BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048170
(142 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 100 bits (248), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
Y+AP+ + S Y T D+W+VGCIFAEMV+G PLFP + D L I R+ G P + W
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNW 225
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
P + + + EP GL+ SG++LLS+ML LDP+ R+TA AL
Sbjct: 226 PNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 100 bits (248), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
Y+AP+ + S Y T D+W+VGCIFAEMV+G PLFP + D L I R+ G P + W
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNW 225
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
P + + + EP GL+ SG++LLS+ML LDP+ R+TA AL
Sbjct: 226 PNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 100 bits (248), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
Y+AP+ + S Y T D+W+VGCIFAEMV+G PLFP + D L I R+ G P + W
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNW 225
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
P + + + EP GL+ SG++LLS+ML LDP+ R+TA AL
Sbjct: 226 PNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 89.4 bits (220), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 169 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 89.0 bits (219), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 235
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 236 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 290
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 228 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 228 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 228 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 228 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 228 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 229
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 230 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 232 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 230
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 231 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 229
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 230 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 229
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 230 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 235
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 236 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 290
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 232 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 232 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 228 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 229
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 230 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 232 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 229
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 230 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 232 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 232 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 230
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 231 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 230
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 231 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 230
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 231 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 232
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 233 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 287
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W++GCIFAEMV+ + LFP + D L I R G P + W
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 232
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
PG + + S P+ D ++ L+ G LLSQML DP+ R++A AL
Sbjct: 233 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 287
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 87.0 bits (214), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
Y+AP+ + S Y T D+W++GCIFAEM++GKPLFP D L I + G P W
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREW 244
Query: 65 PGANYISELLHSLPQC-EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
P + Q E + G G++LLS MLC DP+ R++A DA+
Sbjct: 245 PQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAM 299
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 87.0 bits (214), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
Y+AP+ + S Y T D+W++GCIFAEM++GKPLFP D L I + G P W
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREW 244
Query: 65 PGANYISELLHSLPQC-EPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
P + Q E + G G++LLS MLC DP+ R++A DA+
Sbjct: 245 PQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAM 299
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 2/115 (1%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETW 64
Y+ P+ + S+ Y T D+W VGCIF EM +G+PLFP ++ L I R+ G PT+ETW
Sbjct: 166 YRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETW 225
Query: 65 PGANYISEL-LHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
PG E ++ P+ L L+ G +LL+++L + +R++A DA+
Sbjct: 226 PGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAM 280
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 80.5 bits (197), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 63/121 (52%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 188 YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 80.5 bits (197), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 6/119 (5%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
Y+AP+ + S Y T D+W+ GCI AEM++GKPLFP ++ L LI + G P + W
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLW 233
Query: 65 PGANYISELLHSLPQCEPADLAE--KTHGLEP---SGVELLSQMLCLDPDHRVTANDAL 118
P + + ++ Q P DL + + H EP + ++ L +L L+PD R++A AL
Sbjct: 234 PSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQAL 292
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 79.0 bits (193), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 253
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 254 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 119 C 119
Sbjct: 310 A 310
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 79.0 bits (193), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 252
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 253 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 119 C 119
Sbjct: 309 A 309
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 79.0 bits (193), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 79.0 bits (193), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 252
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 253 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 119 C 119
Sbjct: 309 A 309
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 79.0 bits (193), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 270
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 271 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 326
Query: 119 C 119
Sbjct: 327 A 327
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 79.0 bits (193), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 79.0 bits (193), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 79.0 bits (193), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 255 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 119 C 119
Sbjct: 311 A 311
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 255 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 119 C 119
Sbjct: 311 A 311
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 252
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 253 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 119 C 119
Sbjct: 309 A 309
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 253
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 254 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 119 C 119
Sbjct: 310 A 310
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 258
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 259 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 314
Query: 119 C 119
Sbjct: 315 A 315
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 249
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 250 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 119 C 119
Sbjct: 306 A 306
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 255 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 119 C 119
Sbjct: 311 A 311
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 243
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 244 KKISSESARNYI----QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
Query: 119 C 119
Sbjct: 300 A 300
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 248 KKISSESARNYI----QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 249
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 250 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 119 C 119
Sbjct: 306 A 306
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 255 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 119 C 119
Sbjct: 311 A 311
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 258
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 259 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 314
Query: 119 C 119
Sbjct: 315 A 315
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 257
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 258 KKISSESARNYI----QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 313
Query: 119 C 119
Sbjct: 314 A 314
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 243
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 244 KKISSESARNYI----QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
Query: 119 C 119
Sbjct: 300 A 300
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 252
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 253 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 119 C 119
Sbjct: 309 A 309
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 248 KKISSESARNYI----QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 187 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 246
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 247 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 302
Query: 119 C 119
Sbjct: 303 A 303
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 249
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 250 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 119 C 119
Sbjct: 306 A 306
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 259
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 260 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 315
Query: 119 C 119
Sbjct: 316 A 316
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 267
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 268 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 323
Query: 119 C 119
Sbjct: 324 A 324
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 259
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 260 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 315
Query: 119 C 119
Sbjct: 316 A 316
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 249
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 250 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 119 C 119
Sbjct: 306 A 306
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 243
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 244 KKISSESARNYI----QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
Query: 119 C 119
Sbjct: 300 A 300
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 244
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 245 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 300
Query: 119 C 119
Sbjct: 301 A 301
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 248 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 119 C 119
Sbjct: 304 A 304
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 259
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 260 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 315
Query: 119 C 119
Sbjct: 316 A 316
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 270
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 271 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 326
Query: 119 C 119
Sbjct: 327 A 327
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 266
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 267 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 322
Query: 119 C 119
Sbjct: 323 A 323
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 245
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 246 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 301
Query: 119 C 119
Sbjct: 302 A 302
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 244
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 245 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 300
Query: 119 C 119
Sbjct: 301 A 301
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 267
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 268 KKISSESARNYI----QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 323
