Your job contains 1 sequence.
>048172
MELEITELRLGLPGRDGCDSGLNSSSNNNKNEKKRAFSDICDEANYETNGERKINPTKSQ
VVGWPPVCSYRRKNSFNEKDRVESSKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKL
FGCFGLSEALKDADSSEFVPIYEDKDGDWMLAGDVPWE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048172
(158 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2090141 - symbol:IAA19 "indole-3-acetic acid i... 439 2.2e-41 1
TAIR|locus:2196573 - symbol:IAA5 "indole-3-acetic acid in... 347 1.3e-31 1
TAIR|locus:2011461 - symbol:IAA6 "indole-3-acetic acid 6"... 345 2.0e-31 1
TAIR|locus:2170862 - symbol:ATAUX2-11 "AT5G43700" species... 334 3.0e-30 1
TAIR|locus:2018379 - symbol:SHY2 "SHORT HYPOCOTYL 2" spec... 331 6.2e-30 1
UNIPROTKB|Q75GK0 - symbol:IAA11 "Auxin-responsive protein... 286 2.0e-28 2
UNIPROTKB|Q75GB1 - symbol:IAA17 "Auxin-responsive protein... 281 2.5e-28 2
UNIPROTKB|Q5NB25 - symbol:IAA3 "Auxin-responsive protein ... 273 6.6e-28 2
UNIPROTKB|Q7Y1H8 - symbol:IAA14 "Auxin-responsive protein... 225 2.8e-27 2
UNIPROTKB|P49679 - symbol:IAA4/5 "Auxin-induced protein I... 304 4.5e-27 1
TAIR|locus:2084933 - symbol:IAA16 "indoleacetic acid-indu... 217 3.1e-26 2
UNIPROTKB|Q75GK1 - symbol:IAA12 "Auxin-responsive protein... 206 8.2e-26 2
TAIR|locus:2169955 - symbol:IAA9 "indole-3-acetic acid in... 261 1.0e-25 2
UNIPROTKB|Q5Z749 - symbol:IAA21 "Auxin-responsive protein... 257 2.1e-25 2
TAIR|locus:2119976 - symbol:PAP2 "AT4G29080" species:3702... 243 9.1e-25 2
TAIR|locus:2129910 - symbol:IAA1 "indole-3-acetic acid in... 281 1.2e-24 1
UNIPROTKB|Q6AT33 - symbol:IAA19 "Auxin-responsive protein... 255 3.0e-24 2
TAIR|locus:2094578 - symbol:IAA2 "indole-3-acetic acid in... 274 6.8e-24 1
UNIPROTKB|Q6AT10 - symbol:IAA15 "Auxin-responsive protein... 269 2.3e-23 1
TAIR|locus:2018374 - symbol:AXR3 "AT1G04250" species:3702... 255 7.0e-22 1
TAIR|locus:2094598 - symbol:IAA7 "indole-3-acetic acid 7"... 215 7.6e-22 2
UNIPROTKB|Q6ZL57 - symbol:IAA24 "Auxin-responsive protein... 251 1.9e-21 1
UNIPROTKB|Q5VRD1 - symbol:IAA1 "Auxin-responsive protein ... 241 2.1e-20 1
TAIR|locus:2197838 - symbol:IAA12 "indole-3-acetic acid i... 175 2.4e-19 2
TAIR|locus:2051154 - symbol:IAA13 "auxin-induced protein ... 180 3.1e-19 2
TAIR|locus:2034200 - symbol:IAA15 "indole-3-acetic acid i... 218 5.8e-18 1
UNIPROTKB|Q9LG86 - symbol:IAA2 "Auxin-responsive protein ... 171 1.1e-17 2
TAIR|locus:2129900 - symbol:IAA14 "indole-3-acetic acid i... 211 3.2e-17 1
UNIPROTKB|Q652A1 - symbol:IAA26 "Auxin-responsive protein... 182 4.8e-17 2
TAIR|locus:2139890 - symbol:IAA11 "indole-3-acetic acid i... 162 5.2e-17 2
