEV 236
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 67/128 (52%), Gaps = 13/128 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITTI-QGLAKLKNLE 57
LA L L LDL+ N +T + LA LTNL +L L IT I + LAKL NL
Sbjct: 513 LAKLSNLTQLDLNRN------KITEIPEALAKLTNLTQLYLRNNRITEIPEALAKLTNLT 566
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
LDL +NY + E + LTNL L+L+ +Q +T + +A L NL L+L I I
Sbjct: 567 QLDLGTNYNISEIPEAITKLTNLTQLNLTSSQ-ITEIPEVIAKLTNLTQLNLTSNQIAEI 625
Query: 116 -QGIQQFT 122
+ I + T
Sbjct: 626 PEAIAKLT 633
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 70/146 (47%), Gaps = 26/146 (17%)
Query: 1 LANLRYLQVLDLSANYNI------------------TSGSLTRLG--LANLTNLKKLDLD 40
LA L L LDL NYNI TS +T + +A LTNL +L+L
Sbjct: 559 LAKLTNLTQLDLGTNYNISEIPEAITKLTNLTQLNLTSSQITEIPEVIAKLTNLTQLNLT 618
Query: 41 GCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLA 97
I I + +AKL NL L L+SN E +A LTNL L+L+ NQ +T + +A
Sbjct: 619 SNQIAEIPEAIAKLTNLTQLILTSNQITEIP-EAIAKLTNLTQLNLTSNQ-ITKIPEAIA 676
Query: 98 NLPNLKTLDLRDCGITTI-QGIQQFT 122
L NL L L IT I + I + T
Sbjct: 677 KLTNLTQLILSYNQITEIPEAIAKLT 702
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 68/142 (47%), Gaps = 37/142 (26%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITTI-QGLAKLKNLE 57
L+NLR L V +S +T + +ANL+NL++L + IT I + +AKL NL
Sbjct: 171 LSNLRELHV---------SSNQITEIPEAIANLSNLRELHVSSNQITEIPEAIAKLINLR 221
Query: 58 ALDLSSNY-----------------YLHGS-----LEGLANLTNLQVLDLSGNQNLTTL- 94
L +SSN YL + E +A LTNL LDLS NQ +T +
Sbjct: 222 ELQVSSNKITEIPEVIAKLTNLRKLYLRNNQITEIPEVIAKLTNLTQLDLSYNQ-ITKIS 280
Query: 95 -GLANLPNLKTLDLRDCGITTI 115
LA L NL + L + IT I
Sbjct: 281 EALAKLINLTQIILHNNKITEI 302
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 63/120 (52%), Gaps = 13/120 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITTI-QGLAKLKNLE 57
+A L L LDLS N +T++ LA LTNL +L L I+ I + LAKL NL
Sbjct: 352 IAKLTNLTQLDLSYN------QITKIPEALAKLTNLTQLILYSNRISEIPEALAKLINLT 405
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGITTI 115
+ LS N + E LA LTNL LDLS NQ +T + LA L NL + L IT I
Sbjct: 406 QIILSYNR-ISEIPEALAKLTNLTQLDLSYNQ-ITKIPEALAKLINLTQIILHSNKITEI 463
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
LA L NL +LDL IT I + LAKL NL L L SN E +A LTNL LDL
Sbjct: 305 ALAKLINLTQLDLSYNQITKIPEALAKLTNLTQLILYSNQITEIP-EVIAKLTNLTQLDL 363
Query: 86 SGNQNLTTL--GLANLPNLKTLDLRDCGITTI 115
S NQ +T + LA L NL L L I+ I
Sbjct: 364 SYNQ-ITKIPEALAKLTNLTQLILYSNRISEI 394
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
LA LTNL +L+L I I + LAKL NL LDL+ N E LA LTNL L L
Sbjct: 489 ALAKLTNLTQLNLSDNQIIKIPKALAKLSNLTQLDLNRNKITEIP-EALAKLTNLTQLYL 547
Query: 86 SGNQNLTTL--GLANLPNLKTLDL 107
N+ +T + LA L NL LDL
Sbjct: 548 RNNR-ITEIPEALAKLTNLTQLDL 570
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 18 ITSGSLTRL--GLANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGL 74
+TS +T + +A LTNL +L+L IT I + +AKL NL L LS N E +
Sbjct: 640 LTSNQITEIPEAIAKLTNLTQLNLTSNQITKIPEAIAKLTNLTQLILSYNQITEIP-EAI 698
Query: 75 ANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGITTI 115
A LTNL L L+ NQ +T + + L NL LDL I+ I
Sbjct: 699 AKLTNLTQLILTSNQ-ITEIPDAITKLTNLTQLDLSYNRISEI 740
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 11/96 (11%)
Query: 17 NITSGSLTRL--GLANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEG 73
N+TS +T++ +A LTNL +L L IT I + +AKL NL L L+SN +
Sbjct: 662 NLTSNQITKIPEAIAKLTNLTQLILSYNQITEIPEAIAKLTNLTQLILTSNQITEIP-DA 720
Query: 74 LANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRD 109
+ LTNL LDLS N+ ++ +P L+ LD +D
Sbjct: 721 ITKLTNLTQLDLSYNR------ISEIP-LEILDSKD 749
>gi|296212488|ref|XP_002807179.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and IQ
domain-containing protein 1 [Callithrix jacchus]
Length = 1680
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA TNL+ L L CG+T++ L+ KNL+ +D N+ E NL NL VL L+
Sbjct: 769 LAECTNLQFLSLRRCGLTSLHSLSNCKNLKYIDAQENHIEAIDCE---NLENLCVLLLNK 825
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTI 115
NQ + GL N++ L+L IT I
Sbjct: 826 NQLTSLHGLDGCTNIQCLELSHNRITRI 853
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L +L NL++L LD + + +GL + LD S N+ +EG+ N LQ+L L G
Sbjct: 921 LESLKNLQQLILDHNQLISTKGLCDTPTIVYLDCSYNHLT--DVEGIENCGLLQILKLQG 978
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
N L NL L+ L L D I+T++ F+SY
Sbjct: 979 NYLSELPSLENLVLLRELYLDDNNISTVEA---FSSY 1012
>gi|442749617|gb|JAA66968.1| Putative leucine-rich acidic nuclear protein [Ixodes ricinus]
Length = 260
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
NL+ L L G+T+++G KL NL+ L+LS N + G L L L L+LSGN
Sbjct: 35 EEFVNLESLSLINVGLTSLKGFPKLPNLKKLELSDN-RISGGLNLLHGSPKLTHLNLSGN 93
Query: 89 --QNLTTL-GLANLPNLKTLDLRDCGITTIQ 116
+ L TL L NLK LDL +C +T+I+
Sbjct: 94 KIKGLETLEPLKEFKNLKNLDLFNCEVTSIE 124
>gi|427781505|gb|JAA56204.1| Putative microtubule binding protein [Rhipicephalus pulchellus]
Length = 245
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
NL+ L L G+T+++G KL NL+ L+LS N + G L L L L+LSGN
Sbjct: 35 EEFVNLETLSLINVGLTSLKGFPKLPNLKKLELSDN-RISGGLNLLHGSPKLTHLNLSGN 93
Query: 89 --QNLTTL-GLANLPNLKTLDLRDCGITTIQ 116
+ L TL L NLK LDL +C +T+I+
Sbjct: 94 KIKGLETLDPLKEFKNLKNLDLFNCEVTSIE 124
>gi|45656720|ref|YP_000806.1| hypothetical protein LIC10829 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|421084297|ref|ZP_15545160.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
gi|421102948|ref|ZP_15563550.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45599956|gb|AAS69443.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|410367263|gb|EKP22649.1| leucine rich repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410433197|gb|EKP77545.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
Length = 402
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 65/110 (59%), Gaps = 8/110 (7%)
Query: 18 ITSGSLTRLG--LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGL 74
+ S LT L + L NL+ L+L +TT+ + + +L+NL++LDL SN E +
Sbjct: 193 LVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKE-I 251
Query: 75 ANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGITTI-QGIQQF 121
L NLQVLDL NQ LTTL G+ L NL+TLDL +TT+ Q I+Q
Sbjct: 252 GQLKNLQVLDLGSNQ-LTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQL 300
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 62/108 (57%), Gaps = 9/108 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ L+ LDL +N ++ + L NL+ LDL +TT+ +G+ +LKNL+ L
Sbjct: 228 IEQLQNLKSLDLRSN----QLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTL 283
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTL 105
DL SN L + + L NLQ+LDLS NQ L TL + L NL+TL
Sbjct: 284 DLDSN-QLTTLPQEIKQLKNLQLLDLSYNQ-LKTLPKEIEQLKNLQTL 329
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 30/140 (21%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ L+ L+LS N T + L L+ L LD +TT+ Q + +L+NL++L
Sbjct: 90 IGQLKNLKSLNLSYNQIKTIPK----EIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 145
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGN------------QNLTTLGLAN--------- 98
DLS+N L + + L NLQ LDLS N QNL L L +
Sbjct: 146 DLSTN-RLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTILPNE 204
Query: 99 ---LPNLKTLDLRDCGITTI 115
L NL+TL+LR+ +TT+
Sbjct: 205 IGQLKNLQTLNLRNNRLTTL 224
>gi|44888781|gb|AAS48162.1| LRR protein WM1.2 [Aegilops tauschii]
Length = 1060
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQGLAK------L 53
L N+ LQVLD+S N+N + +L L NL +L+ +DLDG I+ I+ L +
Sbjct: 297 LGNMTSLQVLDVSYNWNPDMMMIGKL-LKNLCSLEIIDLDGNEISGEIEVLMESWPQCTW 355
Query: 54 KNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDL 107
KNL+ LDLSSN + L + T+L+ L LSGN L NL L +LDL
Sbjct: 356 KNLQELDLSSNTFTGTLPNFLGDFTSLRTLSLSGNSLAGPIPPQLGNLTCLTSLDL 411
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQG-LAKLKNLEA 58
L NLRYL L+L N +GS+ L L NLT L +DL +T +I + KL L +
Sbjct: 424 LGNLRYLTALELQGNE--ITGSIP-LQLGNLTCLTSIDLGDNHLTGSIPAEVGKLTYLTS 480
Query: 59 LDLSSNYYLHGSLE-GLANLTNLQVLDLSGNQN---LTTLGLANLPNLKTLDL 107
LDLSSN +L+GS+ + +L NL LDL N +T ANL +LK +DL
Sbjct: 481 LDLSSN-HLNGSVPTEMGSLINLISLDLRNNSFTGVITGEHFANLTSLKQIDL 532
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDG---CGITTIQGLAKLKNLEALDLSS 63
LQ LDLS+N +G+L L + T+L+ L L G G Q L L L +LDLSS
Sbjct: 358 LQELDLSSN--TFTGTLPNF-LGDFTSLRTLSLSGNSLAGPIPPQ-LGNLTCLTSLDLSS 413
Query: 64 NYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGIT 113
N++ + L NL L L+L GN+ L L NL L ++DL D +T
Sbjct: 414 NHFTGSIRDELGNLRYLTALELQGNEITGSIPLQLGNLTCLTSIDLGDNHLT 465
>gi|21655195|gb|AAM28912.1| NBS/LRR [Pinus taeda]
Length = 363
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 14/116 (12%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITT--IQGLAKLKNL 56
LANL+++ + D S L +L NL NL+ +++ GC G L NL
Sbjct: 173 LANLQHIDMSDCS--------ELKKLPDDFGNLANLQHINMSGCWRLEQLTNGFGNLANL 224
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDC 110
+ +D+S + L +G NL NLQ + +S L L G NL NL+ +D+ C
Sbjct: 225 QHIDMSDCWGLKQLPDGFGNLANLQHIHMSHCSGLKQLPDGFGNLANLQHIDMSKC 280
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT--IQGLAKLKNLEA 58
NL LQ + +S + + G NL NL+ + + C G L NL+
Sbjct: 122 FGNLANLQHIHMSRCWRLKQ---LPDGFGNLANLQHIHMSHCWALKQLPDGFGNLANLQH 178
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDC 110
+D+S L + NL NLQ +++SG L L G NL NL+ +D+ DC
Sbjct: 179 IDMSDCSELKKLPDDFGNLANLQHINMSGCWRLEQLTNGFGNLANLQHIDMSDC 232
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 7/114 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQ-GLAKLKNLEA 58
NL LQ +D+S + + G NL NL+ + + C G+ + G L NL+
Sbjct: 218 FGNLANLQHIDMSDCWGLKQ---LPDGFGNLANLQHIHMSHCSGLKQLPDGFGNLANLQH 274
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDC 110
+D+S L +G NL NLQ +++S L L G NL NL+ +++ C
Sbjct: 275 IDMSKCRGLEQLPDGFGNLANLQHINMSHCPGLKQLPDGFGNLANLQHINMSHC 328
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 27 GLANLTNLKKLDLDGCGITT--IQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLD 84
G NL NL+ + + C G L NL+ + +S + L +G NL NLQ +D
Sbjct: 121 GFGNLANLQHIHMSRCWRLKQLPDGFGNLANLQHIHMSHCWALKQLPDGFGNLANLQHID 180
Query: 85 LSGNQNLTTLG--LANLPNLKTLDLRDC 110
+S L L NL NL+ +++ C
Sbjct: 181 MSDCSELKKLPDDFGNLANLQHINMSGC 208
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGC-GITTIQ-GLAKLKNL 56
NL LQ +D+S L +L G NL NL+ +++ C G+ + G L NL
Sbjct: 266 FGNLANLQHIDMS-----KCRGLEQLPDGFGNLANLQHINMSHCPGLKQLPDGFGNLANL 320
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
+ +++S L +G NL NLQ +D+SG
Sbjct: 321 QHINMSHCPGLKQLPDGFGNLANLQHIDMSG 351
>gi|46447590|ref|YP_008955.1| hypothetical protein pc1956 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401231|emb|CAF24680.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 659
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLK---NLE 57
L+ L LQ LDLS N+T L L L L+ L+L C T GL LK L+
Sbjct: 346 LSPLTALQHLDLSDCENLTDAGLVHL--KPLVALQHLNLSCCENLTDAGLVHLKLLVALQ 403
Query: 58 ALDLS-SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLP---NLKTLDLRDCGIT 113
LDLS N L L LT LQ LDLS NLT GL +L L+ LDLR C
Sbjct: 404 HLDLSDCNNLTDAGLAHLTPLTALQYLDLSYCNNLTDAGLVHLKFLTALQHLDLRGCDKV 463
Query: 114 TIQGIQQFTS 123
G+ T
Sbjct: 464 ADDGLAHLTP 473
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL-DLS 62
L LQ L LS +N+T L + L L L+ LDL CG T GL L L AL L
Sbjct: 499 LTALQYLRLSQCWNLTDAGL--IHLRPLVALQHLDLSYCGNLTDVGLVHLTPLMALQHLD 556
Query: 63 SNYYLHGSLEGLANL---TNLQVLDLSGNQNLTTLGLANLPNL---KTLDLRDCGITTIQ 116
NY + + +GLA+L T LQ L L+ NLT GL +L L + LDL CG T
Sbjct: 557 LNYCENLTGDGLAHLRSLTTLQHLSLNQCWNLTDAGLVHLEPLTALQHLDLSYCGNFTDV 616
Query: 117 GIQQFTS 123
G+ TS
Sbjct: 617 GLVHLTS 623
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKN---LE 57
L L LQ LDLS N+T L L LT L+ LDL GC GLA L L+
Sbjct: 421 LTPLTALQYLDLSYCNNLTDAGLVHLKF--LTALQHLDLRGCDKVADDGLAHLTPLTALQ 478
Query: 58 ALDLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
AL LS L L L LT LQ L LS NLT GL +L L+ LDL CG
Sbjct: 479 ALSLSQCRNLTDAGLGHLKLLTALQYLRLSQCWNLTDAGLIHLRPLVALQHLDLSYCGNL 538
Query: 114 TIQGIQQFTS 123
T G+ T
Sbjct: 539 TDVGLVHLTP 548
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 69/134 (51%), Gaps = 15/134 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNL---KKLDLDGCGITTIQGLAKLKNL- 56
L L LQ LDLS G+LT +GL +LT L + LDL+ C T GLA L++L
Sbjct: 521 LRPLVALQHLDLSY-----CGNLTDVGLVHLTPLMALQHLDLNYCENLTGDGLAHLRSLT 575
Query: 57 --EALDLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDC 110
+ L L+ + L L L LT LQ LDLS N T +GL +L + L+ L+LR C
Sbjct: 576 TLQHLSLNQCWNLTDAGLVHLEPLTALQHLDLSYCGNFTDVGLVHLTSLMALQHLNLRGC 635
Query: 111 GITTIQGIQQFTSY 124
T G+ F +
Sbjct: 636 DRVTDVGLALFKIF 649
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L L LQ L LS N+T L L L LT L+ L L C T GL L+ L AL
Sbjct: 471 LTPLTALQALSLSQCRNLTDAGLGHLKL--LTALQYLRLSQCWNLTDAGLIHLRPLVALQ 528
Query: 60 DLSSNYYLHGSLEGLANLTNL---QVLDLSGNQNLTTLGLANLPNLKTL 105
L +Y + + GL +LT L Q LDL+ +NLT GLA+L +L TL
Sbjct: 529 HLDLSYCGNLTDVGLVHLTPLMALQHLDLNYCENLTGDGLAHLRSLTTL 577
>gi|52144762|ref|YP_082066.1| internalin protein [Bacillus cereus E33L]
gi|51978231|gb|AAU19781.1| possible internalin protein [Bacillus cereus E33L]
Length = 1112
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 31/131 (23%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
+++LR L+ +DLS N +I L +L NL+KL++ GI + L K++ L+
Sbjct: 590 ISSLRNLKSVDLSYNQIEDIKP-------LHSLENLEKLNISNNGIKNVPELFKMQTLKT 642
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLG--------------------L 96
LDLS+N + +L+G+ L NL L ++ N+ NL +G L
Sbjct: 643 LDLSNNKLDNAALDGIYQLENLDALLVNNNEINNLDEIGKVSKLNKLEMMGNKVRDISPL 702
Query: 97 ANLPNLKTLDL 107
ANL NL+ L+L
Sbjct: 703 ANLKNLQWLNL 713
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
+L+ ++ L++ A I S GL + NL+++ + G + I +++LK L+ +DLS
Sbjct: 201 DLKEIKELNIYAGQGIESLK----GLEYMENLERITIQGSDVRNIAPISQLKRLKVVDLS 256
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N ++E L NL L +L+L N+ L+ L ++T++L I+ I+ + +
Sbjct: 257 FNKI--ENVEPLVNLEKLDILELQNNRIADVTPLSQLKKVRTINLSGNKISDIKPLYNVS 314
Query: 123 S 123
S
Sbjct: 315 S 315
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TN+++L L + ++ ++ L+NL+++DLS N ++ L +L NL+ L++S
Sbjct: 567 GLEFMTNMEELILQNANMKNVKFISSLRNLKSVDLSYNQI--EDIKPLHSLENLEKLNIS 624
Query: 87 GNQNLTTLGLANLPNLKTLDLRD 109
N L + LKTLDL +
Sbjct: 625 NNGIKNVPELFKMQTLKTLDLSN 647
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 23/140 (16%)
Query: 1 LANLRYLQVLDLSAN--------YNITSGSLTRL-----------GLANLTNLKKLDLDG 41
L+ L+ ++ ++LS N YN++S L +L G+ L L L +
Sbjct: 288 LSQLKKVRTINLSGNKISDIKPLYNVSS--LRKLYVSNNKITDFTGIEQLNKLGTLGVGS 345
Query: 42 CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
G+ I+ ++++ + L+L N + L+ LT LQ L+L N L+NL N
Sbjct: 346 NGLVNIEPISQMSGIVELNLEKNDI--KDITSLSKLTGLQSLNLEENYVSDVSSLSNLIN 403
Query: 102 LKTLDLRDCGITTIQGIQQF 121
L L L I I+ IQ+
Sbjct: 404 LYELKLATNEIRDIRPIQEL 423
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 23 LTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQV 82
+T+ L + LK D GIT GL + N+E L L + +++ +++L NL+
Sbjct: 541 ITKEDLLTVKALKITDGKKEGITDFSGLEFMTNMEELILQNANM--KNVKFISSLRNLKS 598
Query: 83 LDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+DLS NQ L +L NL+ L++ + GI +
Sbjct: 599 VDLSYNQIEDIKPLHSLENLEKLNISNNGIKNV 631
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L ++ L+ LDLS N + + +L G+ L NL L ++ I + + K+ L L+
Sbjct: 634 LFKMQTLKTLDLSNN-KLDNAALD--GIYQLENLDALLVNNNEINNLDEIGKVSKLNKLE 690
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
+ N + LANL NLQ L+L+ N+
Sbjct: 691 MMGNKVR--DISPLANLKNLQWLNLANNK 717
>gi|356566707|ref|XP_003551571.1| PREDICTED: receptor-like protein 12-like [Glycine max]
Length = 1109
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 28 LANLTNLKKLDLDGCGITTI--QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
LANL+NL L L C +T + +G+ +++ L+ LD+S N LHGSL + LQ L+L
Sbjct: 247 LANLSNLTTLQLSNCALTDVFPKGIFQMQKLKILDVSYNLDLHGSLPNFTQIGYLQTLNL 306
Query: 86 SGNQNLT---TLGLANLPNLKTLDLRDC 110
S N N + ++NL L +DL C
Sbjct: 307 S-NTNFSGQLPGTISNLKQLAIVDLSSC 333
>gi|212540112|ref|XP_002150211.1| protein phosphatase PP1 regulatory subunit Sds22, putative
[Talaromyces marneffei ATCC 18224]
gi|210067510|gb|EEA21602.1| protein phosphatase PP1 regulatory subunit Sds22, putative
[Talaromyces marneffei ATCC 18224]
Length = 348
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL NL L++L L IT ++ L+ L NL+ L + SN S+ GL L NL+ L +S
Sbjct: 187 GLDNLKALEQLWLGKNKITEMKNLSSLSNLKILSIQSNRL--TSITGLNELPNLEELYIS 244
Query: 87 GNQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N LT L GL N NL+ LD + +T ++GI Q T
Sbjct: 245 HNA-LTDLSGLENNKNLRVLDFSNNKVTKLEGISQLTE 281
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL+ L+ L L N IT L++L+NLK L + +T+I GL +L NLE L
Sbjct: 188 LDNLKALEQLWLGKN-KITEMK----NLSSLSNLKILSIQSNRLTSITGLNELPNLEELY 242
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+S N L GL N NL+VLD S N+ G++ L L+ + G+++ + +++
Sbjct: 243 ISHNAL--TDLSGLENNKNLRVLDFSNNKVTKLEGISQLTELEEVWASSNGLSSFEEVER 300
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 21 GSLTRLGLANLTNLKKLDLDGCGITTIQGLAKL-KNLEALDLSSNYYLHGSLEGLANLTN 79
++T L L T L++L L I+ I+ + L L+ LDL N H ++GL +L N
Sbjct: 70 SNITALKLERFTKLERLCLRQNQISRIELPSTLGATLKELDLYDNLISH--VKGLDDLVN 127
Query: 80 LQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
L +LDLS N+ +++L L + I+TI+G+++
Sbjct: 128 LTLLDLSFNKIKHIKNVSHLTKLTDIFFVQNRISTIEGLEELV 170
>gi|147778645|emb|CAN76110.1| hypothetical protein VITISV_036332 [Vitis vinifera]
Length = 1472
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 22 SLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGS-LEGLANLTNL 80
SLT L + L NLK LD G +Q L L LE ++ + GS L+ L +LT L
Sbjct: 1196 SLTSLEIVKLPNLKSLDSGG-----LQQLTSLLKLEIINCPELQFSTGSVLQHLISLTEL 1250
Query: 81 QVLDLSGNQNLTTLGLANLPNLKTLDLRDC 110
Q+ + Q+LT +GL +L +L+TL + +C
Sbjct: 1251 QIDECPNLQSLTEVGLQHLTSLETLHIENC 1280
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 12/89 (13%)
Query: 22 SLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQ 81
SLT +GL +LT+L+ L ++ C KL+ L L + L+ L +L +Q
Sbjct: 1260 SLTEVGLQHLTSLETLHIENC--------PKLQYLTKQRLQDS----SGLQHLISLKQIQ 1307
Query: 82 VLDLSGNQNLTTLGLANLPNLKTLDLRDC 110
+ D Q+LT GL +L +LKTL++ DC
Sbjct: 1308 IKDCPMLQSLTKEGLQHLISLKTLEIIDC 1336
>gi|347548625|ref|YP_004854953.1| putative internalin B [Listeria ivanovii subsp. ivanovii PAM 55]
gi|346981696|emb|CBW85667.1| Putative internalin B (ivanovii) [Listeria ivanovii subsp. ivanovii
PAM 55]
Length = 1107
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G+ L+NL+K+ I I LA L LE + L+ N + LANL+ L VLDLS
Sbjct: 91 GVQYLSNLRKIFFQKNQIKDISDLASLIKLEEVRLNGNQI--SDISALANLSKLNVLDLS 148
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
NQ L+NL LK+L+L D +T I ++ T+
Sbjct: 149 NNQIKDIDALSNLVKLKSLNLDDNQLTDISKLESLTA 185
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 54/116 (46%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
LANL L VLDLS N + + L+NL LK L+LD +T I L L L+ L
Sbjct: 136 LANLSKLNVLDLSNN------QIKDIDALSNLVKLKSLNLDDNQLTDISKLESLTALKEL 189
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ N + L+ LTNL L + NQ L+ L NL L R+ + I
Sbjct: 190 FFTGNQIT--DIRVLSKLTNLTELVFNKNQVTNIAALSKLTNLTALGFRENNVKDI 243
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA L +L L D +T I LAKL NL + + N + + LANLT L+ L G
Sbjct: 290 LAKLNHLAYLVFDDNQVTNIDALAKLPNLIGVMFNDNRVRN--MSPLANLTKLEKLHAEG 347
Query: 88 NQNLTTLGLANLPNLKTLDL-RDC 110
N L++L LK L L R+C
Sbjct: 348 NYIQDVKALSSLTKLKELKLDRNC 371
>gi|169836059|ref|ZP_02869247.1| possible internalin protein [candidate division TM7 single-cell
isolate TM7a]
Length = 432
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 33 NLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLT 92
N +K++L G+ I+ +A +N++ LDL N ++ L NL NL+VL ++ NQ
Sbjct: 53 NAEKIELKNLGLEEIKCIADYRNVKELDLRWNQI--KDVKPLENLKNLEVLKINFNQVKD 110
Query: 93 TLGLANLPNLKTLDLRDCGITTIQGI 118
L NLPNLK L L + I+ + GI
Sbjct: 111 IKPLLNLPNLKELWLHNNKISNLSGI 136
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 15 NYNITSGSLTRLGL------ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH 68
N N L LGL A+ N+K+LDL I ++ L LKNLE L ++ N
Sbjct: 51 NVNAEKIELKNLGLEEIKCIADYRNVKELDLRWNQIKDVKPLENLKNLEVLKINFNQV-- 108
Query: 69 GSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL 107
++ L NL NL+ L L N+ G+ L L+ LD+
Sbjct: 109 KDIKPLLNLPNLKELWLHNNKISNLSGIGKLAKLEHLDV 147
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL+ L+VL + N+N L NL NLK+L L I+ + G+ KL LE LD
Sbjct: 92 LENLKNLEVLKI--NFNQVKDIKP---LLNLPNLKELWLHNNKISNLSGIGKLAKLEHLD 146
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDL 85
+S N +G ++ ++NL L+ L+L
Sbjct: 147 VSFNPLKNG-VDEISNLKKLKRLEL 170
>gi|46447626|ref|YP_008991.1| hypothetical protein pc1992 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401267|emb|CAF24716.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 537
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 63/126 (50%), Gaps = 13/126 (10%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL---DLSS 63
++ L+ S N +T L L L + NLK L+L C T GLA L L AL DLS
Sbjct: 241 IEELNFSDNVYLTDAYL--LALKDCKNLKMLNLKSCKNLTDAGLAHLTPLTALRRLDLSF 298
Query: 64 NYYLHGSLEGLANLTNL---QVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQG 117
L + GLANLT L Q LDLS +NLT GLA+L L LDL CG T G
Sbjct: 299 CRNLTDA--GLANLTPLIALQHLDLSWCKNLTDAGLAHLTPLGALHYLDLSICGKLTDAG 356
Query: 118 IQQFTS 123
+ T
Sbjct: 357 LAHLTP 362
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNL---KKLDLDGCGITTIQGLAKLKNLE 57
L L LQ LDLS N+T GLA+LT L LDL CG T GLA L L
Sbjct: 310 LTPLIALQHLDLSWCKNLTDA-----GLAHLTPLGALHYLDLSICGKLTDAGLAHLTPLV 364
Query: 58 ALD-LSSNYYLHGSLEGLANL---TNLQVLDLSGNQNLTTLGLANLPNLKTL 105
L L+ Y S GLA+L LQ LDLS QNLT GLA+L L L
Sbjct: 365 DLQHLNLRYCQKLSDAGLAHLRSLVTLQHLDLSYCQNLTDAGLAHLARLTAL 416
>gi|12054727|emb|CAC20606.1| internalin B [Listeria ivanovii]
Length = 1078
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G+ L+NL+K+ I I LA L LE + L+ N + LANL+ L VLDLS
Sbjct: 91 GVQYLSNLRKIFFQKNQIKDISDLASLIKLEEVRLNGNQI--SDISALANLSKLNVLDLS 148
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
NQ L+NL LK+L+L D +T I ++ T+
Sbjct: 149 NNQIKDIDALSNLVKLKSLNLDDNQLTDISRLESLTA 185
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 54/116 (46%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
LANL L VLDLS N + + L+NL LK L+LD +T I L L L+ L
Sbjct: 136 LANLSKLNVLDLSNN------QIKDIDALSNLVKLKSLNLDDNQLTDISRLESLTALKEL 189
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ N + L+ LTNL L + NQ L+ L NL L R+ + I
Sbjct: 190 FFTGNQIT--DIRVLSKLTNLTELVFNKNQVTNIAALSKLTNLTALGFRENNVKDI 243
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA L +L L D +T I LAKL NL + + N + + LANLT L+ L G
Sbjct: 290 LAKLNHLAYLVFDDNQVTNIDALAKLPNLIGVMFNDNRVRN--MSPLANLTKLEKLHAEG 347
Query: 88 NQNLTTLGLANLPNLKTLDL-RDC 110
N L++L LK L L R+C
Sbjct: 348 NYIQDVKALSSLTKLKELKLDRNC 371
>gi|229029099|ref|ZP_04185198.1| Internalin [Bacillus cereus AH1271]
gi|228732379|gb|EEL83262.1| Internalin [Bacillus cereus AH1271]
Length = 772
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ NL+ L V AN IT S ANL L L L G + + L K+ NLE+LD
Sbjct: 247 MPNLKSLTV----ANAKITDPSF----FANLKQLNHLALRGNEFSDVTPLVKMDNLESLD 298
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
LS+N ++ L + N++ L LSGNQ LA + L L+L + IT +
Sbjct: 299 LSNNKIT--NVAPLVEMKNVKSLYLSGNQIEDVTALAKMEQLGYLNLANNKITNV 351
>gi|289433887|ref|YP_003463759.1| peptidoglycan bound protein (LPXTG motif) [Listeria seeligeri
serovar 1/2b str. SLCC3954]
gi|289170131|emb|CBH26671.1| peptidoglycan bound protein (LPXTG motif) [Listeria seeligeri
serovar 1/2b str. SLCC3954]
Length = 593
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 59/111 (53%), Gaps = 7/111 (6%)
Query: 14 ANYNITSGSLTRLGLANLTNLKKLDLDGCGITT--IQGLAKLKNLEALDLSSNYYLHGSL 71
AN +T SL LA+L L + L G IT+ I L L+NL +L +S + L
Sbjct: 100 ANTQVTDFSL----LASLPKLTNISLAGSSITSSSIPNLNNLQNLTSLSISPASLDNSVL 155
Query: 72 EGLANLTNLQVLDLSGNQNLT-TLGLANLPNLKTLDLRDCGITTIQGIQQF 121
+ + NL L+L N +LT + L +LPNL TL ++ CGI +GI+ F
Sbjct: 156 TKINKIPNLTFLELDSNYSLTDIMPLQSLPNLVTLFVQFCGIHDYRGIENF 206
>gi|240254535|ref|NP_180117.4| receptor like protein 21 [Arabidopsis thaliana]
gi|330252611|gb|AEC07705.1| receptor like protein 21 [Arabidopsis thaliana]
Length = 935
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLA-NLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L+ LR L+++DLS NY + L A +LT L + G I+GL L NLE L
Sbjct: 120 LSGLRNLKIMDLSTNY-FNYSTFPFLNAATSLTTLILTYNEMDGPFPIKGLKDLTNLELL 178
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL 107
DL +N L+GS++ L +L L+ LDLS N+ +++ L L NL L++
Sbjct: 179 DLRANK-LNGSMQELIHLKKLKALDLSSNKFSSSMELQELQNLINLEV 225
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDL---DGCGITTIQGLAKLKNLE 57
L +L+ L+ LDLS+N S S+ L NL NL+ L L G I+ KLKNL
Sbjct: 192 LIHLKKLKALDLSSNK--FSSSMELQELQNLINLEVLGLAQNHVDGPIPIEVFCKLKNLR 249
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
LDL N+++ L +L L+VLDLS NQ
Sbjct: 250 DLDLKGNHFVGQIPLCLGSLKKLRVLDLSSNQ 281
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 48 QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ---NLTTLGLANLPNLKT 104
+ L+ L+NL+ +DLS+NY+ + + L T+L L L+ N+ GL +L NL+
Sbjct: 118 RSLSGLRNLKIMDLSTNYFNYSTFPFLNAATSLTTLILTYNEMDGPFPIKGLKDLTNLEL 177
Query: 105 LDLR 108
LDLR
Sbjct: 178 LDLR 181
>gi|119189739|ref|XP_001245476.1| hypothetical protein CIMG_04917 [Coccidioides immitis RS]
Length = 350
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 67/127 (52%), Gaps = 8/127 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-----GLANLTNLKKLDLDGCGITTIQGLAKLKN 55
L L L+ L+L AN I G R L +LT+L++L L IT I+ ++ L N
Sbjct: 159 LEGLTKLRNLELGAN-RIRVGEHPRQKREIENLDDLTSLEELWLGKNKITEIKNISHLSN 217
Query: 56 LEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L+ L L SN SL GL+ LTNL+ L +S N GL +L NL LD+ + I+T+
Sbjct: 218 LKILSLPSNRL--TSLSGLSGLTNLEELYVSHNAITHISGLESLNNLHVLDISNNQISTL 275
Query: 116 QGIQQFT 122
+ I +
Sbjct: 276 ENISHLS 282
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
+++L+NLK L L +T++ GL+ L NLE L +S N H S GL +L NL VLD+S
Sbjct: 212 ISHLSNLKILSLPSNRLTSLSGLSGLTNLEELYVSHNAITHIS--GLESLNNLHVLDISN 269
Query: 88 NQNLTTLGLANLPNLKTL 105
NQ T +++L +++ L
Sbjct: 270 NQISTLENISHLSHIEEL 287
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 7/89 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+++L L++L L +N +TS S GL+ LTNL++L + IT I GL L NL LD
Sbjct: 212 ISHLSNLKILSLPSN-RLTSLS----GLSGLTNLEELYVSHNAITHISGLESLNNLHVLD 266
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
+S+N +LE +++L++++ L S N+
Sbjct: 267 ISNNQI--STLENISHLSHIEELWASNNK 293
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 13/103 (12%)
Query: 27 GLANLTNLKKLDLDGCGITT---------IQGLAKLKNLEALDLSSNYYLHGSLEGLANL 77
GL LT L+ L+L I I+ L L +LE L L N ++ +++L
Sbjct: 158 GLEGLTKLRNLELGANRIRVGEHPRQKREIENLDDLTSLEELWLGKNKI--TEIKNISHL 215
Query: 78 TNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQ 119
+NL++L L N+ LT+L GL+ L NL+ L + IT I G++
Sbjct: 216 SNLKILSLPSNR-LTSLSGLSGLTNLEELYVSHNAITHISGLE 257
>gi|255563429|ref|XP_002522717.1| Protein phosphatase 1 regulatory subunit, putative [Ricinus
communis]
gi|223538067|gb|EEF39679.1| Protein phosphatase 1 regulatory subunit, putative [Ricinus
communis]
Length = 673
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 7 LQVLDLSAN--YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN 64
L+VL+LS N IT+GSL R L L+L I+TI+GL +L L LDLS N
Sbjct: 406 LRVLNLSGNAIVRITAGSLPR-------GLHVLNLSKNKISTIEGLRELTRLRVLDLSYN 458
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
GLA+ ++L+ L L+GN+ GL L L LDLR I+T + + Q +
Sbjct: 459 RIFRIG-HGLASCSSLKELYLAGNKISEVEGLHRLLKLTVLDLRFNKISTAKCLGQLAA 516
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L L+VLDLS N G GLA+ ++LK+L L G I+ ++GL +L L LD
Sbjct: 444 LRELTRLRVLDLSYNRIFRIGH----GLASCSSLKELYLAGNKISEVEGLHRLLKLTVLD 499
Query: 61 LSSNYYLHGSLEG--LANLTNLQVLDLSGNQNLTTLG 95
L N G AN +LQ + L GN +G
Sbjct: 500 LRFNKISTAKCLGQLAANYNSLQAISLEGNPAQKNVG 536
>gi|431910521|gb|ELK13592.1| Leucine-rich repeat-containing protein 31 [Pteropus alecto]
Length = 713
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 61/122 (50%), Gaps = 27/122 (22%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L L+ L+VLDLS N NI GSL + GL +NLK L L CG++ K+++
Sbjct: 227 LPMLQSLEVLDLSINRNI-GGSLNSIAQGLKCTSNLKVLKLQSCGLSQ-------KSVKG 278
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL------TTLGLANLPNLKTLDLRDCGI 112
LD + Y L L+ LDLS N+ L + + LA L L+ LDL C +
Sbjct: 279 LDAAFRY-----------LGELRKLDLSCNKELGGGFEDSPVQLATLGRLEVLDLHQCSL 327
Query: 113 TT 114
TT
Sbjct: 328 TT 329
>gi|423509242|ref|ZP_17485773.1| hypothetical protein IG3_00739 [Bacillus cereus HuA2-1]
gi|402456533|gb|EJV88306.1| hypothetical protein IG3_00739 [Bacillus cereus HuA2-1]
Length = 759
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ NL+ L V AN IT S ANL L L L G + + L K+ NLE+LD
Sbjct: 241 MPNLKSLTV----ANAKITDPSF----FANLKQLNHLALRGNEFSDVTPLVKMDNLESLD 292
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
LS+N ++ L + N++ L LSGNQ LA + L L+L + IT +
Sbjct: 293 LSNNKIT--NVAPLIEMKNVKSLYLSGNQIEDVTALAKMEQLDYLNLANNKITNV 345
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA +T L +LDL + I L+ L NL+ LDL +NY L ++NL L L
Sbjct: 413 LAKMTQLTELDLPNNELKDITPLSSLVNLQKLDLEANYI--SDLTPVSNLKKLVFLSFVA 470
Query: 88 NQ 89
N+
Sbjct: 471 NE 472
>gi|359483099|ref|XP_002262931.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At4g36180-like [Vitis vinifera]
Length = 1231
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 9/129 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT---TIQGLAKLKNLE 57
L++L+ L++LD+S N +L LG +T+LK L + G+ IQ LA +NLE
Sbjct: 141 LSSLKKLEILDISGN-EFDKSALKSLGA--ITSLKTLAIRSMGLDGSFPIQELASSRNLE 197
Query: 58 ALDLSSNYYLHGSL-EGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGITT 114
LDLS N L +GL +L L++L +SGN+ ++ L + +LKTL L G+
Sbjct: 198 VLDLSYNDLESFQLVQGLLSLKKLEILAISGNEFDKSVIKSLGAITSLKTLVLCRIGLNG 257
Query: 115 IQGIQQFTS 123
IQ F S
Sbjct: 258 SFPIQDFAS 266
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 68/159 (42%), Gaps = 52/159 (32%)
Query: 1 LANLRYLQVLDLSAN----YNITSG--SLTRL----------------GLANLTNLKKLD 38
LA+ R L+VLDLS N + + G SL +L L +T+LK L
Sbjct: 190 LASSRNLEVLDLSYNDLESFQLVQGLLSLKKLEILAISGNEFDKSVIKSLGAITSLKTLV 249
Query: 39 LDGCGIT---TIQGLAKLKNLEALDLSSNYY-----------------------LHGSL- 71
L G+ IQ A L NLE LDLS N + L+GSL
Sbjct: 250 LCRIGLNGSFPIQDFASLSNLEILDLSYNSFSGILPSSIRLMSSLKSLSLAGNQLNGSLP 309
Query: 72 -EGLANLTNLQVLDLSGN--QNLTTLGLANLPNLKTLDL 107
+G L LQ LDL+ N Q + L NL +L+ LDL
Sbjct: 310 NQGFCQLNKLQELDLNSNFFQGILPPCLNNLTSLRLLDL 348
>gi|441472950|emb|CCQ22704.1| Internalin-A [Listeria monocytogenes N53-1]
Length = 196
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 24 TRLGLANLTN-LKKLDLDGC-GITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQ 81
T G +N+T+ + + DLDG G+TTI+G+ L NL +L+L N + L L NLT +
Sbjct: 14 TATGKSNVTDTVTQADLDGITGVTTIEGIQYLNNLISLELKDNQITN--LTPLKNLTKIT 71
Query: 82 VLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L+LSGN +A L ++KTLDL IT +
Sbjct: 72 ELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 105
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 86 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITDISPLAGLTNLQYL 139
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
+ + L LANL+ L L N+ LA LPNL + L+D IT
Sbjct: 140 SIGNTQV--SDLTPLANLSKLTNLRADDNKISDISPLAGLPNLIEVHLKDNQIT 191
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 64 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 116
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L L N + LA LTNLQ L + Q LANL L L D I+ I +
Sbjct: 117 LYLDLNQI--TDISPLAGLTNLQYLSIGNTQVSDLTPLANLSKLTNLRADDNKISDISPL 174
>gi|328791867|ref|XP_396616.3| PREDICTED: protein phosphatase 1 regulatory subunit 7 [Apis
mellifera]
Length = 311
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L LT L +L+L I I+ L L NLE LDLS N +EGL NL NLQ L LS
Sbjct: 74 NLDTLTTLVELELRDNQIVIIENLDVLVNLELLDLSFNRI--KKIEGLENLLNLQKLFLS 131
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTI---QGIQQFTS 123
N+ L++L NL TL+L D I I +G++ T+
Sbjct: 132 SNKIQCIENLSHLKNLITLELGDNKIREIINLEGLENLTN 171
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 7 LQVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
++ LD+ N + S R+ GL NL NL+KL L I I+ L+ LKNL L+L
Sbjct: 94 IENLDVLVNLELLDLSFNRIKKIEGLENLLNLQKLFLSSNKIQCIENLSHLKNLITLELG 153
Query: 63 SNYYLH-GSLEGLANLTNL 80
N +LEGL NLTNL
Sbjct: 154 DNKIREIINLEGLENLTNL 172
>gi|67516287|ref|XP_658029.1| hypothetical protein AN0425.2 [Aspergillus nidulans FGSC A4]
gi|40747368|gb|EAA66524.1| hypothetical protein AN0425.2 [Aspergillus nidulans FGSC A4]
Length = 910
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL LT +K L+L I I+ L L LE L L N ++ L LTNL++L +
Sbjct: 727 GLEGLTEIKNLELGANKIREIENLETLSALEELWLGKNKITE--MKNLDALTNLRILSIQ 784
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
N+ + GL++L NL+ L + IT + G++
Sbjct: 785 SNRLTSLKGLSSLKNLEELYVSHNAITDLAGLE 817
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LTNL+ L + +T+++GL+ LKNLE L +S N L GL + L+VLD S
Sbjct: 772 LDALTNLRILSIQSNRLTSLKGLSSLKNLEELYVSHNAIT--DLAGLESNNALRVLDFSN 829
Query: 88 NQNLTTLGLANLPNLKTL 105
NQ L++L L+ L
Sbjct: 830 NQVSKLEHLSHLKELEEL 847
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 53/110 (48%), Gaps = 16/110 (14%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L NLR L +I S LT L GL++L NL++L + IT + GL L L
Sbjct: 775 LTNLRIL---------SIQSNRLTSLKGLSSLKNLEELYVSHNAITDLAGLESNNALRVL 825
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ----NLTTLGLANLPNLKTL 105
D S+N LE L++L L+ L S NQ N L + NLKT+
Sbjct: 826 DFSNNQV--SKLEHLSHLKELEELWASNNQLSSFNEVERELKDKENLKTV 873
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L L+ L++L L IT ++ L L NL L + SN SL+GL++L NL+ L +S
Sbjct: 750 LETLSALEELWLGKNKITEMKNLDALTNLRILSIQSNRLT--SLKGLSSLKNLEELYVSH 807
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
N GL + L+ LD + ++ ++ +
Sbjct: 808 NAITDLAGLESNNALRVLDFSNNQVSKLEHLSHL 841
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 34 LKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT 93
L++LDL I+ ++GL NL +LDLS N H ++ +++L L+ L N+
Sbjct: 668 LQELDLYDNLISHLKGLDDFHNLTSLDLSFNKLKH--IKNISHLVKLKDLYFVQNKISKI 725
Query: 94 LGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
GL L +K L+L I I+ ++ ++
Sbjct: 726 EGLEGLTEIKNLELGANKIREIENLETLSA 755
>gi|423626307|ref|ZP_17602084.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus VD148]
gi|401252861|gb|EJR59112.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus VD148]
Length = 943
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL ++TNL+KL L G +T I ++KL++L+ +DL+SN ++ + L N+ +L L
Sbjct: 236 GLEHMTNLEKLTLRGSNVTDISAISKLRDLKYVDLTSNPI--KNIHPIEQLENINMLFLR 293
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQ 116
N+ L+ + +KTLDL I IQ
Sbjct: 294 DNKISDLTPLSKMKKIKTLDLVGNNIEDIQ 323
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+ L L+G G+ I+ ++ LK L +++S N + L++L NLQ L+L+
Sbjct: 584 GLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSHNQI--EDITPLSSLKNLQWLNLA 641
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
N + ++ +L +L+L I ++ + Q +
Sbjct: 642 DNHIKDVTVIGSMLDLLSLNLAGNEICDVRPLIQLGQW 679
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
++ ++NL +L++ I I L+KL L+ L+L NY + L+NLT+L ++L
Sbjct: 369 ISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYI--SDISPLSNLTDLHEMNLGA 426
Query: 88 NQ 89
N+
Sbjct: 427 NE 428
>gi|356561574|ref|XP_003549056.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
GSO2-like [Glycine max]
Length = 932
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 11/120 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI--QGLAKLKNLEA 58
L L+YL LDLS+NY + + + LG +L +L+ LDL G + L L NL+
Sbjct: 103 LLELKYLNRLDLSSNYFVLTPIPSFLG--SLESLRYLDLSLSGFMGLIPHQLGNLSNLQH 160
Query: 59 LDLSSNYYLH-GSLEGLANLTNLQVLDLSGNQNLTTLG-----LANLPNLKTLDLRDCGI 112
L+L NY L +L ++ L++L+ LDLSG+ +L G L+ LP+L L L C I
Sbjct: 161 LNLGYNYALQIDNLNWISRLSSLEYLDLSGS-DLHKQGNWLQVLSELPSLSELHLESCQI 219
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI----TTIQGLAKLKNL 56
L NL LQ L+L NY + +L ++ L++L+ LDL G + +Q L++L +L
Sbjct: 152 LGNLSNLQHLNLGYNYALQIDNLN--WISRLSSLEYLDLSGSDLHKQGNWLQVLSELPSL 209
Query: 57 EALDLSSNYYLH-GSLEGLANLTNLQVLDLSGN 88
L L S + G +G N T+LQVLDLS N
Sbjct: 210 SELHLESCQIDNLGPPKGKINFTHLQVLDLSIN 242
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 26/112 (23%)
Query: 3 NLRYLQVLDLSAN-----------------------YNITSGSLTRLGLANLTNLKKLDL 39
N +LQVLDLS N N+ G + ++ +++L N+K LDL
Sbjct: 230 NFTHLQVLDLSINNLNQQIPSWLFNLSTALVQLDLHSNLLQGEIPQI-ISSLQNIKNLDL 288
Query: 40 DGCGIT--TIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
++ L +LK+LE L+LS+N + ANL++L+ L+L+ N+
Sbjct: 289 QNNQLSGPLPDSLGQLKHLEVLNLSNNTFTCPIPSPFANLSSLRTLNLAHNR 340
>gi|293376652|ref|ZP_06622879.1| putative internalin A [Turicibacter sanguinis PC909]
gi|292644710|gb|EFF62793.1| putative internalin A [Turicibacter sanguinis PC909]
Length = 510
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 57/109 (52%), Gaps = 21/109 (19%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL L LD + YNI+ GL+NLTNL L LD I I LA L NL ALD
Sbjct: 192 LSNLTEL-TLDHNQIYNIS-------GLSNLTNLITLTLDRNQIEDISALATLINLNALD 243
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ-----------NLTTLGLAN 98
LS N+ + LA+LT L VL L NQ NLT LGL+N
Sbjct: 244 LSYNHI--KIINALASLTRLSVLYLDYNQINDLSALSSLINLTKLGLSN 290
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L +LQ+L L+ N + SL L+NL +L LD I I GL+ L NL L
Sbjct: 167 LHQLVHLQMLHLADNEIVDISSLN-----TLSNLTELTLDHNQIYNISGLSNLTNLITLT 221
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
L N + LA L NL LDLS N LA+L L L
Sbjct: 222 LDRNQI--EDISALATLINLNALDLSYNHIKIINALASLTRLSVL 264
>gi|224144186|ref|XP_002336117.1| predicted protein [Populus trichocarpa]
gi|222873047|gb|EEF10178.1| predicted protein [Populus trichocarpa]
Length = 973
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG----ITTIQGLAKLKNL 56
L NL+YL DLS YN + S+ + + +T+LK L L GCG I++ QG LKNL
Sbjct: 295 LKNLKYL---DLS--YNTLNNSIFQ-AIETMTSLKTLKLKGCGLNGQISSTQGFLNLKNL 348
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSG----NQNLTTLGLANLPNLKTLDLRD 109
E LDLS N + L+ + +T+L+ L L + TT GL +L +L+ L + D
Sbjct: 349 EYLDLSDNTLDNNILQSIRAMTSLKTLGLQSCRLNGRIPTTQGLCDLNHLQELYMSD 405
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 55/128 (42%), Gaps = 31/128 (24%)
Query: 27 GLANLTNLKKLDLDGC-------------------------GITTIQGLAKLKNLEALDL 61
L NL+ LK+L LDGC G G LKNL+ LDL
Sbjct: 244 ALQNLSFLKELYLDGCSLDEHSLQSLGALPSLKNLSLQELNGTVPYGGFLYLKNLKYLDL 303
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSG----NQNLTTLGLANLPNLKTLDLRDCGI--TTI 115
S N + + + +T+L+ L L G Q +T G NL NL+ LDL D + +
Sbjct: 304 SYNTLNNSIFQAIETMTSLKTLKLKGCGLNGQISSTQGFLNLKNLEYLDLSDNTLDNNIL 363
Query: 116 QGIQQFTS 123
Q I+ TS
Sbjct: 364 QSIRAMTS 371
>gi|168184935|ref|ZP_02619599.1| putative internalin [Clostridium botulinum Bf]
gi|237795390|ref|YP_002862942.1| leucine-rich repeat-containing protein [Clostridium botulinum Ba4
str. 657]
gi|182671975|gb|EDT83936.1| putative internalin [Clostridium botulinum Bf]
gi|229263401|gb|ACQ54434.1| leucine-rich repeat protein [Clostridium botulinum Ba4 str. 657]
Length = 332
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
++ L NL+ L++ C ++ + + LK L+ LD+S+N +L GL NLTNL+ L ++
Sbjct: 142 ISTLKNLENLEIVDCKLSNVSIVKDLKRLKRLDISNNEI--SNLNGLENLTNLKELYMAN 199
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFTS 123
N N+T L + NL L LD+ D IT+I+ ++ S
Sbjct: 200 N-NITNLKPIHNLLKLTNLDISDNKITSIKELKNMKS 235
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 67/124 (54%), Gaps = 12/124 (9%)
Query: 1 LANLRYLQVLDLS-ANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L NL L+++D +N +I + +L LK+LD+ I+ + GL L NL+ L
Sbjct: 145 LKNLENLEIVDCKLSNVSI---------VKDLKRLKRLDISNNEISNLNGLENLTNLKEL 195
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
+++N +L+ + NL L LD+S N+ + L N+ ++K L++ + I+ ++GI+
Sbjct: 196 YMANNNI--TNLKPIHNLLKLTNLDISDNKITSIKELKNMKSIKELNICNNNISNLEGIE 253
Query: 120 QFTS 123
+
Sbjct: 254 NMSE 257
>gi|168051381|ref|XP_001778133.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670455|gb|EDQ57023.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L L+VL+LS N I G GLAN T+L+++ L G I+ I+GL +L L +D
Sbjct: 594 LRELSRLRVLNLSHNRIIRIGH----GLANCTSLREIYLAGNKISEIEGLHRLLKLSFID 649
Query: 61 LSSNYYLHGSLEG--LANLTNLQVLDLSGNQNLTTLG 95
LS N G AN +LQ ++L GN + LG
Sbjct: 650 LSFNKIASAKSIGQLAANYNSLQAINLLGNPLHSNLG 686
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 7 LQVLDLSAN--YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN 64
L+ L+LSAN + G L + +L LDL I I+GL +L L L+LS N
Sbjct: 556 LKTLNLSANAIVRMLPGCLPK-------SLHTLDLSRNKIVVIEGLRELSRLRVLNLSHN 608
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
+ GLAN T+L+ + L+GN+ GL L L +DL I + + I Q +
Sbjct: 609 RIIRIG-HGLANCTSLREIYLAGNKISEIEGLHRLLKLSFIDLSFNKIASAKSIGQLAA 666
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 33 NLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLT 92
NLK L+L I + K+L LDLS N + +EGL L+ L+VL+LS N+ +
Sbjct: 555 NLKTLNLSANAIVRMLPGCLPKSLHTLDLSRNKIV--VIEGLRELSRLRVLNLSHNRIIR 612
Query: 93 T-LGLANLPNLKTLDLRDCGITTIQGIQQF 121
GLAN +L+ + L I+ I+G+ +
Sbjct: 613 IGHGLANCTSLREIYLAGNKISEIEGLHRL 642
>gi|456982733|gb|EMG19248.1| leucine rich repeat protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 299
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 75/144 (52%), Gaps = 25/144 (17%)
Query: 1 LANLRYLQVLDLSANYNIT-----------------SGSLTRLG--LANLTNLKKLDLDG 41
+ L+ LQ LDLS N T S LT L + L NL+ L+L
Sbjct: 105 IGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRN 164
Query: 42 CGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLAN 98
+TT+ + + +L+NL++LDL SN E + L NLQVLDL NQ LTTL G+
Sbjct: 165 NRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKE-IGQLKNLQVLDLGSNQ-LTTLPEGIGQ 222
Query: 99 LPNLKTLDLRDCGITTI-QGIQQF 121
L NL+TLDL +TT+ Q I+Q
Sbjct: 223 LKNLQTLDLDSNQLTTLPQEIKQL 246
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 62/108 (57%), Gaps = 9/108 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ L+ LDL +N ++ + L NL+ LDL +TT+ +G+ +LKNL+ L
Sbjct: 174 IEQLQNLKSLDLRSN----QLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTL 229
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTL 105
DL SN L + + L NLQ+LDLS NQ L TL + L NL+TL
Sbjct: 230 DLDSN-QLTTLPQEIKQLKNLQLLDLSYNQ-LKTLPKEIEQLKNLQTL 275
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 30/140 (21%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ L+ L+LS N T + L L+ L LD +TT+ Q + +L+NL++L
Sbjct: 36 IGQLKNLKSLNLSYNQIKTIPK----EIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 91
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGN------------QNLTTLGLAN--------- 98
DLS+N L + + L NLQ LDLS N QNL L L +
Sbjct: 92 DLSTN-RLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTILPNE 150
Query: 99 ---LPNLKTLDLRDCGITTI 115
L NL+TL+LR+ +TT+
Sbjct: 151 IGQLKNLQTLNLRNNRLTTL 170
>gi|440793429|gb|ELR14613.1| protein phosphatase 1, regulatory subunit 7, putative [Acanthamoeba
castellanii str. Neff]
Length = 314
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L NL+ L L IT IQGL +L NL L + SN + GL NL L+ L LS
Sbjct: 179 GLDRLVNLENLWLGKNKITRIQGLDQLTNLRKLSIQSNRL--TEITGLDNLRLLEELYLS 236
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N GL NL +LKTLDL I ++ ++ TS
Sbjct: 237 HNGIDRIAGLDNLVSLKTLDLSANRIAHLENLEHLTS 273
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 22 SLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNL 80
+TR+ GL LTNL+KL + +T I GL L+ LE L LS N + GL NL +L
Sbjct: 195 KITRIQGLDQLTNLRKLSIQSNRLTEITGLDNLRLLEELYLSHNGI--DRIAGLDNLVSL 252
Query: 81 QVLDLSGNQNLTTLGLANLPNLKTL 105
+ LDLS N+ +A+L NL+ L
Sbjct: 253 KTLDLSANR------IAHLENLEHL 271
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
I TI+GL +L NLE L L N ++GL LTNL+ L + N+ GL NL L+
Sbjct: 174 IRTIEGLDRLVNLENLWLGKNKI--TRIQGLDQLTNLRKLSIQSNRLTEITGLDNLRLLE 231
Query: 104 TLDLRDCGITTIQGIQQFTS 123
L L GI I G+ S
Sbjct: 232 ELYLSHNGIDRIAGLDNLVS 251
>gi|24216020|ref|NP_713501.1| hypothetical protein LA_3321 [Leptospira interrogans serovar Lai
str. 56601]
gi|386075101|ref|YP_005989420.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
gi|24197248|gb|AAN50519.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
56601]
gi|353458892|gb|AER03437.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
Length = 452
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 69/120 (57%), Gaps = 13/120 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTIQ-GLAKLKNLE 57
+ LR LQ LDLS N SLT L + L NL++LDL + T+ + +LKNL+
Sbjct: 90 IGQLRNLQELDLSFN------SLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQ 143
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
LDL+SN L + + L NLQ LDL+ N+ LTTL + L NLKTL+L +TT+
Sbjct: 144 ELDLNSN-KLTTLPKEIRQLRNLQELDLNSNK-LTTLPKEIGQLQNLKTLNLIVTQLTTL 201
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 20 SGSLTRLG--LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
SG+ T L L N ++ LDL +TT+ + + +L+NL+ LDLS N L + +
Sbjct: 34 SGTYTDLAKTLQNPLKVRTLDLRYQKLTTLPKEIGQLQNLQRLDLSFN-SLTTLPKEIGQ 92
Query: 77 LTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
L NLQ LDLS N +LTTL + L NL+ LDL + T+
Sbjct: 93 LRNLQELDLSFN-SLTTLPKEVGQLENLQRLDLHQNRLATL 132
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ LQ LDL N T + L NL++LDL +TT+ + + +L+NL+ L
Sbjct: 251 IGQLQNLQWLDLHQNQLTTLPK----EIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQEL 306
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG 95
L N L + + L NL+VLDL NQ LTTL
Sbjct: 307 CLDENQ-LTTLPKEIEQLQNLRVLDLDNNQ-LTTLP 340
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 28 LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+ L NL+ LDLD +TT+ + + +L++L+ L L SN L + + L NLQVL L
Sbjct: 320 IEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNR-LSTLPKEIGQLQNLQVLGLI 378
Query: 87 GNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
NQ LTTL + L NL+ L L + +TT
Sbjct: 379 SNQ-LTTLPKEIGQLQNLQELCLDENQLTTF 408
>gi|388583059|gb|EIM23362.1| L domain-like protein [Wallemia sebi CBS 633.66]
Length = 283
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+ NL+NL+ L L I+ I GL L NLE L LS N SL+GL NLT L LD++
Sbjct: 148 NMDNLSNLRILSLQANRISDITGLDGLTNLEELYLSHNNL--SSLQGLDNLTQLNTLDIA 205
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
N+ T + +L NLK IT+++ I+
Sbjct: 206 HNKIETISNVKHLKNLKEFWANSNKITSLEEIE 238
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 64/124 (51%), Gaps = 14/124 (11%)
Query: 8 QVLDLSANYNITSGSLTRLG---------LANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
+++D+S N NI + L LG L L+NL++L L IT I + L NL
Sbjct: 99 KIVDIS-NLNIPTLELLELGGNRIRTIQNLDYLSNLRELWLGKNKITEIANMDNLSNLRI 157
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTIQG 117
L L +N + GL LTNL+ L LS N NL++L GL NL L TLD+ I TI
Sbjct: 158 LSLQANRI--SDITGLDGLTNLEELYLSHN-NLSSLQGLDNLTQLNTLDIAHNKIETISN 214
Query: 118 IQQF 121
++
Sbjct: 215 VKHL 218
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 64/137 (46%), Gaps = 17/137 (12%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLA---------------NLTNLKKLDLDGCGIT 45
L NL L++LDLS N + + +L L N+ L+ L+L G I
Sbjct: 63 LTNLSNLKILDLSFNLIRSIKDIEKLPLKELYLVQNKIVDISNLNIPTLELLELGGNRIR 122
Query: 46 TIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
TIQ L L NL L L N + + NL+NL++L L N+ GL L NL+ L
Sbjct: 123 TIQNLDYLSNLRELWLGKNKI--TEIANMDNLSNLRILSLQANRISDITGLDGLTNLEEL 180
Query: 106 DLRDCGITTIQGIQQFT 122
L ++++QG+ T
Sbjct: 181 YLSHNNLSSLQGLDNLT 197
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 26 LGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANL--TNLQVL 83
+ L NL+NLK LDL I +I K++E L L Y + + ++NL L++L
Sbjct: 61 VNLTNLSNLKILDLSFNLIRSI------KDIEKLPLKELYLVQNKIVDISNLNIPTLELL 114
Query: 84 DLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
+L GN+ T L L NL+ L L IT I + ++
Sbjct: 115 ELGGNRIRTIQNLDYLSNLRELWLGKNKITEIANMDNLSN 154
>gi|242802814|ref|XP_002484049.1| protein phosphatase PP1 regulatory subunit Sds22, putative
[Talaromyces stipitatus ATCC 10500]
gi|218717394|gb|EED16815.1| protein phosphatase PP1 regulatory subunit Sds22, putative
[Talaromyces stipitatus ATCC 10500]
Length = 314
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 7/120 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NLR L+ L L N IT L++L+NLK L + +T+I GL+ L +LE L
Sbjct: 154 LDNLRALEQLWLGKN-KITEMK----NLSSLSNLKILSIQSNRLTSITGLSDLHSLEELY 208
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+S N L GL + TNL+VLD S NQ G+++L ++ + + G+++ + +++
Sbjct: 209 ISHNAL--TDLSGLESNTNLRVLDFSNNQVSKLEGISHLTQIEEVWASNNGLSSFEEVER 266
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L +L+ L+L I IQGL L+ LE L L N ++ L++L+NL++L +
Sbjct: 131 GLDELVHLRNLELGANRIREIQGLDNLRALEQLWLGKNKI--TEMKNLSSLSNLKILSIQ 188
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ + GL++L +L+ L + +T + G++ T
Sbjct: 189 SNRLTSITGLSDLHSLEELYISHNALTDLSGLESNT 224
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL NL L++L L IT ++ L+ L NL+ L + SN S+ GL++L +L+ L +S
Sbjct: 153 GLDNLRALEQLWLGKNKITEMKNLSSLSNLKILSIQSNRL--TSITGLSDLHSLEELYIS 210
Query: 87 GNQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQQFT 122
N LT L GL + NL+ LD + ++ ++GI T
Sbjct: 211 HNA-LTDLSGLESNTNLRVLDFSNNQVSKLEGISHLT 246
>gi|392550131|ref|ZP_10297268.1| internalin A-like protein/ S-layer protein [Pseudoalteromonas
spongiae UST010723-006]
Length = 849
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 68/129 (52%), Gaps = 12/129 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLD------GCGITTIQGLAKLK 54
L +L LQVL S N N+ S LA +T+LK+L+L G GI I L L
Sbjct: 424 LIHLSKLQVLRASNNQNLDDLS----PLAEVTSLKELELSNLYYSYGRGIIDISPLKNLS 479
Query: 55 NLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITT 114
+LE LDL+SN +++ L+ LTNL+ L++S Q T + L +++ LD G+T+
Sbjct: 480 SLERLDLNSNRL--ENIDTLSYLTNLKELNVSSAQLDTLFNFSQLQSIEKLDASASGLTS 537
Query: 115 IQGIQQFTS 123
I + S
Sbjct: 538 IDELNTVVS 546
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G+ NL LK+LDL + I +++L LE L LS N +++ L NLTNL+ L L
Sbjct: 564 GIKNLVTLKRLDLSANDVEDISPISELTELEVLSLSENPI--KNIDALDNLTNLKTLSLR 621
Query: 87 GNQNLTTL-GLANLPNLKTLDLRD 109
G +T + L L LKTL+L D
Sbjct: 622 GLTEVTNIDSLFKLTALKTLELHD 645
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 1 LANLRYLQVLDLSA-NYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
LA + L+ L+LS Y+ G + L NL++L++LDL+ + I L+ L NL+ L
Sbjct: 447 LAEVTSLKELELSNLYYSYGRGIIDISPLKNLSSLERLDLNSNRLENIDTLSYLTNLKEL 506
Query: 60 DLSS-------NY-------YLHGSLEGLANLTN--------LQVLDLSGNQNLTTLGLA 97
++SS N+ L S GL ++ L+ ++L+GN G+
Sbjct: 507 NVSSAQLDTLFNFSQLQSIEKLDASASGLTSIDELNTVVSPYLEEINLTGNAIADISGIK 566
Query: 98 NLPNLKTLDLRDCGITTIQGIQQFT 122
NL LK LDL + I I + T
Sbjct: 567 NLVTLKRLDLSANDVEDISPISELT 591
>gi|39577522|gb|AAR28378.1| EIX receptor 2 [Solanum lycopersicum]
Length = 1021
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 6 YLQVLDLSANY---NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
YL+++DLS+N I GL +L NL + DL+G T ++G+ ++K LE+LDLS
Sbjct: 820 YLKIIDLSSNKLVGGIPKEIAEMRGLRSL-NLSRNDLNG---TVVEGIGQMKLLESLDLS 875
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQ 89
N +GL+NLT L VLDLS N
Sbjct: 876 RNQLSGMIPQGLSNLTFLSVLDLSNNH 902
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 17/125 (13%)
Query: 1 LANLRYLQVLDLSANYNITS------GSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLK 54
L L YL LDLS N S GSL RL NL++ D G Q L L+
Sbjct: 110 LLELEYLNFLDLSVNGFENSEIPRFIGSLKRLEYLNLSSS---DFSGEIPAQFQNLTSLR 166
Query: 55 NLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN----QNLTTLGLANLPNLKTLDLRDC 110
LDL +N + L L++L++L+ L L GN +N + +P+LK LDL C
Sbjct: 167 ---ILDLGNNNLIVKDLVWLSHLSSLEFLRLGGNDFQARNWFR-EITKVPSLKELDLSVC 222
Query: 111 GITTI 115
G++
Sbjct: 223 GLSKF 227
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI--TTIQGLAKLKNLEALDLSSN 64
L+ LDLS N G L L L +L++L L QG+ KL L D+SSN
Sbjct: 392 LEYLDLSDNQ--MRGPLPDLAL--FPSLRELHLGSNQFQGRIPQGIGKLSQLRIFDVSSN 447
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQ---NLTTLGLANLPNLKTLDL 107
L G E + L+NL+ D S N +T +NL +L LDL
Sbjct: 448 -RLEGLPESMGQLSNLERFDASYNVLKGTITESHFSNLSSLVDLDL 492
>gi|24216022|ref|NP_713503.1| hypothetical protein LA_3323 [Leptospira interrogans serovar Lai
str. 56601]
gi|386075103|ref|YP_005989422.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
str. IPAV]
gi|24197250|gb|AAN50521.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
str. 56601]
gi|353458894|gb|AER03439.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
str. IPAV]
Length = 311
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 71/137 (51%), Gaps = 24/137 (17%)
Query: 1 LANLRYLQVLDLSANYNIT-----------------SGSLTRLG--LANLTNLKKLDLDG 41
+ L+ LQ LDLS N T S LT L + L NL+ L+L
Sbjct: 137 IGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRN 196
Query: 42 CGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLAN 98
+TT+ + + +L+NL++LDL SN E + L NLQVLDL NQ LTTL G+
Sbjct: 197 NRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKE-IEQLKNLQVLDLGSNQ-LTTLPEGIGQ 254
Query: 99 LPNLKTLDLRDCGITTI 115
L NL+TLDL +TT+
Sbjct: 255 LKNLQTLDLDSNQLTTL 271
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ LQ L+L N T + L NLK LDL +TT + + +LKNL+ L
Sbjct: 183 IGQLKNLQTLNLRNNRLTTLSK----EIEQLQNLKSLDLRSNQLTTFPKEIEQLKNLQVL 238
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTL 105
DL SN L EG+ L NLQ LDL NQ LTTL + L NL+ L
Sbjct: 239 DLGSNQ-LTTLPEGIGQLKNLQTLDLDSNQ-LTTLPQEIGQLQNLQEL 284
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 68/140 (48%), Gaps = 30/140 (21%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ L+ L+LS N T + L L+ L LD +TT+ Q + +L+NL++L
Sbjct: 91 IGQLKNLKSLNLSYNQIKTIPK----EIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 146
Query: 60 DLSSN------------------YYLHGSLEGLAN----LTNLQVLDLSGNQNLTTLG-- 95
DLS+N Y + L L N L NLQ L+L N+ LTTL
Sbjct: 147 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNR-LTTLSKE 205
Query: 96 LANLPNLKTLDLRDCGITTI 115
+ L NLK+LDLR +TT
Sbjct: 206 IEQLQNLKSLDLRSNQLTTF 225
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ L+ LDL +N T + L NL+ LDL +TT+ +G+ +LKNL+ L
Sbjct: 206 IEQLQNLKSLDLRSNQLTTFPK----EIEQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTL 261
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
DL SN L + + L NLQ L L+ NQ
Sbjct: 262 DLDSN-QLTTLPQEIGQLQNLQELFLNNNQ 290
>gi|255564413|ref|XP_002523203.1| protein phosphatases pp1 regulatory subunit, putative [Ricinus
communis]
gi|223537610|gb|EEF39234.1| protein phosphatases pp1 regulatory subunit, putative [Ricinus
communis]
Length = 1582
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 47/86 (54%)
Query: 22 SLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQ 81
SL GL NL+ + L ++T++G+ LK ++ LDLS N + E L N LQ
Sbjct: 281 SLNASGLNLSPNLEFVYLRDNLLSTLEGIEILKRVKVLDLSFNEFKGPGFEPLENCKALQ 340
Query: 82 VLDLSGNQNLTTLGLANLPNLKTLDL 107
L L+GNQ + + L LPNL+ L +
Sbjct: 341 QLYLAGNQITSLISLPQLPNLEFLSV 366
>gi|326497243|dbj|BAK02206.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 922
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQG-LAKL-KNLE 57
LAN R L+ LD+SAN + SGS+ L L+++K+L L G TI G L++L +
Sbjct: 4 LANCRRLETLDMSAN-KLLSGSIPTF-LTELSSIKRLALAGNEFAGTIPGELSQLCGRIV 61
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
LDLSSN + G A ++L+VLDL GNQ
Sbjct: 62 ELDLSSNRLVGGLPASFAKCSSLEVLDLRGNQ 93
>gi|342321620|gb|EGU13553.1| Protein phosphatase 1 regulatory subunit 7 [Rhodotorula glutinis
ATCC 204091]
Length = 480
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 17 NITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
+I S LT++ GL LT L++L L G+T I+GL KL L LD+ +N + S E LA
Sbjct: 352 SIQSNRLTKIEGLDALTELEELYLSHNGLTKIEGLRKLTKLTTLDVGNNKIVEASAEELA 411
Query: 76 NLTNLQVLDLSGNQ--NLTTLGLANLPNLKTL 105
LT L+ + N+ + +L ++ PNL T+
Sbjct: 412 PLTELEEFWANNNELHAIPSLPPSSHPNLSTI 443
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 23 LTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQ 81
LT++ G+ + TNL L+ G I TI+ L NL +L L N +E L LT L+
Sbjct: 292 LTKIEGVKDRTNLTYLEYGGNRIRTIENLPISANLRSLFLGKNKIT--KIENLEGLTGLR 349
Query: 82 VLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
L + N+ GL L L+ L L G+T I+G+++ T
Sbjct: 350 TLSIQSNRLTKIEGLDALTELEELYLSHNGLTKIEGLRKLT 390
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 34/126 (26%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN----------------------- 64
L +L L++LDL + +++GL L +LE+LDLS N
Sbjct: 224 LRDLKELEELDLYDNSLKSVKGLEGLDSLESLDLSFNLLRSVAPFDDASPNSPYAFPRLN 283
Query: 65 --YYLHGSL---EGLANLTNLQVLDLSGNQNLTTLGLANLP---NLKTLDLRDCGITTIQ 116
Y + L EG+ + TNL L+ GN+ T + NLP NL++L L IT I+
Sbjct: 284 HLYLIQNKLTKIEGVKDRTNLTYLEYGGNRIRT---IENLPISANLRSLFLGKNKITKIE 340
Query: 117 GIQQFT 122
++ T
Sbjct: 341 NLEGLT 346
>gi|443497968|ref|NP_001263222.1| nischarin isoform 2 [Homo sapiens]
Length = 583
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY 66
L LDLS N S S + + ++ LDL G+ + L L NL LDLS N
Sbjct: 289 LTTLDLSHN----SISEIDESVKLIPKIEFLDLSHNGLLVVDNLQHLYNLVHLDLSYNKL 344
Query: 67 LHGSLEGL-ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
SLEGL L N++ L+L+GN + GL L +L LDLRD I ++ ++ S
Sbjct: 345 --SSLEGLHTKLGNIKTLNLAGNLLESLSGLHKLYSLVNLDLRDNRIEQMEEVRSIGS 400
>gi|424512952|emb|CCO66536.1| hypothetical protein Bathy09g00050 [Bathycoccus prasinos]
Length = 256
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +L L+ L + +T ++G+ L L LD+SSN + S++ LAN +++VL
Sbjct: 60 GLHSLRKLRSLHVAHNNLTNLKGIENLTELRFLDVSSNIGM-NSIDALANHGSIEVLLCG 118
Query: 87 GNQNLTTL-GLANLPNLKTLDLRDCGIT 113
N++L + L+ P L +D RDCGI+
Sbjct: 119 NNKSLRCIEALSTCPCLTAIDCRDCGIS 146
>gi|302762783|ref|XP_002964813.1| hypothetical protein SELMODRAFT_83115 [Selaginella moellendorffii]
gi|300167046|gb|EFJ33651.1| hypothetical protein SELMODRAFT_83115 [Selaginella moellendorffii]
Length = 1013
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 6/92 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI--TTIQGLAKLKNLEA 58
L R LQVLD S N +I +GS+ L +L+++ +L L G+ T L KL+NL A
Sbjct: 301 LGQARSLQVLDFSLNSDI-AGSIPA-SLGSLSDIVELSLFSMGLNGTIPSELGKLRNLSA 358
Query: 59 LDLSSNYYLHGSLEG-LANLTNLQVLDLSGNQ 89
L L SN + GS+ G + L++L+VL L GNQ
Sbjct: 359 LRLHSNS-ISGSIPGSFSELSSLKVLQLQGNQ 389
>gi|168179672|ref|ZP_02614336.1| putative internalin [Clostridium botulinum NCTC 2916]
gi|182669425|gb|EDT81401.1| putative internalin [Clostridium botulinum NCTC 2916]
Length = 331
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
++ L NL+ L++ C + + + LK L+ LD+S+N SLEG+ NLTNL+ +S
Sbjct: 141 ISTLKNLENLEIIDCKLNDVSIVKNLKQLKKLDISNNEI--SSLEGIQNLTNLKEFYISN 198
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ + +L L LD+ D I TI+ ++ S
Sbjct: 199 NKITNIKPMCSLLKLTNLDISDNKINTIKELKNIKS 234
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 10/121 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL L+++D N S+ + NL LKKLD+ I++++G+ L NL+
Sbjct: 144 LKNLENLEIIDCKLN----DVSIVK----NLKQLKKLDISNNEISSLEGIQNLTNLKEFY 195
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+S+N + ++ + +L L LD+S N+ T L N+ ++K L++ + I+ ++GIQ
Sbjct: 196 ISNNKITN--IKPMCSLLKLTNLDISDNKINTIKELKNIKSIKELNICNNNISDLEGIQD 253
Query: 121 F 121
Sbjct: 254 M 254
>gi|283779449|ref|YP_003370204.1| hypothetical protein Psta_1669 [Pirellula staleyi DSM 6068]
gi|283437902|gb|ADB16344.1| hypothetical protein Psta_1669 [Pirellula staleyi DSM 6068]
Length = 633
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 63/118 (53%), Gaps = 9/118 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT--IQGLAKLKNLEA 58
L + L+ LDLS +T L +L LT L +L L+G I++ I +A+L+NLE
Sbjct: 493 LGQFKRLKWLDLSLT-KVTDTGLEQLD--QLTQLNQLFLEGTAISSASIPAIARLRNLEE 549
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLA---NLPNLKTLDLRDCGIT 113
LDLS L +A L L+VL L G +T GLA +L NL+ LDLR ++
Sbjct: 550 LDLSKVNIADDDLAKIATLKQLKVLYLVGT-PVTDAGLAKLVSLQNLEMLDLRGTRVS 606
>gi|418702929|ref|ZP_13263821.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|410767473|gb|EKR38148.1| leucine rich repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
Length = 328
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 71/137 (51%), Gaps = 24/137 (17%)
Query: 1 LANLRYLQVLDLSANYNIT-----------------SGSLTRLG--LANLTNLKKLDLDG 41
+ L+ LQ LDLS N T S LT L + L NL+ L+L
Sbjct: 154 IGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRN 213
Query: 42 CGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLAN 98
+TT+ + + +L+NL++LDL SN E + L NLQVLDL NQ LTTL G+
Sbjct: 214 NRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKE-IGQLKNLQVLDLGSNQ-LTTLPEGIGQ 271
Query: 99 LPNLKTLDLRDCGITTI 115
L NL+TLDL +TT+
Sbjct: 272 LKNLQTLDLDSNQLTTL 288
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ LQ L+L N T + L NLK LDL +TT + + +LKNL+ L
Sbjct: 200 IGQLKNLQTLNLRNNRLTTLSK----EIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVL 255
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITT 114
DL SN L EG+ L NLQ LDL NQ LTTL + L NL+ L L + +++
Sbjct: 256 DLGSNQ-LTTLPEGIGQLKNLQTLDLDSNQ-LTTLPQEIGQLQNLQELFLNNNQLSS 310
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 68/140 (48%), Gaps = 30/140 (21%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ L+ L+LS N T + L L+ L LD +TT+ Q + +L+NL++L
Sbjct: 108 IGQLKNLKSLNLSYNQIKTIPK----KIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 163
Query: 60 DLSSN------------------YYLHGSLEGLAN----LTNLQVLDLSGNQNLTTLG-- 95
DLS+N Y + L L N L NLQ L+L N+ LTTL
Sbjct: 164 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNR-LTTLSKE 222
Query: 96 LANLPNLKTLDLRDCGITTI 115
+ L NLK+LDLR +TT
Sbjct: 223 IEQLQNLKSLDLRSNQLTTF 242
>gi|307610590|emb|CBX00178.1| Dot/Icm T4SS effector [Legionella pneumophila 130b]
Length = 553
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 59/111 (53%), Gaps = 15/111 (13%)
Query: 11 DLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT------IQGLAKLKNLEALDLSSN 64
+LSA+Y + S L+R N LKKL L CG+T + ++LKNL +L N
Sbjct: 133 ELSASYVLFS--LSR----NAAALKKLSLRNCGVTDANLEYLTRPESRLKNLTHFNLRRN 186
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTTLG---LANLPNLKTLDLRDCGI 112
H ++ +A+L +L +DLS N + G LA L L+TL L +CGI
Sbjct: 187 NITHQGVDSIAHLQSLTTIDLSQNTGIGDEGVSRLAPLKQLRTLYLDNCGI 237
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT--IQGLAKLKNLEA 58
+A+L+ L +DLS N I ++R LA L L+ L LD CGI I+ +AK+ NL+
Sbjct: 196 IAHLQSLTTIDLSQNTGIGDEGVSR--LAPLKQLRTLYLDNCGIGAEGIKAIAKM-NLQT 252
Query: 59 LDLSSN 64
+DLS N
Sbjct: 253 VDLSFN 258
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%), Gaps = 16/117 (13%)
Query: 7 LQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGIT---TIQGLAKLKNLEALDL 61
L LDLS N T+ L+ L L N+ +K L LD CG+ T++ L KL +++ L L
Sbjct: 51 LSELDLS-NTRFTNQELSDLVTALNNIPGIKSLRLDSCGLKDSDTVE-LFKLTHIKKLSL 108
Query: 62 SSNY-----YLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
SNY + LE L N + LS + L +L N LK L LR+CG+T
Sbjct: 109 KSNYLKNRPMFNSMLEALYLDYNTE---LSASYVLFSLS-RNAAALKKLSLRNCGVT 161
>gi|308044417|ref|NP_001183765.1| hypothetical protein [Zea mays]
gi|238014428|gb|ACR38249.1| unknown [Zea mays]
gi|413949466|gb|AFW82115.1| hypothetical protein ZEAMMB73_510951 [Zea mays]
Length = 547
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 31/115 (26%)
Query: 32 TNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANL-TNLQVLDLSGN-- 88
++L LDL C ++ + L K+KNLE LDLS N G++E +A + TNLQ L L
Sbjct: 228 SSLIHLDLSSCKLSNLSFLEKMKNLEHLDLSYNIITDGAIEHIAKIGTNLQYLSLKNTGI 287
Query: 89 ------------QNLTTLGLAN-------------LPNLKTLDLRDCGITTIQGI 118
NLT+L LAN +P L+T+DL T+I+G
Sbjct: 288 TSQALCILAGTVPNLTSLSLANTKIDDSALAYIGMIPLLRTIDLSQ---TSIKGF 339
>gi|51535515|dbj|BAD37434.1| putative NBS-LRR disease resistance protein [Oryza sativa Japonica
Group]
Length = 1451
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
Query: 5 RYLQVLDLSA-NYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSS 63
++L++LD SA N S++ L L LK L++ G T + L+KL +L+AL LS+
Sbjct: 564 KFLRILDFSACTINELPDSISHLSL-----LKYLNVSGLSGTLPKSLSKLHHLQALTLST 618
Query: 64 NYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGITTIQGIQQF 121
N L + LQ LDL G L L G+ L+ L+L DC T+++ + F
Sbjct: 619 NIDLVELPSYICEFLKLQYLDLHGCSKLKKLPDGIHKHKELQHLNLSDC--TSLESLPLF 676
Query: 122 TS 123
+S
Sbjct: 677 SS 678
>gi|405965268|gb|EKC30654.1| Nischarin [Crassostrea gigas]
Length = 1211
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
Query: 27 GLANLTNL----KKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL-ANLTNLQ 81
GL N+ L + LDL +T +Q L L L LDLS+N LE L + NL+
Sbjct: 92 GLTNIRQLIPRVEVLDLSHNRLTGVQHLNWLSQLTQLDLSNNQI--KDLENLHTKIGNLK 149
Query: 82 VLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
+L+L+GN+ + GL+ L +L+TLD+R+ + ++ +Q
Sbjct: 150 ILNLAGNKMDSLKGLSKLFSLETLDVRNNNLAQVEEVQ 187
>gi|355748025|gb|EHH52522.1| hypothetical protein EGM_12976 [Macaca fascicularis]
Length = 826
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Query: 8 QVLDLSANYNITSGSLTR------LGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDL 61
++ DLSA + +T L GL NL L L I TI GL KL ++ L L
Sbjct: 208 EICDLSAYHALTKLILDGNEIEEISGLEKCNNLTHLSLANNKIMTINGLNKLP-IKILSL 266
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
S+N ++ GL +L LQ LDLS NQ + GL N L+ +DL D I ++ I+
Sbjct: 267 SNNQI--ETITGLEDLKALQNLDLSHNQISSLQGLENHDLLEVIDLEDNKIAELREIE 322
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 40/104 (38%), Positives = 53/104 (50%), Gaps = 11/104 (10%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY 66
L L L+ N +T L +L +K L L I TI GL LK L+ LDLS N
Sbjct: 240 LTHLSLANNKIMTINGLNKL------PIKILSLSNNQIETITGLEDLKALQNLDLSHNQI 293
Query: 67 LHGSLEGLANLTNLQVLDLSGNQ--NLTTLG-LANLPNLKTLDL 107
SL+GL N L+V+DL N+ L + + NLP L+ L+L
Sbjct: 294 --SSLQGLENHDLLEVIDLEDNKIAELREIEYIKNLPILRVLNL 335
>gi|347548020|ref|YP_004854348.1| internalin protein peptidoglycan bound protein [Listeria ivanovii
subsp. ivanovii PAM 55]
gi|346981091|emb|CBW85018.1| Internalin protein, putative peptidoglycan bound protein (LPXTG
motif) [Listeria ivanovii subsp. ivanovii PAM 55]
Length = 590
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
Query: 14 ANYNITSGSLTRLGLANLTNLKKLDLDGCGITT--IQGLAKLKNLEALDLSSNYYLHGSL 71
AN +T SL LA+L+ L + L G IT+ I L L+ L L++S + +L
Sbjct: 101 ANTQVTDFSL----LASLSKLTNISLAGSNITSNSIPDLNGLQELTNLNISPANLTNDAL 156
Query: 72 EGLANLTNLQVLDLSGNQNLT-TLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
+ + NL L+L N +LT + L +LPNL TL ++ CGI +GI+ F S
Sbjct: 157 TKINKIPNLTYLNLDSNHSLTDIMPLKSLPNLVTLFVQFCGINDYRGIEDFPS 209
>gi|147783253|emb|CAN62110.1| hypothetical protein VITISV_038734 [Vitis vinifera]
Length = 1625
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 37/96 (38%), Positives = 60/96 (62%), Gaps = 7/96 (7%)
Query: 22 SLTRLGLANLTNLKKLDLDGCGIT---TIQGLAKLKNLEALDLSSNYYLHGSLE-GLANL 77
SLT++GL +LT+LK L ++ C + T GL L +LE+L +++ L + GL +L
Sbjct: 1279 SLTKVGLQHLTSLKTLGINNCRMLQSLTEVGLQHLTSLESLWINNCPMLQSLTKVGLQHL 1338
Query: 78 TNLQVLDLSGN---QNLTTLGLANLPNLKTLDLRDC 110
T+L+ L ++ Q+LT +GL +L +LKTL + DC
Sbjct: 1339 TSLESLWINKCXMLQSLTKVGLQHLTSLKTLRIYDC 1374
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 10/112 (8%)
Query: 22 SLTRLGLANLTNLKKLDLDGC------GITTIQGLAKLKNLEALDLSSNYYL-HGSLEGL 74
SL GL LT+L KL ++ C + Q L LK LE S L L+ L
Sbjct: 1204 SLDSGGLQQLTSLLKLKINHCPELQFSTGSVFQHLISLKRLEIYGCSRLQSLTEAGLQHL 1263
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGI---TTIQGIQQFTS 123
+L L++ + Q+LT +GL +L +LKTL + +C + T G+Q TS
Sbjct: 1264 TSLEKLEIANCPMLQSLTKVGLQHLTSLKTLGINNCRMLQSLTEVGLQHLTS 1315
>gi|77549334|gb|ABA92131.1| Leucine Rich Repeat family protein [Oryza sativa Japonica Group]
Length = 767
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 6/119 (5%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNL 56
LA+L +L+ LDLSA I S S LG ++TNL+ LDL GC ++ L L L
Sbjct: 28 LASLEHLEYLDLSALVLPGINSSSPKFLG--SMTNLRYLDLSGCFLSGSVSPWLGNLSKL 85
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
E LDLS + L NLT L+ LDL Q++ + ++ + +L++L+ D + +
Sbjct: 86 EYLDLSFSTLSGRVPPELGNLTRLKHLDLGNMQHMYSADISWITHLRSLEYLDMSLVNL 144
>gi|449137184|ref|ZP_21772515.1| internalin C2 [Rhodopirellula europaea 6C]
gi|448884261|gb|EMB14763.1| internalin C2 [Rhodopirellula europaea 6C]
Length = 372
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 9/119 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ANL+ LQ + L AN I S +A+L ++ LD+ G +T++ LAK+ NL L
Sbjct: 180 IANLKRLQSVTL-ANNKIASLD----PVADLVAMQLLDVSGNELTSLDPLAKMSNLRTLY 234
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTIQGI 118
++ N SL+ LA LT + LD++GN+ LT+L ++ L L TL++ D IT+++ +
Sbjct: 235 VADNKL--TSLDPLAGLTKIWSLDVAGNE-LTSLDPVSKLGWLTTLEISDNKITSLEPL 290
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL + +L +DL I + +A LK L+++ L++N SL+ +A+L +Q+LD+S
Sbjct: 157 GLQHCKSLMLIDLADNKIEDLTPIANLKRLQSVTLANNKI--ASLDPVADLVAMQLLDVS 214
Query: 87 GNQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQQFT 122
GN+ LT+L LA + NL+TL + D +T++ + T
Sbjct: 215 GNE-LTSLDPLAKMSNLRTLYVADNKLTSLDPLAGLT 250
>gi|297790452|ref|XP_002863116.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308940|gb|EFH39375.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1090
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 3 NLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLD--GCGITTIQGLAKLKNLEA 58
N +L LD+S + + G + NL NLK+LDL C + + L NL+
Sbjct: 634 NTEFLVELDMSYSKLEKLWEGIKLPSSIGNLINLKELDLSSLSCLVELPSSIGNLINLKE 693
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDC 110
LDLSS L + N TNL+VL+L +L L + NL L+TL LR C
Sbjct: 694 LDLSSLSCLVELPFSIGNATNLEVLNLRQCSSLVKLPFSIGNLQKLQTLTLRGC 747
>gi|222615715|gb|EEE51847.1| hypothetical protein OsJ_33351 [Oryza sativa Japonica Group]
Length = 801
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 6/119 (5%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNL 56
LA+L +L+ LDLSA I S S LG ++TNL+ LDL GC ++ L L L
Sbjct: 62 LASLEHLEYLDLSALVLPGINSSSPKFLG--SMTNLRYLDLSGCFLSGSVSPWLGNLSKL 119
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
E LDLS + L NLT L+ LDL Q++ + ++ + +L++L+ D + +
Sbjct: 120 EYLDLSFSTLSGRVPPELGNLTRLKHLDLGNMQHMYSADISWITHLRSLEYLDMSLVNL 178
>gi|357610455|gb|EHJ66988.1| putative tartan [Danaus plexippus]
Length = 471
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 7/117 (5%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI--QGLAKLKNLEALD 60
+L ++ LDLS N +T + T L++L+ L L I I L L +LE LD
Sbjct: 45 DLSVIETLDLSNNMLVTFEADT---FEPLSSLRTLSLRNNSILEIPSANLIFLVHLEFLD 101
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGN--QNLTTLGLANLPNLKTLDLRDCGITTI 115
LS N G+ L L+ L+L+ N +++ LG+ NLP+L+ LDL D +TTI
Sbjct: 102 LSENLIQVVEKHGIPYLKELKHLNLNSNIIESIDQLGMHNLPSLRHLDLSDNNLTTI 158
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQ--GLAKLKNLEALDL 61
L +L+ LDLS N + + G+ L LK L+L+ I +I G+ L +L LDL
Sbjct: 94 LVHLEFLDLSENL---IQVVEKHGIPYLKELKHLNLNSNIIESIDQLGMHNLPSLRHLDL 150
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSGN--QNLTTLGLANLPNLKTLDL 107
S N L+ LTNL L LSGN QN+++L +L +LK L L
Sbjct: 151 SDNNLTTIPTSALSKLTNLSHLYLSGNFFQNISSLSFQSLFHLKHLHL 198
>gi|455791548|gb|EMF43355.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
str. TE 1992]
Length = 371
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 66/112 (58%), Gaps = 9/112 (8%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNY 65
++VLDLS +L + + L NL++L+LD +TTI + + +LKNL+ L+L +N
Sbjct: 50 VRVLDLSEQ---KLKALPK-KIGQLKNLQELNLDANQLTTILKEIEQLKNLQELNLDANQ 105
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
L L+ + L NLQVLD NQ +TTL + L NLK L L + +TT+
Sbjct: 106 -LTTILKEIEQLKNLQVLDFGSNQ-ITTLSQEIGQLQNLKVLFLNNNQLTTL 155
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 34/142 (23%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITTI-QGLAKLKNLE 57
+ L+ LQ L+L AN LT + + L NL++L+LD +TTI + + +LKNL+
Sbjct: 67 IGQLKNLQELNLDAN------QLTTILKEIEQLKNLQELNLDANQLTTILKEIEQLKNLQ 120
Query: 58 ALDLSSNYYLH-----GSLEGLA-----------------NLTNLQVLDLSGNQNLTTLG 95
LD SN G L+ L L NLQ L+L NQ L TL
Sbjct: 121 VLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQ-LITLP 179
Query: 96 --LANLPNLKTLDLRDCGITTI 115
+A L NL+ L L + + T+
Sbjct: 180 KEIAQLKNLQELYLSENQLMTL 201
>gi|451820472|ref|YP_007456673.1| hypothetical protein Cspa_c36590 [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451786451|gb|AGF57419.1| hypothetical protein Cspa_c36590 [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 356
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 5 RYLQVLD-LSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSS 63
+Y++ +D + Y S T L NLK LDL I I GL L NL LDLS
Sbjct: 190 KYIKYVDAIEKLYLYNSKIRTLNSLEGFINLKTLDLSANSIADITGLKYLTNLVELDLSI 249
Query: 64 NYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
N + +++L L+ L L N L NL NLK L L +CGI I ++
Sbjct: 250 NKI--SDISFISHLEKLEKLSLDSNLIHDISALENLKNLKELRLMECGIKDISALK 303
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G+ NLKKL+L GI I L LK LE LDLS+NY + + +L ++ L+LS
Sbjct: 58 GIQYCENLKKLELIEIGIRDISLLKNLKKLEYLDLSNNYI--KDINEIRDLNLIEYLNLS 115
Query: 87 GNQNLTTLGLANLPNLKTLDL 107
N + LPNLK L+L
Sbjct: 116 YNPIENVDVIEKLPNLKHLNL 136
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L NL NLK+L L CGI I L L NLE L L N + + NL+ LQVL +
Sbjct: 279 ALENLKNLKELRLMECGIKDISALKYLVNLEKLYLDYNKI--TDISSIENLSKLQVLWID 336
Query: 87 GNQ 89
GN+
Sbjct: 337 GNK 339
>gi|326532066|dbj|BAK01409.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1215
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQG-LAKL-KNLE 57
LAN R L+ LD+SAN + SGS+ L L+++K+L L G TI G L++L +
Sbjct: 297 LANCRRLETLDMSAN-KLLSGSIPTF-LTELSSIKRLALAGNEFAGTIPGELSQLCGRIV 354
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
LDLSSN + G A ++L+VLDL GNQ
Sbjct: 355 ELDLSSNRLVGGLPASFAKCSSLEVLDLRGNQ 386
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 2 ANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI---QGLAKLKNLEA 58
ANL +L + A N T G ++ NL LD G+++ GLA + LE
Sbjct: 251 ANLTHLSI----AGNNFT-GDVSGYNFGGCGNLTVLDWSNNGLSSTGLPPGLANCRRLET 305
Query: 59 LDLSSNYYLHGSLEG-LANLTNLQVLDLSGNQNLTTL 94
LD+S+N L GS+ L L++++ L L+GN+ T+
Sbjct: 306 LDMSANKLLSGSIPTFLTELSSIKRLALAGNEFAGTI 342
>gi|326487768|dbj|BAK05556.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1215
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQG-LAKL-KNLE 57
LAN R L+ LD+SAN + SGS+ L L+++K+L L G TI G L++L +