Query: 119 C 119
Sbjct: 324 A 324
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 243
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 244 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
Query: 119 C 119
Sbjct: 300 A 300
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 253
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 254 KKISSESARNYIQ----SLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 119 C 119
Sbjct: 310 A 310
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 253
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 254 KKISSESARNYI----QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 119 C 119
Sbjct: 310 A 310
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 267
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 268 KKISSESARNYI----QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 323
Query: 119 C 119
Sbjct: 324 A 324
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP D L LI+RL G P E
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 266
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI SL Q + A G P V+LL +ML LD D R+TA AL
Sbjct: 267 KKISSESARNYI----QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 322
Query: 119 C 119
Sbjct: 323 A 323
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y D+W+VGCI AE++ GK LFP D L I+ + G P+ E
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVL 253
Query: 65 P--GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
+ + + SLP DL+ G P ++LL +ML LD D RV+A +AL
Sbjct: 254 AKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALA 310
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y D+W+VGCI AE++ GK LFP D L I+ + G P+ E
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVL 253
Query: 65 P--GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
+ + + SLP DL+ G P ++LL +ML LD D RV+A +AL
Sbjct: 254 AKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALA 310
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y D+W+VGCI AE++ GK LFP D L I+ + G P+ E
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVL 245
Query: 65 P--GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
+ + + SLP DL+ G P ++LL +ML LD D RV+A +AL
Sbjct: 246 AKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALA 302
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 63/115 (54%), Gaps = 6/115 (5%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
Y+APE + S Y TP D+W+VGCIFAEM KPLF CG + D L I L G P ++
Sbjct: 185 YRAPEV-LLQSTYATPVDMWSVGCIFAEMFRRKPLF-CGNSEADQLGKIFDLIGLPPEDD 242
Query: 64 WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
WP +S + P P + +E SG +LL +ML +P R++A AL
Sbjct: 243 WP--RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 295
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 63/115 (54%), Gaps = 6/115 (5%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
Y+APE + S Y TP D+W+VGCIFAEM KPLF CG + D L I L G P ++
Sbjct: 177 YRAPEV-LLQSTYATPVDMWSVGCIFAEMFRRKPLF-CGNSEADQLGKIFDLIGLPPEDD 234
Query: 64 WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
WP +S + P P + +E SG +LL +ML +P R++A AL
Sbjct: 235 WP--RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 287
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 63/115 (54%), Gaps = 6/115 (5%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
Y+APE + S Y TP D+W+VGCIFAEM KPLF CG + D L I L G P ++
Sbjct: 177 YRAPEV-LLQSTYATPVDMWSVGCIFAEMFRRKPLF-CGNSEADQLGKIFDLIGLPPEDD 234
Query: 64 WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
WP +S + P P + +E SG +LL +ML +P R++A AL
Sbjct: 235 WP--RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 287
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 63/115 (54%), Gaps = 6/115 (5%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
Y+APE + S Y TP D+W+VGCIFAEM KPLF CG + D L I L G P ++
Sbjct: 177 YRAPEV-LLQSTYATPVDMWSVGCIFAEMFRRKPLF-CGNSEADQLGKIFDLIGLPPEDD 234
Query: 64 WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
WP +S + P P + +E SG +LL +ML +P R++A AL
Sbjct: 235 WP--RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 287
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 76.3 bits (186), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 65/121 (53%), Gaps = 11/121 (9%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AE+++G+ LFP + L I+RL G P
Sbjct: 217 YRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVI 276
Query: 63 ----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ NYI+ SLPQ + A+ G P V+LL +ML LD D R+TA++AL
Sbjct: 277 SRMPSHEARNYIN----SLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEAL 332
Query: 119 C 119
Sbjct: 333 A 333
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 66/136 (48%), Gaps = 14/136 (10%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE-- 62
Y+APE + Y D+W+VGCI AEM++GK LF D L I+++ G P E
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV 250
Query: 63 TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGT 122
++ + LP+ E D A P V LL +ML LD + RVTA +AL
Sbjct: 251 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEAL---- 306
Query: 123 SEKLLAHAHLYVKTVH 138
AH Y +++H
Sbjct: 307 -------AHPYFESLH 315
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 7/118 (5%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE ++ Y T D+W+ GC+ AE++ G+PLFP D L I+++ G P++E
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI 266
Query: 65 P--GANYISELLHSLPQCEPADLAEKTH-GLEPSGVELLSQMLCLDPDHRVTANDALC 119
NY+ H PQ P ++ P ++L+S++L P R+TA +ALC
Sbjct: 267 KTMNPNYME---HKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 67/140 (47%), Gaps = 21/140 (15%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKET- 63
Y+APE + S+ Y DVW+ GCI AE+ +P+FP H L LI + G P +
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND 247
Query: 64 -----WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
P A E + SLP A L + + P G++LL +ML DP R+TA +AL
Sbjct: 248 LRCIESPRAR---EYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
Query: 119 CIGTSEKLLAHAHLYVKTVH 138
H Y++T H
Sbjct: 305 -----------EHPYLQTYH 313
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 67/140 (47%), Gaps = 21/140 (15%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKET- 63
Y+APE + S+ Y DVW+ GCI AE+ +P+FP H L LI + G P +
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND 247
Query: 64 -----WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
P A E + SLP A L + + P G++LL +ML DP R+TA +AL
Sbjct: 248 LRCIESPRAR---EYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
Query: 119 CIGTSEKLLAHAHLYVKTVH 138
H Y++T H
Sbjct: 305 -----------EHPYLQTYH 313
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 67/140 (47%), Gaps = 21/140 (15%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKET- 63
Y+APE + S+ Y DVW+ GCI AE+ +P+FP H L LI + G P +
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND 247
Query: 64 -----WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
P A E + SLP A L + + P G++LL +ML DP R+TA +AL
Sbjct: 248 LRCIESPRAR---EYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
Query: 119 CIGTSEKLLAHAHLYVKTVH 138
H Y++T H
Sbjct: 305 -----------EHPYLQTYH 313
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 13/122 (10%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
Y+APE + S Y D+W+VGCI AEM+S +P+FP GK D L+ I+ + G+P++E
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 271
Query: 63 -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
NY L SLP A+ + ++LL +ML +P+ R+T +A
Sbjct: 272 LNCIINMKARNY----LQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEA 327
Query: 118 LC 119
L
Sbjct: 328 LA 329
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 16/122 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMV-SGKPLFPCGK-KDHLSLIVRLFGNPTKET 63
Y+ P+ + +Y T D+W+ GCIFAE+ +G+PLFP D L I RL G PT+E
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQ 226
Query: 64 WPGANYISELLHSLPQCEP-------ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAND 116
WP + LP +P L L +G +LL +L +P R++A +
Sbjct: 227 WPS-------MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEE 279
Query: 117 AL 118
AL
Sbjct: 280 AL 281
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 70.5 bits (171), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKET 63
Y+APE + Y D+W+VGCI AEM++GK LF GK D L+ I+++ G P E
Sbjct: 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK-GKDYLDQLTQILKVTGVPGTEF 265
Query: 64 WPGAN--YISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
N + SLPQ D + P +LL +ML LD D R+TA AL
Sbjct: 266 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 70.5 bits (171), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKET 63
Y+APE + Y D+W+VGCI AEM++GK LF GK D L+ I+++ G P E
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK-GKDYLDQLTQILKVTGVPGTEF 247
Query: 64 WPGAN--YISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
N + SLPQ D + P +LL +ML LD D R+TA AL
Sbjct: 248 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 69.3 bits (168), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 16/122 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMV-SGKPLFPCGK-KDHLSLIVRLFGNPTKET 63
Y+ P+ + +Y T D+W+ GCIFAE+ + +PLFP D L I RL G PT+E
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQ 226
Query: 64 WPGANYISELLHSLPQCEP-------ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAND 116
WP + LP +P L L +G +LL +L +P R++A +
Sbjct: 227 WPS-------MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEE 279
Query: 117 AL 118
AL
Sbjct: 280 AL 281
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKETW 64
Y+APE + Y D+W+VGCIF EM++ + LFP H L LI+ + G P+
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 287
Query: 65 P--GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
GA + + SLP +P G + + LL +ML +P R++A AL
Sbjct: 288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAAL 343
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + SS Y TP D+W+VGCIFAEM KPLF D L I+ + G P +E W
Sbjct: 185 YRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
P + +P + + ++ G +LL + L +P R++A AL
Sbjct: 244 PRDVALPRQAFHSKSAQP--IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + SS Y TP D+W+VGCIFAEM KPLF D L I+ + G P +E W
Sbjct: 185 YRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
P + +P + + ++ G +LL + L +P R++A AL
Sbjct: 244 PRDVALPRQAFHSKSAQP--IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKETW 64
Y+APE + Y D+W+VGCIF EM++ + LFP H L LI+ + G P+
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 288
Query: 65 P--GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
GA + + SLP +P G + + LL +ML +P R++A AL
Sbjct: 289 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAAL 344
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + SS Y TP D+W+VGCIFAEM KPLF D L I+ + G P +E W
Sbjct: 185 YRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
P + +P + + ++ G +LL + L +P R++A AL
Sbjct: 244 PRDVALPRQAFHSKSAQP--IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKET 63
Y+APE + S Y D+W+VGCI AEM+S +P+FP GK D L+ I+ + G+P++E
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 253
Query: 64 WP-GANYISE-LLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALC 119
G N + L SLP + ++LL +ML +P R+ AL
Sbjct: 254 LNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 311
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
Y+APE + S Y D+W+VGCI AEM+S +P+FP GK D L+ I+ + G+P++E
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 251
Query: 63 -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
NY L SLP + ++LL +ML +P R+ A
Sbjct: 252 LNXIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 118 LC 119
L
Sbjct: 308 LA 309
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
Y+APE + S Y D+W+VGCI AEM+S +P+FP GK D L+ I+ + G+P++E
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 251
Query: 63 -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
NY L SLP + ++LL +ML +P R+ A
Sbjct: 252 LNXIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 118 LC 119
L
Sbjct: 308 LA 309
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
Y+APE + S Y D+W+VGCI AEM+S +P+FP GK D L+ I+ + G+P++E
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 251
Query: 63 -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
NY L SLP + ++LL +ML +P R+ A
Sbjct: 252 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 118 LC 119
L
Sbjct: 308 LA 309
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
Y+APE + S Y D+W+VGCI AEM+S +P+FP GK D L+ I+ + G+P++E
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 255
Query: 63 -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
NY L SLP + ++LL +ML +P R+ A
Sbjct: 256 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 118 LC 119
L
Sbjct: 312 LA 313
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
Y+APE + S Y D+W+VGCI AEM+S +P+FP GK D L+ I+ + G+P++E
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 255
Query: 63 -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
NY L SLP + ++LL +ML +P R+ A
Sbjct: 256 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 118 LC 119
L
Sbjct: 312 LA 313
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
Y+APE + S Y D+W+VGCI AEM+S +P+FP GK D L+ I+ + G+P++E