UNIPROTKB|Q5W670 - symbol:IAA18 "Auxin-responsive protein... 128 5.5e-17 3
UNIPROTKB|Q6H543 - symbol:IAA7 "Auxin-responsive protein ... 123 7.8e-16 3
TAIR|locus:2088324 - symbol:PAP1 "phytochrome-associated ... 154 1.0e-15 2
TAIR|locus:2180557 - symbol:IAA28 "AT5G25890" species:370... 191 4.2e-15 1
UNIPROTKB|Q8LQ74 - symbol:IAA6 "Auxin-responsive protein ... 112 5.0e-15 3
TAIR|locus:2195820 - symbol:IAA18 "indole-3-acetic acid i... 141 2.8e-14 2
TAIR|locus:2090527 - symbol:IAA31 "indole-3-acetic acid i... 181 4.9e-14 1
UNIPROTKB|Q6K846 - symbol:IAA9 "Auxin-responsive protein ... 178 1.0e-13 1
TAIR|locus:2020255 - symbol:IAA10 "indoleacetic acid-indu... 133 4.4e-13 2
TAIR|locus:2041324 - symbol:IAA20 "indole-3-acetic acid i... 163 3.9e-12 1
TAIR|locus:2098023 - symbol:IAA30 "indole-3-acetic acid i... 163 3.9e-12 1
TAIR|locus:2116505 - symbol:IAA29 "indole-3-acetic acid i... 130 8.4e-12 2
UNIPROTKB|Q5VRR0 - symbol:IAA20 "Auxin-responsive protein... 157 1.7e-11 1
TAIR|locus:2196184 - symbol:IAA34 "indole-3-acetic acid i... 136 2.9e-09 1
TAIR|locus:2038701 - symbol:IAA32 "indole-3-acetic acid i... 131 9.7e-09 1
UNIPROTKB|Q6Z5M0 - symbol:IAA8 "Auxin-responsive protein ... 129 1.6e-08 1
TAIR|locus:2175098 - symbol:ARF4 "auxin response factor 4... 124 9.9e-07 1
TAIR|locus:2174562 - symbol:IAA33 "indole-3-acetic acid i... 112 1.0e-06 1
TAIR|locus:2138096 - symbol:ARF9 "auxin response factor 9... 117 4.2e-06 1
TAIR|locus:2076765 - symbol:ARF18 "auxin response factor ... 116 5.0e-06 1
TAIR|locus:2039124 - symbol:ARF11 "auxin response factor ... 115 6.7e-06 1
TAIR|locus:2174013 - symbol:ARF2 "auxin response factor 2... 114 1.3e-05 1
TAIR|locus:2026145 - symbol:ARF12 "auxin response factor ... 111 1.7e-05 1
TAIR|locus:2035454 - symbol:MP "MONOPTEROS" species:3702 ... 112 2.2e-05 1
TAIR|locus:2202205 - symbol:ARF19 "auxin response factor ... 110 4.6e-05 1
TAIR|locus:2009298 - symbol:ARF21 "auxin response factor ... 107 4.7e-05 1
TAIR|locus:2036288 - symbol:ARF22 "auxin response factor ... 106 0.00012 1
TAIR|locus:2206717 - symbol:ARF20 "auxin response factor ... 103 0.00073 1
>TAIR|locus:2090141 [details] [associations]
symbol:IAA19 "indole-3-acetic acid inducible 19"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009630 "gravitropism"
evidence=NAS] [GO:0009638 "phototropism" evidence=NAS] [GO:0009733
"response to auxin stimulus" evidence=RCA;NAS;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080086 "stamen filament development" evidence=IMP] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AB022218 EMBL:AC024081
HOGENOM:HOG000238261 KO:K14484 EMBL:AY088753 EMBL:U49075