Sbjct: 297 LANCRRLETLDMSAN-KLLSGSIPTF-LTELSSIKRLALAGNEFAGTIPGELSQLCGRIV 354
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
LDLSSN + G A ++L+VLDL GNQ
Sbjct: 355 ELDLSSNRLVGGLPASFAKCSSLEVLDLRGNQ 386
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 2 ANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI---QGLAKLKNLEA 58
ANL +L + A N T G ++ NL LD G+++ GLA + LE
Sbjct: 251 ANLTHLSI----AGNNFT-GDVSGYNFGGCGNLTVLDWSNNGLSSTGLPPGLANCRRLET 305
Query: 59 LDLSSNYYLHGSLEG-LANLTNLQVLDLSGNQNLTTL 94
LD+S+N L GS+ L L++++ L L+GN+ T+
Sbjct: 306 LDMSANKLLSGSIPTFLTELSSIKRLALAGNEFAGTI 342
>gi|356561582|ref|XP_003549060.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
FLS2-like [Glycine max]
Length = 1181
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 14/133 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI--QGLAKLKNLEA 58
L L+YL LDLS+NY + + + LG +L +L+ LDL G + L L NL+
Sbjct: 103 LLELKYLNRLDLSSNYFVLTPIPSFLG--SLESLRYLDLSLSGFMGLIPHQLGNLSNLQH 160
Query: 59 LDLSSNYYLH-GSLEGLANLTNLQVLDLSGNQNLTTLG-----LANLPNLKTLDLRDCGI 112
L+L NY L +L ++ L++L+ LDLSG+ +L G L+ LP+L L L C I
Sbjct: 161 LNLGYNYALQIDNLNWISRLSSLEYLDLSGS-DLHKQGNWLQVLSALPSLSELHLESCQI 219
Query: 113 TTI---QGIQQFT 122
+ +G FT
Sbjct: 220 DNLGPPKGKANFT 232
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI----TTIQGLAKLKNL 56
L NL LQ L+L NY + +L ++ L++L+ LDL G + +Q L+ L +L
Sbjct: 152 LGNLSNLQHLNLGYNYALQIDNLN--WISRLSSLEYLDLSGSDLHKQGNWLQVLSALPSL 209
Query: 57 EALDLSSNYYLH-GSLEGLANLTNLQVLDLSGN 88
L L S + G +G AN T+LQVLDLS N
Sbjct: 210 SELHLESCQIDNLGPPKGKANFTHLQVLDLSIN 242
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 29 ANLTNLKKLDLDGCGITTI--QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
++L N+K LDL ++ L +LK+LE L+LS+N + S ANL++L+ L+L+
Sbjct: 527 SSLQNIKNLDLQNNQLSGPLPDSLGQLKHLEVLNLSNNTFTCPSPSPFANLSSLRTLNLA 586
Query: 87 GNQ 89
N+
Sbjct: 587 HNR 589
>gi|326525236|dbj|BAK07888.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1215
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQG-LAKL-KNLE 57
LAN R L+ LD+SAN + SGS+ L L+++K+L L G TI G L++L +
Sbjct: 297 LANCRRLETLDMSAN-KLLSGSIPTF-LTELSSIKRLALAGNEFAGTIPGELSQLCGRIV 354
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
LDLSSN + G A ++L+VLDL GNQ
Sbjct: 355 ELDLSSNRLVGGLPASFAKCSSLEVLDLRGNQ 386
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 2 ANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI---QGLAKLKNLEA 58
ANL +L + A N T G ++ NL LD G+++ GLA + LE
Sbjct: 251 ANLTHLSI----AGNNFT-GDVSGYNFGGCGNLTVLDWSNNGLSSTGLPPGLANCRRLET 305
Query: 59 LDLSSNYYLHGSLEG-LANLTNLQVLDLSGNQNLTTL 94
LD+S+N L GS+ L L++++ L L+GN+ T+
Sbjct: 306 LDMSANKLLSGSIPTFLTELSSIKRLALAGNEFAGTI 342
>gi|392868369|gb|EAS34147.2| protein phosphatase PP1 regulatory subunit sds22 [Coccidioides
immitis RS]
Length = 344
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L +LT+L++L L IT I+ ++ L NL+ L L SN SL GL+ LTNL+ L +S
Sbjct: 184 LDDLTSLEELWLGKNKITEIKNISHLSNLKILSLPSNRL--TSLSGLSGLTNLEELYVSH 241
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N GL +L NL LD+ + I+T++ I +
Sbjct: 242 NAITHISGLESLNNLHVLDISNNQISTLENISHLS 276
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
+++L+NLK L L +T++ GL+ L NLE L +S N H S GL +L NL VLD+S
Sbjct: 206 ISHLSNLKILSLPSNRLTSLSGLSGLTNLEELYVSHNAITHIS--GLESLNNLHVLDISN 263
Query: 88 NQNLTTLGLANLPNLKTL 105
NQ T +++L +++ L
Sbjct: 264 NQISTLENISHLSHIEEL 281
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL LT L+ L+L I I+ L L +LE L L N ++ +++L+NL++L L
Sbjct: 161 GLEGLTKLRNLELGANRIREIENLDDLTSLEELWLGKNKI--TEIKNISHLSNLKILSLP 218
Query: 87 GNQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQ 119
N+ LT+L GL+ L NL+ L + IT I G++
Sbjct: 219 SNR-LTSLSGLSGLTNLEELYVSHNAITHISGLE 251
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 7/89 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+++L L++L L +N +TS S GL+ LTNL++L + IT I GL L NL LD
Sbjct: 206 ISHLSNLKILSLPSN-RLTSLS----GLSGLTNLEELYVSHNAITHISGLESLNNLHVLD 260
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
+S+N +LE +++L++++ L S N+
Sbjct: 261 ISNNQI--STLENISHLSHIEELWASNNK 287
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL LTNL LDL I I+ L+KL L L N +EGL LT L+ L+L
Sbjct: 117 GLDQLTNLTSLDLSFNNIKHIKNLSKLVQLTDLYFVQNRI--QKIEGLEGLTKLRNLELG 174
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ L +L +L+ L L IT I+ I +
Sbjct: 175 ANRIREIENLDDLTSLEELWLGKNKITEIKNISHLS 210
>gi|421118974|ref|ZP_15579301.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
gi|410348314|gb|EKO99140.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
Length = 379
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 7/103 (6%)
Query: 18 ITSGSLTRLG--LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGL 74
+ S LT L + L NL+ L+L +TT+ + + +L+NL++LDL SN E +
Sbjct: 239 LVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKE-I 297
Query: 75 ANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGITTI 115
L NLQVLDL NQ LTTL G+ L NL+TLDL +TT+
Sbjct: 298 EQLKNLQVLDLGSNQ-LTTLPEGIGQLKNLQTLDLDSNQLTTL 339
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ LQ L+L N T + L NLK LDL +TT + + +LKNL+ L
Sbjct: 251 IGQLKNLQTLNLRNNRLTTLSK----EIEQLQNLKSLDLRSNQLTTFPKEIEQLKNLQVL 306
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITT 114
DL SN L EG+ L NLQ LDL NQ LTTL + L NL+ L L + +++
Sbjct: 307 DLGSNQ-LTTLPEGIGQLKNLQTLDLDSNQ-LTTLPQEIGQLQNLQELFLNNNQLSS 361
>gi|395528316|ref|XP_003766276.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 [Sarcophilus
harrisii]
Length = 326
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L L +L++LDL I I+ L LK+LE LD+S N L S+EG+ LT L+ L L
Sbjct: 81 NLEELQSLRELDLYDNQIRKIENLEALKDLETLDISFN--LLRSIEGIDQLTQLKKLFLV 138
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ L+NL LK L+L I I+ I T+
Sbjct: 139 NNKISKIENLSNLQQLKMLELGSNRIRAIENIDSLTN 175
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L+NL LK L+L I I+ + L NL++L L N L+ L LTNL VL +
Sbjct: 147 NLSNLQQLKMLELGSNRIRAIENIDSLTNLDSLFLGKNKI--TKLQNLDALTNLTVLSMQ 204
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
N+ GL NL NL+ L L GI I+G++
Sbjct: 205 SNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLE 237
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL+ L++L+L +N I + + +LTNL L L IT +Q L L NL L
Sbjct: 148 LSNLQQLKMLELGSN-RIRAIE----NIDSLTNLDSLFLGKNKITKLQNLDALTNLTVLS 202
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
+ SN +EGL NL NL+ L LS N GL N L LD+ I I+ +
Sbjct: 203 MQSNRL--TKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENV 258
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 37 LDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGL 96
+DL+ I I+G LK ++ L L N L +E L L +L+ LDL NQ L
Sbjct: 47 IDLNHYRIGKIEGFEVLKKVKTLCLRQN--LIKCIENLEELQSLRELDLYDNQIRKIENL 104
Query: 97 ANLPNLKTLDLRDCGITTIQGIQQFTS 123
L +L+TLD+ + +I+GI Q T
Sbjct: 105 EALKDLETLDISFNLLRSIEGIDQLTQ 131
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 58/135 (42%), Gaps = 20/135 (14%)
Query: 7 LQVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
LQ LD N + S RL GL NL NL++L L GI I+GL L LD++
Sbjct: 189 LQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIA 248
Query: 63 SNYYLHGSLEGLANLTNLQVL--------------DLSGNQNLTTLGLANLPNLKTLDLR 108
SN +E +++L LQ +L G +NL T+ L P K R
Sbjct: 249 SNRI--KKIENVSHLIELQEFWMNDNLIESWSDLDELKGAKNLETVYLERNPLQKDPQYR 306
Query: 109 DCGITTIQGIQQFTS 123
+ + I+Q +
Sbjct: 307 RKIMLALPTIRQIDA 321
>gi|302811761|ref|XP_002987569.1| hypothetical protein SELMODRAFT_183219 [Selaginella moellendorffii]
gi|300144723|gb|EFJ11405.1| hypothetical protein SELMODRAFT_183219 [Selaginella moellendorffii]
Length = 317
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ N++ L+ L L N + + L LT++ KL L +T++ G + LE L
Sbjct: 162 IENMKRLEELWLGRNR------IRTVNLCGLTSIVKLSLQSNRLTSMLGFEECLALEELY 215
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
LS N +EGLA L NL+VLD+S N+ + + NL L+ L L D I ++ GI+
Sbjct: 216 LSHNGI--SKMEGLATLVNLRVLDVSSNRLTSIADVENLEKLEDLWLNDNNIPSLDGIET 273
Query: 121 FTS 123
S
Sbjct: 274 ILS 276
>gi|402887001|ref|XP_003906896.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 1
[Papio anubis]
Length = 1693
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +L NL++L LD + + +GL + LD S N+ +EG+ N LQ+L L
Sbjct: 963 GLESLKNLQQLILDHNQLISTKGLCDTPTIVYLDCSHNHLT--DVEGIENCGLLQILKLQ 1020
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
GN L NL L+ L L D I+T++ F+SY
Sbjct: 1021 GNYLSELPSLENLVLLRELHLDDNSISTVEA---FSSY 1055
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL--ANLTNLQVLDL 85
LA TNL+ L L CG+T++ L+ K L+ +D N +E + NL NL V+ L
Sbjct: 813 LAECTNLQFLSLQRCGLTSLHSLSNCKKLKYIDAQEN-----RIEAIDCENLENLCVVLL 867
Query: 86 SGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ NQ + GL N++ L+L IT I
Sbjct: 868 NKNQLTSLHGLDGCTNIQCLELSHNKITRI 897
>gi|325303822|tpg|DAA34585.1| TPA_exp: mapmodulin-like protein [Amblyomma variegatum]
Length = 262
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
NL+ L L G+T+++G KL NL+ L+LS N + G L L L L+LSGN
Sbjct: 35 EEFVNLETLSLINVGLTSLKGFPKLPNLKKLELSDN-RISGGLNLLHGSPKLTHLNLSGN 93
Query: 89 --QNLTTL-GLANLPNLKTLDLRDCGITTIQ 116
+ L TL L NLK LDL +C +T+I+
Sbjct: 94 KIKGLETLDPLKEFKNLKNLDLFNCEVTSIE 124
>gi|255524523|ref|ZP_05391478.1| leucine-rich repeat protein [Clostridium carboxidivorans P7]
gi|296186022|ref|ZP_06854427.1| leucine Rich repeat protein [Clostridium carboxidivorans P7]
gi|255511819|gb|EET88104.1| leucine-rich repeat protein [Clostridium carboxidivorans P7]
gi|296049290|gb|EFG88719.1| leucine Rich repeat protein [Clostridium carboxidivorans P7]
Length = 683
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G+ NLT+L+ LDL ++ I L+ L NLE L+LS N + + L L+ L+ L+L+
Sbjct: 555 GIENLTSLQTLDLGNNQVSDISVLSSLTNLETLNLSYNEF--SDISKLKGLSKLETLNLN 612
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
N+ + L NLK+L+L +C I+ I ++
Sbjct: 613 SNEIGDISAIQTLNNLKSLNLSNCKISNINPLK 645
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G+ NLTNL+ LDL I+ I L L L+ L L+ N + L NLT+L+ LDL
Sbjct: 375 GIENLTNLQFLDLSQSKISDISELKNLTKLQTLLLNDNEI--SDISPLQNLTDLKQLDLE 432
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ L L +L L L++ IT I ++ T
Sbjct: 433 ENRISDITPLQYLSDLNELYLKNNRITNISKLEWLT 468
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 43 GITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNL 102
I I G+ L NL+ LDLS + + L NLT LQ L L+ N+ L NL +L
Sbjct: 369 NIQDISGIENLTNLQFLDLSQSKI--SDISELKNLTKLQTLLLNDNEISDISPLQNLTDL 426
Query: 103 KTLDLRDCGITTIQGIQ 119
K LDL + I+ I +Q
Sbjct: 427 KQLDLEENRISDITPLQ 443
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%)
Query: 71 LEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
+ G+ NLTNLQ LDLS ++ L NL L+TL L D I+ I +Q T
Sbjct: 373 ISGIENLTNLQFLDLSQSKISDISELKNLTKLQTLLLNDNEISDISPLQNLT 424
>gi|402864879|ref|XP_003896669.1| PREDICTED: leucine-rich repeat and guanylate kinase
domain-containing protein [Papio anubis]
Length = 831
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Query: 8 QVLDLSANYNITSGSLTR------LGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDL 61
++ DLSA + +T L GL NL L L I TI GL KL ++ L L
Sbjct: 208 EICDLSAYHALTKLILDGNEIEEISGLEKCNNLTHLSLANNKIMTINGLNKLP-IKILSL 266
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
S+N ++ GL +L LQ LDLS NQ + GL N L+ +DL D I ++ I+
Sbjct: 267 SNNQI--ETITGLEDLKALQNLDLSHNQISSLQGLENHDLLEVIDLEDNKIAELREIE 322
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 40/104 (38%), Positives = 53/104 (50%), Gaps = 11/104 (10%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY 66
L L L+ N +T L +L +K L L I TI GL LK L+ LDLS N
Sbjct: 240 LTHLSLANNKIMTINGLNKL------PIKILSLSNNQIETITGLEDLKALQNLDLSHNQI 293
Query: 67 LHGSLEGLANLTNLQVLDLSGNQ--NLTTLG-LANLPNLKTLDL 107
SL+GL N L+V+DL N+ L + + NLP L+ L+L
Sbjct: 294 --SSLQGLENHDLLEVIDLEDNKIAELREIEYIKNLPILRVLNL 335
>gi|418680694|ref|ZP_13241938.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|400327638|gb|EJO79883.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
Length = 351
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 71/137 (51%), Gaps = 24/137 (17%)
Query: 1 LANLRYLQVLDLSANYNIT-----------------SGSLTRLG--LANLTNLKKLDLDG 41
+ L+ LQ LDLS N T S LT L + L NL+ L+L
Sbjct: 177 IGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRN 236
Query: 42 CGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLAN 98
+TT+ + + +L+NL++LDL SN E + L NLQVLDL NQ LTTL G+
Sbjct: 237 NRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKE-IGQLKNLQVLDLGSNQ-LTTLPEGIGQ 294
Query: 99 LPNLKTLDLRDCGITTI 115
L NL+TLDL +TT+
Sbjct: 295 LKNLQTLDLDSNQLTTL 311
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ LQ L+L N T + L NLK LDL +TT + + +LKNL+ L
Sbjct: 223 IGQLKNLQTLNLRNNRLTTLSK----EIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVL 278
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITT 114
DL SN L EG+ L NLQ LDL NQ LTTL + L NL+ L L + +++
Sbjct: 279 DLGSNQ-LTTLPEGIGQLKNLQTLDLDSNQ-LTTLPQEIGQLQNLQELFLNNNQLSS 333
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 68/140 (48%), Gaps = 30/140 (21%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ L+ L+LS N T + L L+ L LD +TT+ Q + +L+NL++L
Sbjct: 131 IGQLKNLKSLNLSYNQIKTIPK----KIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 186
Query: 60 DLSSN------------------YYLHGSLEGLAN----LTNLQVLDLSGNQNLTTLG-- 95
DLS+N Y + L L N L NLQ L+L N+ LTTL
Sbjct: 187 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNR-LTTLSKE 245
Query: 96 LANLPNLKTLDLRDCGITTI 115
+ L NLK+LDLR +TT
Sbjct: 246 IEQLQNLKSLDLRSNQLTTF 265
>gi|413949465|gb|AFW82114.1| hypothetical protein ZEAMMB73_510951 [Zea mays]
Length = 606
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 31/115 (26%)
Query: 32 TNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANL-TNLQVLDLSGN-- 88
++L LDL C ++ + L K+KNLE LDLS N G++E +A + TNLQ L L
Sbjct: 287 SSLIHLDLSSCKLSNLSFLEKMKNLEHLDLSYNIITDGAIEHIAKIGTNLQYLSLKNTGI 346
Query: 89 ------------QNLTTLGLAN-------------LPNLKTLDLRDCGITTIQGI 118
NLT+L LAN +P L+T+DL T+I+G
Sbjct: 347 TSQALCILAGTVPNLTSLSLANTKIDDSALAYIGMIPLLRTIDLSQ---TSIKGF 398
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT---IQGLAKLKNLE 57
L + RYL+VL L+ NI + ++ L+ + LK+LDL C + I+ + +++LE
Sbjct: 93 LGSFRYLRVLKLADCKNINNDAV--WSLSGMNTLKELDLSRCKKISDAGIKHIVTIESLE 150
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LS + +++LTNL LDL G
Sbjct: 151 KLHLSETELTDNGVMLISSLTNLSFLDLGG 180
>gi|359488101|ref|XP_002263761.2| PREDICTED: disease resistance protein At4g27190-like [Vitis
vinifera]
Length = 1677
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSS 63
++ L+VLDLS + SL L L LTNL+ L L+GC + I +AKLK LE L L
Sbjct: 551 MKQLKVLDLS---RMQLPSLP-LSLHCLTNLRTLCLNGCKVGDIVIIAKLKKLEILSLID 606
Query: 64 NYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLD 106
+ E +A LT+L++LDLSG+ L + + +L L+
Sbjct: 607 SDMEQLPRE-IAQLTHLRLLDLSGSSKLKVIPSGVISSLSQLE 648
>gi|185133556|ref|NP_001117163.1| toll-like leucine-rich repeat precursor [Salmo salar]
gi|54610172|gb|AAV35178.1| toll-like leucine-rich repeat protein precursor [Salmo salar]
Length = 664
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 8/127 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEA 58
++LR ++ + L+ N + R L NL++L+L I I L N+
Sbjct: 319 FSSLREVEDITLAQN---KINQIDRGAFWGLENLQRLNLSHNLIGEIYSYTFDNLPNILE 375
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGN--QNLTTLG-LANLPNLKTLDLRDCGITTI 115
LDLS N+ + L NLQ+LDL+GN + L T G LA LPNL+ L L D IT++
Sbjct: 376 LDLSYNHIGALGYQAFTGLPNLQILDLTGNSIRQLGTYGYLAPLPNLQLLHLADNKITSL 435
Query: 116 QGIQQFT 122
+G+ F
Sbjct: 436 EGLLGFA 442
>gi|46445968|ref|YP_007333.1| hypothetical protein pc0334 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399609|emb|CAF23058.1| hypothetical protein pc0334 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 616
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 69/137 (50%), Gaps = 19/137 (13%)
Query: 1 LANLRYL---QVLDLSANYNITSGSLTRLGLANLT---NLKKLDLDGCGITT----IQGL 50
LA+LR L Q L+LS LT GLA+LT NL+ LDL C + + L
Sbjct: 412 LAHLRPLVNLQHLNLSK-----CPKLTDAGLAHLTPLVNLQHLDLSWCPLNFTGAGLAYL 466
Query: 51 AKLKNLEALDLSS-NYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLP---NLKTLD 106
A L +L+ L+L N L L L NLQ LDLSG NLT GL +L NL+ L+
Sbjct: 467 APLIDLQYLNLCCCNELTDIGLMHLTPLVNLQHLDLSGCDNLTDAGLMHLTSLVNLQHLN 526
Query: 107 LRDCGITTIQGIQQFTS 123
LR C T G+ TS
Sbjct: 527 LRCCDNLTKTGLMHLTS 543
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 65/122 (53%), Gaps = 17/122 (13%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLT---NLKKLDLDGCGITTIQGLAKLK--- 54
L NLR+L +LS + +LT GLA+LT NL+ L+L C T GLA L+
Sbjct: 342 LVNLRHL---NLSGDM----SNLTDAGLAHLTPLVNLQHLNLHWCDKLTDDGLAHLRSLV 394
Query: 55 NLEALDLSS-NYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANL-P--NLKTLDLRDC 110
NL+ L+L N L L L NLQ L+LS LT GLA+L P NL+ LDL C
Sbjct: 395 NLQHLNLHCCNKLTDAGLAHLRPLVNLQHLNLSKCPKLTDAGLAHLTPLVNLQHLDLSWC 454
Query: 111 GI 112
+
Sbjct: 455 PL 456
>gi|160879955|ref|YP_001558923.1| leucine-rich repeat-containing protein [Clostridium phytofermentans
ISDg]
gi|160428621|gb|ABX42184.1| leucine-rich repeat protein [Clostridium phytofermentans ISDg]
Length = 772
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L L NL+ LD GI I + LKN+ L L N L + L LT L+VL L+G
Sbjct: 514 LNKLANLEYLDAGQLGIKDITAIGNLKNIRVLYLQRN--LVSDISALKKLTKLEVLSLNG 571
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ + L+ L NL+ L +R+ I I + + T
Sbjct: 572 NQIESISALSTLTNLRELYIRENKIKNISSLNKLT 606
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL LTNLK LDL IT+I L L LE L L N + ++ L L++L ++
Sbjct: 645 GLKVLTNLKYLDLSNNKITSINALKNLSGLETLYLQRNSIT--DISAISTLKKLKLLSMN 702
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
GN+ L L NL+ L L+D I +I ++
Sbjct: 703 GNKISDVKPLTKLANLEKLYLKDNKIKSIASLK 735
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 47 IQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLD 106
I L LKN+++L L +N + + GL LTNL+ LDLS N+ + L NL L+TL
Sbjct: 621 IDSLKNLKNIKSLTLDNN--IIKDITGLKVLTNLKYLDLSNNKITSINALKNLSGLETLY 678
Query: 107 LRDCGITTIQGI 118
L+ IT I I
Sbjct: 679 LQRNSITDISAI 690
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 60/122 (49%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L L+VL L+ N I S S L+ LTNL++L + I I L KL L L+
Sbjct: 558 LKKLTKLEVLSLNGN-QIESIS----ALSTLTNLRELYIRENKIKNISSLNKLTKLILLE 612
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
N + ++ L NL N++ L L N GL L NLK LDL + IT+I ++
Sbjct: 613 GGKNNLQN--IDSLKNLKNIKSLTLDNNIIKDITGLKVLTNLKYLDLSNNKITSINALKN 670
Query: 121 FT 122
+
Sbjct: 671 LS 672
>gi|380016954|ref|XP_003692432.1| PREDICTED: LOW QUALITY PROTEIN: protein phosphatase 1 regulatory
subunit 7-like [Apis florea]
Length = 318
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L LT L +L+L I I+ L L NLE LDLS N +EGL NL NLQ L LS
Sbjct: 74 NLDTLTTLVELELRDNQIVIIENLDVLVNLELLDLSFNRI--KKIEGLENLLNLQKLFLS 131
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTI---QGIQQFTS 123
N+ L++L NL TL+L D I I +G++ T+
Sbjct: 132 SNKIQCIENLSHLKNLITLELGDNKIREIINLEGLENLTN 171
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 64/140 (45%), Gaps = 32/140 (22%)
Query: 7 LQVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
++ LD+ N + S R+ GL NL NL+KL L I I+ L+ LKNL L+L
Sbjct: 94 IENLDVLVNLELLDLSFNRIKKIEGLENLLNLQKLFLSSNKIQCIENLSHLKNLITLELG 153
Query: 63 SNYYLH-GSLEGLANLTNLQVLDLSGNQNLTTL--------------------GLANLPN 101
N +LEGL NLTNL + G +T + + NL
Sbjct: 154 DNKIREIINLEGLENLTNLXL----GKNKITKIKNLGCLQNLQLLSLQSNRITKIENLEE 209
Query: 102 LKTLD---LRDCGITTIQGI 118
LK LD L + GI+ I+G+
Sbjct: 210 LKNLDQIYLSENGISCIEGL 229
>gi|302143655|emb|CBI22408.3| unnamed protein product [Vitis vinifera]
Length = 1224
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSS 63
++ L+VLDLS + SL L L LTNL+ L L+GC + I +AKLK LE L L
Sbjct: 459 MKQLKVLDLS---RMQLPSLP-LSLHCLTNLRTLCLNGCKVGDIVIIAKLKKLEILSLID 514
Query: 64 NYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLD 106
+ E +A LT+L++LDLSG+ L + + +L L+
Sbjct: 515 SDMEQLPRE-IAQLTHLRLLDLSGSSKLKVIPSGVISSLSQLE 556
>gi|344171427|emb|CCA83919.1| leucine-rich repeat protein type III effector protein [blood
disease bacterium R229]
Length = 741
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 21/131 (16%)
Query: 1 LANLRYLQVLDLS----------------ANYNITSGSLTRL--GLANLTNLKKLDLDGC 42
L NLR LQ LDL ++ S LT + +A L NLK+L +
Sbjct: 148 LNNLRELQKLDLRDTGITELPQINRLSQLKTLSVDSTPLTAMPSDIAALRNLKRLMVTRT 207
Query: 43 GITTIQG-LAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANL 99
I + + L +L+ L LS N++L + NL+ L+ L L+GN+ L + + NL
Sbjct: 208 NIREVPSTIGNLMHLKTLTLSRNHHLQAVPASIGNLSGLEELSLNGNRGLRAVPDSIGNL 267
Query: 100 PNLKTLDLRDC 110
+LK L L DC
Sbjct: 268 RHLKKLYLHDC 278
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 67 LHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGITTIQGIQQFT 122
LH E NL LQ L L + NL L L NL L+ LDLRD GIT + I + +
Sbjct: 117 LHVLPEHFGNLNQLQELSLLYHLNLRRLPDSLNNLRELQKLDLRDTGITELPQINRLS 174
>gi|297587890|ref|ZP_06946534.1| albumin-binding protein family protein [Finegoldia magna ATCC
53516]
gi|297574579|gb|EFH93299.1| albumin-binding protein family protein [Finegoldia magna ATCC
53516]
Length = 1814
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 38/102 (37%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L +L NLK L+L IT + LA LKNLE L L +N L ++E L +LTNL LDL
Sbjct: 546 LKDLKNLKYLELQRNRITDVSSLANLKNLEFLKLYNN--LIENVEPLKDLTNLTGLDLHN 603
Query: 88 NQNLTTLG-----------LANLPNLKTLDLRDCGITTIQGI 118
N N+ G +++L NL L D I+ +
Sbjct: 604 NVNVIKEGQKRINYDGITDISSLKNLTKLTFFDVSANKIENV 645
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 16 YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
++IT G + G+ NL+KL ++ I+ I L LKNL+ L+L N + LA
Sbjct: 512 FSITRGMKSLKGIEYAINLEKLKVNENEISDISPLKDLKNLKYLELQRNRIT--DVSSLA 569
Query: 76 NLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
NL NL+ L L N L +L NL LDL + + I+ Q+ +Y
Sbjct: 570 NLKNLEFLKLYNNLIENVEPLKDLTNLTGLDLHN-NVNVIKEGQKRINY 617
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 52/121 (42%), Gaps = 17/121 (14%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L +L+ L+ L+L N IT S LANL NL+ L L I ++ L L NL LD
Sbjct: 546 LKDLKNLKYLELQRN-RITDVS----SLANLKNLEFLKLYNNLIENVEPLKDLTNLTGLD 600
Query: 61 LSSN------------YYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLR 108
L +N Y + L NLT L D+S N+ + + + LD
Sbjct: 601 LHNNVNVIKEGQKRINYDGITDISSLKNLTKLTFFDVSANKIENVDIILGMEKINNLDFS 660
Query: 109 D 109
D
Sbjct: 661 D 661
>gi|423616588|ref|ZP_17592422.1| hypothetical protein IIO_01914, partial [Bacillus cereus VD115]
gi|401258404|gb|EJR64590.1| hypothetical protein IIO_01914, partial [Bacillus cereus VD115]
Length = 590
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ NL+ L V AN IT S ANL L L L G I + L K+ NLE+LD
Sbjct: 241 MPNLKSLTV----ANAKITDPSF----FANLKQLNHLALRGNEIVDVTPLIKMDNLESLD 292
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
LS+N ++ L + N+++L ++GNQ LA + L L+L + IT +
Sbjct: 293 LSNNKIT--NVAPLTEMKNVKILYVAGNQIEDVTALAKMGQLDYLNLANNKITNV 345
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-----TIQGLAKLKN 55
LAN + V L + N+T +L + ++T L L L +T + G+ +L
Sbjct: 337 LANNKITNVAPLRSLKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDLSGIDQLNQ 396
Query: 56 LEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L+ L + N + L +T+L+VLD+ N+ L+NL NL+ LDL I+ +
Sbjct: 397 LDELWIGKNQI--EDVTPLTKMTHLKVLDVPNNELKDITPLSNLVNLQKLDLEANYISDL 454
Query: 116 QGIQQF 121
I Q
Sbjct: 455 SPISQL 460
>gi|242047710|ref|XP_002461601.1| hypothetical protein SORBIDRAFT_02g005240 [Sorghum bicolor]
gi|241924978|gb|EER98122.1| hypothetical protein SORBIDRAFT_02g005240 [Sorghum bicolor]
Length = 551
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 65/120 (54%), Gaps = 8/120 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLT-NLKKLDLDGCGIT--TIQGLAKLKNLE 57
+ +L+ L+ LD++ N +T L R +ANL NL+ L + G I+ + + LK L+
Sbjct: 178 IGDLKQLKTLDVNWNSGLTE--LPR-EMANLQHNLETLRIRGAMISEQAWEIIGALKKLK 234
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGITTI 115
LD+S N L G + L L+ LD+SG+ +T L + NL L+TL L GIT +
Sbjct: 235 TLDVSENPELSGIPRDIGELQQLKNLDMSGSSRITELPREIGNLQRLQTLCLSHTGITEL 294
>gi|84996475|ref|XP_952959.1| protein phosphatase regulator subunit [Theileria annulata strain
Ankara]
gi|65303956|emb|CAI76335.1| protein phosphatase regulator subunit, putative [Theileria
annulata]
Length = 308
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 8 QVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSS 63
Q L + + + L+R+ L++L NLKKL L I I+ L + LE LDL
Sbjct: 14 QDLTVEDSAEVVEFHLSRIKYIENLSHLKNLKKLCLVSNIIHKIENLEQNTELEHLDLYQ 73
Query: 64 NYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLD 106
N H +E L NLTNL+VLDLS N+ + + NL+TLD
Sbjct: 74 NRIKH--IENLENLTNLKVLDLSFNE------IDKIENLETLD 108
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 53/124 (42%), Gaps = 31/124 (25%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L NLTNLK LDL I I+ L L LE L LS+N LA+ NL +L+L
Sbjct: 81 NLENLTNLKVLDLSFNEIDKIENLETLDKLEQLYLSNNKISEAC--NLAHFKNLTLLELG 138
Query: 87 GNQ---------------------NLTTLGLANLPNLKTLDLR--------DCGITTIQG 117
N+ LTT+ + LPNL+ ++ +C + +
Sbjct: 139 SNKVRDYGDVEHLRTLNALWLGKNKLTTMSIPELPNLEKCSIQNNRVREWDECILKNLPN 198
Query: 118 IQQF 121
+++F
Sbjct: 199 LREF 202
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
I I+ L+ LKNL+ L L SN +H +E L T L+ LDL N+ L NL NLK
Sbjct: 32 IKYIENLSHLKNLKKLCLVSNI-IHK-IENLEQNTELEHLDLYQNRIKHIENLENLTNLK 89
Query: 104 TLDLRDCGITTIQGIQ 119
LDL I I+ ++
Sbjct: 90 VLDLSFNEIDKIENLE 105
>gi|260824061|ref|XP_002606986.1| hypothetical protein BRAFLDRAFT_138079 [Branchiostoma floridae]
gi|229292332|gb|EEN62996.1| hypothetical protein BRAFLDRAFT_138079 [Branchiostoma floridae]
Length = 278
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 6 YLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQ-GLAKLKNLEALDLSSN 64
+L+ LD+ N+++ L G NL NL++L++ C + T+ + KL +++A+ ++ N
Sbjct: 186 HLKTLDMEGNHSLK---LLPEGFENLVNLEELNISYCSVETLPDSIGKLTSMKAIHVAGN 242
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLA 97
L E NL NL+ LDL GN+ L+ L L+
Sbjct: 243 R-LRRIPENFGNLLNLETLDLEGNRRLSGLPLS 274
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 31/139 (22%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG-LAKLKNLEALDLS 62
++ +++LD+S N GS+ + +A+L+NLK+L CGI + G +++ L +DLS
Sbjct: 20 IKDIEILDVSNN---PLGSIP-VNIASLSNLKELRAADCGIREVSGNISRCSYLNKVDLS 75
Query: 63 SN-----------YYLHGSLEGLAN------------LTNLQVLDLSGNQNLTTLG--LA 97
N + LH L+N L ++ LDLS N+ LT L ++
Sbjct: 76 RNPGISSLPVTMKHNLHLKHFALSNCELKSLPKNLTILAKIETLDLSNNE-LTNLPPDIS 134
Query: 98 NLPNLKTLDLRDCGITTIQ 116
L LK L+L D +I
Sbjct: 135 GLKRLKVLNLSDNAFESIP 153
>gi|356577875|ref|XP_003557047.1| PREDICTED: uncharacterized protein LOC100784241 [Glycine max]
Length = 1523
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 11/120 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI--QGLAKLKNLEA 58
L L+YL LDLS+NY + + + LG +L +L+ LDL G + L L NL+
Sbjct: 72 LLELKYLNRLDLSSNYFVLTPIPSFLG--SLESLRYLDLSLSGFMGLIPHQLGNLSNLQH 129
Query: 59 LDLSSNYYLH-GSLEGLANLTNLQVLDLSGNQNLTTLG-----LANLPNLKTLDLRDCGI 112
L+L NY L +L ++ L++L+ LDLSG+ +L G L+ LP+L L L C I
Sbjct: 130 LNLGYNYALQIDNLNWISRLSSLEYLDLSGS-DLHKQGNWLQVLSALPSLSELHLESCQI 188
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 26/113 (23%)
Query: 2 ANLRYLQVLDLSAN-----------------------YNITSGSLTRLGLANLTNLKKLD 38
AN +LQVLDLS N N+ G + ++ +++L N+K LD
Sbjct: 198 ANFTHLQVLDLSINNLNHQIPSWLFNLSTTLVQLDLHSNLLQGQIPQI-ISSLQNIKNLD 256
Query: 39 LDGCGITTI--QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
L ++ L +LK+LE L+LS+N + ANL++L+ L+L+ N+
Sbjct: 257 LQNNQLSGPLPDSLGQLKHLEVLNLSNNTFTCPIPSPFANLSSLRTLNLAHNR 309
>gi|356561608|ref|XP_003549073.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
FLS2-like [Glycine max]
Length = 936
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 14/133 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI--QGLAKLKNLEA 58
L L+YL LDLS+NY + + + LG +L +L+ LDL G + L L NL+
Sbjct: 72 LLELKYLNRLDLSSNYFVLTPIPSFLG--SLESLRYLDLSLSGFMGLIPHQLGNLSNLQH 129
Query: 59 LDLSSNYYLH-GSLEGLANLTNLQVLDLSGNQNLTTLG-----LANLPNLKTLDLRDCGI 112
L+L NY L +L ++ L++L+ LDLSG+ +L G L+ LP+L L L C I
Sbjct: 130 LNLGYNYALQIDNLNWISRLSSLEYLDLSGS-DLHKQGNWLQVLSALPSLSELHLESCQI 188
Query: 113 TTI---QGIQQFT 122
+ +G FT
Sbjct: 189 DNLGPPKGKANFT 201
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI----TTIQGLAKLKNL 56
L NL LQ L+L NY + +L + + L++L+ LDL G + +Q L+ L +L
Sbjct: 121 LGNLSNLQHLNLGYNYALQIDNLNWI--SRLSSLEYLDLSGSDLHKQGNWLQVLSALPSL 178
Query: 57 EALDLSSNYYLH-GSLEGLANLTNLQVLDLSGN 88
L L S + G +G AN T+LQVLDLS N
Sbjct: 179 SELHLESCQIDNLGPPKGKANFTHLQVLDLSIN 211
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 26/113 (23%)
Query: 2 ANLRYLQVLDLSAN-----------------------YNITSGSLTRLGLANLTNLKKLD 38
AN +LQVLDLS N N+ G + ++ +++L N+K LD
Sbjct: 198 ANFTHLQVLDLSINNLNQQIPSWLFNLSTTLVQLDLHSNLLQGQIPQI-ISSLQNIKNLD 256
Query: 39 LDGCGIT--TIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
L ++ L +LK+LE L+LS+N + ANL++L+ L+L+ N+
Sbjct: 257 LQNNQLSGPLPDSLGQLKHLEVLNLSNNTFTCPIPSPFANLSSLRTLNLAHNR 309
>gi|338721402|ref|XP_001915618.2| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and IQ
domain-containing protein 1 [Equus caballus]
Length = 1670
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA NL+ L L CG+T++ L+ K L+ +D N+ S E NL +L V+ LS
Sbjct: 817 LAECANLQFLSLQRCGLTSLHNLSNCKKLKYIDAQENHIETISCE---NLADLCVVLLSK 873
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
NQ + GL N++ L+L IT I G++
Sbjct: 874 NQLTSFHGLDGCTNIQNLELSHNKITRIGGLESL 907
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+N + L+ +D N+ + + NL +L + L +T+ GL N++ L+
Sbjct: 839 LSNCKKLKYIDAQENH------IETISCENLADLCVVLLSKNQLTSFHGLDGCTNIQNLE 892
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
LS N + GL +L NLQ L + NQ ++T GL + P + LD +T ++GI+
Sbjct: 893 LSHNKITR--IGGLESLKNLQRLIVDHNQLISTRGLCDTPTIIHLDCSYNHLTEVEGIE 949
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 15 NYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEG 73
N ++ +TR+G L +L NL++L +D + + +GL + LD S N+ +EG
Sbjct: 890 NLELSHNKITRIGGLESLKNLQRLIVDHNQLISTRGLCDTPTIIHLDCSYNHLTE--VEG 947
Query: 74 LANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
+ N LQ+L L GN L N L+ L L D I+T++ F+SY
Sbjct: 948 IENCGLLQILKLQGNYLSELPSLENHVLLRELHLDDNSISTVEA---FSSY 995
>gi|260804004|ref|XP_002596879.1| hypothetical protein BRAFLDRAFT_156516 [Branchiostoma floridae]
gi|229282139|gb|EEN52891.1| hypothetical protein BRAFLDRAFT_156516 [Branchiostoma floridae]
Length = 314
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 65/141 (46%), Gaps = 25/141 (17%)
Query: 1 LANLRYLQVLDLSAN--------------------YNITSGSLTRLG-LANLTNLKKLDL 39
+NLR L+ LDL +N +N + +LG +NL L KLD+
Sbjct: 16 FSNLRKLRTLDLGSNQISNIDSDMFSNIPTMRKLDFNYNQVTCIQLGTFSNLPQLYKLDI 75
Query: 40 DGCGITTIQ--GLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLG 95
IT I + L L+ LDL N+ + S ++L L LDLS N +
Sbjct: 76 AHNQITNISPGAFSSLPQLQRLDLRFNHITNISPGAFSDLHQLLRLDLSSNHITEIQPGT 135
Query: 96 LANLPNLKTLDLRDCGITTIQ 116
+NLP+L+TL LR +TTIQ
Sbjct: 136 FSNLPSLQTLSLRCNQMTTIQ 156
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 57/116 (49%), Gaps = 13/116 (11%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQ--GLAKLKNL 56
+NL L LD++ N NI+ G+ ++L L++LDL IT I + L L
Sbjct: 64 FSNLPQLYKLDIAHNQITNISPGAF-----SSLPQLQRLDLRFNHITNISPGAFSDLHQL 118
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG---LANLPNLKTLDLRD 109
LDLSSN+ +NL +LQ L L NQ +TT+ NLP L LRD
Sbjct: 119 LRLDLSSNHITEIQPGTFSNLPSLQTLSLRCNQ-MTTIQPGTFQNLPKHDILSLRD 173
>gi|225425700|ref|XP_002270151.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At4g36180 [Vitis vinifera]
Length = 917
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI--TTIQGLAKLKNLEA 58
L +L++L+ LDLS+NY GS A+L L+ L+L G L L NL+
Sbjct: 106 LLDLKHLRCLDLSSNY--FGGSQIPQFFASLATLRYLNLSKAGFAGPIPTQLGNLSNLQH 163
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LD+ N LE + NLT+LQVLD+SG
Sbjct: 164 LDIKGNSLNVEDLEWVGNLTSLQVLDMSG 192
>gi|9631406|ref|NP_048311.1| ORF MSV240 leucine rich repeat gene family protein, similar to
Amsacta moorei entomopoxvirus Q3 ORF SW:P28854
[Melanoplus sanguinipes entomopoxvirus]
gi|4049759|gb|AAC97719.1| ORF MSV240 leucine rich repeat gene family protein, similar to
Amsacta moorei entomopoxvirus Q3 ORF SW:P28854
[Melanoplus sanguinipes entomopoxvirus]
Length = 527
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 25/137 (18%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L L L+++AN N+ SL + + +K L GC IT + L +LKNLE LD
Sbjct: 296 LERLENLIELNITANKNLNISSLYYIPKS----VKILFCRGCNITDFKFLERLKNLEILD 351
Query: 61 LSSN--------YYL------------HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLP 100
+S N YY+ H + L L NL L + GN+N+ L +P
Sbjct: 352 ISCNRNINISSLYYIPKSVKKLQYECCHTDFKFLETLDNLIELSILGNRNVNISSLYYIP 411
Query: 101 -NLKTLDLRDCGITTIQ 116
++K L+ +C IT +
Sbjct: 412 KSVKKLNCLNCDITDFK 428
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 26/100 (26%)
Query: 19 TSGSLTRLGLANLT-NLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANL 77
+S + + + L NL ++KKLD C +T + L L NLE L++S
Sbjct: 442 SSNTDSNISLCNLPKSIKKLDCGHCNLTDCKFLEALNNLEELNIS--------------- 486
Query: 78 TNLQVLDLSGNQNLTTLGLANLPN-LKTLDLRDCGITTIQ 116
GN+NL L L LP +KT++ C +T +
Sbjct: 487 ---------GNKNLNNLSLYYLPKCIKTINYTHCNLTDFK 517
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 22/100 (22%)
Query: 34 LKKLDLDGCGITTIQGLAKLKNLEALDLSSN--------YYLHGS-------------LE 72
+K L C IT + L +L+NL L++++N YY+ S +
Sbjct: 280 VKILKCHICNITDFKFLERLENLIELNITANKNLNISSLYYIPKSVKILFCRGCNITDFK 339
Query: 73 GLANLTNLQVLDLSGNQNLTTLGLANLP-NLKTLDLRDCG 111
L L NL++LD+S N+N+ L +P ++K L C
Sbjct: 340 FLERLKNLEILDISCNRNINISSLYYIPKSVKKLQYECCH 379
>gi|388852702|emb|CCF53620.1| probable SDS22-protein phosphatase 1, regulatory subunit 7
[Ustilago hordei]
Length = 422
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL++LTNLK L + IT ++GL +L NLE L +S N LEGL T L VLD+
Sbjct: 283 GLSSLTNLKVLSIQSNRITKLEGLEQLVNLEELYISHNGLT--KLEGLERNTKLTVLDVG 340
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
GN + +L ++ D I I G+ Q
Sbjct: 341 GNMIEKVENVRHLEKMEEFWANDNKIADINGLDQ 374
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 33 NLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLT 92
+L+ L+L G + I+ + L NL L L N + SL GL++LTNL+VL + N+
Sbjct: 245 SLQSLELGGNRLRAIENIGHLANLTKLWLGKNKII--SLHGLSSLTNLKVLSIQSNRITK 302
Query: 93 TLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
GL L NL+ L + G+T ++G+++ T
Sbjct: 303 LEGLEQLVNLEELYISHNGLTKLEGLERNTK 333
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 19/130 (14%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLAN--------LTNLKKLDLDGCGITTIQGLAK 52
L L+ L+ LDLS N +++ LG ++ ++ DLDG I G
Sbjct: 192 LDELKKLESLDLSFNNIHHISNVSHLGQCKELFFVQNKISRVRPDDLDGA----IAG--- 244
Query: 53 LKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGI 112
+L++L+L N ++E + +L NL L L N+ ++ GL++L NLK L ++ I
Sbjct: 245 --SLQSLELGGNRLR--AIENIGHLANLTKLWLGKNKIISLHGLSSLTNLKVLSIQSNRI 300
Query: 113 TTIQGIQQFT 122
T ++G++Q
Sbjct: 301 TKLEGLEQLV 310
>gi|357468933|ref|XP_003604751.1| Receptor-like protein kinase [Medicago truncatula]
gi|355505806|gb|AES86948.1| Receptor-like protein kinase [Medicago truncatula]
Length = 1117
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 7/114 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI--QGLAKLKNLEA 58
LA L+ L VL LS N N++S + AN +NL L + CG+ + + ++ L+
Sbjct: 229 LARLQSLSVLKLSHN-NLSS--IVPDSFANFSNLTTLQISSCGLNGFFPKDIFQIHTLKV 285
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDC 110
LD+S N L+GSL + L +L+ L+L+ L ++NL +L T+DL C
Sbjct: 286 LDISYNQNLNGSLPDFSTLASLKYLNLADTNFSGPLPNTISNLKHLSTIDLSHC 339
>gi|307213325|gb|EFN88777.1| Protein phosphatase 1 regulatory subunit 7 [Harpegnathos saltator]
Length = 322
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L LT L +L+L I TI+ L L NLE LDLS N +EGL NL NLQ L LS
Sbjct: 74 NLDTLTTLVELELRDNQIMTIENLDVLVNLELLDLSFNRI--KKIEGLDNLLNLQKLFLS 131
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
N+ + +L NL TL+L D I I+ ++
Sbjct: 132 SNKISHIENILHLVNLTTLELGDNKIREIENLE 164
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 24/137 (17%)
Query: 7 LQVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
++ LD+ N + S R+ GL NL NL+KL L I+ I+ + L NL L+L
Sbjct: 94 IENLDVLVNLELLDLSFNRIKKIEGLDNLLNLQKLFLSSNKISHIENILHLVNLTTLELG 153
Query: 63 SNYYLH-GSLEGLANLTNL--------QVLDLSGNQNLTTLGL--------ANLPNLKTL 105
N +LEGL L NL ++ +L Q+LT L L N+ L+ L
Sbjct: 154 DNKIREIENLEGLQKLINLYLGKNKITKIQNLESLQDLTLLSLQSNRIVKIENIEELRKL 213
Query: 106 D---LRDCGITTIQGIQ 119
D L + GIT I+GI+
Sbjct: 214 DQLYLSENGITCIEGIE 230
>gi|432881065|ref|XP_004073788.1| PREDICTED: acidic leucine-rich nuclear phosphoprotein 32 family
member E-like [Oryzias latipes]
Length = 234
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 30 NLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN-LTNLQVLDLSGN 88
T L+ L + G++++ L L L L+LS N L GSLE LA NL L+LSGN
Sbjct: 40 EFTELEFLSMVNVGLSSLTKLPPLPKLRKLELSDNN-LSGSLETLAEKCPNLTYLNLSGN 98
Query: 89 --QNLTTL-GLANLPNLKTLDLRDCGITTIQGIQQ 120
+ L+TL L NL +L++LDL +C IT+++ ++
Sbjct: 99 KIKELSTLEALQNLKSLQSLDLFNCEITSLEDYRE 133
>gi|347547841|ref|YP_004854169.1| putative internalin A [Listeria ivanovii subsp. ivanovii PAM 55]
gi|346980912|emb|CBW84831.1| Putative internalin A [Listeria ivanovii subsp. ivanovii PAM 55]
Length = 798
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++L+L IT I +AKL NL++L L +N + L L LTNL L L
Sbjct: 203 LANLTKLERLNLSRNKITDISPVAKLINLQSLSLDNNQF--SDLTPLGILTNLTELSLYS 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
N L+ +G LA+L NLK L+L D I+ + I T
Sbjct: 261 NH-LSDIGTLASLTNLKKLNLMDNQISNLAPISNLT 295
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 20 SGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLT 78
S L+ +G LA+LTNLKKL+L I+ + ++ L NL L+LS+N L+ ++NLT
Sbjct: 260 SNHLSDIGTLASLTNLKKLNLMDNQISNLAPISNLTNLTDLNLSTNQI--SDLKPISNLT 317
Query: 79 NLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NL VL + NQ +++LPNL+ L L I+ + ++ T
Sbjct: 318 NLTVLQVPTNQLEDISPISSLPNLEFLTLYTNQISDLSPLENLT 361
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 63/122 (51%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ L+LS N IT S +A L NL+ L LD + + L L NL L
Sbjct: 203 LANLTKLERLNLSRN-KITDIS----PVAKLINLQSLSLDNNQFSDLTPLGILTNLTELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
L SN+ + LA+LTNL+ L+L NQ ++NL NL L+L I+ ++ I
Sbjct: 258 LYSNHL--SDIGTLASLTNLKKLNLMDNQISNLAPISNLTNLTDLNLSTNQISDLKPISN 315
Query: 121 FT 122
T
Sbjct: 316 LT 317
Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 59/130 (45%), Gaps = 33/130 (25%)
Query: 24 TRLGLANLTN-LKKLDLDGC--------GITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T LG A +++ + + DLDG GIT+I G+ L N+ LD S N L L
Sbjct: 59 TDLGKATVSDTVTQTDLDGITSLEADRKGITSIAGVEYLNNVTQLDFSYNQITD--LTPL 116
Query: 75 ANLTNL--------QVLDLSGNQNLTTL--------------GLANLPNLKTLDLRDCGI 112
ANLT L Q+ DL+ QNLT+L LANL NL L + D I
Sbjct: 117 ANLTKLTSLVMNNNQIADLTPLQNLTSLTELTLFYNKITDVAPLANLTNLTNLAITDNEI 176
Query: 113 TTIQGIQQFT 122
+ + I T
Sbjct: 177 SDVTPIGNLT 186
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 16/111 (14%)
Query: 8 QVLDLSANYNITSGSLTRL-----------GLANLTNLKKLDLDGCGITTIQGLAKLKNL 56
Q+ DL+ N+TS LT L LANLTNL L + I+ + + L NL
Sbjct: 131 QIADLTPLQNLTS--LTELTLFYNKITDVAPLANLTNLTNLAITDNEISDVTPIGNLTNL 188
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL 107
E L + + ++ LANLT L+ L+LS N+ +A L NL++L L
Sbjct: 189 EGLSIGNKV---TDIKPLANLTKLERLNLSRNKITDISPVAKLINLQSLSL 236
>gi|194333748|ref|YP_002015608.1| internalin-like protein [Prosthecochloris aestuarii DSM 271]
gi|194311566|gb|ACF45961.1| internalin-related protein [Prosthecochloris aestuarii DSM 271]
Length = 399
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
+A LT L+K+ I +++ LA+L+NL ++L N+ L L+ L NL NL+ L S
Sbjct: 252 VAELTKLEKISCYKTAIASLKPLARLENL--IELGFNHTLVTDLDPLTNLENLEYLRFSN 309
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQ 116
+ LA+ NL+ L D GITT++
Sbjct: 310 TAISSLDPLAHHINLRELSFNDTGITTLE 338
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA L NL +L + +T + L L+NLE L S+ SL+ LA+ NL+ L +
Sbjct: 274 LARLENLIELGFNHTLVTDLDPLTNLENLEYLRFSNTAI--SSLDPLAHHINLRELSFND 331
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
T LA+LP L+ + +++I+ + +
Sbjct: 332 TGITTLEPLASLPELEEVSFAATAVSSIKPLMEL 365
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL L+ L S N SL L A+ NL++L + GITT++ LA L LE +
Sbjct: 296 LTNLENLEYLRFS---NTAISSLDPL--AHHINLRELSFNDTGITTLEPLASLPELEEVS 350
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
++ S++ L L ++ ++LS NQ
Sbjct: 351 FAATAV--SSIKPLMELEYIEKIELSKNQ 377
>gi|255546363|ref|XP_002514241.1| protein phosphatases pp1 regulatory subunit, putative [Ricinus
communis]
gi|223546697|gb|EEF48195.1| protein phosphatases pp1 regulatory subunit, putative [Ricinus
communis]
Length = 312
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 8/120 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL LQ L L N + + L L +KKL L +T+++GL + LE L
Sbjct: 181 LQNLTTLQELWLGRNR------IKTINLCGLKCIKKLSLQSNRLTSMKGLEECVALEELY 234
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
LS N +EGL+ L NL VLD+S N+ + + NL ++ L L D I +++GI +
Sbjct: 235 LSHNGI--SKMEGLSTLVNLSVLDVSSNKLTSVDDIQNLTQIEDLWLNDNQIESLEGIAE 292
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLT L++L L I TI L LK ++ L L SN S++GL L+ L LS
Sbjct: 181 LQNLTTLQELWLGRNRIKTI-NLCGLKCIKKLSLQSNRL--TSMKGLEECVALEELYLSH 237
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N GL+ L NL LD+ +T++ IQ T
Sbjct: 238 NGISKMEGLSTLVNLSVLDVSSNKLTSVDDIQNLT 272
>gi|222636135|gb|EEE66267.1| hypothetical protein OsJ_22457 [Oryza sativa Japonica Group]
Length = 1045
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 9/113 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNLEA 58
L +++ LQ L L AN G L + LA LTNL LDL T + ++K+ LE
Sbjct: 249 LFDVKPLQHLQLPANQ--IEGRLDQDSLAKLTNLVTLDLSYNLFTGELPESISKMPKLEE 306
Query: 59 LDLSSNYYLHGSL-EGLANLTNLQVLDLSGNQ---NLTTLGLANLPNLKTLDL 107
L L++N L G+L L+N T+L+ +DL N NLT + + LPNL D+
Sbjct: 307 LRLANNN-LTGTLPSALSNWTSLRFIDLRSNSFVGNLTDVDFSGLPNLTVFDV 358
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 50 LAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDL 107
LAKL NL LDLS N + E ++ + L+ L L+ N TL L+N +L+ +DL
Sbjct: 274 LAKLTNLVTLDLSYNLFTGELPESISKMPKLEELRLANNNLTGTLPSALSNWTSLRFIDL 333
Query: 108 R 108
R
Sbjct: 334 R 334
>gi|443652792|ref|ZP_21130908.1| small GTP-binding domain protein [Microcystis aeruginosa
DIANCHI905]
gi|443334234|gb|ELS48757.1| small GTP-binding domain protein [Microcystis aeruginosa
DIANCHI905]
Length = 875
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 66/117 (56%), Gaps = 7/117 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
LA L LQ LDLS N + + LA+LT+L++LDL I I + LA L +LE L
Sbjct: 104 LAQLTSLQRLDLSDN---QIREIPK-ALAHLTSLQELDLSDNQIREIPEALAHLTSLELL 159
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ-NLTTLGLANLPNLKTLDLRDCGITTI 115
L++N + E LA+LT+LQVL LS NQ LA L +L+ L L++ I I
Sbjct: 160 FLNNNQ-IKEIPEALAHLTSLQVLYLSNNQIREIPEALAQLTSLQNLHLKNNQIREI 215
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 28 LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+ +LT+L++L+L I+ I + LA+L +L+ L L +N + E L +LT+LQVL L+
Sbjct: 35 IPHLTSLQELNLSNNQISEIPEALAQLTSLQRLYLKNNQ-IREIPEALTHLTSLQVLYLN 93
Query: 87 GNQ-NLTTLGLANLPNLKTLDLRDCGITTI 115
NQ + LA L +L+ LDL D I I
Sbjct: 94 NNQISEIPEALAQLTSLQRLDLSDNQIREI 123
>gi|341874328|gb|EGT30263.1| hypothetical protein CAEBREN_21124 [Caenorhabditis brenneri]
Length = 683
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 30 NLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSS-NYYLHGSLEGLANLTNLQVLDLSGN 88
+ LKKL + G G+T I+G+++LKNLE ++S + ++ LA+LT L+VL++SG
Sbjct: 146 SFAKLKKLSVYGTGLTNIEGISELKNLELFNISDVKFESKDDIKELASLTKLRVLNISGQ 205
Query: 89 Q----NLTTLGLANLPNLKTLDLRDCGITT 114
N L LAN L L D T
Sbjct: 206 HENDLNTLQLYLANDCVLNELRFIDISFNT 235
>gi|242017024|ref|XP_002428993.1| leucine-rich transmembrane protein, putative [Pediculus humanus
corporis]
gi|212513839|gb|EEB16255.1| leucine-rich transmembrane protein, putative [Pediculus humanus
corporis]
Length = 736
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQ--GLAKLKNLEALDL 61
L+ L+ LDLS YN S + NL NLK LDL I I +++KNL + L
Sbjct: 149 LKQLERLDLS--YNKLSD-INFQSFVNLINLKYLDLSNNRIVNISFDAFSQMKNLTVIKL 205
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSGNQ---NLTTLGLANLPNLKTLDLRDCGITTI-QG 117
+ N + ++ L + L+ LDLS N+ L + L N+P LKTL L + ++I QG
Sbjct: 206 NKNRLMISTISALTKINKLEELDLSTNELSGPLESETLPNMPALKTLSLANNQFSSINQG 265
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 15/92 (16%)
Query: 20 SGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSNYYLHGSLEGLANL 77
SGS+ LGL N KL+ T+ G L LK LE LDLS N + + NL
Sbjct: 125 SGSVQALGLPN----NKLE-------TVPGEALKVLKQLERLDLSYNKLSDINFQSFVNL 173
Query: 78 TNLQVLDLSGNQ--NLTTLGLANLPNLKTLDL 107
NL+ LDLS N+ N++ + + NL + L
Sbjct: 174 INLKYLDLSNNRIVNISFDAFSQMKNLTVIKL 205
>gi|307243240|ref|ZP_07525411.1| leucine Rich repeat protein [Peptostreptococcus stomatis DSM 17678]
gi|306493368|gb|EFM65350.1| leucine Rich repeat protein [Peptostreptococcus stomatis DSM 17678]
Length = 803
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 20/129 (15%)
Query: 10 LDLSANYNIT-------SGSLTRL-----------GLANLTNLKKLDLDGCGITTIQGLA 51
LD+S N NI+ S L RL GL N+ +LK+L + I+ + L
Sbjct: 545 LDISGNKNISDLSPLFNSNKLVRLLANGNKITSLEGLRNMIDLKELHVSENKISDLSPLE 604
Query: 52 KLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDC 110
KL NL+ LD+ +N + S+E L NLTN+ L ++ + + +++L NL L++ C
Sbjct: 605 KLLNLDDLDIGNNPDIE-SIEVLKNLTNISELKMNNAKKVKDFTPISSLKNLDELNITRC 663
Query: 111 GITTIQGIQ 119
G+T I ++
Sbjct: 664 GLTDISFLE 672
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGS-----LEGLANLTNLQ 81
GL N+K LDL G + + L KNLE LDL Y + + L L NL+
Sbjct: 394 GLEYAHNIKSLDLAGNEVVDLSPLKACKNLEVLDLGDQYLYENNQYLTDISPLGGLPNLK 453
Query: 82 VLDLSGNQNLTTLGLANLPNLKTLDLR-DCGITTIQGIQ 119
L L N+ + ++ L NL+ LDL + GI +I G +
Sbjct: 454 KLILKNNKIVDVTAISKLTNLEELDLYGNRGIKSIDGFE 492
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 43 GITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL------SGNQNLTTLG- 95
GI +++GL N+++LDL+ N + L L NL+VLDL NQ LT +
Sbjct: 388 GIKSLEGLEYAHNIKSLDLAGNEVV--DLSPLKACKNLEVLDLGDQYLYENNQYLTDISP 445
Query: 96 LANLPNLKTLDLRDCGITTIQGIQQFT 122
L LPNLK L L++ I + I + T
Sbjct: 446 LGGLPNLKKLILKNNKIVDVTAISKLT 472
>gi|302822351|ref|XP_002992834.1| hypothetical protein SELMODRAFT_187027 [Selaginella moellendorffii]
gi|300139382|gb|EFJ06124.1| hypothetical protein SELMODRAFT_187027 [Selaginella moellendorffii]
Length = 317
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ N++ L+ L L N + + L LT++ KL L +T++ G + LE L
Sbjct: 162 IENMKRLEELWLGRN------RIRTVNLCGLTSIVKLSLQNNRLTSMLGFEECLALEELY 215
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
LS N +EGLA L NL+VLD+S N+ + + NL L+ L L D I ++ GI+
Sbjct: 216 LSHNGI--SKMEGLATLVNLRVLDVSSNRLTSIADVENLEKLEDLWLNDNNIPSLDGIET 273
Query: 121 FTS 123
S
Sbjct: 274 ILS 276
>gi|193883398|gb|ACF28179.1| hypothetical protein CG12283, partial [Drosophila melanogaster]
Length = 192
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSNY 65
QVLD+S N + + S + ANL NL+KL L C I I+ L NL LDLS N
Sbjct: 81 QVLDMSGN-KLQTLSNEQFIRANLLNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNL 139
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTI 115
+ L ++ +L+ L L+ N + + N P+L LDL C I TI
Sbjct: 140 LVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNTPSLHKLDLSHCDIQTI 191
>gi|158429246|pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
Query: 17 NITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
N +S +T L LANLT L++LD+ ++ I LAKL NLE+L ++N + L
Sbjct: 157 NFSSNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLG 214
Query: 76 NLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
LTNL L L+GNQ L +G LA+L NL LDL + I+ + + T
Sbjct: 215 ILTNLDELSLNGNQ-LKDIGTLASLTNLTDLDLANNQISNLAPLSGLT 261
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L+ S
Sbjct: 103 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLNFSS 160
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 161 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 195
>gi|242802809|ref|XP_002484048.1| protein phosphatase PP1 regulatory subunit Sds22, putative
[Talaromyces stipitatus ATCC 10500]
gi|218717393|gb|EED16814.1| protein phosphatase PP1 regulatory subunit Sds22, putative
[Talaromyces stipitatus ATCC 10500]
Length = 348
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 7/120 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NLR L+ L L N IT L++L+NLK L + +T+I GL+ L +LE L
Sbjct: 188 LDNLRALEQLWLGKN-KITEMK----NLSSLSNLKILSIQSNRLTSITGLSDLHSLEELY 242
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+S N L GL + TNL+VLD S NQ G+++L ++ + + G+++ + +++
Sbjct: 243 ISHNAL--TDLSGLESNTNLRVLDFSNNQVSKLEGISHLTQIEEVWASNNGLSSFEEVER 300
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L +L+ L+L I IQGL L+ LE L L N ++ L++L+NL++L +
Sbjct: 165 GLDELVHLRNLELGANRIREIQGLDNLRALEQLWLGKNKI--TEMKNLSSLSNLKILSIQ 222
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ + GL++L +L+ L + +T + G++ T
Sbjct: 223 SNRLTSITGLSDLHSLEELYISHNALTDLSGLESNT 258
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL NL L++L L IT ++ L+ L NL+ L + SN S+ GL++L +L+ L +S
Sbjct: 187 GLDNLRALEQLWLGKNKITEMKNLSSLSNLKILSIQSNRL--TSITGLSDLHSLEELYIS 244
Query: 87 GNQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQQFT 122
N LT L GL + NL+ LD + ++ ++GI T
Sbjct: 245 HNA-LTDLSGLESNTNLRVLDFSNNQVSKLEGISHLT 280
>gi|260812956|ref|XP_002601186.1| hypothetical protein BRAFLDRAFT_75631 [Branchiostoma floridae]
gi|229286477|gb|EEN57198.1| hypothetical protein BRAFLDRAFT_75631 [Branchiostoma floridae]
Length = 1375
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 65/140 (46%), Gaps = 30/140 (21%)
Query: 1 LANLRYLQVLDLSANYNIT-SGSLTRLGLANLTNLKKLDLDGCGITTIQ-GLAKLKNLEA 58
L L LQ L L N NI S L RL TNLK L LD C + + + KL LE
Sbjct: 56 LFELNELQALRLDRNKNIQLSEKLIRL-----TNLKLLSLDDCNLDIVPAAVMKLSQLET 110
Query: 59 LDLSSNYYL-----HGSLEGLA-----------------NLTNLQVLDLSGNQNLT-TLG 95
L+LS+N + SL L+ NL++L LDLSGN+ ++
Sbjct: 111 LNLSNNMNITLSDKMSSLVNLSTLSLYNCELDSVPPLVLNLSHLHCLDLSGNKQISLPDE 170
Query: 96 LANLPNLKTLDLRDCGITTI 115
L L N+K L LR C + T+
Sbjct: 171 LCRLENVKVLRLRKCSMATV 190
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 66/176 (37%), Gaps = 67/176 (38%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQ-GLAKLKNLEALDL 61
NL +L LDLS N I+ L L N+K L L C + T+ + KL LE LDL
Sbjct: 150 NLSHLHCLDLSGNKQISLPD----ELCRLENVKVLRLRKCSMATVPPAVLKLTQLEELDL 205
Query: 62 SSNYYLH--GSLEGLAN------------------------------------LTNLQVL 83
S N +H LE L N LTN++ L
Sbjct: 206 SWNSGIHLPDELELLTNIRLHTLPPEVGRLAQLERLDLSYNNPPQTLLAEVGQLTNVKHL 265
Query: 84 DLSGNQ-----------------NLTTLGLANLP-------NLKTLDLRDCGITTI 115
DLS Q NL++ L LP N+K LDL +C + T+
Sbjct: 266 DLSHCQLRTLPPEVGRLTQLKWLNLSSNPLQTLPTEVGQLTNVKHLDLSECKLCTL 321
>gi|418712108|ref|ZP_13272853.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
gi|410791375|gb|EKR85051.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
Length = 380
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 7/103 (6%)
Query: 18 ITSGSLTRLG--LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGL 74
+ S LT L + L NL+ L+L +TT+ + + +L+NL++LDL SN E +
Sbjct: 240 LVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKE-I 298
Query: 75 ANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGITTI 115
L NLQVLDL NQ LTTL G+ L NL+TLDL +TT+
Sbjct: 299 GQLKNLQVLDLGSNQ-LTTLPEGIGQLKNLQTLDLDSNQLTTL 340
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ LQ L+L N T + L NLK LDL +T + + +LKNL+ L
Sbjct: 252 IGQLKNLQTLNLRNNRLTTLSK----EIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVL 307
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITT 114
DL SN L EG+ L NLQ LDL NQ LTTL + L NL+ L L + +++
Sbjct: 308 DLGSNQ-LTTLPEGIGQLKNLQTLDLDSNQ-LTTLPQEIGQLQNLQELFLNNNQLSS 362
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 9/118 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ L+ L+LS N T + L L+ L LD +TT+ Q + +L+NL++L
Sbjct: 160 IGQLKNLKSLNLSYNQIKTIPK----EIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 215
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
DLS+N L + + +L NLQ L L NQ LT L + L NL+TL+LR+ +TT+
Sbjct: 216 DLSTN-RLTTLPQEIGHLQNLQDLYLVSNQ-LTILPNEIGQLKNLQTLNLRNNRLTTL 271
>gi|410939195|ref|ZP_11371030.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
gi|410785700|gb|EKR74656.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
Length = 410
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 28 LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+ L NLK+L L +T++ + + +L+NL+ LDLSSN + E + L NLQ LDLS
Sbjct: 114 IGQLQNLKRLFLSLNQLTSLPKEIGQLQNLQELDLSSNRFTTLPKE-IGQLQNLQELDLS 172
Query: 87 GNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
GNQ TTL + L NL+ LDL + TT+
Sbjct: 173 GNQ-FTTLPKEIGQLQNLQKLDLSNNRFTTL 202
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 71/125 (56%), Gaps = 10/125 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ LQ LDLS+N T + L NL++LDL G TT+ + + +L+NL+ L
Sbjct: 137 IGQLQNLQELDLSSNRFTTLPK----EIGQLQNLQELDLSGNQFTTLPKEIGQLQNLQKL 192
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI-Q 116
DLS+N + E + L +L+ LDLSGNQ TTL + N++ L+L +T++ +
Sbjct: 193 DLSNNRFTTLPKE-VGQLQSLEELDLSGNQ-FTTLPKEIRRRQNIRWLNLAGNQLTSLSK 250
Query: 117 GIQQF 121
I QF
Sbjct: 251 EIGQF 255
Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ L+ LDLS N T R N++ L+L G +T++ + + + +NL+ L
Sbjct: 206 VGQLQSLEELDLSGNQFTTLPKEIR----RRQNIRWLNLAGNQLTSLSKEIGQFQNLQGL 261
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
DLS N + E + L NL+ L+LSGN+
Sbjct: 262 DLSKNRFTTLPKE-IGQLQNLETLNLSGNR 290
>gi|332666302|ref|YP_004449090.1| adenylate cyclase [Haliscomenobacter hydrossis DSM 1100]
gi|332335116|gb|AEE52217.1| Adenylate cyclase [Haliscomenobacter hydrossis DSM 1100]
Length = 1448
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL NL NLK+L LD + I L K L LDLS+N ++ L LT LQ LDL
Sbjct: 336 GLDNLKNLKRLYLDCLDLKEIPSLVTFKQLAHLDLSNNQI--SEIKNLDKLTQLQSLDLG 393
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L L++LDL I+ I+ + + T
Sbjct: 394 NNQISEIKNFDKLTQLQSLDLGINQISEIKNLDKLT 429
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
LT L+ LDL I+ I+ L KL L++LDL SN ++ L LT LQ LDL NQ
Sbjct: 406 LTQLQSLDLGINQISEIKNLDKLTQLQSLDLGSNQI--SEIKNLDKLTQLQSLDLGINQI 463
Query: 91 LTTLGLANLPNLKTLDLRDCGITTI 115
L L L++LDLR+ I+ I
Sbjct: 464 SEIKNLNKLTQLQSLDLRNNQISEI 488
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 64/136 (47%), Gaps = 16/136 (11%)
Query: 1 LANLR--YLQVLDLSANYN-ITSGSLTRLGLAN-----------LTNLKKLDLDGCGITT 46
L NL+ YL LDL + +T L L L+N LT L+ LDL I+
Sbjct: 340 LKNLKRLYLDCLDLKEIPSLVTFKQLAHLDLSNNQISEIKNLDKLTQLQSLDLGNNQISE 399
Query: 47 IQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLD 106
I+ KL L++LDL N ++ L LT LQ LDL NQ L L L++LD
Sbjct: 400 IKNFDKLTQLQSLDLGINQI--SEIKNLDKLTQLQSLDLGSNQISEIKNLDKLTQLQSLD 457
Query: 107 LRDCGITTIQGIQQFT 122
L I+ I+ + + T
Sbjct: 458 LGINQISEIKNLNKLT 473
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 37 LDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEG----------------LANLTN 79
LDL G+T I + + LK+L+ L+L ++YY+ G E LA L N
Sbjct: 23 LDLGNLGLTEIPEEVYGLKHLKCLNLGTHYYVEGEWEKSKNKGNANYISHLDTRLAELEN 82
Query: 80 LQVLDLSGNQNLTTLGLAN-LPNLKTLDLRDCGITTIQGI 118
L+ L L+ N +T LA+ LPNLK LDL I I
Sbjct: 83 LEALTLAENP-ITACQLASILPNLKVLDLSYAQIKNHHSI 121
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 54/122 (44%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L LQ LDL N +L +L T L+ LDL I+ I L L L +L
Sbjct: 447 LDKLTQLQSLDLGINQISEIKNLNKL-----TQLQSLDLRNNQISEINNLITLIQLRSLS 501
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
L N ++ L L LQ LD NQ L L L++LD+R I+ I+ + +
Sbjct: 502 LWGNQI--SEIKNLDKLAQLQSLDFDSNQIREISNLDKLTQLQSLDIRRNQISEIKNLDK 559
Query: 121 FT 122
T
Sbjct: 560 LT 561
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 15 NYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
N N S TRL A L NL+ L L IT Q + L NL+ LDLS Y + +
Sbjct: 66 NANYISHLDTRL--AELENLEALTLAENPITACQLASILPNLKVLDLS--YAQIKNHHSI 121
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
+L +LQVL LSGN+ L L LP+ L L+ I+
Sbjct: 122 FDLKHLQVLRLSGNR-LNDLSF--LPDEPYLSLQHLDIS 157
>gi|417770611|ref|ZP_12418517.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Pomona]
gi|409947383|gb|EKN97381.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Pomona]
gi|455665930|gb|EMF31412.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
str. Fox 32256]
Length = 377
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 7/103 (6%)
Query: 18 ITSGSLTRLG--LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGL 74
+ S LT L + L NL+ L+L +TT+ + + +L+NL++LDL SN E +
Sbjct: 237 LVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKE-I 295
Query: 75 ANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGITTI 115
L NLQVLDL NQ LTTL G+ L NL+TLDL +TT+
Sbjct: 296 GQLKNLQVLDLGSNQ-LTTLPEGIGQLKNLQTLDLDSNQLTTL 337
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ LQ L+L N T + L NLK LDL +TT + + +LKNL+ L
Sbjct: 249 IGQLKNLQTLNLRNNRLTTLSK----EIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVL 304
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITT 114
DL SN L EG+ L NLQ LDL NQ LTTL + L NL+ L L + +++
Sbjct: 305 DLGSNQ-LTTLPEGIGQLKNLQTLDLDSNQ-LTTLPQEIGQLQNLQELFLNNNQLSS 359
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 68/140 (48%), Gaps = 30/140 (21%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ L+ L+LS N T + L L+ L LD +TT+ Q + +L+NL++L
Sbjct: 157 IGQLKNLKSLNLSYNQIKTIPK----KIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 212
Query: 60 DLSSN------------------YYLHGSLEGLAN----LTNLQVLDLSGNQNLTTLG-- 95
DLS+N Y + L L N L NLQ L+L N+ LTTL
Sbjct: 213 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNR-LTTLSKE 271
Query: 96 LANLPNLKTLDLRDCGITTI 115
+ L NLK+LDLR +TT
Sbjct: 272 IEQLQNLKSLDLRSNQLTTF 291
>gi|343416336|emb|CCD20397.1| leucine-rich repeat protein (LRRP), protein [Trypanosoma vivax
Y486]
Length = 1138
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
Query: 2 ANLRYLQVLDLSANYNITSGSLTRLGLANL---TNLKKLDLDGCGITTIQGLAKLKNLEA 58
N YL + + + + L+R L L T+L+ L L C T + L +K LE
Sbjct: 813 VNAHYLFSEEKPSEFRLQMMKLSRDFLNALKLNTHLRTLVLYRCTFTNVSPLGDIKTLEV 872
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGN--QNLTTLGLANLPNLKTLDLRDCGITTIQ 116
LDL + L+ L L L+ L L+ +N GLA L +L++L L CGIT +
Sbjct: 873 LDLDGCSRIKKGLDKLHTLVGLKTLRLTSRSVRNSFLKGLAKLKHLRSLSLTRCGITDVS 932
Query: 117 GI 118
G+
Sbjct: 933 GL 934
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GLA L +L+ L L CGIT + GL + LEALDLS ++ + + +L+ L L
Sbjct: 911 GLAKLKHLRSLSLTRCGITDVSGLGCIHWLEALDLSYCTKINKGSRCIGEIKSLKELTLR 970
Query: 87 GNQNLTTL--GLANLPNLKTLDLRDC-GITTI 115
G + L L L+ L L+ C G+T +
Sbjct: 971 GCRIYYPLFYALDGSDTLRKLSLKYCEGLTDV 1002
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 57/124 (45%), Gaps = 18/124 (14%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-----GITTIQGLAKLKNLEALDL 61
LQ L L NIT S L++L +L LD+ C G GL LK L L+
Sbjct: 423 LQALVLHRCSNITDIS----PLSDLQSLVSLDIRECMNIVEGWNCFMGLRMLKMLHLLEA 478
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSGNQNLT-TLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ + SL LA T LQVL L N+T T L + L+ LD+R+C GI Q
Sbjct: 479 RIS---NDSLRSLAACTQLQVLVLHRCNNITDTSLLGSFQYLQVLDVRECS-----GISQ 530
Query: 121 FTSY 124
+Y
Sbjct: 531 GCAY 534
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 16 YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNL---EALDLSSNYYLHGSLE 72
Y T +++ LG ++ L+ LDLDGC +GL KL L + L L+S + L+
Sbjct: 854 YRCTFTNVSPLG--DIKTLEVLDLDGCSRIK-KGLDKLHTLVGLKTLRLTSRSVRNSFLK 910
Query: 73 GLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDC 110
GLA L +L+ L L+ GL + L+ LDL C
Sbjct: 911 GLAKLKHLRSLSLTRCGITDVSGLGCIHWLEALDLSYC 948
>gi|332031266|gb|EGI70800.1| Protein toll [Acromyrmex echinatior]
Length = 1016
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 31 LTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
L LK LDL+G + + AKL+NLE L+LS N + H L N T L + L N
Sbjct: 174 LIALKSLDLNGNNMIKLPDDIFAKLENLEVLNLSRNNFTHLPRNLLQNNTKLYTVSLFDN 233
Query: 89 Q-NLTTLG---LANLPNLKTLDLRDCGITTI 115
+ N+TTL ANL LK L LR G T+
Sbjct: 234 KRNMTTLPNKFFANLTELKVLKLRKNGFVTL 264
>gi|47096525|ref|ZP_00234116.1| internalin E [Listeria monocytogenes str. 1/2a F6854]
gi|254913501|ref|ZP_05263513.1| internalin E [Listeria monocytogenes J2818]
gi|254937918|ref|ZP_05269615.1| internalin E [Listeria monocytogenes F6900]
gi|386045908|ref|YP_005964240.1| internalin E [Listeria monocytogenes J0161]
gi|47015116|gb|EAL06058.1| internalin E [Listeria monocytogenes str. 1/2a F6854]
gi|258610527|gb|EEW23135.1| internalin E [Listeria monocytogenes F6900]
gi|293591509|gb|EFF99843.1| internalin E [Listeria monocytogenes J2818]
gi|345532899|gb|AEO02340.1| internalin E [Listeria monocytogenes J0161]
Length = 499
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T LG A++T+ + + DLD GITTI+GL L NL L+L N L L
Sbjct: 57 TLLGKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTD--LNPL 114
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN LA L NLKT+DL IT +
Sbjct: 115 TNLTKITELELSGNPLKDVSALAGLKNLKTMDLIYTDITDV 155
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
LA L NLK +DL IT + LA L NL+ L+L N + LA L+NLQ L
Sbjct: 135 ALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITD--ITPLAGLSNLQFLSFG 192
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
Q LANL L TL+ + ++ + +
Sbjct: 193 STQVSDLTPLANLSKLTTLNAMNSKVSDVSPL 224
>gi|46447466|ref|YP_008831.1| hypothetical protein pc1832 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401107|emb|CAF24556.1| hypothetical protein pc1832 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 456
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 62/134 (46%), Gaps = 18/134 (13%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L N + L+VLDL +N T L L LT L+ LDL GC T GLA L L AL
Sbjct: 244 LKNCKNLKVLDLQECWNFTDAGLAHL--TPLTALQHLDLTGCFRVTDTGLAHLSPLVALQ 301
Query: 60 -------DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRD 109
DL+ +H L L L+ LDL NLT GLA+L L+ L+L +
Sbjct: 302 HLNLIGCDLTDAGLVH-----LKPLIALKHLDLMRCWNLTDAGLAHLRPLVALQHLNLTN 356
Query: 110 CGITTIQGIQQFTS 123
C T G+ T
Sbjct: 357 CENITDVGLAHLTP 370
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL---DLSS 63
L+ LDL +N+T L L L L+ L+L C T GLA L L AL DL
Sbjct: 324 LKHLDLMRCWNLTDAGLAHLR--PLVALQHLNLTNCENITDVGLAHLTPLVALKHLDLMQ 381
Query: 64 NYYLHGS-LEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQGIQ 119
+ L G+ L L +L LQ L+LSG LT GLA+L L+ LDL +C T G+
Sbjct: 382 CWKLTGNGLARLRSLVALQHLNLSGCSYLTDAGLAHLRPLVALQHLDLANCYELTDAGLA 441
Query: 120 QF 121
F
Sbjct: 442 HF 443
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA---LDLSS 63
++ L+ S N ++T L L L N NLK LDL C T GLA L L A LDL+
Sbjct: 225 IEALNFSNNADLTDAHL--LALKNCKNLKVLDLQECWNFTDAGLAHLTPLTALQHLDLTG 282
Query: 64 NYYLHGS-LEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQGI 118
+ + + L L+ L LQ L+L G +LT GL +L LK LDL C T G+
Sbjct: 283 CFRVTDTGLAHLSPLVALQHLNLIGC-DLTDAGLVHLKPLIALKHLDLMRCWNLTDAGL 340
>gi|417779576|ref|ZP_12427359.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
gi|410780288|gb|EKR64884.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
Length = 560
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L +L+NL +L+L+G IT +Q LAKLKNLE L +S ++E + +L L+ L + G
Sbjct: 402 LTSLSNLNRLELEGTLITDLQPLAKLKNLEYLQISGTSV--KNIEPIISLGQLRTLKIQG 459
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITT 114
L L L LD+ D I +
Sbjct: 460 THVKDISRLKELKYLSDLDISDTKIDS 486
Score = 39.7 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L N+ LKKL L+ I + L L NL L+L L L+ LA L NL+ L +SG
Sbjct: 380 LKNVIKLKKLILNDTKINDLSPLTSLSNLNRLELEGT--LITDLQPLAKLKNLEYLQISG 437
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
+ +L L+TL ++ + I +++
Sbjct: 438 TSVKNIEPIISLGQLRTLKIQGTHVKDISRLKEL 471
>gi|356561564|ref|XP_003549051.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
FLS2-like [Glycine max]
Length = 967
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 14/133 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI--QGLAKLKNLEA 58
L L+YL LDLS+NY + + + LG +L +L+ LDL G + L L NL+
Sbjct: 103 LLELKYLNRLDLSSNYFVLTPIPSFLG--SLESLRYLDLSLSGFMGLIPHQLGNLSNLQH 160
Query: 59 LDLSSNYYLH-GSLEGLANLTNLQVLDLSGNQNLTTLG-----LANLPNLKTLDLRDCGI 112
L+L NY L +L ++ L++L+ LDLSG+ +L G L+ LP+L L L C I
Sbjct: 161 LNLGYNYALQIDNLNWISRLSSLEYLDLSGS-DLHKQGNWLQVLSALPSLSELHLESCQI 219
Query: 113 TTI---QGIQQFT 122
+ +G FT
Sbjct: 220 DNLGPPKGKTNFT 232
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 26/112 (23%)
Query: 3 NLRYLQVLDLSAN-----------------------YNITSGSLTRLGLANLTNLKKLDL 39
N +LQVLDLS N N+ G + ++ +++L N+K LDL
Sbjct: 230 NFTHLQVLDLSINNLNQQIPSWLFNLSTTLVQLDLHSNLLQGQIPQI-ISSLQNIKNLDL 288
Query: 40 DGCGIT--TIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
++ L +LK+LE L+LS+N + ANL++L+ L+L+ N+
Sbjct: 289 QNNQLSGPLPDSLGQLKHLEVLNLSNNTFTCPIPSPFANLSSLRTLNLAHNR 340
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI----TTIQGLAKLKNL 56
L NL LQ L+L NY + +L ++ L++L+ LDL G + +Q L+ L +L
Sbjct: 152 LGNLSNLQHLNLGYNYALQIDNLN--WISRLSSLEYLDLSGSDLHKQGNWLQVLSALPSL 209
Query: 57 EALDLSSNYYLH-GSLEGLANLTNLQVLDLSGN 88
L L S + G +G N T+LQVLDLS N
Sbjct: 210 SELHLESCQIDNLGPPKGKTNFTHLQVLDLSIN 242
>gi|193883426|gb|ACF28193.1| hypothetical protein CG12283, partial [Drosophila melanogaster]
Length = 210
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSNY 65
QVLD+S N + + S + ANL NL+KL L C I I+ L NL LDLS N
Sbjct: 81 QVLDMSGN-KLQTLSNEQFIRANLLNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNL 139
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTI 115
+ L ++ +L+ L L+ N + + N P+L LDL C I TI
Sbjct: 140 LVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNTPSLHKLDLSHCDIQTI 191
>gi|332271215|gb|AEE38254.1| soluble toll-like receptor 5 [Salmo salar]
Length = 462
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 23 LTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSNYYLHGSLEGLANLTNL 80
+ R L NL++L+L I I L N+ LDLS N+ + L NL
Sbjct: 136 IDRGAFWGLENLQRLNLSHNLIGEIYSYTFDNLPNILELDLSYNHIGALGYQAFTGLPNL 195
Query: 81 QVLDLSGN--QNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
Q+LDL+GN + L T G LA LPNL+ L L D IT+++G+ F
Sbjct: 196 QILDLTGNSIRQLGTYGYLAPLPNLQLLHLADNKITSLEGLLGFA 240
>gi|357130425|ref|XP_003566849.1| PREDICTED: receptor-like protein 12-like [Brachypodium distachyon]
Length = 983
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 65/133 (48%), Gaps = 23/133 (17%)
Query: 1 LANLRYLQVLDLSAN-YNITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNLE 57
L LR+L+ +DLS N +N TS + + +L NL+ L+L G + L L LE
Sbjct: 110 LVTLRHLRYMDLSGNEFNGTS---IPVFVGSLANLRYLNLSWAGFSGRLPPQLGNLSYLE 166
Query: 58 ALDLSSNYYLHG-----------SLEGLANLTNLQVLDLSGNQNLTT----LGLAN-LPN 101
LDLS NYY G L L L++L LD+ G NL+ + + N LP
Sbjct: 167 YLDLSWNYYFDGLNWTSLYLYIVDLTWLPRLSSLSHLDM-GQVNLSAARDWVHMVNMLPA 225
Query: 102 LKTLDLRDCGITT 114
LK L L DC + T
Sbjct: 226 LKVLRLDDCSLDT 238
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 58/126 (46%), Gaps = 16/126 (12%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--------GLANLTNLKKLDLDGCGITTIQGLAK 52
L NL YL+ LDLS NY + T L L L++L LD+ ++ +
Sbjct: 159 LGNLSYLEYLDLSWNYYFDGLNWTSLYLYIVDLTWLPRLSSLSHLDMGQVNLSAARDWVH 218
Query: 53 LKN-LEALDL----SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL---GLANLPNLKT 104
+ N L AL + + S +NLT+LQVLDLS N TTL +L +LK
Sbjct: 219 MVNMLPALKVLRLDDCSLDTTASATSQSNLTHLQVLDLSNNDFSTTLKRNWFWDLTSLKE 278
Query: 105 LDLRDC 110
L L C
Sbjct: 279 LYLFAC 284
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI--QGLAKLKNLEALDLSSN 64
LQVLD++ Y +G L + + N+++ L L IT I QG+ L N++ LDLS N
Sbjct: 353 LQVLDMT--YANMTGELP-IWIGNMSSFSILLLPDNMITGIIPQGIGTLGNIKTLDLSYN 409
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQ 89
++ GL +L L LDLS N+
Sbjct: 410 NFIGPVPTGLGSLHKLASLDLSYNK 434
>gi|21655205|gb|AAM28917.1| putative TIR/NBS/LRR disease resistance protein [Pinus taeda]
Length = 987
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 21 GSLTRLG--LANLTNLKKLDLDGCGITTI--QGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
GSL L NLTNL+ +D+ C + LKNL+ +DLSS L N
Sbjct: 826 GSLCVLPELFGNLTNLQTIDISCCSSLKVLPDSFGNLKNLQTIDLSSCASLQLLPGSFGN 885
Query: 77 LTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDC 110
LTNLQ +DLS +L L NL NL+T++L C
Sbjct: 886 LTNLQTIDLSSCDSLLVLPDSFGNLTNLQTINLSGC 921
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQG-LAKLKNLEA 58
NL LQ +D+S +S + NL NL+ +DL C + + G L NL+
Sbjct: 835 FGNLTNLQTIDISC---CSSLKVLPDSFGNLKNLQTIDLSSCASLQLLPGSFGNLTNLQT 891
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG 95
+DLSS L + NLTNLQ ++LSG L L
Sbjct: 892 IDLSSCDSLLVLPDSFGNLTNLQTINLSGCTRLQVLA 928
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 28 LANLTNLKKLDLDG------CGITT-----IQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
L +L +LK L+L G CG + L NL+ + L S L + + N
Sbjct: 730 LWHLQSLKHLELVGGLLPHRCGACSSMNILPDSFGNLTNLQTITLHSWSNLRVLPDSIGN 789
Query: 77 LTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCG 111
LTNLQ + + ++L L NL NLKT+ L CG
Sbjct: 790 LTNLQTIQMYRXESLQVLPDSFGNLTNLKTIKLSQCG 826
>gi|397644745|gb|EJK76531.1| hypothetical protein THAOC_01703, partial [Thalassiosira oceanica]
Length = 331
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L TNL L L G I+GL L L L L N +EGL LT+L LDLSG
Sbjct: 34 LDEYTNLTSLWLHSNGFARIEGLDNLPQLRCLFLQENAITR--IEGLERLTSLVQLDLSG 91
Query: 88 NQNLTTLGLANLPNLKTLDL 107
N GL++LPNL TL+L
Sbjct: 92 NSIRFVEGLSHLPNLATLNL 111
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L NL L+ L L N ++TR+ GL LT+L +LDL G I ++GL+ L NL L
Sbjct: 56 LDNLPQLRCLFLQEN------AITRIEGLERLTSLVQLDLSGNSIRFVEGLSHLPNLATL 109
Query: 60 DLSSNYYLHG-SLEGLANLTNLQVLDLSGNQ 89
+L+ N S+ L L LDLS N+
Sbjct: 110 NLAKNVLADASSISHLKECRKLSALDLSKNE 140
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL NL L+ L L IT I+GL +L +L LDLS N +EGL++L NL L+L+
Sbjct: 55 GLDNLPQLRCLFLQENAITRIEGLERLTSLVQLDLSGNSIRF--VEGLSHLPNLATLNLA 112
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQG 117
N +++L + L D ++G
Sbjct: 113 KNVLADASSISHLKECRKLSALDLSKNELEG 143
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 66 YLH----GSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
YLH S+E L TNL L L N GL NLP L+ L L++ IT I+G+++
Sbjct: 22 YLHCKGYRSIENLDEYTNLTSLWLHSNGFARIEGLDNLPQLRCLFLQENAITRIEGLERL 81
Query: 122 TS 123
TS
Sbjct: 82 TS 83
>gi|348580363|ref|XP_003475948.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein
1-like [Cavia porcellus]
Length = 1665
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NL+ L L CG+T++ GL+ KNL+ +D N+ + E L NL V+ L+
Sbjct: 811 LTECVNLQFLSLRRCGLTSLYGLSNCKNLKYIDAQENHIESINCE---QLENLSVVLLNK 867
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
NQ + GL N+++L+L IT I G++
Sbjct: 868 NQLTSFHGLDGCTNIQSLELSHNKITRIGGLESL 901
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+N + L+ +D N+ + + L NL + L+ +T+ GL N+++L+
Sbjct: 833 LSNCKNLKYIDAQENH------IESINCEQLENLSVVLLNKNQLTSFHGLDGCTNIQSLE 886
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
LS N + GL +L NLQ L + NQ ++T GL + P + LD +T ++GI+
Sbjct: 887 LSHNKITR--IGGLESLKNLQQLIVDHNQLISTEGLRDTPTVIYLDCSYNNLTDVKGIE 943
Score = 42.4 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 12/119 (10%)
Query: 7 LQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY 65
+Q L+LS N +TR+G L +L NL++L +D + + +GL + LD S N
Sbjct: 882 IQSLELSHN------KITRIGGLESLKNLQQLIVDHNQLISTEGLRDTPTVIYLDCSYNN 935
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
++G+ N LQVL L GN L N L+ L L D I+T +++F+SY
Sbjct: 936 LT--DVKGIENCGLLQVLKLQGNYLSKPPSLGNHVLLRELHLDDNSIST---MEEFSSY 989
>gi|456823237|gb|EMF71707.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 391
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 7/103 (6%)
Query: 18 ITSGSLTRLG--LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGL 74
+ S LT L + L NL+ L+L +TT+ + + +L+NL++LDL SN E +
Sbjct: 239 LVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKE-I 297
Query: 75 ANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGITTI 115
L NLQVLDL NQ LTTL G+ L NL+TLDL +TT+
Sbjct: 298 GQLKNLQVLDLGSNQ-LTTLPEGIGQLKNLQTLDLDSNQLTTL 339
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 67/127 (52%), Gaps = 10/127 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ LQ L+L N T + L NLK LDL +T + + +LKNL+ L
Sbjct: 251 IGQLKNLQTLNLRNNRLTTLSK----EIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVL 306
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTIQG 117
DL SN L EG+ L NLQ LDL NQ LTTL + L NL+ L L + +++ Q
Sbjct: 307 DLGSNQ-LTTLPEGIGQLKNLQTLDLDSNQ-LTTLPQEIGQLQNLQELFLNNNQLSS-QE 363
Query: 118 IQQFTSY 124
++F ++
Sbjct: 364 KKEFENF 370
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 9/118 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ L+ L+LS N T + L L+ L LD +TT+ Q + +L+NL++L
Sbjct: 159 IGQLKNLKSLNLSYNQIKTIPK----EIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 214
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
DLS+N L + + +L NLQ L L NQ LT L + L NL+TL+LR+ +TT+
Sbjct: 215 DLSTN-RLTTLPQEIGHLQNLQDLYLVSNQ-LTILPNEIGQLKNLQTLNLRNNRLTTL 270
>gi|242078575|ref|XP_002444056.1| hypothetical protein SORBIDRAFT_07g006470 [Sorghum bicolor]
gi|241940406|gb|EES13551.1| hypothetical protein SORBIDRAFT_07g006470 [Sorghum bicolor]
Length = 1010
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNLEA 58
L +L YL+ +DLS+N L ++ N+K L+L G T L L NL+
Sbjct: 105 LLSLEYLEHMDLSSNSLTGPHGCIPQFLGSMKNMKYLNLSGIPFTGGVAPQLGNLSNLQY 164
Query: 59 LDLSSNYYLHGS-LEGLANLTNLQVLDLSGNQNLTTLG-----LANLPNLKTLDLRDCGI 112
LDL YYL+ + + L NL LQ LD+S NL+ + L +P+L+ + L C +
Sbjct: 165 LDLGRQYYLYSADITWLTNLPLLQYLDMS-YVNLSGIADWPQKLNMVPSLRVIRLTSCSL 223
Query: 113 -TTIQGIQQF 121
TT Q + F
Sbjct: 224 DTTNQSLSHF 233
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLT----RLGLANLTNLKKLDLDGCGIT-TIQGL-AKLK 54
L NL L++LDLS YN SG +T RL + L+ L+LD +T T+ L
Sbjct: 319 LNNLCSLEILDLS--YNYMSGDMTIFTGRLPQCSWDKLQHLNLDSNNLTGTLPNLIGHFI 376
Query: 55 NLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRD 109
+L L +S+N GL N T+L +LDL N+ ++ + +L L +LDLR+