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 251
Query: 63 -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
NY L SLP + ++LL +ML +P R+ A
Sbjct: 252 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 118 LC 119
L
Sbjct: 308 LA 309
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
Y+APE + S Y D+W+VGCI AEM+S +P+FP GK D L+ I+ + G+P++E
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 249
Query: 63 -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
NY L SLP + ++LL +ML +P R+ A
Sbjct: 250 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 305
Query: 118 LC 119
L
Sbjct: 306 LA 307
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
Y+APE + S Y D+W+VGCI AEM+S +P+FP GK D L+ I+ + G+P++E
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 253
Query: 63 -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
NY L SLP + ++LL +ML +P R+ A
Sbjct: 254 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 309
Query: 118 LC 119
L
Sbjct: 310 LA 311
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
Y+APE + S Y D+W+VGCI AEM+S +P+FP GK D L+ I+ + G+P++E
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 253
Query: 63 -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
NY L SLP + ++LL +ML +P R+ A
Sbjct: 254 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 309
Query: 118 LC 119
L
Sbjct: 310 LA 311
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
Y+APE + S Y D+W+VGCI AEM+S +P+FP GK D L+ I+ + G+P++E
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 271
Query: 63 -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
NY L SLP + ++LL +ML +P R+ A
Sbjct: 272 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 327
Query: 118 LC 119
L
Sbjct: 328 LA 329
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
Y+APE + S Y D+W+VGCI AEM+S +P+FP GK D L+ I+ + G+P++E
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 255
Query: 63 -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
NY L SLP + ++LL +ML +P R+ A
Sbjct: 256 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 118 LC 119
L
Sbjct: 312 LA 313
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
Y+APE + S Y D+W+VGCI AEM+S +P+FP GK D L+ I+ + G+P++E
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 255
Query: 63 -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
NY L SLP + ++LL +ML +P R+ A
Sbjct: 256 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 118 LC 119
L
Sbjct: 312 LA 313
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
Y+APE + S Y D+W+VGCI AEM+S +P+FP GK D L+ I+ + G+P++E
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 271
Query: 63 -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
NY L SLP + ++LL +ML +P R+ A
Sbjct: 272 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 327
Query: 118 LC 119
L
Sbjct: 328 LA 329
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
Y+APE + S Y D+W+VGCI AEM+S +P+FP GK D L+ I+ + G+P++E
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 256
Query: 63 -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
NY L SLP + ++LL +ML +P R+ A
Sbjct: 257 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 312
Query: 118 LC 119
L
Sbjct: 313 LA 314
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
Y+APE + S Y D+W+VGCI AEM+S +P+FP GK D L+ I+ + G+P++E
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 256
Query: 63 -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
NY L SLP + ++LL +ML +P R+ A
Sbjct: 257 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 312
Query: 118 LC 119
L
Sbjct: 313 LA 314
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
Y+APE + S Y D+W+VGCI AEM+S +P+FP GK D L+ I+ + G+P++E
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 257
Query: 63 -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
NY L SLP + ++LL +ML +P R+ A
Sbjct: 258 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 313
Query: 118 LC 119
L
Sbjct: 314 LA 315
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
Y+APE + S Y D+W+VGCI AEM+S +P+FP GK D L+ I+ + G+P++E
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 248
Query: 63 -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
NY L SLP + ++LL +ML +P R+ A
Sbjct: 249 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 304
Query: 118 LC 119
L
Sbjct: 305 LA 306
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
Y+APE + S Y D+W+VGCI AEM+S +P+FP GK D L+ I+ + G+P++E
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 255
Query: 63 -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
NY L SLP + ++LL +ML +P R+ A
Sbjct: 256 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 118 LC 119
L
Sbjct: 312 LA 313
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
Y+APE + S Y D+W+VGCI AEM+S +P+FP GK D L+ I+ + G+P++E
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 259
Query: 63 -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
NY L SLP + ++LL +ML +P R+ A
Sbjct: 260 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 315
Query: 118 LC 119
L
Sbjct: 316 LA 317
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
Y+APE + S Y D+W+VGCI AEM+S +P+FP GK D L+ I+ + G+P++E
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 251
Query: 63 -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
NY L SLP + ++LL +ML +P R+ A
Sbjct: 252 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 118 LC 119
L
Sbjct: 308 LA 309
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPT 60
V Y+ PE + Y P D+W GCI AEM + P+ + H L+LI +L G+ T
Sbjct: 190 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249
Query: 61 KETWPGA-NYISELLHSLP----QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
E WP NY EL L Q K + +P ++L+ ++L LDP R+ ++
Sbjct: 250 PEVWPNVDNY--ELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD 307
Query: 116 DAL 118
DAL
Sbjct: 308 DAL 310
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPT 60
V Y+ PE + Y P D+W GCI AEM + P+ + H L+LI +L G+ T
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 250
Query: 61 KETWPGA-NYISELLHSLP----QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
E WP NY EL L Q K + +P ++L+ ++L LDP R+ ++
Sbjct: 251 PEVWPNVDNY--ELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD 308
Query: 116 DAL 118
DAL
Sbjct: 309 DAL 311
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
Y+APE + S Y D+W+VGCI AEM+S +P+FP GK D L+ I+ + G+P++E
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPSQED 255
Query: 63 -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
NY L SLP + ++LL +ML +P R+ A
Sbjct: 256 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 118 LC 119
L
Sbjct: 312 LA 313
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPT 60
V Y+ PE + Y P D+W GCI AEM + P+ + H L+LI +L G+ T
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 250
Query: 61 KETWPGA-NYISELLHSLP----QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
E WP NY EL L Q K + +P ++L+ ++L LDP R+ ++
Sbjct: 251 PEVWPNVDNY--ELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD 308
Query: 116 DAL 118
DAL
Sbjct: 309 DAL 311
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRLFGNPTKETW 64
Y+ PE + Y P D+W GCI AEM + P+ + H L+LI +L G+ T E W
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 254
Query: 65 PGA-NYISELLHSLP----QCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
P NY EL L Q K + +P ++L+ ++L LDP R+ ++DAL
Sbjct: 255 PNVDNY--ELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 311
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 5/117 (4%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + ++ Y D+W++GC+F E++ GKPLF D L I+++ G PTKE
Sbjct: 207 YRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQM 266
Query: 65 PGAN-YISELLHSLPQCEPADLAEKTHGLEPS-GVELLSQMLCLDPDHRVTANDALC 119
N + +E+ P + D + PS ++LL Q+L +PD R+ +A+
Sbjct: 267 IRMNPHYTEV--RFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA 321
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+ PE + S Y T D+W++ CI+AEM+ PLFP + D L I + G P TW
Sbjct: 203 YRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTW 262
Query: 65 PGANYISELLHSLPQCEPADLAEKTHG-LEPSGVELLSQMLCLDPDHRVTANDAL 118
PG + + S P+ L L+ G++LL+ ML +DP R++A +AL
Sbjct: 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNAL 317
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 59/122 (48%), Gaps = 13/122 (10%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKE- 62
Y+APE + S Y D+W+VGCI AEM+S +P+FP GK D L+ I+ + G+P +E
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP-GKHYLDQLNHILGILGSPEQED 249
Query: 63 -----TWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDA 117
NY L SLP + ++LL +ML +P R+ A
Sbjct: 250 LNCIINLKARNY----LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 305
Query: 118 LC 119
L
Sbjct: 306 LA 307
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 34/148 (22%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVS-----------GKPLFPC----------- 43
Y+APE + Y DVW++GCIFAE+++ PLFP
Sbjct: 249 YRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQK 308
Query: 44 ----------GKKDHLSLIVRLFGNPTKETWPG--ANYISELLHSLPQCEPADLAEKTHG 91
G +D L++I + G P++E + P+ E DLAE+
Sbjct: 309 AGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPA 368
Query: 92 LEPSGVELLSQMLCLDPDHRVTANDALC 119
+ LL +ML +P+ R+T N+ L
Sbjct: 369 SSADAIHLLKRMLVFNPNKRITINECLA 396
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 21/137 (15%)
Query: 2 VEFPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK----------DHLSL 51
V F Y+APE + + Y D+WA+GCIFAE+++ +P+F C ++ D L
Sbjct: 197 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 256
Query: 52 IVRLFGNPTKETWPGANYISE--------LLHSLPQCEPADLAEKTHGLEPS--GVELLS 101
I + G P + W + E ++ C EK H ++P LL
Sbjct: 257 IFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEK-HKVKPDSKAFHLLQ 315
Query: 102 QMLCLDPDHRVTANDAL 118
++L +DP R+T+ A+
Sbjct: 316 KLLTMDPIKRITSEQAM 332
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 31/144 (21%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK-----------PLFP---C-------- 43
Y+APE + Y D+W+ GCIFAE+++ PLFP C
Sbjct: 217 YRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRN 276
Query: 44 -------GKKDHLSLIVRLFGNPTKETWPGANY--ISELLHSLPQCEPADLAEKTHGLEP 94
+D L++I + G PT++ N + + + P +P +L +K +
Sbjct: 277 SKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISD 336
Query: 95 SGVELLSQMLCLDPDHRVTANDAL 118
G+ LL ML +P+ R+T + AL
Sbjct: 337 DGINLLESMLKFNPNKRITIDQAL 360
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 19/132 (14%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKE-- 62
Y+APE + S+ Y D+W++GCI E++ GKP+FP + L I+ + P+ E
Sbjct: 196 YRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDV 255
Query: 63 ---TWPGANYISELLH---SLPQCEPADLAEKTHGL----------EPSGVELLSQMLCL 106
P A + E L + Q D+ K L ++LL ++L
Sbjct: 256 ESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQF 315
Query: 107 DPDHRVTANDAL 118
+P+ R++ANDAL
Sbjct: 316 NPNKRISANDAL 327
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPT--- 60
Y++PE + + Y P DVWA+GC+FAE++SG PL+P GK D L LI + G+
Sbjct: 168 YRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWP-GKSDVDQLYLIRKTLGDLIPRH 226
Query: 61 KETWPGANYISELLHSLPQ-CEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
++ + Y S + P+ EP +L K + + LL L +DP R+T L
Sbjct: 227 QQVFSTNQYFSGVKIPDPEDMEPLEL--KFPNISYPALGLLKGCLHMDPTERLTCEQLL 283
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + Y T D+W+VGCIFAEM+ G+P+F L IVR+ G P++E
Sbjct: 197 YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVL 256
Query: 65 PGAN---YISELLHSLPQCEPADLAEKTHGLEPS--GVELLSQMLCLDPDHRVTANDALC 119
N +L +S + P H L+ + +LLS +L P+ R+ +ALC
Sbjct: 257 RKLNPSHTDVDLYNS--KGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
Y+APE I Y D+W+VGCI EMV K LFP G+ D + ++ G P
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 248
Query: 60 TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
K+ P NY+ + P+ P L A+ H L+ S +LLS+ML +DP
Sbjct: 249 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 308
Query: 111 RVTANDAL 118
R++ +DAL
Sbjct: 309 RISVDDAL 316
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
Y+APE I Y D+W+VGCI EMV K LFP G+ D + ++ G P
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 248
Query: 60 TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
K+ P NY+ + P+ P L A+ H L+ S +LLS+ML +DP
Sbjct: 249 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 308
Query: 111 RVTANDAL 118
R++ +DAL
Sbjct: 309 RISVDDAL 316
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
Y+APE I Y D+W+VGCI EMV K LFP G+ D + ++ G P
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 248
Query: 60 TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
K+ P NY+ + P+ P L A+ H L+ S +LLS+ML +DP
Sbjct: 249 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 308
Query: 111 RVTANDAL 118
R++ +DAL
Sbjct: 309 RISVDDAL 316
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
Y+APE I Y D+W+VGCI EMV K LFP G+ D + ++ G P
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 248
Query: 60 TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
K+ P NY+ + P+ P L A+ H L+ S +LLS+ML +DP
Sbjct: 249 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 308
Query: 111 RVTANDAL 118
R++ +DAL
Sbjct: 309 RISVDDAL 316