IPI:IPI00522744 RefSeq:NP_188173.1 UniGene:At.10479 IntAct:O24409
STRING:O24409 EnsemblPlants:AT3G15540.1 GeneID:820793
KEGG:ath:AT3G15540 GeneFarm:3183 TAIR:At3g15540 eggNOG:NOG325225
InParanoid:O24409 OMA:NCEYVTI PhylomeDB:O24409
ProtClustDB:CLSN2679755 Genevestigator:O24409 GermOnline:AT3G15540
GO:GO:0080086 Uniprot:O24409
Length = 197
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 90/160 (56%), Positives = 105/160 (65%)
Query: 3 LEITELRLGLPGRDGCDSGLXXXXXXXXXXXXRAF-SDICDEANYETNGE-RKINPT--- 57
LEITELRLGLPGRD + + SD C+ + G+ K+N +
Sbjct: 8 LEITELRLGLPGRDVAEKMMKKRAFTEMNMTSSGSNSDQCESGVVSSGGDAEKVNDSPAA 67
Query: 58 KSQVVGWPPVCSYRRKNSFNEKDRVESSKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMAL 117
KSQVVGWPPVCSYR+KNS E + YVKVSMDG P+LRK+DLG QGY DLA AL
Sbjct: 68 KSQVVGWPPVCSYRKKNSCKEASTTKVGLGYVKVSMDGVPYLRKMDLGSSQGYDDLAFAL 127
Query: 118 EKLFGCFGLSEALKDADSSEFVPIYEDKDGDWMLAGDVPW 157
+KLFG G+ ALKD D+ E+V IYEDKDGDWMLAGDVPW
Sbjct: 128 DKLFGFRGIGVALKDGDNCEYVTIYEDKDGDWMLAGDVPW 167
>TAIR|locus:2196573 [details] [associations]
symbol:IAA5 "indole-3-acetic acid inducible 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;RCA;TAS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC013453 HOGENOM:HOG000238261
EMBL:X53436 EMBL:AY150496 EMBL:U18407 IPI:IPI00531814 PIR:G86289
PIR:S12244 PIR:S58492 RefSeq:NP_173011.1 UniGene:At.28674
IntAct:P33078 STRING:P33078 EnsemblPlants:AT1G15580.1 GeneID:838128
KEGG:ath:AT1G15580 GeneFarm:3151 TAIR:At1g15580 eggNOG:NOG305053
OMA:ESECVPI PhylomeDB:P33078 ProtClustDB:CLSN2912676
Genevestigator:P33078 GermOnline:AT1G15580 Uniprot:P33078
Length = 163
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 75/117 (64%), Positives = 86/117 (73%)
Query: 44 ANYETNGERKINPTK-SQVVGWPPVCSYRRKNSFNEKDRVESSKMYVKVSMDGAPFLRKI 102
A+ E + K P K SQVVGWPPVCSYRRKNS +R +SS YVKVS+DGA FLRKI
Sbjct: 36 ASPEVEIDLKCEPAKKSQVVGWPPVCSYRRKNSL---ERTKSS--YVKVSVDGAAFLRKI 90
Query: 103 DLGMHQGYPDLAMALEKLFGCF-GLSEALKDADSSEFVPIYEDKDGDWMLAGDVPWE 158
DL M++ Y DLA AL+ LFGC+ + LK+ SE VPIYEDKDGDWMLAGDVPWE
Sbjct: 91 DLEMYKCYQDLASALQILFGCYINFDDTLKE---SECVPIYEDKDGDWMLAGDVPWE 144
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 40/88 (45%), Positives = 45/88 (51%)
Query: 3 LEITELRLGLPGRDGCDSGLXXXXXXXXXXXXRAFSDICDEANYETNGERKINPTK-SQV 61
LEITELRLGLPG D SG A+ E + K P K SQV
Sbjct: 10 LEITELRLGLPG-DIVVSGESISGKK--------------RASPEVEIDLKCEPAKKSQV 54
Query: 62 VGWPPVCSYRRKNSFNEKDRVESSKMYV 89
VGWPPVCSYRRKNS E+ + K+ V
Sbjct: 55 VGWPPVCSYRRKNSL-ERTKSSYVKVSV 81
>TAIR|locus:2011461 [details] [associations]
symbol:IAA6 "indole-3-acetic acid 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;IMP] [GO:0009704 "de-etiolation"