Sbjct: 377 SLSVLVISNNNLTGTIPAGLGNCTHLTILDLYCNKISGSVPTEIGSLSKLTSLDLRN 433
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLT--NLKKLDLDGCGITTIQGLAKLKNLE 57
L N +L +LDL N I+ T +G L+ LT +L+ +L G T I G + NL
Sbjct: 396 LGNCTHLTILDLYCN-KISGSVPTEIGSLSKLTSLDLRNNNLSGGVPTQIGGCS---NLT 451
Query: 58 ALDLSSNYYLHGSL--EGLANLTNLQVLDLSGNQNL 91
LD+S+NY L G + E L +L+ LDLS N+NL
Sbjct: 452 FLDVSNNY-LSGVIMEEHFEGLISLKKLDLSSNKNL 486
>gi|348688896|gb|EGZ28710.1| hypothetical protein PHYSODRAFT_322345 [Phytophthora sojae]
Length = 683
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 71/137 (51%), Gaps = 20/137 (14%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG---LANLTNLKKLDLDGC------GITTIQGLA 51
LA L++L L+L + G+LT G LA +T+L L+L C GI+++ L
Sbjct: 274 LARLKHLTTLNL---WYANQGNLTDDGISALAGVTSLTSLNLSNCSQLTDVGISSLGALV 330
Query: 52 KLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG---LANLPNLKTLDLR 108
L++LE ++ L+ LA L +L LD++G N+T G LAN PNL + +L
Sbjct: 331 NLRHLEFANVGE--VTDNGLKALAPLVDLITLDIAGCYNITDAGTSVLANFPNLSSCNLW 388
Query: 109 DC---GITTIQGIQQFT 122
C G TT + ++ T
Sbjct: 389 YCSEIGDTTFEHMESLT 405
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITT--IQGLAKLKNLE 57
++ LR L LD+ + +N+T L L L LK L L GC GI I L++LK+L
Sbjct: 426 ISKLRNLTSLDMVSCFNVTDDGLNEL--VGLHRLKSLYLGGCSGIRDDGIAALSQLKSLV 483
Query: 58 ALDLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLG---LANLPNLKTLDLRDCGIT 113
LDLS+ + + +L GL L NL L+L + G LA L LKTL+L +C +
Sbjct: 484 ILDLSNCRQVGNKALLGLGELHNLTNLNLMRCNRIDDEGIAYLAGLKRLKTLNLSNCRLL 543
Query: 114 T 114
T
Sbjct: 544 T 544
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 34/150 (22%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC------GITTIQGLAKLK 54
L+ L+ L +LDLS + + +L LGL L NL L+L C GI + GL +LK
Sbjct: 476 LSQLKSLVILDLSNCRQVGNKAL--LGLGELHNLTNLNLMRCNRIDDEGIAYLAGLKRLK 533
Query: 55 NL-----------------EALDLSS------NYYLHGSLEGLANLTNLQVLDLSGNQNL 91
L + +L S N + LA+LT LQ +DL+ L
Sbjct: 534 TLNLSNCRLLTDAATTTIAQMTELESIVLWYCNKLTDTGVMNLASLTKLQSIDLASCSKL 593
Query: 92 TTLGLA---NLPNLKTLDLRDCGITTIQGI 118
T L+ ++P L +LDL +C + T +G+
Sbjct: 594 TDACLSTFPSIPKLTSLDLGNCCLLTDEGM 623
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 30/140 (21%)
Query: 1 LANLRYLQVLDLSANYNITS-----------------------GSLTRLGLANLTNLKKL 37
LA L L LD++ YNIT G T + +LT ++ L
Sbjct: 351 LAPLVDLITLDIAGCYNITDAGTSVLANFPNLSSCNLWYCSEIGDTTFEHMESLTKMRFL 410
Query: 38 DLDGCGITTIQGL---AKLKNLEALDLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTT 93
+ CG T +GL +KL+NL +LD+ S + + L L L L+ L L G +
Sbjct: 411 NFMKCGKVTDKGLRSISKLRNLTSLDMVSCFNVTDDGLNELVGLHRLKSLYLGGCSGIRD 470
Query: 94 LGLANLPNLKT---LDLRDC 110
G+A L LK+ LDL +C
Sbjct: 471 DGIAALSQLKSLVILDLSNC 490
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 13/102 (12%)
Query: 29 ANLTNLKKLDLDGC---GITTIQGLAKLKNLEALDLSSNYYLHGSL-----EGLANLTNL 80
ANL L L L GC G I+ LA+LK+L L+L Y G+L LA +T+L
Sbjct: 250 ANLPKLNYLSLRGCSQVGDIGIRELARLKHLTTLNLW--YANQGNLTDDGISALAGVTSL 307
Query: 81 QVLDLSGNQNLTTLGLAN---LPNLKTLDLRDCGITTIQGIQ 119
L+LS LT +G+++ L NL+ L+ + G T G++
Sbjct: 308 TSLNLSNCSQLTDVGISSLGALVNLRHLEFANVGEVTDNGLK 349
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLA---KLKNLE 57
LA+L LQ +DL++ +T L+ ++ L LDL C + T +G+A K+ +L
Sbjct: 576 LASLTKLQSIDLASCSKLTDACLSTF--PSIPKLTSLDLGNCCLLTDEGMATLGKVTSLT 633
Query: 58 ALDLSS-NYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLP 100
+L+LS L LA L NL ++L +T G+ +LP
Sbjct: 634 SLNLSECGEITDAGLAHLAALVNLTNINLWYCTKVTKTGIDHLP 677
>gi|315302003|ref|ZP_07872989.1| internalin A, partial [Listeria ivanovii FSL F6-596]
gi|313629628|gb|EFR97775.1| internalin A [Listeria ivanovii FSL F6-596]
Length = 490
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 66/132 (50%), Gaps = 20/132 (15%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCG-ITTIQGLAKLKNLEA 58
+A L Y++ L + T S+T L LANLTNL +D DG I ++ L L NLE
Sbjct: 90 IAGLEYMENL---TTIDFTYCSVTDLSPLANLTNLIYVDFDGNNNIVDLEPLKGLINLET 146
Query: 59 LDLSSNYYLHGSLEG--------LANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDC 110
L+L G+ +G LANLT L+ LDL GN + L L NL+ LD+ +
Sbjct: 147 LNL-------GAFDGNSIVDISPLANLTKLKRLDLEGNNIVDVTPLKGLTNLENLDIYNN 199
Query: 111 GITTIQGIQQFT 122
I+ I + T
Sbjct: 200 EISDICALNSLT 211
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 30 NLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
+L ++K L D GI+ I GL ++NL +D + Y L LANLTNL +D GN
Sbjct: 73 DLDSIKVLQCDSSGISDIAGLEYMENLTTIDFT--YCSVTDLSPLANLTNLIYVDFDGNN 130
Query: 90 NLTTL-GLANLPNLKTLDL 107
N+ L L L NL+TL+L
Sbjct: 131 NIVDLEPLKGLINLETLNL 149
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT LK+LDL+G I + L L NLE LD+ +N + L +LTNL L L
Sbjct: 163 LANLTKLKRLDLEGNNIVDVTPLKGLTNLENLDIYNNEI--SDICALNSLTNLTSLFLGA 220
Query: 88 N--QNLTTLGLANLPNLKTLDLR 108
N ++LT+L ++ L TL+ R
Sbjct: 221 NTIEDLTSLN--SMQKLTTLEAR 241
>gi|193883400|gb|ACF28180.1| hypothetical protein CG12283, partial [Drosophila melanogaster]
gi|193883402|gb|ACF28181.1| hypothetical protein CG12283, partial [Drosophila melanogaster]
gi|193883404|gb|ACF28182.1| hypothetical protein CG12283, partial [Drosophila melanogaster]
gi|193883406|gb|ACF28183.1| hypothetical protein CG12283, partial [Drosophila melanogaster]
gi|193883408|gb|ACF28184.1| hypothetical protein CG12283, partial [Drosophila melanogaster]
gi|193883410|gb|ACF28185.1| hypothetical protein CG12283, partial [Drosophila melanogaster]
gi|193883412|gb|ACF28186.1| hypothetical protein CG12283, partial [Drosophila melanogaster]
gi|193883414|gb|ACF28187.1| hypothetical protein CG12283, partial [Drosophila melanogaster]
gi|193883416|gb|ACF28188.1| hypothetical protein CG12283, partial [Drosophila melanogaster]
gi|193883418|gb|ACF28189.1| hypothetical protein CG12283, partial [Drosophila melanogaster]
gi|193883422|gb|ACF28191.1| hypothetical protein CG12283, partial [Drosophila melanogaster]
gi|193883424|gb|ACF28192.1| hypothetical protein CG12283, partial [Drosophila melanogaster]
Length = 192
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSNY 65
QVLD+S N + + S + ANL NL+KL L C I I+ L NL LDLS N
Sbjct: 81 QVLDMSGN-KLQTLSNEQFIRANLLNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNL 139
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTI 115
+ L ++ +L+ L L+ N + + N P+L LDL C I TI
Sbjct: 140 LVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNTPSLHKLDLSHCDIQTI 191
>gi|185132261|ref|NP_001118216.1| membrane-Toll-like receptor 5 precursor [Oncorhynchus mykiss]
gi|51699280|dbj|BAD38860.1| membrane-Toll-like receptor 5 [Oncorhynchus mykiss]
Length = 879
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 23 LTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSNYYLHGSLEGLANLTNL 80
+ R L N++KL+L I I L N+ LD+S N+ + L NL
Sbjct: 330 IDREAFFGLQNVQKLNLSHNLIGEIYSYTFDNLPNILELDISYNHIGALGYQAFKGLPNL 389
Query: 81 QVLDLSGN--QNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFTS 123
QVLDL+GN + L T G LA LPN++ L L D IT+++G+ F
Sbjct: 390 QVLDLTGNSIRGLGTYGSLAPLPNIQLLRLADNKITSLEGLSVFAP 435
>gi|297458215|ref|XP_002684079.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
protein 31 [Bos taurus]
gi|297471135|ref|XP_002684987.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
protein 31 [Bos taurus]
gi|296491198|tpg|DAA33271.1| TPA: leucine rich repeat containing 31 [Bos taurus]
Length = 564
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 61/120 (50%), Gaps = 26/120 (21%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L L+ +VLDLS N NI GSL + GL + +NLK L L CG++ K+++
Sbjct: 227 LPRLQNPEVLDLSINRNI-GGSLNSIAHGLKSTSNLKVLKLHSCGLSQ-------KSVKL 278
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL-----TTLGLANLPNLKTLDLRDCGIT 113
LD + Y L L+ LDLS N+ L GLA L +L+ LD+R C +T
Sbjct: 279 LDAAFRY-----------LCELRTLDLSCNKELGGGFEDITGLATLXSLEGLDVRQCSLT 327
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 2 ANLRYL---QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT------IQGLAK 52
A RYL + LDLS N + G GLA L +L+ LD+ C +T Q +
Sbjct: 281 AAFRYLCELRTLDLSCNKELGGGFEDITGLATLXSLEGLDVRQCSLTADDVLSLTQVIPL 340
Query: 53 LKNLEALDLSSNY----YLHGSLEGLANLTNLQVLDLSG----NQNLTTLGLA--NLPNL 102
L +L+ LDLS+N Y L L L L+ L +S ++ T L A +LP L
Sbjct: 341 LSSLQELDLSANKEMGSYSENLLSRLRFLPALKSLIISNCALESKTFTALAEASIHLPAL 400
Query: 103 KTLDL 107
K ++L
Sbjct: 401 KIVNL 405
>gi|413949467|gb|AFW82116.1| hypothetical protein ZEAMMB73_510951 [Zea mays]
Length = 343
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 31/114 (27%)
Query: 32 TNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANL-TNLQVLDLSGN-- 88
++L LDL C ++ + L K+KNLE LDLS N G++E +A + TNLQ L L
Sbjct: 228 SSLIHLDLSSCKLSNLSFLEKMKNLEHLDLSYNIITDGAIEHIAKIGTNLQYLSLKNTGI 287
Query: 89 ------------QNLTTLGLAN-------------LPNLKTLDLRDCGITTIQG 117
NLT+L LAN +P L+T+DL T+I+G
Sbjct: 288 TSQALCILAGTVPNLTSLSLANTKIDDSALAYIGMIPLLRTIDLSQ---TSIKG 338
>gi|357518521|ref|XP_003629549.1| Disease resistance protein [Medicago truncatula]
gi|355523571|gb|AET04025.1| Disease resistance protein [Medicago truncatula]
Length = 766
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 11 DLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI--QGLAKLKNLEALDLSSNYYLH 68
DLS +Y +L G+ ++ +LKKL + C ++ Q + KL+NLE L L S L
Sbjct: 608 DLSMDYCKDMTALPN-GVCDIISLKKLSITNCHKLSLLPQEIGKLENLELLSLISCTDLV 666
Query: 69 GSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCG 111
+ + L+NL++LD+S +L++L NL NL+ LD+ C
Sbjct: 667 ELPDSIGRLSNLRLLDISNCISLSSLPEDFGNLCNLRNLDMTSCA 711
>gi|423409412|ref|ZP_17386561.1| hypothetical protein ICY_04097, partial [Bacillus cereus BAG2X1-3]
gi|401655354|gb|EJS72886.1| hypothetical protein ICY_04097, partial [Bacillus cereus BAG2X1-3]
Length = 776
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL + NL+KL L +T I +++L+ L+ LDLSSN L S++ ++NL NL +L L
Sbjct: 238 GLEYMKNLEKLTLRETNVTDISAISELRYLKFLDLSSN--LIESIQPVSNLENLDMLFLR 295
Query: 87 GNQNLTTLGLANLPNLKTLDL 107
N+ L+ + +KTLDL
Sbjct: 296 DNKIADLTPLSQMKKIKTLDL 316
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL + NL+ L L+G G+ I+ ++ LK L A+++S N + L++L NLQ L+L+
Sbjct: 586 GLEYMVNLESLTLEGVGLKNIEFISNLKQLNAMNVSHNQI--EDITPLSSLKNLQWLNLA 643
Query: 87 GNQNLTTLGLANLPNLKTLDL 107
N+ L ++ +L +L L
Sbjct: 644 DNRVKDVSVLGSMLDLISLKL 664
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 30 NLTNLKKLDL-DGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
+L +K L + G GI I GL +KNLE L L + ++ L L+ LDLS N
Sbjct: 218 DLLKIKTLTIYSGEGINEIAGLEYMKNLEKLTLRETNVT--DISAISELRYLKFLDLSSN 275
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ ++NL NL L LRD I + + Q
Sbjct: 276 LIESIQPVSNLENLDMLFLRDNKIADLTPLSQ 307
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
++ LRYL+ LDLS+N + ++ NL NL L L I + L+++K ++ LD
Sbjct: 261 ISELRYLKFLDLSSNLIESIQPVS-----NLENLDMLFLRDNKIADLTPLSQMKKIKTLD 315
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
L N L L + +++ L L+ NQ G+ L N+K L + + I+ ++ I +
Sbjct: 316 LIGNNI--KDLTPLFTVASVKELYLANNQISNLSGIEKLNNVKLLWIGNNQISDVEPISK 373
Query: 121 FT 122
+
Sbjct: 374 MS 375
>gi|46446665|ref|YP_008030.1| hypothetical protein pc1031 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400306|emb|CAF23755.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 553
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 56/104 (53%), Gaps = 10/104 (9%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL---DLSSN 64
Q LDLS + +T L L LT L+ LDL C T G+A LK L AL DLS
Sbjct: 322 QHLDLSQYWKLTDAGLAHLK--PLTALQHLDLSLCYYLTDAGIAHLKPLTALQHLDLSQ- 378
Query: 65 YYLHGSLEGLANLTNL---QVLDLSGNQNLTTLGLANLPNLKTL 105
Y + + GLA+LT L Q L+LS +NLT GLA+L L L
Sbjct: 379 -YRNLTDAGLAHLTPLMGLQYLNLSACKNLTDAGLAHLAPLTAL 421
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL- 59
L L LQ LDLS N+T L L L L+ L+L C T GLA L L AL
Sbjct: 365 LKPLTALQHLDLSQYRNLTDAGLAHL--TPLMGLQYLNLSACKNLTDAGLAHLAPLTALQ 422
Query: 60 --DLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGIT 113
+LSS Y L L L LT LQ L LS +NLT GLA+L L+ L+L +C
Sbjct: 423 HLNLSSCYNLTDAGLVHLIPLTALQHLYLSDWENLTDTGLAHLAPLTALQHLNLSNCRKL 482
Query: 114 TIQGIQQFTS 123
T G+ S
Sbjct: 483 TDDGLAHLKS 492
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 57/106 (53%), Gaps = 6/106 (5%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD-LS 62
L+ ++ L+ S N +T L L L + NLK L C T GLA L L AL L
Sbjct: 193 LKKIETLNFSDNAYLTDAHL--LALKDCENLKVLHCKKCWGVTDAGLAHLTPLTALQRLD 250
Query: 63 SNYYLHGSLEGLANLTNL---QVLDLSGNQNLTTLGLANLPNLKTL 105
+Y + + +GLA+LT L Q LDLS +NLT GLA+L LK L
Sbjct: 251 LSYCENLTDDGLAHLTPLTALQHLDLSYCENLTDDGLAHLAPLKAL 296
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 66/153 (43%), Gaps = 30/153 (19%)
Query: 1 LANLRYLQVLDLSANYNITS---------GSLTRLGLANLTNL--------------KKL 37
L L LQ LDLS N+T +L RL L N NL + L
Sbjct: 265 LTPLTALQHLDLSYCENLTDDGLAHLAPLKALQRLALTNCKNLTDAGLTHLTTLTALQHL 324
Query: 38 DLDGCGITTIQGLAKLKNLEAL---DLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTT 93
DL T GLA LK L AL DLS YYL + L LT LQ LDLS +NLT
Sbjct: 325 DLSQYWKLTDAGLAHLKPLTALQHLDLSLCYYLTDAGIAHLKPLTALQHLDLSQYRNLTD 384
Query: 94 LGLANLPN---LKTLDLRDCGITTIQGIQQFTS 123
GLA+L L+ L+L C T G+
Sbjct: 385 AGLAHLTPLMGLQYLNLSACKNLTDAGLAHLAP 417
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 62/128 (48%), Gaps = 5/128 (3%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
LA L LQ L+LS+ YN+T L L L L +L D + T + LA L L+ L
Sbjct: 415 LAPLTALQHLNLSSCYNLTDAGLVHLIPLTALQHLYLSDWENLTDTGLAHLAPLTALQHL 474
Query: 60 DLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTI 115
+LS+ L L L +L L LDLS +N T GL +L L+ L L C T
Sbjct: 475 NLSNCRKLTDDGLAHLKSLVTLTHLDLSWCKNFTDEGLTHLTPLTGLQYLVLSLCYHLTD 534
Query: 116 QGIQQFTS 123
G+ +F +
Sbjct: 535 DGLARFKT 542
>gi|386008058|ref|YP_005926336.1| leucine-rich repeat domain protein (LPXTG motif) [Listeria
monocytogenes L99]
gi|307570868|emb|CAR84047.1| leucine-rich repeat domain protein (LPXTG motif) [Listeria
monocytogenes L99]
Length = 597
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQ--GLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
+ NL+ +K L + G IT+ Q L+ L +LE L ++ + L + N+ NL L++
Sbjct: 111 IKNLSTVKNLSIKGGNITSNQFADLSGLSSLENLTVTETKVDNAFLSKINNIPNLTTLNI 170
Query: 86 SGNQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQQFTS 123
S N +T + L +LP L TLD C I GI+QF S
Sbjct: 171 SYNPGITKVDALKSLPKLATLDATFCQIDDFGGIEQFPS 209
>gi|449481628|ref|XP_002192401.2| PREDICTED: leucine-rich repeat and IQ domain-containing protein 1
[Taeniopygia guttata]
Length = 1687
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 17 NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
N+ ++ + ANL NL L L+ ++++ GL KN++ L+LS N + GL +
Sbjct: 660 NVEENNIQVIDCANLENLCILILNKNHLSSVCGLDGCKNIQNLELSYNRITR--IGGLES 717
Query: 77 LTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
L NLQ L + N ++T GL P L LD + ++GI+
Sbjct: 718 LKNLQQLIMDHNHLISTKGLCEAPTLIHLDCSFNHLAQVEGIE 760
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L+ +NL+ L L CG+ ++GL+ K+L+ +++ N + + ANL NL +L L+
Sbjct: 628 LSECSNLQVLTLRRCGLVALEGLSSCKDLKYINVEEN---NIQVIDCANLENLCILILNK 684
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
N + GL N++ L+L IT I G++
Sbjct: 685 NHLSSVCGLDGCKNIQNLELSYNRITRIGGLESL 718
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L + +Q L+LS N +TR+G L +L NL++L +D + + +GL + L L
Sbjct: 693 LDGCKNIQNLELSYN------RITRIGGLESLKNLQQLIMDHNHLISTKGLCEAPTLIHL 746
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQ 116
D S N+ +EG+ N LQVL L GN L N L+ L L D I++++
Sbjct: 747 DCSFNHL--AQVEGIENCGLLQVLKLQGNNLQELPRLENHVLLRELYLDDNSISSVR 801
>gi|195399598|ref|XP_002058406.1| GJ14396 [Drosophila virilis]
gi|194141966|gb|EDW58374.1| GJ14396 [Drosophila virilis]
Length = 1388
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEA 58
+L LQ L+LS N+ S SLT LT L+ +DL C I + G LA L++L+
Sbjct: 511 FEDLENLQALNLSGNH--LSPSLTPALFRPLTRLQVIDLSQCQIRQLSGDLLAGLQDLKH 568
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQ 116
+ L+ N NL N+ +DLS NQ ++ N+ LK LDLR ++ +
Sbjct: 569 IHLAGNQLQELQDGSFVNLWNISSIDLSNNQINSIRAGAFVNVMQLKRLDLRGNRLSAFK 628
Query: 117 G 117
G
Sbjct: 629 G 629
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSN 64
L+++DL YNI S+ L L+++ L G +T + +L L+ LDLS N
Sbjct: 227 LEIIDL--RYNILR-SIDSQAFHGLRKLREIKLAGNRLTNLNSDVFEQLHTLQKLDLSEN 283
Query: 65 YYLHGSLEGLANLTNLQVLDLSGN--QNLTTLGLANLPNLKTLDLRDCGITTI 115
++ LA + L+ L++S N Q L + + +L++LDL IT+I
Sbjct: 284 FFSQFPTVSLAAIAGLKALNVSANMLQQLDYTHMQVVRSLESLDLSRNSITSI 336
>gi|255553273|ref|XP_002517679.1| serine/threonine-protein kinase bri1, putative [Ricinus communis]
gi|223543311|gb|EEF44843.1| serine/threonine-protein kinase bri1, putative [Ricinus communis]
Length = 891
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI--TTIQGLAKLKNLEA 58
LA LR L +LDLS +N +GS+ GL+ L+ L L G + +Q L + +L+
Sbjct: 5 LAALRNLTLLDLS--FNNFNGSIKSEGLSKFKKLETLKLAGNRFMNSVLQSLGAVTSLKT 62
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSG---NQNLTTLGLANLPNLKTLDLRD 109
LDLS N + L NL NL+ LDLS N +L GLA L L+ LDL +
Sbjct: 63 LDLSLNLMQGAFPDELTNLKNLENLDLSTNLLNSSLPIEGLATLKCLEILDLSN 116
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT---IQGLAKLKNLEALDLSS 63
L+ LDLS N+ G+ L NL NL+ LDL + + I+GLA LK LE LDLS+
Sbjct: 60 LKTLDLS--LNLMQGAFPD-ELTNLKNLENLDLSTNLLNSSLPIEGLATLKCLEILDLSN 116
Query: 64 NYYLHGSLEGLANLTNLQVLDLSGNQ---NLTTLGLANLPNLKTLDL 107
N + + ++ +L+ L L+ N+ +L G L NL+ LDL
Sbjct: 117 NRLIGHISPSIGSMASLKALSLANNKLNGSLPPKGFCELTNLQELDL 163
>gi|148907432|gb|ABR16849.1| unknown [Picea sitchensis]
Length = 155
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 11/125 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEAL 59
L LR L V +LS + GL +LT+L+KL+ GCG + +I+GLA+L LE L
Sbjct: 39 LTELRELNVANLSELKELP-------GLEHLTSLRKLNASGCGKLQSIEGLAQLTGLEVL 91
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCG-ITTIQG 117
++++ L L GL +L L+ L+ SG L ++ GL L L+ L++ + + + G
Sbjct: 92 NVANCCELK-ELPGLEHLKRLRELNASGCGKLQSIEGLVQLTGLRELNVANLSELKELPG 150
Query: 118 IQQFT 122
++ T
Sbjct: 151 LEHLT 155
>gi|28210241|ref|NP_781185.1| internalin A-like protein/ S-layer protein [Clostridium tetani E88]
gi|28202677|gb|AAO35122.1| internalin A-like protein/putative S-layer protein [Clostridium
tetani E88]
Length = 695
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY 66
LQ LDLS N GSL+ L LK+L L IT ++ L LKNLE L+L N
Sbjct: 105 LQSLDLSNNEIKDLGSLSGLKY-----LKELTLYKNKITDVKALDGLKNLEKLNLRDNKV 159
Query: 67 LHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
++EGL L L+ LDL N L +L NL+ L+L GI + +++
Sbjct: 160 --KNIEGLKGLEKLRELDLGKNSVFQPKPLKDLKNLRILNLESNGIGNAEDLEEL 212
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
++NL L+ +D N +T + L L LTNLK L ++ ++ + + L NLE L
Sbjct: 371 ISNLEPLKSMDNLENLYLTKTKVVSLEPLRGLTNLKALVINETNVSDLTPIKNLINLERL 430
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L N + SL G+ NL NL+ LD++ N + +L NLK+L++ + +T + +
Sbjct: 431 TLGDNKLV--SLAGIENLVNLESLDINKNNVSNLASIRDLTNLKSLNINENNVTDLSVV 487
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 17 NITSGSLTRLGLA-NLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
NI ++T L + NL NL+++ L+ G+T++ LA L LE + N S GL
Sbjct: 475 NINENNVTDLSVVTNLKNLERISLNKNGVTSLGALAALPELEWVTAKENGL--TSTVGLQ 532
Query: 76 NLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N L+ L L NQ LANL +L+TL LR I+ + + T
Sbjct: 533 NALKLKELFLDSNQISDLSSLANLTSLETLSLRTNNISDVSSLSDLT 579
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 36 KLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH-GSLEGLANLTNLQVLDLSGNQNLTTL 94
KL+L I I GL +NL++LDLS+N GSL GL L+ L L N+
Sbjct: 85 KLNLKSKNIKDISGLEFFENLQSLDLSNNEIKDLGSLSGLK---YLKELTLYKNKITDVK 141
Query: 95 GLANLPNLKTLDLRDCGITTIQGIQ 119
L L NL+ L+LRD + I+G++
Sbjct: 142 ALDGLKNLEKLNLRDNKVKNIEGLK 166
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 60/127 (47%), Gaps = 23/127 (18%)
Query: 20 SGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL--------DLSS-------- 63
+G + +GL N LK+L LD I+ + LA L +LE L D+SS
Sbjct: 523 NGLTSTVGLQNALKLKELFLDSNQISDLSSLANLTSLETLSLRTNNISDVSSLSDLTRMK 582
Query: 64 NYYLH----GSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRD---CGITTIQ 116
N YLH GS+ LA++ NL L + N +AN+ NLKTL + + I +
Sbjct: 583 NLYLHKNNIGSIAPLASMENLTRLYVGKNNISDISAVANMKNLKTLSIGENMVSNIGPVS 642
Query: 117 GIQQFTS 123
G+Q +
Sbjct: 643 GLQSLET 649
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L L+ LDL N L +L NL+ L+L+ GI + L +LK +E L
Sbjct: 165 LKGLEKLRELDLGKN-----SVFQPKPLKDLKNLRILNLESNGIGNAEDLEELKQVEHLI 219
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
LS+N +E L LTN+ L L N +T +G L ++ NLK L++ + I + ++
Sbjct: 220 LSNNTV--DDVEPLLTLTNVNKLYLDDNP-VTHIGKLKDMTNLKRLNINNDSIEDLAELK 276
Query: 120 QF 121
+F
Sbjct: 277 KF 278
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ L L N NI+ S L++LT +K L L I +I LA ++NL L
Sbjct: 553 LANLTSLETLSLRTN-NISDVS----SLSDLTRMKNLYLHKNNIGSIAPLASMENLTRLY 607
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGIT 113
+ N + +AN+ NL+ L + N ++ +G ++ L +L+TLD+ D IT
Sbjct: 608 VGKNNI--SDISAVANMKNLKTLSIGENM-VSNIGPVSGLQSLETLDVADNFIT 658
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L ++ NL+ L L + +++ L L NL+AL ++ L + NL NL+ L L
Sbjct: 377 LKSMDNLENLYLTKTKVVSLEPLRGLTNLKALVINETNV--SDLTPIKNLINLERLTLGD 434
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ ++ G+ NL NL++LD+ ++ + I+ T+
Sbjct: 435 NKLVSLAGIENLVNLESLDINKNNVSNLASIRDLTN 470
>gi|419760963|ref|ZP_14287224.1| hypothetical protein H17ap60334_09449 [Thermosipho africanus
H17ap60334]
gi|407513868|gb|EKF48741.1| hypothetical protein H17ap60334_09449 [Thermosipho africanus
H17ap60334]
Length = 328
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 7/112 (6%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY 66
L+VL LS N NI + S ++NL NL KLDL G I + +++L NL+ L+LS+N
Sbjct: 183 LEVLILSDN-NIKNIS----PISNLINLHKLDLSGNEIIDLTPISELVNLQWLNLSNNRI 237
Query: 67 LHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L + NL NLQ L L N + L+ + +LK LDL I +++ +
Sbjct: 238 Y--DLSPITNLNNLQWLKLYNNNIKSVTPLSGMNSLKYLDLEFNAIISVKPL 287
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 26 LGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
GL NL+ L L I I ++ L NL LDLS N + L ++ L NLQ L+L
Sbjct: 175 FGLEYAVNLEVLILSDNNIKNISPISNLINLHKLDLSGNEII--DLTPISELVNLQWLNL 232
Query: 86 SGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
S N+ + NL NL+ L L + I ++
Sbjct: 233 SNNRIYDLSPITNLNNLQWLKLYNNNIKSV 262
>gi|254828722|ref|ZP_05233409.1| internalin C2 [Listeria monocytogenes FSL N3-165]
gi|258601127|gb|EEW14452.1| internalin C2 [Listeria monocytogenes FSL N3-165]
Length = 548
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL +L+L N + L L
Sbjct: 59 TATGKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGIQYLNNLISLELKDNQITN--LTPL 116
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 117 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 157
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 138 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITDISPLAGLTNLQYL 191
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA LPNL + L+D IT I
Sbjct: 192 SIGNTQV--SDLTPLANLSKLTNLRADDNKISDISPLAGLPNLIEVHLKDNQITDI 245
>gi|417764090|ref|ZP_12412063.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400353922|gb|EJP06075.1| leucine rich repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
Length = 356
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 7/103 (6%)
Query: 18 ITSGSLTRLG--LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGL 74
+ S LT L + L NL+ L+L +TT+ + + +L+NL++LDL SN E +
Sbjct: 216 LVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKE-I 274
Query: 75 ANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGITTI 115
L NLQVLDL NQ LTTL G+ L NL+TLDL +TT+
Sbjct: 275 GQLKNLQVLDLGSNQ-LTTLPEGIGQLKNLQTLDLDSNQLTTL 316
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ LQ L+L N T + L NLK LDL +T + + +LKNL+ L
Sbjct: 228 IGQLKNLQTLNLRNNRLTTLSK----EIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVL 283
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITT 114
DL SN L EG+ L NLQ LDL NQ LTTL + L NL+ L L + +++
Sbjct: 284 DLGSNQ-LTTLPEGIGQLKNLQTLDLDSNQ-LTTLPQEIGQLQNLQELFLNNNQLSS 338
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 9/118 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ L+ L+LS N T + L L+ L LD +TT+ Q + +L+NL++L
Sbjct: 136 IGQLKNLKSLNLSYNQIKTIPK----EIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 191
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
DLS+N L + + +L NLQ L L NQ LT L + L NL+TL+LR+ +TT+
Sbjct: 192 DLSTN-RLTTLPQEIGHLQNLQDLYLVSNQ-LTILPNEIGQLKNLQTLNLRNNRLTTL 247
>gi|224142721|ref|XP_002324703.1| predicted protein [Populus trichocarpa]
gi|222866137|gb|EEF03268.1| predicted protein [Populus trichocarpa]
Length = 926
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 62/115 (53%), Gaps = 11/115 (9%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG----ITTIQGLAKLKNLEA 58
+L+ L+ LDLS IT + + +T+LK L+L GC I T QG LKNLE
Sbjct: 245 DLKNLEYLDLSY---ITLNNSIFQAIRTMTSLKTLNLMGCSLNGQIPTTQGFLNLKNLEY 301
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGN----QNLTTLGLANLPNLKTLDLRD 109
LDLS N + L+ + +T+L+ L LS Q TT GL +L +L+ L + D
Sbjct: 302 LDLSDNTLDNNILQTIGTMTSLKTLSLSSCKLNIQIPTTQGLCDLNHLQVLYMYD 356
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 60/112 (53%), Gaps = 12/112 (10%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG----ITTIQGLAKLKNLEA 58
NL+ L+ LDLS N + + L +G +T+LK L L C I T QGL L +L+
Sbjct: 295 NLKNLEYLDLSDN-TLDNNILQTIG--TMTSLKTLSLSSCKLNIQIPTTQGLCDLNHLQV 351
Query: 59 LDLSSNYYLHGSLEG-LANLTNLQVLDLSGNQ---NLTTLGLANLPNLKTLD 106
L + N L G L LANLT+LQ LDLS N ++ L NL LK+ D
Sbjct: 352 LYMYDND-LSGFLPPCLANLTSLQRLDLSYNHFKIPMSLRPLYNLSKLKSFD 402
>gi|327354410|gb|EGE83267.1| hypothetical protein BDDG_06211 [Ajellomyces dermatitidis ATCC
18188]
Length = 365
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
LTNLK + L +TTI GL+ L+NLE L +S N ++ GL N TNL+VLD+S NQ
Sbjct: 230 LTNLKIISLPSNRLTTISGLSNLQNLEELYVSHNAI--TAISGLENNTNLRVLDISSNQ 286
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L +LT L++L L IT I+ + L NL+ + L SN ++ GL+NL NL+ L +S
Sbjct: 205 LDDLTALEELWLGKNKITEIKNIDALTNLKIISLPSNRL--TTISGLSNLQNLEELYVSH 262
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N GL N NL+ LD+ I+ ++ I T
Sbjct: 263 NAITAISGLENNTNLRVLDISSNQISKLENISHLT 297
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 18 ITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
+ S LT + GL+NL NL++L + IT I GL NL LD+SSN LE +++
Sbjct: 238 LPSNRLTTISGLSNLQNLEELYVSHNAITAISGLENNTNLRVLDISSNQI--SKLENISH 295
Query: 77 LTNLQVLDLSGNQ 89
LT+L+ L S NQ
Sbjct: 296 LTHLEELWASNNQ 308
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L L+ L+L I I+ L L LE L L N ++ + LTNL+++ L
Sbjct: 182 GLDGLKVLRNLELAANRIREIENLDDLTALEELWLGKNKI--TEIKNIDALTNLKIISLP 239
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ T GL+NL NL+ L + IT I G++ T
Sbjct: 240 SNRLTTISGLSNLQNLEELYVSHNAITAISGLENNT 275
>gi|186686533|ref|YP_001869729.1| hypothetical protein Npun_R6524 [Nostoc punctiforme PCC 73102]
gi|186468985|gb|ACC84786.1| leucine-rich repeat protein [Nostoc punctiforme PCC 73102]
Length = 1124
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 66/112 (58%), Gaps = 13/112 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITTI-QGLAKLKNLE 57
+A+L LQ LDLS N LT+L +A+L L++LDL +T + + +A L L+
Sbjct: 62 IASLTQLQTLDLSNN------KLTQLPEAIASLARLQRLDLSNNQLTELPEAIASLAQLQ 115
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDL 107
L+L +N L E +A+LT LQ LDLS NQ LT L +A+L L++ DL
Sbjct: 116 ELNLRNNQ-LTELPEAIASLTRLQRLDLSNNQ-LTELPEAIASLTQLQSFDL 165
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
+A+LT L++LDL +T + + +A L L+ LDLS+N L E +A+L LQ LDL
Sbjct: 38 AIASLTQLQQLDLSRNQVTQLPEAIASLTQLQTLDLSNN-KLTQLPEAIASLARLQRLDL 96
Query: 86 SGNQNLTTL--GLANLPNLKTLDLRDCGITTI 115
S NQ LT L +A+L L+ L+LR+ +T +
Sbjct: 97 SNNQ-LTELPEAIASLAQLQELNLRNNQLTEL 127
>gi|85679270|gb|ABC72051.1| InlC2 [Listeria monocytogenes]
Length = 547
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL +L+L N + L L
Sbjct: 58 TATGKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGIQYLNNLISLELKDNQITN--LTPL 115
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 116 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 156
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 137 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITDISPLAGLTNLQYL 190
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA+LPNL + L+D I+ +
Sbjct: 191 SIGNTQV--SDLTPLANLSKLTNLRADDNKISDISPLASLPNLIEVHLKDNQISDV 244
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 115 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 167
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L L N + LA LTNLQ L + Q LANL L L D I+ I
Sbjct: 168 LYLDLNQITD--ISPLAGLTNLQYLSIGNTQVSDLTPLANLSKLTNLRADDNKISDI 222
>gi|418688840|ref|ZP_13249975.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
gi|400361998|gb|EJP17951.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
Length = 492
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 7/103 (6%)
Query: 18 ITSGSLTRLG--LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGL 74
+ S LT L + L NL+ L+L +TT+ + + +L+NL++LDL SN E +
Sbjct: 352 LVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKE-I 410
Query: 75 ANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGITTI 115
L NLQVLDL NQ LTTL G+ L NL+TLDL +TT+
Sbjct: 411 GQLKNLQVLDLGSNQ-LTTLPEGIGQLKNLQTLDLDSNQLTTL 452
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 17 NITSGSLTRLG--LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEG 73
N+ + LT L + L NLK LDL +T + + +LKNL+ LDL SN L EG
Sbjct: 374 NLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQ-LTTLPEG 432
Query: 74 LANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITT 114
+ L NLQ LDL NQ LTTL + L NL+ L L + +++
Sbjct: 433 IGQLKNLQTLDLDSNQ-LTTLPQEIGQLQNLQELFLNNNQLSS 474
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 66/118 (55%), Gaps = 9/118 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ L+ L+LS N T + L L+ L L +TT+ Q + +L+NL++L
Sbjct: 272 IGQLKNLKSLNLSYNQIKTIPK----EIEKLQKLQSLYLPNNQLTTLPQEIGQLQNLQSL 327
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
DLS+N L + + +L NLQ L L NQ LT L + L NL+TL+LR+ +TT+
Sbjct: 328 DLSTN-RLTTLPQEIGHLQNLQDLYLVSNQ-LTILPNEIGQLKNLQTLNLRNNRLTTL 383
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ L+ LDL +N ++ + L NL+ LDL +TT+ +G+ +LKNL+ L
Sbjct: 387 IEQLQNLKSLDLRSN----QLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTL 442
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
DL SN L + + L NLQ L L+ NQ
Sbjct: 443 DLDSN-QLTTLPQEIGQLQNLQELFLNNNQ 471
>gi|432947187|ref|XP_004083935.1| PREDICTED: toll-like receptor 5-like [Oryzias latipes]
Length = 629
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANL-TNLKKLDLDG--CGITTIQGLAKLKNLEALD 60
LR ++ +DLS N + R L TNLK L+L G A L+ L+ LD
Sbjct: 302 LREVRAIDLSHN---RLNQIRRNAFQGLQTNLKVLNLSHNLLGEVYRHTFASLEVLQVLD 358
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQ 119
LS N+ + L NL+VLDL GN +L LG A+LP+L L L D IT++ G+
Sbjct: 359 LSHNHIGAVGYRSFSGLPNLKVLDLQGN-SLRDLGSPASLPHLDYLILDDNKITSVNGLT 417
Query: 120 QFT 122
+F
Sbjct: 418 RFA 420
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 63/139 (45%), Gaps = 24/139 (17%)
Query: 1 LANLRYLQVLDLSAN------YNITSG------------SLTRLG-LANLTNLKKLDLDG 41
A+L LQVLDLS N Y SG SL LG A+L +L L LD
Sbjct: 348 FASLEVLQVLDLSHNHIGAVGYRSFSGLPNLKVLDLQGNSLRDLGSPASLPHLDYLILDD 407
Query: 42 CGITTIQGLAKL-KNLEALDLSSNYYLH-GSLEGLAN-LTNLQVLDLSGNQ-NLTTLGLA 97
IT++ GL + +N+ L + N + G + LAN L L L GN TLG
Sbjct: 408 NKITSVNGLTRFARNVSHLSIQDNRIANVGDIYALANQLERLSSLLFGGNAVKWCTLGPQ 467
Query: 98 NLPN-LKTLDLRDCGITTI 115
PN +K LDL D + +
Sbjct: 468 AAPNTVKHLDLHDSSLQFV 486
>gi|83629817|gb|ABC26570.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL +L+L N + L L
Sbjct: 58 TATGKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGIQYLNNLISLELKDNQITN--LTPL 115
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 116 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 156
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 115 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 167
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L L N + LA LTNLQ L + Q LANL L L D I+ I
Sbjct: 168 LYLDLNQITD--ISPLAGLTNLQYLSIGNTQVSDLTPLANLSKLTNLRADDNKISDI 222
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 137 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITDISPLAGLTNLQYL 190
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA LPNL + L+D I+ +
Sbjct: 191 SIGNTQV--SDLTPLANLSKLTNLRADDNKISDISPLAGLPNLIEVHLKDNQISDV 244
>gi|358372080|dbj|GAA88685.1| hypothetical protein AKAW_06799 [Aspergillus kawachii IFO 4308]
Length = 376
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G+ LT+L+ L+L I I+ L LK LE L L N L+ L L+NL++L +
Sbjct: 193 GVETLTSLRNLELGANRIREIENLDNLKALEELWLGKNKI--TELKNLDGLSNLRILSIQ 250
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ + GL+NL NL+ L + IT + G+++ TS
Sbjct: 251 SNRLTSISGLSNLKNLEELYVSHNAITDLSGLEENTS 287
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L NL+ L+ L L N +T L L L+NL+ L + +T+I GL+ LKNLE L
Sbjct: 216 LDNLKALEELWLGKN------KITELKNLDGLSNLRILSIQSNRLTSISGLSNLKNLEEL 269
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
+S N L GL T+L+VLD S NQ +++L NL+ L
Sbjct: 270 YVSHNAI--TDLSGLEENTSLRVLDFSNNQVSKLEHVSHLKNLEEL 313
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 12/90 (13%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L+NLR L +I S LT + GL+NL NL++L + IT + GL + +L L
Sbjct: 241 LSNLRIL---------SIQSNRLTSISGLSNLKNLEELYVSHNAITDLSGLEENTSLRVL 291
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
D S+N LE +++L NL+ L S NQ
Sbjct: 292 DFSNNQV--SKLEHVSHLKNLEELWASNNQ 319
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 22 SLTRLGLANLTNLKKLDLDGCGITTIQGLAKL-KNLEALDLSSNYYLHGSLEGLANLTNL 80
SL L L +K+L IT I+ ++ K+L LDL N H ++GL NL
Sbjct: 99 SLPALRLERFPKVKRLCFRQNQITRIEFPTEVAKSLTELDLYDNLISH--VKGLDEFENL 156
Query: 81 QVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
LDLS N+ +++L L L I+ I+G++ TS
Sbjct: 157 TSLDLSFNKIKHVKNISHLVKLTDLYFVQNKISKIEGVETLTS 199
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NL L++L L IT ++ L L NL L + SN S+ GL+NL NL+ L +S
Sbjct: 216 LDNLKALEELWLGKNKITELKNLDGLSNLRILSIQSNRL--TSISGLSNLKNLEELYVSH 273
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
N GL +L+ LD + ++ ++ +
Sbjct: 274 NAITDLSGLEENTSLRVLDFSNNQVSKLEHVSH 306
>gi|217964568|ref|YP_002350246.1| internalin like protein [Listeria monocytogenes HCC23]
gi|386026657|ref|YP_005947433.1| putative peptidoglycan bound protein (LPXTG motif) [Listeria
monocytogenes M7]
gi|217333838|gb|ACK39632.1| internalin like protein [Listeria monocytogenes HCC23]
gi|336023238|gb|AEH92375.1| putative peptidoglycan bound protein (LPXTG motif) [Listeria
monocytogenes M7]
Length = 580
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQ--GLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
+ NL+ +K L + G IT+ Q L+ L +LE L ++ + L + N+ NL L++
Sbjct: 94 IKNLSTVKNLSIKGGNITSNQFADLSGLSSLENLTVTETKVDNAFLSKINNIPNLTTLNI 153
Query: 86 SGNQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQQFTS 123
S N +T + L +LP L TLD C I GI+QF S
Sbjct: 154 SYNPGITKVDALKSLPKLATLDATFCQIDDFGGIEQFPS 192
>gi|335773403|gb|AEH58382.1| phosphatase 1 regulatory subunit-like protein [Equus caballus]
Length = 275
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
++NLR LQ+L+L +N I + + LTNL+ L L IT +Q L L NL L
Sbjct: 155 ISNLRQLQMLELGSNR-IRAIE----NIDTLTNLESLFLGKNKITKLQNLDALTNLTVLS 209
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ SN +EGL NL NL+ L LS N GL N L LD+ I I+ I
Sbjct: 210 MQSNRL--TKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDVASNRIKKIENISH 267
Query: 121 FTS 123
T
Sbjct: 268 LTE 270
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 1 LANLRYLQVLDLSAN--YNITS-GSLTRL--------------GLANLTNLKKLDLDGCG 43
L L L++LD+S N NI LTRL ++NL L+ L+L
Sbjct: 111 LEALTELEILDISFNLLRNIEGIDKLTRLKKLFLVNNKINKIENISNLRQLQMLELGSNR 170
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
I I+ + L NLE+L L N L+ L LTNL VL + N+ GL NL NL+
Sbjct: 171 IRAIENIDTLTNLESLFLGKNKI--TKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLR 228
Query: 104 TLDLRDCGITTIQGIQ 119
L L GI I+G++
Sbjct: 229 ELYLSHNGIEVIEGLE 244
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 7 LQVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
LQ LD N + S RL GL NL NL++L L GI I+GL L LD++
Sbjct: 196 LQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDVA 255
Query: 63 SNYYLHGSLEGLANLTNLQ 81
SN +E +++LT LQ
Sbjct: 256 SNRI--KKIENISHLTELQ 272
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LT L+ LD+ + I+G+ KL L+ L L +N +E ++NL LQ+L+L
Sbjct: 111 LEALTELEILDISFNLLRNIEGIDKLTRLKKLFLVNNKI--NKIENISNLRQLQMLELGS 168
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ + L NL++L L IT +Q + T+
Sbjct: 169 NRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTN 204
>gi|302143590|emb|CBI22343.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 26 LGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
L L LTNL+ L LDGC + I +AKLK LE L L + E +A LT+L++LDL
Sbjct: 569 LSLQCLTNLRTLCLDGCKVGDIVIIAKLKKLEILSLMDSDMEQLPRE-IAQLTHLRMLDL 627
Query: 86 SGNQNLTTL------GLANLPNL 102
SG+ L + L+ L NL
Sbjct: 628 SGSSKLKVIPSDVISSLSQLENL 650
>gi|115469172|ref|NP_001058185.1| Os06g0644300 [Oryza sativa Japonica Group]
gi|113596225|dbj|BAF20099.1| Os06g0644300 [Oryza sativa Japonica Group]
Length = 2225
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
Query: 5 RYLQVLDLSA-NYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSS 63
++L++LD SA N S++ L L LK L++ G T + L+KL +L+AL LS+
Sbjct: 499 KFLRILDFSACTINELPDSISHLSL-----LKYLNVSGLSGTLPKSLSKLHHLQALTLST 553
Query: 64 NYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGITTIQGIQQF 121
N L + LQ LDL G L L G+ L+ L+L DC T+++ + F
Sbjct: 554 NIDLVELPSYICEFLKLQYLDLHGCSKLKKLPDGIHKHKELQHLNLSDC--TSLESLPLF 611
Query: 122 TS 123
+S
Sbjct: 612 SS 613
>gi|423507131|ref|ZP_17483714.1| hypothetical protein IG1_04688, partial [Bacillus cereus HD73]
gi|402444993|gb|EJV76870.1| hypothetical protein IG1_04688, partial [Bacillus cereus HD73]
Length = 800
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L N++++ L + +IT G L +G LA L +++ L L I+ + L+++K ++ L
Sbjct: 257 LKNIKFISGLRQLKSLSITYGELEDIGPLAELEHIEFLTLRNNKISDLSPLSQMKKIKML 316
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQG 117
DL+SNY ++ L + +L+ L ++ NQ N G+ L N+K L L + G+T I+
Sbjct: 317 DLNSNYI--KDIKPLFTVKSLRTLTVANNQISNDNLAGIEQLKNVKNLSLSNNGLTNIEH 374
Query: 118 I 118
I
Sbjct: 375 I 375
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 21/139 (15%)
Query: 1 LANLRYLQVLDLSANYN------ITSGSLTRLGLAN-------------LTNLKKLDLDG 41
L+ ++ +++LDL++NY T SL L +AN L N+K L L
Sbjct: 307 LSQMKKIKMLDLNSNYIKDIKPLFTVKSLRTLTVANNQISNDNLAGIEQLKNVKNLSLSN 366
Query: 42 CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
G+T I+ + +K L LDL+ N ++E L+ L+ +Q L+L N L++L +
Sbjct: 367 NGLTNIEHITSMKKLVELDLAKNEL--ENIEPLSRLSTVQSLNLEENYISDITPLSHLTD 424
Query: 102 LKTLDLRDCGITTIQGIQQ 120
L L L I ++ +Q+
Sbjct: 425 LYDLKLGSNEIRDVRPVQE 443
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+KL L+G G+ I+ ++ LK L +++S N + L++L NLQ L+L+
Sbjct: 601 GLEYMTNLEKLTLEGVGLKNIEFISNLKQLNNVNVSHNQI--EDITPLSSLENLQWLNLA 658
Query: 87 GN--QNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
N +++T +G ++ NL +L+L I ++ + Q +
Sbjct: 659 DNHIKDVTVIG--SMLNLFSLNLAGNEIRDVRSLIQLGQW 696
>gi|423422719|ref|ZP_17399750.1| hypothetical protein IE5_00408, partial [Bacillus cereus BAG3X2-2]
gi|401118704|gb|EJQ26533.1| hypothetical protein IE5_00408, partial [Bacillus cereus BAG3X2-2]
Length = 815
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L N++++ L + +IT G L +G LA L +++ L L I+ + L+++K ++ L
Sbjct: 257 LKNIKFISGLRQLKSLSITYGELEDIGPLAELEHIEFLTLRNNKISDLSPLSQMKKIKML 316
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQG 117
DL+SNY ++ L + +L+ L ++ NQ N G+ L N+K L L + G+T I+
Sbjct: 317 DLNSNYI--KDIKPLFTVKSLRTLTVANNQISNDNLAGIEQLKNVKNLSLSNNGLTNIEH 374
Query: 118 I 118
I
Sbjct: 375 I 375
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 21/139 (15%)
Query: 1 LANLRYLQVLDLSANYN------ITSGSLTRLGLAN-------------LTNLKKLDLDG 41
L+ ++ +++LDL++NY T SL L +AN L N+K L L
Sbjct: 307 LSQMKKIKMLDLNSNYIKDIKPLFTVKSLRTLTVANNQISNDNLAGIEQLKNVKNLSLSN 366
Query: 42 CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
G+T I+ + +K L LDL+ N ++E L+ L+ +Q L+L N L++L +
Sbjct: 367 NGLTNIEHITSMKKLVELDLAKNEL--ENIEPLSRLSTVQSLNLEENYISDITPLSHLTD 424
Query: 102 LKTLDLRDCGITTIQGIQQ 120
L L L I ++ +Q+
Sbjct: 425 LYDLKLGSNEIRDVRPVQE 443
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+KL L+G G+ I+ ++ LK L +++S N + L++L NLQ L+L+
Sbjct: 601 GLEYMTNLEKLTLEGVGLKNIEFISNLKQLNNVNVSHNQI--EDITPLSSLENLQWLNLA 658
Query: 87 GN--QNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
N +++T +G ++ NL +L+L I ++ + Q +
Sbjct: 659 DNHIKDVTVIG--SMLNLFSLNLAGNEIRDVRSLIQLGQW 696
>gi|343413825|emb|CCD21196.1| leucine-rich repeat protein, putative [Trypanosoma vivax Y486]
Length = 510
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 31/149 (20%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC------------------ 42
L+NL L++L+LS IT S L+ ++L+ LDL C
Sbjct: 361 LSNLSSLRMLNLSHCTGITDVS----PLSVFSSLRTLDLSHCTGITNVSPLSNLSSLRSL 416
Query: 43 ------GITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG- 95
GIT + L++L +LE L+LS + + L+ L++L LDLS +T +
Sbjct: 417 DLSHCTGITDVSPLSELSSLEKLNLSHCTAI-TDVSPLSELSSLHTLDLSHCTGITDVSP 475
Query: 96 LANLPNLKTLDLRDC-GITTIQGIQQFTS 123
L+ L +L+TLDL C GIT + + + +S
Sbjct: 476 LSKLSSLRTLDLLHCTGITDVSPLSELSS 504
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
Query: 9 VLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEALDLSSNYYL 67
+LDLS IT S L+ L++L+ L L C GIT + L+KL +L LDLS +
Sbjct: 1 MLDLSHCTGITDVS----PLSKLSSLRTLGLSHCTGITDVSPLSKLSSLRTLDLSHCTGI 56
Query: 68 HGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDC-GITTIQGIQQFTS 123
+ L+ L++L L LS +T + L+ L +L+TL L C GIT + + F+S
Sbjct: 57 -TDVSPLSKLSSLHTLGLSHCTGITDVPPLSVLSSLRTLGLSHCTGITDVSPLSVFSS 113
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 8/126 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ L LS IT S L+ ++L+ L L C GIT + L+KL +L L
Sbjct: 85 LSVLSSLRTLGLSHCTGITDVS----PLSVFSSLRMLYLSHCTGITDVSPLSKLSSLRTL 140
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L++L L LS +T + L+ L +L TLDL C GIT +
Sbjct: 141 DLSHCTGI-TDVSPLSKLSSLHTLGLSHCTGITDVSPLSKLSSLHTLDLSHCTGITDVPP 199
Query: 118 IQQFTS 123
+ +S
Sbjct: 200 LSVLSS 205
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L LDLS IT L+ L++L+ L L C GIT + L+ L +L L
Sbjct: 177 LSKLSSLHTLDLSHCTGITDVP----PLSVLSSLRTLGLSHCTGITDVSPLSVLSSLRML 232
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDC-GITTIQG 117
DLS + + L+ L++L+ L LS +T + L+ L +L L L C GIT +
Sbjct: 233 DLSHCTGI-TDVSPLSKLSSLRTLGLSHCTGITDVSPLSKLSSLHILGLSHCTGITDVSP 291
Query: 118 IQQFTSY 124
+ +
Sbjct: 292 LTTIIGF 298
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 31/141 (21%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC------------------ 42
L+ L L +L LS IT S L + +KL L C
Sbjct: 269 LSKLSSLHILGLSHCTGITDVS----PLTTIIGFEKLYLSNCTGITDVSPLSKLSSLRSL 324
Query: 43 ------GITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG- 95
GIT + L++L +L LDLS + ++ L+NL++L++L+LS +T +
Sbjct: 325 DLSHCTGITDVSPLSELSSLRTLDLSHCRGI-ANVSPLSNLSSLRMLNLSHCTGITDVSP 383
Query: 96 LANLPNLKTLDLRDC-GITTI 115
L+ +L+TLDL C GIT +
Sbjct: 384 LSVFSSLRTLDLSHCTGITNV 404
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 14/90 (15%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC-GITTIQGLAKLKNLEAL 59
L+ L L+ L+LS IT S L+ L++L LDL C GIT + L+KL +L L
Sbjct: 430 LSELSSLEKLNLSHCTAITDVS----PLSELSSLHTLDLSHCTGITDVSPLSKLSSLRTL 485
Query: 60 DLSSNYYLHGS----LEGLANLTNLQVLDL 85
DL LH + + L+ L++L LD
Sbjct: 486 DL-----LHCTGITDVSPLSELSSLGTLDF 510
>gi|224114507|ref|XP_002332347.1| predicted protein [Populus trichocarpa]
gi|222832068|gb|EEE70545.1| predicted protein [Populus trichocarpa]
Length = 337
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 25 RLGLANLTNLK---KLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQ 81
R+ + NL LK KL L +T+++G + LE L LS N +EGL+ L NL
Sbjct: 196 RIKVVNLCGLKCIKKLSLQSNRLTSMKGFEECVALEELYLSHNGI--AKMEGLSTLANLH 253
Query: 82 VLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
VLD+S N+ + + NL L+ L L D I +++G+ +
Sbjct: 254 VLDVSSNKLTSVDDIQNLTQLEDLWLNDNQIESLKGVAE 292
>gi|222635972|gb|EEE66104.1| hypothetical protein OsJ_22137 [Oryza sativa Japonica Group]
Length = 2337
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
Query: 5 RYLQVLDLSA-NYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSS 63
++L++LD SA N S++ L L LK L++ G T + L+KL +L+AL LS+
Sbjct: 564 KFLRILDFSACTINELPDSISHLSL-----LKYLNVSGLSGTLPKSLSKLHHLQALTLST 618
Query: 64 NYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGITTIQGIQQF 121
N L + LQ LDL G L L G+ L+ L+L DC T+++ + F
Sbjct: 619 NIDLVELPSYICEFLKLQYLDLHGCSKLKKLPDGIHKHKELQHLNLSDC--TSLESLPLF 676
Query: 122 TS 123
+S
Sbjct: 677 SS 678
>gi|83629819|gb|ABC26571.1| internalin C2 [Listeria monocytogenes]
gi|83629821|gb|ABC26572.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL +L+L N + L L
Sbjct: 58 TATGKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGIQYLNNLISLELKDNQITN--LTPL 115
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 116 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 156
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 137 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITDISPLAGLTNLQYL 190
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA LPNL + L+D IT I
Sbjct: 191 SIGNTQV--SDLTPLANLSKLTNLRADDNKISDISPLAGLPNLIEVHLKDNQITDI 244
>gi|195578823|ref|XP_002079263.1| GD22095 [Drosophila simulans]
gi|194191272|gb|EDX04848.1| GD22095 [Drosophila simulans]
Length = 1442
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSNY 65
QVLD+S N + + S + ANL NL+KL L C I I+ L NL LDLS N
Sbjct: 124 QVLDMSGN-KLQTLSNEQFIRANLLNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNL 182
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTI 115
+ L ++ +L+ L L+ N + + N P+L LDL C I TI
Sbjct: 183 LVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNTPSLHKLDLSHCDIQTI 234
>gi|157136286|ref|XP_001656813.1| leucine-rich transmembrane protein [Aedes aegypti]
gi|108881081|gb|EAT45306.1| AAEL003408-PA [Aedes aegypti]
Length = 1587
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 61/122 (50%), Gaps = 12/122 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGIT--TIQGLAKLKNL 56
N R LQVLDLSAN L L L+ L+ L+++D+ +T T L +NL
Sbjct: 693 FRNSRSLQVLDLSAN------KLRELPESLSGLSELREIDVSFNELTDLTPNVLGSWRNL 746
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITT 114
E L S+N L NL LQ +DLS N+ NL L NLP L+ L L D +T
Sbjct: 747 EELKASNNRVNQLHQGSLRNLPMLQYMDLSSNELSNLEHGSLRNLPELQELVLADNKLTE 806
Query: 115 IQ 116
++
Sbjct: 807 LK 808
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEA 58
LA + L+VL+L N + +L L++L NL++L+L G I + L NLE
Sbjct: 621 LAGMNRLEVLNLQDNRLL---ALHERSLSSLENLRELNLQGNRIEVLVDHLLDNNANLER 677
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
D S N + S + N +LQVLDLS N+
Sbjct: 678 FDASRNSIVDISQKAFRNSRSLQVLDLSANK 708
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 69/153 (45%), Gaps = 36/153 (23%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNL 56
L NL LQ +DLS+N N+ GSL NL L++L L +T ++ L NL
Sbjct: 764 LRNLPMLQYMDLSSNELSNLEHGSLR-----NLPELQELVLADNKLTELKDRVFEDLPNL 818
Query: 57 EALDLSSN---------YYLHGSLE---------------GLANLTNLQVLDLSGN--QN 90
+A+ L N +Y S+ GL ++ NL+VLDLS N +
Sbjct: 819 QAVHLQQNNLHYLAPQTFYRSPSIVYLNLSANQFRSLDSVGLRSVRNLEVLDLSSNFIRK 878
Query: 91 LTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
+T L L L L L + I IQG + F+S
Sbjct: 879 ITPNPLRGLDWLVELKLDNNKICGIQG-EPFSS 910
>gi|20152123|gb|AAM11421.1| SD01674p [Drosophila melanogaster]
Length = 810
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSNY 65
QVLD+S N + + S + ANL NL+KL L C I I+ L NL LDLS N
Sbjct: 124 QVLDMSGN-KLQTLSNEQFIRANLLNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNL 182
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTI 115
+ L ++ +L+ L L+ N + + N P+L LDL C I TI
Sbjct: 183 LVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNTPSLHKLDLSHCDIQTI 234
>gi|114568006|ref|YP_755160.1| leucine-rich repeat-containing protein [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|114338941|gb|ABI69789.1| Leucine-rich repeat (LRR) protein-like protein [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
Length = 1351
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G+ + T+L+ L L G GIT + L L+NL+ LD+S+N L L L+NLQ LD S
Sbjct: 724 GIQHFTSLQTLYLAGNGITDLTPLQSLRNLQYLDISNNAIT--DLGPLTKLSNLQGLDFS 781
Query: 87 GNQNLTTLGLANLPNLKTLDL 107
NQ LANL +L+ LD
Sbjct: 782 YNQLTDIQALANLTDLRYLDF 802
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 62/146 (42%), Gaps = 47/146 (32%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L +LR LQ LD+S N ++T LG L L+NL+ LD +T IQ LA L +L L
Sbjct: 747 LQSLRNLQYLDISNN------AITDLGPLTKLSNLQGLDFSYNQLTDIQALANLTDLRYL 800
Query: 60 DLSSNYYLHGSLEGLANL---------------------------------------TNL 80
D S N + G LE L NL NL
Sbjct: 801 DFSYNDGV-GVLEPLRNLIGLTDLFIAGIRDSNPAQVALCSVSSNQSTDIGAILAGLKNL 859
Query: 81 QVLDLSGNQNLTTLGLANLPNLKTLD 106
+ LD+S N+ + LPNLKT+D
Sbjct: 860 ENLDISNNELPDITFVNQLPNLKTID 885
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 19/138 (13%)
Query: 1 LANLRYLQVLDLSANYNITSG---------SLTRLGLANLTNLKKLDLDGCGITTIQG-- 49
LANL L+ LD S YN G LT L +A + + + C +++ Q
Sbjct: 791 LANLTDLRYLDFS--YNDGVGVLEPLRNLIGLTDLFIAGIRDSNPAQVALCSVSSNQSTD 848
Query: 50 ----LAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
LA LKNLE LD+S+N + + L NL+ +D S N + T L L NL+ +
Sbjct: 849 IGAILAGLKNLENLDISNNELPDITF--VNQLPNLKTIDASNNTIVDTTPLETLSNLEKV 906
Query: 106 DLRDCGITTIQGIQQFTS 123
L + IT+I + + S
Sbjct: 907 SLYNNNITSISSLVKIPS 924
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLAN-LTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
LA L+ L+ LD+S N L + N L NLK +D I L L NLE +
Sbjct: 853 LAGLKNLENLDISNN------ELPDITFVNQLPNLKTIDASNNTIVDTTPLETLSNLEKV 906
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL 107
L +N S+ L + +LQ +++SGNQ + L NL LDL
Sbjct: 907 SLYNNNIT--SISSLVKIPSLQEINISGNQVGGISQIEQLANLTKLDL 952
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 30 NLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
++ N+ +L L+ G+ +++G+ +L+ L L+ N L L +L NLQ LD+S N
Sbjct: 705 DIENITELALNFKGLASLEGIQHFTSLQTLYLAGNGIT--DLTPLQSLRNLQYLDISNNA 762
Query: 90 NLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
+T LG L L NL+ LD +T IQ + T
Sbjct: 763 -ITDLGPLTKLSNLQGLDFSYNQLTDIQALANLT 795
>gi|85679264|gb|ABC72048.1| InlC2 [Listeria monocytogenes]
Length = 550
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T +G +N+T+ + + DLDG G+TTI+G+ L NL L+L N L L
Sbjct: 58 TAVGKSNVTDTVTQADLDGIAILSAFNTGVTTIEGIQYLNNLIGLELKDNQITD--LTPL 115
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 116 KNLTKITELELSGNPLKNASAIAGLQSIKTLDLTSTQITDV 156
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA+L+NL+ L LD IT I LA L NL+ L
Sbjct: 137 IAGLQSIKTLDL------TSTQITDVTPLADLSNLQVLYLDLNQITNISPLAGLTNLQYL 190
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ +N L LANL+ L L N+ LA+LPNL + L+D I+ +
Sbjct: 191 SIGNNQV--SDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDNQISDV 244
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL + L+LS N + + S +A L ++K LDL IT + LA L NL+ L
Sbjct: 115 LKNLTKITELELSGN-PLKNAS----AIAGLQSIKTLDLTSTQITDVTPLADLSNLQVLY 169
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L N + + LA LTNLQ L + NQ LANL L TL D I+ I
Sbjct: 170 LDLNQITN--ISPLAGLTNLQYLSIGNNQVSDLTPLANLSKLTTLRADDNKISDI 222
>gi|15230846|ref|NP_189178.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
thaliana]
gi|332643497|gb|AEE77018.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
thaliana]
Length = 1981
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 26 LGLANLTNLKKLDLDGCG-ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLD 84
L + TNLKK L+GC + + + NL+ LDL + L + N NLQ LD
Sbjct: 776 LSIVKFTNLKKFILNGCSSLVELPFMGNATNLQNLDLGNCSSLVELPSSIGNAINLQNLD 835
Query: 85 LSGNQNLTTLG--LANLPNLKTLDLRDC 110
LS +L L + N NL+ LDLR C
Sbjct: 836 LSNCSSLVKLPSFIGNATNLEILDLRKC 863
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG--ITTIQGLAKLKNLEA 58
+ N+ LQVL+L N+ + + TNL +LDL GC + + + NL+
Sbjct: 897 VGNISELQVLNLHNCSNLVKLPSS---FGHATNLWRLDLSGCSSLVELPSSIGNITNLQE 953
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDC 110
L+L + L + NL L L L+ Q L L NL +L+ LDL DC
Sbjct: 954 LNLCNCSNLVKLPSSIGNLHLLFTLSLARCQKLEALPSNINLKSLERLDLTDC 1006
Score = 34.7 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 57/138 (41%), Gaps = 31/138 (22%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG-----------ITTIQ- 48
+ N L++LDL ++ + ++TNL +LDL GC I+ +Q
Sbjct: 849 IGNATNLEILDLRKCSSLVE---IPTSIGHVTNLWRLDLSGCSSLVELPSSVGNISELQV 905
Query: 49 -------GLAKL-------KNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL 94
L KL NL LDLS L + N+TNLQ L+L NL L
Sbjct: 906 LNLHNCSNLVKLPSSFGHATNLWRLDLSGCSSLVELPSSIGNITNLQELNLCNCSNLVKL 965
Query: 95 --GLANLPNLKTLDLRDC 110
+ NL L TL L C
Sbjct: 966 PSSIGNLHLLFTLSLARC 983
>gi|47096523|ref|ZP_00234114.1| internalin C2 [Listeria monocytogenes str. 1/2a F6854]
gi|254913499|ref|ZP_05263511.1| internalin C2 [Listeria monocytogenes J2818]
gi|254937920|ref|ZP_05269617.1| internalin C2 [Listeria monocytogenes F6900]
gi|386045906|ref|YP_005964238.1| internalin C2 [Listeria monocytogenes J0161]
gi|47015114|gb|EAL06056.1| internalin C2 [Listeria monocytogenes str. 1/2a F6854]
gi|258610529|gb|EEW23137.1| internalin C2 [Listeria monocytogenes F6900]
gi|293591507|gb|EFF99841.1| internalin C2 [Listeria monocytogenes J2818]
gi|345532897|gb|AEO02338.1| internalin C2 [Listeria monocytogenes J0161]
Length = 548
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL +L+L N + L L
Sbjct: 59 TATGKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGIQYLNNLISLELKDNQITN--LTPL 116
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 117 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 157
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 138 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITDISPLAGLTNLQYL 191
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA LPNL + L+D IT I
Sbjct: 192 SIGNTQV--SDLTPLANLSKLTNLRADDNKISDISPLAGLPNLIEVHLKDNQITDI 245
>gi|85679299|gb|ABC72065.1| InlE [Listeria monocytogenes]
Length = 488
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 8 QVLDLSANYNITSGSLTRL---------GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
QV DLS N+T + RL LA L NLK++DL IT + LA L NL+
Sbjct: 106 QVTDLSPLTNLTKITELRLSGNPLKDVSALAGLKNLKRMDLIYTDITDVTPLAGLSNLQV 165
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L+L N + LA+L+NLQ L Q L NL L TL+ D ++ I +
Sbjct: 166 LNLDINQITD--ITPLADLSNLQFLSFGSTQVSDLTPLTNLSKLTTLNAEDSKVSDISPL 223
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 26 LGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
LG A++T+ + ++DLD GITTI+GL L NL L+L N L L N
Sbjct: 58 LGKADVTDEVTQIDLDSITHLSAESAGITTIEGLQYLTNLSELELIDNQVTD--LSPLTN 115
Query: 77 LTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
LT + L LSGN LA L NLK +DL IT +
Sbjct: 116 LTKITELRLSGNPLKDVSALAGLKNLKRMDLIYTDITDV 154
>gi|85679262|gb|ABC72047.1| InlC2 [Listeria monocytogenes]
Length = 547
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL +L+L N + L L
Sbjct: 58 TATGKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGIQYLNNLISLELKDNQITN--LTPL 115
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 116 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 156
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 115 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 167
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L L N + LA LTNLQ L + Q LANL L L D I+ I
Sbjct: 168 LYLDLNQITD--ISPLAGLTNLQYLSIGNTQVSDLTPLANLSKLTNLRADDNKISDI 222
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 137 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITDISPLAGLTNLQYL 190
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA LPNL + L+D I+ +
Sbjct: 191 SIGNTQV--SDLTPLANLSKLTNLRADDNKISDISPLAGLPNLIEVHLKDNQISDV 244
>gi|239609314|gb|EEQ86301.1| protein phosphatase regulatory subunit Sds22 [Ajellomyces
dermatitidis ER-3]
Length = 351
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
LTNLK + L +TTI GL+ L+NLE L +S N ++ GL N TNL+VLD+S NQ
Sbjct: 216 LTNLKIISLPSNRLTTISGLSNLQNLEELYVSHNAI--TAISGLENNTNLRVLDISSNQ 272
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L +LT L++L L IT I+ + L NL+ + L SN ++ GL+NL NL+ L +S
Sbjct: 191 LDDLTALEELWLGKNKITEIKNIDALTNLKIISLPSNRL--TTISGLSNLQNLEELYVSH 248
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N GL N NL+ LD+ I+ ++ I T
Sbjct: 249 NAITAISGLENNTNLRVLDISSNQISKLENISHLT 283
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 18 ITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
+ S LT + GL+NL NL++L + IT I GL NL LD+SSN LE +++
Sbjct: 224 LPSNRLTTISGLSNLQNLEELYVSHNAITAISGLENNTNLRVLDISSNQI--SKLENISH 281
Query: 77 LTNLQVLDLSGNQ 89
LT+L+ L S NQ
Sbjct: 282 LTHLEELWASNNQ 294
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L L+ L+L I I+ L L LE L L N ++ + LTNL+++ L
Sbjct: 168 GLDGLKVLRNLELAANRIREIENLDDLTALEELWLGKNKI--TEIKNIDALTNLKIISLP 225
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ T GL+NL NL+ L + IT I G++ T
Sbjct: 226 SNRLTTISGLSNLQNLEELYVSHNAITAISGLENNT 261
>gi|443669801|ref|ZP_21134978.1| leucine Rich Repeat family protein [Microcystis aeruginosa
DIANCHI905]
gi|443329923|gb|ELS44694.1| leucine Rich Repeat family protein [Microcystis aeruginosa
DIANCHI905]
Length = 219
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
LTNL+KL L I + LA L NL L L N ++ + LANLTNL LDL NQ
Sbjct: 74 LTNLQKLSLVNNQIVDLTPLANLTNLTELRLRQNQIVN--VNALANLTNLTHLDLQTNQI 131
Query: 91 LTTLGLANLPNLKTLDLRDCGITTIQGI 118
+ LANL NL+ L L D I + I
Sbjct: 132 IDITSLANLTNLEVLFLSDNKIKDLTPI 159
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
LANLTNL +L L I + LA L NL LDL +N + + LANLTNL+VL LS
Sbjct: 92 PLANLTNLTELRLRQNQIVNVNALANLTNLTHLDLQTNQII--DITSLANLTNLEVLFLS 149
Query: 87 GNQ 89
N+
Sbjct: 150 DNK 152
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Query: 8 QVLDLSANYNITSGSLTRL---------GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
Q++DL+ N+T+ + RL LANLTNL LDL I I LA L NLE
Sbjct: 86 QIVDLTPLANLTNLTELRLRQNQIVNVNALANLTNLTHLDLQTNQIIDITSLANLTNLEV 145
Query: 59 LDLSSN 64
L LS N
Sbjct: 146 LFLSDN 151
>gi|418727611|ref|ZP_13286199.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
gi|409958969|gb|EKO22746.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
Length = 379
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 71/137 (51%), Gaps = 24/137 (17%)
Query: 1 LANLRYLQVLDLSANYNIT-----------------SGSLTRLG--LANLTNLKKLDLDG 41
+ L+ LQ LDLS N T S LT L + L NL+ L+L
Sbjct: 205 IGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRN 264
Query: 42 CGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLAN 98
+TT+ + + +L+NL++LDL SN E + L NLQVLDL NQ LTTL G+
Sbjct: 265 NRLTTLSKEIEQLQNLKSLDLGSNQLTTFPKE-IGQLKNLQVLDLGSNQ-LTTLPEGIGQ 322
Query: 99 LPNLKTLDLRDCGITTI 115
L NL+TLDL +TT+
Sbjct: 323 LKNLQTLDLDSNQLTTL 339
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ LQ L+L N T + L NLK LDL +TT + + +LKNL+ L
Sbjct: 251 IGQLKNLQTLNLRNNRLTTLSK----EIEQLQNLKSLDLGSNQLTTFPKEIGQLKNLQVL 306
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITT 114
DL SN L EG+ L NLQ LDL NQ LTTL + L NL+ L L + +++
Sbjct: 307 DLGSNQ-LTTLPEGIGQLKNLQTLDLDSNQ-LTTLPQEIGQLQNLQELFLNNNQLSS 361
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 9/118 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ L+ L+LS N T + L L+ L LD +TT+ Q + +L+NL++L
Sbjct: 159 IGQLKNLKSLNLSYNQIKTIPK----KIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 214
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
DLS+N L + + +L NLQ L L NQ LT L + L NL+TL+LR+ +TT+
Sbjct: 215 DLSTN-RLTTLPQEIGHLQNLQDLYLVSNQ-LTILPNEIGQLKNLQTLNLRNNRLTTL 270
>gi|423638533|ref|ZP_17614185.1| hypothetical protein IK7_04941, partial [Bacillus cereus VD156]
gi|401270849|gb|EJR76868.1| hypothetical protein IK7_04941, partial [Bacillus cereus VD156]
Length = 853
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L N++++ L + +IT G L +G LA L +++ L L I+ + L+++K ++ L
Sbjct: 255 LKNIKFISNLRQLKSLSITYGELEDIGPLAKLEHIEFLTLRNNKISDLSPLSQMKKIKML 314
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQG 117
DL+SNY ++ L + +L+ L ++ NQ N G+ L N+K L L + G+T I+
Sbjct: 315 DLNSNYI--KDIKPLFTVKSLRTLTVANNQISNDNLAGIEQLKNVKNLSLSNNGLTNIEH 372
Query: 118 I 118
I
Sbjct: 373 I 373
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 21/140 (15%)
Query: 1 LANLRYLQVLDLSANYN------ITSGSLTRLGLAN-------------LTNLKKLDLDG 41
L+ ++ +++LDL++NY T SL L +AN L N+K L L
Sbjct: 305 LSQMKKIKMLDLNSNYIKDIKPLFTVKSLRTLTVANNQISNDNLAGIEQLKNVKNLSLSN 364
Query: 42 CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
G+T I+ + +K L LDL+ N ++E L+ L+ +Q L+L N L++L +
Sbjct: 365 NGLTNIEHITSMKKLVELDLAKNEL--ENIEPLSRLSTVQSLNLEENYISDITPLSHLTD 422
Query: 102 LKTLDLRDCGITTIQGIQQF 121
L L L I ++ +Q+
Sbjct: 423 LYDLKLGSNEIRDVRPVQEL 442
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 10/74 (13%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLE---GLANLTNLQVL 83
GL +TNL+KL ++G G+ I+ ++ LK L +++S H +E L+ L NLQ L
Sbjct: 599 GLEYMTNLEKLTIEGVGLKNIEFISNLKQLNDVNVS-----HNQIEDTTPLSLLKNLQWL 653
Query: 84 DLSGN--QNLTTLG 95
+L+ N +++T LG
Sbjct: 654 NLTDNRIKDVTVLG 667
>gi|225862529|ref|YP_002747907.1| lpxtg-motif cell wall anchor domain protein [Bacillus cereus
03BB102]
gi|225789969|gb|ACO30186.1| lpxtg-motif cell wall anchor domain protein [Bacillus cereus
03BB102]
Length = 1186
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 8/123 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+ L L+ L++S N SL ++ +LTNL + + TIQG+ +LKNL L
Sbjct: 634 LSKLEKLEKLNISHNNVKNIESLFKMN--SLTNLNASN-NKINNATIQGIQQLKNLYVLI 690
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
L++N S+E ++ ++ L L+L GNQ + L+ L NL+ L+L D I+ I
Sbjct: 691 LNNNEI--SSVETISEISMLNELELKGNQVVDIKPLSKLKNLQWLNLSD---NKIKDISI 745
Query: 121 FTS 123
FTS
Sbjct: 746 FTS 748
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L N+ ++ L + +IT L + LA L N++ L L I+ + L+++K ++ L
Sbjct: 257 LDNIHFISKLRQLKSVSITYSELENIEPLAELENIEGLSLRNNKISNLSPLSQMKKIKIL 316
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQG 117
DLSSN + L +T+L+ L L+ NQ N G+ L +K L L + G+T I+
Sbjct: 317 DLSSNAI--KDITPLFTVTSLRDLALANNQISNANLAGIEQLKKVKNLSLSNNGLTNIEH 374
Query: 118 I 118
I
Sbjct: 375 I 375
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 21/140 (15%)
Query: 1 LANLRYLQVLDLSANYN------ITSGSLTRLGLAN-------------LTNLKKLDLDG 41
L+ ++ +++LDLS+N T SL L LAN L +K L L
Sbjct: 307 LSQMKKIKILDLSSNAIKDITPLFTVTSLRDLALANNQISNANLAGIEQLKKVKNLSLSN 366
Query: 42 CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
G+T I+ + +K L LDLS N ++E L+ L+ +Q L+L N L+ L
Sbjct: 367 NGLTNIEHITPMKKLVELDLSKNEL--ENIEPLSRLSTVQSLNLEENYISDITPLSQLTG 424
Query: 102 LKTLDLRDCGITTIQGIQQF 121
L L L I ++ +Q+
Sbjct: 425 LYDLKLGSNEIRDVRPVQEL 444
Score = 41.2 bits (95), Expect = 0.091, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G+ +TNL+ LDL+ + I ++ L+NL+++ L++N ++ L+ L L+ L++S
Sbjct: 589 GIEFMTNLENLDLEKIDLKDIDFISNLRNLKSVSLANNKI--ENIAPLSKLEKLEKLNIS 646
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGI--TTIQGIQQF 121
N L + +L L+ + I TIQGIQQ
Sbjct: 647 HNNVKNIESLFKMNSLTNLNASNNKINNATIQGIQQL 683
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+ L L+ + I ++KL+ L+++ ++ Y ++E LA L N++ L L
Sbjct: 240 GLEYMTNLENLMLEEVKLDNIHFISKLRQLKSVSIT--YSELENIEPLAELENIEGLSLR 297
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ L+ + +K LDL I I + TS
Sbjct: 298 NNKISNLSPLSQMKKIKILDLSSNAIKDITPLFTVTS 334
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
++ ++ L +L+L G + I+ L+KLKNL+ L+LS N S+ ++ L LSG
Sbjct: 702 ISEISMLNELELKGNQVVDIKPLSKLKNLQWLNLSDNKIKDISI--FTSMIQFFSLKLSG 759
Query: 88 NQNLTTLGLANLPNLKTLDLR 108
N+ + L + T+D+R
Sbjct: 760 NEIQDIKPIIQLSQIITIDIR 780
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 16 YNITSGSL----TRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSL 71
YN++ +L T+ L + LK D GI I G+ + NLE LDL +
Sbjct: 552 YNLSRTNLDAPITKEDLLGIKTLKITDGQSKGIKDISGIEFMTNLENLDLEKIDL--KDI 609
Query: 72 EGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
+ ++NL NL+ + L+ N+ L+ L L+ L++ + I+ + + S
Sbjct: 610 DFISNLRNLKSVSLANNKIENIAPLSKLEKLEKLNISHNNVKNIESLFKMNS 661
>gi|290892594|ref|ZP_06555587.1| InlC2 [Listeria monocytogenes FSL J2-071]
gi|404406716|ref|YP_006689431.1| internalin C2 [Listeria monocytogenes SLCC2376]
gi|290557903|gb|EFD91424.1| InlC2 [Listeria monocytogenes FSL J2-071]
gi|404240865|emb|CBY62265.1| internalin C2 (LPXTG motif) [Listeria monocytogenes SLCC2376]
Length = 548
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL +L+L N + L L
Sbjct: 59 TATGKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGIQYLNNLISLELKDNQITN--LTPL 116
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 117 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 157
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 116 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 168
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L L N + LA LTNLQ L + Q LANL L L D I+ I
Sbjct: 169 LYLDLNQITD--ISPLAGLTNLQYLSIGNTQVSDLTPLANLSKLTNLRADDNKISDI 223
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 138 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITDISPLAGLTNLQYL 191
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA LPNL + L+D I+ +
Sbjct: 192 SIGNTQV--SDLTPLANLSKLTNLRADDNKISDISPLAGLPNLIEVHLKDNQISDV 245
>gi|402889915|ref|XP_003908243.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 isoform 2
[Papio anubis]
Length = 332
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 1 LANLRYLQVLDLSAN--YNITS-GSLTRL--------------GLANLTNLKKLDLDGCG 43
L L L++LD+S N NI LTRL L+NL L+ L+L
Sbjct: 110 LEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNR 169
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
I I+ + L NLE+L L N L+ L LTNL VL + N+ GL NL NL+
Sbjct: 170 IRAIENIDTLTNLESLFLGKNKI--TKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLR 227
Query: 104 TLDLRDCGITTIQGIQ 119
L L GI I+G++
Sbjct: 228 ELYLSHNGIEVIEGLE 243
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL LQ+L+L +N I + + LTNL+ L L IT +Q L L NL L
Sbjct: 154 LSNLHQLQMLELGSNR-IRAIE----NIDTLTNLESLFLGKNKITKLQNLDALTNLTVLS 208
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ SN +EGL NL NL+ L LS N GL N L LD+ I I+ I
Sbjct: 209 MQSNRL--TKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISH 266
Query: 121 FTS 123
T
Sbjct: 267 LTE 269
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 7 LQVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
LQ LD N + S RL GL NL NL++L L GI I+GL L LD++
Sbjct: 195 LQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIA 254
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGN 88
SN +E +++LT LQ ++ N
Sbjct: 255 SNRI--KKIENISHLTELQEFWMNDN 278
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 37 LDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGL 96
+DL+ C I I+G LK ++ L L N L +E L L +L+ LDL NQ L
Sbjct: 53 VDLNHCRIGKIEGFEVLKKVKTLCLRQN--LIKCIENLEELQSLRELDLYDNQIKKIENL 110
Query: 97 ANLPNLKTLDLRDCGITTIQGIQQFT 122
L L+ LD+ + I+G+ + T
Sbjct: 111 EALTELEILDISFNLLRNIEGVDKLT 136
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LT L+ LD+ + I+G+ KL L+ L L +N +E L+NL LQ+L+L
Sbjct: 110 LEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKI--SKIENLSNLHQLQMLELGS 167
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ + L NL++L L IT +Q + T+
Sbjct: 168 NRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTN 203
>gi|260832388|ref|XP_002611139.1| hypothetical protein BRAFLDRAFT_88462 [Branchiostoma floridae]
gi|229296510|gb|EEN67149.1| hypothetical protein BRAFLDRAFT_88462 [Branchiostoma floridae]
Length = 761
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 61/123 (49%), Gaps = 11/123 (8%)
Query: 1 LANLRYLQVLDLSANYN--ITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNL 56
+ANL LQ LDLS N I +G+ T NL L++LDL I+ IQ +A L L
Sbjct: 151 IANLSRLQDLDLSENQILIIQAGTFT-----NLPGLQELDLSNNQISMIQAGAIANLSQL 205
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITT 114
+ L L N NL +LQ L+LS NQ + +ANLP L+ L L I+
Sbjct: 206 QELHLFQNNISMIQAGSFENLPHLQELELSYNQISVIQAGAIANLPQLQKLHLFQNNISM 265
Query: 115 IQG 117
IQ
Sbjct: 266 IQA 268
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 64/142 (45%), Gaps = 25/142 (17%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLG-------------------LANLTNLKKLDL 39
ANL LQ LDLS+N I +GS L NL L++L+L
Sbjct: 79 FANLPQLQELDLSSNQITMIQAGSFVNLPQLQDLQLYLNKITIIQAGTFVNLPQLQELEL 138
Query: 40 DGCGITTIQG--LAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ-NLTTLG- 95
I+ IQ +A L L+ LDLS N L NL LQ LDLS NQ ++ G
Sbjct: 139 SYNQISVIQAGAIANLSRLQDLDLSENQILIIQAGTFTNLPGLQELDLSNNQISMIQAGA 198
Query: 96 LANLPNLKTLDLRDCGITTIQG 117
+ANL L+ L L I+ IQ
Sbjct: 199 IANLSQLQELHLFQNNISMIQA 220
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQG--LAKLKNLE 57
+ANL LQ L L N NI S+ + G NL +L++L+L I+ IQ +A L L+
Sbjct: 199 IANLSQLQELHLFQN-NI---SMIQAGSFENLPHLQELELSYNQISVIQAGAIANLPQLQ 254
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG 95
L L N + ANL L LDL N+ L+ +G
Sbjct: 255 KLHLFQNNISMIQADAFANLPKLHCLDLRNNK-LSAIG 291
>gi|260791251|ref|XP_002590653.1| hypothetical protein BRAFLDRAFT_89454 [Branchiostoma floridae]
gi|229275849|gb|EEN46664.1| hypothetical protein BRAFLDRAFT_89454 [Branchiostoma floridae]
Length = 762
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAK--LKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
ANL L+KLDL IT IQ A L NL+ L LSSN +NL LQ+L+L
Sbjct: 112 FANLPQLEKLDLSFNQITIIQSSASENLINLKQLYLSSNQLTIIQPSAFSNLPRLQLLNL 171
Query: 86 SGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQ 116
S N+ N+ ANLP L+ L L +T IQ
Sbjct: 172 SNNKIRNIQPGTFANLPRLENLILSAINMTMIQ 204
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 1 LANLRYLQVLDLSAN-YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQ--GLAKLKNLE 57
ANL L+ LDLS N I S + NL NLK+L L +T IQ + L L+
Sbjct: 112 FANLPQLEKLDLSFNQITIIQSSASE----NLINLKQLYLSSNQLTIIQPSAFSNLPRLQ 167
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSG-NQNLTTLGL-ANLPNLKTLDLRDCGITTI 115
L+LS+N + ANL L+ L LS N + G+ +NLP L+ L L + IT I
Sbjct: 168 LLNLSNNKIRNIQPGTFANLPRLENLILSAINMTMIQPGVFSNLPRLQGLCLSNNEITMI 227
Query: 116 Q 116
Q
Sbjct: 228 Q 228
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Query: 27 GLANLTNLKKLDLDGCGITTIQ--GLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLD 84
NL L+KL L I Q A L LE LDLS N NL NL+ L
Sbjct: 87 AFPNLPRLQKLYLKRNQIKIFQICVFANLPQLEKLDLSFNQITIIQSSASENLINLKQLY 146
Query: 85 LSGNQNLTTL---GLANLPNLKTLDLRDCGITTIQ 116
LS NQ LT + +NLP L+ L+L + I IQ
Sbjct: 147 LSSNQ-LTIIQPSAFSNLPRLQLLNLSNNKIRNIQ 180
>gi|290979531|ref|XP_002672487.1| leucine-rich repeat domain protein [Naegleria gruberi]
gi|284086064|gb|EFC39743.1| leucine-rich repeat domain protein [Naegleria gruberi]
Length = 612
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN-LTNLQVLDLS 86
L L NL LDL+ CG+ I LAKL + L+L +NY L+ L + L NL+ L+
Sbjct: 399 LKKLDNLTALDLEDCGVKDITPLAKLTKITKLNLKNNYLKGEWLQKLVSYLPNLRKLNSE 458
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
GN+ + L+ L N++ L L+ + I+ +Q
Sbjct: 459 GNELTSLAPLSLLTNIQKLKLKSLKFSDIKEMQ 491
>gi|66813262|ref|XP_640810.1| hypothetical protein DDB_G0281091 [Dictyostelium discoideum AX4]
gi|60468842|gb|EAL66842.1| hypothetical protein DDB_G0281091 [Dictyostelium discoideum AX4]
Length = 589
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L +LT L+ L L+GC + +I+ L L L+L+ N + G L L++ L+ L LSG
Sbjct: 33 LKDLTELEILSLNGCSLQSIETLPIFSKLRKLELNDN-RISGGLSVLSDFEKLESLSLSG 91
Query: 88 NQNLTTLG----LANLPNLKTLDLRDCGIT 113
NQ + TLG L NL +L+ LDL C +T
Sbjct: 92 NQ-IKTLGDLEPLGNLQSLQFLDLFACPVT 120
>gi|355565348|gb|EHH21837.1| hypothetical protein EGK_04990 [Macaca mulatta]
Length = 346
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 1 LANLRYLQVLDLSAN--YNITS-GSLTRL--------------GLANLTNLKKLDLDGCG 43
L L L++LD+S N NI LTRL L+NL L+ L+L
Sbjct: 124 LEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNR 183
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
I I+ + L NLE+L L N L+ L LTNL VL + N+ GL NL NL+
Sbjct: 184 IRAIENIDTLTNLESLFLGKNKI--TKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLR 241
Query: 104 TLDLRDCGITTIQGIQ 119
L L GI I+G++
Sbjct: 242 ELYLSHNGIEVIEGLE 257
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL LQ+L+L +N I + + LTNL+ L L IT +Q L L NL L
Sbjct: 168 LSNLHQLQMLELGSNR-IRAIE----NIDTLTNLESLFLGKNKITKLQNLDALTNLTVLS 222
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ SN +EGL NL NL+ L LS N GL N L LD+ I I+ I
Sbjct: 223 MQSNRL--TKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISH 280
Query: 121 FTS 123
T
Sbjct: 281 LTE 283
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 7 LQVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
LQ LD N + S RL GL NL NL++L L GI I+GL L LD++
Sbjct: 209 LQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIA 268
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGN 88
SN +E +++LT LQ ++ N
Sbjct: 269 SNRI--KKIENISHLTELQEFWMNDN 292
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 37 LDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGL 96
+DL+ C I I+G LK ++ L L N L +E L L +L+ LDL NQ L
Sbjct: 67 VDLNHCRIGKIEGFEVLKKVKTLCLRQN--LIKCIENLEELQSLRELDLYDNQIKKIENL 124
Query: 97 ANLPNLKTLDLRDCGITTIQGIQQFT 122
L L+ LD+ + I+G+ + T
Sbjct: 125 EALTELEILDISFNLLRNIEGVDKLT 150
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LT L+ LD+ + I+G+ KL L+ L L +N +E L+NL LQ+L+L
Sbjct: 124 LEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKI--SKIENLSNLHQLQMLELGS 181
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ + L NL++L L IT +Q + T+
Sbjct: 182 NRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTN 217
>gi|347547843|ref|YP_004854171.1| putative internalin protein [Listeria ivanovii subsp. ivanovii PAM
55]
gi|346980914|emb|CBW84833.1| Putative internalin, with GW moduls [Listeria ivanovii subsp.