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
Y+APE I Y D+W+VGCI EMV K LFP G+ D + ++ G P
Sbjct: 184 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 241
Query: 60 TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
K+ P NY+ + P+ P L A+ H L+ S +LLS+ML +DP
Sbjct: 242 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 301
Query: 111 RVTANDAL 118
R++ +DAL
Sbjct: 302 RISVDDAL 309
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
Y+APE I Y D+W+VGCI EMV K LFP G+ D + ++ G P
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 248
Query: 60 TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
K+ P NY+ + P+ P L A+ H L+ S +LLS+ML +DP
Sbjct: 249 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 308
Query: 111 RVTANDAL 118
R++ +DAL
Sbjct: 309 RISVDDAL 316
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 16/121 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE + +Y D+WAVGCI AE++ P P D L+ I G PT+E W
Sbjct: 178 YRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQW 237
Query: 65 PGA----NYISELLHSLPQCEPADLAEKTHGLEPSG---VELLSQMLCLDPDHRVTANDA 117
P +Y++ S P H +G ++L+ + +P R+TA A
Sbjct: 238 PDMCSLPDYVT--FKSFPGI------PLHHIFSAAGDDLLDLIQGLFLFNPCARITATQA 289
Query: 118 L 118
L
Sbjct: 290 L 290
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
Y+APE I Y D+W+VGCI EMV K LFP G+ D + ++ G P
Sbjct: 192 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 249
Query: 60 TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
K+ P NY+ + P+ P L A+ H L+ S +LLS+ML +DP
Sbjct: 250 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 309
Query: 111 RVTANDAL 118
R++ +DAL
Sbjct: 310 RISVDDAL 317
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
Y+APE I Y D+W+VGCI EMV K LFP G+ D + ++ G P
Sbjct: 192 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 249
Query: 60 TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
K+ P NY+ + P+ P L A+ H L+ S +LLS+ML +DP
Sbjct: 250 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 309
Query: 111 RVTANDAL 118
R++ +DAL
Sbjct: 310 RISVDDAL 317
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
Y+APE I Y D+W+VGCI EMV K LFP G+ D + ++ G P
Sbjct: 190 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 247
Query: 60 TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
K+ P NY+ + P+ P L A+ H L+ S +LLS+ML +DP
Sbjct: 248 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 307
Query: 111 RVTANDAL 118
R++ +DAL
Sbjct: 308 RISVDDAL 315
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
Y+APE I Y D+W+VGCI EMV K LFP G+ D + ++ G P
Sbjct: 184 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 241
Query: 60 TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
K+ P NY+ + P+ P L A+ H L+ S +LLS+ML +DP
Sbjct: 242 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 301
Query: 111 RVTANDAL 118
R++ +DAL
Sbjct: 302 RISVDDAL 309
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
Y+APE I Y D+W+VGCI EMV K LFP G+ D + ++ G P
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 248
Query: 60 TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
K+ P NY+ + P+ P L A+ H L+ S +LLS+ML +DP
Sbjct: 249 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 308
Query: 111 RVTANDAL 118
R++ +DAL
Sbjct: 309 RISVDDAL 316
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
Y+APE I Y D+W+VGCI EMV K LFP G+ D + ++ G P
Sbjct: 185 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 242
Query: 60 TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
K+ P NY+ + P+ P L A+ H L+ S +LLS+ML +DP
Sbjct: 243 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 302
Query: 111 RVTANDAL 118
R++ +DAL
Sbjct: 303 RISVDDAL 310
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
Y+APE I Y D+W+VGCI EMV K LFP G+ D + ++ G P
Sbjct: 185 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 242
Query: 60 TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
K+ P NY+ + P+ P L A+ H L+ S +LLS+ML +DP
Sbjct: 243 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 302
Query: 111 RVTANDAL 118
R++ +DAL
Sbjct: 303 RISVDDAL 310
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
Y+APE I Y D+W+VGCI EMV K LFP G+ D + ++ G P
Sbjct: 229 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 286
Query: 60 TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
K+ P NY+ + P+ P L A+ H L+ S +LLS+ML +DP
Sbjct: 287 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 346
Query: 111 RVTANDAL 118
R++ +DAL
Sbjct: 347 RISVDDAL 354
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
Y+APE I Y D+W+VGCI EMV K LFP G+ D + ++ G P
Sbjct: 229 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFP-GRDYIDQWNKVIEQLGTPCPEF 286
Query: 60 TKETWPGA-NYISELLH----SLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
K+ P NY+ + P+ P L A+ H L+ S +LLS+ML +DP
Sbjct: 287 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 346
Query: 111 RVTANDAL 118
R++ +DAL
Sbjct: 347 RISVDDAL 354
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 42/163 (25%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK-----------PLFP---C-------- 43
Y+APE + Y D+W+ GCIFAE+++ PLFP C
Sbjct: 222 YRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFPLSPDHN 281
Query: 44 -------GKKDHLSLIVRLFGNPTKETWP--GANYISELLHSLPQCEPADLAEKTHGLEP 94
+D L++I + G P +E + + + P + DL++K +
Sbjct: 282 SKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFPTRDGIDLSKKYSSISK 341
Query: 95 SGVELLSQMLCLDPDHRVTANDALCIGTSEKLLAHAHLYVKTV 137
G++LL ML + R+T + AL +H Y+K V
Sbjct: 342 EGIDLLESMLRFNAQKRITIDKAL-----------SHPYLKDV 373
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE ++ Y + DVW+ GC+ AE++ G+P+FP D L I+++ G PT+E
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247
Query: 65 P--GANYISELLHSLPQCEPADLAEKTH-GLEPSGVELLSQMLCLDPDHRVTANDA 117
NY + PQ + + P + L S++L P R+T +A
Sbjct: 248 REMNPNYTE---FAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEA 300
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
Y+APE ++ Y + DVW+ GC+ AE++ G+P+FP D L I+++ G PT+E
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 250
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
Y+APE ++ Y + DVW+ GC+ AE++ G+P+FP D L I+++ G PT+E
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 273
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
Y+APE ++ Y + DVW+ GC+ AE++ G+P+FP D L I+++ G PT+E
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 279
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
Y+APE ++ Y + DVW+ GC+ AE++ G+P+FP D L I+++ G PT+E
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 283
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
Y+APE ++ Y + DVW+ GC+ AE++ G+P+FP D L I+++ G PT+E
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 257
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
Y+APE ++ Y + DVW+ GC+ AE++ G+P+FP D L I+++ G PT+E
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 264
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
Y+APE ++ Y + DVW+ GC+ AE++ G+P+FP D L I+++ G PT+E
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 258
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
Y+APE ++ Y + DVW+ GC+ AE++ G+P+FP D L I+++ G PT+E
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 281
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE ++ Y + DVW+ GC+ AE++ G+P+FP D L I+++ G PT+E
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247
Query: 65 P--GANYISELLHSLPQCEPADLAEKTH-GLEPSGVELLSQMLCLDPDHRVTANDA 117
NY + PQ + + P + L S++L P R+T +A
Sbjct: 248 REMNPNYTE---FAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEA 300
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
Y+APE ++ Y + DVW+ GC+ AE++ G+P+FP D L I+++ G PT+E
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 253
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
Y+APE ++ Y + DVW+ GC+ AE++ G+P+FP D L I+++ G PT+E
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 257
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
Y+APE ++ Y + DVW+ GC+ AE++ G+P+FP D L I+++ G PT+E
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
Y+APE ++ Y + DVW+ GC+ AE++ G+P+FP D L I+++ G PT+E
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
Y+APE ++ Y + DVW+ GC+ AE++ G+P+FP D L I+++ G PT+E
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
Y+APE ++ Y + DVW+ GC+ AE++ G+P+FP D L I+++ G PT+E
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 249
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
Y+APE ++ Y + DVW+ GC+ AE++ G+P+FP D L I+++ G PT+E
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
Y+APE ++ Y + DVW+ GC+ AE++ G+P+FP D L I+++ G PT+E
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 246
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
Y+APE ++ Y + DVW+ GC+ AE++ G+P+FP D L I+++ G PT+E
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 245
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 53.1 bits (126), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
Y+APE ++ Y + DVW+ GC+ AE++ G+P+FP D L I+++ G PT+E
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 324
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 53.1 bits (126), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
Y+APE ++ Y + DVW+ GC+ AE++ G+P+FP D L I+++ G PT+E
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE 279
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y++P + + Y D+WA GCIFAEM++GK LF + + + LI+ +E
Sbjct: 190 YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDR 249
Query: 65 PGANYISELLHSLPQCEPADLAEKTH-------GLEPSGVELLSQMLCLDPDHRVTANDA 117
ELL +P D+ E G+ V+ L Q+L P R+TA +A
Sbjct: 250 ------QELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEA 303
Query: 118 LC 119
L
Sbjct: 304 LS 305
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 15/127 (11%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
Y+APE I Y D+W+VGCI E+V G +F D + ++ G P+ E
Sbjct: 189 YRAPEV-ILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFM 247
Query: 65 PG-----ANYISE--------LLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHR 111
NY+ P +E+ +LLS+ML +DPD R
Sbjct: 248 AALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKR 307
Query: 112 VTANDAL 118
++ ++AL
Sbjct: 308 ISVDEAL 314
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
Y+APE I + Y P D+W++GCI AE+++G PL P + D L+ ++ L G P+++
Sbjct: 265 YRAPEV-ILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQK 321
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 15/127 (11%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
Y+APE I Y D+W+VGCI E+V G +F D + ++ G P+ E
Sbjct: 191 YRAPEV-ILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFM 249
Query: 65 PG-----ANYIS--------ELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHR 111
NY+ + P +E+ +LLS+ML +DPD R
Sbjct: 250 AALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKR 309
Query: 112 VTANDAL 118
++ ++AL
Sbjct: 310 ISVDEAL 316
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGN--PTKE 62
Y+APE + Y DVWA+GC+ EM G+PLFP D L I+ GN P +
Sbjct: 190 YRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQ 249
Query: 63 TWPGAN--YISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHR 111
N + L + + EP L + L ++L + L +DPD R
Sbjct: 250 ELFNKNPVFAGVRLPEIKEREP--LERRYPKLSEVVIDLAKKCLHIDPDKR 298
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 49.7 bits (117), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKE 62
Y+APE I + Y P D+W++GCI AE+++G PL P + D L+ ++ L G P ++
Sbjct: 265 YRAPEV-ILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQK 321
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPC-GKKDHLSLIVRLFGNPTKE 62
Y+APE I + Y P D+W++GCI AE+++G PL P + D L+ ++ L G P+++
Sbjct: 265 YRAPEV-ILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQK 321
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE I Y D+W+VGCI EM+ G LFP D + ++ G P+ E
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 65 PGAN-YISELLHSLPQCE-------------PADLAEKTHGLEPSGVELLSQMLCLDPDH 110
+ + + P+ PAD +E +LLS+ML +D
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPAD-SEHNKLKASQARDLLSKMLVIDASK 308
Query: 111 RVTANDAL 118
R++ ++AL
Sbjct: 309 RISVDEAL 316
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE I Y D+W+VGCI EM+ G LFP D + ++ G P+ E
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 65 PGAN-YISELLHSLPQCE-------------PADLAEKTHGLEPSGVELLSQMLCLDPDH 110
+ + + P+ PAD +E +LLS+ML +D
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPAD-SEHNKLKASQARDLLSKMLVIDASK 308
Query: 111 RVTANDAL 118
R++ ++AL
Sbjct: 309 RISVDEAL 316
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE I Y D+W+VGCI EM+ G LFP D + ++ G P+ E
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 65 PGAN-YISELLHSLPQCE-------------PADLAEKTHGLEPSGVELLSQMLCLDPDH 110
+ + + P+ PAD +E +LLS+ML +D
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPAD-SEHNKLKASQARDLLSKMLVIDASK 308
Query: 111 RVTANDAL 118
R++ ++AL
Sbjct: 309 RISVDEAL 316
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE I Y D+W+VGCI EM+ G LFP D + ++ G P+ E
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 65 PGAN-YISELLHSLPQCE-------------PADLAEKTHGLEPSGVELLSQMLCLDPDH 110
+ + + P+ PAD +E +LLS+ML +D
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPAD-SEHNKLKASQARDLLSKMLVIDASK 308
Query: 111 RVTANDAL 118
R++ ++AL
Sbjct: 309 RISVDEAL 316
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y+APE I Y D+W+VGCI EM+ G LFP D + ++ G P+ E
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 65 PGAN-YISELLHSLPQCE-------------PADLAEKTHGLEPSGVELLSQMLCLDPDH 110
+ + + P+ PAD +E +LLS+ML +D
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPAD-SEHNKLKASQARDLLSKMLVIDASK 308
Query: 111 RVTANDAL 118
R++ ++AL
Sbjct: 309 RISVDEAL 316
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKE-- 62
Y+APE + + D+W+ GC+ AEM + K LF + L+ IV + G P E
Sbjct: 199 YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDV 258
Query: 63 ---TWPGA-NYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ P A +Y+ L ++P + +P ++L+++ML +P R++ AL
Sbjct: 259 VMFSSPSARDYLRNSLSNVPARAWTAVVPTA---DPVALDLIAKMLEFNPQRRISTEQAL 315
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKE-- 62
Y+APE + + D+W+ GC+ AEM + K LF + L+ IV + G P E
Sbjct: 199 YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDV 258
Query: 63 ---TWPGA-NYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ P A +Y+ L ++P + +P ++L+++ML +P R++ AL
Sbjct: 259 VMFSSPSARDYLRNSLSNVPARAWTAVVPTA---DPVALDLIAKMLEFNPQRRISTEQAL 315
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIV--------RLFG 57
+K PE + +Y D+W++GC+ A M+ + F G+ ++ L+ L+G
Sbjct: 203 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYG 262
Query: 58 NPTKETWPGANYISELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
K + +++L HS + E +E H + P ++LL ++L D R+TA
Sbjct: 263 YLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAK 322
Query: 116 DAL 118
+A+
Sbjct: 323 EAM 325
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNPTKET 63
+K PE + +Y D+W++GC+ A M+ + F G+ D L I ++ G
Sbjct: 198 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYG 257
Query: 64 WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ +I +++L HS + E +E H + P ++LL ++L D R+TA
Sbjct: 258 YLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAK 317
Query: 116 DAL 118
+A+
Sbjct: 318 EAM 320
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
Y+APE I Y D+W+VGCI EMV K LFP G+ D + ++ G P
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMVCHKILFP-GRDYIDQWNKVIEQLGTPCPAF 248
Query: 60 TKETWPGA-NYISEL----LHSLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
K+ P NY+ +S + P L A+ H L+ S +LLS+ML +D
Sbjct: 249 MKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308
Query: 111 RVTANDAL 118
R++ ++AL
Sbjct: 309 RISVDEAL 316
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNP----T 60
Y+APE I Y D+W+VGCI EM+ G LFP D + ++ G P
Sbjct: 193 YRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 251
Query: 61 KETWPG-----------ANYISELLHSLPQC-EPADLAEKTHGLEPSGVELLSQMLCLDP 108
K+ P A Y E L P PAD +E +LLS+ML +D
Sbjct: 252 KKLQPTVRTYVENRPKYAGYSFEKL--FPDVLFPAD-SEHNKLKASQARDLLSKMLVIDA 308
Query: 109 DHRVTANDAL 118
R++ ++AL
Sbjct: 309 SKRISVDEAL 318
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNP----T 60
Y+APE I Y D+W+VGCI EM+ G LFP D + ++ G P
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 249
Query: 61 KETWPGANYISELL-----HSLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDHR 111
K+ P E +S + P L A+ H L+ S +LLS+ML +D R
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 112 VTANDAL 118
++ ++AL
Sbjct: 310 ISVDEAL 316
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNP----T 60
Y+APE I Y D+W+VGCI EM+ G LFP D + ++ G P
Sbjct: 192 YRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 250
Query: 61 KETWPGANYISELL-----HSLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDHR 111
K+ P E +S + P L A+ H L+ S +LLS+ML +D R
Sbjct: 251 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 310
Query: 112 VTANDAL 118
++ ++AL
Sbjct: 311 ISVDEAL 317
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNP----T 60
Y+APE I Y D+W+VGCI EM+ G LFP D + ++ G P
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 249
Query: 61 KETWPGANYISELL-----HSLPQCEPADL--AEKTH-GLEPSGV-ELLSQMLCLDPDHR 111
K+ P E +S + P L A+ H L+ S +LLS+ML +D R
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKR 309
Query: 112 VTANDAL 118
++ ++AL
Sbjct: 310 ISVDEAL 316
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
Y+APE I Y D+W+VG I EM+ G LFP D + ++ G P+ E
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 65 PGAN-YISELLHSLPQCE-------------PADLAEKTHGLEPSGVELLSQMLCLDPDH 110
+ + + P+ PAD +E +LLS+ML +D
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPAD-SEHNKLKASQARDLLSKMLVIDASK 308
Query: 111 RVTANDAL 118
R++ ++AL
Sbjct: 309 RISVDEAL 316
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVRLFGNPTKETW 64
Y+APE I Y D+W+VG I EM+ G LFP D + ++ G P+ E
Sbjct: 191 YRAPEV-ILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 65 PGAN-YISELLHSLPQCE-------------PADLAEKTHGLEPSGVELLSQMLCLDPDH 110
+ + + P+ PAD +E +LLS+ML +D
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPAD-SEHNKLKASQARDLLSKMLVIDASK 308
Query: 111 RVTANDAL 118
R++ ++AL
Sbjct: 309 RISVDEAL 316
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
+K PE + +Y D+W++GC+ A M+ K F G D L I ++ G
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 64 WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I +++L HS + E +E H + P ++ L ++L D R+TA
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 116 DAL 118
+A+
Sbjct: 317 EAM 319
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
+K PE + +Y D+W++GC+ A M+ K F G D L I ++ G
Sbjct: 195 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 254
Query: 64 WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I +++L HS + E +E H + P ++ L ++L D R+TA
Sbjct: 255 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 314
Query: 116 DAL 118
+A+
Sbjct: 315 EAM 317
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
+K PE + +Y D+W++GC+ A M+ K F G D L I ++ G
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 64 WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I +++L HS + E +E H + P ++ L ++L D R+TA
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 116 DAL 118
+A+
Sbjct: 317 EAM 319
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
+K PE + +Y D+W++GC+ A M+ K F G D L I ++ G
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 64 WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I +++L HS + E +E H + P ++ L ++L D R+TA
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 116 DAL 118
+A+
Sbjct: 317 EAM 319
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
+K PE + +Y D+W++GC+ A M+ K F G D L I ++ G
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 64 WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I +++L HS + E +E H + P ++ L ++L D R+TA
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 116 DAL 118
+A+
Sbjct: 317 EAM 319
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
+K PE + +Y D+W++GC+ A M+ K F G D L I ++ G
Sbjct: 196 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 255
Query: 64 WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I +++L HS + E +E H + P ++ L ++L D R+TA
Sbjct: 256 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 315
Query: 116 DAL 118
+A+
Sbjct: 316 EAM 318
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
+K PE + +Y D+W++GC+ A M+ K F G D L I ++ G
Sbjct: 196 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 255
Query: 64 WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I +++L HS + E +E H + P ++ L ++L D R+TA
Sbjct: 256 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 315
Query: 116 DAL 118
+A+
Sbjct: 316 EAM 318
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
+K PE + +Y D+W++GC+ A M+ K F G D L I ++ G
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 64 WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I +++L HS + E +E H + P ++ L ++L D R+TA
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 116 DAL 118
+A+
Sbjct: 317 EAM 319
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
+K PE + +Y D+W++GC+ A M+ K F G D L I ++ G
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 64 WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I +++L HS + E +E H + P ++ L ++L D R+TA
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 116 DAL 118
+A+
Sbjct: 317 EAM 319
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
+K PE + +Y D+W++GC+ A M+ K F G D L I ++ G
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 64 WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I +++L HS + E +E H + P ++ L ++L D R+TA
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 116 DAL 118
+A+
Sbjct: 317 EAM 319
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
+K PE + +Y D+W++GC+ A M+ K F G D L I ++ G
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 64 WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I +++L HS + E +E H + P ++ L ++L D R+TA
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 116 DAL 118
+A+
Sbjct: 317 EAM 319
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
+K PE + +Y D+W++GC+ A M+ K F G D L I ++ G
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 64 WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I +++L HS + E +E H + P ++ L ++L D R+TA
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 116 DAL 118
+A+
Sbjct: 317 EAM 319
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
+K PE + +Y D+W++GC+ A M+ K F G D L I ++ G
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 64 WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I +++L HS + E +E H + P ++ L ++L D R+TA
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 116 DAL 118
+A+
Sbjct: 317 EAM 319
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
+K PE + +Y D+W++GC+ A M+ K F G D L I ++ G
Sbjct: 202 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 261
Query: 64 WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I +++L HS + E +E H + P ++ L ++L D R+TA
Sbjct: 262 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 321
Query: 116 DAL 118
+A+
Sbjct: 322 EAM 324
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
Y+APE I Y D+W+VGCI EMV K LFP G+ D + ++ G P
Sbjct: 191 YRAPEV-ILGMGYKENVDLWSVGCIMGEMVCHKILFP-GRDYIDQWNKVIEQLGTPCPEF 248
Query: 60 TKETWPGANYISELL-----HSLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
K+ P E +S + P L A+ H L+ S +LLS+ML +D
Sbjct: 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308
Query: 111 RVTANDAL 118
R++ ++AL
Sbjct: 309 RISVDEAL 316
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 17/128 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
Y+APE I Y D+W+VGCI EMV K LFP G+ D + ++ G P
Sbjct: 185 YRAPEV-ILGMGYKENVDLWSVGCIMGEMVCHKILFP-GRDYIDQWNKVIEQLGTPCPEF 242
Query: 60 TKETWPGANYISELL-----HSLPQCEPADL--AEKTHG-LEPSGV-ELLSQMLCLDPDH 110
K+ P E +S + P L A+ H L+ S +LLS+ML +D
Sbjct: 243 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 302
Query: 111 RVTANDAL 118
R++ ++AL
Sbjct: 303 RISVDEAL 310
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCG--KKDHLSLIVRLFGNPTKET 63
+K PE + +Y D+W++GC+ A M+ K F G D L I ++ G
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 64 WPGANYI------SELL--HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I +++L HS + E +E H + P ++ L ++L D R+TA
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 116 DAL 118
+A+
Sbjct: 317 EAM 319
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 23/131 (17%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK--DHLSLIVRLFGNP---- 59
Y+APE I Y D+W+VGCI EMV K LFP G+ D + ++ G P
Sbjct: 196 YRAPEV-ILGMGYKENVDLWSVGCIMGEMVCHKILFP-GRDYIDQWNKVIEQLGTPCPEF 253
Query: 60 TKETWPG-----------ANYISELLHSLPQC-EPADLAEKTHGLEPSGVELLSQMLCLD 107
K+ P A Y E L P PAD +E +LLS+ML +D
Sbjct: 254 MKKLQPTVRTYVENRPKYAGYSFEKL--FPDVLFPAD-SEHNKLKASQARDLLSKMLVID 310
Query: 108 PDHRVTANDAL 118
R++ ++AL
Sbjct: 311 ASKRISVDEAL 321
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 17/129 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPC-GKKDHLSLIVRLFG------- 57
Y+APE I + + P DVW++GCI E G +FP K+HL+++ R+ G
Sbjct: 200 YRAPEV-ILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMI 258
Query: 58 -NPTKETWPGANYISELLHSLP------QCEPADLAEKTHGLEPSGV-ELLSQMLCLDPD 109
K + + + HS C+P + +E + +L+ +ML DP
Sbjct: 259 QKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPA 318
Query: 110 HRVTANDAL 118
R+T +AL
Sbjct: 319 KRITLREAL 327
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 17/129 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPC-GKKDHLSLIVRLFG------- 57
Y+APE I + + P DVW++GCI E G +FP K+HL+++ R+ G
Sbjct: 200 YRAPEV-ILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMI 258
Query: 58 -NPTKETWPGANYISELLHSLP------QCEPADLAEKTHGLEPSGV-ELLSQMLCLDPD 109
K + + + HS C+P + +E + +L+ +ML DP
Sbjct: 259 QKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPA 318
Query: 110 HRVTANDAL 118
R+T +AL
Sbjct: 319 KRITLREAL 327
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSL--IVRLFGNPTKET 63
+K PE + Y D+W++GC+FA M+ K F G +H L I ++ G
Sbjct: 192 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 251
Query: 64 WPGANYIS-----ELL---HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I E L HS A+ H + P ++ L ++L D R+TA
Sbjct: 252 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 311
Query: 116 DALC 119
+A+
Sbjct: 312 EAMT 315
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSL--IVRLFGNPTKET 63