ivanovii PAM 55]
Length = 793
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 66/129 (51%), Gaps = 25/129 (19%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LA+L+ L+ L L N +T S GL NL +L + +D GI+ I+ L +L NL++L
Sbjct: 116 LADLKNLERLSLDGN-KVTDLS----GLENLVDLVYVSMDENGISDIRPLRRLANLDSLY 170
Query: 61 LSSNY-----YLHG-------SLEG--------LANLTNLQVLDLSGNQNLTTLGLANLP 100
L +N L G SLEG L LTNLQ L LS NQ + GLA L
Sbjct: 171 LDNNKLTDITPLSGLTKLTTLSLEGNQLNDIIALVGLTNLQNLYLSKNQIMDIRGLAALK 230
Query: 101 NLKTLDLRD 109
NL L+L D
Sbjct: 231 NLDVLELHD 239
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 36 KLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG 95
K+D D I +I+G+ L +L+ L L+ N S+ LA+L NL+ L L GN+ G
Sbjct: 80 KIDADDKKIKSIKGIENLTHLKNLFLNDNEISDISM--LADLKNLERLSLDGNKVTDLSG 137
Query: 96 LANLPNLKTLDLRDCGITTIQGIQQ 120
L NL +L + + + GI+ I+ +++
Sbjct: 138 LENLVDLVYVSMDENGISDIRPLRR 162
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G+ NLT+LK L L+ I+ I LA LKNLE L L N L GL NL +L + +
Sbjct: 93 GIENLTHLKNLFLNDNEISDISMLADLKNLERLSLDGNKVT--DLSGLENLVDLVYVSMD 150
Query: 87 GNQNLTTLGLANLPNLKTLDLRD---CGITTIQGIQQFTS 123
N L L NL +L L + IT + G+ + T+
Sbjct: 151 ENGISDIRPLRRLANLDSLYLDNNKLTDITPLSGLTKLTT 190
>gi|221327743|gb|ACM17562.1| NBS-LRR disease resistance protein family-1 [Oryza brachyantha]
Length = 1411
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 14/137 (10%)
Query: 1 LANLRYLQVLDLSANYNITS------------GSLTRLGLANLTNLKKLDLDGCGITTIQ 48
L +L LQ L+LS +NI +L +L NL+ L + + ++
Sbjct: 799 LGSLTNLQFLNLSKCHNIFENELAIEEKAEAISNLNKLQYLNLSKLVQYHIKSTHVSFFG 858
Query: 49 GLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLD 106
+ L NLE LDLS N YL + L L LDLSG + L T+ + + +LK LD
Sbjct: 859 CIKTLSNLEHLDLSGNDYLESLPDCFGILRKLHTLDLSGCRILKTVPASIGQIDSLKYLD 918
Query: 107 LRDCGITTIQGIQQFTS 123
C ++Q +
Sbjct: 919 TNGCSYLEWSTLRQLNN 935
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 41/104 (39%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 15 NYNITSGSLTRLGL----ANLTNLKKLDLDGC-GITTIQG-LAKLKNLEALDLSSNYYLH 68
NY I GS L + +L LDL GC GI + G KL+NL LDLS+ + L
Sbjct: 614 NYLILRGSSAIKALPESFGEMKSLMYLDLSGCSGIKKLPGSFGKLENLVHLDLSNCFGLT 673
Query: 69 GSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDC 110
E L NL+ LDLS N+ L L NL L+ L+L C
Sbjct: 674 CVSESFERLINLEYLDLSCCINIGDLNETLVNLLKLEYLNLSSC 717
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 52/114 (45%), Gaps = 17/114 (14%)
Query: 7 LQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITT--IQGLAKLKNLEALDLS 62
L DLS+N+ + + RL L NLK L+L G +K+L LDLS
Sbjct: 732 LGYFDLSSNFCV----IRRLPEALTRFNNLKYLNLSGWSKLEELPTSFGNMKSLIHLDLS 787
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLA---------NLPNLKTLDL 107
+ G E L +LTNLQ L+LS N+ LA NL L+ L+L
Sbjct: 788 KCSNIKGIPEALGSLTNLQFLNLSKCHNIFENELAIEEKAEAISNLNKLQYLNL 841
Score = 35.0 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 55/142 (38%), Gaps = 33/142 (23%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI------------- 47
A LR ++ +D T L +G ++ L+ LDL GC I +
Sbjct: 540 FAKLRAIRFMD------NTKLELRDIGFSSSKFLRVLDLSGCSIQRLPDCIGQFKLLRYL 593
Query: 48 -----------QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-- 94
+ + KL NL L L + + E + +L LDLSG + L
Sbjct: 594 NAPGVQYKNIPKSITKLSNLNYLILRGSSAIKALPESFGEMKSLMYLDLSGCSGIKKLPG 653
Query: 95 GLANLPNLKTLDLRDC-GITTI 115
L NL LDL +C G+T +
Sbjct: 654 SFGKLENLVHLDLSNCFGLTCV 675
>gi|114584231|ref|XP_001158701.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 isoform 15
[Pan troglodytes]
gi|410248198|gb|JAA12066.1| protein phosphatase 1, regulatory (inhibitor) subunit 7 [Pan
troglodytes]
gi|410355497|gb|JAA44352.1| protein phosphatase 1, regulatory (inhibitor) subunit 7 [Pan
troglodytes]
Length = 360
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 1 LANLRYLQVLDLSAN--YNITS-GSLTRL--------------GLANLTNLKKLDLDGCG 43
L L L++LD+S N NI LTRL L+NL L+ L+L
Sbjct: 138 LEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNR 197
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
I I+ + L NLE+L L N L+ L LTNL VL + N+ GL NL NL+
Sbjct: 198 IRAIENIDTLTNLESLFLGKNKI--TKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLR 255
Query: 104 TLDLRDCGITTIQGIQ 119
L L GI I+G++
Sbjct: 256 ELYLSHNGIEVIEGLE 271
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL LQ+L+L +N I + + LTNL+ L L IT +Q L L NL L
Sbjct: 182 LSNLHQLQMLELGSNR-IRAIE----NIDTLTNLESLFLGKNKITKLQNLDALTNLTVLS 236
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ SN +EGL NL NL+ L LS N GL N L LD+ I I+ I
Sbjct: 237 MQSNRL--TKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISH 294
Query: 121 FTS 123
T
Sbjct: 295 LTE 297
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 7 LQVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
LQ LD N + S RL GL NL NL++L L GI I+GL L LD++
Sbjct: 223 LQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIA 282
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGN 88
SN +E +++LT LQ ++ N
Sbjct: 283 SNRI--KKIENISHLTELQEFWMNDN 306
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LT L+ LD+ + I+G+ KL L+ L L +N +E L+NL LQ+L+L
Sbjct: 138 LEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKI--SKIENLSNLHQLQMLELGS 195
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ + L NL++L L IT +Q + T
Sbjct: 196 NRIRAIENIDTLTNLESLFLGKNKITKLQNLDALT 230
>gi|397483871|ref|XP_003813114.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 isoform 2
[Pan paniscus]
gi|426339154|ref|XP_004033525.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 isoform 2
[Gorilla gorilla gorilla]
gi|441669278|ref|XP_004092113.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 [Nomascus
leucogenys]
gi|4633066|gb|AAD26610.1| protein phosphatase-1 regulatory subunit 7 alpha2 [Homo sapiens]
gi|119591649|gb|EAW71243.1| protein phosphatase 1, regulatory subunit 7, isoform CRA_a [Homo
sapiens]
gi|194376498|dbj|BAG57395.1| unnamed protein product [Homo sapiens]
Length = 317
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 1 LANLRYLQVLDLSAN--YNITS-GSLTRL--------------GLANLTNLKKLDLDGCG 43
L L L++LD+S N NI LTRL L+NL L+ L+L
Sbjct: 95 LEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNR 154
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
I I+ + L NLE+L L N L+ L LTNL VL + N+ GL NL NL+
Sbjct: 155 IRAIENIDTLTNLESLFLGKNKI--TKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLR 212
Query: 104 TLDLRDCGITTIQGIQ 119
L L GI I+G++
Sbjct: 213 ELYLSHNGIEVIEGLE 228
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL LQ+L+L +N I + + LTNL+ L L IT +Q L L NL L
Sbjct: 139 LSNLHQLQMLELGSN-RIRAIE----NIDTLTNLESLFLGKNKITKLQNLDALTNLTVLS 193
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ SN +EGL NL NL+ L LS N GL N L LD+ I I+ I
Sbjct: 194 MQSNRL--TKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISH 251
Query: 121 FTS 123
T
Sbjct: 252 LTE 254
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 7 LQVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
LQ LD N + S RL GL NL NL++L L GI I+GL L LD++
Sbjct: 180 LQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIA 239
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGN 88
SN +E +++LT LQ ++ N
Sbjct: 240 SNRI--KKIENISHLTELQEFWMNDN 263
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LT L+ LD+ + I+G+ KL L+ L L +N +E L+NL LQ+L+L
Sbjct: 95 LEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKI--SKIENLSNLHQLQMLELGS 152
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ + L NL++L L IT +Q + T+
Sbjct: 153 NRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTN 188
>gi|344301505|gb|EGW31817.1| hypothetical protein SPAPADRAFT_67833 [Spathaspora passalidarum NRRL
Y-27907]
Length = 1319
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 64/115 (55%), Gaps = 9/115 (7%)
Query: 10 LDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHG 69
LDLS N NI+ + R +L++L +DL + + L++ +L L L++N +
Sbjct: 897 LDLSNN-NISDITSFR----DLSDLSMVDLSQNSLVRLNNLSRNIHLSELHLANNSIV-- 949
Query: 70 SLEGLANLTNLQVLDLSGNQNLTTLGLANL--PNLKTLDLRDCGITTIQGIQQFT 122
SL+GL L L +LD+SGN+ L + PNL+ L++ D IT++ G ++ T
Sbjct: 950 SLDGLQELVKLTILDVSGNKLSGKLDFSQFYWPNLQVLNISDNQITSLVGWEEVT 1004
>gi|159466430|ref|XP_001691412.1| hypothetical protein CHLREDRAFT_205679 [Chlamydomonas reinhardtii]
gi|158279384|gb|EDP05145.1| predicted protein [Chlamydomonas reinhardtii]
Length = 487
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 42/118 (35%), Positives = 57/118 (48%), Gaps = 10/118 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITT--IQGLAKLKNL 56
L L+ LQVLD+ N++ + L R LA +NL LDL +T + L +L L
Sbjct: 252 LPALKELQVLDIQRNWSFNNVQLARCLPALAAASNLSCLDLRASWVTDEGVAALGRLPGL 311
Query: 57 EALDLSSNY-----YLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRD 109
L LS + YLH L GL LT L + +L LA LPNL+ LD+ +
Sbjct: 312 RRLALSPQHEHWAKYLH-VLPGLTGLTGLVMGNLPSVPYQLVEALAALPNLRELDMSE 368
>gi|428306331|ref|YP_007143156.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
gi|428247866|gb|AFZ13646.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
Length = 1011
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 27 GLANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
+A LTNL +LDL IT I + +AKL NL LDL SN E +A LTNL LDL
Sbjct: 282 AIAKLTNLTQLDLHSNKITQIPEAIAKLTNLTQLDLRSNKITQIP-EAIAKLTNLTQLDL 340
Query: 86 SGNQNLTTLGLANLPNLKTLDLRDC 110
S N + N+P L+ L+ +D
Sbjct: 341 SDN------SITNIP-LEMLNSKDA 358
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 65/120 (54%), Gaps = 13/120 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITTI-QGLAKLKNLE 57
+A L L LDLS N +T++ +A LTNL +L L IT I + +AKL NL
Sbjct: 122 IAKLTNLTQLDLSNN------QITQIPEAIAKLTNLTQLVLFNNQITQIPEAIAKLTNLT 175
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGITTI 115
LS+N E +ANLTNL L LS NQ +T + +ANL NL LDL + IT I
Sbjct: 176 QFILSNNQITQIP-EAIANLTNLTQLILSNNQ-ITQIPEAIANLTNLTQLDLLNNKITQI 233
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
+ANLTNL +L L IT I + +A L NL LDL +N E +ANL NL LDL
Sbjct: 190 AIANLTNLTQLILSNNQITQIPEAIANLTNLTQLDLLNNKITQIP-EAIANLINLTQLDL 248
Query: 86 SGNQNLTTL--GLANLPNLKTLDLRDCGITTI 115
N+ +T + +A L NL L L D IT I
Sbjct: 249 LNNK-ITQIPEAIAKLTNLTQLILSDNKITQI 279
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITTI-QGLAKLKNLE 57
+A L L LDL +N +T++ +A LTNL +LDL IT I + +AKL NL
Sbjct: 283 IAKLTNLTQLDLHSN------KITQIPEAIAKLTNLTQLDLRSNKITQIPEAIAKLTNLT 336
Query: 58 ALDLSSNYYLHGSLEGL 74
LDLS N + LE L
Sbjct: 337 QLDLSDNSITNIPLEML 353
>gi|4506013|ref|NP_002703.1| protein phosphatase 1 regulatory subunit 7 [Homo sapiens]
gi|397483869|ref|XP_003813113.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 isoform 1
[Pan paniscus]
gi|426339152|ref|XP_004033524.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 isoform 1
[Gorilla gorilla gorilla]
gi|74762145|sp|Q15435.1|PP1R7_HUMAN RecName: Full=Protein phosphatase 1 regulatory subunit 7; AltName:
Full=Protein phosphatase 1 regulatory subunit 22
gi|1085028|emb|CAA90626.1| yeast sds22 homolog [Homo sapiens]
gi|4633067|gb|AAD26611.1| protein phosphatase-1 regulatory subunit 7 alpha1 [Homo sapiens]
gi|12654185|gb|AAH00910.1| Protein phosphatase 1, regulatory (inhibitor) subunit 7 [Homo
sapiens]
gi|54697128|gb|AAV38936.1| protein phosphatase 1, regulatory subunit 7 [Homo sapiens]
gi|61355994|gb|AAX41197.1| protein phosphatase 1 regulatory subunit 7 [synthetic construct]
gi|119591650|gb|EAW71244.1| protein phosphatase 1, regulatory subunit 7, isoform CRA_b [Homo
sapiens]
gi|168279119|dbj|BAG11439.1| protein phosphatase 1 regulatory subunit 7 [synthetic construct]
gi|1585165|prf||2124310A sds22 gene
Length = 360
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 1 LANLRYLQVLDLSAN--YNITS-GSLTRL--------------GLANLTNLKKLDLDGCG 43
L L L++LD+S N NI LTRL L+NL L+ L+L
Sbjct: 138 LEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNR 197
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
I I+ + L NLE+L L N L+ L LTNL VL + N+ GL NL NL+
Sbjct: 198 IRAIENIDTLTNLESLFLGKNKI--TKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLR 255
Query: 104 TLDLRDCGITTIQGIQ 119
L L GI I+G++
Sbjct: 256 ELYLSHNGIEVIEGLE 271
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL LQ+L+L +N I + + LTNL+ L L IT +Q L L NL L
Sbjct: 182 LSNLHQLQMLELGSN-RIRAIE----NIDTLTNLESLFLGKNKITKLQNLDALTNLTVLS 236
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ SN +EGL NL NL+ L LS N GL N L LD+ I I+ I
Sbjct: 237 MQSNRL--TKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISH 294
Query: 121 FTS 123
T
Sbjct: 295 LTE 297
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 7 LQVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
LQ LD N + S RL GL NL NL++L L GI I+GL L LD++
Sbjct: 223 LQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIA 282
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGN 88
SN +E +++LT LQ ++ N
Sbjct: 283 SNRI--KKIENISHLTELQEFWMNDN 306
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LT L+ LD+ + I+G+ KL L+ L L +N +E L+NL LQ+L+L
Sbjct: 138 LEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKI--SKIENLSNLHQLQMLELGS 195
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ + L NL++L L IT +Q + T
Sbjct: 196 NRIRAIENIDTLTNLESLFLGKNKITKLQNLDALT 230
>gi|332259738|ref|XP_003278941.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 isoform 2
[Nomascus leucogenys]
Length = 360
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 1 LANLRYLQVLDLSAN--YNITS-GSLTRL--------------GLANLTNLKKLDLDGCG 43
L L L++LD+S N NI LTRL L+NL L+ L+L
Sbjct: 138 LEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNR 197
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
I I+ + L NLE+L L N L+ L LTNL VL + N+ GL NL NL+
Sbjct: 198 IRAIENIDTLTNLESLFLGKNKI--TKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLR 255
Query: 104 TLDLRDCGITTIQGIQ 119
L L GI I+G++
Sbjct: 256 ELYLSHNGIEVIEGLE 271
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL LQ+L+L +N I + + LTNL+ L L IT +Q L L NL L
Sbjct: 182 LSNLHQLQMLELGSN-RIRAIE----NIDTLTNLESLFLGKNKITKLQNLDALTNLTVLS 236
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ SN +EGL NL NL+ L LS N GL N L LD+ I I+ I
Sbjct: 237 MQSNRL--TKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISH 294
Query: 121 FTS 123
T
Sbjct: 295 LTE 297
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 7 LQVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
LQ LD N + S RL GL NL NL++L L GI I+GL L LD++
Sbjct: 223 LQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIA 282
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGN 88
SN +E +++LT LQ ++ N
Sbjct: 283 SNRI--KKIENISHLTELQEFWMNDN 306
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LT L+ LD+ + I+G+ KL L+ L L +N +E L+NL LQ+L+L
Sbjct: 138 LEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKI--SKIENLSNLHQLQMLELGS 195
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ + L NL++L L IT +Q + T
Sbjct: 196 NRIRAIENIDTLTNLESLFLGKNKITKLQNLDALT 230
>gi|168052882|ref|XP_001778868.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669737|gb|EDQ56318.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 532
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 7/103 (6%)
Query: 21 GSLTRLG--LANLTNLKKLDLDGCG--ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
SLT L LANL++LK+L+L GC + A L +L+ L LS L LAN
Sbjct: 255 SSLTSLPNELANLSSLKRLNLSGCSNLTRSPNEFANLSSLKKLHLSGCSSLTSLPNELAN 314
Query: 77 LTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDC-GITTIQ 116
+++L L LSG +LT+L LAN+ +L LDL DC +T++Q
Sbjct: 315 ISSLDELYLSGCSSLTSLPNELANISSLLRLDLNDCSSLTSLQ 357
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 69/120 (57%), Gaps = 11/120 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCG-ITTIQG-LAKLKNL 56
LANL L+ L L+ + SLTRL LA L++L +LDL GC +T++ LA L +L
Sbjct: 216 LANLSSLKKLYLNNCF-----SLTRLPNKLAYLSSLIELDLGGCSSLTSLPNELANLSSL 270
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITT 114
+ L+LS L S ANL++L+ L LSG +LT+L LAN+ +L L L C T
Sbjct: 271 KRLNLSGCSNLTRSPNEFANLSSLKKLHLSGCSSLTSLPNELANISSLDELYLSGCSSLT 330
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 28 LANLTNLKKLDLDGCGITT--IQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
L NL++LK + L C T L L LE LDLS L LANL++L LDL
Sbjct: 24 LENLSSLKNIYLKNCSNLTRLPNKLTNLSVLEELDLSGCSSLTSLPNELANLSSLTRLDL 83
Query: 86 SGNQNLTTL--GLANLPNLKTLDLRDCG 111
SG +L L LAN+ +LK L L +C
Sbjct: 84 SGCSSLIILLNELANISSLKKLYLNNCS 111
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
Query: 21 GSLTRLG--LANLTNLKKLDLDGC-GITTIQG-LAKLKNLEALDLSSNYYLHGSLEGLAN 76
SLT L LA+L++L +LDL GC +T++ LA L +L+ L+LS L LAN
Sbjct: 135 SSLTSLPNELAHLSSLIELDLGGCLSLTSLPNELANLSSLKKLNLSGCSSLISLPNELAN 194
Query: 77 LTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDC 110
+++L L L+G +L +L LANL +LK L L +C
Sbjct: 195 ISSLDELYLNGCLSLISLPNELANLSSLKKLYLNNC 230
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 27/132 (20%)
Query: 1 LANLRYLQVLDLSANYNITS--------GSLTRLG---------------LANLTNLKKL 37
L NL L+ L+LS N+T+ SLTRL L NL++L+ L
Sbjct: 360 LENLSSLKELNLSGCSNLTNLPKELANFSSLTRLKHNLSGCSNLISLPNELENLSSLEDL 419
Query: 38 DLDGCG-ITTIQG-LAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL- 94
+L GC +T++ LA L + E L LSS L LANL++L+ L LSG +LT+L
Sbjct: 420 NLSGCSSLTSLPNELANLSSFERLYLSSCSSLTSLPNELANLSSLERLYLSGCSSLTSLP 479
Query: 95 -GLANLPNLKTL 105
GL NL +LK L
Sbjct: 480 NGLENLSSLKVL 491
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 60/111 (54%), Gaps = 11/111 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCG-ITTIQG-LAKLKNL 56
ANL L+ L LS SLT L LAN+++L +L L GC +T++ LA + +L
Sbjct: 288 FANLSSLKKLHLSG-----CSSLTSLPNELANISSLDELYLSGCSSLTSLPNELANISSL 342
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTL 105
LDL+ L L NL++L+ L+LSG NLT L LAN +L L
Sbjct: 343 LRLDLNDCSSLTSLQNKLENLSSLKELNLSGCSNLTNLPKELANFSSLTRL 393
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 6/98 (6%)
Query: 23 LTRLG--LANLTNLKKLDLDGCG-ITTIQG-LAKLKNLEALDLSSNYYLHGSLEGLANLT 78
LTRL L NL+ L++LDL GC +T++ LA L +L LDLS L L LAN++
Sbjct: 41 LTRLPNKLTNLSVLEELDLSGCSSLTSLPNELANLSSLTRLDLSGCSSLIILLNELANIS 100
Query: 79 NLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITT 114
+L+ L L+ NLT L L L +L+ + L C T
Sbjct: 101 SLKKLYLNNCSNLTRLPNKLTKLFSLEGIFLHHCSSLT 138
>gi|380798617|gb|AFE71184.1| protein phosphatase 1 regulatory subunit 7, partial [Macaca
mulatta]
Length = 348
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 1 LANLRYLQVLDLSAN--YNITS-GSLTRL--------------GLANLTNLKKLDLDGCG 43
L L L++LD+S N NI LTRL L+NL L+ L+L
Sbjct: 126 LEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNR 185
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
I I+ + L NLE+L L N L+ L LTNL VL + N+ GL NL NL+
Sbjct: 186 IRAIENIDTLTNLESLFLGKNKI--TKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLR 243
Query: 104 TLDLRDCGITTIQGIQ 119
L L GI I+G++
Sbjct: 244 ELYLSHNGIEVIEGLE 259
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL LQ+L+L +N I + + LTNL+ L L IT +Q L L NL L
Sbjct: 170 LSNLHQLQMLELGSNR-IRAIE----NIDTLTNLESLFLGKNKITKLQNLDALTNLTVLS 224
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ SN +EGL NL NL+ L LS N GL N L LD+ I I+ I
Sbjct: 225 MQSNRL--TKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISH 282
Query: 121 FTS 123
T
Sbjct: 283 LTE 285
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 7 LQVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
LQ LD N + S RL GL NL NL++L L GI I+GL L LD++
Sbjct: 211 LQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIA 270
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGN 88
SN +E +++LT LQ ++ N
Sbjct: 271 SNRI--KKIENISHLTELQEFWMNDN 294
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 37 LDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGL 96
+DL+ C I I+G LK ++ L L N L +E L L +L+ LDL NQ L
Sbjct: 69 VDLNHCRIGKIEGFEVLKKVKTLCLRQN--LIKCIENLEELQSLRELDLYDNQIKKIENL 126
Query: 97 ANLPNLKTLDLRDCGITTIQGIQQFT 122
L L+ LD+ + I+G+ + T
Sbjct: 127 EALTELEILDISFNLLRNIEGVDKLT 152
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L LT L+ LD+ + I+G+ KL L+ L L +N +E L+NL LQ+L+L
Sbjct: 125 NLEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKI--SKIENLSNLHQLQMLELG 182
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ + L NL++L L IT +Q + T+
Sbjct: 183 SNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTN 219
>gi|260820479|ref|XP_002605562.1| hypothetical protein BRAFLDRAFT_239771 [Branchiostoma floridae]
gi|229290896|gb|EEN61572.1| hypothetical protein BRAFLDRAFT_239771 [Branchiostoma floridae]
Length = 240
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN-- 88
TNL+ L L G+T+++G KL +L+ L+LS N + G L L+ L L+LSGN
Sbjct: 37 FTNLEALSLINVGLTSLKGFPKLPSLKKLELSDN-RIQGGLNLLSGSGKLTHLNLSGNKI 95
Query: 89 QNLTTL-GLANLPNLKTLDLRDCGITTIQGIQQ 120
++L TL L + LK LDL +C +T I+ ++
Sbjct: 96 KDLETLEPLKDFQTLKNLDLFNCEVTQIENYRE 128
>gi|195472449|ref|XP_002088513.1| GE12011 [Drosophila yakuba]
gi|194174614|gb|EDW88225.1| GE12011 [Drosophila yakuba]
Length = 812
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSNY 65
QVLD+S N + + S + ANL NL+KL L C I I+ L NL LDLS N
Sbjct: 125 QVLDMSGN-KLQTLSNEQFIRANLLNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNL 183
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTI 115
+ L ++ +L+ L L+ N + + N P+L LDL C I TI
Sbjct: 184 LVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNTPSLHKLDLSHCDIQTI 235
>gi|357468851|ref|XP_003604710.1| Receptor-like protein kinase [Medicago truncatula]
gi|355505765|gb|AES86907.1| Receptor-like protein kinase [Medicago truncatula]
Length = 942
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQGLAKLKNLEAL 59
A L++LDL N I GSL + +L LK L L + +I+GL LK+L L
Sbjct: 106 FAKFSRLELLDLDGNQFI--GSLHVEDVQHLKKLKMLSLSYNQMNGSIEGLCNLKDLVEL 163
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
D+S N + E L+NLTNL++LDLS N
Sbjct: 164 DISKNMFGAKLPECLSNLTNLRILDLSHN 192
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L L+ LDLS NY + S L+ L GL LT LK L + + QG ++ K LE L
Sbjct: 8 FPRLEKLETLDLSDNYYLNSSILSSLNGLTALTTLK-LGSNSMKNFSAQGFSRSKELEVL 66
Query: 60 DLSSNYY---LHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL 107
DLS N + SL G +L +L + D N +L+TL A L+ LDL
Sbjct: 67 DLSHNELNCNIITSLYGFISLRSLILRDNKFNCSLSTLDFAKFSRLELLDL 117
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 47 IQGLAKLKNLEALDLSSNYYLHGS-LEGLANLTNLQVLDLSGN--QNLTTLGLANLPNLK 103
+G +L+ LE LDLS NYYL+ S L L LT L L L N +N + G + L+
Sbjct: 5 FEGFPRLEKLETLDLSDNYYLNSSILSSLNGLTALTTLKLGSNSMKNFSAQGFSRSKELE 64
Query: 104 TLDLR----DCGITT 114
LDL +C I T
Sbjct: 65 VLDLSHNELNCNIIT 79
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 9/112 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDG--CGITTIQGLAKLKNLEA 58
+ +L+ L++L LS YN +GS+ GL NL +L +LD+ G + L+ L NL
Sbjct: 131 VQHLKKLKMLSLS--YNQMNGSIE--GLCNLKDLVELDISKNMFGAKLPECLSNLTNLRI 186
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ---NLTTLGLANLPNLKTLDL 107
LDLS N + ++NLT+L L L N + + + LAN NL+ L +
Sbjct: 187 LDLSHNLFSGNFPSFISNLTSLTFLSLYENYMQGSFSLIILANHSNLQHLHI 238
>gi|114584240|ref|XP_001158513.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 isoform 12
[Pan troglodytes]
Length = 317
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 1 LANLRYLQVLDLSAN--YNITS-GSLTRL--------------GLANLTNLKKLDLDGCG 43
L L L++LD+S N NI LTRL L+NL L+ L+L
Sbjct: 95 LEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNR 154
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
I I+ + L NLE+L L N L+ L LTNL VL + N+ GL NL NL+
Sbjct: 155 IRAIENIDTLTNLESLFLGKNKI--TKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLR 212
Query: 104 TLDLRDCGITTIQGIQ 119
L L GI I+G++
Sbjct: 213 ELYLSHNGIEVIEGLE 228
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL LQ+L+L +N I + + LTNL+ L L IT +Q L L NL L
Sbjct: 139 LSNLHQLQMLELGSNR-IRAIE----NIDTLTNLESLFLGKNKITKLQNLDALTNLTVLS 193
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ SN +EGL NL NL+ L LS N GL N L LD+ I I+ I
Sbjct: 194 MQSNRL--TKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISH 251
Query: 121 FTS 123
T
Sbjct: 252 LTE 254
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 7 LQVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
LQ LD N + S RL GL NL NL++L L GI I+GL L LD++
Sbjct: 180 LQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIA 239
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGN 88
SN +E +++LT LQ ++ N
Sbjct: 240 SNRI--KKIENISHLTELQEFWMNDN 263
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L LT L+ LD+ + I+G+ KL L+ L L +N +E L+NL LQ+L+L
Sbjct: 94 NLEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKI--SKIENLSNLHQLQMLELG 151
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ + L NL++L L IT +Q + T+
Sbjct: 152 SNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTN 188
>gi|46445832|ref|YP_007197.1| F-box protein [Candidatus Protochlamydia amoebophila UWE25]
gi|46399473|emb|CAF22922.1| putative F-box protein [Candidatus Protochlamydia amoebophila
UWE25]
Length = 329
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 55/109 (50%), Gaps = 20/109 (18%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LA L L+ L+LS N+T L L L L L+ LDL GC T GLA+L+ L AL
Sbjct: 230 LAPLEALKHLNLSECDNLTDAGLAHLTL--LIALQYLDLKGCAKLTDAGLARLRPLVALQ 287
Query: 61 LSSNYYLHGSLEGLANLTN-----------LQVLDLSGNQNLTTLGLAN 98
H +L+G NLT+ LQ LDL G NLT GLA+
Sbjct: 288 -------HLNLKGCDNLTDIGLAHLRPLVALQHLDLDGCNNLTDAGLAH 329
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 56/113 (49%), Gaps = 13/113 (11%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA---LDLSS 63
++ + S N +T L L L N NLK L L C T GLA L LEA L+LS
Sbjct: 186 IEAIHFSDNVYLTDAHL--LTLKNCKNLKVLQLQACRNLTDVGLAHLAPLEALKHLNLSE 243
Query: 64 NYYLHGSLEGLANLT---NLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDC 110
L + GLA+LT LQ LDL G LT GLA L L+ L+L+ C
Sbjct: 244 CDNLTDA--GLAHLTLLIALQYLDLKGCAKLTDAGLARLRPLVALQHLNLKGC 294
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 56 LEALDLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCG 111
+EA+ S N YL L L N NL+VL L +NLT +GLA+L LK L+L +C
Sbjct: 186 IEAIHFSDNVYLTDAHLLTLKNCKNLKVLQLQACRNLTDVGLAHLAPLEALKHLNLSECD 245
Query: 112 ITTIQGIQQFT 122
T G+ T
Sbjct: 246 NLTDAGLAHLT 256
>gi|1736918|gb|AAC47404.1| KEK1 precursor [Drosophila melanogaster]
Length = 880
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSNY 65
QVLD+S N + + S + ANL NL+KL L C I I+ L NL LDLS N
Sbjct: 124 QVLDMSGN-KLQTLSNEQFIRANLLNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNL 182
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
+ L ++ +L+ L L+ N + + N P+L LDL C I TI Q F
Sbjct: 183 LVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNTPSLHKLDLSHCDIQTISA-QAF 239
>gi|423398544|ref|ZP_17375745.1| hypothetical protein ICU_04238, partial [Bacillus cereus BAG2X1-1]
gi|401647022|gb|EJS64634.1| hypothetical protein ICU_04238, partial [Bacillus cereus BAG2X1-1]
Length = 779
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL + NL+KL L +T I +++L+ L+ LDLSSN L S++ ++NL NL +L L
Sbjct: 238 GLEYMKNLEKLTLRETNVTDISAISELRYLKFLDLSSN--LIESIQPVSNLENLDMLFLR 295
Query: 87 GNQNLTTLGLANLPNLKTLDL 107
N+ L+ + +KTLDL
Sbjct: 296 DNKIADLTPLSQMKKIKTLDL 316
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 59/101 (58%), Gaps = 8/101 (7%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL + NL+ L L+G G+ I+ ++ LK L A+++S N + L++L NLQ L+L+
Sbjct: 588 GLEYMVNLESLTLEGVGLKNIEFISNLKQLNAMNVSHNQI--EDITPLSSLKNLQWLNLA 645
Query: 87 GN--QNLTTLG-LANLPNLKTL--DLRDCGITTIQGIQQFT 122
N ++++ LG + +L +LK ++RD IQ Q FT
Sbjct: 646 DNRVKDVSVLGSMLDLISLKLAGNEIRDVS-PLIQLGQWFT 685
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 41 GCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLP 100
G GI I GL +KNLE L L + ++ L L+ LDLS N + ++NL
Sbjct: 230 GEGINEIAGLEYMKNLEKLTLRETNV--TDISAISELRYLKFLDLSSNLIESIQPVSNLE 287
Query: 101 NLKTLDLRDCGITTIQGIQQF 121
NL L LRD I + + Q
Sbjct: 288 NLDMLFLRDNKIADLTPLSQM 308
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 7/123 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
++ LRYL+ LDLS+N I S ++NL NL L L I + L+++K ++ LD
Sbjct: 261 ISELRYLKFLDLSSNL-IESIQ----PVSNLENLDMLFLRDNKIADLTPLSQMKKIKTLD 315
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
L N L L + +++ L L+ NQ G+ L N+K L + + I+ ++ I +
Sbjct: 316 LIGNNI--KDLTPLFTVASVKELYLANNQISNLSGIEKLNNVKLLWIGNNQISDVEPISK 373
Query: 121 FTS 123
+
Sbjct: 374 MSK 376
>gi|395538088|ref|XP_003771018.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and IQ
domain-containing protein 1 [Sarcophilus harrisii]
Length = 1966
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L N + L+ +D+ N + + NL NL L L+ +T+ GL NL+ ++
Sbjct: 1134 LNNCKKLKYIDVQEN------QIQVINCENLENLCILLLNDNELTSFHGLDDCSNLQNIE 1187
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
+S+N + GL +L +LQ L + NQ ++T GL ++P + LD +T ++GI+
Sbjct: 1188 VSNNKITR--IGGLESLKSLQQLIVDHNQLISTRGLCSVPTIMYLDCSYNNLTKVEGIK 1244
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L+ T+L+ L L CG+T ++GL K L+ +D+ N + E NL NL +L L+
Sbjct: 1112 LSECTSLQFLSLRRCGLTALEGLNNCKKLKYIDVQENQIQVINCE---NLENLCILLLND 1168
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ + GL + NL+ +++ + IT I G++ S
Sbjct: 1169 NELTSFHGLDDCSNLQNIEVSNNKITRIGGLESLKS 1204
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 15 NYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEG 73
N +++ +TR+G L +L +L++L +D + + +GL + + LD S N +EG
Sbjct: 1185 NIEVSNNKITRIGGLESLKSLQQLIVDHNQLISTRGLCSVPTIMYLDCSYNNLT--KVEG 1242
Query: 74 LANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
+ + LQ+L L GN L N L+ L L D I+T++ I +
Sbjct: 1243 IKDCGLLQILKLQGNYLTELPSLENQVLLRELYLDDNSISTMEIISSY 1290
>gi|402889913|ref|XP_003908242.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 isoform 1
[Papio anubis]
gi|387542688|gb|AFJ71971.1| protein phosphatase 1 regulatory subunit 7 [Macaca mulatta]
Length = 360
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 1 LANLRYLQVLDLSAN--YNITS-GSLTRL--------------GLANLTNLKKLDLDGCG 43
L L L++LD+S N NI LTRL L+NL L+ L+L
Sbjct: 138 LEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNR 197
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
I I+ + L NLE+L L N L+ L LTNL VL + N+ GL NL NL+
Sbjct: 198 IRAIENIDTLTNLESLFLGKNKI--TKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLR 255
Query: 104 TLDLRDCGITTIQGIQ 119
L L GI I+G++
Sbjct: 256 ELYLSHNGIEVIEGLE 271
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL LQ+L+L +N I + + LTNL+ L L IT +Q L L NL L
Sbjct: 182 LSNLHQLQMLELGSNR-IRAIE----NIDTLTNLESLFLGKNKITKLQNLDALTNLTVLS 236
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ SN +EGL NL NL+ L LS N GL N L LD+ I I+ I
Sbjct: 237 MQSNRL--TKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISH 294
Query: 121 FTS 123
T
Sbjct: 295 LTE 297
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 7 LQVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
LQ LD N + S RL GL NL NL++L L GI I+GL L LD++
Sbjct: 223 LQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIA 282
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGN 88
SN +E +++LT LQ ++ N
Sbjct: 283 SNRI--KKIENISHLTELQEFWMNDN 306
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 37 LDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGL 96
+DL+ C I I+G LK ++ L L N L +E L L +L+ LDL NQ L
Sbjct: 81 VDLNHCRIGKIEGFEVLKKVKTLCLRQN--LIKCIENLEELQSLRELDLYDNQIKKIENL 138
Query: 97 ANLPNLKTLDLRDCGITTIQGIQQFT 122
L L+ LD+ + I+G+ + T
Sbjct: 139 EALTELEILDISFNLLRNIEGVDKLT 164
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LT L+ LD+ + I+G+ KL L+ L L +N +E L+NL LQ+L+L
Sbjct: 138 LEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKI--SKIENLSNLHQLQMLELGS 195
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ + L NL++L L IT +Q + T
Sbjct: 196 NRIRAIENIDTLTNLESLFLGKNKITKLQNLDALT 230
>gi|225445122|ref|XP_002283839.1| PREDICTED: protein phosphatase 1 regulatory subunit pprA [Vitis
vinifera]
gi|297738769|emb|CBI28014.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 25 RLGLANLTNLK---KLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQ 81
R+ + NL LK K+ L +T+++G LE L LS N +EGL+ L NL+
Sbjct: 191 RIRVVNLCGLKCIEKISLQSNRLTSMKGFEDCVALEELYLSHNGI--AKMEGLSTLVNLR 248
Query: 82 VLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
VLD S N+ + NL L+ L L D IT+++GI +
Sbjct: 249 VLDASSNKLTAVDDIENLTQLEDLWLNDNQITSLEGIAE 287
>gi|153939062|ref|YP_001391282.1| internalin [Clostridium botulinum F str. Langeland]
gi|152934958|gb|ABS40456.1| putative internalin [Clostridium botulinum F str. Langeland]
Length = 331
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
++ L NL+ L++ C + + + LK L+ LD+S+N +L GL NLTNL+ L +S
Sbjct: 141 VSTLKNLENLEIVDCKLNDVSIVKNLKRLKRLDISNNEI--SNLNGLENLTNLKELYMSN 198
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N + NL L LD+ D IT+I+ ++ S
Sbjct: 199 NNIANLKPIHNLLKLTNLDISDNKITSIKELKNMKS 234
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 10/122 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL L+++D N S+ + NL LK+LD+ I+ + GL L NL+ L
Sbjct: 144 LKNLENLEIVDCKLN----DVSIVK----NLKRLKRLDISNNEISNLNGLENLTNLKELY 195
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+S+N +L+ + NL L LD+S N+ + L N+ ++K L++ + ++ ++GI+
Sbjct: 196 MSNNNI--ANLKPIHNLLKLTNLDISDNKITSIKELKNMKSIKELNICNNNLSNLEGIEN 253
Query: 121 FT 122
+
Sbjct: 254 MS 255
>gi|197098176|ref|NP_001124579.1| protein phosphatase 1 regulatory subunit 7 [Pongo abelii]
gi|75071006|sp|Q5RFS7.1|PP1R7_PONAB RecName: Full=Protein phosphatase 1 regulatory subunit 7; AltName:
Full=Protein phosphatase 1 regulatory subunit 22
gi|55725025|emb|CAH89380.1| hypothetical protein [Pongo abelii]
Length = 360
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL LQ+L+L +N I + + LTNL+ L L IT +Q L L NL L
Sbjct: 182 LSNLHQLQMLELGSNR-IRAIE----NIDTLTNLESLFLGKNKITKLQNLDALTNLTVLS 236
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ SN +EGL NL NLQ L LS N GL N L LD+ I I+ I
Sbjct: 237 MQSNRL--TKIEGLQNLVNLQELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISH 294
Query: 121 FTS 123
T
Sbjct: 295 LTE 297
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 7 LQVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
LQ LD N + S RL GL NL NL++L L GI I+GL L LD++
Sbjct: 223 LQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLQELYLSHNGIEVIEGLENNNKLTMLDIA 282
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGN 88
SN +E +++LT Q ++ N
Sbjct: 283 SNRI--KKIENISHLTEPQEFWMNDN 306
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LT L+ LD+ + I+G+ K+ L+ L L +N +E L+NL LQ+L+L
Sbjct: 138 LEALTELEILDISFNLLRNIEGVDKVTQLKKLFLVNNKI--SKIENLSNLHQLQMLELGS 195
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ + L NL++L L IT +Q + T
Sbjct: 196 NRIRAIENIDTLTNLESLFLGKNKITKLQNLDALT 230
>gi|403364174|gb|EJY81843.1| Leucine-rich repeat-containing protein 9 [Oxytricha trifallax]
Length = 1629
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 33 NLKKLDL-DGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL 91
NL+KL L D C +T I+GL+K K LE L L N +EG+ L L+ LDL N+
Sbjct: 1019 NLRKLQLIDNC-LTKIEGLSKCKLLEELSLEKNKL--QQIEGVGQLRYLKKLDLGCNRIK 1075
Query: 92 TTLGLANLPNLKTLDLRDCGITTIQGIQ 119
GLA L NL L + D I+ + G++
Sbjct: 1076 RIEGLAQLENLTQLSMEDNEISNLDGLE 1103
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L+ TN+K L L GI+ I+GL K+ NLE + LS N L +++GL NL+ L L+
Sbjct: 49 LSYFTNIKTLTLINQGISEIEGLDKMVNLEQMWLSEN--LIENIKGLDKCKNLRDLFLTA 106
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQG 117
N+ GL NL NL+ L L + I ++
Sbjct: 107 NRIKRVRGLDNLINLEKLWLDENRIENLES 136
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 17 NITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
N+ S + ++ L L NL L L I I+GL + K L+ LDL+ N+ +EGL
Sbjct: 789 NLFSNRVKKIKCLEKLVNLNTLILSFNEIEMIEGLQECKVLKRLDLNHNFI--RKIEGLD 846
Query: 76 NLTNLQVLDLSGN 88
N NLQ L+L+ N
Sbjct: 847 NKVNLQTLNLTNN 859
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL + NL+++ L I I+GL K KNL L L++N + GL NL NL+ L L
Sbjct: 70 GLDKMVNLEQMWLSENLIENIKGLDKCKNLRDLFLTANRI--KRVRGLDNLINLEKLWLD 127
Query: 87 GN--QNLTTLGLANLPNLKTLDL 107
N +NL + G++ L LK L++
Sbjct: 128 ENRIENLES-GMSCLVKLKELNV 149
>gi|195351125|ref|XP_002042087.1| GM25965 [Drosophila sechellia]
gi|194123911|gb|EDW45954.1| GM25965 [Drosophila sechellia]
Length = 880
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSNY 65
QVLD+S N + + S + ANL NL+KL L C I I+ L NL LDLS N
Sbjct: 124 QVLDMSGN-KLQTLSNEQFIRANLLNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNL 182
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTI 115
+ L ++ +L+ L L+ N + + N P+L LDL C I TI
Sbjct: 183 LVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNTPSLHKLDLSHCDIQTI 234
>gi|442627668|ref|NP_523559.3| kekkon-1 [Drosophila melanogaster]
gi|440213755|gb|AAF53225.3| kekkon-1 [Drosophila melanogaster]
Length = 880
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSNY 65
QVLD+S N + + S + ANL NL+KL L C I I+ L NL LDLS N
Sbjct: 124 QVLDMSGN-KLQTLSNEQFIRANLLNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNL 182
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
+ L ++ +L+ L L+ N + + N P+L LDL C I TI Q F
Sbjct: 183 LVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNTPSLHKLDLSHCDIQTISA-QAF 239
>gi|15896519|ref|NP_349868.1| ChW repeat-containing protein [Clostridium acetobutylicum ATCC 824]
gi|337738478|ref|YP_004637925.1| ChW repeat-containing protein [Clostridium acetobutylicum DSM 1731]
gi|384459988|ref|YP_005672408.1| putative surface protein, responsible for cell interaction;
contains cell adhesion domain and ChW-repeats
[Clostridium acetobutylicum EA 2018]
gi|15026350|gb|AAK81208.1|AE007823_2 Possible surface protein, responsible for cell interaction;
contains cell adhesion domain and ChW-repeats
[Clostridium acetobutylicum ATCC 824]
gi|325510677|gb|ADZ22313.1| putative surface protein, responsible for cell interaction;
contains cell adhesion domain and ChW-repeats
[Clostridium acetobutylicum EA 2018]
gi|336291611|gb|AEI32745.1| ChW repeat-containing protein [Clostridium acetobutylicum DSM 1731]
Length = 874
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
+ANL L+ + LS N NI+S LA LT LK L LD GI+ I L+ L NL
Sbjct: 682 VANLTNLESISLSYNQVNNISS-------LAKLTKLKSLMLDHTGISDISSLSGLTNLNY 734
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L + N + L NLTNL L +S N+ + NL NL LD+ + I+ I I
Sbjct: 735 LGVQDNNI--EDITSLKNLTNLANLKISQNKISNVDAIGNLTNLTLLDMNNNQISNINAI 792
Query: 119 QQFT 122
+ T
Sbjct: 793 KNST 796
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA + NL ++ L+ IT+I+ L NL L LS N + +ANLTNL+ + LS
Sbjct: 638 LAKMKNLSRVSLNYNNITSIEPLKSSTNLVDLVLSGNKI--SDITPVANLTNLESISLSY 695
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LA L LK+L L GI+ I + T
Sbjct: 696 NQVNNISSLAKLTKLKSLMLDHTGISDISSLSGLT 730
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 16 YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
YN +T LG+ T + LD G+ +L NL+ L L NY L ++
Sbjct: 503 YNTDVNKITSLGIIKDTVINSLD----------GIEQLSNLKQLWL--NYGNVTDLTPIS 550
Query: 76 NLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
L+NL++L L+G+ ++ + NL NL LD+ + I+
Sbjct: 551 KLSNLKILSLNGDTDIDISPIGNLTNLNQLDIGESKIS 588
>gi|456823284|gb|EMF71754.1| leucine rich repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 455
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 67/120 (55%), Gaps = 13/120 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTIQ-GLAKLKNLE 57
+ LR LQ LDLS N SLT L + L NL++LDL + T+ + +LKNL+
Sbjct: 90 IGQLRNLQELDLSFN------SLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQ 143
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
LDL+SN L + + L NLQ LDL NQ LTTL + L NLKTL+ +TT+
Sbjct: 144 ELDLNSN-KLTTLPKEIRQLRNLQELDLHRNQ-LTTLPKEIGQLQNLKTLNSIVTQLTTL 201
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ LQ LDL N T + L NL++LDL +TT+ + + +L+NL+ L
Sbjct: 251 IGQLQNLQWLDLHQNQLTTLPK----EIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQEL 306
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG 95
L N L + + L NL+VLDL NQ LTTL
Sbjct: 307 CLDENQ-LTTLPKEIEQLQNLRVLDLDNNQ-LTTLP 340
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 28 LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+ L NL+ LDLD +TT+ + + +L++L+ L L SN L + + L NLQVL L
Sbjct: 320 IEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNR-LSTLPKEIGQLQNLQVLGLI 378
Query: 87 GNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
NQ LTTL + L NL+ L L + +TT
Sbjct: 379 SNQ-LTTLPKEIGQLQNLQELCLDENQLTTF 408
>gi|403341856|gb|EJY70245.1| Leucine-rich repeat-containing protein 9 [Oxytricha trifallax]
Length = 1628
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 33 NLKKLDL-DGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL 91
NL+KL L D C +T I+GL+K K LE L L N +EG+ L L+ LDL N+
Sbjct: 1019 NLRKLQLIDNC-LTKIEGLSKCKLLEELSLEKNKL--QQIEGVGQLRYLKKLDLGCNRIK 1075
Query: 92 TTLGLANLPNLKTLDLRDCGITTIQGIQ 119
GLA L NL L + D I+ + G++
Sbjct: 1076 RIEGLAQLENLTQLSMEDNEISNLDGLE 1103
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L+ TN+K L L GI+ I+GL K+ NLE + LS N L +++GL NL+ L L+
Sbjct: 49 LSYFTNIKTLTLINQGISEIEGLDKMVNLEQMWLSEN--LIENIKGLDKCKNLRDLFLTA 106
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQG 117
N+ GL NL NL+ L L + I ++
Sbjct: 107 NRIKRVRGLDNLINLEKLWLDENRIENLES 136
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 17 NITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
N+ S + ++ L L NL L L I I+GL + K L+ LDL+ N+ +EGL
Sbjct: 789 NLFSNRVKKIKCLEKLVNLNTLILSFNEIEMIEGLQECKVLKRLDLNHNFI--RKIEGLD 846
Query: 76 NLTNLQVLDLSGN 88
N NLQ L+L+ N
Sbjct: 847 NKVNLQTLNLTNN 859
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL + NL+++ L I I+GL K KNL L L++N + GL NL NL+ L L
Sbjct: 70 GLDKMVNLEQMWLSENLIENIKGLDKCKNLRDLFLTANRI--KRVRGLDNLINLEKLWLD 127
Query: 87 GN--QNLTTLGLANLPNLKTLDL 107
N +NL + G++ L LK L++
Sbjct: 128 ENRIENLES-GMSCLVKLKELNV 149
>gi|158429242|pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L+ L LQ L S+N +T L LANLT L++LD+ ++ I LAKL NLE+L
Sbjct: 147 LSGLTSLQQLSFSSN------QVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESL 200
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGI 118
++N + L LTNL L L+GNQ L +G LA+L NL LDL + I+ + +
Sbjct: 201 IATNNQI--SDITPLGILTNLDELSLNGNQ-LKDIGTLASLTNLTDLDLANNQISNLAPL 257
Query: 119 QQFT 122
T
Sbjct: 258 SGLT 261
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L S
Sbjct: 103 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSFSS 160
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 161 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 195
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 169 LANLTTLERLDISSNK-VSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 223
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 224 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 267
>gi|77455262|gb|ABA86440.1| CG12283 [Drosophila yakuba]
Length = 871
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSNY 65
QVLD+S N + + S + ANL NL+KL L C I I+ L NL LDLS N
Sbjct: 117 QVLDMSGN-KLQTLSNEQFIRANLLNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNL 175
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
+ L ++ +L+ L L+ N + + N P+L LDL C I TI Q F
Sbjct: 176 LVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNTPSLHKLDLSHCDIQTISA-QAF 232
>gi|77455254|gb|ABA86436.1| CG12283 [Drosophila melanogaster]
Length = 864
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSNY 65
QVLD+S N + + S + ANL NL+KL L C I I+ L NL LDLS N
Sbjct: 116 QVLDMSGN-KLQTLSNEQFIRANLLNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNL 174
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
+ L ++ +L+ L L+ N + + N P+L LDL C I TI Q F
Sbjct: 175 LVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNTPSLHKLDLSHCDIQTISA-QAF 231
>gi|290892810|ref|ZP_06555801.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|404407073|ref|YP_006689788.1| hypothetical protein LMOSLCC2376_0590 [Listeria monocytogenes
SLCC2376]
gi|290557622|gb|EFD91145.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|404241222|emb|CBY62622.1| leucine-rich repeat domain protein (LPXTG motif) [Listeria
monocytogenes SLCC2376]
Length = 577
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRLG----LANLTNLKKLDLDGCGIT--TIQGLAKLKNL 56
NL L LD + N + S R+ +A L+NL LDL G ++ T+ L L+ L
Sbjct: 81 NLADLTGLDYAHNLTLLQLSTPRVSDYSIVAKLSNLTSLDLTGYSLSSSTVPDLNGLQKL 140
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLT-TLGLANLPNLKTLDLRDCGITTI 115
L L S ++ L L NL L+L + ++ + L +LPNL TL ++ CG+
Sbjct: 141 TRLTLFSGRIVNSDLAKFNQLPNLTYLNLDRSSSINDVMALKSLPNLATLSIQFCGVNDF 200
Query: 116 QGIQQFTS 123
+GI F S
Sbjct: 201 RGIDTFPS 208
>gi|294461743|gb|ADE76430.1| unknown [Picea sitchensis]
Length = 524
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 60/116 (51%), Gaps = 11/116 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITT--IQGLAKLKNL 56
L+NL LQ + L GSL RL L NLTNL+ + L CG + L L NL
Sbjct: 64 LSNLTNLQSMVLHK-----CGSLERLPESLGNLTNLQSMVLHKCGSLERLPESLGNLTNL 118
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDC 110
+++ L L E L NLTNLQ +DL G ++L L L NL NL+++ L C
Sbjct: 119 QSMVLHKCGSLERLPESLGNLTNLQSMDLDGLKSLERLPESLGNLTNLQSMVLHSC 174
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 10/99 (10%)
Query: 21 GSLTRL--GLANLTNLKKLDLDGCGITTIQGLAK----LKNLEALDLSSNYYLHGSLEGL 74
GSL RL L NLTNL+ +DLDG + +++ L + L NL+++ L S L E L
Sbjct: 127 GSLERLPESLGNLTNLQSMDLDG--LKSLERLPESLGNLTNLQSMVLHSCESLERLPECL 184
Query: 75 ANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCG 111
NLTNLQ + L ++L + L NL NL+++ L CG
Sbjct: 185 GNLTNLQSMKLDYCESLERVPESLGNLTNLQSMVLHACG 223
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 21 GSLTRL--GLANLTNLKKLDLDGCGITT--IQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
GSL RL L NLTNL+ + L CG + L L NL+++DL L E L N
Sbjct: 103 GSLERLPESLGNLTNLQSMVLHKCGSLERLPESLGNLTNLQSMDLDGLKSLERLPESLGN 162
Query: 77 LTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDC 110
LTNLQ + L ++L L L NL NL+++ L C
Sbjct: 163 LTNLQSMVLHSCESLERLPECLGNLTNLQSMKLDYC 198
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 22 SLTRL--GLANLTNLKKLDLDGCGITT--IQGLAKLKNLEALDLSSNYYLHGSLEGLANL 77
SL RL L NLTNL+ + LD C + L+ L NL+++ L L E L NL
Sbjct: 32 SLERLPESLGNLTNLQSMKLDDCRSLERLPESLSNLTNLQSMVLHKCGSLERLPESLGNL 91
Query: 78 TNLQ--VLDLSGNQNLTTLGLANLPNLKTLDLRDCG 111
TNLQ VL G+ L NL NL+++ L CG
Sbjct: 92 TNLQSMVLHKCGSLERLPESLGNLTNLQSMVLHKCG 127
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITT--IQGLAKLKNL 56
L NL LQ +DL SL RL L NLTNL+ + L C + L L NL
Sbjct: 136 LGNLTNLQSMDLDG-----LKSLERLPESLGNLTNLQSMVLHSCESLERLPECLGNLTNL 190
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQ--VLDLSGNQNLTTLGLANLPNLKTLDLR 108
+++ L L E L NLTNLQ VL GN L NL NL+++ L+
Sbjct: 191 QSMKLDYCESLERVPESLGNLTNLQSMVLHACGNLERLPESLGNLMNLQSMKLK 244
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 22 SLTRLG--LANLTNLKKLDLDGCGI--TTIQGLAKLKNLEALDLSSNYYLHGSLEGLANL 77
SL RL L NLTNL+ + LD C + L L NL+++ L + L E L NL
Sbjct: 176 SLERLPECLGNLTNLQSMKLDYCESLERVPESLGNLTNLQSMVLHACGNLERLPESLGNL 235
Query: 78 TNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDC 110
NLQ + L + +LG NL NL+++ L +C
Sbjct: 236 MNLQSMKLKSERLPESLG--NLTNLQSMVLYEC 266
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL LQ + L A G+L RL L NL NL+ + L + + L L NL++
Sbjct: 208 LGNLTNLQSMVLHA-----CGNLERLPESLGNLMNLQSMKLKSERLP--ESLGNLTNLQS 260
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCG 111
+ L + L E L NL NLQ + L ++L L L NL NL+++ L +C
Sbjct: 261 MVLYECWRLERLPESLGNLMNLQSMMLHWCESLERLPESLGNLMNLQSMVLHECS 315
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 26/94 (27%)
Query: 22 SLTRL--GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTN 79
SL RL L NLTNL+ + LD C ++LE L E L NLTN
Sbjct: 8 SLERLPESLGNLTNLQSMKLDHC-----------RSLERLP-----------ESLGNLTN 45
Query: 80 LQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCG 111
LQ + L ++L L L+NL NL+++ L CG
Sbjct: 46 LQSMKLDDCRSLERLPESLSNLTNLQSMVLHKCG 79
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 67/135 (49%), Gaps = 25/135 (18%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITTIQGLAK----LK 54
L NL LQ ++L I L RL L NLTNL+ + L G+ +++ L K L
Sbjct: 348 LGNLTNLQSMEL-----IYCKRLARLPKSLGNLTNLQSMQL--LGLKSLKRLPKSLGNLM 400
Query: 55 NLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL----DLR-- 108
NL ++ L L + L NLTNLQ ++LS + L LP++KTL +LR
Sbjct: 401 NLRSMQLLGLESLERLPKSLGNLTNLQSMELSFLE-----SLERLPSIKTLLSLEELRVL 455
Query: 109 DC-GITTIQGIQQFT 122
DC + +I + Q T
Sbjct: 456 DCVKLKSIPDLAQLT 470
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 22 SLTRL--GLANLTNLKKLDLDGCGI--TTIQGLAKLKNLEALDLSSNYYLHGSLEGLANL 77
SL RL L NL NL+ + L C + + L L NL+++ L +L E L NL
Sbjct: 292 SLERLPESLGNLMNLQSMVLHECSKLESLPESLGNLTNLQSMVLHECDHLERLPESLGNL 351
Query: 78 TNLQVLDLSGNQNLTTL--GLANLPNLKTLDL 107
TNLQ ++L + L L L NL NL+++ L
Sbjct: 352 TNLQSMELIYCKRLARLPKSLGNLTNLQSMQL 383
>gi|432916121|ref|XP_004079302.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like [Oryzias
latipes]
Length = 346
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 18 ITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
I S +T++ GL NL NLK+L L GI I+GL K L LD+++N +E +++
Sbjct: 223 IQSNRITKIEGLQNLVNLKELYLSHNGIEVIEGLENNKKLTTLDIAANRV--KKIENISH 280
Query: 77 LTNLQVLDLSGNQNLTTLGLANLPNLKTLD 106
LT LQ ++ NQ L L N K+L+
Sbjct: 281 LTELQEFWMNDNQIENWSDLDELKNAKSLE 310
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 66/140 (47%), Gaps = 27/140 (19%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L NL L+ LD+S +NI L ++ L LT LKKL L IT I L LE L
Sbjct: 124 LDNLTELEQLDVS--FNI----LRKIENLERLTQLKKLFLVHNKITGIANLEHFSFLEML 177
Query: 60 DLSSNY-YLHGSLEGLANLT-------------------NLQVLDLSGNQNLTTLGLANL 99
+L SN + +L+GL +LT NL VL + N+ GL NL
Sbjct: 178 ELGSNRIRVIENLDGLTSLTSLFLGTNKINKLQNLDALHNLSVLSIQSNRITKIEGLQNL 237
Query: 100 PNLKTLDLRDCGITTIQGIQ 119
NLK L L GI I+G++
Sbjct: 238 VNLKELYLSHNGIEVIEGLE 257
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 11/125 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L + +L++L+L +N R+ L LT+L L L I +Q L L NL
Sbjct: 168 LEHFSFLEMLELGSNR-------IRVIENLDGLTSLTSLFLGTNKINKLQNLDALHNLSV 220
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L + SN +EGL NL NL+ L LS N GL N L TLD+ + I+ I
Sbjct: 221 LSIQSNRI--TKIEGLQNLVNLKELYLSHNGIEVIEGLENNKKLTTLDIAANRVKKIENI 278
Query: 119 QQFTS 123
T
Sbjct: 279 SHLTE 283
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L K L L I I+ L L +L LDL N LE L NLT L+ LD+S
Sbjct: 79 GLEVLQKAKTLSLRQNLIKKIENLESLSSLRELDLYDNQI--RKLENLDNLTELEQLDVS 136
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N L L LK L L IT I ++ F+
Sbjct: 137 FNILRKIENLERLTQLKKLFLVHNKITGIANLEHFS 172
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 37 LDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGL 96
+DL C I I+GL L+ + L L N L +E L +L++L+ LDL NQ L
Sbjct: 67 VDLVHCRIGKIEGLEVLQKAKTLSLRQN--LIKKIENLESLSSLRELDLYDNQIRKLENL 124
Query: 97 ANLPNLKTLDLRDCGITTIQGIQQFT 122
NL L+ LD+ + I+ +++ T
Sbjct: 125 DNLTELEQLDVSFNILRKIENLERLT 150
>gi|77455256|gb|ABA86437.1| CG12283 [Drosophila simulans]
Length = 864
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSNY 65
QVLD+S N + + S + ANL NL+KL L C I I+ L NL LDLS N
Sbjct: 116 QVLDMSGN-KLQTLSNEQFIRANLLNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNL 174
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
+ L ++ +L+ L L+ N + + N P+L LDL C I TI Q F
Sbjct: 175 LVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNTPSLHKLDLSHCDIQTISA-QAF 231
>gi|357451971|ref|XP_003596262.1| Receptor-like serine/threonine kinase [Medicago truncatula]
gi|355485310|gb|AES66513.1| Receptor-like serine/threonine kinase [Medicago truncatula]
Length = 1011
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 60/123 (48%), Gaps = 18/123 (14%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNLEA 58
L NL+ LQ L LSAN N T G++ NL NL +DG ++ + LE
Sbjct: 184 LGNLKNLQKLMLSAN-NFT-GTIPE-AFGNLKNLTNFRIDGSSLSGKIPSFIGNWTKLER 240
Query: 59 LDLSSNYYLHGSLEG--------LANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDC 110
LDL SLEG L NL L++ DL GN +T L +L ++ L+LR+C
Sbjct: 241 LDLQGT-----SLEGPIPPAVSVLKNLKELRISDLKGNTTMTFPDLKDLKRMQRLELRNC 295
Query: 111 GIT 113
IT
Sbjct: 296 LIT 298
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNLEA 58
L NL+ L++ DL N ++T L +L +++L+L C IT + +L+NL+
Sbjct: 259 LKNLKELRISDLKGNT-----TMTFPDLKDLKRMQRLELRNCLITGPIPDYIGELENLKT 313
Query: 59 LDLSSNY---YLHGSLEGLANL 77
+DLSSN + GSLE L ++
Sbjct: 314 IDLSSNRLTGPIPGSLEDLESI 335
>gi|90079307|dbj|BAE89333.1| unnamed protein product [Macaca fascicularis]
Length = 375
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 1 LANLRYLQVLDLSAN--YNITS-GSLTRL--------------GLANLTNLKKLDLDGCG 43
L L L++LD+S N NI LTRL L+NL L+ L+L
Sbjct: 153 LEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNR 212
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
I I+ + L NLE+L L N L+ L LTNL VL + N+ GL NL NL+
Sbjct: 213 IRAIENIDTLTNLESLFLGKNKI--TKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLR 270
Query: 104 TLDLRDCGITTIQGIQ 119
L L GI I+G++
Sbjct: 271 ELYLSHNGIEVIEGLE 286
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL LQ+L+L +N I + + LTNL+ L L IT +Q L L NL L
Sbjct: 197 LSNLHQLQMLELGSNR-IRAIE----NIDTLTNLESLFLGKNKITKLQNLDALTNLTVLS 251
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ SN +EGL NL NL+ L LS N GL N L LD+ I I+ I
Sbjct: 252 MQSNRL--TKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISH 309
Query: 121 FTS 123
T
Sbjct: 310 LTE 312
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 7 LQVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
LQ LD N + S RL GL NL NL++L L GI I+GL L LD++
Sbjct: 238 LQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIA 297
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGN 88
SN +E +++LT LQ ++ N
Sbjct: 298 SNRI--KKIENISHLTELQEFWMNDN 321
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 37 LDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGL 96
+DL+ C I I+G LK ++ L L N L +E L L +L+ LDL NQ L
Sbjct: 96 VDLNHCRIGKIEGFEVLKKVKTLCLRQN--LIKCIENLEELQSLRELDLYDNQIKKIENL 153
Query: 97 ANLPNLKTLDLRDCGITTIQGIQQFT 122
L L+ LD+ + I+G+ + T
Sbjct: 154 EALTELEILDISFNLLRNIEGVDKLT 179
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LT L+ LD+ + I+G+ KL L+ L L +N +E L+NL LQ+L+L
Sbjct: 153 LEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKI--SKIENLSNLHQLQMLELGS 210
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ + L NL++L L IT +Q + T
Sbjct: 211 NRIRAIENIDTLTNLESLFLGKNKITKLQNLDALT 245
>gi|443906745|gb|AGD79318.1| GM02380p1 [Drosophila melanogaster]
Length = 880
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSNY 65
QVLD+S N + + S + ANL NL+KL L C I I+ L NL LDLS N
Sbjct: 124 QVLDMSGN-KLQTLSNEQFIRANLLNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNL 182
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTI 115
+ L ++ +L+ L L+ N + + N P+L LDL C I TI
Sbjct: 183 LVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNTPSLHKLDLSHCDIQTI 234
>gi|77455258|gb|ABA86438.1| CG12283 [Drosophila simulans]
Length = 864
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSNY 65
QVLD+S N + + S + ANL NL+KL L C I I+ L NL LDLS N
Sbjct: 116 QVLDMSGN-KLQTLSNEQFIRANLLNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNL 174
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
+ L ++ +L+ L L+ N + + N P+L LDL C I TI Q F
Sbjct: 175 LVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNTPSLHKLDLSHCDIQTISA-QAF 231
>gi|410971087|ref|XP_003992005.1| PREDICTED: leucine-rich repeat-containing protein 31 [Felis catus]
Length = 566
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 61/122 (50%), Gaps = 27/122 (22%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L ++ L+VLDLS N NI GSL + GL + +NLK L L CG++ K++
Sbjct: 228 LPMMQNLEVLDLSINRNI-GGSLNSIAQGLKSTSNLKVLKLHSCGLSQ-------KSVRI 279
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL------TTLGLANLPNLKTLDLRDCGI 112
LD + Y L L+ LDLS N+ L ++ LA L +L+ LDL C +
Sbjct: 280 LDAAFRY-----------LCELRRLDLSCNKELGGGFEDSSAQLATLEHLEVLDLHQCSL 328
Query: 113 TT 114
T
Sbjct: 329 TV 330
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 57/123 (46%), Gaps = 28/123 (22%)
Query: 2 ANLRYL---QVLDLSANYNITSG-SLTRLGLANLTNLKKLDLDGCGITT------IQGLA 51
A RYL + LDLS N + G + LA L +L+ LDL C +T Q +
Sbjct: 282 AAFRYLCELRRLDLSCNKELGGGFEDSSAQLATLEHLEVLDLHQCSLTVDDVMSLTQVIP 341
Query: 52 KLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCG 111
L +L+ LDLS+N + GS E L L+ L+ LP LK+L + +C
Sbjct: 342 LLSSLQELDLSANKKMGGSSENL--LSRLRF----------------LPALKSLLINNCA 383
Query: 112 ITT 114
+ +
Sbjct: 384 LQS 386
>gi|158429244|pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L+ L LQ L S+N +T L LANLT L++LD+ ++ I LAKL NLE+L
Sbjct: 147 LSGLTSLQQLSFSSNQ------VTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESL 200
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-LANLPNLKTLDLRDCGITTIQGI 118
++N + L LTNL L L+GNQ L +G LA+L NL LDL + I+ + +
Sbjct: 201 IATNNQI--SDITPLGILTNLDELSLNGNQ-LKDIGTLASLTNLTDLDLANNQISNLAPL 257
Query: 119 QQFT 122
T
Sbjct: 258 SGLT 261
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L S
Sbjct: 103 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSFSS 160
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 161 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 195
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 169 LANLTTLERLDISSNK-VSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 223
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 224 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 267
>gi|147787802|emb|CAN71755.1| hypothetical protein VITISV_005047 [Vitis vinifera]
Length = 1517
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 26 LGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
L L LTNL+ L LDGC + I +AKLK LE L L + E +A LT+L++LDL
Sbjct: 526 LSLQCLTNLRTLCLDGCKVGDIVIIAKLKKLEILSLMDSDMEQLPRE-IAQLTHLRMLDL 584
Query: 86 SGNQNLTTL------GLANLPNL 102
SG+ L + L+ L NL
Sbjct: 585 SGSSKLKVIPSDVISSLSQLENL 607
>gi|410451706|ref|ZP_11305708.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
gi|410014472|gb|EKO76602.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
Length = 515
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 28 LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+ NL LK L L+ +TTI + + L+NL+ L+LSSN L + + NL NLQVLDL+
Sbjct: 361 IGNLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQ-LTTIPKEIENLQNLQVLDLN 419
Query: 87 GNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
NQ LT L + NL NLK LDL +TT+
Sbjct: 420 NNQ-LTALPKEIGNLQNLKELDLTSNRLTTL 449
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 28 LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+ L NL+ LDL + T+ + + KL+ L+ L+L+ N L E + L NLQ LDL
Sbjct: 131 IGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNR-LANLPEEIGKLQNLQELDLE 189
Query: 87 GNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
GNQ L TL + NL NL+TLDL +TT+
Sbjct: 190 GNQ-LATLPEEIGNLQNLQTLDLEGNQLTTL 219
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 64/118 (54%), Gaps = 9/118 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ L+ LDLS+N +T + L L+KL+L + + + + KL+NL+ L
Sbjct: 131 IGKLQNLRDLDLSSNQLMTLPK----EIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQEL 186
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
DL N L E + NL NLQ LDL GNQ LTTL + L NLK L L + +TT
Sbjct: 187 DLEGNQ-LATLPEEIGNLQNLQTLDLEGNQ-LTTLPKEIGKLQNLKKLYLYNNRLTTF 242
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 13/97 (13%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTI-QGLAKLKNLE 57
+ NL+ LQVLDL+ N LT L + NL NLK+LDL +TT+ + + L++LE
Sbjct: 407 IENLQNLQVLDLNNN------QLTALPKEIGNLQNLKELDLTSNRLTTLPKEIGNLQSLE 460
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL 94
+LDLS+N L E + L +L+ L L +N+ TL
Sbjct: 461 SLDLSNN-PLTSFPEEIGKLQHLKRLRL---ENIPTL 493
>gi|224120450|ref|XP_002331051.1| predicted protein [Populus trichocarpa]
gi|222872981|gb|EEF10112.1| predicted protein [Populus trichocarpa]
Length = 935
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 57/93 (61%), Gaps = 9/93 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC----GITTIQGLAKLKNL 56
LA+L+ L+ LDLS + + + L +G +T LK L L GC I QGL +LK+L
Sbjct: 329 LASLKNLEKLDLSFS-TVDNSFLQTVG--KITTLKSLRLRGCRLNGSIPKAQGLCQLKHL 385
Query: 57 EALDLSSNYYLHGSLEG-LANLTNLQVLDLSGN 88
+ LD+S N L G+L LANLT+LQ LDLS N
Sbjct: 386 QNLDISGND-LSGALPRCLANLTSLQGLDLSYN 417
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 52/114 (45%), Gaps = 34/114 (29%)
Query: 28 LANLTNLKKLDLD------GCGITTIQGLAKLKNLEALDLS----SNYYLH--------- 68
L NL+ L+LD G T + LA LKNLE LDLS N +L
Sbjct: 301 LTKFPNLRTLNLDENNLEGSFGTTLDKDLASLKNLEKLDLSFSTVDNSFLQTVGKITTLK 360
Query: 69 ----------GSL---EGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDL 107
GS+ +GL L +LQ LD+SGN L LANL +L+ LDL
Sbjct: 361 SLRLRGCRLNGSIPKAQGLCQLKHLQNLDISGNDLSGALPRCLANLTSLQGLDL 414
>gi|147788249|emb|CAN64835.1| hypothetical protein VITISV_020599 [Vitis vinifera]
Length = 324
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 25 RLGLANLTNLK---KLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQ 81
R+ + NL LK K+ L +T+++G LE L LS N +EGL+ L NL+
Sbjct: 182 RIRVVNLCGLKCIEKISLQSNRLTSMKGFEDCVALEELYLSHNGI--AKMEGLSTLVNLR 239
Query: 82 VLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
VLD S N+ + NL L+ L L D IT+++GI +
Sbjct: 240 VLDASSNKLTAVDDIXNLTQLEDLWLNDNQITSLEGIAE 278
>gi|4633069|gb|AAD26613.1| protein phosphatase-1 regulatory subunit 7 beta2 [Homo sapiens]
Length = 237
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 1 LANLRYLQVLDLSAN--YNITS-GSLTRL--------------GLANLTNLKKLDLDGCG 43
L L L++LD+S N NI LTRL L+NL L+ L+L
Sbjct: 95 LEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNR 154
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
I I+ + L NLE+L L N L+ L LTNL VL + N+ GL NL NL+
Sbjct: 155 IRAIENIDTLTNLESLFLGKNKI--TKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLR 212
Query: 104 TLDLRDCGITTIQGIQ 119
L L GI I+G++
Sbjct: 213 ELYLSHNGIEVIEGLE 228
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL LQ+L+L +N I + + LTNL+ L L IT +Q L L NL L
Sbjct: 139 LSNLHQLQMLELGSNR-IRAIE----NIDTLTNLESLFLGKNKITKLQNLDALTNLTVLS 193
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLAN 98
+ SN +EGL NL NL+ L LS N GL N
Sbjct: 194 MQSNRL--TKIEGLQNLVNLRELYLSHNGIEVIEGLEN 229
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LT L+ LD+ + I+G+ KL L+ L L +N +E L+NL LQ+L+L
Sbjct: 95 LEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKI--SKIENLSNLHQLQMLELGS 152
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ + L NL++L L IT +Q + T+
Sbjct: 153 NRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTN 188
>gi|77455260|gb|ABA86439.1| CG12283 [Drosophila yakuba]
Length = 871
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSNY 65
QVLD+S N + + S + ANL NL+KL L C I I+ L NL LDLS N
Sbjct: 117 QVLDMSGN-KLQTLSNEQFIRANLLNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNL 175
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
+ L ++ +L+ L L+ N + + N P+L LDL C I TI Q F
Sbjct: 176 LVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNTPSLHKLDLSHCDIQTISA-QAF 232
>gi|296414818|ref|XP_002837094.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295632944|emb|CAZ81285.1| unnamed protein product [Tuber melanosporum]
Length = 359
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L+ L NL+ L + +T+I GL +L +LE L +S N S+ GL NL+VLD+S
Sbjct: 222 LSTLKNLRILSIQSNRLTSITGLDELTSLEELYISHNAL--TSIAGLDTNKNLRVLDISN 279
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
NQ LA+LP+L+ L + + + + I+Q
Sbjct: 280 NQIAQLANLAHLPHLEELWASNNKLASFEEIEQ 312
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 37 LDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGL 96
LDL I I GL L NLE LDLS N H ++ +++L LQ L N+ GL
Sbjct: 121 LDLYDNHIAHIHGLEDLANLENLDLSFNNLKH--IKRISHLAKLQNLYFVQNRISRIEGL 178
Query: 97 ANLPNLKTLDLRDCGITTIQGIQQFTS 123
L L+ L+L I I+ I T+
Sbjct: 179 EGLAVLRNLELGANRIREIENIGHLTA 205
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 20/117 (17%)
Query: 27 GLANLTNLKKLDLDG---CGITTIQGLAKLKN-------------LEALDLSSNYYLHG- 69
GL +L NL+ LDL I I LAKL+N LE L + N L
Sbjct: 133 GLEDLANLENLDLSFNNLKHIKRISHLAKLQNLYFVQNRISRIEGLEGLAVLRNLELGAN 192
Query: 70 ---SLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
+E + +LT LQ L L N+ L+ L NL+ L ++ +T+I G+ + TS
Sbjct: 193 RIREIENIGHLTALQELWLGKNKITELKNLSTLKNLRILSIQSNRLTSITGLDELTS 249
>gi|255525367|ref|ZP_05392306.1| putative cell wall binding repeat 2-containing protein [Clostridium
carboxidivorans P7]
gi|296187977|ref|ZP_06856369.1| leucine Rich repeat protein [Clostridium carboxidivorans P7]
gi|255510938|gb|EET87239.1| putative cell wall binding repeat 2-containing protein [Clostridium
carboxidivorans P7]
gi|296047103|gb|EFG86545.1| leucine Rich repeat protein [Clostridium carboxidivorans P7]
Length = 660
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L NL LQ+L L T ++ L L NLTNL+KL+L ++ I L L NL+ L
Sbjct: 379 LENLTNLQILAL------TDTEVSDLSPLKNLTNLQKLNLRCAQVSDISPLKYLTNLQNL 432
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
+L + L +LTNLQ LDL Q T L NL NL+ L L+ ++ I G++
Sbjct: 433 NLWCAQV--SDISPLKDLTNLQKLDLHIPQISDTSALKNLTNLQQLSLQYTQVSHINGLE 490
Query: 120 QFT 122
T
Sbjct: 491 NLT 493
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL NLTNL++L+LD ++ I GL L NL+ L+L++N ++ L LTNLQ LDLS
Sbjct: 488 GLENLTNLQQLNLDRTQVSDISGLKDLTNLQKLNLNNNQV--SNISPLKYLTNLQELDLS 545
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L L NL+ LDL + ++ + ++ T
Sbjct: 546 SNQVSDISPLKYLTNLQKLDLNNNQVSDVSPLKYLT 581
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 1 LANLRYL---QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLE 57
++ L+YL Q LDLS+N ++ S L LTNL+KLDL+ ++ + L L NL+
Sbjct: 530 ISPLKYLTNLQELDLSSN-QVSDIS----PLKYLTNLQKLDLNNNQVSDVSPLKYLTNLQ 584
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
L L+ N + L +L NLQ L L NQ L L NL+ L+L+ ++
Sbjct: 585 DLLLNVNQI--SDISPLKDLINLQGLYLGINQISDISPLKYLINLRELNLKHTQVS 638
>gi|32880137|gb|AAP88899.1| protein phosphatase 1, regulatory subunit 7 [synthetic construct]
Length = 281
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 1 LANLRYLQVLDLSAN--YNITS-GSLTRL--------------GLANLTNLKKLDLDGCG 43
L L L++LD+S N NI LTRL L+NL L+ L+L
Sbjct: 138 LEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNR 197
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
I I+ + L NLE+L L N L+ L LTNL VL + N+ GL NL NL+
Sbjct: 198 IRAIENIDTLTNLESLFLGKNKI--TKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLR 255
Query: 104 TLDLRDCGITTIQGIQ 119
L L GI I+G++
Sbjct: 256 ELYLSHNGIEVIEGLE 271
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL LQ+L+L +N I + + LTNL+ L L IT +Q L L NL L
Sbjct: 182 LSNLHQLQMLELGSNR-IRAIE----NIDTLTNLESLFLGKNKITKLQNLDALTNLTVLS 236
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLAN 98
+ SN +EGL NL NL+ L LS N GL N
Sbjct: 237 MQSNRL--TKIEGLQNLVNLRELYLSHNGIEVIEGLEN 272
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LT L+ LD+ + I+G+ KL L+ L L +N +E L+NL LQ+L+L
Sbjct: 138 LEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKI--SKIENLSNLHQLQMLELGS 195
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ + L NL++L L IT +Q + T+
Sbjct: 196 NRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTN 231
>gi|308163273|gb|EFO65623.1| Hypothetical protein GLP15_3337 [Giardia lamblia P15]
Length = 1505
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
A +T L+ L LD IT + GL+ L LE L L N+ SL L + T+L+ L+++ N
Sbjct: 91 AKVTGLRFLWLDDNRITHVAGLSTLPRLEYLSLPDNHLTDKSLSELKS-TSLRGLNVANN 149
Query: 89 QNLTTLGLANLPNLKTLDLRDCGIT 113
T LANLPNL LD+ I+
Sbjct: 150 PVFYTTWLANLPNLVHLDISRTNIS 174
>gi|46446627|ref|YP_007992.1| hypothetical protein pc0993 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400268|emb|CAF23717.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 478
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L+ LQ LDLS N+T L L L L+ LDL C T GLA L L AL
Sbjct: 346 LTPLKALQYLDLSYWDNLTDDGLAHLR--PLVALQHLDLANCYELTDAGLAHLTPLVALT 403
Query: 61 LSSNYYLH----GSLEGLANLTNLQVLDLSGNQNLTTLGLANL-P--NLKTLDLRDCGIT 113
+ H L L L L+ L+LS +NLT GLA+L P L+ L+L DC
Sbjct: 404 HLKLIWCHKLTDAGLAHLRPLVALKHLNLSSCRNLTDAGLAHLIPLTALQYLNLSDCRKL 463
Query: 114 TIQGIQQFTS 123
T G+ F +
Sbjct: 464 TDTGLASFKA 473
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 56/126 (44%), Gaps = 26/126 (20%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L +LR LQ LDLS NIT L L LT L++L L C T GLA L L+AL
Sbjct: 296 LTSLRALQYLDLSFCRNITDAGLAHL--TPLTALQRLLLKKCENLTGAGLAHLTPLKAL- 352
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQG 117
Q LDLS NLT GLA+L L+ LDL +C T G
Sbjct: 353 --------------------QYLDLSYWDNLTDDGLAHLRPLVALQHLDLANCYELTDAG 392
Query: 118 IQQFTS 123
+ T
Sbjct: 393 LAHLTP 398
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEA---LDLS-SNYYLHGSLEGLANLTNLQVL 83
LA+LT L+ L L GC T GLA L +L A LDLS L L LT LQ L
Sbjct: 271 LASLTALQHLGLRGCDKVTDAGLAHLTSLRALQYLDLSFCRNITDAGLAHLTPLTALQRL 330
Query: 84 DLSGNQNLTTLGLANLPNLKTLDLRD 109
L +NLT GLA+L LK L D
Sbjct: 331 LLKKCENLTGAGLAHLTPLKALQYLD 356
>gi|329905907|ref|ZP_08274287.1| hypothetical protein IMCC9480_2692 [Oxalobacteraceae bacterium
IMCC9480]
gi|327547418|gb|EGF32242.1| hypothetical protein IMCC9480_2692 [Oxalobacteraceae bacterium
IMCC9480]
Length = 552
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
Query: 2 ANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD- 60
A +R+L L+LS N +T L LA LT LK+LDL C GLA L N+ +L
Sbjct: 33 AVIRHLTNLNLSNNSKLTDAGLA--SLAPLTALKQLDLGHCTGIGDTGLAHLGNMASLTQ 90
Query: 61 ---LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK--TLDLRDCGITTI 115
LE LANL L L+L+G +T G+A+L L LDL C +
Sbjct: 91 LNVRQCTNITDAGLEQLANLPRLARLNLAGCHRITAAGIAHLKKLPLTYLDLSGCSGISN 150
Query: 116 QGIQQFTSY 124
I ++
Sbjct: 151 AAIAHLKAH 159
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 66/155 (42%), Gaps = 39/155 (25%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNL---- 56
LA + L+ L+LS ++T +L L A L L+ L L+ C TT GLA+L +L
Sbjct: 277 LAEMTSLRYLNLSGGADMTDAALAHL--AELPALQHLILNNCRRTTDAGLAQLSHLPLET 334
Query: 57 ------------------------EALDLSSNYYLH-GSLEGLANLTNLQVLDLSGNQNL 91
+ LDLS L L LA++T L+ LDLS N+N
Sbjct: 335 LELVDCVALTNTALARLPGAAATLQKLDLSGCTALSDAGLAHLADITTLRKLDLSWNRNF 394
Query: 92 TTLGLANLPNLKTLDLR--------DCGITTIQGI 118
T G L L LR D G+T + G+
Sbjct: 395 TDAGAVALRELPLGQLRLNGWIGLTDQGMTALSGM 429
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 58/138 (42%), Gaps = 30/138 (21%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLE--A 58
L N+ L L++ NIT L +L ANL L +L+L GC T G+A LK L
Sbjct: 82 LGNMASLTQLNVRQCTNITDAGLEQL--ANLPRLARLNLAGCHRITAAGIAHLKKLPLTY 139
Query: 59 LDLSSNYYLHGSL----------------------EGLANLTN--LQVLDLSGNQNLTTL 94
LDLS + + EG A+L LQ LDLSG T
Sbjct: 140 LDLSGCSGISNAAIAHLKAHQLTELNLSDCTGFGDEGFAHLAEVPLQTLDLSGCTGFTNS 199
Query: 95 GLA--NLPNLKTLDLRDC 110
GL N L L LR+C
Sbjct: 200 GLRFLNKSTLTRLSLRNC 217
>gi|145524884|ref|XP_001448264.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415808|emb|CAK80867.1| unnamed protein product [Paramecium tetraurelia]
Length = 1334
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 10 LDLSANYNITSGSLTRLGLAN-LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH 68
LD +T R+ + NLK L L GIT I+GL +L LE L+L+ N
Sbjct: 31 LDRIERIELTLEDFGRMNVVQAFKNLKSLTLINVGITVIEGLDELTKLEELNLNENQI-- 88
Query: 69 GSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
L GL + N++ + +S N GL NL L+TL L D I IQ ++
Sbjct: 89 TKLSGLKGIVNVKSIYISHNAIQKIEGLENLTKLETLWLCDNKIDAIQNLE 139
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 18 ITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY--YLHGSLEGL 74
I+ ++ ++ GL NLT L+ L L I IQ L L N+ L LS+N YL SL+ L
Sbjct: 105 ISHNAIQKIEGLENLTKLETLWLCDNKIDAIQNLENLVNMRQLWLSANQISYLRTSLDRL 164
Query: 75 ANLTNLQVLDLSGNQNLT---TLGLANLPNLKTLDLRD 109
NL + L++SGN+ + L L LPNLK L D
Sbjct: 165 KNLHD---LNISGNKICSFKEALNLNRLPNLKVLAFYD 199
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 56/136 (41%), Gaps = 33/136 (24%)
Query: 17 NITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH------- 68
N+ S+ ++ L N+ LKKL+L G I+ I+G++ L NL L L N LH
Sbjct: 904 NLEKNSIIQIQELDNMQYLKKLELGGNRISIIEGISNLINLMQLSLEDNAILHLREFPDL 963
Query: 69 ----------------GSLEGLANLTNLQVLDLSGNQ-----NLTTLGLANLPNLKTLDL 107
+ + +L L +LDLSGN N L +P LK LD
Sbjct: 964 KSLMEIYLGNNNITNQKEINNIKHLQKLIILDLSGNPFARDTNYRAYVLYIIPKLKVLD- 1022
Query: 108 RDCGITTIQGIQQFTS 123
GI+ QQ
Sbjct: 1023 ---GISIEASEQQMAK 1035
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17 NITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
N+ +T+L GL + N+K + + I I+GL L LE L L N +++ L
Sbjct: 82 NLNENQITKLSGLKGIVNVKSIYISHNAIQKIEGLENLTKLETLWLCDNKI--DAIQNLE 139
Query: 76 NLTNLQVLDLSGNQ 89
NL N++ L LS NQ
Sbjct: 140 NLVNMRQLWLSANQ 153
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 18 ITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
IT L+ + GL L L+ L+L IT I + LE L+L N + ++ L N
Sbjct: 861 ITHQKLSSMKGLEGLVQLRHLNLGHNKITQITSIQDSVLLEELNLEKNSIIQ--IQELDN 918
Query: 77 LTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGI 112
+ L+ L+L GN+ G++NL NL L L D I
Sbjct: 919 MQYLKKLELGGNRISIIEGISNLINLMQLSLEDNAI 954
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 34 LKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT 93
L++L+L+ I IQ L ++ L+ L+L N +EG++NL NL L L N
Sbjct: 900 LEELNLEKNSIIQIQELDNMQYLKKLELGGNRI--SIIEGISNLINLMQLSLEDN---AI 954
Query: 94 LGLANLPNLKTL 105
L L P+LK+L
Sbjct: 955 LHLREFPDLKSL 966
>gi|145228987|ref|XP_001388802.1| phosphatase 1 regulatory subunit SDS22 [Aspergillus niger CBS
513.88]
gi|134054898|emb|CAK36910.1| unnamed protein product [Aspergillus niger]
Length = 344
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G+ T+L+ L+L I I+ L LK LE L L N L+ L L+NL++L +
Sbjct: 161 GVETFTSLRNLELGANRIREIENLDNLKALEELWLGKNKI--TELKNLDGLSNLRILSIQ 218
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ GLANL NL+ L + IT + G+++ TS
Sbjct: 219 SNRLTKISGLANLKNLEELYVSHNAITDLSGLEENTS 255
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L NL+ L+ L L N +T L L L+NL+ L + +T I GLA LKNLE L
Sbjct: 184 LDNLKALEELWLGKN------KITELKNLDGLSNLRILSIQSNRLTKISGLANLKNLEEL 237
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
+S N L GL T+L+VLD S NQ L++L NL+ L
Sbjct: 238 YVSHNAI--TDLSGLEENTSLRVLDFSNNQVSKLEHLSHLKNLEEL 281
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 12/90 (13%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L+NLR L +I S LT++ GLANL NL++L + IT + GL + +L L
Sbjct: 209 LSNLRIL---------SIQSNRLTKISGLANLKNLEELYVSHNAITDLSGLEENTSLRVL 259
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
D S+N LE L++L NL+ L S NQ
Sbjct: 260 DFSNNQV--SKLEHLSHLKNLEELWASNNQ 287
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 22 SLTRLGLANLTNLKKLDLDGCGITTIQGLAKL-KNLEALDLSSNYYLHGSLEGLANLTNL 80
S+ L L +K+L I+ I+ ++ K+L LDL N H ++GL NL
Sbjct: 67 SIPALRLERFPKVKRLCFRQNQISRIEFPTEVAKSLTELDLYDNLISH--VKGLDEFENL 124
Query: 81 QVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
LDLS N+ +++L L L I+ I+G++ FTS
Sbjct: 125 TSLDLSFNKIKHVKNISHLVKLTDLYFVQNKISKIEGVETFTS 167
>gi|434386116|ref|YP_007096727.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
PCC 6605]
gi|428017106|gb|AFY93200.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
PCC 6605]
Length = 365
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
LANLTN++ L+L + I+ LAKL L + L +L+ LANLTNL L L
Sbjct: 155 PLANLTNIEFLNLSKSKVVNIEPLAKLTKLRIIFLEQTGV--ENLQPLANLTNLSSLYLK 212
Query: 87 GNQ--NLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ NLT GL NL NLK L L + I IQ + T
Sbjct: 213 KNKIGNLT--GLNNLTNLKELYLSENRIDNIQPLANLT 248
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 7/122 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+A+ LQ +DLS S + LA L NL+ + + ++ +Q LAKL L+
Sbjct: 90 IADFVNLQSIDLSE-----SAVVDLQPLAELVNLQSISISRTSVSDLQPLAKLTKLK--Q 142
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+S+ +++ LANLTN++ L+LS ++ + LA L L+ + L G+ +Q +
Sbjct: 143 VSAAETPLSNIQPLANLTNIEFLNLSKSKVVNIEPLAKLTKLRIIFLEQTGVENLQPLAN 202
Query: 121 FT 122
T
Sbjct: 203 LT 204
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 67/138 (48%), Gaps = 25/138 (18%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L L L N G+LT GL NLTNLK+L L I IQ LA L NL+ L
Sbjct: 200 LANLTNLSSLYLKKN---KIGNLT--GLNNLTNLKELYLSENRIDNIQPLANLTNLQLLW 254
Query: 61 LSSNY--------------YL------HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLP 100
L SN +L +LE L +L NL+ L LS N+ L+ L
Sbjct: 255 LDSNQIDDLLPLTNLKKINFLILDKNKISNLEPLVDLNNLETLYLSNNKISNVKPLSKLV 314
Query: 101 NLKTLDLRDCGITTIQGI 118
NLKTL +R+ I+ I +
Sbjct: 315 NLKTLLIRNNQISDISSL 332
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 13/110 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLD---LDGCGITTIQGLAKLKNLE 57
LANL LQ+L L +N L LTNLKK++ LD I+ ++ L L NLE
Sbjct: 244 LANLTNLQLLWLDSNQ--------IDDLLPLTNLKKINFLILDKNKISNLEPLVDLNNLE 295
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL 107
L LS+N +++ L+ L NL+ L + NQ L NLP L+ ++L
Sbjct: 296 TLYLSNNKI--SNVKPLSKLVNLKTLLIRNNQISDISSLVNLPKLEGIEL 343
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
L L +LDL I I+ +A NL+++DLS + + L+ LA L NLQ + +S
Sbjct: 71 LLKLTQLDLVDREIKNIEPIADFVNLQSIDLSESAVVD--LQPLAELVNLQSISISRTSV 128
Query: 91 LTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
LA L LK + + ++ IQ + T
Sbjct: 129 SDLQPLAKLTKLKQVSAAETPLSNIQPLANLT 160
>gi|110741819|dbj|BAE98852.1| putative disease resistance protein [Arabidopsis thaliana]
Length = 703
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG--ITTIQGLAKLKNLEA 58
+ NL L+ LDLS ++ L + NL NLK L+L C + + L NL+
Sbjct: 279 IGNLINLKKLDLSGCSSLVE---LPLSIGNLINLKTLNLSECSSLVELPSSIGNLINLQE 335
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLA--NLPNLKTLDLRDCG 111
L LS L + NL NL+ LDLSG +L L L+ NL NLKTL+L C
Sbjct: 336 LYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLKTLNLSGCS 390
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG--ITTIQGLAKLKNLEA 58
+ NL L+ LDLS ++ L + NL NLK L+L GC + + L NL+
Sbjct: 351 IGNLINLKKLDLSGCSSLVE---LPLSIGNLINLKTLNLSGCSSLVELPSSIGNL-NLKK 406
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLA--NLPNLKTLDLRDCG 111
LDLS L + NL NL+ LDLSG +L L L+ NL NL+ L L +C
Sbjct: 407 LDLSGCSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECS 461
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 27 GLANLTNLKKLDLDGCG--ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLD 84
+ NL NLK L+L C + + L NL+ L LS L + NL NL+ LD
Sbjct: 230 SIGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLD 289
Query: 85 LSGNQNLTTLGLA--NLPNLKTLDLRDCG 111
LSG +L L L+ NL NLKTL+L +C
Sbjct: 290 LSGCSSLVELPLSIGNLINLKTLNLSECS 318
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 27 GLANLTNLKKLDLDGCG--ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLD 84
+ NL NLKKLDL GC + + L NL+ L LS L + NL NL+ L+
Sbjct: 182 SIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLKTLN 241
Query: 85 LSGNQNLTTL--GLANLPNLKTLDLRDCG 111
LS +L L + NL NL+ L L +C
Sbjct: 242 LSECSSLVELPSSIGNLINLQELYLSECS 270
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 27 GLANLTNLKKLDLDGCG-----ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQ 81
+ N TN+K LD+ GC ++I L L L+ + SS L S + NL NL
Sbjct: 38 SIGNATNIKSLDIQGCSSLLKLPSSIGNLITLPRLDLMGCSSLVELPSS---IGNLINLP 94
Query: 82 VLDLSGNQNLTTL--GLANLPNLKTLDLRDCG 111
LDL G +L L + NL NL+ C
Sbjct: 95 RLDLMGCSSLVELPSSIGNLINLEAFYFHGCS 126
>gi|187779428|ref|ZP_02995901.1| hypothetical protein CLOSPO_03024 [Clostridium sporogenes ATCC
15579]
gi|187773053|gb|EDU36855.1| leucine Rich Repeat protein [Clostridium sporogenes ATCC 15579]
Length = 335
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
++ L NL+ L++ C ++ + + LK L+ LD+S+N +L GL NLTNL+ L ++
Sbjct: 145 VSTLKNLENLEIVDCKLSNVSIVKDLKRLKRLDISNNEI--SNLNGLENLTNLKELYMAN 202
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N + NL L LD+ D IT+I+ ++ S
Sbjct: 203 NNIANLKPIHNLLKLTNLDISDNKITSIKELKNMKS 238
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 12/123 (9%)
Query: 1 LANLRYLQVLDLS-ANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L NL L+++D +N +I + +L LK+LD+ I+ + GL L NL+ L
Sbjct: 148 LKNLENLEIVDCKLSNVSI---------VKDLKRLKRLDISNNEISNLNGLENLTNLKEL 198
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
+++N +L+ + NL L LD+S N+ + L N+ ++K L++ + I+ ++GI+
Sbjct: 199 YMANNNI--ANLKPIHNLLKLTNLDISDNKITSIKELKNMKSIKELNICNNNISNLEGIE 256
Query: 120 QFT 122
+
Sbjct: 257 NMS 259
>gi|449268402|gb|EMC79270.1| Leucine-rich repeat-containing protein 31, partial [Columba livia]
Length = 487
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 25/114 (21%)
Query: 7 LQVLDLSANYNI-TSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY 65
L+VLDLS N +I +S + L N+ LK+L+L CG+ K +L+ LD +
Sbjct: 167 LEVLDLSINKHIGSSMKVIAQDLKNVPGLKELNLHMCGL-------KQDSLQGLDTA--- 216
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQNL------TTLGLANLPNLKTLDLRDCGIT 113
L +L L+ LD+SGN+ + T+ LA+L NL+ LDL C +T
Sbjct: 217 --------LQHLAELRKLDISGNKEIGGGFKDATVHLASLKNLEVLDLHQCCVT 262
>gi|307108381|gb|EFN56621.1| hypothetical protein CHLNCDRAFT_57520 [Chlorella variabilis]
Length = 790
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC------GITTIQGLAKLK 54
L LR L L+L + +T L L + LT L+ L+L GC ++ GL L
Sbjct: 398 LPTLRSLAALNLQECWQVTDRGLAHL--SGLTRLEDLNLQGCRNLANGAGQSLSGLGALH 455
Query: 55 NLEALDL-SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
L +L + + G+L+ L LT+L+ LDLSG + LT GLA L +L+ L
Sbjct: 456 RLTSLCMRGCDRLADGALDFLPGLTSLRQLDLSGCKELTADGLAPLSSLRLL 507
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG---LAKLKNLE 57
+A R L+ LD++ +T L+ L L +L+L GC G L L++L
Sbjct: 346 VARCRGLRALDMAGCTGVTDEGTGFTQLSRLQQLSELNLKGCYSLADDGLELLPTLRSLA 405
Query: 58 ALDLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNL------TTLGLANLPNLKTLDLRDC 110
AL+L + + L L+ LT L+ L+L G +NL + GL L L +L +R C
Sbjct: 406 ALNLQECWQVTDRGLAHLSGLTRLEDLNLQGCRNLANGAGQSLSGLGALHRLTSLCMRGC 465
>gi|77455264|gb|ABA86441.1| CG12283 [Drosophila erecta]
Length = 867
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSNY 65
QVLD+S N + + S + ANL NL+KL L C I I+ L NL LDLS N
Sbjct: 116 QVLDMSGN-KLQTLSNEQFIRANLLNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNL 174
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTI 115
+ L ++ +L+ L L+ N + + N P+L LDL C I TI
Sbjct: 175 LVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNTPSLHKLDLSHCDIQTI 226
>gi|300869844|ref|YP_003784715.1| hypothetical protein BP951000_0207 [Brachyspira pilosicoli 95/1000]
gi|300687543|gb|ADK30214.1| leucine-rich repeat-containing protein [Brachyspira pilosicoli
95/1000]
Length = 288
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 30/140 (21%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQ-GLAKLKNLEAL 59
+ NL+ L+VL++S N N+ + + L N+K LDL IT I ++ LKN+EAL
Sbjct: 117 IINLKKLEVLNISKN-NLND---IQEEIFYLENIKNLDLSANKITNIDLKISNLKNIEAL 172
Query: 60 DLSSN---------------YYLHGSL-------EGLANLTNLQVLDLSGNQNLTTL--G 95
DLSSN YL+ S E L NLTNLQ+L L G+ NL +
Sbjct: 173 DLSSNNIEIIPKEIAYLKKLKYLNISYNKYKTLPEELFNLTNLQIL-LIGSNNLKEISDS 231
Query: 96 LANLPNLKTLDLRDCGITTI 115
+ L NL+ LD+ I +
Sbjct: 232 ICKLTNLEELDILSSSIKNL 251
>gi|297846642|ref|XP_002891202.1| hypothetical protein ARALYDRAFT_891227 [Arabidopsis lyrata subsp.