+K PE + Y D+W++GC+FA M+ K F G +H L I ++ G
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 64 WPGANYIS-----ELL---HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I E L HS A+ H + P ++ L ++L D R+TA
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 116 DALC 119
+A+
Sbjct: 311 EAMT 314
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSL--IVRLFGNPTKET 63
+K PE + Y D+W++GC+FA M+ K F G +H L I ++ G
Sbjct: 192 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 251
Query: 64 WPGANYIS-----ELL---HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I E L HS A+ H + P ++ L ++L D R+TA
Sbjct: 252 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 311
Query: 116 DALC 119
+A+
Sbjct: 312 EAMT 315
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSL--IVRLFGNPTKET 63
+K PE + Y D+W++GC+FA M+ K F G +H L I ++ G
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 64 WPGANYIS-----ELL---HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I E L HS A+ H + P ++ L ++L D R+TA
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 116 DALC 119
+A+
Sbjct: 311 EAMT 314
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSL--IVRLFGNPTKET 63
+K PE + Y D+W++GC+FA M+ K F G +H L I ++ G
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 64 WPGANYIS-----ELL---HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I E L HS A+ H + P ++ L ++L D R+TA
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 116 DALC 119
+A+
Sbjct: 311 EAMT 314
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSL--IVRLFGNPTKET 63
+K PE + Y D+W++GC+FA M+ K F G +H L I ++ G
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 64 WPGANYIS-----ELL---HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I E L HS A+ H + P ++ L ++L D R+TA
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 116 DALC 119
+A+
Sbjct: 311 EAMT 314
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSL--IVRLFGNPTKET 63
+K PE + Y D+W++GC+FA M+ K F G +H L I ++ G
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 64 WPGANYIS-----ELL---HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I E L HS A+ H + P ++ L ++L D R+TA
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 116 DALC 119
+A+
Sbjct: 311 EAMT 314
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSL--IVRLFGNPTKET 63
+K PE + Y D+W++GC+FA M+ K F G +H L I ++ G
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 64 WPGANYIS-----ELL---HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I E L HS A+ H + P ++ L ++L D R+TA
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 116 DALC 119
+A+
Sbjct: 311 EAMT 314
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSL--IVRLFGNPTKET 63
+K PE + Y D+W++GC+FA M+ K F G +H L I ++ G
Sbjct: 212 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNA 271
Query: 64 WPGANYIS-----ELL---HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I E L HS A+ H + P ++ L ++L D R+TA
Sbjct: 272 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 331
Query: 116 DALC 119
+A+
Sbjct: 332 EAMT 335
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSL--IVRLFGNPTKET 63
+K PE + Y D+W++GC+FA M+ K F G +H L I ++ G
Sbjct: 193 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 252
Query: 64 WPGANYIS-----ELL---HSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTAN 115
+ I E L HS A+ H + P ++ L ++L D R+TA
Sbjct: 253 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 312
Query: 116 DALC 119
+A+
Sbjct: 313 EAMT 316
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 21/133 (15%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-------CGKKDHLSLIVRLFGN 58
Y++ E I S Y TP D+W+ C+ E+ +G LF +DH++LI+ L G
Sbjct: 243 YRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGK 301
Query: 59 PTKETWPGANYISEL------LHSLPQCEPADLAE------KTHGLEPSG-VELLSQMLC 105
++ Y E L + + +P L E + E +G + L ML
Sbjct: 302 VPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLE 361
Query: 106 LDPDHRVTANDAL 118
L P+ R TA + L
Sbjct: 362 LIPEKRATAAECL 374
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 21/133 (15%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-------CGKKDHLSLIVRLFGN 58
Y++ E I S Y TP D+W+ C+ E+ +G LF +DH++LI+ L G
Sbjct: 259 YRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGK 317
Query: 59 PTKETWPGANYISEL------LHSLPQCEPADLAE------KTHGLEPSG-VELLSQMLC 105
++ Y E L + + +P L E + E +G + L ML
Sbjct: 318 VPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLE 377
Query: 106 LDPDHRVTANDAL 118
L P+ R TA + L
Sbjct: 378 LIPEKRATAAECL 390
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 27/115 (23%)
Query: 5 PY-KAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKET 63
PY APE I S+Y T D+W++G + EMV G+P P + + RL +P
Sbjct: 205 PYWMAPEV-ISRSLYATEVDIWSLGIMVIEMVDGEP--PYFSDSPVQAMKRLRDSP---- 257
Query: 64 WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
P L + +H + P + L +ML DP R TA + L
Sbjct: 258 ------------------PPKL-KNSHKVSPVLRDFLERMLVRDPQERATAQELL 293
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 27/134 (20%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPC-GKKDHLSLIVRLFG-NPTK-- 61
Y+APE I + P DVW++GCI E G LF ++HL+++ R+ G P++
Sbjct: 219 YRAPEV-ILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPIPSRMI 277
Query: 62 -----------------ETWPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQML 104
E Y+ E L + ++ AE+ H L +L+ ML
Sbjct: 278 RKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSE-AEEHHQL----FDLIESML 332
Query: 105 CLDPDHRVTANDAL 118
+P R+T +AL
Sbjct: 333 EYEPAKRLTLGEAL 346
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y++PE + Y D+W++GCI EM +G+PLF + D ++ IV + G P
Sbjct: 205 YRSPEV-LLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHIL 263
Query: 65 PGANYISELLHSLP 78
A + LP
Sbjct: 264 DQAPKARKFFEKLP 277
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y++PE + Y D+W++GCI EM +G+PLF + D ++ IV + G P
Sbjct: 224 YRSPEV-LLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHIL 282
Query: 65 PGANYISELLHSLP 78
A + LP
Sbjct: 283 DQAPKARKFFEKLP 296
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVRLFGNPTKETW 64
Y++PE + Y D+W++GCI EM +G+PLF + D ++ IV + G P
Sbjct: 224 YRSPEV-LLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHIL 282
Query: 65 PGANYISELLHSLP 78
A + LP
Sbjct: 283 DQAPKARKFFEKLP 296
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 52/130 (40%), Gaps = 30/130 (23%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWP 65
Y APE + + Y D WA+GC+ EM++G+ F KK I R
Sbjct: 351 YMAPEV-VKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK----IKR----------- 394
Query: 66 GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK 125
+ L+ +P+ E + P L SQ+LC DP R+ C G S +
Sbjct: 395 --EEVERLVKEVPE-------EYSERFSPQARSLCSQLLCKDPAERLG-----CRGGSAR 440
Query: 126 LLAHAHLYVK 135
+ L+ K
Sbjct: 441 EVKEHPLFKK 450
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 17/129 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFG------- 57
Y+ PE I + P DVW++GCI E G LF + ++HL ++ ++ G
Sbjct: 214 YRPPEV-ILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMI 272
Query: 58 ---NPTKETWPGA----NYISELLHSLPQCEPADLAEKTHGLEPSGV-ELLSQMLCLDPD 109
K + G S+ + C+P LE + +L+ +ML DP
Sbjct: 273 HRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPA 332
Query: 110 HRVTANDAL 118
R+T +AL
Sbjct: 333 QRITLAEAL 341
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 52/130 (40%), Gaps = 30/130 (23%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWP 65
Y APE + + Y D WA+GC+ EM++G+ F KK I R
Sbjct: 351 YMAPEV-VKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK----IKR----------- 394
Query: 66 GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDALCIGTSEK 125
+ L+ +P+ E + P L SQ+LC DP R+ C G S +
Sbjct: 395 --EEVERLVKEVPE-------EYSERFSPQARSLCSQLLCKDPAERLG-----CRGGSAR 440
Query: 126 LLAHAHLYVK 135
+ L+ K
Sbjct: 441 EVKEHPLFKK 450
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 17/129 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFG------- 57
Y+ PE I + P DVW++GCI E G LF + ++HL ++ ++ G
Sbjct: 205 YRPPEV-ILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMI 263
Query: 58 ---NPTKETWPGA----NYISELLHSLPQCEPADLAEKTHGLEPSGV-ELLSQMLCLDPD 109
K + G S+ + C+P LE + +L+ +ML DP
Sbjct: 264 HRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPA 323
Query: 110 HRVTANDAL 118
R+T +AL
Sbjct: 324 QRITLAEAL 332
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 17/129 (13%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFG------- 57
Y+ PE I + P DVW++GCI E G LF + ++HL ++ ++ G
Sbjct: 237 YRPPEV-ILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMI 295
Query: 58 ---NPTKETWPGA----NYISELLHSLPQCEPADLAEKTHGLEPSGV-ELLSQMLCLDPD 109
K + G S+ + C+P LE + +L+ +ML DP
Sbjct: 296 HRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPA 355
Query: 110 HRVTANDAL 118
R+T +AL
Sbjct: 356 QRITLAEAL 364
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF--PCGKKDHLSLIVRLFGNPTKET 63
Y APE +C + D+W++GCI ++ GKP F C K+ ++ + + P
Sbjct: 192 YIAPEV-LCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHIN 250
Query: 64 WPGANYISELLHSLPQCEPA 83
+ I +LH+ P P+
Sbjct: 251 PVASALIRRMLHADPTLRPS 270
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF--PCGKKDHLSLIVRLFGNPTKET 63
Y APE +C + D+W++GCI ++ GKP F C K+ ++ + + P
Sbjct: 208 YIAPEV-LCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHIN 266
Query: 64 WPGANYISELLHSLPQCEPA 83
+ I +LH+ P P+
Sbjct: 267 PVASALIRRMLHADPTLRPS 286
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF--PCGKKDHLSLIVRLFGNPTKET 63
Y APE +C + D+W++GCI ++ GKP F C K+ ++ + + P
Sbjct: 208 YIAPEV-LCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHIN 266
Query: 64 WPGANYISELLHSLPQCEPA 83
+ I +LH+ P P+
Sbjct: 267 PVASALIRRMLHADPTLRPS 286
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF--PCGKKDHLSLIVRLFGNPTKET 63
Y APE +C + D+W++GCI ++ GKP F C K+ ++ + + P
Sbjct: 208 YIAPEV-LCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHIN 266
Query: 64 WPGANYISELLHSLPQCEPA 83
+ I +LH+ P P+
Sbjct: 267 PVASALIRRMLHADPTLRPS 286
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 23 DVWAVGCIFAEMVSGKPLF--PCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC 80
DVW++GCI ++ GKP F C K+ +L + + P A+ I ++L + P
Sbjct: 197 DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTA 256
Query: 81 EPA 83
P
Sbjct: 257 RPT 259
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 23 DVWAVGCIFAEMVSGKPLF--PCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC 80
DVW++GCI ++ GKP F C K+ +L + + P A+ I ++L + P
Sbjct: 199 DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTA 258
Query: 81 EPA 83
P
Sbjct: 259 RPT 261
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 23 DVWAVGCIFAEMVSGKPLF--PCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC 80
DVW++GCI ++ GKP F C K+ +L + + P A+ I ++L + P
Sbjct: 203 DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTA 262
Query: 81 EPA 83
P
Sbjct: 263 RPT 265
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 23 DVWAVGCIFAEMVSGKPLF--PCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC 80
DVW++GCI ++ GKP F C K+ +L + + P A+ I ++L + P
Sbjct: 199 DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTA 258
Query: 81 EPA 83
P
Sbjct: 259 RPT 261
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 23 DVWAVGCIFAEMVSGKPLF--PCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC 80
DVW++GCI ++ GKP F C K+ +L + + P A+ I ++L + P
Sbjct: 221 DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTA 280
Query: 81 EPA 83
P
Sbjct: 281 RPT 283
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 23 DVWAVGCIFAEMVSGKPLF--PCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQC 80
DVW++GCI ++ GKP F C K+ +L + + P A+ I ++L + P
Sbjct: 223 DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTA 282
Query: 81 EPA 83
P
Sbjct: 283 RPT 285
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 34.3 bits (77), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 21/133 (15%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-------CGKKDHLSLIVRLFGN 58
Y++ E I + Y TP D+W+ C+ E+ +G LF +DH++ I+ L G+
Sbjct: 251 YRSIEVLIGAG-YSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGS 309
Query: 59 PTKETWPGANYISEL------LHSLPQCEPAD----LAEKT---HGLEPSGVELLSQMLC 105
+ Y E L + + +P L EK H + L ML
Sbjct: 310 IPRHFALSGKYSREFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLE 369
Query: 106 LDPDHRVTANDAL 118
+ P+ R +A + L
Sbjct: 370 MVPEKRASAGECL 382
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWP 65
++APE T D+W+ G IF ++SG+ F D +L + ++ET
Sbjct: 212 FRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQ 271
Query: 66 GANYISELL---HSLPQCEPADLAEKTHGLEPSGVELLSQM 103
A + + +P + L E+ G++ S +L S +
Sbjct: 272 AAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDI 312
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 33.1 bits (74), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 21/96 (21%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP 82
D+W++G + M++G F G D I+ G+ K T G N+
Sbjct: 207 DIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGS-GKFTLSGGNW------------- 252
Query: 83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ + + +L+S+ML +DP R+TA L
Sbjct: 253 -------NTVSETAKDLVSKMLHVDPHQRLTAKQVL 281
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 33.1 bits (74), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 21/96 (21%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP 82
D+W++G + M++G F G D I+ G+ K T G N+
Sbjct: 207 DIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGS-GKFTLSGGNW------------- 252
Query: 83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ + + +L+S+ML +DP R+TA L
Sbjct: 253 -------NTVSETAKDLVSKMLHVDPHQRLTAKQVL 281
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y+APE I + + D+W+ GC+ AE+ +G LF
Sbjct: 225 YRAPEV-ILNLGWDVSSDMWSFGCVLAELYTGSLLF 259
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELL 74
D+WA+GCI ++V+G P F G + + + I++L + ++ +P A + E L
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKL 268
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELL 74
D+WA+GCI ++V+G P F G + + + I++L + ++ +P A + E L
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKL 268
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 47/129 (36%), Gaps = 21/129 (16%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-------CGKKDHLSLIVRLFGN 58
Y++PE + + + D+W+ C+ E+++G LF DH++ I+ L G
Sbjct: 201 YRSPEV-LLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGE 259
Query: 59 PTKETWPGANYISELLHSLPQCEPAD----------LAEKTHGLEPSGVEL---LSQMLC 105
Y +S L EK + E+ LS ML
Sbjct: 260 LPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQ 319
Query: 106 LDPDHRVTA 114
LDP R A
Sbjct: 320 LDPRKRADA 328
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 25/113 (22%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWP 65
Y +PE + Y P D+WA G I ++ G P P +D L ++ P
Sbjct: 172 YLSPEV-LRKEAYGKPVDIWACGVILYILLVGYP--PFWDEDQHKLYQQIKAGAYDFPSP 228
Query: 66 GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ ++ P L++QML ++P R+TA++AL
Sbjct: 229 EWDTVT----------------------PEAKNLINQMLTINPAKRITAHEAL 259
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 47/129 (36%), Gaps = 21/129 (16%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFP-------CGKKDHLSLIVRLFGN 58
Y++PE + + + D+W+ C+ E+++G LF DH++ I+ L G
Sbjct: 201 YRSPEV-LLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGE 259
Query: 59 PTKETWPGANYISELLHSLPQCEPAD----------LAEKTHGLEPSGVEL---LSQMLC 105
Y +S L EK + E+ LS ML
Sbjct: 260 LPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQ 319
Query: 106 LDPDHRVTA 114
LDP R A
Sbjct: 320 LDPRKRADA 328
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 35/114 (30%)
Query: 15 SSVYMTPH----------DVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETW 64
+++YM P D+W+ G + +++G F + + K T+
Sbjct: 189 TALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQ---------QKATY 239
Query: 65 PGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
NY E C P L P V+LL QML DP+ R +A L
Sbjct: 240 KEPNYAVE-------CRP---------LTPQAVDLLKQMLTKDPERRPSAAQVL 277
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 18 YMTPHDVWAVGCIFAEMVSGKPLF 41
Y D+W++GC EM +GKP F
Sbjct: 202 YGKAADIWSLGCTIIEMATGKPPF 225
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 23/104 (22%)
Query: 5 PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSL------------- 51
PY RI + Y D+W++GC+ EM + + F K + SL
Sbjct: 200 PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLP 259
Query: 52 ----------IVRLFGNPTKETWPGANYISELLHSLPQCEPADL 85
+V + NP E P Y+ ++ + C + L
Sbjct: 260 SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSL 303
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 18 YMTPHDVWAVGCIFAEMVSGKPLF 41
Y D+W++GC EM +GKP F
Sbjct: 188 YGKAADIWSLGCTIIEMATGKPPF 211
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELL 74
D+WA+GCI ++V+G P F G + + I++L + ++ +P A + E L
Sbjct: 198 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 250
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 6 YKAPESRICSSV-YMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIV 53
Y +PE IC + Y D+WA+GC+ E+ + K F G +L L +
Sbjct: 191 YLSPE--ICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI 237
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELL 74
D+WA+GCI ++V+G P F G + + I++L + ++ +P A + E L
Sbjct: 194 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 246
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCG 44
D+WA+GCI ++V+G P F G
Sbjct: 213 DLWALGCIIYQLVAGLPPFRAG 234
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELL 74
D+WA+GCI ++V+G P F G + + I++L + ++ +P A + E L
Sbjct: 193 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 245
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCG 44
D+WA+GCI ++V+G P F G
Sbjct: 213 DLWALGCIIYQLVAGLPPFRAG 234
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELL 74
D+WA+GCI ++V+G P F G + + I++L + ++ +P A + E L
Sbjct: 191 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 243
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELL 74
D+WA+GCI ++V+G P F G + + I++L + ++ +P A + E L
Sbjct: 192 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 244
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELL 74
D+WA+GCI ++V+G P F G + + I++L + ++ +P A + E L
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 268
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELL 74
D+WA+GCI ++V+G P F G + + I++L + ++ +P A + E L
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 266
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELL 74
D+WA+GCI ++V+G P F G + + I++L + ++ +P A + E L
Sbjct: 221 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 273
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCG 44
D+WA+GCI ++V+G P F G
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAG 235
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELL 74
D+WA+GCI ++V+G P F G + + I++L + ++ +P A + E L
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 266
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCG 44
D+WA+GCI ++V+G P F G
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAG 237
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKK 46
D+WA+GCI ++V+G P F G +
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCG 44
D+WA+GCI ++V+G P F G
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAG 235
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKK 46
D+WA+GCI ++V+G P F G +
Sbjct: 217 DLWALGCIIYQLVAGLPPFRAGNE 240
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELL 74
D+WA+GCI ++V+G P F G + + I++L + ++ +P A + E L
Sbjct: 217 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 269
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKKDHL-SLIVRLFGNPTKETWPGANYISELL 74
D+WA+GCI ++V+G P F G + + I++L + ++ +P A + E L
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 268
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKK 46
D+WA+GCI ++V+G P F G +
Sbjct: 219 DLWALGCIIYQLVAGLPPFRAGNE 242
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 30.8 bits (68), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 24/101 (23%)
Query: 18 YMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSL 77
Y P D+WA G I ++ G P P +D L ++ P + ++
Sbjct: 210 YGKPVDIWACGVILYILLVGYP--PFWDEDQHKLYQQIKAGAYDFPSPEWDTVT------ 261
Query: 78 PQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
P L++QML ++P R+TA+ AL
Sbjct: 262 ----------------PEAKNLINQMLTINPAKRITADQAL 286
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 12/67 (17%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRLFGNPTKETWPGANYIS----ELLHSL 77
DVW++GC+F ++ G+P F K+ L+ +V + +++S +L+H L
Sbjct: 194 DVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVL-------ADYEMPSFLSIEAKDLIHQL 246
Query: 78 PQCEPAD 84
+ PAD
Sbjct: 247 LRRNPAD 253
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 29.6 bits (65), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 26/113 (23%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWP 65
Y APE + Y DVW+ G I ++SG P P K+ ++ R+ ET
Sbjct: 189 YIAPE--VLRGTYDEKCDVWSAGVILYILLSGTP--PFYGKNEYDILKRV------ETGK 238
Query: 66 GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
A LPQ + +L+ +ML P R+TA L
Sbjct: 239 YA-------FDLPQWRT---------ISDDAKDLIRKMLTFHPSLRITATQCL 275
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 29.6 bits (65), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 26/113 (23%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWP 65
Y APE + Y DVW+ G I ++SG P P K+ ++ R+ ET
Sbjct: 189 YIAPE--VLRGTYDEKCDVWSAGVILYILLSGTP--PFYGKNEYDILKRV------ETGK 238
Query: 66 GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
A LPQ + +L+ +ML P R+TA L
Sbjct: 239 YA-------FDLPQWRT---------ISDDAKDLIRKMLTFHPSLRITATQCL 275
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 29.6 bits (65), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHL 49
Y APE I Y D WA G + EM++G+P F +D L
Sbjct: 186 YIAPEI-IAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL 228
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 29.3 bits (64), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 29.3 bits (64), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 29.3 bits (64), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 205 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-IISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 205 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 205 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 199 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 29.3 bits (64), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 29.3 bits (64), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 225 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 29.3 bits (64), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 225 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 29.3 bits (64), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 29.3 bits (64), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 29.3 bits (64), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 225 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 29.3 bits (64), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 205 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 29.3 bits (64), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 29.3 bits (64), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 205 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 29.3 bits (64), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 29.3 bits (64), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 29.3 bits (64), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 191 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 29.3 bits (64), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 29.3 bits (64), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 29.3 bits (64), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 205 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 29.3 bits (64), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 205 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 29.3 bits (64), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 205 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 29.3 bits (64), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 29.3 bits (64), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 197 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 205 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 205 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 28.9 bits (63), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 205 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 28.9 bits (63), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 190 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 28.9 bits (63), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 28.9 bits (63), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 197 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 28.9 bits (63), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + EM +G P F
Sbjct: 205 YLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 28.9 bits (63), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 28/115 (24%)
Query: 4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKET 63
Y APE S + DVW++G + ++ G P + ++L ++
Sbjct: 173 LAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG--FLPFDDDNVMALYKKIMRGK---- 226
Query: 64 WPGANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ +P+ L PS + LL QML +DP R++ + L
Sbjct: 227 -----------YDVPKW-----------LSPSSILLLQQMLQVDPKKRISMKNLL 259
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 28.9 bits (63), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK 38
PY APE + P DVW+ G + M++G+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK 38
PY APE + P DVW+ G + M++G+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK 38
PY APE + P DVW+ G + M++G+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK 38
PY APE + P DVW+ G + M++G+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK 38
PY APE + P DVW+ G + M++G+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK 38
PY APE + P DVW+ G + M++G+
Sbjct: 169 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK 38
PY APE + P DVW+ G + M++G+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK 38