lyrata]
gi|297337044|gb|EFH67461.1| hypothetical protein ARALYDRAFT_891227 [Arabidopsis lyrata subsp.
lyrata]
Length = 1007
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 59/114 (51%), Gaps = 28/114 (24%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNLEA 58
+ N++ L LDLSAN N+ SG L + NLTNL +L L+G ++ G++ L NLE+
Sbjct: 461 IWNMKQLGELDLSAN-NL-SGELPE-AIGNLTNLSRLRLNGNQLSGRVPAGISFLTNLES 517
Query: 59 LDLSSNYY-------------LH----------GSLEGLANLTNLQVLDLSGNQ 89
LDLSSN + LH G + GL LT L LDLS NQ
Sbjct: 518 LDLSSNRFSSQIPQTFDSFLKLHEMNLSRNNFDGRIPGLTKLTQLTHLDLSHNQ 571
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 53 LKNLEALDLSSNYYLHGSL-EGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRD 109
+K L LDLS+N L G L E + NLTNL L L+GNQ G++ L NL++LDL
Sbjct: 464 MKQLGELDLSAN-NLSGELPEAIGNLTNLSRLRLNGNQLSGRVPAGISFLTNLESLDLSS 522
Query: 110 CGITTIQGIQQFTSY 124
++ Q Q F S+
Sbjct: 523 NRFSS-QIPQTFDSF 536
>gi|240279860|gb|EER43365.1| protein phosphatase PP1 regulatory subunit sds22 [Ajellomyces
capsulatus H143]
Length = 360
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
LTNLK + L +TTI GL+ L NLE L +S N ++ GL N TNL+VLD+S NQ
Sbjct: 225 LTNLKIISLPSNRLTTISGLSNLHNLEELYVSHNAI--TAISGLENNTNLRVLDISSNQ 281
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSS 63
LR L+ L+L+AN I L +LT L++L L IT I+ + L NL+ + L S
Sbjct: 181 LRALRNLELAAN-RIREIE----NLDDLTALEELWLGKNKITEIKNIDALTNLKIISLPS 235
Query: 64 NYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N ++ GL+NL NL+ L +S N GL N NL+ LD+ I+ ++ I +
Sbjct: 236 NRL--TTISGLSNLHNLEELYVSHNAITAISGLENNTNLRVLDISSNQISKLENISHLS 292
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L L+ L+L I I+ L L LE L L N ++ + LTNL+++ L
Sbjct: 177 GLDGLRALRNLELAANRIREIENLDDLTALEELWLGKNKI--TEIKNIDALTNLKIISLP 234
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ T GL+NL NL+ L + IT I G++ T
Sbjct: 235 SNRLTTISGLSNLHNLEELYVSHNAITAISGLENNT 270
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 18 ITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
+ S LT + GL+NL NL++L + IT I GL NL LD+SSN LE +++
Sbjct: 233 LPSNRLTTISGLSNLHNLEELYVSHNAITAISGLENNTNLRVLDISSNQI--SKLENISH 290
Query: 77 LTNLQVLDLSGNQNLTTLG 95
L++L+ S NQ L + G
Sbjct: 291 LSHLEEFWASNNQ-LASFG 308
>gi|194211518|ref|XP_001497675.2| PREDICTED: protein phosphatase 1 regulatory subunit 7-like [Equus
caballus]
Length = 378
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
++NLR LQ+L+L +N I + + LTNL+ L L IT +Q L L NL L
Sbjct: 251 ISNLRQLQMLELGSN-RIRAIE----NIDTLTNLESLFLGKNKITKLQNLDALTNLTVLS 305
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ SN +EGL NL NL+ L LS N GL N L LD+ I I+ I
Sbjct: 306 MQSNRL--TKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDVASNRIKKIENISH 363
Query: 121 FTS 123
T
Sbjct: 364 LTE 366
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 1 LANLRYLQVLDLSAN--YNITS-GSLTRLG--------------LANLTNLKKLDLDGCG 43
L L L++LD+S N NI LTRL ++NL L+ L+L
Sbjct: 207 LEALTELEILDISFNLLRNIEGIDKLTRLKKLFLVNNKINKIENISNLRQLQMLELGSNR 266
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
I I+ + L NLE+L L N L+ L LTNL VL + N+ GL NL NL+
Sbjct: 267 IRAIENIDTLTNLESLFLGKNKI--TKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLR 324
Query: 104 TLDLRDCGITTIQGIQ 119
L L GI I+G++
Sbjct: 325 ELYLSHNGIEVIEGLE 340
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 7 LQVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
LQ LD N + S RL GL NL NL++L L GI I+GL L LD++
Sbjct: 292 LQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDVA 351
Query: 63 SNYYLHGSLEGLANLTNLQ 81
SN +E +++LT LQ
Sbjct: 352 SNRI--KKIENISHLTELQ 368
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LT L+ LD+ + I+G+ KL L+ L L +N +E ++NL LQ+L+L
Sbjct: 207 LEALTELEILDISFNLLRNIEGIDKLTRLKKLFLVNNKI--NKIENISNLRQLQMLELGS 264
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ + L NL++L L IT +Q + T
Sbjct: 265 NRIRAIENIDTLTNLESLFLGKNKITKLQNLDALT 299
>gi|194861035|ref|XP_001969702.1| GG10236 [Drosophila erecta]
gi|190661569|gb|EDV58761.1| GG10236 [Drosophila erecta]
Length = 883
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSNY 65
QVLD+S N + + S + ANL NL+KL L C I I+ L NL LDLS N
Sbjct: 124 QVLDMSGN-KLQTLSNEQFIRANLLNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNL 182
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTI 115
+ L ++ +L+ L L+ N + + N P+L LDL C I TI
Sbjct: 183 LVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNTPSLHKLDLSHCDIQTI 234
>gi|428313363|ref|YP_007124340.1| Leucine Rich Repeat (LRR)-containing protein [Microcoleus sp. PCC
7113]
gi|428254975|gb|AFZ20934.1| Leucine Rich Repeat (LRR)-containing protein [Microcoleus sp. PCC
7113]
Length = 254
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 60/135 (44%), Gaps = 25/135 (18%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LA L+VL L +N IT + LA LTNLK L L G IT + LA L LE L
Sbjct: 91 LAGFTNLEVLILDSN-QITDVT----PLARLTNLKDLTLAGSQITDLTPLAGLTKLEVLY 145
Query: 61 LSSN--------------------YYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLP 100
L SN Y L LA L NL+ L LSGNQ L L
Sbjct: 146 LESNQIKDINPLAGLANLKTLQLMYNQIADLTPLAGLKNLEALHLSGNQITDITPLGGLK 205
Query: 101 NLKTLDLRDCGITTI 115
NLK L+L + IT I
Sbjct: 206 NLKVLNLDNNQITDI 220
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 62/122 (50%), Gaps = 18/122 (14%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
LA L L+VL L +N +I LA L NLK L L I + LA LKNLEA
Sbjct: 135 LAGLTKLEVLYLESNQIKDINP-------LAGLANLKTLQLMYNQIADLTPLAGLKNLEA 187
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNL----KTLDLRDCG 111
L LS N + L L NL+VL+L NQ ++T L GLANL +L + R C
Sbjct: 188 LHLSGNQITD--ITPLGGLKNLKVLNLDNNQITDITPLAGLANLDSLYVPGNPITQRTCP 245
Query: 112 IT 113
IT
Sbjct: 246 IT 247
>gi|334347498|ref|XP_001364455.2| PREDICTED: protein phosphatase 1 regulatory subunit 7-like isoform
1 [Monodelphis domestica]
Length = 357
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 11/121 (9%)
Query: 1 LANLRYLQVLDLSAN--YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L L L+ LD+S N NI G+ LT+LKKL L I+ I+ ++ L+ L+
Sbjct: 135 LEALTELETLDISFNLLRNIE-------GIDQLTHLKKLFLVNNKISKIENISNLQQLKM 187
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L+L SN ++E + NLTNL L L N+ L L NL L ++ IT I+G+
Sbjct: 188 LELGSNRI--RAIENIDNLTNLDSLFLGKNKITKLQNLDALSNLTVLSMQSNRITKIEGL 245
Query: 119 Q 119
Q
Sbjct: 246 Q 246
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
++NL+ L++L+L +N I + + NLTNL L L IT +Q L L NL L
Sbjct: 179 ISNLQQLKMLELGSNR-IRAIE----NIDNLTNLDSLFLGKNKITKLQNLDALSNLTVLS 233
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ SN +EGL NL NL+ L LS N GL N L LD+ I I+ +
Sbjct: 234 MQSNRI--TKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENVSH 291
Query: 121 FTS 123
T
Sbjct: 292 LTE 294
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L L +L++LDL I I+ L L LE LD+S N L ++EG+ LT+L+ L L
Sbjct: 113 LEELQSLRELDLYDNQIKRIENLEALTELETLDISFN--LLRNIEGIDQLTHLKKLFLVN 170
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ ++NL LK L+L I I+ I T+
Sbjct: 171 NKISKIENISNLQQLKMLELGSNRIRAIENIDNLTN 206
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 7 LQVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
LQ LD +N + S R+ GL NL NL++L L GI I+GL L LD++
Sbjct: 220 LQNLDALSNLTVLSMQSNRITKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIA 279
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGN 88
SN +E +++LT LQ ++ N
Sbjct: 280 SNRI--KKIENVSHLTELQEFWMNDN 303
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 37 LDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGL 96
+DL+ I I+G LK +++L L N L +E L L +L+ LDL NQ L
Sbjct: 78 IDLNHYRIGKIEGFEVLKKVKSLCLRQN--LIKCIENLEELQSLRELDLYDNQIKRIENL 135
Query: 97 ANLPNLKTLDLRDCGITTIQGIQQFT 122
L L+TLD+ + I+GI Q T
Sbjct: 136 EALTELETLDISFNLLRNIEGIDQLT 161
>gi|325840710|ref|ZP_08167130.1| putative internalin A [Turicibacter sp. HGF1]
gi|325490216|gb|EGC92551.1| putative internalin A [Turicibacter sp. HGF1]
Length = 510
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 56/109 (51%), Gaps = 21/109 (19%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL L LD + YNI+ GL+NLTNL L LD I I LA L NL ALD
Sbjct: 192 LSNLTEL-TLDHNQIYNIS-------GLSNLTNLITLTLDRNQIEDISALATLINLNALD 243
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ-----------NLTTLGLAN 98
LS N + LA+LT L VL L NQ NLT LGL+N
Sbjct: 244 LSYNQI--KIINALASLTRLSVLYLDYNQINDLSALSSLINLTKLGLSN 290
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L +LQ+L L+ N + SL L+NL +L LD I I GL+ L NL L
Sbjct: 167 LHQLVHLQMLHLADNEIVDISSLN-----TLSNLTELTLDHNQIYNISGLSNLTNLITLT 221
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
L N + LA L NL LDLS NQ LA+L L L
Sbjct: 222 LDRNQI--EDISALATLINLNALDLSYNQIKIINALASLTRLSVL 264
>gi|291389677|ref|XP_002711315.1| PREDICTED: leucine-rich repeats and IQ motif containing 1
[Oryctolagus cuniculus]
Length = 1647
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA TNL+ L L CG+T++ GL L+ +D N H NL NL V+ L+
Sbjct: 804 LAECTNLQFLSLRRCGLTSLHGLGNCHKLKYIDAQEN---HIETINCENLENLCVVLLNK 860
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
NQ + GL N++ L++ IT I G++
Sbjct: 861 NQLTSFHGLDGCTNIQNLEVSHNKITRIGGLESL 894
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L N L+ +D N+ + + NL NL + L+ +T+ GL N++ L+
Sbjct: 826 LGNCHKLKYIDAQENH------IETINCENLENLCVVLLNKNQLTSFHGLDGCTNIQNLE 879
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
+S N + GL +L NLQ L + NQ ++T GL + P + LD +T ++GI
Sbjct: 880 VSHNKITR--IGGLESLKNLQQLFVDHNQLISTKGLCDTPTIIHLDCSYNHLTDVEGI 935
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 15 NYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEG 73
N ++ +TR+G L +L NL++L +D + + +GL + LD S N+ +EG
Sbjct: 877 NLEVSHNKITRIGGLESLKNLQQLFVDHNQLISTKGLCDTPTIIHLDCSYNHLT--DVEG 934
Query: 74 LANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
+ N LQ+L L GN L N L+ L L D +I ++ F+SY
Sbjct: 935 IDNCGLLQILKLQGNYLSELPSLDNHVLLRELYLDD---NSISAVEAFSSY 982
>gi|4633068|gb|AAD26612.1| protein phosphatase-1 regulatory subunit 7 beta1 [Homo sapiens]
gi|15214546|gb|AAH12397.1| PPP1R7 protein [Homo sapiens]
gi|15278126|gb|AAH13001.1| PPP1R7 protein [Homo sapiens]
gi|30583431|gb|AAP35960.1| protein phosphatase 1, regulatory subunit 7 [Homo sapiens]
Length = 280
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 1 LANLRYLQVLDLSAN--YNITS-GSLTRL--------------GLANLTNLKKLDLDGCG 43
L L L++LD+S N NI LTRL L+NL L+ L+L
Sbjct: 138 LEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNR 197
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
I I+ + L NLE+L L N L+ L LTNL VL + N+ GL NL NL+
Sbjct: 198 IRAIENIDTLTNLESLFLGKNKI--TKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLR 255
Query: 104 TLDLRDCGITTIQGIQ 119
L L GI I+G++
Sbjct: 256 ELYLSHNGIEVIEGLE 271
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL LQ+L+L +N I + + LTNL+ L L IT +Q L L NL L
Sbjct: 182 LSNLHQLQMLELGSNR-IRAIE----NIDTLTNLESLFLGKNKITKLQNLDALTNLTVLS 236
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLAN 98
+ SN +EGL NL NL+ L LS N GL N
Sbjct: 237 MQSNRL--TKIEGLQNLVNLRELYLSHNGIEVIEGLEN 272
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LT L+ LD+ + I+G+ KL L+ L L +N +E L+NL LQ+L+L
Sbjct: 138 LEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKI--SKIENLSNLHQLQMLELGS 195
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ + L NL++L L IT +Q + T+
Sbjct: 196 NRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTN 231
>gi|297816626|ref|XP_002876196.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322034|gb|EFH52455.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 857
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL L+VLDL +N SG L L NL NL+ LDL G+ +L+ L+ L
Sbjct: 95 LRNLTSLEVLDLK--FNEFSGQLPTQELTNLRNLRALDLSN---NQFSGICRLEQLQELR 149
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
LS N ++ + + LQVLDLS N
Sbjct: 150 LSRNRFVGEIPLCFSRFSKLQVLDLSSNH 178
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 31/104 (29%)
Query: 48 QGLAKLKNLEALDLSSNYY-----------------------LHG--SLEGLANLTNLQV 82
+GL +NLE LDL N+Y G ++ L NLT+L+V
Sbjct: 44 KGLGSFRNLETLDLGVNFYDSSVFPYLNEAVSLKTLILRDNLFKGGFPVQELRNLTSLEV 103
Query: 83 LDLSGNQ---NLTTLGLANLPNLKTLDLRD---CGITTIQGIQQ 120
LDL N+ L T L NL NL+ LDL + GI ++ +Q+
Sbjct: 104 LDLKFNEFSGQLPTQELTNLRNLRALDLSNNQFSGICRLEQLQE 147
>gi|255030270|ref|ZP_05302221.1| hypothetical protein LmonL_16386 [Listeria monocytogenes LO28]
Length = 281
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L NL L+L I+ + L L NL +L+LSSN L +L G+ +L NLQ L++S
Sbjct: 177 GLQYLENLTSLNLSENNISDLAPLKDLVNLVSLNLSSNRTLV-NLSGVEDLVNLQELNVS 235
Query: 87 GNQNLTTLG-LANLPNLKTLDLRDCGITTIQ 116
N+ L + +A+LP LK + + C I T++
Sbjct: 236 ANKALEDISQVASLPVLKEISAQGCNIKTLE 266
>gi|224029509|gb|ACN33830.1| unknown [Zea mays]
gi|414883333|tpg|DAA59347.1| TPA: hypothetical protein ZEAMMB73_995024 [Zea mays]
Length = 726
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 10/125 (8%)
Query: 1 LANLRYLQVLDLSAN--YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L+ L+VL+LS N +T+G+L + L L L I+TI+GL +L L
Sbjct: 470 LSAFSGLRVLNLSGNSIVRVTAGALPK-------GLHMLSLSKNNISTIEGLRELTRLRL 522
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
LD+S N + GLA+ ++L+ L L+GN+ GL L LK LDLR I+T +G+
Sbjct: 523 LDISYNR-ISRIGHGLASCSSLKELYLAGNKISEVDGLHRLLKLKILDLRHNKISTSKGL 581
Query: 119 QQFTS 123
Q +
Sbjct: 582 GQLAA 586
>gi|328766934|gb|EGF76986.1| hypothetical protein BATDEDRAFT_36157 [Batrachochytrium
dendrobatidis JAM81]
Length = 651
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 71/121 (58%), Gaps = 11/121 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLT--NLKKLDLDGCGITTIQGLAKLKNLEA 58
L +++YL +DLS+N LT + + NL+++DL ITTI+ L++ + L
Sbjct: 167 LGSMQYLVQIDLSSN------RLTDVLAFDPPPHNLQQVDLSRNQITTIRDLSQHRFLTY 220
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L+L SN L + GL++ NL+ L ++ N GL +LP L+ LDLR+ ITT++GI
Sbjct: 221 LNLDSN--LICDITGLSDCKNLRHLCMANNGITCIDGLVHLP-LRMLDLRNNRITTLKGI 277
Query: 119 Q 119
+
Sbjct: 278 E 278
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 12/120 (10%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L+ R+L L+L +N +IT GL++ NL+ L + GIT I GL L L
Sbjct: 212 LSQHRFLTYLNLDSNLICDIT-------GLSDCKNLRHLCMANNGITCIDGLVHLP-LRM 263
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
LDL +N +L+G+ L L+ + LS N ++ L + P+L++LD+ I I +
Sbjct: 264 LDLRNNRI--TTLKGIETLLKLEQVQLSKNAIVSVEELKDHPSLRSLDIESNFIADIDQV 321
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +L L+ LDL ITT++G+ L LE + LS N + S+E L + +L+ LD+
Sbjct: 255 GLVHLP-LRMLDLRNNRITTLKGIETLLKLEQVQLSKNAIV--SVEELKDHPSLRSLDIE 311
Query: 87 GN--QNLTTLG-LANLPNLKTLDLRDCGITTIQG 117
N ++ + L LP L + LR+ T +
Sbjct: 312 SNFIADIDQVYILVTLPRLHEVRLRNNPFTNLPA 345
>gi|441469813|emb|CCQ19568.1| Internalin-A [Listeria monocytogenes]
Length = 201
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 24 TRLGLANLTN-LKKLDLDGC------GITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
T G +N+T+ + + DLDG G+TTI+G+ L NL +L+L N + L L N
Sbjct: 14 TATGKSNVTDTVTQADLDGILSAFNTGVTTIEGIQYLNNLISLELKDNQITN--LTPLKN 71
Query: 77 LTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
LT + L+LSGN +A L ++KTLDL IT +
Sbjct: 72 LTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 110
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 91 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITDISPLAGLTNLQYL 144
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
+ + L LANL+ L L N+ LA LPNL + L+D IT
Sbjct: 145 SIGNTQV--SDLTPLANLSKLTNLRADDNKISDISPLAGLPNLIEVHLKDNQIT 196
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 69 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 121
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L L N + LA LTNLQ L + Q LANL L L D I+ I +
Sbjct: 122 LYLDLNQI--TDISPLAGLTNLQYLSIGNTQVSDLTPLANLSKLTNLRADDNKISDISPL 179
>gi|344302918|gb|EGW33192.1| hypothetical protein SPAPADRAFT_60516, partial [Spathaspora
passalidarum NRRL Y-27907]
Length = 352
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L NLT LK L+L G I I+ L N+E L L N E L ++ NL+VL +
Sbjct: 187 NLENLTKLKNLELGGNKIEKIENLDNNVNIEQLWLGKNRIY--KFENLNHMVNLRVLSIQ 244
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
N+ GL NL NL+ L L GI I+ ++
Sbjct: 245 SNRITKIEGLENLINLEELYLSHNGIEKIENLEH 278
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 18 ITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
I S +T++ GL NL NL++L L GI I+ L NL+ LD++SN H +E L +
Sbjct: 243 IQSNRITKIEGLENLINLEELYLSHNGIEKIENLEHNVNLQVLDVTSNKLKH--IENLKH 300
Query: 77 LTNLQVLDLSGNQ 89
LT L S NQ
Sbjct: 301 LTKLTDFWCSYNQ 313
>gi|332027124|gb|EGI67219.1| Protein phosphatase 1 regulatory subunit 7 [Acromyrmex echinatior]
Length = 329
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL NLTNL L IT IQ L LKNL L L SN +E + L L L LS
Sbjct: 167 GLENLTNLF---LGKNKITKIQNLENLKNLTLLSLQSNRI--TKIENIEELKKLNQLYLS 221
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N + G+ N P L TLDL + I IQ + S
Sbjct: 222 ENGIMCIEGIENCPELTTLDLANNKIKKIQNMDHLES 258
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH-GSLEGLANLTNLQVLDL 85
GL+NL NL+KL L I I+ ++ L NL L+L N +LEGL NLTNL
Sbjct: 120 GLSNLLNLQKLFLSSNKILQIENISHLTNLVTLELGDNKIREIENLEGLENLTNL----F 175
Query: 86 SGNQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQQF 121
G +T + L NL NL L L+ IT I+ I++
Sbjct: 176 LGKNKITKIQNLENLKNLTLLSLQSNRITKIENIEEL 212
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 21/128 (16%)
Query: 13 SANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH--- 68
S + LT+L L LT +++L I I+ L L +L L+L N +
Sbjct: 39 SEELDFNHSRLTKLENLEPLTQVRRLCFTWNLIKKIENLDTLISLVELELRDNQIITIEN 98
Query: 69 -----------------GSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCG 111
+EGL+NL NLQ L LS N+ L +++L NL TL+L D
Sbjct: 99 LDALLNLELLDLSFNRIKKIEGLSNLLNLQKLFLSSNKILQIENISHLTNLVTLELGDNK 158
Query: 112 ITTIQGIQ 119
I I+ ++
Sbjct: 159 IREIENLE 166
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L NL NL L L IT I+ + +LK L L LS N + +EG+ N L LDL+
Sbjct: 186 NLENLKNLTLLSLQSNRITKIENIEELKKLNQLYLSENGIM--CIEGIENCPELTTLDLA 243
Query: 87 GNQNLTTLGLANLPNLKTLD 106
N+ + N+ +L++L+
Sbjct: 244 NNK---IKKIQNMDHLESLE 260
>gi|299749748|ref|XP_001836305.2| protein phosphatase regulatory subunit [Coprinopsis cinerea
okayama7#130]
gi|298408582|gb|EAU85489.2| protein phosphatase regulatory subunit [Coprinopsis cinerea
okayama7#130]
Length = 396
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +LTNL L+L G I I+ L L NLE L L N LEGL++L L++L +
Sbjct: 214 GLESLTNLTSLELGGNRIRKIENLDTLVNLEELWLGKNKI--TKLEGLSSLKKLRILSIQ 271
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ G+ L +L+ L L GI I+ +++ T
Sbjct: 272 SNRITKLEGVEGLESLEELYLSHNGIKKIENLEKNT 307
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 18/117 (15%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L++L+ L++L +I S +T+L G+ L +L++L L GI I+ L K NL L
Sbjct: 259 LSSLKKLRIL------SIQSNRITKLEGVEGLESLEELYLSHNGIKKIENLEKNTNLTTL 312
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQ 116
D+ N+ ++EG+++L L+ L +SGN+ +P+ LD GI T++
Sbjct: 313 DIGYNFL--EAIEGVSHLNKLEELWISGNK---------IPDFSGLDKELRGIKTLR 358
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L L NL++L L IT ++GL+ LK L L + SN LEG+ L +L+ L LS
Sbjct: 237 LDTLVNLEELWLGKNKITKLEGLSSLKKLRILSIQSNRI--TKLEGVEGLESLEELYLSH 294
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
N L NL TLD+ + I+G+
Sbjct: 295 NGIKKIENLEKNTNLTTLDIGYNFLEAIEGVSHL 328
>gi|443314455|ref|ZP_21044013.1| Leucine Rich Repeat (LRR)-containing protein [Leptolyngbya sp. PCC
6406]
gi|442785951|gb|ELR95733.1| Leucine Rich Repeat (LRR)-containing protein [Leptolyngbya sp. PCC
6406]
Length = 344
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 55/107 (51%), Gaps = 15/107 (14%)
Query: 8 QVLDLSANYNITSGSLTRLGL-----------ANLTNLKKLDLDGCGITTIQGLAKLKNL 56
QV DLS N+ + L RLGL A L L+ LDL IT I L+ L L
Sbjct: 217 QVSDLSPLQNLEN--LLRLGLNRNQITDIAPLAALDTLQTLDLSHNQITNIAPLSTLTAL 274
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
E LD+S+N + + LA+L NLQ L+L+ NQ L LPNL+
Sbjct: 275 EVLDMSTNEVV--DVTPLASLMNLQELNLNRNQVFDATPLRQLPNLE 319
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L NL NL +L L+ IT I LA L L+ LDLS N ++ L+ LT L+VLD+S
Sbjct: 223 PLQNLENLLRLGLNRNQITDIAPLAALDTLQTLDLSHNQI--TNIAPLSTLTALEVLDMS 280
Query: 87 GNQNLTTLGLANLPNLKTLDL 107
N+ + LA+L NL+ L+L
Sbjct: 281 TNEVVDVTPLASLMNLQELNL 301
>gi|395226193|ref|ZP_10404687.1| Leucine Rich Repeat (LRR)-containing protein [Thiovulum sp. ES]
gi|394445591|gb|EJF06485.1| Leucine Rich Repeat (LRR)-containing protein [Thiovulum sp. ES]
Length = 294
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 54/114 (47%), Gaps = 21/114 (18%)
Query: 1 LANLRYL-----QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKN 55
NL YL QV D+SA L NLTNLK+LDL ++ I L L N
Sbjct: 109 FINLTYLNLNTNQVSDISA-------------LKNLTNLKELDLTKNQVSDISSLKNLVN 155
Query: 56 LEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ-NLTTLGLANLPNLKTLDLR 108
LE L L N + L NLTNL+ LDL N+ N + N NL L+L+
Sbjct: 156 LEELYLWENKI--SDISALKNLTNLKELDLRKNKINFIPKWIGNFINLTYLNLQ 207
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G N NL L+L+ ++ I L L NL+ LDL+ N + L NL NL+ L L
Sbjct: 105 GFENFINLTYLNLNTNQVSDISALKNLTNLKELDLTKNQV--SDISSLKNLVNLEELYLW 162
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTI 115
N+ L NL NLK LDLR I I
Sbjct: 163 ENKISDISALKNLTNLKELDLRKNKINFI 191
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 42 CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
I+ I G NL L+L++N + L NLTNL+ LDL+ NQ L NL N
Sbjct: 98 SDISDISGFENFINLTYLNLNTNQV--SDISALKNLTNLKELDLTKNQVSDISSLKNLVN 155
Query: 102 LKTLDLRDCGITTIQGIQQFT 122
L+ L L + I+ I ++ T
Sbjct: 156 LEELYLWENKISDISALKNLT 176
>gi|226372416|gb|ACO51833.1| phosphatase 1 regulatory subunit 7 [Rana catesbeiana]
Length = 345
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 27/140 (19%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L NL LQ+LDLS N L R+ GL +LT L++L L I+ I+ L+ L L L
Sbjct: 123 LENLSQLQILDLSFNL------LKRIEGLESLTQLQRLYLVNNKISRIEALSSLTKLRLL 176
Query: 60 DLSSNYYLH--------------------GSLEGLANLTNLQVLDLSGNQNLTTLGLANL 99
+L SN L+G L+NL VL + N+ GL +L
Sbjct: 177 ELGSNRIREIENLDTLRDLDSLFLGKNKITKLQGGEALSNLTVLSVQSNRLTKIEGLQSL 236
Query: 100 PNLKTLDLRDCGITTIQGIQ 119
NL+ L L D GI ++G++
Sbjct: 237 VNLRELYLSDNGIQVLEGLE 256
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 28 LANLTNLKKLD---LDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLD 84
+ NL L+ LD L IT +QG L NL L + SN +EGL +L NL+ L
Sbjct: 186 IENLDTLRDLDSLFLGKNKITKLQGGEALSNLTVLSVQSNRL--TKIEGLQSLVNLRELY 243
Query: 85 LSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
LS N GL N L TLD+ I I+ I+ T
Sbjct: 244 LSDNGIQVLEGLENNTKLTTLDVASNRIKRIENIRHLTE 282
>gi|424836090|ref|ZP_18260747.1| leucine-rich repeat-containing protein [Clostridium sporogenes PA
3679]
gi|365977492|gb|EHN13591.1| leucine-rich repeat-containing protein [Clostridium sporogenes PA
3679]
Length = 332
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
++ L NL+ L++ C ++ + + LK L+ LD+S+N +L GL NLTNL+ L ++
Sbjct: 142 VSTLKNLENLEIVDCKLSNVSIVKDLKRLKRLDISNNEI--NNLNGLENLTNLKELYMAN 199
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N + NL L LD+ D IT+I+ ++ S
Sbjct: 200 NNIANLKPIHNLLKLTNLDISDNKITSIKELKNMKS 235
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 66/123 (53%), Gaps = 12/123 (9%)
Query: 1 LANLRYLQVLDLS-ANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L NL L+++D +N +I + +L LK+LD+ I + GL L NL+ L
Sbjct: 145 LKNLENLEIVDCKLSNVSI---------VKDLKRLKRLDISNNEINNLNGLENLTNLKEL 195
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
+++N +L+ + NL L LD+S N+ + L N+ ++K L++ + I+ ++GI+
Sbjct: 196 YMANNNI--ANLKPIHNLLKLTNLDISDNKITSIKELKNMKSIKELNICNNNISNLEGIE 253
Query: 120 QFT 122
+
Sbjct: 254 NMS 256
>gi|359482731|ref|XP_003632819.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At4g36180-like [Vitis vinifera]
Length = 918
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 1 LANLRYLQVLDLSANY----------NITS------------GSLTRLGLANLTNLKKLD 38
L++L+ L++LD+S N ITS GS + LA+L NL+ LD
Sbjct: 110 LSSLKKLEILDISGNEFDKSALKSLGTITSLKTLAICSMGLYGSFSIRELASLRNLEGLD 169
Query: 39 L---DGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG 95
L D +QG +L L+ LDLS N + L N T+L++LDLS N L
Sbjct: 170 LSYNDLESFQLLQGFCQLNKLQELDLSYNLFQGILPPCLNNFTSLRLLDLSANLFSGNLS 229
Query: 96 LANLPNLKTLDLRDCGITTIQG 117
LPNL +L+ D +G
Sbjct: 230 SPLLPNLTSLEYIDLSYNQFEG 251
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 47 IQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG---NQNLTTLGLANLPNLK 103
+GL+ LK LE LD+S N + +L+ L +T+L+ L + + + LA+L NL+
Sbjct: 107 FKGLSSLKKLEILDISGNEFDKSALKSLGTITSLKTLAICSMGLYGSFSIRELASLRNLE 166
Query: 104 TLDLRDCGITTIQGIQQF 121
LDL + + Q +Q F
Sbjct: 167 GLDLSYNDLESFQLLQGF 184
>gi|356561456|ref|XP_003548997.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
GSO2-like [Glycine max]
Length = 977
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI--TTIQGLAKLKNLEA 58
L L+ ++ LDLS YN S + + NL+ L+L C + + KL +L +
Sbjct: 108 LIALQNIEHLDLS--YNAFQWSHIPEFMGSFANLRYLNLSYCAFVGSIPSDIGKLTHLLS 165
Query: 59 LDLSSNYYLHGSLE-GLANLTNLQVLDLSGN 88
LDL +N++LHG + L NLT+LQ LDLS N
Sbjct: 166 LDLGNNFFLHGKIPYQLGNLTHLQYLDLSYN 196
>gi|85679268|gb|ABC72050.1| InlC2 [Listeria monocytogenes]
Length = 547
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL L+L N L L
Sbjct: 58 TATGKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGMQYLNNLIGLELKDNQITD--LTPL 115
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 116 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLASTQITDV 156
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 115 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLASTQITDVTPLAGLSNLQV 167
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + Q LANL L L D I+ I
Sbjct: 168 LYLDLNQITN--ISPLAGLTNLQYLSIGNTQVSDLTPLANLSKLTNLRADDNKISDI 222
>gi|327267141|ref|XP_003218361.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like [Anolis
carolinensis]
Length = 358
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L L +LK+LDL I TI+ L L LE LD+S N H +EGL LT L+ L L
Sbjct: 114 LEQLQSLKELDLYDNQIRTIENLDALTGLEVLDISFNVLRH--IEGLDQLTQLKKLFLVN 171
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ L+NL L+ L+L I IQ I T
Sbjct: 172 NKINKIENLSNLQQLQILELGSNRIREIQNIDALT 206
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 61/134 (45%), Gaps = 27/134 (20%)
Query: 7 LQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY 65
L+VLD+S N L + GL LT LKKL L I I+ L+ L+ L+ L+L SN
Sbjct: 142 LEVLDISFNV------LRHIEGLDQLTQLKKLFLVNNKINKIENLSNLQQLQILELGSNR 195
Query: 66 YLH--------------------GSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
L+ L LTNL VL + N+ GL NL NL+ L
Sbjct: 196 IREIQNIDALTNLDSLFLGKNKITKLQNLDALTNLTVLSIQSNRLTKIEGLQNLVNLREL 255
Query: 106 DLRDCGITTIQGIQ 119
L GI I+G++
Sbjct: 256 YLSHNGIEVIEGLE 269
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 59/128 (46%), Gaps = 17/128 (13%)
Query: 1 LANLRYLQVLDLSANY-----NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKN 55
L+NL+ LQ+L+L +N NI + LTNL L L IT +Q L L N
Sbjct: 180 LSNLQQLQILELGSNRIREIQNIDA----------LTNLDSLFLGKNKITKLQNLDALTN 229
Query: 56 LEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L L + SN +EGL NL NL+ L LS N GL N L +D+ I I
Sbjct: 230 LTVLSIQSNRL--TKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMVDIAANRIKKI 287
Query: 116 QGIQQFTS 123
+ I T
Sbjct: 288 ENISHLTE 295
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 18 ITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
I S LT++ GL NL NL++L L GI I+GL L +D+++N +E +++
Sbjct: 235 IQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMVDIAANRI--KKIENISH 292
Query: 77 LTNLQVLDLSGN 88
LT LQ ++ N
Sbjct: 293 LTELQEFWMNDN 304
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 37 LDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGL 96
+DL+ I I+G LK ++ L L N L +E L L +L+ LDL NQ T L
Sbjct: 79 VDLNHFRIGKIEGFEVLKKVKTLCLRQN--LIKCIENLEQLQSLKELDLYDNQIRTIENL 136
Query: 97 ANLPNLKTLDLRDCGITTIQGIQQFT 122
L L+ LD+ + I+G+ Q T
Sbjct: 137 DALTGLEVLDISFNVLRHIEGLDQLT 162
>gi|326436243|gb|EGD81813.1| hypothetical protein PTSG_11887 [Salpingoeca sp. ATCC 50818]
Length = 499
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 5 RYLQVLDLSANY----------------NITSGSLTRLGLANLTNLKKLDLDGCGITTIQ 48
+YLQV++LS N+ +++ LT L N T LK LD I T+
Sbjct: 73 KYLQVINLSNNFLQDFRAALSLVDLIKADVSRNRLTELDFCNSTKLKTLDAGRNRIATLD 132
Query: 49 GLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLR 108
L L +L L+L N L + GL L+ LDLS N + + +LP+L+ L +
Sbjct: 133 SLGSLPSLHILNLEHN--LLTTAAGLEGCRALRKLDLSHNAISSLRDIGHLPHLQELRVA 190
Query: 109 DCGITTIQGIQQFTS 123
+ ++++ G++ +S
Sbjct: 191 NNRLSSLDGVESLSS 205
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L +L L +L+L N T+ GL L+KLDL I++++ + L +L+ L
Sbjct: 134 LGSLPSLHILNLEHNLLTTAA-----GLEGCRALRKLDLSHNAISSLRDIGHLPHLQELR 188
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL 107
+++N SL+G+ +L++L VLD S N+ T L +L L+ L+L
Sbjct: 189 VANNRL--SSLDGVESLSSLHVLDASRNKISDTCALQHLTQLQRLNL 233
>gi|348686654|gb|EGZ26469.1| hypothetical protein PHYSODRAFT_443065 [Phytophthora sojae]
Length = 290
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL NLK L L+ G++ I+ L L NL L LS N L +E L L L LDLS
Sbjct: 68 GLEAYYNLKALWLESNGLSKIENLEPLVNLRCLYLSKN--LIEKVENLHTLRELNTLDLS 125
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
N+ + GLA LPNL +L+ +T+ +Q+
Sbjct: 126 ENRIQSLEGLAQLPNLLSLNASRNRLTSSADLQE 159
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 58/117 (49%), Gaps = 14/117 (11%)
Query: 2 ANLRYLQVLD-LSANYNITSGSLTRLGLANLTNLKKLDLDGCG------ITTIQGLAKLK 54
A+ R Q ++ L A YN+ + L GL+ + NL+ L C I ++ L L+
Sbjct: 58 AHFRGFQRIEGLEAYYNLKALWLESNGLSKIENLEPLVNLRCLYLSKNLIEKVENLHTLR 117
Query: 55 NLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG----LANLPNLKTLDL 107
L LDLS N SLEGLA L NL L+ S N+ LT+ LA P L +D+
Sbjct: 118 ELNTLDLSENRI--QSLEGLAQLPNLLSLNASRNR-LTSSADLQELAKCPLLNNIDI 171
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 43 GITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNL 102
G I+GL NL+AL L SN +E L L NL+ L LS N L L L
Sbjct: 62 GFQRIEGLEAYYNLKALWLESNGL--SKIENLEPLVNLRCLYLSKNLIEKVENLHTLREL 119
Query: 103 KTLDLRDCGITTIQGIQQ 120
TLDL + I +++G+ Q
Sbjct: 120 NTLDLSENRIQSLEGLAQ 137
>gi|300122757|emb|CBK23321.2| unnamed protein product [Blastocystis hominis]
Length = 321
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
N+T L + GC +T I G+A L NL +L L SN L ++ + L NL+VL+L N
Sbjct: 29 PNMTELFHVGTQGCKVTRIDGIAHLTNLTSLVLRSN--LIHKMQNMDTLVNLEVLELYDN 86
Query: 89 QNLTTLGLANLPNLKTLDL 107
+ ++L NL+ LDL
Sbjct: 87 KIHEIKHFSHLVNLRVLDL 105
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 25/124 (20%)
Query: 22 SLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNL 80
+TR+ G+A+LTNL L L I +Q + L NLE L+L N +H ++ ++L NL
Sbjct: 43 KVTRIDGIAHLTNLTSLVLRSNLIHKMQNMDTLVNLEVLELYDN-KIH-EIKHFSHLVNL 100
Query: 81 QVLDLSGN-----------QNLTTLGLAN-----------LPNLKTLDLRDCGITTIQGI 118
+VLDLS N Q L L LA+ LP+L+ LDL I I G+
Sbjct: 101 RVLDLSFNKIKEIPDLSPLQRLEELYLASNDIEDMTNVCTLPSLRLLDLGYNSIRHITGV 160
Query: 119 QQFT 122
Q +
Sbjct: 161 QSLS 164
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G+ +L+ L+KL L I TI GL L+ L LDL SN S GL L +LQ L L+
Sbjct: 159 GVQSLSRLEKLFLGRNKIETISGLQGLR-LRILDLQSNRI--RSSRGLETLVDLQELYLA 215
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N G+ L ++ TLDL +T QG+Q F S
Sbjct: 216 YNGIPKIEGMEALRSVNTLDLTHNYLTDTQGMQGFAS 252
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN---LTNLQVLD 84
++L NL+ LDL I I L+ L+ LE L L+SN +E + N L +L++LD
Sbjct: 94 FSHLVNLRVLDLSFNKIKEIPDLSPLQRLEELYLASN-----DIEDMTNVCTLPSLRLLD 148
Query: 85 LSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
L N G+ +L L+ L L I TI G+Q
Sbjct: 149 LGYNSIRHITGVQSLSRLEKLFLGRNKIETISGLQ 183
>gi|423415626|ref|ZP_17392746.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG3O-2]
gi|423428582|ref|ZP_17405586.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG4O-1]
gi|401095791|gb|EJQ03846.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG3O-2]
gi|401124328|gb|EJQ32092.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG4O-1]
Length = 932
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L N++++ L + +IT G L +G LA L +++ L L I+ + L+++K ++ L
Sbjct: 257 LKNIKFISELRQLKSLSITYGELEDIGPLAELEHIEFLTLRNNKISDLSPLSQMKKIKML 316
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQG 117
DL++NY ++ L + +L+ L ++ NQ N G+ L N+K L L + G+T I+
Sbjct: 317 DLNNNYI--KDIKPLFTVKSLKTLTVANNQISNDNLAGIEQLKNVKNLSLSNNGLTNIEH 374
Query: 118 I 118
I
Sbjct: 375 I 375
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 21/140 (15%)
Query: 1 LANLRYLQVLDLSANYN------ITSGSLTRLGLAN-------------LTNLKKLDLDG 41
L+ ++ +++LDL+ NY T SL L +AN L N+K L L
Sbjct: 307 LSQMKKIKMLDLNNNYIKDIKPLFTVKSLKTLTVANNQISNDNLAGIEQLKNVKNLSLSN 366
Query: 42 CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
G+T I+ + +K L LDL+ N ++E L+ L+ +Q L+L N L++L +
Sbjct: 367 NGLTNIEHITSMKKLVELDLAKNEL--ENIEPLSRLSTVQSLNLEENYISDITPLSHLTD 424
Query: 102 LKTLDLRDCGITTIQGIQQF 121
L L L I ++ +Q+
Sbjct: 425 LYDLKLGSNEIRDVRPVQEL 444
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+KL L+G G+ I+ ++ LK L +++S N + L++L NLQ L+L+
Sbjct: 601 GLEYMTNLEKLTLEGVGLKNIEFISNLKQLNNVNVSHNQI--EDITPLSSLENLQWLNLT 658
Query: 87 GN--QNLTTLG 95
N +++T LG
Sbjct: 659 DNRIKDVTVLG 669
>gi|424836082|ref|ZP_18260739.1| putative internalin [Clostridium sporogenes PA 3679]
gi|365977484|gb|EHN13583.1| putative internalin [Clostridium sporogenes PA 3679]
Length = 331
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
++ L NL+ L++ C + + + LKNL+ LD+S+N +L+GL NLTNL+ L +S
Sbjct: 141 ISTLKNLENLEIIDCNLNDVSIVKNLKNLKRLDISNNKI--SNLKGLENLTNLKELYMSN 198
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFTS 123
N N+T + + +L L LD+ D I I+ ++ S
Sbjct: 199 N-NITDIKPMHSLLKLTNLDISDNKINNIKELKNMKS 234
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 12/122 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL L+++D N+ S+ + NL NLK+LD+ I+ ++GL L NL+ L
Sbjct: 144 LKNLENLEIIDC----NLNDVSIVK----NLKNLKRLDISNNKISNLKGLENLTNLKELY 195
Query: 61 LSSNYYLH-GSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
+S+N + L LTNL D+S N+ L N+ ++K L++ + I+ ++GI+
Sbjct: 196 MSNNNITDIKPMHSLLKLTNL---DISDNKINNIKELKNMKSIKELNICNNSISNLEGIE 252
Query: 120 QF 121
Sbjct: 253 NM 254
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 33 NLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA---NLTNLQVLDLSGNQ 89
N+K L + C I ++ ++ LKNLE L++ + +L ++ NL NL+ LD+S N+
Sbjct: 124 NIKTLKIVHCNIKDLEIISTLKNLENLEI-----IDCNLNDVSIVKNLKNLKRLDISNNK 178
Query: 90 NLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
GL NL NLK L + + IT I+ +
Sbjct: 179 ISNLKGLENLTNLKELYMSNNNITDIKPMHSL 210
>gi|225563040|gb|EEH11319.1| phosphatase PP1 regulatory subunit sds22 [Ajellomyces capsulatus
G186AR]
Length = 349
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
LTNLK + L +TTI GL+ L NLE L +S N ++ GL N TNL+VLD+S NQ
Sbjct: 214 LTNLKIISLPSNRLTTISGLSNLHNLEELYVSHNAI--TAISGLENNTNLRVLDISSNQ 270
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 9/120 (7%)
Query: 4 LRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
LR L+ L+L+AN + + L +LT L++L L IT I+ + L NL+ + L
Sbjct: 170 LRALRNLELAAN------RIREIENLDDLTALEELWLGKNKITEIKNIDALTNLKIISLP 223
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
SN ++ GL+NL NL+ L +S N GL N NL+ LD+ I+ ++ I +
Sbjct: 224 SNRL--TTISGLSNLHNLEELYVSHNAITAISGLENNTNLRVLDISSNQISKLENISHLS 281
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L L+ L+L I I+ L L LE L L N ++ + LTNL+++ L
Sbjct: 166 GLDGLRALRNLELAANRIREIENLDDLTALEELWLGKNKI--TEIKNIDALTNLKIISLP 223
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ T GL+NL NL+ L + IT I G++ T
Sbjct: 224 SNRLTTISGLSNLHNLEELYVSHNAITAISGLENNT 259
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 18 ITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
+ S LT + GL+NL NL++L + IT I GL NL LD+SSN LE +++
Sbjct: 222 LPSNRLTTISGLSNLHNLEELYVSHNAITAISGLENNTNLRVLDISSNQI--SKLENISH 279
Query: 77 LTNLQVLDLSGNQ 89
L++L+ S NQ
Sbjct: 280 LSHLEEFWASNNQ 292
>gi|441470006|emb|CCQ19761.1| Internalin-A [Listeria monocytogenes]
Length = 489
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L +G LA+L NL LDL + I+ + + T
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT + L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSNK-VSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|224286675|gb|ACN41041.1| unknown [Picea sitchensis]
Length = 946
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQ-GLAKLKNLEA 58
L+ L+ LDL+ N + GS+ + L N T+LK + L +T TI +L LE
Sbjct: 149 FGRLKALRTLDLTFN-EMLGGSVPK-SLLNCTHLKWIGLANINLTGTIPTEFGRLVELEH 206
Query: 59 LDLSSNYYLHGSLE-GLANLTNLQVLDLSGNQ 89
LDLSSNYYL GS+ L N T+L LDLS N
Sbjct: 207 LDLSSNYYLSGSIPTSLGNCTSLSHLDLSNNS 238
>gi|46445833|ref|YP_007198.1| F-box protein [Candidatus Protochlamydia amoebophila UWE25]
gi|46399474|emb|CAF22923.1| putative F-box protein [Candidatus Protochlamydia amoebophila
UWE25]
Length = 337
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 58/119 (48%), Gaps = 24/119 (20%)
Query: 22 SLTRLGLANL---TNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLT 78
LT +GLA+L L+ LDLDGC T GLA L+ L AL H +L+ NLT
Sbjct: 116 KLTDVGLAHLRPLVALQHLDLDGCSNLTDAGLAHLRPLVALQ-------HLNLKRCDNLT 168
Query: 79 N-----------LQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGITTIQGIQQFTS 123
+ LQ LDL G NLT GLA+L L+ L+LR C T G+ T
Sbjct: 169 DIGLAHLRPLVALQHLDLDGCNNLTDAGLAHLTPLVALQHLNLRGCFKFTDAGLAHLTP 227
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 67/136 (49%), Gaps = 18/136 (13%)
Query: 1 LANLR---YLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLE 57
LA+LR LQ L+L N+T L L L L+ LDLDGC T GLA L L
Sbjct: 147 LAHLRPLVALQHLNLKRCDNLTDIGLAHL--RPLVALQHLDLDGCNNLTDAGLAHLTPLV 204
Query: 58 ALDLSSNYYLHGSLE----GLANLTNL---QVLDLSGNQNLTTLGLANLPN---LKTLDL 107
AL + L G + GLA+LT L Q L+LS NLT GLA+L + L+ L+L
Sbjct: 205 AL---QHLNLRGCFKFTDAGLAHLTPLVALQYLNLSDCSNLTDAGLAHLKSLVALQHLNL 261
Query: 108 RDCGITTIQGIQQFTS 123
C T G+ T
Sbjct: 262 SWCSKLTGAGLAHLTP 277
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 62/138 (44%), Gaps = 29/138 (21%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNL---KKLDLDGCGITTIQGLAKLKNLE 57
L L LQ L+LS G LT GLA+LT L + LDL CG T GLA L L
Sbjct: 50 LTPLTALQHLNLS-----VCGKLTGAGLAHLTPLVALENLDLSQCGKLTDAGLAHLTPLV 104
Query: 58 ALDLSSNYYLHGSLEGLANLTN-----------LQVLDLSGNQNLTTLGLANLPN---LK 103
AL H + G LT+ LQ LDL G NLT GLA+L L+
Sbjct: 105 ALQ-------HLGMRGCRKLTDVGLAHLRPLVALQHLDLDGCSNLTDAGLAHLRPLVALQ 157
Query: 104 TLDLRDCGITTIQGIQQF 121
L+L+ C T G+
Sbjct: 158 HLNLKRCDNLTDIGLAHL 175
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEAL-DLSSNYYLHGSLEGLANLTNL---QVLDLS 86
L L+ L+L GC T GLA LK+L AL L+ ++ + + GLA+LT L Q L+LS
Sbjct: 4 LVALQHLEL-GCCKLTDAGLAHLKSLVALQHLNLSWCDNLTDTGLAHLTPLTALQHLNLS 62
Query: 87 GNQNLTTLGLANLPNL---KTLDLRDCGITTIQGIQQFTS 123
LT GLA+L L + LDL CG T G+ T
Sbjct: 63 VCGKLTGAGLAHLTPLVALENLDLSQCGKLTDAGLAHLTP 102
>gi|298360724|gb|ADI77941.1| truncated internalin A [Listeria monocytogenes]
Length = 403
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L +G LA+L NL LDL + I+ + + T
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSNK-VSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|168699408|ref|ZP_02731685.1| hypothetical protein GobsU_07802 [Gemmata obscuriglobus UQM 2246]
Length = 320
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT--IQGLAKLKNLEA 58
LA+L L LDL A+ N+T + L A LT L LDL G +T ++ LA LKNL
Sbjct: 117 LASLASLTTLDL-ASTNVTDAGVKEL--APLTRLTALDLSGTKVTDAGLKELAPLKNLVT 173
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDL 85
L L S SL+ LA LTNL+ L L
Sbjct: 174 LSLGSTAVTGASLKELAPLTNLKTLHL 200
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 11 DLSANYNITS-----GSLTRLGLANLTNLKKL---DLDGCGITT--IQGLAKLKNLEALD 60
+L+A N+TS +T GL L LKKL L +T ++ LA L +L LD
Sbjct: 68 ELAALRNLTSLKLIGPVVTDAGLKALAPLKKLTTLQLTAAKVTDAGVKELASLASLTTLD 127
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQG 117
L+S ++ LA LT L LDLSG + +T GL L LK L G T + G
Sbjct: 128 LASTNVTDAGVKELAPLTRLTALDLSGTK-VTDAGLKELAPLKNLVTLSLGSTAVTG 183
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 47 IQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANL-P--NLK 103
++GL LKNL L+L L+ LA L NL VLDL +T GL L P NLK
Sbjct: 234 LKGLTPLKNLSDLNLGGTKVTSAGLKELAALKNLTVLDLDVTA-VTDAGLKELTPLTNLK 292
Query: 104 TLDLRDCGITTIQGIQQF 121
L L +TT +G+++F
Sbjct: 293 VLRLVGAKVTT-KGVKEF 309
>gi|406859018|gb|EKD12091.1| protein phosphatases PP1 regulatory subunit sds22 [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 393
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L L+ L+L I IQGL L LE L L N ++GL L NL++L +
Sbjct: 210 GLEGLGKLRNLELAANRIREIQGLETLVGLEELWLGKNKI--TEIKGLETLQNLKILSIQ 267
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
N+ GL+ LP L+ + + +TT+ G+Q
Sbjct: 268 SNRIREITGLSTLPKLEEVYISHNALTTLSGLQ 300
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L L++L L IT I+GL L+NL+ L + SN + GL+ L L+ + +S
Sbjct: 232 GLETLVGLEELWLGKNKITEIKGLETLQNLKILSIQSNRI--REITGLSTLPKLEEVYIS 289
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
N T GL + L+ LD+ + I +++G++
Sbjct: 290 HNALTTLSGLQDCKGLRVLDISNNQIASLRGLE 322
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L NLK L + I I GL+ L LE + +S N +L GL + L+VLD+S
Sbjct: 254 GLETLQNLKILSIQSNRIREITGLSTLPKLEEVYISHNAL--TTLSGLQDCKGLRVLDIS 311
Query: 87 GNQNLTTLGLANLPNLKTL 105
NQ + GL L L+ +
Sbjct: 312 NNQIASLRGLEGLAELEEV 330
>gi|325092988|gb|EGC46298.1| protein phosphatase PP1 regulatory subunit sds22 [Ajellomyces
capsulatus H88]
Length = 344
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
LTNLK + L +TTI GL+ L NLE L +S N ++ GL N TNL+VLD+S NQ
Sbjct: 209 LTNLKIISLPSNRLTTISGLSNLHNLEELYVSHNAI--TAISGLENNTNLRVLDISSNQ 265
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSS 63
LR L+ L+L+AN I L +LT L++L L IT I+ + L NL+ + L S
Sbjct: 165 LRALRNLELAAN-RIREIE----NLDDLTALEELWLGKNKITEIKNIDALTNLKIISLPS 219
Query: 64 NYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N ++ GL+NL NL+ L +S N GL N NL+ LD+ I+ ++ I +
Sbjct: 220 NRL--TTISGLSNLHNLEELYVSHNAITAISGLENNTNLRVLDISSNQISKLENISHLS 276
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L L+ L+L I I+ L L LE L L N ++ + LTNL+++ L
Sbjct: 161 GLDGLRALRNLELAANRIREIENLDDLTALEELWLGKNKI--TEIKNIDALTNLKIISLP 218
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ T GL+NL NL+ L + IT I G++ T
Sbjct: 219 SNRLTTISGLSNLHNLEELYVSHNAITAISGLENNT 254
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 18 ITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
+ S LT + GL+NL NL++L + IT I GL NL LD+SSN LE +++
Sbjct: 217 LPSNRLTTISGLSNLHNLEELYVSHNAITAISGLENNTNLRVLDISSNQI--SKLENISH 274
Query: 77 LTNLQVLDLSGNQNLTTLG 95
L++L+ S NQ L + G
Sbjct: 275 LSHLEEFWASNNQ-LASFG 292
>gi|348577673|ref|XP_003474608.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like [Cavia
porcellus]
Length = 360
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 1 LANLRYLQVLDLSAN--YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L L L++LD+S N NI G+ LT LKKL L I+ I+ L+ L L+
Sbjct: 138 LEALTELEILDISFNLLRNIE-------GIDKLTQLKKLFLVNNKISKIENLSNLHQLQM 190
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L+L SN ++E + LTNLQ L L N+ L L NL L ++ +T I+G+
Sbjct: 191 LELGSNRI--RAIENIDTLTNLQSLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIEGL 248
Query: 119 Q 119
Q
Sbjct: 249 Q 249
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL LQ+L+L +N I + + LTNL+ L L IT +Q L L NL L
Sbjct: 182 LSNLHQLQMLELGSN-RIRAIE----NIDTLTNLQSLFLGKNKITKLQNLDALTNLTVLS 236
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ SN +EGL +L NL+ L LS N GL N L LD+ I I+ I
Sbjct: 237 MQSNRL--TKIEGLQSLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISH 294
Query: 121 FTS 123
T
Sbjct: 295 LTE 297
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 7 LQVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
LQ LD N + S RL GL +L NL++L L GI I+GL L LD++
Sbjct: 223 LQNLDALTNLTVLSMQSNRLTKIEGLQSLVNLRELYLSHNGIEVIEGLENNNKLTMLDIA 282
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGN 88
SN +E +++LT LQ ++ N
Sbjct: 283 SNRI--KKIENISHLTELQEFWMNDN 306
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LT L+ LD+ + I+G+ KL L+ L L +N +E L+NL LQ+L+L
Sbjct: 138 LEALTELEILDISFNLLRNIEGIDKLTQLKKLFLVNNKI--SKIENLSNLHQLQMLELGS 195
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ + L NL++L L IT +Q + T
Sbjct: 196 NRIRAIENIDTLTNLQSLFLGKNKITKLQNLDALT 230
>gi|334183770|ref|NP_564971.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
gi|332196827|gb|AEE34948.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
Length = 1400
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG--ITTIQGLAKLKNLEA 58
+ NL L+ LDLS ++ L+ + NL NLK L+L C + + L NL+
Sbjct: 976 IGNLINLKKLDLSGCSSLVELPLS---IGNLINLKTLNLSECSSLVELPSSIGNLINLQE 1032
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLA--NLPNLKTLDLRDC 110
L LS L + NL NL+ LDLSG +L L L+ NL NLKTL+L C
Sbjct: 1033 LYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLKTLNLSGC 1086
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG--ITTIQGLAKLKNLEA 58
+ NL L+ LDLS ++ L+ + NL NLK L+L GC + + L NL+
Sbjct: 1048 IGNLINLKKLDLSGCSSLVELPLS---IGNLINLKTLNLSGCSSLVELPSSIGNL-NLKK 1103
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLA--NLPNLKTLDLRDC 110
LDLS L + NL NL+ LDLSG +L L L+ NL NL+ L L +C
Sbjct: 1104 LDLSGCSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSEC 1157
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCG--ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
+ NL NLK L+L C + + L NL+ L LS L + NL NL+ LDL
Sbjct: 928 IGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDL 987
Query: 86 SGNQNLTTLGLA--NLPNLKTLDLRDC 110
SG +L L L+ NL NLKTL+L +C
Sbjct: 988 SGCSSLVELPLSIGNLINLKTLNLSEC 1014
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCG--ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
+ NL NLKKLDL GC + + L NL+ L LS L + NL NL+ L+L
Sbjct: 880 IGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLKTLNL 939
Query: 86 SGNQNLTTL--GLANLPNLKTLDLRDC 110
S +L L + NL NL+ L L +C
Sbjct: 940 SECSSLVELPSSIGNLINLQELYLSEC 966
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 28 LANLTNLKKLDLDGCG-----ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQV 82
+ N TN+K LD+ GC ++I L L L+ + SS L S + NL NL
Sbjct: 736 IGNATNIKSLDIQGCSSLLKLPSSIGNLITLPRLDLMGCSSLVELPSS---IGNLINLPR 792
Query: 83 LDLSGNQNLTTL--GLANLPNLKTLDLRDC 110
LDL G +L L + NL NL+ C
Sbjct: 793 LDLMGCSSLVELPSSIGNLINLEAFYFHGC 822
>gi|255732864|ref|XP_002551355.1| predicted protein [Candida tropicalis MYA-3404]
gi|240131096|gb|EER30657.1| predicted protein [Candida tropicalis MYA-3404]
Length = 1276
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKK------LDLDGCGITTIQGLAKLK 54
L+N R + S +++T +L L +TNL + L L I+ + GL +
Sbjct: 869 LSNNRIEGITPFSDYHDLTELNLDNNQLTVVTNLSQNIHLTSLSLHNNKISNLSGLGEFF 928
Query: 55 NLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL 107
NL L+LS N NL NL++LDLS N GL++LP LK L+L
Sbjct: 929 NLRVLNLSENEIQGKVNFNDVNLPNLEMLDLSNNHIQHITGLSHLPKLKVLEL 981
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 29/126 (23%)
Query: 26 LGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
L ++NL L+ L +D I+ + G+ KLK L+ + S ++ L N++ LDL
Sbjct: 1009 LDVSNLPLLRCLKIDQNVISEVDGIKKLKALDEISCKSQESSETLVKILYGCENVKKLDL 1068
Query: 86 SGNQNL------------------TTLGLANL-----------PNLKTLDLRDCGITTIQ 116
SGN++ TL NL PN++ L+L +T +
Sbjct: 1069 SGNRHFFNIIPKSKFMSNFPYVTHLTLSAMNLESIPNDLALKFPNVQNLNLSFNKLTDLS 1128
Query: 117 GIQQFT 122
G++ FT
Sbjct: 1129 GLENFT 1134
>gi|441473145|emb|CCQ22899.1| Internalin-A [Listeria monocytogenes N53-1]
Length = 455
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L +G LA+L NL LDL + I+ + + T
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT + L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVT---DLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSNK-VSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|313232818|emb|CBY09501.1| unnamed protein product [Oikopleura dioica]
Length = 347
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY 66
L++LDLS N NI + NLT L+KL L G I+ I+ + L +L ++L +N
Sbjct: 131 LEILDLSYN-NIRKIE----NIENLTKLRKLFLAGNKISKIENIETLTSLTMIELGANRI 185
Query: 67 LHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
+E L + LQ L L N+ L P L +DL++C I I G+ Q T
Sbjct: 186 --RKIENLETIKGLQELYLGKNKIAKMENLDVCPELSLVDLQNCRILEIDGLDQLT 239
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 37 LDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLT---NLQVLDLSGNQNLTT 93
+DL C I I GL +L NL +L L+ H + + NL +L +DLSGN +
Sbjct: 222 VDLQNCRILEIDGLDQLTNLTSLHLA-----HNGITEIKNLEKNLDLDTIDLSGNPIKSL 276
Query: 94 LGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
GL L +L+ L + DC I + +++ T+
Sbjct: 277 AGLDGLDHLEDLWMNDCKIEDWKEVEKLTA 306
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
+ ++ L+ L L LDL N +EG+ L NL++LDLS N + NL L+
Sbjct: 97 VRRMENLSMLTTLTELDLYDNIL--KKIEGIETLVNLEILDLSYNNIRKIENIENLTKLR 154
Query: 104 TLDLRDCGITTIQGIQQFTS 123
L L I+ I+ I+ TS
Sbjct: 155 KLFLAGNKISKIENIETLTS 174
>gi|229114149|ref|ZP_04243570.1| hypothetical protein bcere0017_4510 [Bacillus cereus Rock1-3]
gi|228669169|gb|EEL24590.1| hypothetical protein bcere0017_4510 [Bacillus cereus Rock1-3]
Length = 1006
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL ++TNL+KL L +T I ++KL++L+ +DL+SN ++ + L N+ +L L
Sbjct: 225 GLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPI--KNIHPIEQLENINMLFLR 282
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQ 116
N+ L+ + +KTLDL I IQ
Sbjct: 283 DNKISDLTPLSKMKKIKTLDLVGNNIEDIQ 312
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+ L L+G G+ I+ ++ LK L +++S N + L++L NLQ L+L+
Sbjct: 573 GLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSHNQI--EDITPLSSLKNLQWLNLA 630
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
N + ++ +L +L+L I ++ + Q +
Sbjct: 631 DNHIKDVTVIGSMLDLLSLNLAGNEICDVRPLIQLGQW 668
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
++ ++NL +L++ I I L+KL L+ L+L NY + L+NLT+L ++L
Sbjct: 358 ISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYI--SDISPLSNLTDLHEMNLGA 415
Query: 88 NQ 89
N+
Sbjct: 416 NE 417
>gi|328708332|ref|XP_003243660.1| PREDICTED: leucine-rich repeat-containing protein 4B-like
[Acyrthosiphon pisum]
Length = 597
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 1 LANLRYLQVLDLSAN--YNITS-GSLTRLG--------------LANLTNLKKLDLDGCG 43
LA LR LQ L+L N +I S +LT+L LA+LT L+ LDL
Sbjct: 104 LAYLRELQFLNLDNNKIRDIESLANLTQLAILYLYRNNIMDIKSLAHLTKLETLDLSYNE 163
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN--QNLTTLGLANLPN 101
I I+ LA L LE LDLS+N ANL+ LQ L L N +N+ T NL +
Sbjct: 164 IMDIESLAHLTELETLDLSNNNISELKHGAFANLSKLQSLFLYTNKIENIETGVFNNLTS 223
Query: 102 LKTLDLRDCGI 112
L++L L D I
Sbjct: 224 LESLSLHDNSI 234
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
LA L L+ L+LD I I+ LA L L L L N + ++ LA+LT L+ LDLS
Sbjct: 103 SLAYLRELQFLNLDNNKIRDIESLANLTQLAILYLYRNNIM--DIKSLAHLTKLETLDLS 160
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQ 116
N+ + LA+L L+TLDL + I+ ++
Sbjct: 161 YNEIMDIESLAHLTELETLDLSNNNISELK 190
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRL-------------------GLANLTNLKKLDL 39
+NL LQ+LDL N I S T L AN + L+ LDL
Sbjct: 266 FSNLPKLQILDLQNNKISGIERESFTYLTKLETLILSNNNISEVQNGAFANFSKLQSLDL 325
Query: 40 DGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLA 97
I I+ L+ L LE L+LS+N NL LQ L LSGN+ N+ T
Sbjct: 326 SYNFIMDIESLSHLTELETLNLSNNNISEVKNGAFTNLWKLQALFLSGNKIDNIETGAFN 385
Query: 98 NLPNLKTL 105
NL +L+ L
Sbjct: 386 NLTSLRAL 393
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
I+ I+ LA L+ L+ L+L +N +E LANLT L +L L N + LA+L L+
Sbjct: 98 ISDIESLAYLRELQFLNLDNNKI--RDIESLANLTQLAILYLYRNNIMDIKSLAHLTKLE 155
Query: 104 TLDLRDCGITTIQGIQQFTS 123
TLDL I I+ + T
Sbjct: 156 TLDLSYNEIMDIESLAHLTE 175
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 5/116 (4%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQ--GLAKLKNLEALDL 61
L L+ L LS N NIT + +NL L+ LDL I+ I+ L LE L L
Sbjct: 245 LTRLEKLTLSNN-NITE--VKNRVFSNLPKLQILDLQNNKISGIERESFTYLTKLETLIL 301
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQG 117
S+N AN + LQ LDLS N + L++L L+TL+L + I+ ++
Sbjct: 302 SNNNISEVQNGAFANFSKLQSLDLSYNFIMDIESLSHLTELETLNLSNNNISEVKN 357
>gi|12597786|gb|AAG60098.1|AC073178_9 disease resistance protein, putative [Arabidopsis thaliana]
Length = 1398
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG--ITTIQGLAKLKNLEA 58
+ NL L+ LDLS ++ L+ + NL NLK L+L C + + L NL+
Sbjct: 974 IGNLINLKKLDLSGCSSLVELPLS---IGNLINLKTLNLSECSSLVELPSSIGNLINLQE 1030
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLA--NLPNLKTLDLRDC 110
L LS L + NL NL+ LDLSG +L L L+ NL NLKTL+L C
Sbjct: 1031 LYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLKTLNLSGC 1084
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG--ITTIQGLAKLKNLEA 58
+ NL L+ LDLS ++ L+ + NL NLK L+L GC + + L NL+
Sbjct: 1046 IGNLINLKKLDLSGCSSLVELPLS---IGNLINLKTLNLSGCSSLVELPSSIGNL-NLKK 1101
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLA--NLPNLKTLDLRDC 110
LDLS L + NL NL+ LDLSG +L L L+ NL NL+ L L +C
Sbjct: 1102 LDLSGCSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSEC 1155
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCG--ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
+ NL NLK L+L C + + L NL+ L LS L + NL NL+ LDL
Sbjct: 926 IGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDL 985
Query: 86 SGNQNLTTLGLA--NLPNLKTLDLRDC 110
SG +L L L+ NL NLKTL+L +C
Sbjct: 986 SGCSSLVELPLSIGNLINLKTLNLSEC 1012
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCG--ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
+ NL NLKKLDL GC + + L NL+ L LS L + NL NL+ L+L
Sbjct: 878 IGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLKTLNL 937
Query: 86 SGNQNLTTL--GLANLPNLKTLDLRDC 110
S +L L + NL NL+ L L +C
Sbjct: 938 SECSSLVELPSSIGNLINLQELYLSEC 964
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 28 LANLTNLKKLDLDGCG-----ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQV 82
+ N TN+K LD+ GC ++I L L L+ + SS L S + NL NL
Sbjct: 734 IGNATNIKSLDIQGCSSLLKLPSSIGNLITLPRLDLMGCSSLVELPSS---IGNLINLPR 790
Query: 83 LDLSGNQNLTTL--GLANLPNLKTLDLRDC 110
LDL G +L L + NL NL+ C
Sbjct: 791 LDLMGCSSLVELPSSIGNLINLEAFYFHGC 820
>gi|83629769|gb|ABC26546.1| internalin C2 [Listeria monocytogenes]
gi|83629783|gb|ABC26553.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL L+L N L L
Sbjct: 58 TATGKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGMQYLNNLIGLELKDNQITD--LTPL 115
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 116 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 156
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 137 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITDISPLAGLTNLQYL 190
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA+LPNL + L+D I+ +
Sbjct: 191 SIGNTQV--SDLTPLANLSKLTNLRADDNKISDISPLASLPNLIEVHLKDNQISDV 244
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 115 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 167
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L L N + LA LTNLQ L + Q LANL L L D I+ I
Sbjct: 168 LYLDLNQITD--ISPLAGLTNLQYLSIGNTQVSDLTPLANLSKLTNLRADDNKISDI 222
>gi|356561556|ref|XP_003549047.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
FLS2-like [Glycine max]
Length = 867
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 11/120 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI--QGLAKLKNLEA 58
L L+YL LDLS+NY + + + LG +L +L+ LDL G + L L NL+
Sbjct: 103 LLELKYLNRLDLSSNYFVLTPIPSFLG--SLESLRYLDLSLSGFMGLIPHQLGNLSNLQH 160
Query: 59 LDLSSNYYLH-GSLEGLANLTNLQVLDLSGNQNLTTLG-----LANLPNLKTLDLRDCGI 112
L+L NY L +L ++ L++ + LDLSG+ +L G L+ LP+L L L C I
Sbjct: 161 LNLGYNYALQIDNLNWISRLSSFEYLDLSGS-DLHKKGNWLQVLSALPSLSELHLESCQI 219
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 26/113 (23%)
Query: 2 ANLRYLQVLDLSAN-----------------------YNITSGSLTRLGLANLTNLKKLD 38
AN +LQVLDLS N N+ G + ++ +++L N+K LD
Sbjct: 229 ANFTHLQVLDLSINNLNQQIPSWLFNLSTALVQLDLHSNLLQGEIPQI-ISSLQNIKNLD 287
Query: 39 LDGCGIT--TIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
L ++ L +LK+LE L+LS+N + ANL++L+ L+L+ N+
Sbjct: 288 LQNNQLSGPLPDSLGQLKHLEVLNLSNNTFTCPIPSPFANLSSLRTLNLAHNR 340
>gi|189207166|ref|XP_001939917.1| protein phosphatase 1 regulatory subunit 7 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187976010|gb|EDU42636.1| protein phosphatase 1 regulatory subunit 7 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 314
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L+NLK L + + TI GL L NLE L +S N L L GL N TNL+V+D+S
Sbjct: 175 GLDTLSNLKILSIQSNRLRTITGLENLTNLEELHISHN--LLTELTGLDNNTNLRVIDIS 232
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
N GL +L +L +C ++ I++
Sbjct: 233 ANPIEHLSGLKSLKHLTEFWASNCKLSDYAEIER 266
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL LT L++L L IT I+GL L NL+ L + SN ++ GL NLTNL+ L +S
Sbjct: 153 GLETLTALEELWLGKNKITEIKGLDTLSNLKILSIQSNRL--RTITGLENLTNLEELHIS 210
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
N GL N NL+ +D+ I + G++
Sbjct: 211 HNLLTELTGLDNNTNLRVIDISANPIEHLSGLK 243
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L L+NL++++L + IQGL L LE L L N ++GL L+NL++L +
Sbjct: 132 LEGLSNLRQIELGANRVREIQGLETLTALEELWLGKNKI--TEIKGLDTLSNLKILSIQS 189
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
N+ T GL NL NL+ L + +T + G+
Sbjct: 190 NRLRTITGLENLTNLEELHISHNLLTELTGL 220
>gi|47091397|ref|ZP_00229194.1| internalin C2 [Listeria monocytogenes str. 4b H7858]
gi|417314311|ref|ZP_12101012.1| internalin H (LPXTG motif) [Listeria monocytogenes J1816]
gi|47020074|gb|EAL10810.1| internalin C2 [Listeria monocytogenes str. 4b H7858]
gi|328467872|gb|EGF38912.1| internalin H (LPXTG motif) [Listeria monocytogenes J1816]
Length = 548
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL L+L N L L
Sbjct: 59 TATGKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGMQYLNNLIGLELKDNQITD--LTPL 116
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 117 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 157
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 138 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITDISPLAGLTNLQYL 191
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA+LPNL + L+D I+ +
Sbjct: 192 SIGNTQV--SDLTPLANLSKLTNLRADDNKISDISPLASLPNLIEVHLKDNQISDV 245
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 116 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 168
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L L N + LA LTNLQ L + Q LANL L L D I+ I
Sbjct: 169 LYLDLNQITD--ISPLAGLTNLQYLSIGNTQVSDLTPLANLSKLTNLRADDNKISDI 223
>gi|255017381|ref|ZP_05289507.1| internalin D [Listeria monocytogenes FSL F2-515]
Length = 352
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G+ L NL L L+ ITT+ LA L L L+ S+N + L+N+TNL L L
Sbjct: 91 GVQYLNNLDTLVLNNNKITTLNPLAGLTKLSILEASNNQL--SDISALSNVTNLHQLRLD 148
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
GNQ G++NL NL+T++L + IT I +
Sbjct: 149 GNQIKQLNGVSNLINLETIELSNNQITAISPV 180
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 66/141 (46%), Gaps = 29/141 (20%)
Query: 8 QVLDLSANYNITSGSLTRL---------GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
Q+ D+SA N+T+ RL G++NL NL+ ++L IT I ++ LKNL
Sbjct: 129 QLSDISALSNVTNLHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVG 188
Query: 59 L--------DLSS-------NYYLHGS-----LEGLANLTNLQVLDLSGNQNLTTLGLAN 98
L DLS N+ S L L+NL ++V+ L GNQ +AN
Sbjct: 189 LGIDNNKISDLSPISGLSKLNHLTADSNQISDLRPLSNLAAMEVMRLDGNQISDVTPIAN 248
Query: 99 LPNLKTLDLRDCGITTIQGIQ 119
L NL + L + I+ I +Q
Sbjct: 249 LANLNYVFLAENQISDISSLQ 269
>gi|255024787|ref|ZP_05296773.1| internalin A [Listeria monocytogenes FSL J1-208]
Length = 200
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 27 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 84
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L +G LA+L NL LDL + I+ + + T
Sbjct: 85 NQ-LKDIGTLASLTNLTDLDLANNQISNLAPLSGLT 119
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 27 LANLTTLERLDISSNK-VSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 81
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 82 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 125
>gi|423543966|ref|ZP_17520324.1| hypothetical protein IGO_00401, partial [Bacillus cereus HuB5-5]
gi|401185670|gb|EJQ92762.1| hypothetical protein IGO_00401, partial [Bacillus cereus HuB5-5]
Length = 799
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL ++TNL+KL L +T I ++KL++L+ +DL+SN ++ + L N+ +L L
Sbjct: 236 GLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPI--KNIHPIEQLENINMLFLR 293
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQ 116
N+ L+ + +KTLDL I IQ
Sbjct: 294 DNKISDLTPLSKMKKIKTLDLVGNNIEDIQ 323
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+ L L+G G+ I+ ++ LK L +++S N + L++L NLQ L+L+
Sbjct: 584 GLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSHNQI--EDITPLSSLKNLQWLNLA 641
Query: 87 GN--QNLTTLG 95
N +++T +G
Sbjct: 642 DNHIKDVTVIG 652
Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
++ ++NL +L++ I I L+KL L+ L+L NY + L+NLT+L ++L
Sbjct: 368 SISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYI--SDISPLSNLTDLHEMNLG 425
Query: 87 GNQ 89
N+
Sbjct: 426 ANE 428
>gi|423381480|ref|ZP_17358764.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG1O-2]
gi|401629741|gb|EJS47553.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG1O-2]
Length = 1003
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL ++TNL+KL L +T I ++KL++L+ +DL+SN ++ + L N+ +L L
Sbjct: 236 GLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPI--KNIHPIEQLENINMLFLR 293
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQ 116
N+ L+ + +KTLDL I IQ
Sbjct: 294 DNKISDLTPLSKMKKIKTLDLVGNNIEDIQ 323
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+ L L+G G+ I+ ++ LK L +++S N + L++L NLQ L+L+
Sbjct: 584 GLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSHNQI--EDITPLSSLKNLQWLNLA 641
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
N + ++ +L +L+L I ++ + Q +
Sbjct: 642 DNHIKDVTVIGSMLDLLSLNLAGNEICDVRPLIQLGQW 679
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
++ ++NL +L++ I I L+KL L+ L+L NY + L+NLT+L ++L
Sbjct: 369 ISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYI--SDISPLSNLTDLHEMNLGA 426
Query: 88 NQ 89
N+
Sbjct: 427 NE 428
>gi|298360020|gb|ADI77589.1| truncated internalin A [Listeria monocytogenes]
gi|298360528|gb|ADI77843.1| truncated internalin A [Listeria monocytogenes]
Length = 459
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L +G LA+L NL LDL + I+ + + T
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVT---DLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSNK-VSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|887862|gb|AAA69530.1| internalin, partial [Listeria monocytogenes]
Length = 344
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 129 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 186
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L +G LA+L NL LDL + I+ + + T
Sbjct: 187 NQ-LKDIGTLASLTNLTDLDLANNQISNLAPLPGLT 221
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LT+LQ L L G
Sbjct: 64 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSL-G 120
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 121 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 155
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L L + L+ LANLT L+ LD+S
Sbjct: 86 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSLGNQVT---DLKPLANLTTLERLDISS 142
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 143 NKVSDISVLAKLTNLESL 160
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 129 LANLTTLERLDISSNK-VSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 183
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L+ N + LA+LTNL LDL+ NQ LA LP L L G I I
Sbjct: 184 LNGNQL--KDIGTLASLTNLTDLDLANNQ---ISNLAPLPGLTKLTELKLGANQISNI 236
>gi|46447568|ref|YP_008933.1| hypothetical protein pc1934 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401209|emb|CAF24658.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 261
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L LQ LDLS N+T L L LT L+ L L GC T GLA L L AL
Sbjct: 97 LTPLTSLQHLDLSNCMNLTDDGLVHL--TPLTALQHLVLSGCDNLTDAGLAHLTPLTALQ 154
Query: 61 -LSSNYYLHG----SLEGLANLTNLQVLDLSGNQNLTTLGLANLPN---LKTLDLRDCGI 112
L + L LA LT LQ LDLS +NL GLA+L L+TL L+ C
Sbjct: 155 TLGLRRWCQNLTGDGLAHLAPLTALQTLDLSYCKNLKDAGLAHLTPLTALQTLGLKWCSK 214
Query: 113 TTIQGIQQF 121
T G+
Sbjct: 215 LTDAGLAHL 223
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 43/104 (41%), Gaps = 23/104 (22%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LA L LQ LDLS N+ L L LT L+ L L C T GLA LK L AL
Sbjct: 173 LAPLTALQTLDLSYCKNLKDAGLAHL--TPLTALQTLGLKWCSKLTDAGLAHLKPLAAL- 229
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKT 104
Q LDLS ++LT GLA L T
Sbjct: 230 --------------------QHLDLSHCRSLTDAGLARFKILAT 253
>gi|357502385|ref|XP_003621481.1| Receptor-like protein kinase [Medicago truncatula]
gi|355496496|gb|AES77699.1| Receptor-like protein kinase [Medicago truncatula]
Length = 926
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 10 LDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI--QGLAKLKNLEALDLSSNYYL 67
LDLS+N I G + ++ ++NL NLK L+L G ++ L +LK+LE LDLS N +
Sbjct: 258 LDLSSN--ILQGEIPQI-ISNLQNLKTLELQGNQLSGALPDSLGRLKHLEVLDLSKNTIV 314
Query: 68 HGSLEGLANLTNLQVLDLSGNQ 89
H +NL++L+ L+L NQ
Sbjct: 315 HSIPTSFSNLSSLRTLNLGHNQ 336
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI--TTIQGLAKLKNLEA 58
L L++L+VLDLS N + S +NL++L+ L+L + T + L L+NL+
Sbjct: 297 LGRLKHLEVLDLSKNTIVHS---IPTSFSNLSSLRTLNLGHNQLNGTIPKSLGFLRNLQV 353
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
L+L +N G L L+NL LDLS N
Sbjct: 354 LNLGANSLTGGIPATLGILSNLVTLDLSFN 383
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI--QGLAKLKNLEA 58
L L+YL LDLS NY + + + G ++ L LDL G + L L NL+
Sbjct: 99 LLELKYLIRLDLSLNYFVHTKIPSFFG--SMERLTYLDLSYSGFMGLIPHQLGNLSNLKY 156
Query: 59 LDLSSNYYLH-GSLEGLANLTNLQVLDLSG 87
L+L NY L +L+ + L +L+ LDLSG
Sbjct: 157 LNLGYNYALQIDNLDWITKLPSLEHLDLSG 186
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 39 LDGCGITTIQGLAK--LKNLEALDLSSNYYLHGSLEGLANL-TNLQVLDLSGN--QNLTT 93
L+ C + I+ K NL+ LDLS+N H L +NL T L LDLS N Q
Sbjct: 211 LENCQLDNIEATRKTNFTNLQVLDLSNNNLNHEILSWFSNLSTTLVQLDLSSNILQGEIP 270
Query: 94 LGLANLPNLKTLDLR 108
++NL NLKTL+L+
Sbjct: 271 QIISNLQNLKTLELQ 285
>gi|224112233|ref|XP_002332812.1| leucine rich repeat family protein with ABC domain [Populus
trichocarpa]
gi|222833206|gb|EEE71683.1| leucine rich repeat family protein with ABC domain [Populus
trichocarpa]
Length = 976
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 14/117 (11%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG----ITTIQGLAKLKNL 56
L NL YL + + + N +I + +T+LK L L+GC I T Q LKNL
Sbjct: 290 LKNLEYLDLSNTALNNSIFQA------IGTMTSLKTLILEGCSLNGQIPTTQDFLDLKNL 343
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSG----NQNLTTLGLANLPNLKTLDLRD 109
E LDLS+ + + + +T+L+ L L G Q TT GL +L +L+ LD+ D
Sbjct: 344 EYLDLSNTALNNSIFQAIGTMTSLKTLILEGCSLNGQIPTTQGLCDLNHLQELDVSD 400
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG----ITTIQGLAKLKNL 56
L NL YL + + + N +I + +T+LK L L+GC I T QGL L +L
Sbjct: 340 LKNLEYLDLSNTALNNSIFQA------IGTMTSLKTLILEGCSLNGQIPTTQGLCDLNHL 393
Query: 57 EALDLSSNYYLHGSLEG-LANLTNLQVLDLSGNQNLTTLGLANLPNLKTL 105
+ LD+S N L G L L NLT+LQ L LS N + L+ L NL L
Sbjct: 394 QELDVSDN-DLSGVLPSCLPNLTSLQQLSLSYNHLKIPMSLSPLYNLSKL 442
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 28 LANLTNLKKLDLDGCGI--TTIQGLAKLKNLEALDLSSNYYLHGSLEG--LANLTNLQVL 83
L NL++LK L LDGC + ++Q L L +L+ L L L+G++ +L NL+ L
Sbjct: 240 LQNLSSLKMLYLDGCSLDEHSLQSLGALSSLKNLSLQE---LNGTVPSGDFLDLKNLEYL 296
Query: 84 DLSGN--QNLTTLGLANLPNLKTLDLRDCGIT-TIQGIQQF 121
DLS N + + +LKTL L C + I Q F
Sbjct: 297 DLSNTALNNSIFQAIGTMTSLKTLILEGCSLNGQIPTTQDF 337
>gi|145687803|gb|ABP88874.1| truncated internalin A precursor [Listeria monocytogenes]
gi|145687809|gb|ABP88877.1| truncated internalin A precursor [Listeria monocytogenes]
gi|194326155|emb|CAQ77236.1| internalin A [Listeria monocytogenes]
gi|294358379|gb|ADE73842.1| truncated InlA [Listeria monocytogenes]
gi|294358381|gb|ADE73843.1| truncated InlA [Listeria monocytogenes]
gi|294358383|gb|ADE73844.1| truncated InlA [Listeria monocytogenes]
gi|294358385|gb|ADE73845.1| truncated InlA [Listeria monocytogenes]
gi|298359890|gb|ADI77524.1| truncated internalin A [Listeria monocytogenes]
gi|298359938|gb|ADI77548.1| truncated internalin A [Listeria monocytogenes]
gi|298359960|gb|ADI77559.1| truncated internalin A [Listeria monocytogenes]
gi|298360012|gb|ADI77585.1| truncated internalin A [Listeria monocytogenes]
gi|371942072|gb|AEX60848.1| truncated internaline [Listeria monocytogenes]
gi|371942094|gb|AEX60859.1| truncated internaline [Listeria monocytogenes]
gi|371942120|gb|AEX60872.1| truncated internaline [Listeria monocytogenes]
gi|371942130|gb|AEX60877.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L +G LA+L NL LDL + I+ + + T
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT + L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVT---DLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSNK-VSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|386052545|ref|YP_005970103.1| internalin E [Listeria monocytogenes Finland 1998]
gi|346645196|gb|AEO37821.1| internalin E [Listeria monocytogenes Finland 1998]
gi|441469815|emb|CCQ19570.1| Internalin-A [Listeria monocytogenes]
gi|441472952|emb|CCQ22706.1| Internalin-A [Listeria monocytogenes N53-1]
Length = 499
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T LG A++T+ + + DLD GITTI+GL L NL L+L N L L
Sbjct: 57 TLLGKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTD--LNPL 114
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L LSGN LA L NLKT+DL IT +
Sbjct: 115 TNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDV 155
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 8 QVLDLSANYNITSGSLTRL---------GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
QV DL+ N+T + RL LA L NLK +DL IT + LA L NL+
Sbjct: 107 QVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQV 166
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L+L N + LA L+NLQ L Q LANL L TL+ + ++ + +
Sbjct: 167 LNLDINQITD--ITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPL 224
>gi|350535018|ref|NP_001234427.1| EIX receptor 1 precursor [Solanum lycopersicum]
gi|39577520|gb|AAR28377.1| EIX receptor 1 [Solanum lycopersicum]
Length = 1031
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Query: 6 YLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI--TTIQGLAKLKNLEALDLSS 63
YL+ +DLS+N I G + + +A++ LK L+L + T I+G+ +++ LE+LD+S
Sbjct: 825 YLKTIDLSSNELI--GGVPK-EIADMRGLKSLNLSRNELNGTVIEGIGQMRMLESLDMSR 881
Query: 64 NYYLHGSLEGLANLTNLQVLDLSGNQ 89
N + LANLT L VLDLS NQ
Sbjct: 882 NQLSGVIPQDLANLTFLSVLDLSNNQ 907
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNLEALDLSSN 64
L+ LDLS N G+L L L +L++L L QG+ KL L LD+SSN
Sbjct: 396 LEYLDLSENQ--MRGALPDLAL--FPSLRELHLGSNQFRGRIPQGIGKLSQLRILDVSSN 451
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQ---NLTTLGLANLPNLKTLDL 107
L G E + L+NL+ D S N +T L+NL +L LDL
Sbjct: 452 -RLEGLPESMGQLSNLESFDASYNVLKGTITESHLSNLSSLVDLDL 496
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 60/139 (43%), Gaps = 36/139 (25%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKL------- 53
L YL+ LDL+ N I G + G NLT L+ LD+ T+Q L +L
Sbjct: 290 FGTLMYLEHLDLANNLKIEGGVPSSFG--NLTRLRHLDMS--NTQTVQWLPELFLRLSGS 345
Query: 54 -KNLEALDLSSNY----------------------YLHGS-LEGLANLTNLQVLDLSGNQ 89
K+LE L L+ N L+GS +E ++ L+ LDLS NQ
Sbjct: 346 RKSLEVLGLNENSLFGSIVNATRFSSLKKLYLQKNMLNGSFMESAGQVSTLEYLDLSENQ 405
Query: 90 NLTTLG-LANLPNLKTLDL 107
L LA P+L+ L L
Sbjct: 406 MRGALPDLALFPSLRELHL 424
>gi|83629907|gb|ABC26615.1| internalin E [Listeria monocytogenes]
gi|83629941|gb|ABC26632.1| internalin E [Listeria monocytogenes]
gi|83629951|gb|ABC26637.1| internalin E [Listeria monocytogenes]
gi|83629955|gb|ABC26639.1| internalin E [Listeria monocytogenes]
gi|83629957|gb|ABC26640.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T LG A++T+ + + DLD GITTI+GL L NL L+L N L L
Sbjct: 56 TLLGKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTD--LNPL 113
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L LSGN LA L NLKT+DL IT +
Sbjct: 114 TNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDV 154
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 8 QVLDLSANYNITSGSLTRL---------GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
QV DL+ N+T + RL LA L NLK +DL IT + LA L NL+
Sbjct: 106 QVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQV 165
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L+L N + LA L+NLQ L Q LANL L TL+ + ++ + +
Sbjct: 166 LNLDINQITD--ITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPL 223
>gi|83592173|ref|YP_425925.1| hypothetical protein Rru_A0837 [Rhodospirillum rubrum ATCC 11170]
gi|386348881|ref|YP_006047129.1| hypothetical protein F11_04310 [Rhodospirillum rubrum F11]
gi|83575087|gb|ABC21638.1| Leucine-rich repeat [Rhodospirillum rubrum ATCC 11170]
gi|346717317|gb|AEO47332.1| leucine-rich repeat-containing protein [Rhodospirillum rubrum F11]
Length = 1085
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L+ LQ LDL L +GL +L +L+ L+L +T + LA L+NL+ L
Sbjct: 222 LVGLKSLQSLDLRRTRVTDIAPL--VGLKSLKSLQSLNLSRTPVTDLAPLAGLENLQNLT 279
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL 107
LS Y L LA L NLQ +DL G + + LA L NL+ +DL
Sbjct: 280 LS--YTTVTDLAPLAGLENLQNIDLGGTEVIDLAPLAGLENLQNIDL 324
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LA L NL+ +DL G + + LA L+NL+ +DL + L LA L NLQ L LS
Sbjct: 291 LAGLENLQNIDLGGTEVIDLAPLAGLENLQNIDLGGTEVI--DLAPLAGLENLQNLTLSY 348
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTI 115
LA L NL+++D C IT++
Sbjct: 349 TTVTDLAPLAGLENLQSIDCSGCRITSV 376
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
LA L+ LQ ++LSA +T L LA L NL+ L L +T + LA L+NL+ L
Sbjct: 134 LAGLKNLQSINLSAT------QITDLAPLAGLENLQNLTLSYTTVTDLAPLAGLENLQHL 187
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L + L LA L +LQ LDLSG + L L +L++LDLR +T I
Sbjct: 188 ILLGTRVI--DLTPLAGLKSLQSLDLSGTRVTNIAPLVGLKSLQSLDLRRTRVTDI 241
>gi|423542724|ref|ZP_17519113.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB4-10]
gi|401168220|gb|EJQ75487.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB4-10]
Length = 964
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL ++TNL+KL L +T I ++KL++L+ +DL+SN ++ + L N+ +L L
Sbjct: 225 GLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPI--KNIHPIEQLENINMLFLR 282
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQ 116
N+ L+ + +KTLDL I IQ
Sbjct: 283 DNKISDLTPLSKMKKIKTLDLVGNNIEDIQ 312
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+ L L+G G+ I+ ++ LK L +++S N + L++L NLQ L+L+
Sbjct: 573 GLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSHNQI--EDITPLSSLKNLQWLNLA 630
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
N + ++ +L +L+L I ++ + Q +
Sbjct: 631 DNHIKDVTVIGSMLDLLSLNLAGNEICDVRPLIQLGQW 668
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
++ ++NL +L++ I I L+KL L+ L+L NY + L+NLT+L ++L
Sbjct: 358 ISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYI--SDISPLSNLTDLHEMNLGA 415
Query: 88 NQ 89
N+
Sbjct: 416 NE 417
>gi|423450497|ref|ZP_17427375.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG5O-1]
gi|401124882|gb|EJQ32643.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG5O-1]
Length = 975
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL ++TNL+KL L +T I ++KL++L+ +DL+SN ++ + L N+ +L L
Sbjct: 236 GLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPI--KNIHPIEQLENINMLFLR 293
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQ 116
N+ L+ + +KTLDL I IQ
Sbjct: 294 DNKISDLTPLSKMKKIKTLDLVGNNIEDIQ 323
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+ L L+G G+ I+ ++ LK L +++S N + L++L NLQ L+L+
Sbjct: 584 GLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSHNQI--EDITPLSSLKNLQWLNLA 641
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
N + ++ +L +L+L I ++ + Q +
Sbjct: 642 DNHIKDVTVIGSMLDLLSLNLAGNEICDVRPLIQLGQW 679
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
++ ++NL +L++ I I L+KL L+ L+L NY + L+NLT+L ++L
Sbjct: 369 ISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYI--SDISPLSNLTDLHEMNLGA 426
Query: 88 NQ 89
N+
Sbjct: 427 NE 428
>gi|371942108|gb|AEX60866.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L +G LA+L NL LDL + I+ + + T
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT + L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVT---DLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSNK-VSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|371942086|gb|AEX60855.1| truncated internaline [Listeria monocytogenes]
gi|371942128|gb|AEX60876.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L +G LA+L NL LDL + I+ + + T
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT + L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVT---DLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSNK-VSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|363808372|ref|NP_001242512.1| uncharacterized protein LOC100782492 [Glycine max]
gi|255642039|gb|ACU21286.1| unknown [Glycine max]
Length = 330
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 25 RLGLANLTNLK---KLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQ 81
R+ + NL LK K+ +T++ G LE L LS N +EGL++L NL+
Sbjct: 189 RIKVVNLCGLKCIKKISFQSNRLTSMTGFEGCVALEELYLSHNGI--AKMEGLSSLVNLR 246
Query: 82 VLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
VLD+S N+ + + NL L+ L L D I +++GI + S
Sbjct: 247 VLDVSSNKITSVDDIVNLTKLEDLWLNDNQIASLEGIAEAVS 288
>gi|150371828|dbj|BAF65703.1| internalin A [Listeria monocytogenes]
Length = 526
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L +G LA+L NL LDL + I+ + + T
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVT---DLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|56797879|emb|CAH04901.1| internalin A [Listeria monocytogenes]
Length = 483
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 195 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 252
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L +G LA+L NL LDL + I+ + + T
Sbjct: 253 NQ-LKDIGTLASLTNLTDLDLANNQISNLAPLSGLT 287
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 130 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 186
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 187 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 221
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 152 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVT---DLKPLANLTTLERLDISS 208
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 209 NKVSDISVLAKLTNLESL 226
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 195 LANLTTLERLDISSNK-VSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 249
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 250 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 293
>gi|432926578|ref|XP_004080897.1| PREDICTED: leucine-rich repeat-containing protein 31-like [Oryzias
latipes]
Length = 533
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 68/126 (53%), Gaps = 15/126 (11%)
Query: 1 LANLRYLQVLDLSANYNITSG-SLTRLGLANLTNLKKLDLDGCGITT------IQGLAKL 53
L +L L+ LDLS N +++ G S LA++ +L+ LDL C +T IQ L L
Sbjct: 252 LCSLPSLRELDLSCNKHLSGGLSHLTFHLAHVAHLESLDLHLCALTRADLEALIQALPTL 311
Query: 54 KNLEALDLSSNYYLHGSLEGLAN---LTNLQVLDLS----GNQNLTTLGLANLPNLKTLD 106
L LDLSSN + G + L + LT ++ L L+ ++ T L LA +P+L+++D
Sbjct: 312 TALTQLDLSSNMEVGGVVHPLVSSLPLTQMRRLPLNSCSLSQESFTALTLA-VPHLRSVD 370
Query: 107 LRDCGI 112
+ C +
Sbjct: 371 VSWCKV 376
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 52/125 (41%), Gaps = 30/125 (24%)
Query: 1 LANLRYLQVLDLSANYNITSGS------LTRLGLANLTNLKKLDLDGCGITT------IQ 48
+A L L VLD+S N ++ S L+ T L L L CG+T
Sbjct: 191 VATLPRLCVLDVSCNPQLSEDSNGVGFRQFAAALSKATPLTTLRLQACGLTADSLAALSA 250
Query: 49 GLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLR 108
L L +L LDLS N +L G L L T LA++ +L++LDL
Sbjct: 251 SLCSLPSLRELDLSCNKHLSGGLSHL------------------TFHLAHVAHLESLDLH 292
Query: 109 DCGIT 113
C +T
Sbjct: 293 LCALT 297
>gi|371942144|gb|AEX60884.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L +G LA+L NL LDL + I+ + + T
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVT---DLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSNK-VSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|219128292|ref|XP_002184350.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404151|gb|EEC44099.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 540
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Query: 4 LRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQ-----GLAKLKNLEA 58
LR LQ+LDL N+ G+ L NLTNL++L L TI L++L L+
Sbjct: 267 LRALQILDLYNNHVYNVGAAGNDWLGNLTNLEQLFLGKSPFVTIDEGIPTALSRLSKLQD 326
Query: 59 LDLSSNYYLHGSLEG--LANLTNLQVLDLSGNQNLTTLGL--ANLPNLKTL 105
LD+S Y G+L+ N +L L + GN ++L L ANLP+LK L
Sbjct: 327 LDVSYTLY-RGALQPSLFRNWPDLVYLKMGGNSYNSSLPLAQANLPSLKYL 376
>gi|254932488|ref|ZP_05265847.1| InlC2 [Listeria monocytogenes HPB2262]
gi|405748612|ref|YP_006672078.1| internalin C2 [Listeria monocytogenes ATCC 19117]
gi|417316568|ref|ZP_12103212.1| internalin H (LPXTG motif) [Listeria monocytogenes J1-220]
gi|424821999|ref|ZP_18247012.1| Internalin D [Listeria monocytogenes str. Scott A]
gi|126143311|gb|ABN80098.1| InlC2 [Listeria monocytogenes]
gi|293584044|gb|EFF96076.1| InlC2 [Listeria monocytogenes HPB2262]
gi|328476103|gb|EGF46812.1| internalin H (LPXTG motif) [Listeria monocytogenes J1-220]
gi|332310679|gb|EGJ23774.1| Internalin D [Listeria monocytogenes str. Scott A]
gi|404217812|emb|CBY69176.1| internalin C2 (LPXTG motif) [Listeria monocytogenes ATCC 19117]
Length = 548
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL L+L N L L
Sbjct: 59 TATGKSNVTDTVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITD--LTPL 116
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 117 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 157
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 116 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVAPLAGLSNLQV 168
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L L N L LA LTNLQ L + NQ LANL L TL D I+ I
Sbjct: 169 LYLDLNQITD--LSPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDI 223
>gi|83629787|gb|ABC26555.1| internalin C2 [Listeria monocytogenes]
gi|83629789|gb|ABC26556.1| internalin C2 [Listeria monocytogenes]
gi|83629795|gb|ABC26559.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL L+L N L L
Sbjct: 58 TATGKSNVTDAVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITD--LTPL 115
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 116 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 156
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 115 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVAPLAGLSNLQV 167
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L L N L LA LTNLQ L + NQ LANL L TL D I+ I
Sbjct: 168 LYLDLNQITD--LSPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDI 222
>gi|398406178|ref|XP_003854555.1| hypothetical protein MYCGRDRAFT_99443 [Zymoseptoria tritici IPO323]
gi|339474438|gb|EGP89531.1| hypothetical protein MYCGRDRAFT_99443 [Zymoseptoria tritici IPO323]
Length = 352
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L ++++++ L + ++++ L LTNL L+L I I+GL L LE+L
Sbjct: 140 LKHIKHVETLKKLHHIYFVQNRISKIENLEELTNLTYLELGANRIREIEGLETLTKLESL 199
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTIQGI 118
L N L+GL+ LTNL+ L + N+ LT+L G+ +P L L + D IT+++ +
Sbjct: 200 WLGQNKI--TELKGLSTLTNLRTLSIQANR-LTSLDGIETIPQLTELYVSDNKITSLEPL 256
Query: 119 Q 119
+
Sbjct: 257 K 257
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL+ LTNL+ L + +T++ G+ + L L +S N SLE L N T L++LD
Sbjct: 211 GLSTLTNLRTLSIQANRLTSLDGIETIPQLTELYVSDNKI--TSLEPLKNNTKLEILDFQ 268
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
N GL L +L+ + +C I + +++
Sbjct: 269 TNPIKDLKGLEELNDLENVWASNCQIDSFHEVERV 303
>gi|224124658|ref|XP_002330078.1| predicted protein [Populus trichocarpa]
gi|222871503|gb|EEF08634.1| predicted protein [Populus trichocarpa]
Length = 1228
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL L + N NI S L+ + LK LDL T GL L+NLE L
Sbjct: 303 LRNLEELHLYSNKLNNNILSS------LSGFSTLKSLDLSYNKFTGSTGLKGLRNLEELY 356
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLR 108
L N + + L L+ + L+ LDLS N+ ++GL L NL+TL+L
Sbjct: 357 LGFNKFNNSILSSLSGFSTLKSLDLSNNKFTGSIGLKGLRNLETLNLE 404
>gi|198437403|ref|XP_002124871.1| PREDICTED: similar to soc-2 (suppressor of clear) homolog [Ciona
intestinalis]
Length = 954
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
NL+NL+ LDL +TT+ + +++L++L LD + N + E L + +LQ +DL
Sbjct: 263 SFGNLSNLRLLDLRENKLTTLPESMSRLEDLITLDCAGNQ-IKTIPEELKQIKSLQNIDL 321
Query: 86 SGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
S NQ + L+N+ NL T+DL I+T+ I+ S
Sbjct: 322 SANQIESVPTLSNMSNLVTVDLSRNAISTLGDIEDMPS 359
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 29/133 (21%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L ++ LQ +DLSAN I S L+N++NL +DL I+T+ + + ++E L+
Sbjct: 310 LKQIKSLQNIDLSANQ-IESVP----TLSNMSNLVTVDLSRNAISTLGDIEDMPSMENLN 364
Query: 61 LSSNYYLH-----GSLEGLA-----------------NLTNLQVLDLSGNQNLTTLGLAN 98
LS N G++E L NL++LQ +D+S NQ LT+L +
Sbjct: 365 LSENQLAKVPDSIGNIESLENFRLANNQIQELPQTIGNLSSLQFIDVSNNQ-LTSLNTS- 422
Query: 99 LPNLKTLDLRDCG 111
L L TL++ G
Sbjct: 423 LRRLGTLEILKAG 435
>gi|167861934|gb|ACA05666.1| InlA [Listeria monocytogenes]
gi|194326141|emb|CAQ77229.1| internalin A [Listeria monocytogenes]
Length = 538
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVT---DLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|329906145|ref|ZP_08274368.1| hypothetical protein IMCC9480_2835 [Oxalobacteraceae bacterium
IMCC9480]
gi|327547327|gb|EGF32161.1| hypothetical protein IMCC9480_2835 [Oxalobacteraceae bacterium
IMCC9480]
Length = 518
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
Query: 22 SLTRLGLANLTN---LKKLDLDGC-GIT--TIQGLAKLKNLEALDLSSNYYLHGS-LEGL 74
+LT GLA L L LDL C G+ + L + LE LDLS + G L
Sbjct: 373 ALTEPGLAQLATSPALVSLDLRSCRGVVGDALPALGRQTALETLDLSRCSGVTGDDLRHF 432
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANL---PNLKTLDLRDCGITTIQGIQQFTSY 124
+L+ LQ L L G + GLA+L P LKTLDL DCG T +++ +
Sbjct: 433 QSLSKLQTLRLVGCGRINDAGLAHLQALPALKTLDLTDCGYLTDGALRRIAHF 485
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT---IQGLAKLKNLE 57
+AN LQ L++S N+T L L L L+ L L+G + ++ ++ L+
Sbjct: 135 VANQANLQHLEISLRRNMTDDELA--SLRPLLQLRHLSLNGSSGFSGSGLEDWPQMPALQ 192
Query: 58 ALDLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLP---NLKTLDLRDCGIT 113
LDL++ + +L LA L +LQ L+LS Q LT G+A+LP L+ LDL C
Sbjct: 193 VLDLTACTTIAEANLVHLAKLPDLQQLNLSSCQQLTDAGVAHLPLASTLQHLDLSGCQQV 252
Query: 114 TIQGIQQFTS 123
T G++ ++
Sbjct: 253 TDAGLRGLSA 262
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT---IQGLAKLKNLE 57
LA L LQ L+LS+ +T + L LA + L+ LDL GC T ++GL+ L++L+
Sbjct: 210 LAKLPDLQQLNLSSCQQLTDAGVAHLPLA--STLQHLDLSGCQQVTDAGLRGLSALRSLQ 267
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGL---ANLPNLKTLDLRDC 110
LD+ S + G+ L + ++ L+ + + GL A + +L+ L++ C
Sbjct: 268 HLDVHSCRLVTGA--TLGDFAVMKSLNAGFCRRFSDAGLAAVAGMHDLQQLEITHC 321
>gi|167862030|gb|ACA05714.1| InlA [Listeria monocytogenes]
Length = 576
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNHITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVT---DLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|83629909|gb|ABC26616.1| internalin E [Listeria monocytogenes]
gi|83629919|gb|ABC26621.1| internalin E [Listeria monocytogenes]
gi|83629925|gb|ABC26624.1| internalin E [Listeria monocytogenes]
gi|83629945|gb|ABC26634.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T LG A++T+ + + DLD GITTI+GL L NL L+L N L L
Sbjct: 56 TLLGKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTD--LNPL 113
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L LSGN LA L NLKT+DL IT +
Sbjct: 114 TNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDV 154
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 8 QVLDLSANYNITSGSLTRL---------GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
QV DL+ N+T + RL LA L NLK +DL IT + LA L NL+
Sbjct: 106 QVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQV 165
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L+L N + LA L+NLQ L Q LANL L TL+ + ++ + +
Sbjct: 166 LNLDINQITD--ITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPL 223
>gi|405757422|ref|YP_006686698.1| internalin A protein InlA, N-terminal part, partial [Listeria
monocytogenes SLCC2479]
gi|145687805|gb|ABP88875.1| truncated internalin A precursor [Listeria monocytogenes]
gi|145687811|gb|ABP88878.1| truncated internalin A precursor [Listeria monocytogenes]
gi|145687813|gb|ABP88879.1| truncated internalin A precursor [Listeria monocytogenes]
gi|167861890|gb|ACA05644.1| InlA [Listeria monocytogenes]
gi|167861942|gb|ACA05670.1| InlA [Listeria monocytogenes]
gi|167861986|gb|ACA05692.1| InlA [Listeria monocytogenes]
gi|194326143|emb|CAQ77230.1| internalin A [Listeria monocytogenes]
gi|298359794|gb|ADI77476.1| truncated internalin A [Listeria monocytogenes]
gi|298359982|gb|ADI77570.1| truncated internalin A [Listeria monocytogenes]
gi|298360074|gb|ADI77616.1| truncated internalin A [Listeria monocytogenes]
gi|298360136|gb|ADI77647.1| truncated internalin A [Listeria monocytogenes]
gi|298360184|gb|ADI77671.1| truncated internalin A [Listeria monocytogenes]
gi|298360286|gb|ADI77722.1| truncated internalin A [Listeria monocytogenes]
gi|298360300|gb|ADI77729.1| truncated internalin A [Listeria monocytogenes]
gi|298360306|gb|ADI77732.1| truncated internalin A [Listeria monocytogenes]
gi|298360344|gb|ADI77751.1| truncated internalin A [Listeria monocytogenes]
gi|298360352|gb|ADI77755.1| truncated internalin A [Listeria monocytogenes]
gi|298360358|gb|ADI77758.1| truncated internalin A [Listeria monocytogenes]
gi|298360602|gb|ADI77880.1| truncated internalin A [Listeria monocytogenes]
gi|298360636|gb|ADI77897.1| truncated internalin A [Listeria monocytogenes]
gi|371942098|gb|AEX60861.1| truncated internaline [Listeria monocytogenes]
gi|371942122|gb|AEX60873.1| truncated internaline [Listeria monocytogenes]
gi|404235304|emb|CBY56706.1| similar to internalin A protein InlA, N-terminal part [Listeria
monocytogenes SLCC2479]
Length = 576
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVT---DLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|449671238|ref|XP_002157730.2| PREDICTED: leucine-rich repeat and coiled-coil domain-containing
protein 1-like [Hydra magnipapillata]
Length = 900
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 10/97 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L++L++L+ LDLS+N +T++ L ++L L+L IT ++GL L+NL +
Sbjct: 43 LSHLKFLKQLDLSSN------CITKISSLEQCSSLAVLNLSCNSITKVEGLEALRNLVHI 96
Query: 60 DLSSNYYLHGS-LEGLANLTN-LQVLDLSGNQNLTTL 94
DLS N H S LE T+ LQ LDL GN NLT+L
Sbjct: 97 DLSYNKISHISGLECFTEKTHRLQYLDLFGN-NLTSL 132
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 32 TNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL 91
+ L L L G I I+ L+ LK L+ LDLSSN + L ++L VL+LS N
Sbjct: 25 STLYCLSLHGNQIRQIENLSHLKFLKQLDLSSNCIT--KISSLEQCSSLAVLNLSCNSIT 82
Query: 92 TTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
GL L NL +DL I+ I G++ FT
Sbjct: 83 KVEGLEALRNLVHIDLSYNKISHISGLECFT 113
>gi|431802827|ref|YP_007229730.1| hypothetical protein B479_14465 [Pseudomonas putida HB3267]
gi|430793592|gb|AGA73787.1| hypothetical protein B479_14465 [Pseudomonas putida HB3267]
Length = 1275
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Query: 6 YLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY 65
+ V LS +YN + L NL +L L C T+ L ++L +DL N
Sbjct: 1018 FTHVQHLSLSYNRSLSQLPTGFYERFPNLNRLLLADCRFDTVPRLGNTEHLAWVDLEGNR 1077
Query: 66 YLHGSL--EGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI-QGIQQ 120
S + L + L VLDLSGN L L L L+TL L C ++ + QG+ Q
Sbjct: 1078 ITWSSQAQQALNRCSGLVVLDLSGNPLLQAPDLRGLAYLRTLFLNHCALSELPQGLDQ 1135
>gi|313485040|gb|ADR52996.1| InlA [Listeria monocytogenes]
Length = 491
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L +G LA+L NL LDL + I+ + + T
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVT---DLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSNK-VSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|223698748|gb|ACN19072.1| truncated internalin A [Listeria monocytogenes]
gi|223698961|gb|ACN19214.1| truncated internalin A [Listeria monocytogenes]
Length = 491
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 118 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 175
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L +G LA+L NL LDL + I+ + + T
Sbjct: 176 NQ-LKDIGTLASLTNLTDLDLANNQISNLAPLSGLT 210
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 53 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 109
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 110 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 144
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 75 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVT---DLKPLANLTTLERLDISS 131
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 132 NKVSDISVLAKLTNLESL 149
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 118 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 172
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 173 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 216
>gi|223698697|gb|ACN19038.1| truncated internalin A [Listeria monocytogenes]
gi|223698841|gb|ACN19134.1| truncated internalin A [Listeria monocytogenes]
gi|223698877|gb|ACN19158.1| truncated internalin A [Listeria monocytogenes]
gi|223698922|gb|ACN19188.1| truncated internalin A [Listeria monocytogenes]
Length = 406
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 118 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 175
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L +G LA+L NL LDL + I+ + + T
Sbjct: 176 NQ-LKDIGTLASLTNLTDLDLANNQISNLAPLSGLT 210
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT + L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 53 LANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 109
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 110 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 144
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 75 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVT---DLKPLANLTTLERLDISS 131
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 132 NKVSDISVLAKLTNLESL 149
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 118 LANLTTLERLDISSNK-VSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 172
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 173 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 216
>gi|146422801|ref|XP_001487335.1| hypothetical protein PGUG_00712 [Meyerozyma guilliermondii ATCC
6260]
gi|146388456|gb|EDK36614.1| hypothetical protein PGUG_00712 [Meyerozyma guilliermondii ATCC
6260]
Length = 374
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L++LTNL+ L + IT I+GL L NLE L LS N +E L N NLQVLD++
Sbjct: 236 LSSLTNLRVLSIQSNRITKIEGLEMLVNLEELYLSHNGI--AKIENLDNNKNLQVLDMTS 293
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
N+ LT+L NL +L L C I +Q
Sbjct: 294 NK-LTSLD--NLSHLTKLTDFWCSYNQISDFEQI 324
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 28 LANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L L +LK L+L G I I +GL +L++L L L N +H L+ L++LTNL+VL +
Sbjct: 191 LDTLKSLKNLELGGNKIEEINEGLHQLQSLTQLWLGKNR-IH-KLQNLSSLTNLRVLSIQ 248
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
N+ GL L NL+ L L GI I+ +
Sbjct: 249 SNRITKIEGLEMLVNLEELYLSHNGIAKIENL 280
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L NLR L +I S +T++ GL L NL++L L GI I+ L KNL+ L
Sbjct: 239 LTNLRVL---------SIQSNRITKIEGLEMLVNLEELYLSHNGIAKIENLDNNKNLQVL 289
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ----NLTTLGLANLPNLKTL 105
D++SN SL+ L++LT L S NQ L LP L T+
Sbjct: 290 DMTSNKL--TSLDNLSHLTKLTDFWCSYNQISDFEQIRRELGKLPELDTV 337
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L +L +L L I +Q L+ L NL L + SN +EGL L NL+ L LS
Sbjct: 213 GLHQLQSLTQLWLGKNRIHKLQNLSSLTNLRVLSIQSNRI--TKIEGLEMLVNLEELYLS 270
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N L N NL+ LD+ +T++ + T
Sbjct: 271 HNGIAKIENLDNNKNLQVLDMTSNKLTSLDNLSHLT 306
>gi|83629947|gb|ABC26635.1| internalin E [Listeria monocytogenes]
gi|83629949|gb|ABC26636.1| internalin E [Listeria monocytogenes]
gi|83629971|gb|ABC26647.1| internalin E [Listeria monocytogenes]
gi|83629973|gb|ABC26648.1| internalin E [Listeria monocytogenes]
gi|83629975|gb|ABC26649.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T LG A++T+ + + DLD GITTI+GL L NL L+L N L L
Sbjct: 56 TLLGKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTD--LNPL 113
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L LSGN LA L NLKT+DL IT +
Sbjct: 114 TNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDV 154
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 8 QVLDLSANYNITSGSLTRL---------GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
QV DL+ N+T + RL LA L NLK +DL IT + LA L NL+
Sbjct: 106 QVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQV 165
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L+L N + LA L+NLQ L Q LANL L TL+ + ++ + +
Sbjct: 166 LNLDINQITD--ITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPL 223
>gi|54294775|ref|YP_127190.1| hypothetical protein lpl1852 [Legionella pneumophila str. Lens]
gi|53754607|emb|CAH16091.1| hypothetical protein lpl1852 [Legionella pneumophila str. Lens]
Length = 553
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 15/111 (13%)
Query: 11 DLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT------IQGLAKLKNLEALDLSSN 64
+LSA+Y + S L+R N LKKL L CG+T + ++LK+L +L N
Sbjct: 133 ELSASYVLFS--LSR----NAAALKKLSLRNCGVTDANLEYLTRPESRLKSLTHFNLRRN 186
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTTLG---LANLPNLKTLDLRDCGI 112
H ++ +A+L +L +DLS N + G LA L L+TL L +CGI
Sbjct: 187 NITHQGVDSIAHLQSLTTIDLSQNTGIGDEGVSRLAPLKQLRTLYLDNCGI 237
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT--IQGLAKLKNLEA 58
+A+L+ L +DLS N I ++R LA L L+ L LD CGI I+ +AK+ NL+
Sbjct: 196 IAHLQSLTTIDLSQNTGIGDEGVSR--LAPLKQLRTLYLDNCGIGAEGIKAIAKM-NLQT 252
Query: 59 LDLSSN 64
+DLS N
Sbjct: 253 VDLSFN 258
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%), Gaps = 16/117 (13%)
Query: 7 LQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGIT---TIQGLAKLKNLEALDL 61
L LDLS N T+ L+ L L N+ +K L LD CG+ T++ L KL +++ L L
Sbjct: 51 LSELDLS-NTRFTNQELSDLVTALNNIPGIKSLRLDSCGLKDSDTVE-LFKLTHIKKLSL 108
Query: 62 SSNY-----YLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
SNY + LE L N + LS + L +L N LK L LR+CG+T
Sbjct: 109 KSNYLKNRPMFNSMLEALYLDYNTE---LSASYVLFSLS-RNAAALKKLSLRNCGVT 161
>gi|405754353|ref|YP_006677817.1| internalin C2 [Listeria monocytogenes SLCC2540]
gi|404223553|emb|CBY74915.1| internalin C2 (LPXTG motif) [Listeria monocytogenes SLCC2540]
Length = 548
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL L+L N L L
Sbjct: 59 TATGKSNVTDTVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITD--LTPL 116
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 117 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 157
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 116 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVAPLAGLSNLQV 168
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L L N L LA LTNLQ L + NQ LANL L TL D I+ I
Sbjct: 169 LYLDLNQITD--LSPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDI 223
>gi|297835804|ref|XP_002885784.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331624|gb|EFH62043.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 673
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 16 YNITSGSLTRL--GLANLTNLKKLDLDGCG--ITTIQGLAKLKNLEALDLSSNYYLHGSL 71
Y I SL +L + N N K LDL GC + + NL+ L+LS+ L
Sbjct: 121 YLINCSSLVKLPSSIRNAANHKILDLSGCSSLVELPSSIGNATNLQTLNLSNCCRLVELP 180
Query: 72 EGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDC 110
+ N TNLQ L+LSG +L L + N NL+TL+LR+C
Sbjct: 181 SSIGNATNLQTLNLSGCSSLVELPSSIGNATNLQTLNLRNC 221
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 27 GLANLTNLKKLDLDGCG-----ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQ 81
+ N T L+KLDL GC +++ L++L ++ SS L S+ N N +
Sbjct: 86 SIENATTLRKLDLSGCSSLVELPSSLGSAINLQDLYLINCSSLVKLPSSIR---NAANHK 142
Query: 82 VLDLSGNQNLTTL--GLANLPNLKTLDLRDC 110
+LDLSG +L L + N NL+TL+L +C
Sbjct: 143 ILDLSGCSSLVELPSSIGNATNLQTLNLSNC 173
>gi|255017074|ref|ZP_05289200.1| internalin E [Listeria monocytogenes FSL F2-515]
Length = 474
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T LG A++T+ + + DLD GITTI+GL L NL L+L N L L
Sbjct: 32 TLLGKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTD--LNPL 89
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L LSGN LA L NLKT+DL IT +
Sbjct: 90 TNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDV 130
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 8 QVLDLSANYNITSGSLTRL---------GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
QV DL+ N+T + RL LA L NLK +DL IT + LA L NL+
Sbjct: 82 QVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQV 141
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L+L N + LA L+NLQ L Q LANL L TL+ + ++ + +
Sbjct: 142 LNLDINQITD--ITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPL 199
>gi|255028875|ref|ZP_05300826.1| internalin E [Listeria monocytogenes LO28]
gi|284800562|ref|YP_003412427.1| internalin E [Listeria monocytogenes 08-5578]
gi|284993748|ref|YP_003415516.1| internalin E [Listeria monocytogenes 08-5923]
gi|386049193|ref|YP_005967184.1| internalin E [Listeria monocytogenes FSL R2-561]
gi|404282695|ref|YP_006683592.1| internalin E [Listeria monocytogenes SLCC2372]
gi|405757251|ref|YP_006686527.1| internalin E [Listeria monocytogenes SLCC2479]
gi|284056124|gb|ADB67065.1| internalin E [Listeria monocytogenes 08-5578]
gi|284059215|gb|ADB70154.1| internalin E [Listeria monocytogenes 08-5923]
gi|346423039|gb|AEO24564.1| internalin E [Listeria monocytogenes FSL R2-561]
gi|404232197|emb|CBY53600.1| internalin E (LPXTG motif) [Listeria monocytogenes SLCC2372]
gi|404235133|emb|CBY56535.1| internalin E (LPXTG motif) [Listeria monocytogenes SLCC2479]
Length = 499
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T LG A++T+ + + DLD GITTI+GL L NL L+L N L L
Sbjct: 57 TLLGKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTD--LNPL 114
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L LSGN LA L NLKT+DL IT +
Sbjct: 115 TNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDV 155
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 8 QVLDLSANYNITSGSLTRL---------GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
QV DL+ N+T + RL LA L NLK +DL IT + LA L NL+
Sbjct: 107 QVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQV 166
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L+L N + LA L+NLQ L Q LANL L TL+ + ++ + +
Sbjct: 167 LNLDINQITD--ITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPL 224
>gi|83629775|gb|ABC26549.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL L+L N L L
Sbjct: 58 TATGKSNVTDTVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITD--LTPL 115
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 116 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 156
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 115 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVAPLAGLSNLQV 167
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L L N L LA LTNLQ L + NQ LANL L TL D I+ I
Sbjct: 168 LYLDLNQITD--LSPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDI 222
>gi|46906502|ref|YP_012891.1| internalin C2 [Listeria monocytogenes serotype 4b str. F2365]
gi|226222897|ref|YP_002757004.1| internalin H (LPXTG motif) [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|254825687|ref|ZP_05230688.1| internalin C2 [Listeria monocytogenes FSL J1-194]
gi|386731034|ref|YP_006204530.1| internalin H (LPXTG motif) [Listeria monocytogenes 07PF0776]
gi|405751486|ref|YP_006674951.1| internalin C2 [Listeria monocytogenes SLCC2378]
gi|406703042|ref|YP_006753396.1| internalin C2 (LPXTG motif) [Listeria monocytogenes L312]
gi|424713133|ref|YP_007013848.1| Internalin-A [Listeria monocytogenes serotype 4b str. LL195]
gi|46879767|gb|AAT03068.1| internalin C2 [Listeria monocytogenes serotype 4b str. F2365]
gi|225875359|emb|CAS04056.1| internalin H (LPXTG motif) [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|293594931|gb|EFG02692.1| internalin C2 [Listeria monocytogenes FSL J1-194]
gi|384389792|gb|AFH78862.1| internalin H (LPXTG motif) [Listeria monocytogenes 07PF0776]
gi|404220686|emb|CBY72049.1| internalin C2 (LPXTG motif) [Listeria monocytogenes SLCC2378]
gi|406360072|emb|CBY66345.1| internalin C2 (LPXTG motif) [Listeria monocytogenes L312]
gi|424012317|emb|CCO62857.1| Internalin-A [Listeria monocytogenes serotype 4b str. LL195]
Length = 548
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL L+L N L L
Sbjct: 59 TATGKSNVTDAVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITD--LTPL 116
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 117 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 157
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 116 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 168
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + NQ LANL L TL D I+ I
Sbjct: 169 LYLDLNQITN--ISPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDI 223
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 138 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYL 191
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ +N L LANL+ L L N+ LA+LPNL + L+D I+ +
Sbjct: 192 SIGNNQV--NDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDNQISDV 245
>gi|403367895|gb|EJY83774.1| Leucine-rich repeat-containing protein 9 [Oxytricha trifallax]
Length = 1637
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 33 NLKKLDL-DGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL 91
NL+KL L D C +T I+GL K K LE L L N +EG+ L L+ LDL N+
Sbjct: 1019 NLRKLQLIDNC-LTKIEGLQKCKLLEELSLEKNKL--QQIEGVGQLRYLKKLDLGCNRIK 1075
Query: 92 TTLGLANLPNLKTLDLRDCGITTIQGIQ 119
GLA L NL L + D I+ + G++
Sbjct: 1076 RIEGLAQLENLTQLSMEDNEISNLDGLE 1103
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L+ TN+K L L GI+ I+GL K+ NLE + LS N L +++GL NL+ L L+
Sbjct: 49 LSYFTNIKTLTLINQGISEIEGLDKMVNLEQMWLSEN--LIENIKGLDKCKNLRDLFLTA 106
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQG 117
N+ GL NL NL+ L L + I ++
Sbjct: 107 NRIKRVRGLDNLINLEKLWLDENRIENLES 136
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 17 NITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
N+ S + ++ L L NL L L I I+GL + K L+ LDL+ N+ +EGL
Sbjct: 789 NLFSNRVKKIKCLEKLVNLNTLILSFNEIEMIEGLQECKVLKRLDLNHNFI--RKIEGLD 846
Query: 76 NLTNLQVLDLSGN 88
N NLQ L+L+ N
Sbjct: 847 NKVNLQTLNLTNN 859
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL + NL+++ L I I+GL K KNL L L++N + GL NL NL+ L L
Sbjct: 70 GLDKMVNLEQMWLSENLIENIKGLDKCKNLRDLFLTANRI--KRVRGLDNLINLEKLWLD 127
Query: 87 GN--QNLTTLGLANLPNLKTLDL 107
N +NL + G++ L LK L++
Sbjct: 128 ENRIENLES-GMSCLVKLKELNV 149
>gi|85679266|gb|ABC72049.1| InlC2 [Listeria monocytogenes]
Length = 547
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL L+L N L L
Sbjct: 58 TATGKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGMQYLNNLLGLELKDNQITD--LTPL 115
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 116 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 156
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 115 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 167
Query: 59 LDLSSNYYLH-GSLEGLANLT-----NLQVLDLSGNQNLTTL--------------GLAN 98
L L N + SL GL NL N QV DL+ NL+ L LA+
Sbjct: 168 LYLDLNQITNISSLAGLTNLQYLSIGNTQVSDLTPLANLSKLTNLRADDNKISDISPLAS 227
Query: 99 LPNLKTLDLRDCGITTI 115
LPNL + L+D I+ +
Sbjct: 228 LPNLIEVHLKDNQISDV 244
>gi|255026402|ref|ZP_05298388.1| internalin E [Listeria monocytogenes FSL J2-003]
Length = 480
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T LG A++T+ + + DLD GITTI+GL L NL L+L N L L
Sbjct: 38 TLLGKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTD--LNPL 95
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L LSGN LA L NLKT+DL IT +
Sbjct: 96 TNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDV 136
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 8 QVLDLSANYNITSGSLTRL---------GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
QV DL+ N+T + RL LA L NLK +DL IT + LA L NL+
Sbjct: 88 QVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQV 147
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L+L N + LA L+NLQ L Q LANL L TL+ + ++ + +
Sbjct: 148 LNLDINQITD--ITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPL 205
>gi|254853465|ref|ZP_05242813.1| internalin C2 [Listeria monocytogenes FSL R2-503]
gi|258606836|gb|EEW19444.1| internalin C2 [Listeria monocytogenes FSL R2-503]
Length = 535
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL L+L N L L
Sbjct: 46 TATGKSNVTDTVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITD--LTPL 103
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 104 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 144
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 103 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVAPLAGLSNLQV 155
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + NQ LANL L TL D I+ I
Sbjct: 156 LYLDLNQITN--ISPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDI 210
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 125 IAGLQSIKTLDL------TSTQITDVAPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYL 178
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ +N L LANL+ L L N+ LA+LPNL + L+D I+ +
Sbjct: 179 SIGNNQV--NDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDNQISDV 232
>gi|156548260|ref|XP_001599951.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like [Nasonia
vitripennis]
Length = 318
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L L L +L+L IT I+ L LKNL++LDLS N +E L NL +LQ L +S
Sbjct: 74 NLDTLQTLVELELRDNQITVIENLDALKNLQSLDLSFNRI--KKIENLDNLVSLQKLFIS 131
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
N+ +A+L NL L+L D I I+ +
Sbjct: 132 SNRITKIENVAHLKNLTMLELGDNKIREIENL 163
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 27/141 (19%)
Query: 4 LRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
L+ LQ LDLS N + ++ L NL +L+KL + IT I+ +A LKNL L+L
Sbjct: 100 LKNLQSLDLSFN------RIKKIENLDNLVSLQKLFISSNRITKIENVAHLKNLTMLELG 153
Query: 63 SNYYLH-GSLEGLANLTNL--------QVLDLSGNQNLTTL-----------GLANLPNL 102
N +L+GL NLT+L ++ +L +NLT L L L L
Sbjct: 154 DNKIREIENLDGLDNLTSLFLGKNKISKIRNLENLKNLTLLILQCNRIVCIENLTELVKL 213
Query: 103 KTLDLRDCGITTIQGIQQFTS 123
+ L L + G+T I+G++ T
Sbjct: 214 EQLYLSENGLTQIEGLENCTK 234
>gi|149242645|pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 168 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 225
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L +G LA+L NL LDL + I+ + + T
Sbjct: 226 NQ-LKDIGTLASLTNLTDLDLANNQISNLAPLSGLT 260
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L+ G
Sbjct: 103 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLNF-G 159
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 160 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 194
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 168 LANLTTLERLDISSNK-VSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 222
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 223 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 266
>gi|16802310|ref|NP_463795.1| internalin E [Listeria monocytogenes EGD-e]
gi|3980136|emb|CAA07458.1| internalin E [Listeria monocytogenes]
gi|16409629|emb|CAD00791.1| internalin E [Listeria monocytogenes EGD-e]
Length = 499
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T LG A++T+ + + DLD GITTI+GL L NL L+L N L L
Sbjct: 57 TLLGKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTD--LNPL 114
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L LSGN LA L NLKT+DL IT +
Sbjct: 115 TNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDV 155
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 8 QVLDLSANYNITSGSLTRL---------GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
QV DL+ N+T + RL LA L NLK +DL IT + LA L NL+
Sbjct: 107 QVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQV 166
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L+L N + LA L+NLQ L Q LANL L TL+ + ++ + +
Sbjct: 167 LNLDINQITD--ITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPL 224
>gi|83629753|gb|ABC26538.1| internalin C2 [Listeria monocytogenes]
gi|83629765|gb|ABC26544.1| internalin C2 [Listeria monocytogenes]
gi|83629773|gb|ABC26548.1| internalin C2 [Listeria monocytogenes]
gi|83629791|gb|ABC26557.1| internalin C2 [Listeria monocytogenes]
gi|83629813|gb|ABC26568.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL L+L N L L
Sbjct: 58 TATGKSNVTDAVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITD--LTPL 115
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 116 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 156
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 115 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 167
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + NQ LANL L TL D I+ I
Sbjct: 168 LYLDLNQITN--ISPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDI 222
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 137 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYL 190
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ +N L LANL+ L L N+ LA+LPNL + L+D I+ +
Sbjct: 191 SIGNNQV--NDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDNQISDV 244
>gi|224120284|ref|XP_002331010.1| predicted protein [Populus trichocarpa]
gi|222872940|gb|EEF10071.1| predicted protein [Populus trichocarpa]
Length = 929
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 75/132 (56%), Gaps = 12/132 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC----GITTIQGLAKLKNL 56
L +L+ L LDLS++ + + L +G +T L L L+GC I +GL +LK+L
Sbjct: 282 LPSLKNLHKLDLSSS-TLDNSFLQTIG--RITTLTSLKLNGCRLSGSIPIAEGLCELKHL 338
Query: 57 EALDLSSNYYLHGSLEG-LANLTNLQVLDLSGNQ---NLTTLGLANLPNLKTLDLRDCGI 112
++LD+S+N L G L LANLT+L+ +DLS N ++++ L L +++ L L D
Sbjct: 339 QSLDISNNS-LTGVLPKCLANLTSLKQIDLSSNHFGGDISSSPLITLTSIQELRLSDNNF 397
Query: 113 TTIQGIQQFTSY 124
++ F+++
Sbjct: 398 QIPISLRSFSNH 409
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 64/138 (46%), Gaps = 32/138 (23%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDL---DGCGITTIQGLAKLKNLE 57
NL +++ +++AN S L + LA L NLK LDL + G Q L LKNL
Sbjct: 231 FGNLSRVRLFNITANGRRISLPLLQ-SLAKLPNLKTLDLGNNNFEGTILAQALPSLKNLH 289
Query: 58 ALDLSS----NYYLH-------------------GSL---EGLANLTNLQVLDLSGNQNL 91
LDLSS N +L GS+ EGL L +LQ LD+S N
Sbjct: 290 KLDLSSSTLDNSFLQTIGRITTLTSLKLNGCRLSGSIPIAEGLCELKHLQSLDISNNSLT 349
Query: 92 TTLG--LANLPNLKTLDL 107
L LANL +LK +DL
Sbjct: 350 GVLPKCLANLTSLKQIDL 367
>gi|254828724|ref|ZP_05233411.1| inlE [Listeria monocytogenes FSL N3-165]
gi|258601129|gb|EEW14454.1| inlE [Listeria monocytogenes FSL N3-165]
Length = 499
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T LG A++T+ + + DLD GITTI+GL L NL L+L N L L
Sbjct: 57 TLLGKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTD--LNPL 114
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L LSGN LA L NLKT+DL IT +
Sbjct: 115 KNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDV 155
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 8 QVLDLSANYNITSGSLTRL---------GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
QV DL+ N+T + RL LA L NLK +DL IT + LA L NL+
Sbjct: 107 QVTDLNPLKNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQV 166
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L+L N + LA L+NLQ L Q LANL L TL+ + ++ + +
Sbjct: 167 LNLDINQITD--ITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPL 224
>gi|83629785|gb|ABC26554.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL L+L N L L
Sbjct: 58 TATGKSNVTDTVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITD--LTPL 115
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 116 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 156
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 115 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVAPLAGLSNLQV 167
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + NQ LANL L TL D I+ I
Sbjct: 168 LYLDLNQITN--ISPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDI 222
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 137 IAGLQSIKTLDL------TSTQITDVAPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYL 190
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ +N L LANL+ L L N+ LA+LPNL + L+D I+ +
Sbjct: 191 SIGNNQV--NDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDNQISDV 244
>gi|83629749|gb|ABC26536.1| internalin C2 [Listeria monocytogenes]
gi|83629755|gb|ABC26539.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL L+L N L L
Sbjct: 58 TATGKSNVTDTVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITD--LTPL 115
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 116 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 156
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 115 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVAPLAGLSNLQV 167
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + NQ LANL L TL D I+ I
Sbjct: 168 LYLDLNQITN--ISPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDI 222
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 137 IAGLQSIKTLDL------TSTQITDVAPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYL 190
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ +N L LANL+ L L N+ LA+LPNL + L+D I+ +
Sbjct: 191 SIGNNQV--NDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDNQISDV 244
>gi|423473486|ref|ZP_17450228.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG6O-2]
gi|402425355|gb|EJV57502.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG6O-2]
Length = 969
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+KL L +T I +++L++L+ LDLSSN S++ ++ L NL +L L
Sbjct: 238 GLEYMTNLEKLTLRESNVTDISVISELRHLKYLDLSSNPI--ESIQPVSKLENLDMLFLR 295
Query: 87 GNQNLTTLGLANLPNLKTLDL 107
N+ L+ + +KTLDL
Sbjct: 296 DNKIADLTPLSQMKKIKTLDL 316
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
++ L +LK LDL I +IQ ++KL+NL+ L L N L L+ + ++ LDL G
Sbjct: 261 ISELRHLKYLDLSSNPIESIQPVSKLENLDMLFLRDNKI--ADLTPLSQMKKIKTLDLIG 318
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
N L + +LK + L + I+ + GI++
Sbjct: 319 NNIKDLTPLFTVSSLKEVYLANNQISNLSGIEKL 352
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL ++ NL+ L L+G G+ I+ ++ LK L A+++S N + L+ L NLQ L+L+
Sbjct: 586 GLESMVNLENLTLEGVGLKNIEFISNLKQLNAMNVSHNQI--EDITPLSLLKNLQWLNLA 643
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
N+ L ++ +L +L L I ++ + Q +
Sbjct: 644 DNRVKDVSVLGSMLDLISLKLAGNEIRDVRPLIQLGQW 681
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 30 NLTNLKKLDL-DGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
+L +K L + G GI I GL + NLE L L + S+ ++ L +L+ LDLS N
Sbjct: 218 DLLKIKTLTIYSGEGINEIAGLEYMTNLEKLTLRESNVTDISV--ISELRHLKYLDLSSN 275
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ ++ L NL L LRD I + + Q
Sbjct: 276 PIESIQPVSKLENLDMLFLRDNKIADLTPLSQ 307
>gi|302822744|ref|XP_002993028.1| hypothetical protein SELMODRAFT_431169 [Selaginella moellendorffii]
gi|300139120|gb|EFJ05867.1| hypothetical protein SELMODRAFT_431169 [Selaginella moellendorffii]
Length = 381
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 33 NLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLT 92
NLK++DL G +T+++ LA LK L+ L LS N SL GL L NL VL+ S N+ +
Sbjct: 40 NLKRIDLSGNLLTSVEALAPLKKLKWLSLSGNKLT--SLTGLEGLKNLSVLNCSKNELTS 97
Query: 93 TLGLANLPNLKTL 105
T LA L L+ L
Sbjct: 98 TEMLAKLRELRAL 110
>gi|242003327|ref|XP_002422696.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212505518|gb|EEB09958.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 853
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 7 LQVLDLSANYNITSGSLTRLGLA-NLTNLKKLDLDGCGIT-----TIQGLAK---LKNLE 57
LQ+LDLS N NI + L N+ NLKKL L GC I TI G+ K +NL
Sbjct: 440 LQILDLSFNKNIKPLQTLSINLFNNMKNLKKLILTGCRINNLSNQTISGIKKNPLFENLT 499
Query: 58 ALDLSSN--YYLHGSLEGLANLTNLQVLDLSGN 88
LDLS N + SL L +L L++L+LSGN
Sbjct: 500 VLDLSYNNVKLIESSL--LKSLPKLEILNLSGN 530
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 13/110 (11%)
Query: 24 TRLGLANLTNLKKLDL-DGCGITTIQGLAKL-KNLEALDLSSNYYLHGSLEGLANLTNLQ 81
T L L N T LK L+L +G + T + + +NLE L L + + L NLQ
Sbjct: 382 TTLNLTNFTELKFLNLSNGIFLNTKNVIKSIGENLEHLSLRNADLFKVPRDIFEKLNNLQ 441
Query: 82 VLDLSGNQNLTTLG------LANLPNLKTLDLRDCGIT-----TIQGIQQ 120
+LDLS N+N+ L N+ NLK L L C I TI GI++
Sbjct: 442 ILDLSFNKNIKPLQTLSINLFNNMKNLKKLILTGCRINNLSNQTISGIKK 491
>gi|125598847|gb|EAZ38423.1| hypothetical protein OsJ_22801 [Oryza sativa Japonica Group]
Length = 801
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 45/119 (37%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 7 LQVLDLSAN--YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN 64
L++L+LS N IT+G+L R L L L I+TI+GL +L L LD+S N
Sbjct: 555 LRLLNLSGNSIVRITAGALPR-------GLHMLSLSKNNISTIEGLRELTRLRLLDISYN 607
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
+ GLA+ ++L+ L L GN+ GL L LK LDLR I+T +G+ Q +
Sbjct: 608 R-ISRIGHGLASCSSLKELYLGGNKISEVDGLHRLLKLKVLDLRHNKISTSKGLGQLAA 665
>gi|443316011|ref|ZP_21045475.1| Leucine Rich Repeat (LRR)-containing protein [Leptolyngbya sp. PCC
6406]
gi|442784393|gb|ELR94269.1| Leucine Rich Repeat (LRR)-containing protein [Leptolyngbya sp. PCC
6406]
Length = 437
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L+ LTNL L L G I+ IQ LA L LE+L L SN + ++ L L NL L LSG
Sbjct: 98 LSTLTNLTSLVLSGNQISDIQPLASLTKLESLFLESNQITN--IQSLGGLHNLTWLSLSG 155
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTI 115
NQ + L+NL L+ L L D I +
Sbjct: 156 NQVVDVQPLSNLTGLEWLFLDDNQIVDV 183
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 1 LANLRYL-----QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKN 55
L NLR+L Q++D+ LA L+ LK L L+G IT + LA L N
Sbjct: 255 LENLRWLGLDDNQIVDVQP-------------LAALSTLKNLYLNGNQITDVSSLAALTN 301
Query: 56 LEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
LE+L L N + ++ L+ L NL L LSGNQ + L+ L L+ L L D I +
Sbjct: 302 LESLVLGDNQIV--DIQSLSLLENLTFLVLSGNQIVNVSPLSALVRLERLGLNDNQIQDV 359
Query: 116 QGIQQFT 122
Q + T
Sbjct: 360 QPLATLT 366
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 20/116 (17%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS----------------SNYYLHGS- 70
L+NLT L+ L LD I + LA L+NLE L LS N YL+G+
Sbjct: 164 LSNLTGLEWLFLDDNQIVDVAPLATLQNLERLLLSYNQIVEIGALSALEKLQNLYLNGNQ 223
Query: 71 ---LEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
++ L+ L NL L+L NQ + LA+L NL+ L L D I +Q + ++
Sbjct: 224 IEDVQPLSGLRNLAWLELKENQVMNIQPLADLENLRWLGLDDNQIVDVQPLAALST 279
>gi|313843974|ref|YP_004061637.1| hypothetical protein OlV1_004c [Ostreococcus lucimarinus virus
OlV1]
gi|312599359|gb|ADQ91381.1| hypothetical protein OlV1_004c [Ostreococcus lucimarinus virus
OlV1]
Length = 351
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 13/111 (11%)
Query: 10 LDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLSSNYY 66
LDLS N LT L + LTNL++LDLD +T++ + + +L LE LDLS N +
Sbjct: 36 LDLSYN------KLTSLPESIGRLTNLERLDLDNNELTSLPESIGRLTKLEKLDLSYNNF 89
Query: 67 LHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGITTI 115
E + LT L++L L NLT+L + NL NL+ L+L D +T++
Sbjct: 90 TRLP-ESIGRLTKLEILSLHT-SNLTSLPESIGNLTNLEYLELTDNNLTSL 138
>gi|149242641|pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
gi|149242643|pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 168 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 225
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L +G LA+L NL LDL + I+ + + T
Sbjct: 226 NQ-LKDIGTLASLTNLTDLDLANNQISNLAPLSGLT 260
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L+ G
Sbjct: 103 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLNF-G 159
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 160 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 194
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 168 LANLTTLERLDISSNK-VSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 222
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 223 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 266
>gi|83629781|gb|ABC26552.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL L+L N L L
Sbjct: 58 TATGKSNVTDAVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITD--LTPL 115
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 116 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 156
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 115 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVAPLAGLSNLQV 167
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L L N L LA LTNLQ L + NQ LANL L TL D I+ I
Sbjct: 168 LYLDLNQITD--LSPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDI 222
>gi|115470209|ref|NP_001058703.1| Os07g0106100 [Oryza sativa Japonica Group]
gi|33354217|dbj|BAC81183.1| protein phosphatase regulatory subunit-like protein [Oryza sativa
Japonica Group]
gi|50508994|dbj|BAD31943.1| protein phosphatase regulatory subunit-like protein [Oryza sativa
Japonica Group]
gi|113610239|dbj|BAF20617.1| Os07g0106100 [Oryza sativa Japonica Group]
gi|215695072|dbj|BAG90263.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 761
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 45/119 (37%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 7 LQVLDLSAN--YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN 64
L++L+LS N IT+G+L R L L L I+TI+GL +L L LD+S N
Sbjct: 515 LRLLNLSGNSIVRITAGALPR-------GLHMLSLSKNNISTIEGLRELTRLRLLDISYN 567
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
+ GLA+ ++L+ L L GN+ GL L LK LDLR I+T +G+ Q +
Sbjct: 568 R-ISRIGHGLASCSSLKELYLGGNKISEVDGLHRLLKLKVLDLRHNKISTSKGLGQLAA 625
>gi|351713257|gb|EHB16176.1| Protein phosphatase 1 regulatory subunit 7 [Heterocephalus glaber]
Length = 360
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 33/143 (23%)
Query: 1 LANLRYLQVLDLSAN--YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L L L++LD+S N NI G+ LT LKKL L I+ I+ L+ L L+
Sbjct: 138 LEALTELEILDISFNLLRNIE-------GIDQLTQLKKLFLVNNKISKIENLSNLHQLQM 190
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ-----------NLTTL-----------GL 96
L+L SN ++E + LTNL+ L L N+ NLT L GL
Sbjct: 191 LELGSNRI--RAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIEGL 248
Query: 97 ANLPNLKTLDLRDCGITTIQGIQ 119
NL NL+ L L GI I+G++
Sbjct: 249 QNLVNLRELYLSHNGIEVIEGLE 271
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+NL LQ+L+L +N I + + LTNL+ L L IT +Q L L NL L
Sbjct: 182 LSNLHQLQMLELGSN-RIRAIE----NIDTLTNLESLFLGKNKITKLQNLDALTNLTVLS 236
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ SN +EGL NL NL+ L LS N GL N L LD+ I I+ I
Sbjct: 237 MQSNRL--TKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISH 294
Query: 121 FTS 123
T
Sbjct: 295 LTE 297
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 7 LQVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
LQ LD N + S RL GL NL NL++L L GI I+GL L LD++
Sbjct: 223 LQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIA 282
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGN 88
SN +E +++LT LQ ++ N
Sbjct: 283 SNRI--KKIENISHLTELQEFWMNDN 306
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 20/115 (17%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH------------------- 68
L L +L++LDL I I+ L L LE LD+S N +
Sbjct: 116 LEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEGIDQLTQLKKLFLVNNK 175
Query: 69 -GSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
+E L+NL LQ+L+L N+ + L NL++L L IT +Q + T
Sbjct: 176 ISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALT 230
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 37 LDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGL 96
+DL+ I I+G LK ++ L L N L +E L L +L+ LDL NQ L
Sbjct: 81 VDLNHYRIGKIEGFEVLKKVKTLCLRQN--LIKCIENLEELQSLRELDLYDNQIKKIENL 138
Query: 97 ANLPNLKTLDLRDCGITTIQGIQQFT 122
L L+ LD+ + I+GI Q T
Sbjct: 139 EALTELEILDISFNLLRNIEGIDQLT 164
>gi|301103294|ref|XP_002900733.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262101488|gb|EEY59540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 287
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL NLK L L+ G+T I+ L L NL L LS N L +E L L L LDLS
Sbjct: 68 GLEAYYNLKALWLESNGLTRIENLEHLVNLRCLYLSKN--LIEKVENLHALCELNTLDLS 125
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITT 114
N+ + GLA LPNL +L+ +TT
Sbjct: 126 ENRIQSLEGLARLPNLLSLNATRNRLTT 153
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 60/117 (51%), Gaps = 14/117 (11%)
Query: 2 ANLRYLQVLD-LSANYNIT-----SGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLK 54
A+ R Q ++ L A YN+ S LTR+ L +L NL+ L L I ++ L L
Sbjct: 58 AHFRGFQRIEGLEAYYNLKALWLESNGLTRIENLEHLVNLRCLYLSKNLIEKVENLHALC 117
Query: 55 NLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT----LGLANLPNLKTLDL 107
L LDLS N SLEGLA L NL L+ + N+ LTT L L+ P L +D+
Sbjct: 118 ELNTLDLSENRI--QSLEGLARLPNLLSLNATRNR-LTTSADLLELSQCPLLNNIDI 171
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 43 GITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNL 102
G I+GL NL+AL L SN +E L +L NL+ L LS N L L L
Sbjct: 62 GFQRIEGLEAYYNLKALWLESNGLTR--IENLEHLVNLRCLYLSKNLIEKVENLHALCEL 119
Query: 103 KTLDLRDCGITTIQGIQQ 120
TLDL + I +++G+ +
Sbjct: 120 NTLDLSENRIQSLEGLAR 137
>gi|386042598|ref|YP_005961403.1| internalin E [Listeria monocytogenes 10403S]
gi|404409495|ref|YP_006695083.1| internalin E [Listeria monocytogenes SLCC5850]
gi|2347106|gb|AAB67971.1| inlE [Listeria monocytogenes]
gi|345535832|gb|AEO05272.1| internalin E [Listeria monocytogenes 10403S]
gi|404229321|emb|CBY50725.1| internalin E (LPXTG motif) [Listeria monocytogenes SLCC5850]
Length = 499
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T LG A++T+ + + DLD GITTI+GL L NL L+L N L L
Sbjct: 57 TLLGKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTD--LNPL 114
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L LSGN LA L NLKT+DL IT +
Sbjct: 115 KNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDV 155
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 8 QVLDLSANYNITSGSLTRL---------GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
QV DL+ N+T + RL LA L NLK +DL IT + LA L NL+
Sbjct: 107 QVTDLNPLKNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQV 166
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L+L N + LA L+NLQ L Q LANL L TL+ + ++ + +
Sbjct: 167 LNLDINQITD--ITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPL 224
>gi|27574254|pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
gi|27574256|pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
gi|27574257|pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
gi|27574258|pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 173 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 230
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L +G LA+L NL LDL + I+ + + T
Sbjct: 231 NQ-LKDIGTLASLTNLTDLDLANNQISNLAPLSGLT 265
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 108 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 164
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 165 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 199
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 130 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVT---DLKPLANLTTLERLDISS 186
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 187 NKVSDISVLAKLTNLESL 204
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 173 LANLTTLERLDISSNK-VSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 227
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 228 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 271
>gi|384248268|gb|EIE21752.1| L domain-like protein [Coccomyxa subellipsoidea C-169]
Length = 329
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +LT L+KL + + ++ GL LE L LS N LEGL +L NL+VLD+S
Sbjct: 189 GLNSLTALRKLSVQSNRLMSMAGLQHCSQLEELYLSHNGIQR--LEGLESLPNLRVLDVS 246
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NQ GL L L L L D IT++
Sbjct: 247 SNQVSDLTGLEALTQLTDLWLNDNAITSL 275
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL LTNL++L L I I GL L L L + SN + S+ GL + + L+ L LS
Sbjct: 167 GLEGLTNLQELWLGRNRIAEISGLNSLTALRKLSVQSNRLM--SMAGLQHCSQLEELYLS 224
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N GL +LPNL+ LD+ ++ + G++ T
Sbjct: 225 HNGIQRLEGLESLPNLRVLDVSSNQVSDLTGLEALT 260
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 23 LTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQV 82
++ GL + + L++L L GI ++GL L NL LD+SSN L GL LT L
Sbjct: 207 MSMAGLQHCSQLEELYLSHNGIQRLEGLESLPNLRVLDVSSNQV--SDLTGLEALTQLTD 264
Query: 83 LDLSGNQNLTTLG 95
L L+ N +T+LG
Sbjct: 265 LWLNDNA-ITSLG 276
>gi|83629757|gb|ABC26540.1| internalin C2 [Listeria monocytogenes]
gi|83629779|gb|ABC26551.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL L+L N L L
Sbjct: 58 TATGKSNVTDTVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITD--LTPL 115
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 116 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 156
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 115 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVAPLAGLSNLQV 167
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + NQ LANL L TL D I+ I
Sbjct: 168 LYLDLNQITN--ISPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDI 222
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 137 IAGLQSIKTLDL------TSTQITDVAPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYL 190
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ +N L LANL+ L L N+ LA+LPNL + L+D I+ +
Sbjct: 191 SIGNNQV--NDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDNQISDV 244
>gi|321478983|gb|EFX89939.1| hypothetical protein DAPPUDRAFT_39831 [Daphnia pulex]
Length = 416
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQ--GLAKLKNLEALDLSSNY 65
QVLDLS + N+ + ANL NL+K+ L C I + L L NL LD+S N
Sbjct: 41 QVLDLSGS-NLQTLPREAFSRANLLNLQKIYLASCRIGQVDPTALRGLTNLIELDISDNL 99
Query: 66 YLHGSLEGLANLTNLQVLDLSGN--QNLTTLGLANLPNLKTLDLRDCGITTI 115
E L + +L+ L LS N Q + P L LDL DC I T+
Sbjct: 100 LTDVPSEALRDAVSLRELRLSSNPIQKIEQGAFDQAPGLVKLDLSDCQIETL 151
>gi|255028812|ref|ZP_05300763.1| internalin A [Listeria monocytogenes LO28]
Length = 502
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 195 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 252
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 253 NQ-LKDIGTLASLTNLTDLDLANNQIS 278
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 130 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 186
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 187 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 221
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 152 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVT---DLKPLANLTTLERLDISS 208
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 209 NKVSDISVLAKLTNLESL 226
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 195 LANLTTLERLDISSNK-VSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 249
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 250 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 293
>gi|255520544|ref|ZP_05387781.1| internalin H (LPXTG motif) [Listeria monocytogenes FSL J1-175]
Length = 548
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL L+L N L L
Sbjct: 59 TATGKSNVTDAVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITD--LTPL 116
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 117 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 157
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 116 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVAPLAGLSNLQV 168
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + NQ LANL L TL D I+ I
Sbjct: 169 LYLDLNQITN--ISPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDI 223
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 138 IAGLQSIKTLDL------TSTQITDVAPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYL 191
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ +N L LANL+ L L N+ LA+LPNL + L+D I+ +
Sbjct: 192 SIGNNQV--NDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDNQISDV 245
>gi|300764607|ref|ZP_07074599.1| internalin C2 [Listeria monocytogenes FSL N1-017]
gi|404279818|ref|YP_006680716.1| internalin C2 [Listeria monocytogenes SLCC2755]
gi|404285635|ref|YP_006692221.1| internalin C2 [Listeria monocytogenes serotype 7 str. SLCC2482]
gi|300514714|gb|EFK41769.1| internalin C2 [Listeria monocytogenes FSL N1-017]
gi|404226453|emb|CBY47858.1| internalin C2 (LPXTG motif) [Listeria monocytogenes SLCC2755]
gi|404244564|emb|CBY02789.1| internalin C2 (LPXTG motif) [Listeria monocytogenes serotype 7 str.
SLCC2482]
Length = 548
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL L+L N L L
Sbjct: 59 TATGKSNVTDTVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITD--LTPL 116
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 117 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 157
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 116 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVAPLAGLSNLQV 168
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + NQ LANL L TL D I+ I
Sbjct: 169 LYLDLNQITN--ISPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDI 223
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 138 IAGLQSIKTLDL------TSTQITDVAPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYL 191
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ +N L LANL+ L L N+ LA+LPNL + L+D I+ +
Sbjct: 192 SIGNNQV--NDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDNQISDV 245
>gi|428225640|ref|YP_007109737.1| hypothetical protein GEI7407_2206 [Geitlerinema sp. PCC 7407]
gi|427985541|gb|AFY66685.1| leucine-rich repeat-containing protein [Geitlerinema sp. PCC 7407]
Length = 504
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LA+L ++VL +S N I+ LA LT L+ LDL I I L L+NLE L
Sbjct: 311 LASLGAIRVLKISGNRPISDLR----PLAGLTTLQALDLSEASIRDITPLRGLRNLETLV 366
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
LS N LE L+ L L L + GNQ +A L +L+TL L IT+++ +
Sbjct: 367 LSGNQIQQ--LESLSGLNRLSYLAIGGNQISDLRAIAALYSLQTLMLDSNRITSVRPL 422
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L L NL +LDL G + I+ LA LE L+LS+N S L + +L+ LDL
Sbjct: 180 LPTLPNLHQLDLSGSQVGDIRSLAPQPRLETLNLSANRI---SSIALPAMPSLRSLDLEN 236
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQ 116
N A++ L++L+L + I ++Q
Sbjct: 237 NALTRVTIPASMGKLESLNLANNAIASLQ 265
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 49/108 (45%), Gaps = 20/108 (18%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYY-----------LH-------- 68
L++L NL+ LDL +T + L L L+AL+L N LH
Sbjct: 114 LSSLPNLRALDLSYANLTDVTVLGTLGTLQALNLRGNPVRDLRPLQGLQRLHTLTLGWST 173
Query: 69 -GSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
L L L NL LDLSG+Q LA P L+TL+L I++I
Sbjct: 174 VTDLSTLPTLPNLHQLDLSGSQVGDIRSLAPQPRLETLNLSANRISSI 221
>gi|356577917|ref|XP_003557068.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
GSO2-like [Glycine max]
Length = 949
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 70/133 (52%), Gaps = 14/133 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI--QGLAKLKNLEA 58
L L+YL LDLS+NY + + + LG +L +L+ LDL G + L L NL+
Sbjct: 103 LLELKYLNRLDLSSNYFVLTPIPSFLG--SLESLRYLDLSLSGFMGLIPHQLGNLSNLQH 160
Query: 59 LDLSSNYYLH-GSLEGLANLTNLQVLDLSGNQ-----NLTTLGLANLPNLKTLDLRDCGI 112
L+L NY L +L ++ L +L+ LDLSG+ N ++ L+ LP+L L L C I
Sbjct: 161 LNLGYNYALQIDNLNWISRLYSLEYLDLSGSDLHKLVNSQSV-LSALPSLSELHLESCQI 219
Query: 113 TTI---QGIQQFT 122
+ +G FT
Sbjct: 220 DNLGPPKGKTNFT 232
>gi|83629899|gb|ABC26611.1| internalin E [Listeria monocytogenes]
gi|83629915|gb|ABC26619.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T LG A++T+ + + DLD GITTI+GL L NL L+L N L L
Sbjct: 56 TLLGKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTD--LNPL 113
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L LSGN LA L NLKT+DL IT +
Sbjct: 114 KNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDV 154
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 8 QVLDLSANYNITSGSLTRL---------GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
QV DL+ N+T + RL LA L NLK +DL IT + LA L NL+
Sbjct: 106 QVTDLNPLKNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQV 165
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L+L N + LA L+NLQ L Q LANL L TL+ + ++ + +
Sbjct: 166 LNLDINQITD--ITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPL 223
>gi|229095201|ref|ZP_04226193.1| hypothetical protein bcere0020_4580 [Bacillus cereus Rock3-29]
gi|228688060|gb|EEL41946.1| hypothetical protein bcere0020_4580 [Bacillus cereus Rock3-29]
Length = 866
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL ++TNL+KL L +T I ++KL++L+ +DL+SN ++ + L N+ +L L
Sbjct: 225 GLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPI--KNIHPIEQLENINMLFLR 282
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQ 116
N+ L+ + +KTLDL I IQ
Sbjct: 283 DNKISDLTPLSKMKKIKTLDLVGNNIEDIQ 312
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+ L L+G G+ I+ ++ LK L +++S N + L++L NLQ L+L+
Sbjct: 573 GLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSHNQI--EDITPLSSLKNLQWLNLA 630
Query: 87 GN--QNLTTLG 95
N +++T +G
Sbjct: 631 DNHIKDVTVIG 641
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
++ ++NL +L++ I I L+KL L+ L+L NY + L+NLT+L ++L
Sbjct: 357 SISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYI--SDISPLSNLTDLHEMNLG 414
Query: 87 GNQ 89
N+
Sbjct: 415 ANE 417
>gi|158429248|pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 172 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 229
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L +G LA+L NL LDL + I+ + + T
Sbjct: 230 NQ-LKDIGTLASLTNLTDLDLANNQISNLAPLSGLT 264
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 107 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 163
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 164 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 198
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 129 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVT---DLKPLANLTTLERLDISS 185
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 186 NKVSDISVLAKLTNLESL 203
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 172 LANLTTLERLDISSNK-VSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 226
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 227 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 270
>gi|83629803|gb|ABC26563.1| internalin C2 [Listeria monocytogenes]
gi|83629807|gb|ABC26565.1| internalin C2 [Listeria monocytogenes]
gi|83629809|gb|ABC26566.1| internalin C2 [Listeria monocytogenes]
gi|83629811|gb|ABC26567.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + DLDG G+TTI+G+ L NL L+L N L L
Sbjct: 58 TATGKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITD--LTPL 115
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 116 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 156
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 115 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 167
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + GN ++ L LANL L TL D I+ I
Sbjct: 168 LYLDLNQITN--ISPLAGLTNLQYLSI-GNAQVSDLTPLANLSKLTTLKADDNKISDI 222
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 137 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYL 190
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA+LPNL + L++ I+ +
Sbjct: 191 SIGNAQV--SDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDV 244
>gi|83629953|gb|ABC26638.1| internalin E [Listeria monocytogenes]
gi|83629959|gb|ABC26641.1| internalin E [Listeria monocytogenes]
gi|83629965|gb|ABC26644.1| internalin E [Listeria monocytogenes]
gi|83629967|gb|ABC26645.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T LG A++T+ + + DLD GITTI+GL L NL L+L N L L
Sbjct: 56 TLLGKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTD--LNPL 113
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L LSGN LA L NLKT+DL IT +
Sbjct: 114 KNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDV 154
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 8 QVLDLSANYNITSGSLTRL---------GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
QV DL+ N+T + RL LA L NLK +DL IT + LA L NL+
Sbjct: 106 QVTDLNPLKNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQV 165
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L+L N + LA L+NLQ L Q LANL L TL+ + ++ + +
Sbjct: 166 LNLDINQITD--ITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPL 223
>gi|456862125|gb|EMF80703.1| leucine rich repeat protein [Leptospira weilii serovar Topaz str.