PY APE + P DVW+ G + M++G+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK 38
PY APE + P DVW+ G + M++G+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK 38
PY APE + P DVW+ G + M++G+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK 38
PY APE + P DVW+ G + M++G+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK 38
PY APE + P DVW+ G + M++G+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK 38
PY APE + P DVW+ G + M++G+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK 38
PY APE + P DVW+ G + M++G+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK 38
PY APE + P DVW+ G + M++G+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK 38
PY APE + P DVW+ G + M++G+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK 38
PY APE + P DVW+ G + M++G+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK 38
PY APE + P DVW+ G + M++G+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK 38
PY APE + P DVW+ G + M++G+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLS 50
Y +PE SV DV+++GC+ E+++G+P F D ++
Sbjct: 185 YLSPEQARGDSVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPDSVA 228
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK 38
PY APE + P DVW+ G + M++G+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 4 FPYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGK 38
PY APE + P DVW+ G + M++G+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 5 PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKP 39
PY I Y T D+W++G + EM+ G+P
Sbjct: 205 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP 239
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 25/96 (26%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP 82
D+W++G + EMV G+P + F P + + + +LP
Sbjct: 329 DIWSLGIMVIEMVDGEPPY--------------FNEPPLKA------MKMIRDNLP---- 364
Query: 83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ H + PS L ++L DP R TA + L
Sbjct: 365 -PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 399
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 28.5 bits (62), Expect = 1.4, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 26/113 (23%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWP 65
Y APE + Y DVW++G I +++G P F
Sbjct: 204 YIAPE--VLRKKYDEKCDVWSIGVILFILLAGYPPF------------------------ 237
Query: 66 GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
G E+L + + + + + + +L+ QML D R++A AL
Sbjct: 238 GGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQAL 290
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 25/96 (26%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP 82
D+W++G + EMV G+P + F P + + + +LP
Sbjct: 207 DIWSLGIMVIEMVDGEPPY--------------FNEPPLKA------MKMIRDNLPPR-- 244
Query: 83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ H + PS L ++L DP R TA + L
Sbjct: 245 ---LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 277
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVRL-FGNPTKETWPGANYISELLHSLPQC 80
D+W++G + E + GKP F +D I R+ F P T + IS LL P
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQ 247
Query: 81 EP 82
P
Sbjct: 248 RP 249
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 25/96 (26%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP 82
D+W++G + EMV G+P + F P + + + +LP
Sbjct: 252 DIWSLGIMVIEMVDGEPPY--------------FNEPPLKA------MKMIRDNLP---- 287
Query: 83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ H + PS L ++L DP R TA + L
Sbjct: 288 -PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 322
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 25/96 (26%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP 82
D+W++G + EMV G+P + F P + + + +LP
Sbjct: 209 DIWSLGIMVIEMVDGEPPY--------------FNEPPLKA------MKMIRDNLPPR-- 246
Query: 83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ H + PS L ++L DP R TA + L
Sbjct: 247 ---LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 279
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 25/96 (26%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP 82
D+W++G + EMV G+P + F P + + + +LP
Sbjct: 198 DIWSLGIMVIEMVDGEPPY--------------FNEPPLKA------MKMIRDNLPPR-- 235
Query: 83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ H + PS L ++L DP R TA + L
Sbjct: 236 ---LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 268
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 24/96 (25%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP 82
D+WA+G + ++SG L P +D L E L ++ +C+
Sbjct: 232 DMWAIGVLGYVLLSG--LSPFAGEDDL----------------------ETLQNVKRCDW 267
Query: 83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ + P + + +L +P R+T +DAL
Sbjct: 268 EFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDAL 303
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 25/96 (26%)
Query: 23 DVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWPGANYISELLHSLPQCEP 82
D+W++G + EMV G+P + F P + + + +LP
Sbjct: 202 DIWSLGIMVIEMVDGEPPY--------------FNEPPLKA------MKMIRDNLPPR-- 239
Query: 83 ADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ H + PS L ++L DP R TA + L
Sbjct: 240 ---LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 272
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 28.1 bits (61), Expect = 1.7, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 26/113 (23%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRLFGNPTKETWP 65
Y APE + Y DVW+ G I ++SG P P K+ ++ R+ ET
Sbjct: 189 YIAPE--VLRGTYDEKCDVWSAGVILYILLSGTP--PFYGKNEYDILKRV------ET-- 236
Query: 66 GANYISELLHSLPQCEPADLAEKTHGLEPSGVELLSQMLCLDPDHRVTANDAL 118
+ LPQ + +L+ +ML P R+TA L
Sbjct: 237 -----GKYAFDLPQWRT---------ISDDAKDLIRKMLTFHPSLRITATQCL 275
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVS 36
+ APES I +Y T DVW+ G + E+ S
Sbjct: 267 WMAPES-IFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 5 PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVR 54
PY ++ Y D+W++GC+ E+ + P F + L+ +R
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR 229
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y APE I S Y D WA+G + +M +G P F
Sbjct: 204 YLAPEI-ILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 5 PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVR 54
PY ++ Y D+W++GC+ E+ + P F + L+ +R
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR 229
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y +PE SV DV+++GC+ E+++G+P F
Sbjct: 185 YLSPEQARGDSVDAR-SDVYSLGCVLYEVLTGEPPF 219
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 5 PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVR 54
PY ++ Y D+W++GC+ E+ + P F + L+ +R
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR 229
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y +PE SV DV+++GC+ E+++G+P F
Sbjct: 185 YLSPEQARGDSVDAR-SDVYSLGCVLYEVLTGEPPF 219
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y +PE SV DV+++GC+ E+++G+P F
Sbjct: 185 YLSPEQARGDSVDAR-SDVYSLGCVLYEVLTGEPPF 219
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y +PE SV DV+++GC+ E+++G+P F
Sbjct: 185 YLSPEQARGDSVDAR-SDVYSLGCVLYEVLTGEPPF 219
>pdb|1AQB|A Chain A, Retinol-Binding Protein (Rbp) From Pig Plasma
Length = 183
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 85 LAEKTHGLEPSGVELLSQM---LCLDPDHRVTANDALCIGTSEK 125
A HG P +++ Q LCL +R+ ++ C G SE+
Sbjct: 137 FARDPHGFSPEVQKIVRQRQEELCLARQYRIITHNGYCDGKSER 180
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 8 APESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
APE I S Y D WA+G + EM +G P F
Sbjct: 206 APEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y +PE SV DV+++GC+ E+++G+P F
Sbjct: 202 YLSPEQARGDSVDAR-SDVYSLGCVLYEVLTGEPPF 236
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 16 SVYMTPHDVWAVGCIFAEMVS--GKPLFPCG 44
SVY T DVW+ G + E+VS G P CG
Sbjct: 213 SVYTTNSDVWSYGVLLWEIVSLGGTPY--CG 241
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 16 SVYMTPHDVWAVGCIFAEMVS--GKPLFPCG 44
SVY T DVW+ G + E+VS G P CG
Sbjct: 206 SVYTTNSDVWSYGVLLWEIVSLGGTPY--CG 234
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 16 SVYMTPHDVWAVGCIFAEMVS--GKPLFPCG 44
SVY T DVW+ G + E+VS G P CG
Sbjct: 216 SVYTTNSDVWSYGVLLWEIVSLGGTPY--CG 244
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKPLF 41
Y AP + I S Y D WA+G + EM +G P F
Sbjct: 204 YLAP-AIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 5 PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKP 39
PY + Y D+W++G + EM+ G+P
Sbjct: 181 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 215
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 26.9 bits (58), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 5 PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKP 39
PY + Y D+W++G + EM+ G+P
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 26.9 bits (58), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 5 PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKP 39
PY + Y D+W++G + EM+ G+P
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 26.9 bits (58), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 5 PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKP 39
PY + Y D+W++G + EM+ G+P
Sbjct: 181 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 215
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 26.9 bits (58), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKP 39
+ APE I S Y + D+W++G E+ G+P
Sbjct: 170 WMAPEV-IKQSAYDSKADIWSLGITAIELARGEP 202
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 26.9 bits (58), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 5 PYKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKP 39
PY + Y D+W++G + EM+ G+P
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 26.9 bits (58), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKP 39
+ APE I S Y + D+W++G E+ G+P
Sbjct: 170 WMAPEV-IKQSAYDSKADIWSLGITAIELARGEP 202
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 26.9 bits (58), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKP 39
+ APE I S Y + D+W++G E+ G+P
Sbjct: 185 WMAPEV-IKQSAYDSKADIWSLGITAIELARGEP 217
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 6 YKAPESRICSSVYMTPHDVWAVGCIFAEMVSGKP 39
+ APE I S Y + D+W++G E+ G+P
Sbjct: 190 WMAPEV-IKQSAYDSKADIWSLGITAIELARGEP 222
>pdb|3U64|A Chain A, The Crystal Structure Of Tat-T (Tp0956)
pdb|4DI3|A Chain A, Crystal Structure Of A 2:1 Complex Of Treponema Pallidum
Tatp(T) (Tp0957) Bound To Tatt (Tp0956)
pdb|4DI3|B Chain B, Crystal Structure Of A 2:1 Complex Of Treponema Pallidum
Tatp(T) (Tp0957) Bound To Tatt (Tp0956)
pdb|4DI3|C Chain C, Crystal Structure Of A 2:1 Complex Of Treponema Pallidum
Tatp(T) (Tp0957) Bound To Tatt (Tp0956)
pdb|4DI4|A Chain A, Crystal Structure Of A 3:1 Complex Of Treponema Pallidum
Tatp(T) (Tp0957) Bound To Tatt (Tp0956)
Length = 301
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/14 (71%), Positives = 11/14 (78%)
Query: 107 DPDHRVTANDALCI 120
DPDH +T DALCI
Sbjct: 238 DPDHHITYADALCI 251
>pdb|1Z3U|A Chain A, Structure Of The Angiopoietin-2 Recptor Binding Domain
And Identification Of Surfaces Involved In Tie2
Recognition
pdb|1Z3U|B Chain B, Structure Of The Angiopoietin-2 Recptor Binding Domain
And Identification Of Surfaces Involved In Tie2
Recognition
pdb|1Z3U|C Chain C, Structure Of The Angiopoietin-2 Recptor Binding Domain
And Identification Of Surfaces Involved In Tie2
Recognition
pdb|1Z3U|D Chain D, Structure Of The Angiopoietin-2 Recptor Binding Domain
And Identification Of Surfaces Involved In Tie2
Recognition
Length = 217
Score = 26.2 bits (56), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 56 FGNPTKETWPGANYISELLH 75
FGNP+ E W G ++S+L +
Sbjct: 67 FGNPSGEYWLGNEFVSQLTN 86
>pdb|1QAB|E Chain E, The Structure Of Human Retinol Binding Protein With Its
Carrier Protein Transthyretin Reveals Interaction With
The Carboxy Terminus Of Rbp
pdb|1QAB|F Chain F, The Structure Of Human Retinol Binding Protein With Its
Carrier Protein Transthyretin Reveals Interaction With
The Carboxy Terminus Of Rbp
Length = 180
Score = 26.2 bits (56), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 90 HGLEPSGVELLSQM---LCLDPDHRVTANDALCIGTSEKLL 127
+GL P ++++Q LCL +R+ ++ C G SE+ L
Sbjct: 139 NGLPPEAQKIVAQRQEELCLAAQYRLIVHNGYCDGRSERNL 179
>pdb|2GY7|A Chain A, Angiopoietin-2TIE2 COMPLEX CRYSTAL STRUCTURE
Length = 216
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 56 FGNPTKETWPGANYISELLH 75
FGNP+ E W G ++S+L +
Sbjct: 67 FGNPSGEYWLGNEFVSQLTN 86
>pdb|1Z3S|A Chain A, Angiopoietin-2 Receptor Binding Domain
pdb|1Z3S|B Chain B, Angiopoietin-2 Receptor Binding Domain
Length = 217
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 56 FGNPTKETWPGANYISELLH 75
FGNP+ E W G ++S+L +
Sbjct: 67 FGNPSGEYWLGNEFVSQLTN 86
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,656,838
Number of Sequences: 62578
Number of extensions: 180879
Number of successful extensions: 990
Number of sequences better than 100.0: 432
Number of HSP's better than 100.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 472
Number of HSP's gapped (non-prelim): 450
length of query: 142
length of database: 14,973,337
effective HSP length: 89
effective length of query: 53
effective length of database: 9,403,895
effective search space: 498406435
effective search space used: 498406435
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 46 (22.3 bits)