LT2116]
Length = 206
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 6 YLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITTI-QGLAKLKNLEALDLS 62
+L +Y I G T L L N T+++ L+L +TT +G+ K +NL+ LDLS
Sbjct: 23 FLTEFRAEESYYIEEGIYTDLNEALKNPTDVRVLNLSYRYLTTFPKGIEKFQNLKHLDLS 82
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
N++ E + L NLQ LDLS N N L + L NL+ L+L +TT+
Sbjct: 83 ENFFKTLPQE-IGRLQNLQELDLSFNNNPIDLPQEIGRLQNLERLNLSGNRLTTL 136
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ L+ LQ LDLS N N + L NL++L+L G +TT+ Q + +L+NL+ L
Sbjct: 93 IGRLQNLQELDLSFNNNPIDLPQE---IGRLQNLERLNLSGNRLTTLSQEIWRLQNLQEL 149
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
+LSSNY + E + L NL+ L+LSGN+
Sbjct: 150 NLSSNYLIDLPQE-IGRLQNLERLNLSGNR 178
>gi|9964577|ref|NP_065045.1| Possible surface protein [Amsacta moorei entomopoxvirus 'L']
gi|9944786|gb|AAG02969.1|AF250284_263 AMV263 [Amsacta moorei entomopoxvirus 'L']
Length = 288
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 70/139 (50%), Gaps = 35/139 (25%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKN---LEALDLSS 63
LQVL + N NI+S G+ NLT L++L C T+I L ++KN L+ L+ SS
Sbjct: 125 LQVL-ICNNTNISSLE----GIENLTKLREL---KCSFTSINSLKEIKNHSNLQILNFSS 176
Query: 64 NYYLHGSLEGLANLTNLQ-----------VLDLSGNQNLTTL-----------GLANLPN 101
SLE + NL NL+ +LD+ +NL L G+ NL N
Sbjct: 177 TNI--SSLEDIKNLVNLKNLIFHKTNINSLLDIYNLKNLQKLCCSYTKINSLNGIQNLFN 234
Query: 102 LKTLDLRDCGITTIQGIQQ 120
LK LD + IT+++GI++
Sbjct: 235 LKNLDCSNTNITSLKGIEK 253
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+ N LQ+L+ S+ NI+S + NL NLK L I ++ + LKNL+ L
Sbjct: 163 IKNHSNLQILNFSST-NISSLE----DIKNLVNLKNLIFHKTNINSLLDIYNLKNLQKLC 217
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTL 105
S Y SL G+ NL NL+ LD S N N+T+L G+ L NL+ L
Sbjct: 218 CS--YTKINSLNGIQNLFNLKNLDCS-NTNITSLKGIEKLNNLQIL 260
>gi|418755276|ref|ZP_13311483.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
gi|409964287|gb|EKO32177.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
Length = 358
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 66/118 (55%), Gaps = 9/118 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI-QGLAKLKNLEAL 59
+ NL+ LQ L+L++N T + NL L+KL L +TT+ + + L+NL+ L
Sbjct: 161 IGNLQNLQDLNLNSNQFTTLPK----EIWNLQKLQKLSLGRNQLTTLPEEIWNLQNLKTL 216
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCGITTI 115
DL N L E + NL NLQ LDL GNQ LTTL + L NLK L L + +TT+
Sbjct: 217 DLEGNQ-LATLPEEIGNLQNLQTLDLEGNQ-LTTLPKEIGKLQNLKKLYLYNNRLTTL 272
>gi|404412362|ref|YP_006697949.1| internalin E [Listeria monocytogenes SLCC7179]
gi|404238061|emb|CBY59462.1| internalin E (LPXTG motif) [Listeria monocytogenes SLCC7179]
Length = 499
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T LG A++T+ + + DLD GITTI+GL L NL L+L N L L
Sbjct: 57 TLLGKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTD--LNPL 114
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L LSGN LA L NLKT+DL IT +
Sbjct: 115 TNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDV 155
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 8 QVLDLSANYNITSGSLTRL---------GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
QV DL+ N+T + RL LA L NLK +DL IT + LA L NL+
Sbjct: 107 QVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQV 166
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L+L N + LA L+NLQ L Q LANL L TL+ + ++ + +
Sbjct: 167 LNLDINQITD--ITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPL 224
>gi|12054796|emb|CAC20636.1| internalin E [Listeria monocytogenes]
Length = 499
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T LG A++T+ + + DLD GITTI+GL L NL L+L N L L
Sbjct: 57 TLLGKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTD--LNPL 114
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L LSGN LA L NLKT+DL IT +
Sbjct: 115 TNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDV 155
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 55/120 (45%), Gaps = 11/120 (9%)
Query: 8 QVLDLSANYNITSGSLTRL---------GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
QV DL+ N+T + RL LA L NLK +DL IT + LA L NL+
Sbjct: 107 QVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQV 166
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L+L N + LA L+NLQ L Q LANL L L+ + ++ + +
Sbjct: 167 LNLDINQITD--ITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPL 224
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 56/116 (48%), Gaps = 13/116 (11%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
LA L LQVL+L N +IT LA L+NL+ L ++ + LA L L A
Sbjct: 158 LAGLSNLQVLNLDINQITDITP-------LAGLSNLQFLSFGSTQVSDLTPLANLSKLTA 210
Query: 59 LD-LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
L+ ++S L GL+NLT + L NQ LA LPNL + L + IT
Sbjct: 211 LNAMNSKVSDVSPLTGLSNLTEVY---LEENQISDVSPLAKLPNLSIVTLTNQTIT 263
>gi|376262848|ref|YP_005149568.1| putative glycosyl hydrolase [Clostridium sp. BNL1100]
gi|373946842|gb|AEY67763.1| putative glycosyl hydrolase [Clostridium sp. BNL1100]
Length = 587
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Query: 7 LQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSN 64
L LDL+ Y I +G T L LTNL+ LDL +T++ L LKNL L L N
Sbjct: 442 LYKLDLAKVYRLKIPTGYKTLNDLKLLTNLEYLDLSNTKLTSVSSLVSLKNLRVLYLYKN 501
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ L LT L+VL ++GN+ LA L NL L +R+ IT + +
Sbjct: 502 --SIKDISPLKGLTKLEVLSINGNKVSNISALAGLTNLTELYIRENIITDYSPVAK 555
>gi|320033516|gb|EFW15464.1| protein phosphatase PP1 regulatory subunit sds22 [Coccidioides
posadasii str. Silveira]
Length = 344
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L +LT+L++L L IT I+ ++ L NL+ L L SN SL GL+ LT+L+ L +S
Sbjct: 184 LDDLTSLEELWLGKNKITEIKNISHLSNLKILSLPSNRL--TSLSGLSGLTSLEELYVSH 241
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N GL +L NL LD+ + I+T++ I +
Sbjct: 242 NAITHISGLESLNNLHVLDISNNQISTLENISHLS 276
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
+++L+NLK L L +T++ GL+ L +LE L +S N H S GL +L NL VLD+S
Sbjct: 206 ISHLSNLKILSLPSNRLTSLSGLSGLTSLEELYVSHNAITHIS--GLESLNNLHVLDISN 263
Query: 88 NQNLTTLGLANLPNLKTL 105
NQ T +++L +++ L
Sbjct: 264 NQISTLENISHLSHIEEL 281
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL LT L+ L+L I I+ L L +LE L L N ++ +++L+NL++L L
Sbjct: 161 GLEGLTKLRNLELGANRIREIENLDDLTSLEELWLGKNKI--TEIKNISHLSNLKILSLP 218
Query: 87 GNQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQ 119
N+ LT+L GL+ L +L+ L + IT I G++
Sbjct: 219 SNR-LTSLSGLSGLTSLEELYVSHNAITHISGLE 251
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 7/89 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+++L L++L L +N +TS S GL+ LT+L++L + IT I GL L NL LD
Sbjct: 206 ISHLSNLKILSLPSN-RLTSLS----GLSGLTSLEELYVSHNAITHISGLESLNNLHVLD 260
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
+S+N +LE +++L++++ L S N+
Sbjct: 261 ISNNQI--STLENISHLSHIEELWASNNK 287
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL LTNL LDL I I+ L+KL L L N +EGL LT L+ L+L
Sbjct: 117 GLDQLTNLTSLDLSFNNIKHIKNLSKLVQLTDLYFVQNRI--QKIEGLEGLTKLRNLELG 174
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ L +L +L+ L L IT I+ I +
Sbjct: 175 ANRIREIENLDDLTSLEELWLGKNKITEIKNISHLS 210
>gi|452985411|gb|EME85168.1| hypothetical protein MYCFIDRAFT_60080, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 358
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL LTNL L+L I I+GL L L++L L N L+GL+ LTNL+ L +
Sbjct: 175 GLEELTNLTYLELGANRIREIEGLETLTKLDSLWLGQNKI--TELKGLSTLTNLRTLSIQ 232
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ + G+ LP L L + D +T+++ ++ T
Sbjct: 233 ANRLSSLDGIEALPQLTELYISDNKVTSLEPLKACTK 269
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL+ LTNL+ L + ++++ G+ L L L +S N SLE L T L++LD
Sbjct: 219 GLSTLTNLRTLSIQANRLSSLDGIEALPQLTELYISDNKV--TSLEPLKACTKLEILDFQ 276
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
N + +GL +L +L+ + +C I + Q +++
Sbjct: 277 TNPITSLVGLEDLKDLENIWASNCQIDSFQEVER 310
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 13/116 (11%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLD---LDGCGITTIQGLAKLKNLEALDLSS 63
L++LDLS YN + ++ LKKLD I+ I+GL +L NL L+L +
Sbjct: 138 LRILDLS--YNKLKH------IKRVSTLKKLDHLYFVQNRISKIEGLEELTNLTYLELGA 189
Query: 64 NYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
N +EGL LT L L L N+ GL+ L NL+TL ++ ++++ GI+
Sbjct: 190 NRI--REIEGLETLTKLDSLWLGQNKITELKGLSTLTNLRTLSIQANRLSSLDGIE 243
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G+ T L+ LDL + I+ ++ LK L+ L N +EGL LTNL L+L
Sbjct: 131 GVEEYTELRILDLSYNKLKHIKRVSTLKKLDHLYFVQNRI--SKIEGLEELTNLTYLELG 188
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ GL L L +L L IT ++G+ T
Sbjct: 189 ANRIREIEGLETLTKLDSLWLGQNKITELKGLSTLT 224
>gi|296107477|ref|YP_003619178.1| hypothetical protein lpa_02726 [Legionella pneumophila 2300/99
Alcoy]
gi|295649379|gb|ADG25226.1| leucine-rich repeat- and coiled coil-containing protein [Legionella
pneumophila 2300/99 Alcoy]
Length = 553
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 15/111 (13%)
Query: 11 DLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT------IQGLAKLKNLEALDLSSN 64
+LSA+Y + S L+R N LKKL L CG+T + ++LK+L +L N
Sbjct: 133 ELSASYVLFS--LSR----NAAALKKLSLRNCGVTDANLEYLTRPESRLKSLTHFNLRRN 186
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTTLG---LANLPNLKTLDLRDCGI 112
H ++ A+L +L +DLS N + G LA L L+TL L +CGI
Sbjct: 187 NITHQGVDSFAHLQSLTTIDLSQNTGIGDEGVSRLAPLKQLRTLYLDNCGI 237
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI--TTIQGLAKLKNLEA 58
A+L+ L +DLS N I ++R LA L L+ L LD CGI I+ +AK+ NL+
Sbjct: 196 FAHLQSLTTIDLSQNTGIGDEGVSR--LAPLKQLRTLYLDNCGIGGEGIKAIAKM-NLQT 252
Query: 59 LDLSSN 64
+DLS N
Sbjct: 253 VDLSFN 258
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 16/117 (13%)
Query: 7 LQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGIT---TIQGLAKLKNLEALDL 61
L LDLS + T+ L+ L L N+ +K L LD CG+ T++ L+KL +++ L L
Sbjct: 51 LSELDLS-DTRFTNQELSDLVTALNNIPGIKSLRLDSCGLKDSDTVE-LSKLTHIKKLSL 108
Query: 62 SSNY-----YLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
SNY + LE L N + LS + L +L N LK L LR+CG+T
Sbjct: 109 KSNYLKNRPMFNSMLEALYLDYNTE---LSASYVLFSLS-RNAAALKKLSLRNCGVT 161
>gi|109120022|ref|XP_001112935.1| PREDICTED: leucine-rich repeat-containing protein 46-like, partial
[Macaca mulatta]
Length = 112
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
L L+ + LD GITTI+ L LKNL +L L N +E LA + +L+ L L+GNQ
Sbjct: 4 LDELQTVRLDREGITTIKNLEGLKNLHSLYLQGNKI--QQIENLACVPSLRFLSLAGNQI 61
Query: 91 LTTLGLANLPNLKTLDLRDCGITTIQ 116
L +LP L+ LDL + I T++
Sbjct: 62 RQVENLLDLPCLQFLDLSENLIETLK 87
>gi|270001290|gb|EEZ97737.1| tartan/capricious-like protein [Tribolium castaneum]
Length = 1323
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLA-KLKNLEAL 59
+ ++L LDL+ N T S +GL T LK+L L I+TI G L LE L
Sbjct: 433 FQHFQHLSHLDLTRNLLTTLNSDAFVGLE--TTLKELHLPQNKISTITGPTLSLLKLETL 490
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG---LANLPNLKTLDLRDCGITTIQ 116
DLS N+ S L L+ L+LS N +L ++ L LPNL+ DL G+ +
Sbjct: 491 DLSDNHLTELSRNVFGMLPQLRFLNLSHNSHLASIPSNLLHKLPNLEVFDLSYTGLRILT 550
Query: 117 G 117
G
Sbjct: 551 G 551
>gi|315303678|ref|ZP_07874201.1| internalin B [Listeria ivanovii FSL F6-596]
gi|313627952|gb|EFR96562.1| internalin B [Listeria ivanovii FSL F6-596]
Length = 446
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 56/119 (47%), Gaps = 25/119 (21%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHG----------------- 69
G+ LTNL+ L L G IT I LA LK L LDL N LH
Sbjct: 91 GIQYLTNLQVLYLSGNQITDISPLASLKKLAVLDLGKNK-LHDISDIKKIANSNPLSDLL 149
Query: 70 -------SLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
+ LANLTNL+ L L GN+ L +L +L+ LDLR+ + I+G+++
Sbjct: 150 LGDNEITDISPLANLTNLENLSLKGNKLSNIQILPSLTSLEELDLRENQLRDIRGLEKL 208
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 70 SLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
S+EG+ LTNLQVL LSGNQ LA+L L LDL + I I++
Sbjct: 88 SVEGIQYLTNLQVLYLSGNQITDISPLASLKKLAVLDLGKNKLHDISDIKKI 139
>gi|167861924|gb|ACA05661.1| InlA [Listeria monocytogenes]
Length = 800
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLSDLDLANNQIS 286
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLSDLDLANNQISNLAPLSGLTKLTELK 301
>gi|148359431|ref|YP_001250638.1| hypothetical protein LPC_1338 [Legionella pneumophila str. Corby]
gi|148281204|gb|ABQ55292.1| hypothetical protein LPC_1338 [Legionella pneumophila str. Corby]
Length = 553
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 15/111 (13%)
Query: 11 DLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT------IQGLAKLKNLEALDLSSN 64
+LSA+Y + S L+R N LKKL L CG+T + ++LK+L +L N
Sbjct: 133 ELSASYVLFS--LSR----NAAALKKLSLRNCGVTDANLEYLTRPESRLKSLTHFNLRRN 186
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTTLG---LANLPNLKTLDLRDCGI 112
H ++ A+L +L +DLS N + G LA L L+TL L +CGI
Sbjct: 187 NITHQGVDSFAHLQSLTTIDLSQNTGIGDEGVSRLAPLKQLRTLYLDNCGI 237
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI--TTIQGLAKLKNLEA 58
A+L+ L +DLS N I ++R LA L L+ L LD CGI I+ +AK+ NL+
Sbjct: 196 FAHLQSLTTIDLSQNTGIGDEGVSR--LAPLKQLRTLYLDNCGIGGEGIKAIAKM-NLQT 252
Query: 59 LDLSSN 64
+DLS N
Sbjct: 253 VDLSFN 258
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 16/117 (13%)
Query: 7 LQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGIT---TIQGLAKLKNLEALDL 61
L LDLS + T+ L+ L L N+ +K L LD CG+ T++ L+KL +++ L L
Sbjct: 51 LSELDLS-DTRFTNQELSDLVTALNNIPGIKSLRLDSCGLKDSDTVE-LSKLTHIKKLSL 108
Query: 62 SSNY-----YLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
SNY + LE L N + LS + L +L N LK L LR+CG+T
Sbjct: 109 KSNYLKNRPMFNSMLEALYLDYNTE---LSASYVLFSLS-RNAAALKKLSLRNCGVT 161
>gi|255585991|ref|XP_002533665.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis]
gi|223526433|gb|EEF28711.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis]
Length = 743
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 6/67 (8%)
Query: 28 LANLTNLKKLDLDGCGIT----TIQGLAKLKNLEALDLSSNYYLHGSLEG-LANLTNLQV 82
+ LT+LK L L CG+T + QGL +LK+LE LD+S N L G+L LANLT+LQ
Sbjct: 214 IGTLTSLKALSLSKCGLTGTIPSTQGLCELKHLECLDISFN-SLSGNLPWCLANLTSLQQ 272
Query: 83 LDLSGNQ 89
L LS N
Sbjct: 273 LVLSWNH 279
>gi|440717813|ref|ZP_20898289.1| hypothetical protein RBSWK_05349 [Rhodopirellula baltica SWK14]
gi|436437051|gb|ELP30728.1| hypothetical protein RBSWK_05349 [Rhodopirellula baltica SWK14]
Length = 364
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+A+L+ LQ + L AN I S +A L ++ LD+ G +T++ LAK+ NL L
Sbjct: 172 IADLKRLQSVTL-ANNKIASLD----PVAELVAMQLLDVSGNELTSLDPLAKMSNLRTLY 226
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTIQGI 118
++ N SL+ LA LT + LD +GN+ LT+L +A L L TL++ D IT+++ +
Sbjct: 227 VADNKLT--SLDPLAGLTKIWSLDAAGNE-LTSLDPVAKLGWLTTLEISDNKITSLEPL 282
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL + +L +DL I + +A LK L+++ L++N SL+ +A L +Q+LD+S
Sbjct: 149 GLQHCKSLMLIDLADNKIEDLSPIADLKRLQSVTLANNKI--ASLDPVAELVAMQLLDVS 206
Query: 87 GNQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQQFT 122
GN+ LT+L LA + NL+TL + D +T++ + T
Sbjct: 207 GNE-LTSLDPLAKMSNLRTLYVADNKLTSLDPLAGLT 242
>gi|298359724|gb|ADI77441.1| truncated internalin A [Listeria monocytogenes]
gi|298359728|gb|ADI77443.1| truncated internalin A [Listeria monocytogenes]
gi|298359760|gb|ADI77459.1| truncated internalin A [Listeria monocytogenes]
gi|298359768|gb|ADI77463.1| truncated internalin A [Listeria monocytogenes]
gi|298359778|gb|ADI77468.1| truncated internalin A [Listeria monocytogenes]
gi|298359784|gb|ADI77471.1| truncated internalin A [Listeria monocytogenes]
gi|298359796|gb|ADI77477.1| truncated internalin A [Listeria monocytogenes]
gi|298359800|gb|ADI77479.1| truncated internalin A [Listeria monocytogenes]
gi|298359816|gb|ADI77487.1| truncated internalin A [Listeria monocytogenes]
gi|298359840|gb|ADI77499.1| truncated internalin A [Listeria monocytogenes]
gi|298359850|gb|ADI77504.1| truncated internalin A [Listeria monocytogenes]
gi|298359852|gb|ADI77505.1| truncated internalin A [Listeria monocytogenes]
gi|298359860|gb|ADI77509.1| truncated internalin A [Listeria monocytogenes]
gi|298359916|gb|ADI77537.1| truncated internalin A [Listeria monocytogenes]
gi|298359928|gb|ADI77543.1| truncated internalin A [Listeria monocytogenes]
gi|298359936|gb|ADI77547.1| truncated internalin A [Listeria monocytogenes]
gi|298359962|gb|ADI77560.1| truncated internalin A [Listeria monocytogenes]
gi|298359996|gb|ADI77577.1| truncated internalin A [Listeria monocytogenes]
gi|298360016|gb|ADI77587.1| truncated internalin A [Listeria monocytogenes]
gi|298360018|gb|ADI77588.1| truncated internalin A [Listeria monocytogenes]
gi|298360022|gb|ADI77590.1| truncated internalin A [Listeria monocytogenes]
gi|298360024|gb|ADI77591.1| truncated internalin A [Listeria monocytogenes]
gi|298360046|gb|ADI77602.1| truncated internalin A [Listeria monocytogenes]
gi|298360048|gb|ADI77603.1| truncated internalin A [Listeria monocytogenes]
gi|298360058|gb|ADI77608.1| truncated internalin A [Listeria monocytogenes]
gi|298360062|gb|ADI77610.1| truncated internalin A [Listeria monocytogenes]
gi|298360088|gb|ADI77623.1| truncated internalin A [Listeria monocytogenes]
gi|298360120|gb|ADI77639.1| truncated internalin A [Listeria monocytogenes]
gi|298360152|gb|ADI77655.1| truncated internalin A [Listeria monocytogenes]
gi|298360168|gb|ADI77663.1| truncated internalin A [Listeria monocytogenes]
gi|298360204|gb|ADI77681.1| truncated internalin A [Listeria monocytogenes]
gi|298360210|gb|ADI77684.1| truncated internalin A [Listeria monocytogenes]
gi|298360224|gb|ADI77691.1| truncated internalin A [Listeria monocytogenes]
gi|298360248|gb|ADI77703.1| truncated internalin A [Listeria monocytogenes]
gi|298360250|gb|ADI77704.1| truncated internalin A [Listeria monocytogenes]
gi|298360272|gb|ADI77715.1| truncated internalin A [Listeria monocytogenes]
gi|298360308|gb|ADI77733.1| truncated internalin A [Listeria monocytogenes]
gi|298360340|gb|ADI77749.1| truncated internalin A [Listeria monocytogenes]
gi|298360382|gb|ADI77770.1| truncated internalin A [Listeria monocytogenes]
gi|298360392|gb|ADI77775.1| truncated internalin A [Listeria monocytogenes]
gi|298360408|gb|ADI77783.1| truncated internalin A [Listeria monocytogenes]
gi|298360418|gb|ADI77788.1| truncated internalin A [Listeria monocytogenes]
gi|298360430|gb|ADI77794.1| truncated internalin A [Listeria monocytogenes]
gi|298360438|gb|ADI77798.1| truncated internalin A [Listeria monocytogenes]
gi|298360444|gb|ADI77801.1| truncated internalin A [Listeria monocytogenes]
gi|298360446|gb|ADI77802.1| truncated internalin A [Listeria monocytogenes]
gi|298360476|gb|ADI77817.1| truncated internalin A [Listeria monocytogenes]
gi|298360482|gb|ADI77820.1| truncated internalin A [Listeria monocytogenes]
gi|298360484|gb|ADI77821.1| truncated internalin A [Listeria monocytogenes]
gi|298360486|gb|ADI77822.1| truncated internalin A [Listeria monocytogenes]
gi|298360490|gb|ADI77824.1| truncated internalin A [Listeria monocytogenes]
gi|298360512|gb|ADI77835.1| truncated internalin A [Listeria monocytogenes]
gi|298360526|gb|ADI77842.1| truncated internalin A [Listeria monocytogenes]
gi|298360534|gb|ADI77846.1| truncated internalin A [Listeria monocytogenes]
gi|298360574|gb|ADI77866.1| truncated internalin A [Listeria monocytogenes]
gi|298360584|gb|ADI77871.1| truncated internalin A [Listeria monocytogenes]
gi|298360618|gb|ADI77888.1| truncated internalin A [Listeria monocytogenes]
gi|298360622|gb|ADI77890.1| truncated internalin A [Listeria monocytogenes]
gi|298360626|gb|ADI77892.1| truncated internalin A [Listeria monocytogenes]
gi|298360628|gb|ADI77893.1| truncated internalin A [Listeria monocytogenes]
gi|298360646|gb|ADI77902.1| truncated internalin A [Listeria monocytogenes]
gi|298360650|gb|ADI77904.1| truncated internalin A [Listeria monocytogenes]
gi|298360664|gb|ADI77911.1| truncated internalin A [Listeria monocytogenes]
gi|298360686|gb|ADI77922.1| truncated internalin A [Listeria monocytogenes]
gi|298360702|gb|ADI77930.1| truncated internalin A [Listeria monocytogenes]
gi|298360718|gb|ADI77938.1| truncated internalin A [Listeria monocytogenes]
gi|443428870|gb|AGC92234.1| truncated internalin A [Listeria monocytogenes]
Length = 605
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|298359764|gb|ADI77461.1| truncated internalin A [Listeria monocytogenes]
gi|298359862|gb|ADI77510.1| truncated internalin A [Listeria monocytogenes]
gi|298360070|gb|ADI77614.1| truncated internalin A [Listeria monocytogenes]
gi|298360108|gb|ADI77633.1| truncated internalin A [Listeria monocytogenes]
gi|298360174|gb|ADI77666.1| truncated internalin A [Listeria monocytogenes]
gi|298360196|gb|ADI77677.1| truncated internalin A [Listeria monocytogenes]
gi|298360268|gb|ADI77713.1| truncated internalin A [Listeria monocytogenes]
gi|298360290|gb|ADI77724.1| truncated internalin A [Listeria monocytogenes]
gi|298360536|gb|ADI77847.1| truncated internalin A [Listeria monocytogenes]
gi|298360608|gb|ADI77883.1| truncated internalin A [Listeria monocytogenes]
gi|298360658|gb|ADI77908.1| truncated internalin A [Listeria monocytogenes]
gi|298360684|gb|ADI77921.1| truncated internalin A [Listeria monocytogenes]
Length = 605
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTGLK 301
>gi|112959522|gb|ABI27288.1| truncated internalin A [Listeria monocytogenes]
Length = 538
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 136 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 193
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 194 NQ-LKDIGTLASLTNLTDLDLANNQIS 219
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 71 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 127
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 128 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 162
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 93 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 149
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 150 NKVSDISVLAKLTNLESL 167
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 136 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 190
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 191 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 234
>gi|387818188|ref|YP_005678533.1| internalin A (LPXTG motif) [Clostridium botulinum H04402 065]
gi|322806230|emb|CBZ03798.1| internalin A (LPXTG motif) [Clostridium botulinum H04402 065]
Length = 331
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
++ L NL+ L++ C + + + LK L+ LD+S+N +LEG+ NLTNL+ L +S
Sbjct: 141 ISTLKNLENLEIIDCNLNDVSIVKNLKQLKRLDISNNQI--SNLEGIGNLTNLKELYMSN 198
Query: 88 NQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N N+T + + L L LD+ D I TI+ ++ S
Sbjct: 199 N-NITNIEPMCGLLKLTNLDISDNKINTIKELKNVKS 234
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 10/121 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL L+++D N+ S+ + NL LK+LD+ I+ ++G+ L NL+ L
Sbjct: 144 LKNLENLEIIDC----NLNDVSIVK----NLKQLKRLDISNNQISNLEGIGNLTNLKELY 195
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+S+N + +E + L L LD+S N+ T L N+ ++K L++ + I+ ++GI+
Sbjct: 196 MSNNNITN--IEPMCGLLKLTNLDISDNKINTIKELKNVKSIKELNICNNNISDLEGIEN 253
Query: 121 F 121
Sbjct: 254 M 254
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 33 NLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLT 92
N+K L + C I ++ ++ LKNLE L++ S+ + NL L+ LD+S NQ
Sbjct: 124 NIKTLKIVHCNIKDLEIISTLKNLENLEIIDCNLNDVSI--VKNLKQLKRLDISNNQISN 181
Query: 93 TLGLANLPNLKTLDLRDCGITTIQGI 118
G+ NL NLK L + + IT I+ +
Sbjct: 182 LEGIGNLTNLKELYMSNNNITNIEPM 207
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 61/107 (57%), Gaps = 11/107 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+ NL+ L+ LD+S N ++ L G+ NLTNLK+L + IT I+ + L L L
Sbjct: 163 VKNLKQLKRLDISNNQ------ISNLEGIGNLTNLKELYMSNNNITNIEPMCGLLKLTNL 216
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTL 105
D+S N +++ L N+ +++ L++ N N++ L G+ N+ L +L
Sbjct: 217 DISDNKI--NTIKELKNVKSIKELNICNN-NISDLEGIENMKQLISL 260
>gi|294358393|gb|ADE73849.1| InlA [Listeria monocytogenes]
Length = 800
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKEIGTLASLTNLTDLDLANNQIS 286
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQLKE--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|297745044|emb|CBI38636.3| unnamed protein product [Vitis vinifera]
Length = 813
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 63/150 (42%), Gaps = 33/150 (22%)
Query: 1 LANLRYLQVLDLSAN-YNITSGSLTRLGLANLTNLKKLDLDGCGITTI--QGLAKLKNLE 57
L +L +L+ LDLS N +N + G+ L+ L+ LD+ C T + L L L
Sbjct: 247 LFSLVHLRRLDLSDNDFNYSE---IPFGVGQLSRLRMLDISSCNFTGLVPSPLGHLPQLS 303
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGN-------------QNLTTLGLA------- 97
LDLS+NY+ +ANLT L LDLS N +NLT L+
Sbjct: 304 YLDLSNNYFSGQIPSFMANLTQLTYLDLSFNNFSGIPSSLFELLKNLTDFQLSGNRLSVL 363
Query: 98 -------NLPNLKTLDLRDCGITTIQGIQQ 120
LP K L L C +T Q
Sbjct: 364 SYTRTNVTLPKFKLLGLGSCNLTEFPDFLQ 393
>gi|423620804|ref|ZP_17596614.1| hypothetical protein IIO_06106, partial [Bacillus cereus VD115]
gi|401246251|gb|EJR52600.1| hypothetical protein IIO_06106, partial [Bacillus cereus VD115]
Length = 851
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL ++TNL+KL L +T I ++KL++L+ +DL+SN ++ + L N+ +L L
Sbjct: 236 GLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPI--KNIHPIEQLENINMLFLR 293
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQ 116
N+ L+ + +KTLDL I IQ
Sbjct: 294 DNKISDLTPLSKMKKIKTLDLVGNNIEDIQ 323
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL + NL+ L L+G G+ I+ ++ LK L +++S N + L++L N+Q L+L+
Sbjct: 584 GLEYMKNLENLTLEGVGLKNIEFISNLKQLNIVNVSHNQI--EDITPLSSLKNVQWLNLA 641
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
N + ++ +L +L+L I ++ + Q +
Sbjct: 642 DNHIKDVTVIGSMLDLLSLNLAGNEIRDVRPLIQLGQW 679
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
++ ++NL +L++ I I L+KL L+ L+L NY + L+NLT+L ++L
Sbjct: 369 ISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYI--SDISPLSNLTDLHEMNLGA 426
Query: 88 NQ 89
N+
Sbjct: 427 NE 428
>gi|289435967|ref|YP_003465839.1| hypothetical protein lse_2606 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289172211|emb|CBH28757.1| secreted protein, putative [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 600
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 18 ITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLAN 76
+TS LT + LANLTNL L L ++ + L+ NLE L L S L + +AN
Sbjct: 171 LTSYDLTDVSELANLTNLTNLWLSSPKLSNVSVLSNFHNLETLQLRST--LVSDITPIAN 228
Query: 77 LTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
L L++LD+S N+ L+ L NL L L D I+ I + + T
Sbjct: 229 LKKLKLLDVSMNEIKDISSLSELSNLTELTLTDNHISDISALSELT 274
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 3 NLRYLQVLDLSANY---NITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
N+R +Q L+ N N+ LT + L+NLTNL KL L I + LA L NL
Sbjct: 109 NIRDIQPLENLTNLTVLNMIDNELTDISPLSNLTNLTKLSLGDDSIIDVSPLAGLTNLIN 168
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
L L+S Y + LANLTNL L LS + L+N NL+TL LR ++ I I
Sbjct: 169 LYLTS--YDLTDVSELANLTNLTNLWLSSPKLSNVSVLSNFHNLETLQLRSTLVSDITPI 226
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
+ANL LK LD+ I I L++L NL L L+ N+ + L+ LTNL L L
Sbjct: 226 IANLKKLKLLDVSMNEIKDISSLSELSNLTELTLTDNHI--SDISALSELTNLNYLYLDV 283
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGIT 113
NQ LA+L NL+ L + D IT
Sbjct: 284 NQISDISALADLSNLEELYVMDQTIT 309
>gi|149037520|gb|EDL91951.1| protein phosphatase 1, regulatory (inhibitor) subunit 7, isoform
CRA_b [Rattus norvegicus]
Length = 317
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 33/143 (23%)
Query: 1 LANLRYLQVLDLSAN--YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L L L+VLD+S N NI G+ LT LKKL L I I+ ++ L+ L+
Sbjct: 95 LEALTELEVLDISFNLLRNIE-------GIDKLTQLKKLFLVNNKINKIENISTLQQLQM 147
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ-----------NLTTL-----------GL 96
L+L SN ++E + LTNL+ L L N+ NLT L GL
Sbjct: 148 LELGSNRI--RAIENIDTLTNLESLFLGKNKITKLQNLDALSNLTVLSMQSNRLTKIEGL 205
Query: 97 ANLPNLKTLDLRDCGITTIQGIQ 119
NL NL+ L L GI I+G++
Sbjct: 206 QNLVNLRELYLSHNGIEVIEGLE 228
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
++ L+ LQ+L+L +N I + + LTNL+ L L IT +Q L L NL L
Sbjct: 139 ISTLQQLQMLELGSN-RIRAIE----NIDTLTNLESLFLGKNKITKLQNLDALSNLTVLS 193
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+ SN +EGL NL NL+ L LS N GL N L LD+ I I+ I
Sbjct: 194 MQSNRL--TKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISH 251
Query: 121 FTS 123
T
Sbjct: 252 LTE 254
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 7 LQVLDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
LQ LD +N + S RL GL NL NL++L L GI I+GL L LD++
Sbjct: 180 LQNLDALSNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIA 239
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGN 88
SN +E +++LT LQ ++ N
Sbjct: 240 SNRI--KKIENISHLTELQEFWMNDN 263
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L L +L++LDL I I+ L L LE LD+S N L ++EG+ LT L+ L L
Sbjct: 73 LDELQSLRELDLYDNQIKKIENLEALTELEVLDISFN--LLRNIEGIDKLTQLKKLFLVN 130
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ ++ L L+ L+L I I+ I T
Sbjct: 131 NKINKIENISTLQQLQMLELGSNRIRAIENIDTLT 165
>gi|390333510|ref|XP_784143.3| PREDICTED: leucine-rich repeat-containing protein 9-like isoform 3
[Strongylocentrotus purpuratus]
Length = 1505
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Query: 17 NITSGSLTRLG-LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
N+ S +++L L L NL+ + +T I+GL +E L L N +EG++
Sbjct: 908 NLDSQHISKLSNLERLVNLRWASFNDNDLTKIEGLENCSQIEELSLEDNCIY--RIEGIS 965
Query: 76 NLTNLQVLDLSGNQNLTTL---GLANLPNLKTLDLRDCGITTIQGIQQFTS 123
+L+ L L+L G NL+TL GL L +L+ L + D I+T+ G+ + TS
Sbjct: 966 HLSKLHTLNL-GTNNLSTLENAGLDKLVHLQCLSVEDNRISTLAGLDKVTS 1015
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
++L ++ L+L G G+T ++ L + L+ L +S N LE +A++ NL+ LD S N
Sbjct: 704 SSLASITVLNLHGNGLTKLKHLNSMTALQRLIVSFNEL--SRLEDVAHMANLEYLDASFN 761
Query: 89 QNLTTLGLANLPNLKTLDL 107
+ T G+ L LKTLDL
Sbjct: 762 KIYTLDGMKALGKLKTLDL 780
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 12/117 (10%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI---QGLAKLKNLEALDLSS 63
L+ ++L N N+TS S GL L NL+ L L+ + TI +K ++ D
Sbjct: 1134 LRSVNLEHN-NLTSFS----GLIYLVNLRVLCLNHNHVETILQRPKASKGSKVDKEDHLD 1188
Query: 64 NYYLHGSLEGLANLTNLQVLDL--SGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
++++ G+L + L NL+VL L +G +L L ++ LP+LK L L+ I+ ++G+
Sbjct: 1189 HHFMPGTLTPI--LDNLEVLHLGYNGISDLNKLEMSRLPSLKALFLQGNDISKVEGM 1243
>gi|91091760|ref|XP_968875.1| PREDICTED: similar to GA20668-PA [Tribolium castaneum]
Length = 1337
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLA-KLKNLEAL 59
+ ++L LDL+ N T S +GL T LK+L L I+TI G L LE L
Sbjct: 447 FQHFQHLSHLDLTRNLLTTLNSDAFVGLE--TTLKELHLPQNKISTITGPTLSLLKLETL 504
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG---LANLPNLKTLDLRDCGITTIQ 116
DLS N+ S L L+ L+LS N +L ++ L LPNL+ DL G+ +
Sbjct: 505 DLSDNHLTELSRNVFGMLPQLRFLNLSHNSHLASIPSNLLHKLPNLEVFDLSYTGLRILT 564
Query: 117 G 117
G
Sbjct: 565 G 565
>gi|332710873|ref|ZP_08430810.1| Leucine Rich Repeat, Miro-like protein [Moorea producens 3L]
gi|332350426|gb|EGJ30029.1| Leucine Rich Repeat, Miro-like protein [Moorea producens 3L]
Length = 868
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 7/119 (5%)
Query: 2 ANLRYLQVLDLSANYNITSGSLTRLGLA--NLTNLKKLDLDGCGITTI-QGLAKLKNLEA 58
A + L+ L LS LT + + NL+ L++LDL +TT+ + + KL NL
Sbjct: 14 AKEKQLKHLYLSNTVIFDDDQLTEIPIEVFNLSQLEELDLSDNKLTTVPESIGKLTNLTQ 73
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL--GLANLPNLKTLDLRDCGITTI 115
LDLS N L E + LTNL LDLSGN+ LTT+ L L L LDL +TT+
Sbjct: 74 LDLSINK-LTTVPESIGKLTNLTQLDLSGNE-LTTVPESLTKLTQLTQLDLSVNELTTV 130
>gi|112961640|gb|ABI28446.1| truncated internalin A [Listeria monocytogenes]
gi|112961643|gb|ABI28448.1| truncated internalin A [Listeria monocytogenes]
gi|112961661|gb|ABI28460.1| truncated internalin A [Listeria monocytogenes]
Length = 556
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 154 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 211
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 212 NQ-LKDIGTLASLTNLTDLDLANNQIS 237
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 89 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 145
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 146 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 180
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 111 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 167
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 168 NKVSDISVLAKLTNLESL 185
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 154 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 208
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 209 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 252
>gi|112959440|gb|ABI27247.1| truncated internalin A [Listeria monocytogenes]
gi|112959442|gb|ABI27248.1| truncated internalin A [Listeria monocytogenes]
gi|112959448|gb|ABI27251.1| truncated internalin A [Listeria monocytogenes]
gi|112959454|gb|ABI27254.1| truncated internalin A [Listeria monocytogenes]
gi|112959458|gb|ABI27256.1| truncated internalin A [Listeria monocytogenes]
gi|112959460|gb|ABI27257.1| truncated internalin A [Listeria monocytogenes]
gi|112959462|gb|ABI27258.1| truncated internalin A [Listeria monocytogenes]
gi|112959472|gb|ABI27263.1| truncated internalin A [Listeria monocytogenes]
gi|112959480|gb|ABI27267.1| truncated internalin A [Listeria monocytogenes]
gi|112959482|gb|ABI27268.1| truncated internalin A [Listeria monocytogenes]
gi|112959488|gb|ABI27271.1| truncated internalin A [Listeria monocytogenes]
gi|112959514|gb|ABI27284.1| truncated internalin A [Listeria monocytogenes]
gi|112959538|gb|ABI27296.1| truncated internalin A [Listeria monocytogenes]
gi|112959542|gb|ABI27298.1| truncated internalin A [Listeria monocytogenes]
gi|112959548|gb|ABI27301.1| truncated internalin A [Listeria monocytogenes]
Length = 542
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 140 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 197
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 198 NQ-LKDIGTLASLTNLTDLDLANNQIS 223
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 75 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 131
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 132 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 166
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 97 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 153
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 154 NKVSDISVLAKLTNLESL 171
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 140 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 194
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 195 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 238
>gi|52842108|ref|YP_095907.1| hypothetical protein lpg1890 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378777743|ref|YP_005186181.1| hypothetical protein lp12_1829 [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|52629219|gb|AAU27960.1| leucine-rich repeat- and coiled coil-containing protein [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|364508558|gb|AEW52082.1| leucine-rich repeat- and coiled coil-containing protein [Legionella
pneumophila subsp. pneumophila ATCC 43290]
Length = 573
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 15/111 (13%)
Query: 11 DLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT------IQGLAKLKNLEALDLSSN 64
+LSA+Y + S L+R N LKKL L CG+T + ++LK+L +L N
Sbjct: 153 ELSASYVLFS--LSR----NAAALKKLSLRNCGVTDANLEYLTRPESRLKSLTHFNLRRN 206
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTTLG---LANLPNLKTLDLRDCGI 112
H ++ A+L +L +DLS N + G LA L L+TL L +CGI
Sbjct: 207 NITHQGVDSFAHLQSLTTIDLSQNTGIGDEGVSRLAPLKQLRTLYLDNCGI 257
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGI--TTIQGLAKLKNLEA 58
A+L+ L +DLS N I ++R LA L L+ L LD CGI I+ +AK+ NL+
Sbjct: 216 FAHLQSLTTIDLSQNTGIGDEGVSR--LAPLKQLRTLYLDNCGIGGEGIKAIAKM-NLQT 272
Query: 59 LDLSSN 64
+DLS N
Sbjct: 273 VDLSFN 278
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 16/117 (13%)
Query: 7 LQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGIT---TIQGLAKLKNLEALDL 61
L LDLS + T+ L+ L L N+ +K L LD CG+ T++ L+KL +++ L L
Sbjct: 71 LSELDLS-DTRFTNQELSDLVTALNNIPGIKSLRLDSCGLKDSDTVE-LSKLTHIKKLSL 128
Query: 62 SSNY-----YLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
SNY + LE L N + LS + L +L N LK L LR+CG+T
Sbjct: 129 KSNYLKNRPMFNSMLEALYLDYNTE---LSASYVLFSLS-RNAAALKKLSLRNCGVT 181
>gi|452000654|gb|EMD93115.1| hypothetical protein COCHEDRAFT_1172996 [Cochliobolus
heterostrophus C5]
Length = 382
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL LTNLK L + + +I GL KL NLE L +S N L + GL N NL V+D+S
Sbjct: 243 GLDTLTNLKILSIQSNRLRSITGLEKLVNLEELHVSHN--LLTEISGLENNVNLSVIDIS 300
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
N GL L +L +C ++ I+Q
Sbjct: 301 ANPIEHLGGLKGLKHLTEFWASNCKLSDFGEIEQ 334
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LTNL++++L + IQGL L LE L L N ++GL LTNL++L +
Sbjct: 200 LEGLTNLRQIELGANRVREIQGLETLTGLEELWLGKNKI--TEIKGLDTLTNLKILSIQS 257
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
N+ + GL L NL+ L + +T I G++
Sbjct: 258 NRLRSITGLEKLVNLEELHVSHNLLTEISGLE 289
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL LT L++L L IT I+GL L NL+ L + SN S+ GL L NL+ L +S
Sbjct: 221 GLETLTGLEELWLGKNKITEIKGLDTLTNLKILSIQSNRL--RSITGLEKLVNLEELHVS 278
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITT---IQGIQQFTSY 124
N GL N NL +D+ I ++G++ T +
Sbjct: 279 HNLLTEISGLENNVNLSVIDISANPIEHLGGLKGLKHLTEF 319
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL T L LDL I I+ L + L+ L N G++E L LTNL+ ++L
Sbjct: 155 GLDAFTELTSLDLSFNKIKHIKRLNHMTKLKDLYFVQNKI--GTIENLEGLTNLRQIELG 212
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ GL L L+ L L IT I+G+ T
Sbjct: 213 ANRVREIQGLETLTGLEELWLGKNKITEIKGLDTLT 248
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L ++T LK L I TI+ L L NL ++L +N ++GL LT L+ L L
Sbjct: 178 LNHMTKLKDLYFVQNKIGTIENLEGLTNLRQIELGANRV--REIQGLETLTGLEELWLGK 235
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ GL L NLK L ++ + +I G+++
Sbjct: 236 NKITEIKGLDTLTNLKILSIQSNRLRSITGLEKLV 270
>gi|423444670|ref|ZP_17421575.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG4X2-1]
gi|402410192|gb|EJV42597.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG4X2-1]
Length = 828
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL ++TNL+KL L +T I ++KL++L+ +DL+SN ++ + L N+ +L L
Sbjct: 236 GLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPI--KNIHPIEQLENINMLFLR 293
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQ 116
N+ L+ + +KTLDL I IQ
Sbjct: 294 DNKISDLTPLSKMKKIKTLDLVGNNIEDIQ 323
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+ L L+G G+ I+ ++ LK L +++S N + L++L NLQ L+L+
Sbjct: 535 GLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSHNQI--EDITPLSSLKNLQWLNLA 592
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
N + ++ +L +L+L I ++ + Q +
Sbjct: 593 DNHIKDVTVIGSMLDLLSLNLAGNEICDVRPLIQLGQW 630
>gi|449486564|ref|XP_004157333.1| PREDICTED: probable leucine-rich repeat receptor-like protein
kinase At1g35710-like [Cucumis sativus]
Length = 227
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 10/114 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDL-DGCGITTIQGLAKLK----N 55
L NLR L+ L L N N SG + L L NL++LDL + + TI+ L +L+ +
Sbjct: 66 LVNLRELRYLHL--NENRLSGKIPP-ELGTLPNLRQLDLGNNHLVGTIRELIRLEGCFPS 122
Query: 56 LEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDL 107
L L +++NY+ G LANLTNL++L LS N+ + G+A++P L L L
Sbjct: 123 LRNLYINNNYFTGGVPSQLANLTNLEILYLSYNKMSGIIPPGVAHIPKLTYLYL 176
>gi|434389272|ref|YP_007099883.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
PCC 6605]
gi|428020262|gb|AFY96356.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
PCC 6605]
Length = 287
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
L + KKL +DG I+ ++ LA L NL +L L N L L+ L++L NL+ L L N+
Sbjct: 78 LASQKKLSIDGRKISDLRPLASLTNLTSLSLRFNDEL-ADLQPLSSLKNLEELYLDDNKI 136
Query: 91 LTTLGLANLPNLKTLDL 107
+ LANLP LK L L
Sbjct: 137 VDVRPLANLPKLKNLSL 153
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 44 ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLK 103
+T++Q L+ L NL+ L +S++ L L+ L NLQVL L GN+ LA L LK
Sbjct: 184 MTSLQDLSNLVNLQTLGVSASKV--SDLTPLSKLRNLQVLVLPGNKIRDITPLAKLTKLK 241
Query: 104 TLDLRDCGITTIQGIQQFTS 123
+DL + +T IQ + + S
Sbjct: 242 KIDLLNNQVTNIQSLSKLKS 261
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 38/66 (57%), Gaps = 9/66 (13%)
Query: 1 LANLRYLQVLDLSAN--YNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L+ LR LQVL L N +IT LA LT LKK+DL +T IQ L+KLK+L +
Sbjct: 212 LSKLRNLQVLVLPGNKIRDIT-------PLAKLTKLKKIDLLNNQVTNIQSLSKLKSLTS 264
Query: 59 LDLSSN 64
L L N
Sbjct: 265 LRLYGN 270
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L+NL NL+ L + ++ + L+KL+NL+ L L N + LA LT L+ +DL
Sbjct: 190 LSNLVNLQTLGVSASKVSDLTPLSKLRNLQVLVLPGNKI--RDITPLAKLTKLKKIDLLN 247
Query: 88 NQNLTTLGLANLPNLKTLDL 107
NQ L+ L +L +L L
Sbjct: 248 NQVTNIQSLSKLKSLTSLRL 267
>gi|241951250|ref|XP_002418347.1| leucine-ruch repeat protein, hypothetical; protein phosphatase 1
regulatory subunit, putative [Candida dubliniensis CD36]
gi|223641686|emb|CAX43647.1| leucine-ruch repeat protein, hypothetical [Candida dubliniensis
CD36]
Length = 373
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LT + L+L G I I+ L KL N+ L L N +H L+ + NL NL+VL +
Sbjct: 191 LDTLTKVTNLELGGNKIEVIENLDKLVNINQLWLGKNR-IH-KLQNMDNLVNLRVLSIQS 248
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ GL NL NL+ L L GI+ I+ ++ T+
Sbjct: 249 NRITKIEGLENLKNLEELYLSHNGISEIENLENNTN 284
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 16/108 (14%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L NLR L +I S +T++ GL NL NL++L L GI+ I+ L NL+ L
Sbjct: 238 LVNLRVL---------SIQSNRITKIEGLENLKNLEELYLSHNGISEIENLENNTNLQVL 288
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLG--LANLPNLK 103
D+++N +L+GL++L L S NQ + +G L LP+L+
Sbjct: 289 DVTANKI--TNLKGLSHLVKLTDFWCSYNQVSSFEEIGKELGKLPDLE 334
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L L N+ +L L I +Q + L NL L + SN +EGL NL NL+ L LS
Sbjct: 213 LDKLVNINQLWLGKNRIHKLQNMDNLVNLRVLSIQSNRI--TKIEGLENLKNLEELYLSH 270
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N L N NL+ LD+ IT ++G+
Sbjct: 271 NGISEIENLENNTNLQVLDVTANKITNLKGLSHLVK 306
>gi|193883420|gb|ACF28190.1| hypothetical protein CG12283, partial [Drosophila melanogaster]
Length = 192
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSSNY 65
QVLD+S N + + S + ANL NL+KL L C I I+ L NL LDLS N
Sbjct: 81 QVLDMSGN-KLQTLSNEQFIRANLLNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNL 139
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITT 114
+ L ++ +L+ L L+ N + + N P+L LDL C I T
Sbjct: 140 LVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNTPSLHKLDLSHCDIQT 190
>gi|112959444|gb|ABI27249.1| truncated internalin A [Listeria monocytogenes]
gi|112959490|gb|ABI27272.1| truncated internalin A [Listeria monocytogenes]
Length = 542
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 140 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 197
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 198 NQ-LKDIGTLASLTNLTDLDLANNQIS 223
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 75 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 131
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 132 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 166
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 97 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 153
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 154 NKVSDISVLAKLTNLESL 171
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 140 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 194
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 195 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTGLK 238
>gi|440904209|gb|ELR54748.1| Leucine-rich repeat-containing protein 46, partial [Bos grunniens
mutus]
Length = 321
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
L L+ + LD GITTI+ L L+NL +L L N +E LA + +L+ L L+GNQ
Sbjct: 41 LAELQTVRLDREGITTIRNLEGLQNLHSLYLQGNKIQR--IENLACVPSLRFLSLAGNQI 98
Query: 91 LTTLGLANLPNLKTLDLRDCGITTIQ 116
L +LP+L+ LDL + I T++
Sbjct: 99 RQVENLRDLPHLQFLDLSENLIETLK 124
>gi|376264514|ref|YP_005117226.1| internalin [Bacillus cereus F837/76]
gi|364510314|gb|AEW53713.1| internalin, putative [Bacillus cereus F837/76]
Length = 1098
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
Query: 3 NLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLS 62
+L+ ++ L++ A I S GL + NL+++ + G + I +++LK L+ +DLS
Sbjct: 212 DLKEIKELNIYAGQGIESLK----GLEYMENLERITIQGSDVRNIAPISQLKRLKVVDLS 267
Query: 63 SNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N ++E L NL L +L+L N+ L+ L ++T++L I+ I+ + +
Sbjct: 268 FNKI--ENVEPLVNLEKLDILELQNNRIADVTPLSQLKKVRTINLSGNKISDIKPLYNVS 325
Query: 123 S 123
S
Sbjct: 326 S 326
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 31/139 (22%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
+++LR L+ +DLS N +I L +L +L+KL++ GI + L K++ L+
Sbjct: 601 ISSLRNLKSVDLSYNQIEDIKP-------LHSLEDLEKLNVSDNGIKNVPELFKMQKLKT 653
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLG--------------------L 96
LDLS+N + +L+G+ L NL L ++ N+ NL + L
Sbjct: 654 LDLSNNKLDNAALDGIHQLENLDTLLVNNNEINNLDEISKVSKLNKLEMMSNKVRDISPL 713
Query: 97 ANLPNLKTLDLRDCGITTI 115
A+L NL+ L+L D I I
Sbjct: 714 ASLKNLQWLNLSDNKIQDI 732
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TN+++L L + ++ ++ L+NL+++DLS N ++ L +L +L+ L++S
Sbjct: 578 GLEFMTNMEELTLQNVNMKNVEFISSLRNLKSVDLSYNQI--EDIKPLHSLEDLEKLNVS 635
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGI--TTIQGIQQF 121
N L + LKTLDL + + + GI Q
Sbjct: 636 DNGIKNVPELFKMQKLKTLDLSNNKLDNAALDGIHQL 672
Score = 38.5 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 23 LTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQV 82
+T+ L + LK D GIT GL + N+E L L N + ++E +++L NL+
Sbjct: 552 ITKEDLLTVKALKITDGKKEGITDFSGLEFMTNMEELTL-QNVNMK-NVEFISSLRNLKS 609
Query: 83 LDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+DLS NQ L +L +L+ L++ D GI +
Sbjct: 610 VDLSYNQIEDIKPLHSLEDLEKLNVSDNGIKNV 642
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 23/140 (16%)
Query: 1 LANLRYLQVLDLSAN--------YNITSGSLTRL-----------GLANLTNLKKLDLDG 41
L+ L+ ++ ++LS N YN++S L +L G+ L L L +
Sbjct: 299 LSQLKKVRTINLSGNKISDIKPLYNVSS--LRKLYVSNNKITDFTGIEQLNKLGTLGVGS 356
Query: 42 CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
G+ I+ ++++ + L+L N + L+ LT LQ L+L N L+NL N
Sbjct: 357 NGLVNIEPISQMSGIVELNLEKNDI--KDITSLSKLTGLQSLNLEENYVSDVSSLSNLIN 414
Query: 102 LKTLDLRDCGITTIQGIQQF 121
L L L I I+ IQ+
Sbjct: 415 LYELKLATNEIRDIRPIQEL 434
>gi|187779419|ref|ZP_02995892.1| hypothetical protein CLOSPO_03015 [Clostridium sporogenes ATCC
15579]
gi|187773044|gb|EDU36846.1| leucine Rich Repeat protein [Clostridium sporogenes ATCC 15579]
Length = 334
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
++ L NL+ L++ C + + + LK L+ LD+S+N G+L+G+ NLTNL+ L +S
Sbjct: 144 ISTLKNLENLEIIDCNLNDVSIVKNLKQLKRLDISNNQI--GNLKGIENLTNLKELYMSN 201
Query: 88 NQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N N+T + + +L L LD+ D I I+ ++ S
Sbjct: 202 N-NITNIEPMCSLLKLTNLDISDNKINNIKELKNMKS 237
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 10/121 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL L+++D N+ S+ + NL LK+LD+ I ++G+ L NL+ L
Sbjct: 147 LKNLENLEIIDC----NLNDVSIVK----NLKQLKRLDISNNQIGNLKGIENLTNLKELY 198
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
+S+N + +E + +L L LD+S N+ L N+ ++K L++ + I++++GI+
Sbjct: 199 MSNNNITN--IEPMCSLLKLTNLDISDNKINNIKELKNMKSIKELNICNNNISSLEGIEN 256
Query: 121 F 121
Sbjct: 257 M 257
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 33 NLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLT 92
N+K L + C I ++ ++ LKNLE L++ S+ + NL L+ LD+S NQ
Sbjct: 127 NIKTLKIVHCNIKDLEIISTLKNLENLEIIDCNLNDVSI--VKNLKQLKRLDISNNQIGN 184
Query: 93 TLGLANLPNLKTLDLRDCGITTIQGI 118
G+ NL NLK L + + IT I+ +
Sbjct: 185 LKGIENLTNLKELYMSNNNITNIEPM 210
>gi|112961667|gb|ABI28464.1| truncated internalin A [Listeria monocytogenes]
Length = 556
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 154 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 211
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 212 NQ-LKDIGTLASLTNLTDLDLANNQIS 237
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 89 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 145
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 146 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 180
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 111 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVT---DLKPLANLTTLERLDISS 167
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 168 NKVSDISVLAKLTNLESL 185
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 154 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 208
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 209 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTGLK 252
>gi|887868|gb|AAA69533.1| internalin, partial [Listeria monocytogenes]
Length = 344
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L L G
Sbjct: 64 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSL-G 120
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 121 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 155
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTN L L+G
Sbjct: 129 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNWDELSLNG 186
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L +G LA+L NL LDL + I+ + + T
Sbjct: 187 NQ-LKDIGTLASLTNLTDLDLANNQISNLAPLPGLT 221
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L L + L+ LANLT L+ LD+S
Sbjct: 86 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSLGNQVT---DLKPLANLTTLERLDISS 142
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
N+ LA L NL++L + I+ I + T++
Sbjct: 143 NKVSDISVLAKLTNLESLIATNNQISDITPLGILTNW 179
>gi|68469629|ref|XP_721066.1| hypothetical protein CaO19.8440 [Candida albicans SC5314]
gi|68469868|ref|XP_720944.1| hypothetical protein CaO19.820 [Candida albicans SC5314]
gi|46442838|gb|EAL02124.1| hypothetical protein CaO19.820 [Candida albicans SC5314]
gi|46442967|gb|EAL02252.1| hypothetical protein CaO19.8440 [Candida albicans SC5314]
Length = 374
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LT + L+L G I I+ L KL N++ L L N L+ + NL NL+VL +
Sbjct: 192 LDTLTKVTNLELGGNKIEVIENLDKLVNIKQLWLGKNRIY--KLQNMDNLVNLRVLSIQS 249
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
N+ GL NL NL+ L L GI+ I+ ++
Sbjct: 250 NRITKIEGLENLKNLEELYLSHNGISEIENLE 281
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 16/108 (14%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L NLR L +I S +T++ GL NL NL++L L GI+ I+ L NL+ L
Sbjct: 239 LVNLRVL---------SIQSNRITKIEGLENLKNLEELYLSHNGISEIENLENNINLQVL 289
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLG--LANLPNLK 103
D+++N +L+GL++L L S NQ + +G L LP+L+
Sbjct: 290 DVTANKI--SNLKGLSHLVKLTDFWCSYNQVSSFEEIGKELGKLPDLE 335
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L L N+K+L L I +Q + L NL L + SN +EGL NL NL+ L LS
Sbjct: 214 LDKLVNIKQLWLGKNRIYKLQNMDNLVNLRVLSIQSNRI--TKIEGLENLKNLEELYLSH 271
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N L N NL+ LD+ I+ ++G+
Sbjct: 272 NGISEIENLENNINLQVLDVTANKISNLKGLSHLVK 307
>gi|219821270|gb|ACL37758.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 145 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 202
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL +LD+ + I+
Sbjct: 203 NQ-LKDIGTLASLTNLTSLDVANNQIS 228
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 80 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 136
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 137 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 171
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 158
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 159 NKVSDISVLAKLTNLESL 176
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 66/126 (52%), Gaps = 10/126 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 145 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 199
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL---RDCGITTIQG 117
L+ N + LA+LTNL LD++ NQ L+ L L L+L + I+ I+G
Sbjct: 200 LNGNQL--KDIGTLASLTNLTSLDVANNQISNLAPLSGLTKLTELELGYNQISNISPIEG 257
Query: 118 IQQFTS 123
+ TS
Sbjct: 258 LTALTS 263
>gi|386042596|ref|YP_005961401.1| internalin C2 [Listeria monocytogenes 10403S]
gi|404409493|ref|YP_006695081.1| internalin C2 [Listeria monocytogenes SLCC5850]
gi|2347104|gb|AAB67969.1| internalin [Listeria monocytogenes]
gi|345535830|gb|AEO05270.1| internalin C2 [Listeria monocytogenes 10403S]
gi|404229319|emb|CBY50723.1| internalin C2 (LPXTG motif) [Listeria monocytogenes SLCC5850]
Length = 548
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
A+L + L G G+TTI+G+ L NL L+L N L L NLT + L+LSGN
Sbjct: 73 ADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITD--LTPLKNLTKITELELSGN 130
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTI 115
+A L ++KTLDL IT +
Sbjct: 131 PLKNVSAIAGLQSIKTLDLTSTQITDV 157
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 116 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 168
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + GN ++ L LANL L TL D I+ I
Sbjct: 169 LYLDLNQITN--ISPLAGLTNLQYLSI-GNAQVSDLTPLANLSKLTTLKADDNKISDI 223
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 138 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYL 191
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA+LPNL + L++ I+ +
Sbjct: 192 SIGNAQV--SDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDV 245
>gi|83629777|gb|ABC26550.1| internalin C2 [Listeria monocytogenes]
gi|83629797|gb|ABC26560.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
A+L + L G G+TTI+G+ L NL L+L N L L NLT + L+LSGN
Sbjct: 72 ADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITD--LTPLKNLTKITELELSGN 129
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTI 115
+A L ++KTLDL IT +
Sbjct: 130 PLKNVSAIAGLQSIKTLDLTSTQITDV 156
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 115 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 167
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + GN ++ L LANL L TL D I+ I
Sbjct: 168 LYLDLNQITN--ISPLAGLTNLQYLSI-GNAQVSDLTPLANLSKLTTLKADDNKISDI 222
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 137 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYL 190
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA+LPNL + L++ I+ +
Sbjct: 191 SIGNAQV--SDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDV 244
>gi|83629805|gb|ABC26564.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
A+L + L G G+TTI+G+ L NL L+L N L L NLT + L+LSGN
Sbjct: 72 ADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITD--LTPLKNLTKITELELSGN 129
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTI 115
+A L ++KTLDL IT +
Sbjct: 130 PLKNVSAIAGLQSIKTLDLTSTQITDV 156
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 115 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 167
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + GN ++ L LANL L TL D I+ I
Sbjct: 168 LYLDLNQITN--ISPLAGLTNLQYLSI-GNAQVSDLTPLANLSKLTTLKADDNKISDI 222
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 137 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYL 190
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA+LPNL + L++ I+ +
Sbjct: 191 SIGNAQV--SDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDV 244
>gi|119331230|ref|NP_001073267.1| leucine-rich repeat-containing protein 46 [Bos taurus]
gi|86438495|gb|AAI12535.1| Leucine rich repeat containing 46 [Bos taurus]
gi|296476509|tpg|DAA18624.1| TPA: leucine rich repeat containing 46 [Bos taurus]
Length = 324
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
L L+ + LD GITTI+ L L+NL +L L N +E LA + +L+ L L+GNQ
Sbjct: 44 LAELQTVRLDREGITTIRNLEGLQNLHSLYLQGNKIQR--IENLACVPSLRFLSLAGNQI 101
Query: 91 LTTLGLANLPNLKTLDLRDCGITTIQ 116
L +LP+L+ LDL + I T++
Sbjct: 102 RQVENLRDLPHLQFLDLSENLIETLK 127
>gi|887874|gb|AAA69536.1| internalin, partial [Listeria monocytogenes]
Length = 344
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L L G
Sbjct: 64 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSL-G 120
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 121 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 155
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTN L L+G
Sbjct: 129 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNWDELSLNG 186
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L +G LA+L NL LDL + I+ + ++ T
Sbjct: 187 NQ-LKDIGTLASLTNLTDLDLANNQISNLAPLRGLT 221
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L L + L+ LANLT L+ LD+S
Sbjct: 86 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSLGNQVT---DLKPLANLTTLERLDISS 142
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
N+ LA L NL++L + I+ I + T++
Sbjct: 143 NKVSDISVLAKLTNLESLIATNNQISDITPLGILTNW 179
>gi|313485061|gb|ADR53004.1| InlA [Listeria monocytogenes]
Length = 724
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|219821324|gb|ACL37794.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 145 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 202
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL +LD+ + I+
Sbjct: 203 NQ-LKDIGTLASLTNLTSLDVANNQIS 228
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 80 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 136
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 137 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 171
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 158
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 159 NKVSDISVLAKLTNLESL 176
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 145 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 199
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL---RDCGITTIQG 117
L+ N + LA+LTNL LD++ NQ L+ L L L+L + I+ I G
Sbjct: 200 LNGNQL--KDIGTLASLTNLTSLDVANNQISNLAPLSGLTKLTELELGYNQISNISPIAG 257
Query: 118 IQQFTS 123
+ TS
Sbjct: 258 LTALTS 263
>gi|219821285|gb|ACL37768.1| internalin A [Listeria monocytogenes]
gi|219821315|gb|ACL37788.1| internalin A [Listeria monocytogenes]
gi|219821321|gb|ACL37792.1| internalin A [Listeria monocytogenes]
gi|219821327|gb|ACL37796.1| internalin A [Listeria monocytogenes]
gi|219821345|gb|ACL37808.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 145 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 202
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL +LD+ + I+
Sbjct: 203 NQ-LKDIGTLASLTNLTSLDVANNQIS 228
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 80 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 136
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 137 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 171
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 158
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 159 NKVSDISVLAKLTNLESL 176
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 66/126 (52%), Gaps = 10/126 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 145 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 199
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL---RDCGITTIQG 117
L+ N + LA+LTNL LD++ NQ L+ L L L+L + I+ I+G
Sbjct: 200 LNGNQL--KDIGTLASLTNLTSLDVANNQISNLAPLSGLTKLTELELGYNQISNISPIEG 257
Query: 118 IQQFTS 123
+ TS
Sbjct: 258 LTALTS 263
>gi|145480745|ref|XP_001426395.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393470|emb|CAK58997.1| unnamed protein product [Paramecium tetraurelia]
Length = 549
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L L L+KL LD I I+ L L NL LDLS N L +EGL L NL+ L +
Sbjct: 71 LQGLERLEKLQLDNNIIQKIENLDHLVNLHWLDLSFN--LIKEIEGLDKLVNLKDLSMFN 128
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
NQ + GL N +L L + + I + + + Q+ S
Sbjct: 129 NQLTSVGGLDNCKSLNVLSIGNNKIPSFEIVTQYFS 164
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
Query: 9 VLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH 68
V D +A IT G L +L+ + L I I+ L L+ LE L L +N +
Sbjct: 35 VKDYNAENKITMGDQIML-----NSLRVMSLSFKNIWKIENLQGLERLEKLQLDNN--II 87
Query: 69 GSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
+E L +L NL LDLS N GL L NLK L + + +T++ G+ S
Sbjct: 88 QKIENLDHLVNLHWLDLSFNLIKEIEGLDKLVNLKDLSMFNNQLTSVGGLDNCKS 142
>gi|386052543|ref|YP_005970101.1| internalin C2 [Listeria monocytogenes Finland 1998]
gi|346645194|gb|AEO37819.1| internalin C2 [Listeria monocytogenes Finland 1998]
Length = 548
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
A+L + L G G+TTI+G+ L NL L+L N L L NLT + L+LSGN
Sbjct: 73 ADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITD--LTPLKNLTKITELELSGN 130
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTI 115
+A L ++KTLDL IT +
Sbjct: 131 PLKNVSAIAGLQSIKTLDLTSTQITDV 157
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 116 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 168
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + GN ++ L LANL L TL D I+ I
Sbjct: 169 LYLDLNQITN--ISPLAGLTNLQYLSI-GNAQVSDLTPLANLSKLTTLKADDNKISDI 223
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 138 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYL 191
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA+LPNL + L++ I+ +
Sbjct: 192 SIGNAQV--SDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDV 245
>gi|167861940|gb|ACA05669.1| InlA [Listeria monocytogenes]
gi|167861954|gb|ACA05676.1| InlA [Listeria monocytogenes]
gi|194239400|emb|CAQ76840.1| internalin A [Listeria monocytogenes]
gi|298360640|gb|ADI77899.1| truncated internalin A [Listeria monocytogenes]
gi|298360688|gb|ADI77923.1| truncated internalin A [Listeria monocytogenes]
gi|443428860|gb|AGC92229.1| truncated internalin A [Listeria monocytogenes]
gi|443428878|gb|AGC92238.1| truncated internalin A [Listeria monocytogenes]
Length = 684
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|83629801|gb|ABC26562.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
A+L + L G G+TTI+G+ L NL L+L N L L NLT + L+LSGN
Sbjct: 72 ADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITD--LTPLKNLTKITELELSGN 129
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTI 115
+A L ++KTLDL IT +
Sbjct: 130 PLKNVSAIAGLQSIKTLDLTSTQITDV 156
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 115 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTSLAGLSNLQV 167
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + GN ++ L LANL L TL D I+ I
Sbjct: 168 LYLDLNQITN--ISPLAGLTNLQYLSI-GNAQVSDLTPLANLSKLTTLKADDNKISDI 222
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 137 IAGLQSIKTLDL------TSTQITDVTSLAGLSNLQVLYLDLNQITNISPLAGLTNLQYL 190
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA+LPNL + L++ I+ +
Sbjct: 191 SIGNAQV--SDLTPLANLSKLTTLKADDNKISDISRLASLPNLIEVHLKNNQISDV 244
>gi|371942142|gb|AEX60883.1| internaline [Listeria monocytogenes]
Length = 790
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|284800560|ref|YP_003412425.1| internalin H [Listeria monocytogenes 08-5578]
gi|284993746|ref|YP_003415514.1| internalin H [Listeria monocytogenes 08-5923]
gi|284056122|gb|ADB67063.1| internalin H [Listeria monocytogenes 08-5578]
gi|284059213|gb|ADB70152.1| internalin H [Listeria monocytogenes 08-5923]
Length = 548
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
A+L + L G G+TTI+G+ L NL L+L N L L NLT + L+LSGN
Sbjct: 73 ADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITD--LTPLKNLTKITELELSGN 130
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTI 115
+A L ++KTLDL IT +
Sbjct: 131 PLKNVSAIAGLQSIKTLDLTSTQITDV 157
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 116 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 168
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + GN ++ L LANL L TL D I+ I
Sbjct: 169 LYLDLNQITN--ISPLAGLTNLQYLSI-GNAQVSDLTPLANLSKLTTLKADDNKISDI 223
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 138 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYL 191
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA+LPNL + L++ I+ +
Sbjct: 192 SIGNAQV--SDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDV 245
>gi|255025517|ref|ZP_05297503.1| internalin A [Listeria monocytogenes FSL J2-003]
Length = 744
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT + L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|258565847|ref|XP_002583668.1| protein phosphatases PP1 regulatory subunit sds22 [Uncinocarpus
reesii 1704]
gi|237907369|gb|EEP81770.1| protein phosphatases PP1 regulatory subunit sds22 [Uncinocarpus
reesii 1704]
Length = 622
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
+++L+NLK L L +T++ GL+ L NLE L +S N H + GL +L NL VLD+S
Sbjct: 177 ISHLSNLKILSLPSNRLTSLSGLSGLTNLEELYVSHNAITH--ISGLESLANLHVLDISN 234
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
NQ +++L +++ + + +++ + +++
Sbjct: 235 NQISKLENISHLTHIEEVWASNNKLSSFEEVER 267
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L L+ L+L G I+ ++ L NL+ L L SN SL GL+ LTNL+ L +S
Sbjct: 157 GLEGLAKLRNLEL---GANRIRNISHLSNLKILSLPSNRLT--SLSGLSGLTNLEELYVS 211
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N GL +L NL LD+ + I+ ++ I T
Sbjct: 212 HNAITHISGLESLANLHVLDISNNQISKLENISHLT 247
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 7/89 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
+++L L++L L +N +TS S GL+ LTNL++L + IT I GL L NL LD
Sbjct: 177 ISHLSNLKILSLPSN-RLTSLS----GLSGLTNLEELYVSHNAITHISGLESLANLHVLD 231
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
+S+N LE +++LT+++ + S N+
Sbjct: 232 ISNNQI--SKLENISHLTHIEEVWASNNK 258
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 10/93 (10%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLT+L + I ++GLAKL+NLE L +N + +++L+NL++L L
Sbjct: 139 LVNLTDLYFVQNRIQRIEGLEGLAKLRNLE---LGAN-----RIRNISHLSNLKILSLPS 190
Query: 88 NQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQ 119
N+ LT+L GL+ L NL+ L + IT I G++
Sbjct: 191 NR-LTSLSGLSGLTNLEELYVSHNAITHISGLE 222
>gi|217965469|ref|YP_002351147.1| internalin-A [Listeria monocytogenes HCC23]
gi|386007166|ref|YP_005925444.1| internalin A [Listeria monocytogenes L99]
gi|386025755|ref|YP_005946531.1| internalin A [Listeria monocytogenes M7]
gi|167861970|gb|ACA05684.1| InlA [Listeria monocytogenes]
gi|167861982|gb|ACA05690.1| InlA [Listeria monocytogenes]
gi|217334739|gb|ACK40533.1| internalin-A [Listeria monocytogenes HCC23]
gi|307569976|emb|CAR83155.1| internalin A [Listeria monocytogenes L99]
gi|336022336|gb|AEH91473.1| internalin A [Listeria monocytogenes M7]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|443428800|gb|AGC92199.1| truncated internalin A [Listeria monocytogenes]
gi|443428802|gb|AGC92200.1| truncated internalin A [Listeria monocytogenes]
gi|443428806|gb|AGC92202.1| truncated internalin A [Listeria monocytogenes]
gi|443428824|gb|AGC92211.1| truncated internalin A [Listeria monocytogenes]
gi|443428830|gb|AGC92214.1| truncated internalin A [Listeria monocytogenes]
gi|443428832|gb|AGC92215.1| truncated internalin A [Listeria monocytogenes]
gi|443428834|gb|AGC92216.1| truncated internalin A [Listeria monocytogenes]
Length = 797
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|83629665|gb|ABC26494.1| internalin H [Listeria monocytogenes]
gi|83629667|gb|ABC26495.1| internalin H [Listeria monocytogenes]
gi|83629669|gb|ABC26496.1| internalin H [Listeria monocytogenes]
Length = 547
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
A+L + L G G+TTI+G+ L NL L+L N L L NLT + L+LSGN
Sbjct: 72 ADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITD--LTPLKNLTKITELELSGN 129
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTI 115
+A L ++KTLDL IT +
Sbjct: 130 PLKNVSAIAGLQSIKTLDLTSTQITDV 156
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 115 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 167
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + GN ++ L LANL L TL D I+ I
Sbjct: 168 LYLDLNQITN--ISPLAGLTNLQYLSI-GNAQVSDLTPLANLSKLTTLKADDNKISDI 222
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 137 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYL 190
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA+LPNL + L++ I+ +
Sbjct: 191 SIGNAQV--SDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDV 244
>gi|16802309|ref|NP_463794.1| internalin H [Listeria monocytogenes EGD-e]
gi|386049192|ref|YP_005967183.1| internalin H protein [Listeria monocytogenes FSL R2-561]
gi|404282694|ref|YP_006683591.1| internalin H [Listeria monocytogenes SLCC2372]
gi|405757250|ref|YP_006686526.1| internalin H [Listeria monocytogenes SLCC2479]
gi|3980135|emb|CAA07457.1| internalin H [Listeria monocytogenes]
gi|16409628|emb|CAD00790.1| internalin H [Listeria monocytogenes EGD-e]
gi|171850911|emb|CAP19944.1| internalin H protein [Listeria monocytogenes]
gi|171850913|emb|CAP19945.1| internalin H protein [Listeria monocytogenes]
gi|171850915|emb|CAP19946.1| internalin H protein [Listeria monocytogenes]
gi|171850917|emb|CAP19947.1| internalin H protein [Listeria monocytogenes]
gi|171850921|emb|CAP19948.1| internalin H protein [Listeria monocytogenes]
gi|171850923|emb|CAP19949.1| internalin H protein [Listeria monocytogenes]
gi|171850926|emb|CAP19950.1| internalin H protein [Listeria monocytogenes]
gi|171850928|emb|CAP19951.1| internalin H protein [Listeria monocytogenes]
gi|346423038|gb|AEO24563.1| internalin H protein [Listeria monocytogenes FSL R2-561]
gi|404232196|emb|CBY53599.1| internalin H (LPXTG motif) [Listeria monocytogenes SLCC2372]
gi|404235132|emb|CBY56534.1| internalin H (LPXTG motif) [Listeria monocytogenes SLCC2479]
Length = 548
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
A+L + L G G+TTI+G+ L NL L+L N L L NLT + L+LSGN
Sbjct: 73 ADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITD--LTPLKNLTKITELELSGN 130
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTI 115
+A L ++KTLDL IT +
Sbjct: 131 PLKNVSAIAGLQSIKTLDLTSTQITDV 157
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 116 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 168
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + GN ++ L LANL L TL D I+ I
Sbjct: 169 LYLDLNQITN--ISPLAGLTNLQYLSI-GNAQVSDLTPLANLSKLTTLKADDNKISDI 223
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 138 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYL 191
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA+LPNL + L++ I+ +
Sbjct: 192 SIGNAQV--SDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDV 245
>gi|371942100|gb|AEX60862.1| internaline [Listeria monocytogenes]
Length = 789
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|298359722|gb|ADI77440.1| truncated internalin A [Listeria monocytogenes]
gi|298359752|gb|ADI77455.1| truncated internalin A [Listeria monocytogenes]
gi|298359762|gb|ADI77460.1| truncated internalin A [Listeria monocytogenes]
gi|298359812|gb|ADI77485.1| truncated internalin A [Listeria monocytogenes]
gi|298359814|gb|ADI77486.1| truncated internalin A [Listeria monocytogenes]
gi|298359858|gb|ADI77508.1| truncated internalin A [Listeria monocytogenes]
gi|298359886|gb|ADI77522.1| truncated internalin A [Listeria monocytogenes]
gi|298359900|gb|ADI77529.1| truncated internalin A [Listeria monocytogenes]
gi|298359906|gb|ADI77532.1| truncated internalin A [Listeria monocytogenes]
gi|298359912|gb|ADI77535.1| truncated internalin A [Listeria monocytogenes]
gi|298359944|gb|ADI77551.1| truncated internalin A [Listeria monocytogenes]
gi|298359980|gb|ADI77569.1| truncated internalin A [Listeria monocytogenes]
gi|298359990|gb|ADI77574.1| truncated internalin A [Listeria monocytogenes]
gi|298359992|gb|ADI77575.1| truncated internalin A [Listeria monocytogenes]
gi|298359994|gb|ADI77576.1| truncated internalin A [Listeria monocytogenes]
gi|298360008|gb|ADI77583.1| truncated internalin A [Listeria monocytogenes]
gi|298360026|gb|ADI77592.1| truncated internalin A [Listeria monocytogenes]
gi|298360060|gb|ADI77609.1| truncated internalin A [Listeria monocytogenes]
gi|298360078|gb|ADI77618.1| truncated internalin A [Listeria monocytogenes]
gi|298360082|gb|ADI77620.1| truncated internalin A [Listeria monocytogenes]
gi|298360096|gb|ADI77627.1| truncated internalin A [Listeria monocytogenes]
gi|298360142|gb|ADI77650.1| truncated internalin A [Listeria monocytogenes]
gi|298360144|gb|ADI77651.1| truncated internalin A [Listeria monocytogenes]
gi|298360146|gb|ADI77652.1| truncated internalin A [Listeria monocytogenes]
gi|298360160|gb|ADI77659.1| truncated internalin A [Listeria monocytogenes]
gi|298360192|gb|ADI77675.1| truncated internalin A [Listeria monocytogenes]
gi|298360252|gb|ADI77705.1| truncated internalin A [Listeria monocytogenes]
gi|298360274|gb|ADI77716.1| truncated internalin A [Listeria monocytogenes]
gi|298360276|gb|ADI77717.1| truncated internalin A [Listeria monocytogenes]
gi|298360296|gb|ADI77727.1| truncated internalin A [Listeria monocytogenes]
gi|298360304|gb|ADI77731.1| truncated internalin A [Listeria monocytogenes]
gi|298360316|gb|ADI77737.1| truncated internalin A [Listeria monocytogenes]
gi|298360320|gb|ADI77739.1| truncated internalin A [Listeria monocytogenes]
gi|298360336|gb|ADI77747.1| truncated internalin A [Listeria monocytogenes]
gi|298360342|gb|ADI77750.1| truncated internalin A [Listeria monocytogenes]
gi|298360348|gb|ADI77753.1| truncated internalin A [Listeria monocytogenes]
gi|298360374|gb|ADI77766.1| truncated internalin A [Listeria monocytogenes]
gi|298360380|gb|ADI77769.1| truncated internalin A [Listeria monocytogenes]
gi|298360404|gb|ADI77781.1| truncated internalin A [Listeria monocytogenes]
gi|298360414|gb|ADI77786.1| truncated internalin A [Listeria monocytogenes]
gi|298360426|gb|ADI77792.1| truncated internalin A [Listeria monocytogenes]
gi|298360458|gb|ADI77808.1| truncated internalin A [Listeria monocytogenes]
gi|298360464|gb|ADI77811.1| truncated internalin A [Listeria monocytogenes]
gi|298360488|gb|ADI77823.1| truncated internalin A [Listeria monocytogenes]
gi|298360492|gb|ADI77825.1| truncated internalin A [Listeria monocytogenes]
gi|298360518|gb|ADI77838.1| truncated internalin A [Listeria monocytogenes]
gi|298360538|gb|ADI77848.1| truncated internalin A [Listeria monocytogenes]
gi|298360562|gb|ADI77860.1| truncated internalin A [Listeria monocytogenes]
gi|298360594|gb|ADI77876.1| truncated internalin A [Listeria monocytogenes]
gi|298360616|gb|ADI77887.1| truncated internalin A [Listeria monocytogenes]
gi|298360654|gb|ADI77906.1| truncated internalin A [Listeria monocytogenes]
gi|298360660|gb|ADI77909.1| truncated internalin A [Listeria monocytogenes]
gi|298360668|gb|ADI77913.1| truncated internalin A [Listeria monocytogenes]
gi|298360690|gb|ADI77924.1| truncated internalin A [Listeria monocytogenes]
gi|298360696|gb|ADI77927.1| truncated internalin A [Listeria monocytogenes]
gi|298360720|gb|ADI77939.1| truncated internalin A [Listeria monocytogenes]
gi|443428784|gb|AGC92191.1| truncated internalin A [Listeria monocytogenes]
gi|443428786|gb|AGC92192.1| truncated internalin A [Listeria monocytogenes]
gi|443428790|gb|AGC92194.1| truncated internalin A [Listeria monocytogenes]
gi|443428794|gb|AGC92196.1| truncated internalin A [Listeria monocytogenes]
gi|443428808|gb|AGC92203.1| truncated internalin A [Listeria monocytogenes]
gi|443428810|gb|AGC92204.1| truncated internalin A [Listeria monocytogenes]
gi|443428828|gb|AGC92213.1| truncated internalin A [Listeria monocytogenes]
gi|443428866|gb|AGC92232.1| truncated internalin A [Listeria monocytogenes]
gi|443428874|gb|AGC92236.1| truncated internalin A [Listeria monocytogenes]
gi|443428876|gb|AGC92237.1| truncated internalin A [Listeria monocytogenes]
Length = 699
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|426237837|ref|XP_004012864.1| PREDICTED: leucine-rich repeat-containing protein 46 [Ovis aries]
Length = 324
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
L L+ + LD GITTI+ L L+NL +L L N +E LA + +L+ L L+GNQ
Sbjct: 44 LAELQTVRLDREGITTIRNLEGLQNLHSLYLQGNKIQR--IENLACVPSLRFLSLAGNQI 101
Query: 91 LTTLGLANLPNLKTLDLRDCGITTIQ 116
L +LP+L+ LDL + I T++
Sbjct: 102 RQVENLRDLPHLQFLDLSENLIETLK 127
>gi|397667615|ref|YP_006509152.1| substrate of the Dot/Icm secretion system [Legionella pneumophila
subsp. pneumophila]
gi|395131026|emb|CCD09275.1| substrate of the Dot/Icm secretion system [Legionella pneumophila
subsp. pneumophila]
Length = 553
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 15/111 (13%)
Query: 11 DLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT------IQGLAKLKNLEALDLSSN 64
+LSA+Y + S L+R N LKKL L CG+T + ++LK+L L+L N
Sbjct: 133 ELSASYVLFS--LSR----NAAALKKLSLRNCGVTDANLEYLTRPESRLKSLTHLNLRRN 186
Query: 65 YYLHGSLEGLANLTNLQVLDLSGNQNLTTLG---LANLPNLKTLDLRDCGI 112
H ++ +A+L +L +DLS N + G LA L L+TL L +CGI
Sbjct: 187 NITHQGVDSIAHLQSLTTIDLSQNTGIGDEGVSRLALLKQLRTLYLDNCGI 237
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT--IQGLAKLKNLEA 58
+A+L+ L +DLS N I ++RL L L L+ L LD CGI I+ +AK+ NL+
Sbjct: 196 IAHLQSLTTIDLSQNTGIGDEGVSRLAL--LKQLRTLYLDNCGIGAEGIKAIAKM-NLQT 252
Query: 59 LDLSSN 64
+DLS N
Sbjct: 253 VDLSFN 258
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 16/117 (13%)
Query: 7 LQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGIT---TIQGLAKLKNLEALDL 61
L LDLS + T+ L+ L L N+ +K L LD CG+ T++ L+KL +++ L L
Sbjct: 51 LSELDLS-DTRFTNQELSDLVTALNNIPGIKSLRLDSCGLKDSDTVE-LSKLTHIKKLSL 108
Query: 62 SSNY-----YLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
SNY + LE L N + LS + L +L N LK L LR+CG+T
Sbjct: 109 KSNYLKNRPMFNSMLEALYLDYNTE---LSASYVLFSLS-RNAAALKKLSLRNCGVT 161
>gi|371942074|gb|AEX60849.1| internaline [Listeria monocytogenes]
gi|371942102|gb|AEX60863.1| internaline [Listeria monocytogenes]
gi|371942114|gb|AEX60869.1| internaline [Listeria monocytogenes]
gi|371942124|gb|AEX60874.1| internaline [Listeria monocytogenes]
Length = 790
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|313485058|gb|ADR53003.1| InlA [Listeria monocytogenes]
Length = 765
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|301126468|ref|XP_002909849.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262101999|gb|EEY60051.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 427
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 67/137 (48%), Gaps = 20/137 (14%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG---LANLTNLKKLDLDGC------GITTIQGLA 51
LA L+ LQ L+L + G+LT G LA +T+L L+L C GI+++ L
Sbjct: 185 LARLKNLQTLNL---WYCNQGALTDGGISALAEVTSLTSLNLSNCSQLTDEGISSLSTLV 241
Query: 52 KLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG---LANLPNLKTLDLR 108
KL++LE ++ LA L NL LD++G N+T G L N P L + +L
Sbjct: 242 KLRHLEIANVGE--VTDQGFLALAPLVNLVTLDVAGCYNITDAGTEVLVNFPKLASCNLW 299
Query: 109 DC---GITTIQGIQQFT 122
C G T Q ++ T
Sbjct: 300 YCSEIGDATFQHMESLT 316
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 56/102 (54%), Gaps = 15/102 (14%)
Query: 29 ANLTNLKKLDLDGC---GITTIQGLAKLKNLEALDLSSNYYLH------GSLEGLANLTN 79
+NL+ L L+L GC G I+ LA+LKNL+ L+L +Y + G + LA +T+
Sbjct: 161 SNLSKLNYLNLRGCSQVGDNGIRALARLKNLQTLNL---WYCNQGALTDGGISALAEVTS 217
Query: 80 LQVLDLSGNQNLTTLGLANLP---NLKTLDLRDCGITTIQGI 118
L L+LS LT G+++L L+ L++ + G T QG
Sbjct: 218 LTSLNLSNCSQLTDEGISSLSTLVKLRHLEIANVGEVTDQGF 259
>gi|223006806|gb|ACM69360.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|85679289|gb|ABC72060.1| InlD [Listeria monocytogenes]
Length = 567
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G L N+ L L+ ITT+ LA L L L+LS+N + L+N+TNL L L
Sbjct: 91 GAQYLNNIDTLVLNNNKITTLNPLAGLSRLSILELSNNQL--NDISALSNVTNLHQLRLD 148
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
GNQ G++NL NL+T++L + IT I I
Sbjct: 149 GNQIKQLNGVSNLNNLETIELSNNQITDISPI 180
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 10/85 (11%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
LA L L +L+LS N +I++ L+N+TNL +L LDG I + G++ L NLE
Sbjct: 114 LAGLSRLSILELSNNQLNDISA-------LSNVTNLHQLRLDGNQIKQLNGVSNLNNLET 166
Query: 59 LDLSSNYYLH-GSLEGLANLTNLQV 82
++LS+N + GL NL L +
Sbjct: 167 IELSNNQITDISPISGLKNLIGLGI 191
>gi|83629793|gb|ABC26558.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
A+L + L G G+TTI+G+ L NL L+L N L L NLT + L+LSGN
Sbjct: 72 ADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITD--LTPLKNLTKITELELSGN 129
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTI 115
+A L ++KTLDL IT +
Sbjct: 130 PLKNVSAIAGLQSIKTLDLTSTQITDV 156
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 115 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 167
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + GN ++ L LANL L TL D I+ I
Sbjct: 168 LYLDLNQITN--ISPLAGLTNLQYLSI-GNAQVSDLTPLANLSKLTTLKADDNKISDI 222
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 137 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYL 190
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA+LPNL + L++ I+ +
Sbjct: 191 SIGNAQV--SDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDV 244
>gi|83629761|gb|ABC26542.1| internalin C2 [Listeria monocytogenes]
gi|83629767|gb|ABC26545.1| internalin C2 [Listeria monocytogenes]
gi|83629771|gb|ABC26547.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
A+L + L G G+TTI+G+ L NL L+L N L L NLT + L+LSGN
Sbjct: 72 ADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITD--LTPLKNLTKITELELSGN 129
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTI 115
+A L ++KTLDL IT +
Sbjct: 130 PLKNVSAIAGLQSIKTLDLTSTQITDV 156
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 115 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 167
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + GN ++ L LANL L TL D I+ I
Sbjct: 168 LYLDLNQITN--ISPLAGLTNLQYLSI-GNAQVSDLTPLANLSKLTTLKADDNKISDI 222
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 137 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYL 190
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA+LPNL + L++ I+ +
Sbjct: 191 SIGNAQV--SDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDV 244
>gi|83629751|gb|ABC26537.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
A+L + L G G+TTI+G+ L NL L+L N L L NLT + L+LSGN
Sbjct: 72 ADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITD--LTPLKNLTKITELELSGN 129
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTI 115
+A L ++KTLDL IT +
Sbjct: 130 PLKNVSAIAGLQSIKTLDLTSTQITDV 156
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 115 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 167
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + GN ++ L LANL L TL D I+ I
Sbjct: 168 LYLDLNQITN--ISPLAGLTNLQYLSI-GNAQVSDLTPLANLSKLTTLKADDNKISDI 222
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 137 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYL 190
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA+LPNL + L++ I+ +
Sbjct: 191 SIGNAQV--SDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDV 244
>gi|298360230|gb|ADI77694.1| internalin A [Listeria monocytogenes]
gi|298360588|gb|ADI77873.1| internalin A [Listeria monocytogenes]
gi|298360606|gb|ADI77882.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT + L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|298359950|gb|ADI77554.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT + L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|148607496|gb|ABQ95524.1| InlA [Listeria monocytogenes]
Length = 730
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|126143308|gb|ABN80096.1| InlA [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|71912406|gb|AAZ53235.1| InlA [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 66/126 (52%), Gaps = 10/126 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLKTLDLRDCGITTIQG 117
L+ N + LA+LTNL LDL+ NQ NL L GL L LK + I+ + G
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAG 315
Query: 118 IQQFTS 123
+ TS
Sbjct: 316 LTALTS 321
>gi|46906689|ref|YP_013078.1| internalin A [Listeria monocytogenes serotype 4b str. F2365]
gi|254932755|ref|ZP_05266114.1| internalin A [Listeria monocytogenes HPB2262]
gi|405748809|ref|YP_006672275.1| internalin A [Listeria monocytogenes ATCC 19117]
gi|405751670|ref|YP_006675135.1| internalin A [Listeria monocytogenes SLCC2378]
gi|417316727|ref|ZP_12103366.1| internalin A [Listeria monocytogenes J1-220]
gi|424713328|ref|YP_007014043.1| Internalin-A [Listeria monocytogenes serotype 4b str. LL195]
gi|424822183|ref|ZP_18247196.1| Internalin-A [Listeria monocytogenes str. Scott A]
gi|50400895|sp|Q723K6.1|INLA_LISMF RecName: Full=Internalin-A; Flags: Precursor
gi|46879954|gb|AAT03255.1| internalin A [Listeria monocytogenes serotype 4b str. F2365]
gi|130774757|gb|ABO32393.1| InlA [Listeria monocytogenes]
gi|130774763|gb|ABO32396.1| InlA [Listeria monocytogenes]
gi|130774781|gb|ABO32405.1| InlA [Listeria monocytogenes]
gi|130774785|gb|ABO32407.1| InlA [Listeria monocytogenes]
gi|130774789|gb|ABO32409.1| InlA [Listeria monocytogenes]
gi|167861870|gb|ACA05634.1| InlA [Listeria monocytogenes]
gi|167861880|gb|ACA05639.1| InlA [Listeria monocytogenes]
gi|167861882|gb|ACA05640.1| InlA [Listeria monocytogenes]
gi|167861884|gb|ACA05641.1| InlA [Listeria monocytogenes]
gi|167861886|gb|ACA05642.1| InlA [Listeria monocytogenes]
gi|167861896|gb|ACA05647.1| InlA [Listeria monocytogenes]
gi|167861898|gb|ACA05648.1| InlA [Listeria monocytogenes]
gi|167861910|gb|ACA05654.1| InlA [Listeria monocytogenes]
gi|167861912|gb|ACA05655.1| InlA [Listeria monocytogenes]
gi|167861952|gb|ACA05675.1| InlA [Listeria monocytogenes]
gi|167861958|gb|ACA05678.1| InlA [Listeria monocytogenes]
gi|167861960|gb|ACA05679.1| InlA [Listeria monocytogenes]
gi|167861966|gb|ACA05682.1| InlA [Listeria monocytogenes]
gi|167861988|gb|ACA05693.1| InlA [Listeria monocytogenes]
gi|167861996|gb|ACA05697.1| InlA [Listeria monocytogenes]
gi|167862008|gb|ACA05703.1| InlA [Listeria monocytogenes]
gi|167862010|gb|ACA05704.1| InlA [Listeria monocytogenes]
gi|167862014|gb|ACA05706.1| InlA [Listeria monocytogenes]
gi|167862016|gb|ACA05707.1| InlA [Listeria monocytogenes]
gi|194239380|emb|CAQ76830.1| internalin A [Listeria monocytogenes]
gi|194239394|emb|CAQ76837.1| internalin A [Listeria monocytogenes]
gi|194326167|emb|CAQ77242.1| internalin A [Listeria monocytogenes]
gi|223006786|gb|ACM69350.1| internalin A [Listeria monocytogenes]
gi|223006788|gb|ACM69351.1| internalin A [Listeria monocytogenes]
gi|223006798|gb|ACM69356.1| internalin A [Listeria monocytogenes]
gi|223006804|gb|ACM69359.1| internalin A [Listeria monocytogenes]
gi|223006810|gb|ACM69362.1| internalin A [Listeria monocytogenes]
gi|293584308|gb|EFF96340.1| internalin A [Listeria monocytogenes HPB2262]
gi|294358391|gb|ADE73848.1| InlA [Listeria monocytogenes]
gi|294358403|gb|ADE73854.1| InlA [Listeria monocytogenes]
gi|298359884|gb|ADI77521.1| internalin A [Listeria monocytogenes]
gi|298359898|gb|ADI77528.1| internalin A [Listeria monocytogenes]
gi|298359902|gb|ADI77530.1| internalin A [Listeria monocytogenes]
gi|298359908|gb|ADI77533.1| internalin A [Listeria monocytogenes]
gi|298359940|gb|ADI77549.1| internalin A [Listeria monocytogenes]
gi|298359948|gb|ADI77553.1| internalin A [Listeria monocytogenes]
gi|298360056|gb|ADI77607.1| internalin A [Listeria monocytogenes]
gi|298360094|gb|ADI77626.1| internalin A [Listeria monocytogenes]
gi|298360148|gb|ADI77653.1| internalin A [Listeria monocytogenes]
gi|298360270|gb|ADI77714.1| internalin A [Listeria monocytogenes]
gi|298360288|gb|ADI77723.1| internalin A [Listeria monocytogenes]
gi|298360324|gb|ADI77741.1| internalin A [Listeria monocytogenes]
gi|298360326|gb|ADI77742.1| internalin A [Listeria monocytogenes]
gi|298360350|gb|ADI77754.1| internalin A [Listeria monocytogenes]
gi|298360362|gb|ADI77760.1| internalin A [Listeria monocytogenes]
gi|298360456|gb|ADI77807.1| internalin A [Listeria monocytogenes]
gi|298360480|gb|ADI77819.1| internalin A [Listeria monocytogenes]
gi|298360508|gb|ADI77833.1| internalin A [Listeria monocytogenes]
gi|298360520|gb|ADI77839.1| internalin A [Listeria monocytogenes]
gi|298360554|gb|ADI77856.1| internalin A [Listeria monocytogenes]
gi|298360632|gb|ADI77895.1| internalin A [Listeria monocytogenes]
gi|298360634|gb|ADI77896.1| internalin A [Listeria monocytogenes]
gi|298360662|gb|ADI77910.1| internalin A [Listeria monocytogenes]
gi|328475915|gb|EGF46639.1| internalin A [Listeria monocytogenes J1-220]
gi|332310863|gb|EGJ23958.1| Internalin-A [Listeria monocytogenes str. Scott A]
gi|340052073|emb|CBY84388.1| internalin A [Listeria monocytogenes]
gi|340052075|emb|CBY84389.1| internalin A [Listeria monocytogenes]
gi|404218009|emb|CBY69373.1| internalin A (LPXTG motif) [Listeria monocytogenes ATCC 19117]
gi|404220870|emb|CBY72233.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2378]
gi|424012512|emb|CCO63052.1| Internalin-A [Listeria monocytogenes serotype 4b str. LL195]
gi|443428812|gb|AGC92205.1| internalin A [Listeria monocytogenes]
gi|443428814|gb|AGC92206.1| internalin A [Listeria monocytogenes]
gi|443428816|gb|AGC92207.1| internalin A [Listeria monocytogenes]
gi|443428818|gb|AGC92208.1| internalin A [Listeria monocytogenes]
gi|443428826|gb|AGC92212.1| internalin A [Listeria monocytogenes]
gi|443428836|gb|AGC92217.1| internalin A [Listeria monocytogenes]
gi|443428840|gb|AGC92219.1| internalin A [Listeria monocytogenes]
gi|443428852|gb|AGC92225.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|423363694|ref|ZP_17341191.1| hypothetical protein IC1_05668, partial [Bacillus cereus VD022]
gi|401074678|gb|EJP83074.1| hypothetical protein IC1_05668, partial [Bacillus cereus VD022]
Length = 826
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+KL L +T I ++KL++L+ +DL+SN S+ + L N+ +L L
Sbjct: 235 GLEYMTNLEKLTLRESNVTDISAISKLRSLKYVDLTSNSI--ESIHPIGQLENINMLFLR 292
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
N+ L+ + +KTLDL I IQ +
Sbjct: 293 DNKISDLTPLSKMKKIKTLDLIGNNIKDIQPL 324
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+ L L+G G+ I ++ LK L +++S N + L++L NLQ L+L+
Sbjct: 583 GLEYMTNLENLTLEGVGLKNIDFISNLKRLNNVNVSHNQI--EDITPLSSLKNLQWLNLT 640
Query: 87 GNQ--NLTTLG 95
N+ ++T LG
Sbjct: 641 ENRITDVTVLG 651
>gi|371942140|gb|AEX60882.1| internaline [Listeria monocytogenes]
Length = 790
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|371942126|gb|AEX60875.1| internaline [Listeria monocytogenes]
Length = 790
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|371942104|gb|AEX60864.1| internaline [Listeria monocytogenes]
Length = 790
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|371942096|gb|AEX60860.1| internaline [Listeria monocytogenes]
Length = 790
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|344298046|ref|XP_003420705.1| PREDICTED: leucine-rich repeat-containing protein 48 [Loxodonta
africana]
Length = 523
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL NLT+L LDL I TI+GL L NLE L L +N ++ L L LQVL L
Sbjct: 82 GLENLTHLVWLDLSFNNIETIEGLDTLVNLEDLSLFNNRI--SKIDSLDALVKLQVLSLG 139
Query: 87 GNQ---NLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
NQ + + L +L+TL L I+ + + F
Sbjct: 140 NNQIFNMMNVIYLRRFKDLRTLSLSGNPISEAEDYKMF 177
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 37 LDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGL 96
L LD I I L + +NL L L +N + +EGL NLT+L LDLS N T GL
Sbjct: 48 LQLDFQNILRIDNLWQFENLRKLQLDNN--IIERIEGLENLTHLVWLDLSFNNIETIEGL 105
Query: 97 ANLPNLKTLDLRDCGITTIQGI 118
L NL+ L L + I+ I +
Sbjct: 106 DTLVNLEDLSLFNNRISKIDSL 127
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NL+KL LD I I+GL L +L LDLS N ++EGL L NL+ L L
Sbjct: 61 LWQFENLRKLQLDNNIIERIEGLENLTHLVWLDLSFNNI--ETIEGLDTLVNLEDLSLFN 118
Query: 88 NQNLTTLGLANLPNLKTLDL 107
N+ L L L+ L L
Sbjct: 119 NRISKIDSLDALVKLQVLSL 138
>gi|324518902|gb|ADY47233.1| Protein phosphatase 1 regulatory subunit 7 [Ascaris suum]
Length = 325
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL+ LT L L+L I I+ L+ K ++ L L +N +E L +L NL+VL L
Sbjct: 141 GLSELTELTYLELGDNRIKKIENLSTNKKIQRLFLGANQI--QEIENLDDLENLEVLSLP 198
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
N T GL L NL+ L L G+ IQG++
Sbjct: 199 ANAIQTIKGLDKLLNLRELYLSQNGVKEIQGLEH 232
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NL L +LDL IT ++ L L NLE LDLS N ++GL++L L++L
Sbjct: 76 LHNLVTLTELDLYDNQITKVENLDALVNLETLDLSFNRI--AVIDGLSSLKKLKMLFFVH 133
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
N+ GL+ L L L+L D I I+ +
Sbjct: 134 NKIEKIEGLSELTELTYLELGDNRIKKIENL 164
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 35 KKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL 94
K++DL I I+G L+++E+L L N L +E L NL L LDL NQ
Sbjct: 39 KEVDLTRRRIDKIEGFDFLRSIESLCLRWN--LIKRIENLHNLVTLTELDLYDNQITKVE 96
Query: 95 GLANLPNLKTLDLRDCGITTIQGI 118
L L NL+TLDL I I G+
Sbjct: 97 NLDALVNLETLDLSFNRIAVIDGL 120
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L +L L+VL L AN T GL L NL++L L G+ IQGL + LE LD
Sbjct: 186 LDDLENLEVLSLPAN-----AIQTIKGLDKLLNLRELYLSQNGVKEIQGLEHNEKLEILD 240
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLG-LANLPNL 102
L NY L + G+ +L NL NQ + + LA+LP L
Sbjct: 241 L--NYNLLKRISGVRHLNNLTDFWAKSNQLYEMEDVNELADLPRL 283
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G L +++ L L I I+ L L L LDL N +E L L NL+ LDLS
Sbjct: 53 GFDFLRSIESLCLRWNLIKRIENLHNLVTLTELDLYDNQI--TKVENLDALVNLETLDLS 110
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ GL++L LK L I I+G+ + T
Sbjct: 111 FNRIAVIDGLSSLKKLKMLFFVHNKIEKIEGLSELTE 147
>gi|298360700|gb|ADI77929.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|298360648|gb|ADI77903.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|294358387|gb|ADE73846.1| InlA [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ L +LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLISLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|238559761|gb|ACR46079.1| lectin-associated matrix protein, partial [Danio rerio]
Length = 134
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLT-NLQVLDLSG 87
++ NL+ L + + +I L KL L L+LS N + G LE LA T NL L+LSG
Sbjct: 30 SDFENLEFLSMINVNLLSISNLPKLNKLRKLELSDNR-ISGGLEVLAERTPNLTHLNLSG 88
Query: 88 NQ--NLTTL-GLANLPNLKTLDLRDCGITTI 115
N+ ++ TL L LPNL +LDL +C +T +
Sbjct: 89 NKIKDINTLEPLKKLPNLHSLDLFNCEVTML 119
>gi|150371888|dbj|BAF65733.1| internalin A [Listeria monocytogenes]
gi|150371890|dbj|BAF65734.1| internalin A [Listeria monocytogenes]
Length = 797
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|386042770|ref|YP_005961575.1| internalin A [Listeria monocytogenes 10403S]
gi|404409675|ref|YP_006695263.1| internalin A [Listeria monocytogenes SLCC5850]
gi|403399436|sp|G2K3G6.1|INLA_LISM4 RecName: Full=Internalin-A; Flags: Precursor
gi|150371722|dbj|BAF65676.1| internalin A [Listeria monocytogenes]
gi|150371786|dbj|BAF65682.1| internalin A [Listeria monocytogenes]
gi|150371800|dbj|BAF65689.1| internalin A [Listeria monocytogenes]
gi|150371810|dbj|BAF65694.1| internalin A [Listeria monocytogenes]
gi|150371812|dbj|BAF65695.1| internalin A [Listeria monocytogenes]
gi|150371816|dbj|BAF65697.1| internalin A [Listeria monocytogenes]
gi|150371826|dbj|BAF65702.1| internalin A [Listeria monocytogenes]
gi|150371840|dbj|BAF65709.1| internalin A [Listeria monocytogenes]
gi|150371842|dbj|BAF65710.1| internalin A [Listeria monocytogenes]
gi|150371862|dbj|BAF65720.1| internalin A [Listeria monocytogenes]
gi|150371866|dbj|BAF65722.1| internalin A [Listeria monocytogenes]
gi|167861902|gb|ACA05650.1| InlA [Listeria monocytogenes]
gi|167861984|gb|ACA05691.1| InlA [Listeria monocytogenes]
gi|167862000|gb|ACA05699.1| InlA [Listeria monocytogenes]
gi|167862006|gb|ACA05702.1| InlA [Listeria monocytogenes]
gi|194239412|emb|CAQ76846.1| internalin A [Listeria monocytogenes]
gi|223006784|gb|ACM69349.1| internalin A [Listeria monocytogenes]
gi|298359776|gb|ADI77467.1| internalin A [Listeria monocytogenes]
gi|298359804|gb|ADI77481.1| internalin A [Listeria monocytogenes]
gi|298359874|gb|ADI77516.1| internalin A [Listeria monocytogenes]
gi|298360072|gb|ADI77615.1| internalin A [Listeria monocytogenes]
gi|298360106|gb|ADI77632.1| internalin A [Listeria monocytogenes]
gi|298360118|gb|ADI77638.1| internalin A [Listeria monocytogenes]
gi|298360218|gb|ADI77688.1| internalin A [Listeria monocytogenes]
gi|298360262|gb|ADI77710.1| internalin A [Listeria monocytogenes]
gi|298360280|gb|ADI77719.1| internalin A [Listeria monocytogenes]
gi|298360386|gb|ADI77772.1| internalin A [Listeria monocytogenes]
gi|298360468|gb|ADI77813.1| internalin A [Listeria monocytogenes]
gi|298360570|gb|ADI77864.1| internalin A [Listeria monocytogenes]
gi|298360722|gb|ADI77940.1| internalin A [Listeria monocytogenes]
gi|302034307|gb|ADK92307.1| internalin A [Listeria monocytogenes]
gi|302034309|gb|ADK92308.1| internalin A [Listeria monocytogenes]
gi|302034311|gb|ADK92309.1| internalin A [Listeria monocytogenes]
gi|302034313|gb|ADK92310.1| internalin A [Listeria monocytogenes]
gi|302034319|gb|ADK92313.1| internalin A [Listeria monocytogenes]
gi|302034321|gb|ADK92314.1| internalin A [Listeria monocytogenes]
gi|302034323|gb|ADK92315.1| internalin A [Listeria monocytogenes]
gi|302034325|gb|ADK92316.1| internalin A [Listeria monocytogenes]
gi|345536004|gb|AEO05444.1| internalin A [Listeria monocytogenes 10403S]
gi|404229501|emb|CBY50905.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC5850]
gi|443428772|gb|AGC92185.1| internalin A [Listeria monocytogenes]
gi|443428780|gb|AGC92189.1| internalin A [Listeria monocytogenes]
gi|443428864|gb|AGC92231.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|330930823|ref|XP_003303157.1| hypothetical protein PTT_15271 [Pyrenophora teres f. teres 0-1]
gi|311320995|gb|EFQ88745.1| hypothetical protein PTT_15271 [Pyrenophora teres f. teres 0-1]
Length = 398
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL L+NLK L + + TI GL L NLE L +S N L L GL N TNL+V+D+S
Sbjct: 242 GLDTLSNLKILSIQSNRLHTITGLENLTNLEELHISHN--LLTELSGLDNNTNLRVIDIS 299
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
N GL +L +L +C ++ I++
Sbjct: 300 ANPIEHLGGLKSLKHLTEFWASNCKLSDYAEIER 333
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL LT L++L L IT I+GL L NL+ L + SN LH ++ GL NLTNL+ L +S
Sbjct: 220 GLETLTALEELWLGKNKITEIKGLDTLSNLKILSIQSN-RLH-TITGLENLTNLEELHIS 277
Query: 87 GNQNLTTL-GLANLPNLKTLDLRDCGITTIQGIQ 119
N LT L GL N NL+ +D+ I + G++
Sbjct: 278 HNL-LTELSGLDNNTNLRVIDISANPIEHLGGLK 310
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L L+NL++++L + IQGL L LE L L N ++GL L+NL++L +
Sbjct: 199 LEGLSNLRQIELGANRVREIQGLETLTALEELWLGKNKI--TEIKGLDTLSNLKILSIQS 256
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
N+ T GL NL NL+ L + +T + G+
Sbjct: 257 NRLHTITGLENLTNLEELHISHNLLTELSGL 287
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 10 LDLSANYNITSGSLTRL----GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY 65
LD +N I S RL GL NLTNL++L + +T + GL NL +D+S+N
Sbjct: 243 LDTLSNLKILSIQSNRLHTITGLENLTNLEELHISHNLLTELSGLDNNTNLRVIDISANP 302
Query: 66 YLH-GSLEGLANLTNL 80
H G L+ L +LT
Sbjct: 303 IEHLGGLKSLKHLTEF 318
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 34 LKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTT 93
L ++DL I I+GL L +LDLS N H ++ L++LT L+ L N+ T
Sbjct: 139 LTEIDLYDNLIAHIKGLDAFTELTSLDLSFNKIKH--IKRLSHLTKLKDLYFVQNKISTI 196
Query: 94 LGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
L L NL+ ++L + IQG++ T+
Sbjct: 197 ENLEGLSNLRQIELGANRVREIQGLETLTA 226
>gi|297743503|emb|CBI36370.3| unnamed protein product [Vitis vinifera]
Length = 947
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 60/120 (50%), Gaps = 6/120 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGC---GITTIQGLAKLKNLE 57
A+L L++LDLS YN SG + L + + +LK L L G G QG +L L+
Sbjct: 309 FASLSNLEMLDLS--YNSLSG-IIPLSIRLMPHLKSLSLAGNHLNGSLQNQGFCQLNKLQ 365
Query: 58 ALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQG 117
LDLS N + L N T+L++LDLS N L LPNL +L+ D +G
Sbjct: 366 ELDLSYNLFQGILPPCLNNFTSLRLLDLSANLFSGNLSSPLLPNLTSLEYIDLSYNQFEG 425
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 57/138 (41%), Gaps = 29/138 (21%)
Query: 7 LQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTI------------------- 47
L LDLS +N +GSL+ A+L+NL+ LDL + I
Sbjct: 68 LMTLDLS--WNRFNGSLSIQDFASLSNLEVLDLSDNSFSGILPSSIRLLSSLKSLYLAGN 125
Query: 48 --------QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANL 99
QG + + LDLS N + L N T+L++LDLS N L L
Sbjct: 126 HLNGSLPNQGFCQFNKFQELDLSYNLFQGILPPCLNNFTSLRLLDLSSNLFSGNLSSPLL 185
Query: 100 PNLKTLDLRDCGITTIQG 117
PNL +L+ D +G
Sbjct: 186 PNLTSLEYIDLSYNQFEG 203
>gi|255038354|ref|YP_003088975.1| hypothetical protein Dfer_4609 [Dyadobacter fermentans DSM 18053]
gi|254951110|gb|ACT95810.1| Leucine rich repeat protein [Dyadobacter fermentans DSM 18053]
Length = 543
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 28 LANLTNLKKLDLDGCGITTIQ-------GLAKLKNLEALDLSSNYYLHGSLEGLANLTNL 80
+ LT LK LDL G G Q L L NLE LDLS NY ++ + NLTNL
Sbjct: 88 IGGLTALKHLDLSGAGEEFPQLFGLIPAELGNLTNLEYLDLSENYLFGPNIAVIGNLTNL 147
Query: 81 QVLDLSGNQNLTTLGLANLPNLKTLDL 107
+ L ++ +N+ ANL NL+ L L
Sbjct: 148 KHLSITPYENIPA-SFANLTNLEYLRL 173
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 1 LANLRYLQVL--DLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT-TIQG-LAKLKNL 56
L NL YL++ D N G + T LK L + G T TI L+ L NL
Sbjct: 165 LTNLEYLRLAADDYPMGVNTDVGPIPSF-FGTFTKLKSLIMRNAGATGTIPSSLSALSNL 223
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
E LDLS+N L G++ G+ N T L LDLSGN
Sbjct: 224 EVLDLSNNE-LTGTIPGVTNFTKLTNLDLSGN 254
>gi|130774769|gb|ABO32399.1| InlA [Listeria monocytogenes]
gi|130774773|gb|ABO32401.1| InlA [Listeria monocytogenes]
gi|167861932|gb|ACA05665.1| InlA [Listeria monocytogenes]
gi|167861992|gb|ACA05695.1| InlA [Listeria monocytogenes]
gi|167861994|gb|ACA05696.1| InlA [Listeria monocytogenes]
gi|167861998|gb|ACA05698.1| InlA [Listeria monocytogenes]
gi|167862004|gb|ACA05701.1| InlA [Listeria monocytogenes]
gi|167862034|gb|ACA05716.1| InlA [Listeria monocytogenes]
gi|194326169|emb|CAQ77243.1| internalin A [Listeria monocytogenes]
gi|298359894|gb|ADI77526.1| internalin A [Listeria monocytogenes]
gi|298360034|gb|ADI77596.1| internalin A [Listeria monocytogenes]
gi|298360110|gb|ADI77634.1| internalin A [Listeria monocytogenes]
gi|298360112|gb|ADI77635.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|404406915|ref|YP_006689630.1| internalin A [Listeria monocytogenes SLCC2376]
gi|130774829|gb|ABO32427.1| InlA [Listeria monocytogenes]
gi|167861972|gb|ACA05685.1| InlA [Listeria monocytogenes]
gi|194326147|emb|CAQ77232.1| internalin A [Listeria monocytogenes]
gi|404241064|emb|CBY62464.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2376]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|12054795|emb|CAC20635.1| internalin D [Listeria monocytogenes]
Length = 548
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
A+L + L G G+TTI+G+ L NL L+L N L L NLT + L+LSGN
Sbjct: 73 ADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITD--LTPLKNLTKITELELSGN 130
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTI 115
+A L ++KTLDL IT +
Sbjct: 131 PLKNVSAIAGLQSIKTLDLTSTQITDV 157
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 116 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 168
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + GN ++ L LANL L TL D I+ I
Sbjct: 169 LYLDLNQITN--ISPLAGLTNLQYLSI-GNAQVSDLTPLANLSKLTTLKADDNKISDI 223
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 138 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYL 191
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA+LPNL + L++ I+ +
Sbjct: 192 SIGNAQV--SDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDV 245
>gi|85679226|gb|ABC72029.1| InlA [Listeria monocytogenes]
Length = 791
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 202 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 259
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 260 NQ-LKDIGTLASLTNLTDLDLANNQIS 285
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 137 LANLSNLTGLTLFNNQITDIDSLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 193
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 194 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 228
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 159 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 215
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 216 NKVSDISVLAKLTNLESL 233
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 202 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 256
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 257 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 300
>gi|17536161|ref|NP_495653.1| Protein T09A5.9 [Caenorhabditis elegans]
gi|1176604|sp|P45969.1|YNZ9_CAEEL RecName: Full=Uncharacterized protein T09A5.9
gi|3879646|emb|CAA85336.1| Protein T09A5.9 [Caenorhabditis elegans]
Length = 326
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LT LK L+L I I+ + L NL+ L + N LEG+ L L VL L G
Sbjct: 143 LEALTQLKLLELGDNRIKKIENIGHLVNLDELFIGKNKI--RQLEGVETLQKLSVLSLPG 200
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ + + L NLK L L D G+ I G++ T
Sbjct: 201 NRIVKIENVEQLNNLKELYLSDQGLQDIHGVEPLT 235
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G+ L L L L G I I+ + +L NL+ L LS + G+ LTNL +LD++
Sbjct: 186 GVETLQKLSVLSLPGNRIVKIENVEQLNNLKELYLSDQGL--QDIHGVEPLTNLLLLDVA 243
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N+ T G+ L +L D + + I+Q +
Sbjct: 244 NNEIKTFSGVERLESLNDFWANDNKVESFSEIEQLSK 280
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
+++L L LDL +T I L L NL +LDLS N + GL LT L+ L L
Sbjct: 77 ISSLVTLTSLDLYENQLTEISHLESLVNLVSLDLSYNRI--RQINGLDKLTKLETLYLVS 134
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
N+ L L LK L+L D I I+ I
Sbjct: 135 NKIEKIENLEALTQLKLLELGDNRIKKIENI 165
>gi|16802477|ref|NP_463962.1| internalin A [Listeria monocytogenes EGD-e]
gi|386049359|ref|YP_005967350.1| internalin-A [Listeria monocytogenes FSL R2-561]
gi|404282867|ref|YP_006683764.1| internalin A [Listeria monocytogenes SLCC2372]
gi|403399437|sp|P0DJM0.1|INLA_LISMO RecName: Full=Internalin-A; Flags: Precursor
gi|12054782|emb|CAC20628.1| internalin A [Listeria monocytogenes]
gi|16409810|emb|CAC98512.1| Internalin A [Listeria monocytogenes EGD-e]
gi|130774817|gb|ABO32421.1| InlA [Listeria monocytogenes]
gi|130774821|gb|ABO32423.1| InlA [Listeria monocytogenes]
gi|130774823|gb|ABO32424.1| InlA [Listeria monocytogenes]
gi|150371782|dbj|BAF65680.1| internalin A [Listeria monocytogenes]
gi|150371794|dbj|BAF65686.1| internalin A [Listeria monocytogenes]
gi|150371804|dbj|BAF65691.1| internalin A [Listeria monocytogenes]
gi|150371820|dbj|BAF65699.1| internalin A [Listeria monocytogenes]
gi|150371846|dbj|BAF65712.1| internalin A [Listeria monocytogenes]
gi|150371852|dbj|BAF65715.1| internalin A [Listeria monocytogenes]
gi|150371856|dbj|BAF65717.1| internalin A [Listeria monocytogenes]
gi|150371860|dbj|BAF65719.1| internalin A [Listeria monocytogenes]
gi|150371868|dbj|BAF65723.1| internalin A [Listeria monocytogenes]
gi|167861980|gb|ACA05689.1| InlA [Listeria monocytogenes]
gi|194239382|emb|CAQ76831.1| internalin A [Listeria monocytogenes]
gi|298359818|gb|ADI77488.1| internalin A [Listeria monocytogenes]
gi|298359832|gb|ADI77495.1| internalin A [Listeria monocytogenes]
gi|298360054|gb|ADI77606.1| internalin A [Listeria monocytogenes]
gi|298360128|gb|ADI77643.1| internalin A [Listeria monocytogenes]
gi|298360212|gb|ADI77685.1| internalin A [Listeria monocytogenes]
gi|298360216|gb|ADI77687.1| internalin A [Listeria monocytogenes]
gi|298360256|gb|ADI77707.1| internalin A [Listeria monocytogenes]
gi|298360522|gb|ADI77840.1| internalin A [Listeria monocytogenes]
gi|346423205|gb|AEO24730.1| internalin-A [Listeria monocytogenes FSL R2-561]
gi|404232369|emb|CBY53772.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2372]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|340052071|emb|CBY84387.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|313485079|gb|ADR53010.1| InlA [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|422408524|ref|ZP_16485485.1| internalin A, partial [Listeria monocytogenes FSL F2-208]
gi|313610685|gb|EFR85741.1| internalin A [Listeria monocytogenes FSL F2-208]
Length = 439
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE L ++N + L LTNL L L+G
Sbjct: 78 LANLTTLERLDISSNKVSDISVLAKLTNLERLIATNNQI--SDITPLGILTNLDELSLNG 135
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ L +G LA+L NL +LD+ + I+ + + T
Sbjct: 136 NQ-LKDIGTLASLTNLTSLDVANNQISNLAPLSGLT 170
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 10/126 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL++L I+ I L L NL+ L
Sbjct: 78 LANLTTLERLDISSN-KVSDISV----LAKLTNLERLIATNNQISDITPLGILTNLDELS 132
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL---RDCGITTIQG 117
L+ N + LA+LTNL LD++ NQ L+ L L L+L + I+ I+G
Sbjct: 133 LNGNQL--KDIGTLASLTNLTSLDVANNQISNLAPLSGLTKLTELELGYNQISNISPIEG 190
Query: 118 IQQFTS 123
+ TS
Sbjct: 191 LTALTS 196
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
L NLTNL +L++ G I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 34 ALKNLTNLNRLEITGNTISDISVLSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDIS 90
Query: 87 GNQNLTTLGLANLPNLKTL 105
N+ LA L NL+ L
Sbjct: 91 SNKVSDISVLAKLTNLERL 109
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+++ N S+ L+ LT+LQ L G
Sbjct: 13 LANLTNLTGLTLFNNQITDIDALKNLTNLNRLEITGNTISDISV--LSGLTSLQQLSF-G 69
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 70 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 104
>gi|298360122|gb|ADI77640.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|294358397|gb|ADE73851.1| InlA [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|392894927|ref|NP_001254924.1| Protein K10D2.8 [Caenorhabditis elegans]
gi|351064478|emb|CCD72863.1| Protein K10D2.8 [Caenorhabditis elegans]
Length = 335
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L++L NL++L L I I+GL + L+ L L N +EGL L+ L+ + L+
Sbjct: 155 LSHLVNLERLFLGANQIRKIEGLDGMAQLKELSLPGNAL--QIIEGLDTLSGLKSISLAQ 212
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
N GL+ L NLK+LDL D I ++ ++QF
Sbjct: 213 NGIRKIDGLSGLTNLKSLDLNDNIIEKLENVEQF 246
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 8 QVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYL 67
++++L + + + +T GL T +K L+ I ++ L+ L NLE L L +N
Sbjct: 113 ELINLEELHLVHNKIITIEGLETNTAMKYLEFGDNRIQKMENLSHLVNLERLFLGANQI- 171
Query: 68 HGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
+EGL + L+ L L GN GL L LK++ L GI I G+ T+
Sbjct: 172 -RKIEGLDGMAQLKELSLPGNALQIIEGLDTLSGLKSISLAQNGIRKIDGLSGLTN 226
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 31 LTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN 90
LT+L +L+L+ I ++ L L NL LD+S N +EGL+ L NL+ L L N+
Sbjct: 70 LTSLTRLNLNDNQIEKLENLETLVNLVFLDVSYNRI--TKIEGLSELINLEELHLVHNKI 127
Query: 91 LTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
+T GL +K L+ D I ++ + +
Sbjct: 128 ITIEGLETNTAMKYLEFGDNRIQKMENLSHLVN 160
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL + LK+L L G + I+GL L L+++ L+ N ++GL+ LTNL+ LDL+
Sbjct: 176 GLDGMAQLKELSLPGNALQIIEGLDTLSGLKSISLAQNGI--RKIDGLSGLTNLKSLDLN 233
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
N + + +L +R + Q ++Q
Sbjct: 234 DNIIEKLENVEQFKGISSLMIRKNKLNCWQDVRQLKK 270
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 8/122 (6%)
Query: 8 QVLDLSANYNITSGSLTR------LGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDL 61
+++ + + +IT SL R N ++ L L + I L +L L+L
Sbjct: 19 EIISHNVDEDITELSLIRHRIQKIWQFENTPGIRDLSLRWNLLKKIDHFQCLTSLTRLNL 78
Query: 62 SSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
+ N LE L L NL LD+S N+ GL+ L NL+ L L I TI+G++
Sbjct: 79 NDNQI--EKLENLETLVNLVFLDVSYNRITKIEGLSELINLEELHLVHNKIITIEGLETN 136
Query: 122 TS 123
T+
Sbjct: 137 TA 138
>gi|194239392|emb|CAQ76836.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT + L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|130774759|gb|ABO32394.1| InlA [Listeria monocytogenes]
gi|298360132|gb|ADI77645.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|47096455|ref|ZP_00234048.1| internalin A precursor [Listeria monocytogenes str. 1/2a F6854]
gi|254913677|ref|ZP_05263689.1| internalin A [Listeria monocytogenes J2818]
gi|254937992|ref|ZP_05269689.1| internalin A [Listeria monocytogenes F6900]
gi|386046091|ref|YP_005964423.1| internalin A [Listeria monocytogenes J0161]
gi|47015176|gb|EAL06116.1| internalin A precursor [Listeria monocytogenes str. 1/2a F6854]
gi|194239410|emb|CAQ76845.1| internalin A [Listeria monocytogenes]
gi|223006792|gb|ACM69353.1| internalin A [Listeria monocytogenes]
gi|223006794|gb|ACM69354.1| internalin A [Listeria monocytogenes]
gi|258610604|gb|EEW23212.1| internalin A [Listeria monocytogenes F6900]
gi|293591690|gb|EFG00025.1| internalin A [Listeria monocytogenes J2818]
gi|298359952|gb|ADI77555.1| internalin A [Listeria monocytogenes]
gi|298359956|gb|ADI77557.1| internalin A [Listeria monocytogenes]
gi|298359986|gb|ADI77572.1| internalin A [Listeria monocytogenes]
gi|298360086|gb|ADI77622.1| internalin A [Listeria monocytogenes]
gi|298360130|gb|ADI77644.1| internalin A [Listeria monocytogenes]
gi|298360206|gb|ADI77682.1| internalin A [Listeria monocytogenes]
gi|298360572|gb|ADI77865.1| internalin A [Listeria monocytogenes]
gi|298360644|gb|ADI77901.1| internalin A [Listeria monocytogenes]
gi|345533082|gb|AEO02523.1| internalin A [Listeria monocytogenes J0161]
gi|443428774|gb|AGC92186.1| internalin A [Listeria monocytogenes]
gi|443428776|gb|AGC92187.1| internalin A [Listeria monocytogenes]
gi|443428868|gb|AGC92233.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT + L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|404330996|ref|ZP_10971444.1| putative surface protein, responsible for cell interaction;
contains cell adhesion domain and ChW-repeats
[Sporolactobacillus vineae DSM 21990 = SL153]
Length = 359
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G+ NL++L L L+ I+ I L KLK+L++LDL++N S+ L NL ++ L LS
Sbjct: 79 GIENLSSLTDLRLENNLISDITPLQKLKDLQSLDLTNNQI--QSITPLQNLDKMERLFLS 136
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
NQ L NL L TL L + I +I GI +
Sbjct: 137 DNQIQDIDDLNNLSRLNTLMLENNQIKSINGINK 170
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
+ L NLK L I+ L KL +L LDLS+N + L+ L+NLT L+VLDLS
Sbjct: 189 AVQQLLNLKVLRAADNNISDAYALTKLSDLRVLDLSNNPVVL--LKPLSNLTELRVLDLS 246
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
++ L L ++ LDL D I I ++ TS
Sbjct: 247 HSRVKELDPLRGLTRIQVLDLNDDKIQNIGPLENLTS 283
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL+ L+ +A+ NI+ L L++L+ LDL + ++ L+ L L LD
Sbjct: 193 LLNLKVLR----AADNNISDA----YALTKLSDLRVLDLSNNPVVLLKPLSNLTELRVLD 244
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDL 107
LS + L+ L LT +QVLDL+ ++ L NL +LK L L
Sbjct: 245 LSHSRV--KELDPLRGLTRIQVLDLNDDKIQNIGPLENLTSLKELKL 289
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L L L+VLDLS N + L +NLT L+ LDL + + L L ++ LD
Sbjct: 212 LTKLSDLRVLDLSNNPVVLLKPL-----SNLTELRVLDLSHSRVKELDPLRGLTRIQVLD 266
Query: 61 LSSNYYLH-GSLEGLANLTNLQVLDLSGNQ 89
L+ + + G LE NLT+L+ L L+GNQ
Sbjct: 267 LNDDKIQNIGPLE---NLTSLKELKLTGNQ 293
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
+++ NLK LD I + G+ L +L L L +N L + L L +LQ LDL+ N
Sbjct: 59 SDVNNLKTLDASDNHIKDLNGIENLSSLTDLRLENN--LISDITPLQKLKDLQSLDLTNN 116
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
Q + L NL ++ L L D I I +
Sbjct: 117 QIQSITPLQNLDKMERLFLSDNQIQDIDDL 146
>gi|371942116|gb|AEX60870.1| internaline [Listeria monocytogenes]
Length = 789
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|322952092|gb|ADX21045.1| internalin A [Listeria monocytogenes]
gi|322952094|gb|ADX21046.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|298360234|gb|ADI77696.1| internalin A [Listeria monocytogenes]
gi|298360500|gb|ADI77829.1| internalin A [Listeria monocytogenes]
gi|298360708|gb|ADI77933.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT + L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|298359882|gb|ADI77520.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT + L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|255583082|ref|XP_002532308.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis]
gi|223527977|gb|EEF30060.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis]
Length = 711
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 12/93 (12%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT----TIQGLAKLKNL 56
L NL++L LDLS + + L +G LT+LK L L CG+T + QGL +LK+L
Sbjct: 283 LRNLQHLH-LDLST---LNNSFLQSIG--TLTSLKTLSLTQCGLTGTIPSTQGLCELKHL 336
Query: 57 EALDLSSNYYLHGSLEG-LANLTNLQVLDLSGN 88
+ LD+S N L G+L LANLT+LQ LD+S N
Sbjct: 337 KDLDISFN-SLSGNLPWCLANLTSLQRLDISSN 368
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 48/108 (44%), Gaps = 31/108 (28%)
Query: 43 GITTIQG---LAKLKNLEALDLSSNYY-----------------------LHGS--LEGL 74
GI I+G L KL NLE LDLS N++ L GS L+G
Sbjct: 221 GILNIEGGEELLKLNNLEFLDLSVNHFDNNVFSFLKGLLSLKTLKIRHNQLEGSFKLKGF 280
Query: 75 ANLTNLQ--VLDLSGNQNLTTLGLANLPNLKTLDLRDCGIT-TIQGIQ 119
L NLQ LDLS N + L +LKTL L CG+T TI Q
Sbjct: 281 PILRNLQHLHLDLSTLNNSFLQSIGTLTSLKTLSLTQCGLTGTIPSTQ 328
>gi|220930258|ref|YP_002507167.1| chitinase II [Clostridium cellulolyticum H10]
gi|220000586|gb|ACL77187.1| chitinase II [Clostridium cellulolyticum H10]
Length = 587
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 11 DLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH 68
DL+ Y I +G T L LTNL+ LDL +T++ LA LKNL L L Y +
Sbjct: 446 DLAKVYRLKIPAGYKTLNDLKQLTNLEYLDLSNTKLTSVSALASLKNLRVLYL----YKN 501
Query: 69 G--SLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
G + + LT LQVL ++GN+ LA L L L +R+ I + +
Sbjct: 502 GIKDISPIKGLTKLQVLSINGNKVSNISALAGLTQLTELYIRENTINDFSPVAK 555
>gi|242024177|ref|XP_002432506.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212517944|gb|EEB19768.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 763
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL+ L L++LDL G I I+ L LKNL L+LS+N +E L + T L+ +DL
Sbjct: 76 GLSQLIYLEELDLSGNNIGAIENLKDLKNLRELNLSNNNI--KLIEHLIDNTELEKIDLC 133
Query: 87 GNQNLTTLG-LANLPNLKTLDLRDCGITTIQGIQQ 120
N N+T + +++L NLK L L D IT ++ ++
Sbjct: 134 SN-NITFISDISHLKNLKKLFLHDNKITNLRHCEK 167
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 21/122 (17%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L+ L YL+ LDLS N NI G++ L +L NL++L+L I I+ L LE +D
Sbjct: 77 LSQLIYLEELDLSGN-NI--GAIE--NLKDLKNLRELNLSNNNIKLIEHLIDNTELEKID 131
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQ 120
L SN + +++L NL+ L L N K +LR C Q I+
Sbjct: 132 LCSNNITF--ISDISHLKNLKKLFLHDN--------------KITNLRHCEKNLPQSIES 175
Query: 121 FT 122
T
Sbjct: 176 IT 177
>gi|167861900|gb|ACA05649.1| InlA [Listeria monocytogenes]
gi|194326161|emb|CAQ77239.1| internalin A [Listeria monocytogenes]
gi|298360364|gb|ADI77761.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|194239378|emb|CAQ76829.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|195163017|ref|XP_002022350.1| GL26536 [Drosophila persimilis]
gi|194104311|gb|EDW26354.1| GL26536 [Drosophila persimilis]
Length = 832
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG-LAKLKNLEAL 59
L LR L+ LDLS N I+ + G+ L L L LD I ++ G LA L NL L
Sbjct: 363 LHGLRLLKRLDLSHN-RISRLLPSTKGVQELV-LFALRLDNNQIVSLDGALAGLGNLRIL 420
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQ 116
DLS+N H L + L++LD++GNQ L L LPNLK L L IT ++
Sbjct: 421 DLSANRLEHLLLGDFDGMQRLEILDMTGNQLVELKPLETTMLPNLKILKLAFNNITKLE 479
>gi|130774809|gb|ABO32417.1| InlA [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|371942076|gb|AEX60850.1| internaline [Listeria monocytogenes]
gi|371942078|gb|AEX60851.1| internaline [Listeria monocytogenes]
gi|371942082|gb|AEX60853.1| internaline [Listeria monocytogenes]
Length = 789
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|371942068|gb|AEX60846.1| internaline [Listeria monocytogenes]
gi|371942088|gb|AEX60856.1| internaline [Listeria monocytogenes]
gi|371942106|gb|AEX60865.1| internaline [Listeria monocytogenes]
gi|371942134|gb|AEX60879.1| internaline [Listeria monocytogenes]
Length = 790
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|313485075|gb|ADR53008.1| InlA [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|167862002|gb|ACA05700.1| InlA [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|167861908|gb|ACA05653.1| InlA [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|167861906|gb|ACA05652.1| InlA [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|301118238|ref|XP_002906847.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108196|gb|EEY66248.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 648
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 67/137 (48%), Gaps = 20/137 (14%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG---LANLTNLKKLDLDGC------GITTIQGLA 51
LA L+ LQ L+L + G+LT G LA +T+L L+L C GI+++ L
Sbjct: 239 LARLKNLQTLNL---WYCNQGALTDGGISALAEVTSLTSLNLSNCSQLTDEGISSLSTLV 295
Query: 52 KLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG---LANLPNLKTLDLR 108
KL++LE ++ LA L NL LD++G N+T G L N P L + +L
Sbjct: 296 KLRHLEIANVGE--VTDQGFLALAPLVNLVTLDVAGCYNITDAGTEVLVNFPKLASCNLW 353
Query: 109 DC---GITTIQGIQQFT 122
C G T Q ++ T
Sbjct: 354 YCSEIGDATFQHMESLT 370
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 63/122 (51%), Gaps = 11/122 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA-- 58
+A LR L LD+ + +N+T L L + L LK L L GC +G+A L +L +
Sbjct: 391 IAKLRNLTSLDMVSCFNVTDEGLNEL--SKLNRLKSLYLGGCSGIRDEGIAALSHLSSLV 448
Query: 59 -LDLSS-----NYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGI 112
LDLS+ N L G + L NLTNL ++ + + LA L LKTL+L +C +
Sbjct: 449 ILDLSNCRQVGNKALLG-IGALRNLTNLNLMRCNRIDDDGIAHLAGLTRLKTLNLANCRL 507
Query: 113 TT 114
T
Sbjct: 508 LT 509
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 56/102 (54%), Gaps = 15/102 (14%)
Query: 29 ANLTNLKKLDLDGC---GITTIQGLAKLKNLEALDLSSNYYLH------GSLEGLANLTN 79
+NL+ L L+L GC G I+ LA+LKNL+ L+L +Y + G + LA +T+
Sbjct: 215 SNLSKLNYLNLRGCSQVGDNGIRALARLKNLQTLNL---WYCNQGALTDGGISALAEVTS 271
Query: 80 LQVLDLSGNQNLTTLGLANLP---NLKTLDLRDCGITTIQGI 118
L L+LS LT G+++L L+ L++ + G T QG
Sbjct: 272 LTSLNLSNCSQLTDEGISSLSTLVKLRHLEIANVGEVTDQGF 313
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 28 LANLTNLKKLDLDGCGITTIQG---LAKLKNLEALDLS-SNYYLHGSLEGLANLTNLQVL 83
LA LT LK L+L C + T + +A++ LE+L L N + L+ LT LQ +
Sbjct: 491 LAGLTRLKTLNLANCRLLTDRATKTVAQMTGLESLVLWYCNKLTDAGILNLSTLTKLQSI 550
Query: 84 DLSGNQNLTTLGLA---NLPNLKTLDLRDCGITTIQGI 118
DL+ LT L N+PNL +LDL +C + + +G+
Sbjct: 551 DLASCSKLTDASLEAFLNMPNLTSLDLGNCCLLSDEGM 588
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG---LAKLKNLE 57
LA L L+ L+L AN + + T+ +A +T L+ L L C T G L+ L L+
Sbjct: 491 LAGLTRLKTLNL-ANCRLLTDRATK-TVAQMTGLESLVLWYCNKLTDAGILNLSTLTKLQ 548
Query: 58 ALDLSSNYYL-HGSLEGLANLTNLQVLDLSGNQNLTT----LGLANLPNLKTLDLRDCGI 112
++DL+S L SLE N+ NL LDL GN L + L L+ + +L +L+L +CG
Sbjct: 549 SIDLASCSKLTDASLEAFLNMPNLTSLDL-GNCCLLSDEGMLTLSKVTSLTSLNLSECGE 607
Query: 113 TTIQGIQQFTS 123
T G++ +
Sbjct: 608 ITDTGLEHLKT 618
>gi|254854324|ref|ZP_05243672.1| internalin A [Listeria monocytogenes FSL R2-503]
gi|300766414|ref|ZP_07076370.1| internalin A precursor [Listeria monocytogenes FSL N1-017]
gi|404279991|ref|YP_006680889.1| internalin A [Listeria monocytogenes SLCC2755]
gi|404285805|ref|YP_006692391.1| internalin A [Listeria monocytogenes serotype 7 str. SLCC2482]
gi|405754532|ref|YP_006677996.1| internalin A [Listeria monocytogenes SLCC2540]
gi|130774761|gb|ABO32395.1| InlA [Listeria monocytogenes]
gi|130774765|gb|ABO32397.1| InlA [Listeria monocytogenes]
gi|130774775|gb|ABO32402.1| InlA [Listeria monocytogenes]
gi|150371872|dbj|BAF65725.1| internalin A [Listeria monocytogenes]
gi|150371878|dbj|BAF65728.1| internalin A [Listeria monocytogenes]
gi|150371880|dbj|BAF65729.1| internalin A [Listeria monocytogenes]
gi|150371882|dbj|BAF65730.1| internalin A [Listeria monocytogenes]
gi|150371884|dbj|BAF65731.1| internalin A [Listeria monocytogenes]
gi|150371886|dbj|BAF65732.1| internalin A [Listeria monocytogenes]
gi|167861936|gb|ACA05667.1| InlA [Listeria monocytogenes]
gi|167861950|gb|ACA05674.1| InlA [Listeria monocytogenes]
gi|167861974|gb|ACA05686.1| InlA [Listeria monocytogenes]
gi|167861990|gb|ACA05694.1| InlA [Listeria monocytogenes]
gi|194239386|emb|CAQ76833.1| internalin A [Listeria monocytogenes]
gi|194239390|emb|CAQ76835.1| internalin A [Listeria monocytogenes]
gi|194239398|emb|CAQ76839.1| internalin A [Listeria monocytogenes]
gi|194326159|emb|CAQ77238.1| internalin A [Listeria monocytogenes]
gi|223006782|gb|ACM69348.1| internalin A [Listeria monocytogenes]
gi|258607720|gb|EEW20328.1| internalin A [Listeria monocytogenes FSL R2-503]
gi|290350822|dbj|BAI78332.1| internalin A [Listeria monocytogenes]
gi|290350824|dbj|BAI78333.1| internalin A [Listeria monocytogenes]
gi|298359734|gb|ADI77446.1| internalin A [Listeria monocytogenes]
gi|298359740|gb|ADI77449.1| internalin A [Listeria monocytogenes]
gi|298359774|gb|ADI77466.1| internalin A [Listeria monocytogenes]
gi|298359822|gb|ADI77490.1| internalin A [Listeria monocytogenes]
gi|298359826|gb|ADI77492.1| internalin A [Listeria monocytogenes]
gi|298359830|gb|ADI77494.1| internalin A [Listeria monocytogenes]
gi|298359834|gb|ADI77496.1| internalin A [Listeria monocytogenes]
gi|298359836|gb|ADI77497.1| internalin A [Listeria monocytogenes]
gi|298359846|gb|ADI77502.1| internalin A [Listeria monocytogenes]
gi|298359848|gb|ADI77503.1| internalin A [Listeria monocytogenes]
gi|298359854|gb|ADI77506.1| internalin A [Listeria monocytogenes]
gi|298359856|gb|ADI77507.1| internalin A [Listeria monocytogenes]
gi|298359868|gb|ADI77513.1| internalin A [Listeria monocytogenes]
gi|298359870|gb|ADI77514.1| internalin A [Listeria monocytogenes]
gi|298359888|gb|ADI77523.1| internalin A [Listeria monocytogenes]
gi|298359920|gb|ADI77539.1| internalin A [Listeria monocytogenes]
gi|298359954|gb|ADI77556.1| internalin A [Listeria monocytogenes]
gi|298359968|gb|ADI77563.1| internalin A [Listeria monocytogenes]
gi|298359972|gb|ADI77565.1| internalin A [Listeria monocytogenes]
gi|298359984|gb|ADI77571.1| internalin A [Listeria monocytogenes]
gi|298359998|gb|ADI77578.1| internalin A [Listeria monocytogenes]
gi|298360002|gb|ADI77580.1| internalin A [Listeria monocytogenes]
gi|298360006|gb|ADI77582.1| internalin A [Listeria monocytogenes]
gi|298360040|gb|ADI77599.1| internalin A [Listeria monocytogenes]
gi|298360042|gb|ADI77600.1| internalin A [Listeria monocytogenes]
gi|298360044|gb|ADI77601.1| internalin A [Listeria monocytogenes]
gi|298360050|gb|ADI77604.1| internalin A [Listeria monocytogenes]
gi|298360080|gb|ADI77619.1| internalin A [Listeria monocytogenes]
gi|298360090|gb|ADI77624.1| internalin A [Listeria monocytogenes]
gi|298360100|gb|ADI77629.1| internalin A [Listeria monocytogenes]
gi|298360126|gb|ADI77642.1| internalin A [Listeria monocytogenes]
gi|298360150|gb|ADI77654.1| internalin A [Listeria monocytogenes]
gi|298360156|gb|ADI77657.1| internalin A [Listeria monocytogenes]
gi|298360166|gb|ADI77662.1| internalin A [Listeria monocytogenes]
gi|298360188|gb|ADI77673.1| internalin A [Listeria monocytogenes]
gi|298360190|gb|ADI77674.1| internalin A [Listeria monocytogenes]
gi|298360194|gb|ADI77676.1| internalin A [Listeria monocytogenes]
gi|298360220|gb|ADI77689.1| internalin A [Listeria monocytogenes]
gi|298360222|gb|ADI77690.1| internalin A [Listeria monocytogenes]
gi|298360238|gb|ADI77698.1| internalin A [Listeria monocytogenes]
gi|298360246|gb|ADI77702.1| internalin A [Listeria monocytogenes]
gi|298360260|gb|ADI77709.1| internalin A [Listeria monocytogenes]
gi|298360264|gb|ADI77711.1| internalin A [Listeria monocytogenes]
gi|298360266|gb|ADI77712.1| internalin A [Listeria monocytogenes]
gi|298360294|gb|ADI77726.1| internalin A [Listeria monocytogenes]
gi|298360298|gb|ADI77728.1| internalin A [Listeria monocytogenes]
gi|298360312|gb|ADI77735.1| internalin A [Listeria monocytogenes]
gi|298360318|gb|ADI77738.1| internalin A [Listeria monocytogenes]
gi|298360356|gb|ADI77757.1| internalin A [Listeria monocytogenes]
gi|298360368|gb|ADI77763.1| internalin A [Listeria monocytogenes]
gi|298360396|gb|ADI77777.1| internalin A [Listeria monocytogenes]
gi|298360398|gb|ADI77778.1| internalin A [Listeria monocytogenes]
gi|298360400|gb|ADI77779.1| internalin A [Listeria monocytogenes]
gi|298360428|gb|ADI77793.1| internalin A [Listeria monocytogenes]
gi|298360434|gb|ADI77796.1| internalin A [Listeria monocytogenes]
gi|298360448|gb|ADI77803.1| internalin A [Listeria monocytogenes]
gi|298360462|gb|ADI77810.1| internalin A [Listeria monocytogenes]
gi|298360498|gb|ADI77828.1| internalin A [Listeria monocytogenes]
gi|298360502|gb|ADI77830.1| internalin A [Listeria monocytogenes]
gi|298360510|gb|ADI77834.1| internalin A [Listeria monocytogenes]
gi|298360514|gb|ADI77836.1| internalin A [Listeria monocytogenes]
gi|298360558|gb|ADI77858.1| internalin A [Listeria monocytogenes]
gi|298360560|gb|ADI77859.1| internalin A [Listeria monocytogenes]
gi|298360566|gb|ADI77862.1| internalin A [Listeria monocytogenes]
gi|298360586|gb|ADI77872.1| internalin A [Listeria monocytogenes]
gi|298360614|gb|ADI77886.1| internalin A [Listeria monocytogenes]
gi|298360630|gb|ADI77894.1| internalin A [Listeria monocytogenes]
gi|298360638|gb|ADI77898.1| internalin A [Listeria monocytogenes]
gi|298360652|gb|ADI77905.1| internalin A [Listeria monocytogenes]
gi|298360680|gb|ADI77919.1| internalin A [Listeria monocytogenes]
gi|298360682|gb|ADI77920.1| internalin A [Listeria monocytogenes]
gi|298360694|gb|ADI77926.1| internalin A [Listeria monocytogenes]
gi|298360704|gb|ADI77931.1| internalin A [Listeria monocytogenes]
gi|298360706|gb|ADI77932.1| internalin A [Listeria monocytogenes]
gi|300512880|gb|EFK39971.1| internalin A precursor [Listeria monocytogenes FSL N1-017]
gi|302034315|gb|ADK92311.1| internalin A [Listeria monocytogenes]
gi|302034317|gb|ADK92312.1| internalin A [Listeria monocytogenes]
gi|404223732|emb|CBY75094.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2540]
gi|404226626|emb|CBY48031.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2755]
gi|404244734|emb|CBY02959.1| internalin A (LPXTG motif) [Listeria monocytogenes serotype 7 str.
SLCC2482]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|125978433|ref|XP_001353249.1| GA16850 [Drosophila pseudoobscura pseudoobscura]
gi|54642003|gb|EAL30752.1| GA16850 [Drosophila pseudoobscura pseudoobscura]
Length = 807
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQG-LAKLKNLEAL 59
L LR L+ LDLS N I+ + G+ L L L LD I ++ G LA L NL L
Sbjct: 338 LHGLRLLKRLDLSHN-RISRLLPSTKGVQELV-LFALRLDNNQIVSLDGALAGLGNLRIL 395
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLDLRDCGITTIQ 116
DLS+N H L + L++LD++GNQ L L LPNLK L L IT ++
Sbjct: 396 DLSANRLEHLLLGDFDGMQRLEILDMTGNQLVELKPLETTMLPNLKILKLAFNNITKLE 454
>gi|83629799|gb|ABC26561.1| internalin C2 [Listeria monocytogenes]
gi|83629815|gb|ABC26569.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 24 TRLGLANLTN-LKKLDLDG--------CGITTIQGLAKLKNLEALDLSSNYYLHGSLEGL 74
T G +N+T+ + + +LDG G+TTI+G+ L NL +L+L N + L L
Sbjct: 58 TATGKSNVTDTVTQAELDGIATLSAFNTGVTTIEGIQYLNNLISLELKDNQITN--LTPL 115
Query: 75 ANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
NLT + L+LSGN +A L ++KTLDL IT +
Sbjct: 116 KNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 156
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 115 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 167
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + GN ++ L LANL L TL D I+ I
Sbjct: 168 LYLDLNQITN--ISPLAGLTNLQYLSI-GNAQVSDLTPLANLSKLTTLKADDNKISDI 222
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 137 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYL 190
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA+LPNL + L++ I+ +
Sbjct: 191 SIGNAQV--SDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDV 244
>gi|371942090|gb|AEX60857.1| internaline [Listeria monocytogenes]
Length = 790
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|371942070|gb|AEX60847.1| internaline [Listeria monocytogenes]
Length = 789
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|357140497|ref|XP_003571803.1| PREDICTED: protein phosphatase 1 regulatory subunit pprA-like
[Brachypodium distachyon]
Length = 339
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 26 LGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
+ L L ++KKL L +T++ GL + LE L LS N +EGL+ L NL+VLD+
Sbjct: 202 INLCGLKSIKKLSLQSNRLTSMNGLQECVALEELYLSHNGI--QKMEGLSTLQNLRVLDV 259
Query: 86 SGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQ 119
S N+ + + L L+ L L D I ++ GI+
Sbjct: 260 SSNKLIAIEDIETLTRLEDLWLNDNQIPSLDGIE 293
>gi|298359924|gb|ADI77541.1| internalin A [Listeria monocytogenes]
gi|298359926|gb|ADI77542.1| internalin A [Listeria monocytogenes]
gi|298360172|gb|ADI77665.1| internalin A [Listeria monocytogenes]
gi|298360388|gb|ADI77773.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|167862012|gb|ACA05705.1| InlA [Listeria monocytogenes]
Length = 797
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|223698619|gb|ACN18986.1| truncated internalin A [Listeria monocytogenes]
gi|223698691|gb|ACN19034.1| truncated internalin A [Listeria monocytogenes]
gi|223698706|gb|ACN19044.1| truncated internalin A [Listeria monocytogenes]
gi|223698715|gb|ACN19050.1| truncated internalin A [Listeria monocytogenes]
gi|223698781|gb|ACN19094.1| truncated internalin A [Listeria monocytogenes]
gi|223698784|gb|ACN19096.1| truncated internalin A [Listeria monocytogenes]
gi|223698814|gb|ACN19116.1| truncated internalin A [Listeria monocytogenes]
gi|223698838|gb|ACN19132.1| truncated internalin A [Listeria monocytogenes]
gi|223698844|gb|ACN19136.1| truncated internalin A [Listeria monocytogenes]
gi|223698850|gb|ACN19140.1| truncated internalin A [Listeria monocytogenes]
gi|223698856|gb|ACN19144.1| truncated internalin A [Listeria monocytogenes]
gi|223698880|gb|ACN19160.1| truncated internalin A [Listeria monocytogenes]
gi|223698958|gb|ACN19212.1| truncated internalin A [Listeria monocytogenes]
gi|223698967|gb|ACN19218.1| truncated internalin A [Listeria monocytogenes]
gi|223698970|gb|ACN19220.1| truncated internalin A [Listeria monocytogenes]
gi|223698973|gb|ACN19222.1| truncated internalin A [Listeria monocytogenes]
gi|223698982|gb|ACN19228.1| truncated internalin A [Listeria monocytogenes]
Length = 614
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 118 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 175
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 176 NQ-LKDIGTLASLTNLTDLDLANNQIS 201
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 53 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 109
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 110 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 144
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 75 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 131
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 132 NKVSDISVLAKLTNLESL 149
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 118 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 172
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 173 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 216
>gi|219821330|gb|ACL37798.1| internalin A [Listeria monocytogenes]
gi|219821348|gb|ACL37810.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 145 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 202
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 203 NQ-LKDIGTLASLTNLTDLDLANNQIS 228
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 80 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 136
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 137 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 171
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 158
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 159 NKVSDISVLAKLTNLESL 176
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 145 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 199
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 200 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 243
>gi|219821279|gb|ACL37764.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 145 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 202
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 203 NQ-LKDIGTLASLTNLTDLDLANNQIS 228
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 80 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 136
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 137 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 171
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 158
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 159 NKVSDISVLAKLTNLESL 176
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 145 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 199
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 200 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 243
>gi|226223065|ref|YP_002757172.1| Internalin A [Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|386731210|ref|YP_006204706.1| internalin A [Listeria monocytogenes 07PF0776]
gi|406703224|ref|YP_006753578.1| internalin A (LPXTG motif) [Listeria monocytogenes L312]
gi|167861892|gb|ACA05645.1| InlA [Listeria monocytogenes]
gi|167861914|gb|ACA05656.1| InlA [Listeria monocytogenes]
gi|167861978|gb|ACA05688.1| InlA [Listeria monocytogenes]
gi|194239396|emb|CAQ76838.1| internalin A [Listeria monocytogenes]
gi|225875527|emb|CAS04230.1| Internalin A [Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|298359780|gb|ADI77469.1| internalin A [Listeria monocytogenes]
gi|384389968|gb|AFH79038.1| internalin A [Listeria monocytogenes 07PF0776]
gi|406360254|emb|CBY66527.1| internalin A (LPXTG motif) [Listeria monocytogenes L312]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|130774755|gb|ABO32392.1| InlA [Listeria monocytogenes]
gi|130774767|gb|ABO32398.1| InlA [Listeria monocytogenes]
gi|298359732|gb|ADI77445.1| internalin A [Listeria monocytogenes]
gi|298360004|gb|ADI77581.1| internalin A [Listeria monocytogenes]
gi|298360478|gb|ADI77818.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|83629759|gb|ABC26541.1| internalin C2 [Listeria monocytogenes]
Length = 547
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
A+L + L G G+TTI+G+ L NL L+L N L L NLT + L+LSGN
Sbjct: 72 ADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITD--LTPLKNLTKITELELSGN 129
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTI 115
+A L ++KTLDL IT +
Sbjct: 130 PLKNVSAIAGLQSIKTLDLTSTQITDV 156
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 115 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 167
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + GN ++ L LANL L TL D I+ I
Sbjct: 168 LYLDLNQITN--ISPLAGLTNLQYLSI-GNAQVSDLTPLANLSKLTTLKADDNKISDI 222
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 137 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYL 190
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA+LPNL + L++ I+ +
Sbjct: 191 SIGNAQV--SDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDV 244
>gi|371942138|gb|AEX60881.1| internaline [Listeria monocytogenes]
Length = 789
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|357446811|ref|XP_003593681.1| Somatic embryogenesis receptor-like kinase [Medicago truncatula]
gi|355482729|gb|AES63932.1| Somatic embryogenesis receptor-like kinase [Medicago truncatula]
Length = 934
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNLEA 58
+ +L L+ LDLS+N +T G++ R + NL NL L L GCG + + LK L
Sbjct: 85 IQSLSELETLDLSSNTGMT-GTIPR-EIGNLKNLNSLALVGCGFSGPIPDSIGSLKKLTF 142
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
L L+SN + L NL+NL LDL NQ
Sbjct: 143 LALNSNNFTGNIPHSLGNLSNLDWLDLDQNQ 173
>gi|313485048|gb|ADR52999.1| InlA [Listeria monocytogenes]
gi|313485083|gb|ADR53012.1| InlA [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|298360360|gb|ADI77759.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|167862040|gb|ACA05719.1| InlA [Listeria monocytogenes]
gi|194326153|emb|CAQ77235.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|167861888|gb|ACA05643.1| InlA [Listeria monocytogenes]
gi|194326163|emb|CAQ77240.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT + L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|145687807|gb|ABP88876.1| truncated internalin A precursor [Listeria monocytogenes]
Length = 287
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDL 107
NQ L +G LA+L NL LDL
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDL 280
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVT---DLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 64/118 (54%), Gaps = 17/118 (14%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
L NL L L+LS+N I+ S L+ LT+L++L G +T ++ LA L LE LD
Sbjct: 160 LKNLTNLNRLELSSNT-ISDIS----ALSGLTSLQQLSF-GNQVTDLKPLANLTTLERLD 213
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTLGLANLPNLKTLD-----LRDCG 111
+SSN + LA LTNL+ L + NQ ++T LG+ L NL L L+D G
Sbjct: 214 ISSNKV--SDISVLAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQLKDIG 267
>gi|130774791|gb|ABO32410.1| InlA [Listeria monocytogenes]
gi|298360240|gb|ADI77699.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|404412360|ref|YP_006697947.1| internalin C2 [Listeria monocytogenes SLCC7179]
gi|404238059|emb|CBY59460.1| internalin C2 (LPXTG motif) [Listeria monocytogenes SLCC7179]
Length = 548
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 29 ANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGN 88
A+L + L G G+TTI+G+ L NL L+L N L L NLT + L+LSGN
Sbjct: 73 ADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITD--LTPLKNLTKITELELSGN 130
Query: 89 QNLTTLGLANLPNLKTLDLRDCGITTI 115
+A L ++KTLDL IT +
Sbjct: 131 PLKNVSAIAGLQSIKTLDLTSTQITDV 157
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L NL + L+LS N N+++ +A L ++K LDL IT + LA L NL+
Sbjct: 116 LKNLTKITELELSGNPLKNVSA-------IAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 168
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTL-GLANLPNLKTLDLRDCGITTI 115
L L N + + LA LTNLQ L + GN ++ L LANL L TL D I+ I
Sbjct: 169 LYLDLNQITN--ISPLAGLTNLQYLSI-GNAQVSDLTPLANLSKLTTLKADDNKISDI 223
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+A L+ ++ LDL TS +T + LA L+NL+ L LD IT I LA L NL+ L
Sbjct: 138 IAGLQSIKTLDL------TSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYL 191
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTI 115
+ + L LANL+ L L N+ LA+LPNL + L++ I+ +
Sbjct: 192 SIGNAQV--SDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDV 245
>gi|313485077|gb|ADR53009.1| InlA [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|313485052|gb|ADR53000.1| InlA [Listeria monocytogenes]
Length = 771
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|298359896|gb|ADI77527.1| internalin A [Listeria monocytogenes]
Length = 797
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|298359892|gb|ADI77525.1| internalin A [Listeria monocytogenes]
gi|298360422|gb|ADI77790.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|223006796|gb|ACM69355.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|219821309|gb|ACL37784.1| internalin A [Listeria monocytogenes]
gi|219821393|gb|ACL37840.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 145 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 202
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 203 NQ-LKDIGTLASLTNLTDLDLANNQIS 228
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 80 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 136
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 137 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 171
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 158
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 159 NKVSDISVLAKLTNLESL 176
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 145 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 199
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 200 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 243
>gi|219821264|gb|ACL37754.1| internalin A [Listeria monocytogenes]
gi|219821306|gb|ACL37782.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 145 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 202
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 203 NQ-LKDIGTLASLTNLTDLDLANNQIS 228
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 80 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 136
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 137 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 171
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 158
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 159 NKVSDISVLAKLTNLESL 176
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 145 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 199
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 200 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 243
>gi|148607482|gb|ABQ95519.1| InlA [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|148607492|gb|ABQ95522.1| InlA [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|148607488|gb|ABQ95520.1| InlA [Listeria monocytogenes]
Length = 797
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|254825753|ref|ZP_05230754.1| internalin A [Listeria monocytogenes FSL J1-194]
gi|255521302|ref|ZP_05388539.1| internalin A [Listeria monocytogenes FSL J1-175]
gi|130774771|gb|ABO32400.1| InlA [Listeria monocytogenes]
gi|130774777|gb|ABO32403.1| InlA [Listeria monocytogenes]
gi|130774779|gb|ABO32404.1| InlA [Listeria monocytogenes]
gi|150371874|dbj|BAF65726.1| internalin A [Listeria monocytogenes]
gi|150371876|dbj|BAF65727.1| internalin A [Listeria monocytogenes]
gi|223006790|gb|ACM69352.1| internalin A [Listeria monocytogenes]
gi|290350838|dbj|BAI78340.1| internalin A [Listeria monocytogenes]
gi|293594997|gb|EFG02758.1| internalin A [Listeria monocytogenes FSL J1-194]
gi|298359742|gb|ADI77450.1| internalin A [Listeria monocytogenes]
gi|298359744|gb|ADI77451.1| internalin A [Listeria monocytogenes]
gi|298359756|gb|ADI77457.1| internalin A [Listeria monocytogenes]
gi|298359790|gb|ADI77474.1| internalin A [Listeria monocytogenes]
gi|298359872|gb|ADI77515.1| internalin A [Listeria monocytogenes]
gi|298359880|gb|ADI77519.1| internalin A [Listeria monocytogenes]
gi|298359942|gb|ADI77550.1| internalin A [Listeria monocytogenes]
gi|298359946|gb|ADI77552.1| internalin A [Listeria monocytogenes]
gi|298360032|gb|ADI77595.1| internalin A [Listeria monocytogenes]
gi|298360064|gb|ADI77611.1| internalin A [Listeria monocytogenes]
gi|298360114|gb|ADI77636.1| internalin A [Listeria monocytogenes]
gi|298360202|gb|ADI77680.1| internalin A [Listeria monocytogenes]
gi|298360282|gb|ADI77720.1| internalin A [Listeria monocytogenes]
gi|298360284|gb|ADI77721.1| internalin A [Listeria monocytogenes]
gi|298360314|gb|ADI77736.1| internalin A [Listeria monocytogenes]
gi|298360330|gb|ADI77744.1| internalin A [Listeria monocytogenes]
gi|298360346|gb|ADI77752.1| internalin A [Listeria monocytogenes]
gi|298360410|gb|ADI77784.1| internalin A [Listeria monocytogenes]
gi|298360420|gb|ADI77789.1| internalin A [Listeria monocytogenes]
gi|298360440|gb|ADI77799.1| internalin A [Listeria monocytogenes]
gi|298360454|gb|ADI77806.1| internalin A [Listeria monocytogenes]
gi|298360470|gb|ADI77814.1| internalin A [Listeria monocytogenes]
gi|298360494|gb|ADI77826.1| internalin A [Listeria monocytogenes]
gi|298360506|gb|ADI77832.1| internalin A [Listeria monocytogenes]
gi|298360604|gb|ADI77881.1| internalin A [Listeria monocytogenes]
gi|298360610|gb|ADI77884.1| internalin A [Listeria monocytogenes]
gi|298360612|gb|ADI77885.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|85679228|gb|ABC72030.1| InlA [Listeria monocytogenes]
Length = 794
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 202 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 259
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 260 NQ-LKDIGTLASLTNLTDLDLANNQIS 285
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 137 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 193
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 194 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 228
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 159 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 215
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 216 NKVSDISVLAKLTNLESL 233
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 202 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 256
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 257 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 300
>gi|85679224|gb|ABC72028.1| InlA [Listeria monocytogenes]
Length = 794
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 202 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 259
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 260 NQ-LKDIGTLASLTNLTDLDLANNQIS 285
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 137 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 193
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 194 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 228
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 159 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 215
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 216 NKVSDISVLAKLTNLESL 233
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 202 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 256
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 257 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 300
>gi|322952088|gb|ADX21043.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|322952085|gb|ADX21042.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|298360550|gb|ADI77854.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|254568814|ref|XP_002491517.1| Conserved nuclear regulatory subunit of Glc7p type 1 protein
serine-threonine phosphatase (PP1) [Komagataella
pastoris GS115]
gi|238031314|emb|CAY69237.1| Conserved nuclear regulatory subunit of Glc7p type 1 protein
serine-threonine phosphatase (PP1) [Komagataella
pastoris GS115]
gi|328351972|emb|CCA38371.1| hypothetical protein PP7435_Chr2-0685 [Komagataella pastoris CBS
7435]
Length = 360
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 19/130 (14%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
L +L+ L++L +I S LT++ GL L NL++L L GI+ I+ L K LE L
Sbjct: 222 LDSLKNLEIL------SIQSNRLTKIEGLEELVNLRELYLADNGISKIENLDKNTKLEVL 275
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG-----LANLPNLKTLDLRDCGITT 114
DL+SN H LE +++LT+L L S N+ +++ L+ LP L T+ I T
Sbjct: 276 DLTSNKIEH--LENMSHLTSLTDLWFSYNK-ISSFAEVEKELSKLPQLDTVYFEHNPIQT 332
Query: 115 IQGIQQFTSY 124
+ TSY
Sbjct: 333 ----ENPTSY 338
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 22/131 (16%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
++NL+ L+ L+L N LT +G L NL+++ L L I +Q L LKNLE
Sbjct: 177 ISNLKSLETLELGGN------KLTEIGEELLNLSSITDLWLGKNYIQRLQNLDSLKNLEI 230
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN------LKTLDLRDCGI 112
L + SN +EGL L NL+ L L+ N G++ + N L+ LDL I
Sbjct: 231 LSIQSNRL--TKIEGLEELVNLRELYLADN------GISKIENLDKNTKLEVLDLTSNKI 282
Query: 113 TTIQGIQQFTS 123
++ + TS
Sbjct: 283 EHLENMSHLTS 293
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 7 LQVLDLSANYNITSGSLTRLG-----------------LANLTNLKKLDLDGCGITTI-Q 48
L+VLDLS N ++ RL ++NL +L+ L+L G +T I +
Sbjct: 139 LEVLDLSFNKIKNIKNVDRLSKLKKLYLVQNKVHEIKNISNLKSLETLELGGNKLTEIGE 198
Query: 49 GLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLR 108
L L ++ L L NY L+ L +L NL++L + N+ GL L NL+ L L
Sbjct: 199 ELLNLSSITDLWLGKNYI--QRLQNLDSLKNLEILSIQSNRLTKIEGLEELVNLRELYLA 256
Query: 109 DCGITTIQGIQQFT 122
D GI+ I+ + + T
Sbjct: 257 DNGISKIENLDKNT 270
>gi|290892593|ref|ZP_06555586.1| InlD protein [Listeria monocytogenes FSL J2-071]
gi|404406717|ref|YP_006689432.1| internalin D [Listeria monocytogenes SLCC2376]
gi|290557902|gb|EFD91423.1| InlD protein [Listeria monocytogenes FSL J2-071]
gi|404240866|emb|CBY62266.1| internalin D (LPXTG motif) [Listeria monocytogenes SLCC2376]
Length = 568
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G L N+ L L+ ITT+ LA L L L+LS+N + L+N+TNL L L
Sbjct: 92 GAQYLNNIDTLVLNNNKITTLNPLAGLSRLSILELSNNQL--NDISALSNVTNLHQLRLD 149
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
GNQ G++NL NL+T++L + IT I I
Sbjct: 150 GNQIKQLNGVSNLNNLETIELSNNQITDISPI 181
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 10/85 (11%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
LA L L +L+LS N +I++ L+N+TNL +L LDG I + G++ L NLE
Sbjct: 115 LAGLSRLSILELSNNQLNDISA-------LSNVTNLHQLRLDGNQIKQLNGVSNLNNLET 167
Query: 59 LDLSSNYYLH-GSLEGLANLTNLQV 82
++LS+N + GL NL L +
Sbjct: 168 IELSNNQITDISPISGLKNLIGLGI 192
>gi|224060895|ref|XP_002194042.1| PREDICTED: leucine-rich repeat-containing protein 31 [Taeniopygia
guttata]
Length = 581
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 25/114 (21%)
Query: 7 LQVLDLSANYNI-TSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNY 65
L+VLD+S N NI S + L N+ LK+L+L CG+ K +L+ LD +
Sbjct: 261 LEVLDISINKNIGCSMKVIAQDLKNVPGLKELNLHMCGL-------KQDSLQGLDTA--- 310
Query: 66 YLHGSLEGLANLTNLQVLDLSGNQNL------TTLGLANLPNLKTLDLRDCGIT 113
L +LT L+ LD+S N+ + +T LA+L NL+ LDL C +T
Sbjct: 311 --------LQHLTELRKLDISCNREIGGGFKASTAHLASLKNLEVLDLHQCCVT 356
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 31/123 (25%)
Query: 7 LQVLDLSANYNITSG-SLTRLGLANLTNLKKLDLDGCGITTIQG--LAKLKNLEALDLSS 63
L+ LDLS N NI SL L LK L + C +T G LA+L N+
Sbjct: 205 LEELDLSWNSNIGGKLSLLTKKLQEGCKLKCLKITDCNLTAKDGESLAELLNV------- 257
Query: 64 NYYLHGSLEGLANLTNLQVLDLSGNQNL------TTLGLANLPNLKTLDLRDCGIT--TI 115
+ NL+VLD+S N+N+ L N+P LK L+L CG+ ++
Sbjct: 258 -------------IPNLEVLDISINKNIGCSMKVIAQDLKNVPGLKELNLHMCGLKQDSL 304
Query: 116 QGI 118
QG+
Sbjct: 305 QGL 307
>gi|219821372|gb|ACL37826.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 145 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 202
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 203 NQ-LKDIGTLASLTNLTDLDLANNQIS 228
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 80 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 136
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 137 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 171
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 158
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 159 NKVSDISVLAKLTNLESL 176
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 145 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 199
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 200 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 243
>gi|219821273|gb|ACL37760.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 145 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 202
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 203 NQ-LKDIGTLASLTNLTDLDLANNQIS 228
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 80 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 136
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 137 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 171
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 158
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 159 NKVSDISVLAKLTNLESL 176
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 145 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 199
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 200 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 243
>gi|22347546|gb|AAM95918.1| internalin A precursor [Listeria monocytogenes]
gi|22347550|gb|AAM95920.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 147 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 204
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 205 NQ-LKDIGTLASLTNLTDLDLANNQIS 230
Score = 42.0 bits (97), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 82 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 138
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 139 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 173
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 104 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 160
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 161 NKVSDISVLAKLTNLESL 178
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 147 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 201
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 202 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 245
>gi|75761815|ref|ZP_00741747.1| S-layer protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|74490691|gb|EAO53975.1| S-layer protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
Length = 678
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+KL L +T I ++KL++L+ +DL+SN S+ + L N+ +L L
Sbjct: 171 GLEYMTNLEKLTLRESNVTDISAISKLRSLKYVDLTSNSI--ESIHPIGQLENINMLFLR 228
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
N+ L+ + +KTLDL I IQ +
Sbjct: 229 DNKISDLTPLSKMKKIKTLDLIGNNIKDIQPL 260
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+ L L+G G+ I ++ LK L +++S N + L++L NLQ L+L+
Sbjct: 519 GLEYMTNLENLTLEGVGLKNIDFISNLKRLNNVNVSHNQI--EDITPLSSLKNLQWLNLT 576
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
N+ L ++ +L +L L + I ++ + Q +
Sbjct: 577 ENRITDVTVLGSMLDLLSLKLAENEIRDVRPLIQLGQW 614
>gi|423480628|ref|ZP_17457318.1| hypothetical protein IEQ_00406, partial [Bacillus cereus BAG6X1-2]
gi|401147278|gb|EJQ54784.1| hypothetical protein IEQ_00406, partial [Bacillus cereus BAG6X1-2]
Length = 901
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+++L ++ L+ +I + ++T L ++ + +L KL + IT I LAK+KNL++L
Sbjct: 340 ISDLTGMEQLNKVKELSIGNNNITNLESISRMESLTKLAVSDAEITDITPLAKMKNLQSL 399
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
DL NY + L+ LTNL L+LS N+
Sbjct: 400 DLEENYI--SDVSSLSGLTNLYELNLSSNE 427
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 21/134 (15%)
Query: 1 LANLRYLQVLDLSANY--NITSGS----LTRLGLAN-----------LTNLKKLDLDGCG 43
++NLR L+ + L+ N NI S L +L ++N + +LKKL
Sbjct: 605 ISNLRSLKSVSLAHNQIENIEPFSKLEKLEKLNISNNDVENIEPLFKVNSLKKLTASNNK 664
Query: 44 IT--TIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPN 101
I TIQG+ +LKNL L L+ N S+E ++ ++ L L+L GNQ + L+ L N
Sbjct: 665 INNDTIQGIQQLKNLSVLILNDNEI--SSVEAISEISMLNELELIGNQVVDIEPLSKLIN 722
Query: 102 LKTLDLRDCGITTI 115
L+ L+L D I I
Sbjct: 723 LQWLNLSDNRIKDI 736
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 29 ANLTNLKKLDLD-GCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
A+ +K+L++ G GI + GL + NLE L + L +ANL NL+ LDL
Sbjct: 214 ADALQIKELEVYVGKGINNLAGLEHMVNLEKFRLHESEV--SDLSPIANLNNLKFLDLYS 271
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
NQ +A L +K L LRD IT ++ + +
Sbjct: 272 NQIENIEPIAGLNKIKNLSLRDNQITDLKPLSKL 305
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
+ANL NLK LDL I I+ +A L ++ L L N L+ L+ L ++VLDL G
Sbjct: 258 IANLNNLKFLDLYSNQIENIEPIAGLNKIKNLSLRDNQIT--DLKPLSKLNKVRVLDLIG 315
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
N+ L + +L L + + I+ + G++Q
Sbjct: 316 NKIEDITPLFTMASLGNLYVANNNISDLTGMEQL 349
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 14 ANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEG 73
AN NI+ + G+ L +K+L + IT ++ ++++++L L +S +
Sbjct: 336 ANNNISDLT----GMEQLNKVKELSIGNNNITNLESISRMESLTKLAVSDAEIT--DITP 389
Query: 74 LANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQF 121
LA + NLQ LDL N L+ L NL L+L I+ ++ IQ+F
Sbjct: 390 LAKMKNLQSLDLEENYISDVSSLSGLTNLYELNLSSNEISDVRPIQEF 437
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
++NL +LK + L I I+ +KL+ LE L++S+N ++E L + +L+ L S
Sbjct: 605 ISNLRSLKSVSLAHNQIENIEPFSKLEKLEKLNISNNDV--ENIEPLFKVNSLKKLTASN 662
Query: 88 NQ--NLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
N+ N T G+ L NL L L D I++++ I + +
Sbjct: 663 NKINNDTIQGIQQLKNLSVLILNDNEISSVEAISEIS 699
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL ++ NL+K L ++ + +A L NL+ LDL SN ++E +A L ++ L L
Sbjct: 235 GLEHMVNLEKFRLHESEVSDLSPIANLNNLKFLDLYSNQI--ENIEPIAGLNKIKNLSLR 292
Query: 87 GNQNLTTLGLANLPNLKTLDL 107
NQ L+ L ++ LDL
Sbjct: 293 DNQITDLKPLSKLNKVRVLDL 313
>gi|371942132|gb|AEX60878.1| internaline [Listeria monocytogenes]
Length = 790
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|219821354|gb|ACL37814.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 145 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 202
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 203 NQ-LKDIGTLASLTNLTDLDLANNQIS 228
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 80 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 136
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 137 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 171
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 65/125 (52%), Gaps = 10/125 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 145 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 199
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLKTLDLRDCGITTIQG 117
L+ N + LA+LTNL LDL+ NQ NL L GL L LK + I+ I G
Sbjct: 200 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPIAG 257
Query: 118 IQQFT 122
+ T
Sbjct: 258 LTALT 262
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 158
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 159 NKVSDISVLAKLTNLESL 176
>gi|423578883|ref|ZP_17554994.1| hypothetical protein IIA_00398, partial [Bacillus cereus VD014]
gi|401219577|gb|EJR26231.1| hypothetical protein IIA_00398, partial [Bacillus cereus VD014]
Length = 845
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+KL L +T I ++KL++L+ +DL+SN S+ + L N+ +L L
Sbjct: 235 GLEYMTNLEKLTLRESNVTDISAISKLRSLKYVDLTSNSI--ESIHPIGQLENINMLFLR 292
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
N+ L+ + +KTLDL I IQ +
Sbjct: 293 DNKISDLTPLSKMKKIKTLDLIGNNIKDIQPL 324
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 10/74 (13%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLE---GLANLTNLQVL 83
GL +TNL+KL ++G G+ I+ ++ LK L +++S H +E L+ L NLQ L
Sbjct: 583 GLEYMTNLEKLTIEGVGLKNIEFISNLKQLTDVNVS-----HNQIEDTTPLSLLKNLQWL 637
Query: 84 DLSGN--QNLTTLG 95
+L+ N +++T LG
Sbjct: 638 NLTDNRIKDVTVLG 651
>gi|371942084|gb|AEX60854.1| internaline [Listeria monocytogenes]
Length = 790
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|356566696|ref|XP_003551566.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
FLS2-like [Glycine max]
Length = 1188
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGIT--TIQGLAKLKNLEA 58
L L+YL ++ L N N +S AN TNL L L C +T + + ++ L
Sbjct: 286 LTRLQYLSIIRLDLN-NFSSP--VPETFANFTNLTTLHLSSCELTGTFPEKIFQVATLSV 342
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSG-NQNLTTLGLANLPNLKTLDLRDC 110
+DLS NY+L+GSL + LQ L +SG N + + NL L LDL +C
Sbjct: 343 VDLSFNYHLYGSLPEFPLNSPLQTLIVSGTNFSGGIPPINNLGQLSILDLSNC 395
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 28 LANLTNLKKLDLDGCGITTI-----QGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQV 82
+ NLT L++L +DG +TT+ L KL NL+ L + SN L G L+ +LT LQ
Sbjct: 235 VHNLTMLRQLYMDGVIVTTLGNKWSNALFKLVNLQELSM-SNCNLSGPLD--PSLTRLQY 291
Query: 83 -----LDLSGNQNLTTLGLANLPNLKTLDLRDCGIT 113
LDL+ + AN NL TL L C +T
Sbjct: 292 LSIIRLDLNNFSSPVPETFANFTNLTTLHLSSCELT 327
>gi|322952090|gb|ADX21044.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|313485054|gb|ADR53001.1| InlA [Listeria monocytogenes]
Length = 771
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|290892407|ref|ZP_06555401.1| InlA protein [Listeria monocytogenes FSL J2-071]
gi|290557973|gb|EFD91493.1| InlA protein [Listeria monocytogenes FSL J2-071]
Length = 796
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 206 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 263
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 264 NQ-LKDIGTLASLTNLTDLDLANNQIS 289
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 141 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 197
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 198 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 232
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 163 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 219
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 220 NKVSDISVLAKLTNLESL 237
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 206 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 260
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 261 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 304
>gi|219821360|gb|ACL37818.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 145 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 202
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 203 NQ-LKDIGTLASLTNLTDLDLANNQIS 228
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 80 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 136
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 137 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 171
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 158
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 159 NKVSDISVLAKLTNLESL 176
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 145 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 199
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 200 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 243
>gi|219821312|gb|ACL37786.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 145 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 202
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 203 NQ-LKDIGTLASLTNLTDLDLANNQIS 228
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 80 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 136
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 137 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 171
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 158
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 159 NKVSDISVLAKLTNLESL 176
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 145 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 199
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 200 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 243
>gi|168035738|ref|XP_001770366.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678397|gb|EDQ64856.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 643
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 69/129 (53%), Gaps = 9/129 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG--ITTIQGLAKLKNLEA 58
+ NL + LDLS ++TS L + LANL++L +L+GC I + + L +L
Sbjct: 495 IINLSSMTKLDLSGYSSLTS--LPK-ELANLSSLNLFNLNGCSNLIILLHEIKNLSSLTK 551
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCG--ITT 114
LDLS L L + NL+ L+ L LS N T+L ++NL +LK L+L+ C I+
Sbjct: 552 LDLSGCLSLASLLYEITNLSYLKWLKLSRYSNFTSLSHEISNLSSLKWLNLKRCSSFISL 611
Query: 115 IQGIQQFTS 123
+ I +S
Sbjct: 612 LHKIANLSS 620
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITT--IQGLAKLKNLEA 58
+ NL L++++LS ++TS +ANL++L KLDL C I T +A L +L
Sbjct: 351 ITNLSSLRIVNLSDCSHLTS---LPNEIANLSSLTKLDLTNCSILTSLPHEIANLSSLTK 407
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCG 111
LDL L + NL +L LDL G +LT+L +A +L DLR C
Sbjct: 408 LDLRGCSSLTSLSHEITNLFSLIKLDLRGCSSLTSLPHEIAKFSSLTKFDLRTCS 462
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 28 LANLTNLKKLDLDGCG-ITTIQG-LAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDL 85
+ NL++L+ ++L C +T++ +A L +L LDL++ L +ANL++L LDL
Sbjct: 351 ITNLSSLRIVNLSDCSHLTSLPNEIANLSSLTKLDLTNCSILTSLPHEIANLSSLTKLDL 410
Query: 86 SGNQNLTTLG--LANLPNLKTLDLRDCGITT--IQGIQQFTS 123
G +LT+L + NL +L LDLR C T I +F+S
Sbjct: 411 RGCSSLTSLSHEITNLFSLIKLDLRGCSSLTSLPHEIAKFSS 452
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCG--ITTIQGLAKLKNLEA 58
+ NL YL+ L LS N TS S ++NL++LK L+L C I+ + +A L +L+
Sbjct: 567 ITNLSYLKWLKLSRYSNFTSLSH---EISNLSSLKWLNLKRCSSFISLLHKIANLSSLKI 623
Query: 59 LDLSSNYYLHGSLEGLANLT 78
LDLS L L+ LAN +
Sbjct: 624 LDLSRCSSLKNLLKELANFS 643
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 16 YNITSGSLTRLG--LANLTNLKKLDLDGCGITT--IQGLAKLKNLEALDLSSNYYLHGSL 71
Y + SLT L LANL++L KL+L GC T LA L +L LDLS L
Sbjct: 169 YFMNWSSLTSLPKELANLSSLTKLNLTGCSSLTNMPHELANLSSLTILDLSECLRLTSLP 228
Query: 72 EGLANLTNLQVLDLSGNQNLTTLG 95
+ NL++L +LDL+ +LT L
Sbjct: 229 YEITNLSSLIILDLNNCSSLTNLS 252
>gi|85679281|gb|ABC72056.1| InlD [Listeria monocytogenes]
Length = 567
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
G L N+ L L+ ITT+ LA L L L+LS+N + L+N+TNL L L
Sbjct: 91 GAQYLNNIDTLVLNNNKITTLNPLAGLSRLSILELSNNQL--NDISALSNVTNLHQLRLD 148
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
GNQ G++NL NL+T++L + IT I I
Sbjct: 149 GNQIKQLNGVSNLNNLETIELSNNQITDISPI 180
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 10/85 (11%)
Query: 1 LANLRYLQVLDLSANY--NITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
LA L L +L+LS N +I++ L+N+TNL +L LDG I + G++ L NLE
Sbjct: 114 LAGLSRLSILELSNNQLNDISA-------LSNVTNLHQLRLDGNQIKQLNGVSNLNNLET 166
Query: 59 LDLSSNYYLH-GSLEGLANLTNLQV 82
++LS+N + GL NL L +
Sbjct: 167 IELSNNQITDISPISGLKNLIGLGI 191
>gi|423467598|ref|ZP_17444366.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG6O-1]
gi|423536999|ref|ZP_17513417.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB2-9]
gi|402413536|gb|EJV45879.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG6O-1]
gi|402460581|gb|EJV92302.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB2-9]
Length = 877
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL ++TNL+KL L +T I ++KL++L+ +DL+SN ++ + L N+ +L L
Sbjct: 236 GLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPI--KNIHPIEQLENINMLFLR 293
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQ 116
N+ L+ + +KTLDL I IQ
Sbjct: 294 DNKISDLTPLSKMKKIKTLDLVGNNIEDIQ 323
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+ L L+G G+ I+ ++ LK L +++S N + L++L NLQ L+L+
Sbjct: 584 GLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSHNQI--EDITPLSSLKNLQWLNLA 641
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTSY 124
N + ++ +L +L+L I ++ + Q +
Sbjct: 642 DNHIKDVTVIGSMLDLLSLNLAGNEICDVRPLIQLGQW 679
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
++ ++NL +L++ I I L+KL L+ L+L NY + L+NLT+L ++L
Sbjct: 369 ISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYI--SDISPLSNLTDLHEMNLGA 426
Query: 88 NQ 89
N+
Sbjct: 427 NE 428
>gi|335032003|ref|ZP_08525415.1| leucine rich repeat protein [Streptococcus anginosus SK52 = DSM
20563]
gi|333768143|gb|EGL45346.1| leucine rich repeat protein [Streptococcus anginosus SK52 = DSM
20563]
Length = 327
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 13/86 (15%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L N NLK + G I I+ LA+LKNLE+L+L N + L+NL+NLQ + L
Sbjct: 184 LKNYPNLKTVAAAGNNIRDIRPLAQLKNLESLNLDYNEI--SDISALSNLSNLQAVSLEH 241
Query: 88 NQ-----------NLTTLGLANLPNL 102
NQ +LT L L+N PNL
Sbjct: 242 NQLQDVSALAQKVHLTRLFLSNNPNL 267
>gi|284800720|ref|YP_003412585.1| Internalin A [Listeria monocytogenes 08-5578]
gi|284993906|ref|YP_003415674.1| Internalin A [Listeria monocytogenes 08-5923]
gi|130774827|gb|ABO32426.1| InlA [Listeria monocytogenes]
gi|167862038|gb|ACA05718.1| InlA [Listeria monocytogenes]
gi|194326145|emb|CAQ77231.1| internalin A [Listeria monocytogenes]
gi|194326165|emb|CAQ77241.1| internalin A [Listeria monocytogenes]
gi|284056282|gb|ADB67223.1| Internalin A [Listeria monocytogenes 08-5578]
gi|284059373|gb|ADB70312.1| Internalin A [Listeria monocytogenes 08-5923]
gi|298359730|gb|ADI77444.1| internalin A [Listeria monocytogenes]
gi|298359786|gb|ADI77472.1| internalin A [Listeria monocytogenes]
gi|298359904|gb|ADI77531.1| internalin A [Listeria monocytogenes]
gi|298359978|gb|ADI77568.1| internalin A [Listeria monocytogenes]
gi|298360068|gb|ADI77613.1| internalin A [Listeria monocytogenes]
gi|298360228|gb|ADI77693.1| internalin A [Listeria monocytogenes]
gi|298360452|gb|ADI77805.1| internalin A [Listeria monocytogenes]
gi|298360556|gb|ADI77857.1| internalin A [Listeria monocytogenes]
gi|298360576|gb|ADI77867.1| internalin A [Listeria monocytogenes]
gi|298360600|gb|ADI77879.1| internalin A [Listeria monocytogenes]
gi|298360678|gb|ADI77918.1| internalin A [Listeria monocytogenes]
gi|443428872|gb|AGC92235.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|85679234|gb|ABC72033.1| InlA [Listeria monocytogenes]
Length = 794
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 202 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 259
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 260 NQ-LKDIGTLASLTNLTDLDLANNQIS 285
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 137 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 193
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 194 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 228
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 159 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 215
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 216 NKVSDISVLAKLTNLESL 233
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 202 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 256
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 257 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 300
>gi|402562421|ref|YP_006605145.1| internalin protein [Bacillus thuringiensis HD-771]
gi|401791073|gb|AFQ17112.1| internalin protein [Bacillus thuringiensis HD-771]
Length = 1009
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+KL L +T I ++KL++L+ +DL+SN S+ + L N+ +L L
Sbjct: 235 GLEYMTNLEKLTLRESNVTDISAISKLRSLKYVDLTSNSI--ESIHPIGQLENINMLFLR 292
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
N+ L+ + +KTLDL I IQ +
Sbjct: 293 DNKISDLTPLSKMKKIKTLDLIGNNIKDIQPL 324
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL +TNL+ L L+G G+ I ++ LK L +++S N + L++L NLQ L+L+
Sbjct: 583 GLEYMTNLENLTLEGVGLKNIDFISNLKRLNNVNVSHNQI--EDITPLSSLKNLQWLNLT 640
Query: 87 GNQ--NLTTLG 95
N+ ++T LG
Sbjct: 641 ENRITDVTVLG 651
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
++ ++NL +L++ I I L++L NL+ L+L NY + L+ LTNL ++L
Sbjct: 367 SISKMSNLIELEIADSEIKDISPLSQLGNLQVLNLEENYI--SDISPLSTLTNLHEINLG 424
Query: 87 GNQ 89
N+
Sbjct: 425 ANE 427
>gi|422808467|ref|ZP_16856878.1| Internalin-like protein [Listeria monocytogenes FSL J1-208]
gi|378753501|gb|EHY64085.1| Internalin-like protein [Listeria monocytogenes FSL J1-208]
Length = 607
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
+++L L+ L + NI LT L GL +LT L L IT +Q L+ L NL L
Sbjct: 193 VSDLNALKALHQLISLNIGQNKLTNLNGLQDLTRLTTLFAKENQITNVQPLSGLINLSTL 252
Query: 60 DLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
+LS+N ++ LA LTNLQ L L NQ GLA+L NL L++ I+ I+ +
Sbjct: 253 ELSTNQITD--IQPLAGLTNLQTLYLLNNQISDVTGLASLTNLDWLNINKNKISNIRPL 309
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 23/120 (19%)
Query: 19 TSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH---------- 68
TS ++T+ L ++T L D G +++++G+ L NL S+N
Sbjct: 61 TSDTVTQTELNSITTL---DASGKSVSSLEGMNYLSNLSYFSFSNNQVSDLSPLTNLTSL 117
Query: 69 ----------GSLEGLANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
++ LANL+NL++L LSGN LANL L LD+ D ++ IQ +
Sbjct: 118 TTLALYDNQVSAIAPLANLSNLKLLQLSGNPISDLQPLANLKELTALDVNDANVSNIQPL 177
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 63/139 (45%), Gaps = 27/139 (19%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEAL 59
LANL L++L LS N ++ L LANL L LD++ ++ IQ L L L AL
Sbjct: 133 LANLSNLKLLQLSGN------PISDLQPLANLKELTALDVNDANVSNIQPLTGLTKLVAL 186
Query: 60 DLSSNYY--------LHG------------SLEGLANLTNLQVLDLSGNQNLTTLGLANL 99
LS+N LH +L GL +LT L L NQ L+ L
Sbjct: 187 GLSNNQVSDLNALKALHQLISLNIGQNKLTNLNGLQDLTRLTTLFAKENQITNVQPLSGL 246
Query: 100 PNLKTLDLRDCGITTIQGI 118
NL TL+L IT IQ +
Sbjct: 247 INLSTLELSTNQITDIQPL 265
>gi|396479184|ref|XP_003840694.1| hypothetical protein LEMA_P103460.1 [Leptosphaeria maculans JN3]
gi|312217267|emb|CBX97215.1| hypothetical protein LEMA_P103460.1 [Leptosphaeria maculans JN3]
Length = 474
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 27 GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLS 86
GL LT L++L L IT I+GL L NL+ L + SN SL GL++LT+L+ L +S
Sbjct: 294 GLETLTGLEELWLGKNKITEIKGLDTLSNLKILSIQSNRLR--SLSGLSHLTSLEELHVS 351
Query: 87 GNQNLTTLGLANLPNLKTLDLRDCGITTIQGI 118
N + GL++ NL+ +D+ I + G+
Sbjct: 352 HNLLTSLSGLSSNANLRVIDISANPIEHLAGL 383
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L LTNL++++L + I+GL L LE L L N ++GL L+NL++L +
Sbjct: 273 LEGLTNLRQIELGANRVREIEGLETLTGLEELWLGKNKITE--IKGLDTLSNLKILSIQS 330
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ + GL++L +L+ L
Sbjct: 331 NRLRSLSGLSHLTSLEEL 348
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 30 NLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQ 89
+LT L+ L I I+ L L NL ++L +N +EGL LT L+ L L N+
Sbjct: 253 HLTKLRDLYFVQNKIGKIENLEGLTNLRQIELGANRVRE--IEGLETLTGLEELWLGKNK 310
Query: 90 NLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
GL L NLK L ++ + ++ G+ TS
Sbjct: 311 ITEIKGLDTLSNLKILSIQSNRLRSLSGLSHLTS 344
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 20/110 (18%)
Query: 34 LKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLH--------------------GSLEG 73
L ++DL I+ I+ L NL +LDLS N H G +E
Sbjct: 213 LTEIDLYDNLISHIKNLEPFTNLTSLDLSFNKIKHIKRINHLTKLRDLYFVQNKIGKIEN 272
Query: 74 LANLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
L LTNL+ ++L N+ GL L L+ L L IT I+G+ ++
Sbjct: 273 LEGLTNLRQIELGANRVREIEGLETLTGLEELWLGKNKITEIKGLDTLSN 322
>gi|223698613|gb|ACN18982.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 118 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 175
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 176 NQ-LKDIGTLASLTNLTDLDLANNQIS 201
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ L +LQ L G
Sbjct: 53 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLISLQQLSF-G 109
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 110 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 144
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 118 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 172
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 173 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 216
>gi|219821375|gb|ACL37828.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 145 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 202
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 203 NQ-LKDIGTLASLTNLTDLDLANNQIS 228
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 80 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 136
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 137 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 171
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 158
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 159 NKVSDISVLAKLTNLESL 176
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 145 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 199
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 200 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 243
>gi|219821369|gb|ACL37824.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 145 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 202
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 203 NQ-LKDIGTLASLTNLTDLDLANNQIS 228
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 80 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 136
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 137 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 171
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 158
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 159 NKVSDISVLAKLTNLESL 176
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 145 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 199
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 200 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 243
>gi|219821294|gb|ACL37774.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 145 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 202
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 203 NQ-LKDIGTLASLTNLTDLDLANNQIS 228
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 80 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 136
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 137 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 171
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 158
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 159 NKVSDISVLAKLTNLESL 176
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 145 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 199
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 200 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 243
>gi|209877290|ref|XP_002140087.1| protein phosphatase 1 regulatory subunit 7 [Cryptosporidium muris
RN66]
gi|209555693|gb|EEA05738.1| protein phosphatase 1 regulatory subunit 7, putative
[Cryptosporidium muris RN66]
Length = 327
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 17 NITSGSLTRL-GLANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLA 75
NI G + ++ L NLK L L I I+ L +LK+L L+L N +E L
Sbjct: 36 NIQCGRIGKIENLYKCKNLKALILISNHIEKIENLNELKSLNILELYQNSI--RKIEDLD 93
Query: 76 NLTNLQVLDLSGNQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFTS 123
L NL+VLDLS N+ L NL NL+ L L I+ I+G+ T
Sbjct: 94 ELINLEVLDLSFNKIRKVENLGNLRNLRKLFLSSNRISIIEGLNSNTK 141
>gi|22347544|gb|AAM95917.1| internalin A precursor [Listeria monocytogenes]
Length = 741
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 147 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 204
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 205 NQ-LKDIGTLASLTNLTDLDLANNQIS 230
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 82 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 138
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 139 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 173
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 104 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 160
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 161 NKVSDISVLAKLTNLESL 178
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 147 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 201
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 202 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 245
>gi|85679230|gb|ABC72031.1| InlA [Listeria monocytogenes]
Length = 794
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 202 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 259
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 260 NQ-LKDIGTLASLTNLTDLDLANNQIS 285
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 137 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 193
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 194 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 228
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 159 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 215
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 216 NKVSDISVLAKLTNLESL 233
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 202 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 256
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 257 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 300
>gi|355559884|gb|EHH16612.1| hypothetical protein EGK_11919 [Macaca mulatta]
Length = 552
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 27/121 (22%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRL--GLANLTNLKKLDLDGCGITTIQGLAKLKNLEA 58
L L+ L+VLDLS N +I GSL + GL + +NLK L L CG++ K+++
Sbjct: 222 LPTLQSLEVLDLSINRDI-GGSLNSIAQGLKSTSNLKVLKLHSCGLSQ-------KSVKI 273
Query: 59 LDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNL------TTLGLANLPNLKTLDLRDCGI 112
LD + Y L L+ LDLS N++L ++ L L +L+ LDL C +
Sbjct: 274 LDAAFRY-----------LAELRKLDLSCNKDLGGGFEDSSAQLVMLKHLQVLDLHQCSL 322
Query: 113 T 113
T
Sbjct: 323 T 323
>gi|112959508|gb|ABI27281.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 140 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 197
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 198 NQ-LKDIGTLASLTNLTDLDLANNQIS 223
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 75 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 131
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 132 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 166
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 97 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 153
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 154 NKVSDISVLAKLTNLESL 171
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 140 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 194
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 195 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 238
>gi|422808574|ref|ZP_16856985.1| Internalin A [Listeria monocytogenes FSL J1-208]
gi|378752188|gb|EHY62773.1| Internalin A [Listeria monocytogenes FSL J1-208]
Length = 802
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|322952083|gb|ADX21041.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|313485065|gb|ADR53005.1| InlA [Listeria monocytogenes]
Length = 801
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 138 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|313485044|gb|ADR52997.1| InlA [Listeria monocytogenes]
Length = 771
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 203 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 260
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 261 NQ-LKDIGTLASLTNLTDLDLANNQIS 286
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 138 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 194
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 195 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 160 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 216
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 217 NKVSDISVLAKLTNLESL 234
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 203 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 257
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 258 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
>gi|219821267|gb|ACL37756.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 145 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 202
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 203 NQ-LKDIGTLASLTNLTDLDLANNQIS 228
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANL+NL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 80 LANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 136
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 137 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 171
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 102 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 158
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 159 NKVSDISVLAKLTNLESL 176
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 145 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 199
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 200 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 243
>gi|168010570|ref|XP_001757977.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690854|gb|EDQ77219.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 294
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 63/117 (53%), Gaps = 10/117 (8%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLG--LANLTNLKKLDLDGCG--ITTIQGLAKLKNL 56
L NL L++L+LS S LT L LANL++LK+LDL C I +A L +L
Sbjct: 86 LENLSSLKILNLSH----CSSFLTSLPNDLANLSSLKRLDLSHCSSLICLPNDMANLSSL 141
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLPNLKTLDLRDCG 111
+ L+LS L +ANL++L LDLSG +L +L L NL +L L L C
Sbjct: 142 KKLNLSGCLSLICLPNDMANLSSLIKLDLSGCLSLNSLPNILKNLSSLTKLSLNSCS 198
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 64/131 (48%), Gaps = 20/131 (15%)
Query: 1 LANLRYLQVLDLSANYNITS--------GSLTRLGL--------ANLTNLKKLDLDGCG- 43
+ANL L LDLS ++ S SLT+L L A L++L L L C
Sbjct: 159 MANLSSLIKLDLSGCLSLNSLPNILKNLSSLTKLSLNSCSSYDLAILSSLTTLSLICCSS 218
Query: 44 -ITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQNLTTLG--LANLP 100
I+ LA L +L LDLS L L NL++L+ LDLSG +LT+L L NL
Sbjct: 219 LISLPNELANLSSLIRLDLSGCLSLTSLPNELTNLSSLKRLDLSGCSSLTSLPNELKNLS 278
Query: 101 NLKTLDLRDCG 111
+L+ L L C
Sbjct: 279 SLRRLTLSCCS 289
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 67/118 (56%), Gaps = 12/118 (10%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLA-KLKNL--- 56
+ANL L+ L L N+ + SL L +++LK+L L C ++++ L +LKNL
Sbjct: 14 MANLSSLRSLHL--NWCTSLLSLPN-DLRKISSLKELYLVDC--SSLKSLPNELKNLSSL 68
Query: 57 EALDLSSNYYLHGSLEGLANLTNLQVLDLSGNQN-LTTLG--LANLPNLKTLDLRDCG 111
E LDLS L L NL++L++L+LS + LT+L LANL +LK LDL C
Sbjct: 69 ERLDLSHCSSLTSLPNELENLSSLKILNLSHCSSFLTSLPNDLANLSSLKRLDLSHCS 126
>gi|112961622|gb|ABI28434.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 154 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 211
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 212 NQ-LKDIGTLASLTNLTDLDLANNQIS 237
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 89 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 145
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 146 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 180
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 111 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 167
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 168 NKVSDISVLAKLTNLESL 185
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 154 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 208
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 209 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 252
>gi|112961790|gb|ABI28546.1| internalin A [Listeria monocytogenes]
Length = 693
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 99 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 156
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 157 NQ-LKDIGTLASLTNLTDLDLANNQIS 182
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LT+LQ L G
Sbjct: 34 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSF-G 90
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 91 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 125
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L +L+ L + L+ LANLT L+ LD+S
Sbjct: 56 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISS 112
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 113 NKVSDISVLAKLTNLESL 130
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 99 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 153
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 154 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 197
>gi|112959468|gb|ABI27261.1| internalin A [Listeria monocytogenes]
Length = 730
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLT L++LD+ ++ I LAKL NLE+L ++N + L LTNL L L+G
Sbjct: 133 LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI--SDITPLGILTNLDELSLNG 190
Query: 88 NQNLTTLG-LANLPNLKTLDLRDCGIT 113
NQ L +G LA+L NL LDL + I+
Sbjct: 191 NQ-LKDIGTLASLTNLTDLDLANNQIS 216
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
LANLTNL L L IT I L L NL L+LSSN + L+ LTNLQ L G
Sbjct: 68 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTI--SDISALSGLTNLQQLSF-G 124
Query: 88 NQNLTTLGLANLPNLKTLDLRDCGITTIQGIQQFT 122
NQ LANL L+ LD+ ++ I + + T
Sbjct: 125 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 159
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 28 LANLTNLKKLDLDGCGITTIQGLAKLKNLEALDLSSNYYLHGSLEGLANLTNLQVLDLSG 87
L NLTNL +L+L I+ I L+ L NL+ L + L+ LANLT L+ LD+S
Sbjct: 90 LKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQV---TDLKPLANLTTLERLDISS 146
Query: 88 NQNLTTLGLANLPNLKTL 105
N+ LA L NL++L
Sbjct: 147 NKVSDISVLAKLTNLESL 164
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 LANLRYLQVLDLSANYNITSGSLTRLGLANLTNLKKLDLDGCGITTIQGLAKLKNLEALD 60
LANL L+ LD+S+N ++ S+ LA LTNL+ L I+ I L L NL+ L
Sbjct: 133 LANLTTLERLDISSN-KVSDISV----LAKLTNLESLIATNNQISDITPLGILTNLDELS 187
Query: 61 LSSNYYLHGSLEGLANLTNLQVLDLSGNQ--NLTTL-GLANLPNLK 103
L+ N + LA+LTNL LDL+ NQ NL L GL L LK
Sbjct: 188 LNGNQL--KDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 231
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.136 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,644,325,971
Number of Sequences: 23463169
Number of extensions: 56149293
Number of successful extensions: 307997
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2766
Number of HSP's successfully gapped in prelim test: 17641
Number of HSP's that attempted gapping in prelim test: 227372
Number of HSP's gapped (non-prelim): 73450
length of query: 124
length of database: 8,064,228,071
effective HSP length: 90
effective length of query: 34
effective length of database: 5,952,542,861
effective search space: 202386457274
effective search space used: 202386457274
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)