evidence=IMP] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0009733 GO:GO:0009734 GO:GO:0003700
GO:GO:0006351 EMBL:AC019018 GO:GO:0009704 HOGENOM:HOG000238261
KO:K14484 ProtClustDB:CLSN2679755 EMBL:U18408 EMBL:AF336915
EMBL:AY085353 IPI:IPI00524882 PIR:E96569 PIR:S58493
RefSeq:NP_175692.1 UniGene:At.10795 IntAct:Q38824 STRING:Q38824
EnsemblPlants:AT1G52830.1 GeneID:841717 KEGG:ath:AT1G52830
GeneFarm:3152 TAIR:At1g52830 eggNOG:NOG305797 InParanoid:Q38824
OMA:MFKESCK PhylomeDB:Q38824 Genevestigator:Q38824
GermOnline:AT1G52830 Uniprot:Q38824
Length = 189
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 80/169 (47%), Positives = 97/169 (57%)
Query: 1 MELEITELRLGLPGRDGCDSGLXXXXXXXXXXXXRAFSDICDEANYETNGERKINPT--- 57
+ LEITELRLGLPG D+ R SD+ + +T E + +
Sbjct: 6 LALEITELRLGLPG----DNYSEISVCGSSKKKKRVLSDMMTSSALDTENENSVVSSVED 61
Query: 58 ------KSQVVGWPPVCSYRRKNSFNEKDRVESSKM--YVKVSMDGAPFLRKIDLGMHQG 109
KSQ VGWPPVCSYRRK + NE E+SK YVKVSMDG P++RKIDLG
Sbjct: 62 ESLPVVKSQAVGWPPVCSYRRKKN-NE----EASKAIGYVKVSMDGVPYMRKIDLGSSNS 116
Query: 110 YPDLAMALEKLFGCFGLSEALKDADSSEFVPIYEDKDGDWMLAGDVPWE 158
Y +L LE LFGC G+ A K+ E++ IYEDKD DWML GDVPW+
Sbjct: 117 YINLVTVLENLFGCLGIGVA-KEGKKCEYIIIYEDKDRDWMLVGDVPWQ 164
>TAIR|locus:2170862 [details] [associations]
symbol:ATAUX2-11 "AT5G43700" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=ISS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;ISS;RCA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007020
"microtubule nucleation" evidence=RCA] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] [GO:0003677 "DNA binding"
evidence=ISS] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009536 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB026651
HOGENOM:HOG000238261 ProtClustDB:CLSN2681778 UniGene:At.47260
EMBL:X53435 EMBL:L15450 EMBL:BT005853 IPI:IPI00523552 PIR:S12243
RefSeq:NP_199183.1 IntAct:P33077 STRING:P33077
EnsemblPlants:AT5G43700.1 GeneID:834390 KEGG:ath:AT5G43700
GeneFarm:3150 TAIR:At5g43700 eggNOG:NOG253406 InParanoid:P33077
OMA:KVYKSYP PhylomeDB:P33077 Genevestigator:P33077
GermOnline:AT5G43700 Uniprot:P33077
Length = 186
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 75/161 (46%), Positives = 96/161 (59%)
Query: 1 MELEITELRLGLPGRDGCDSGLXXXXXXXXXXXXRAFSDICDEANYETNGERKI-NPTKS 59
+ L+ TELRLGLPG + S R + E E+ G+ + +P K+
Sbjct: 11 VNLKATELRLGLPGTEETVS--------CGKSNKRVLPE-ATEKEIESTGKTETASPPKA 61
Query: 60 QVVGWPPVCSYRRKNSFNEKDRVESSKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMALEK 119
Q+VGWPPV SYR+ N +K E YVKVSMDGAP+LRKIDL M++ YP+L +LE
Sbjct: 62 QIVGWPPVRSYRKNNVQTKKSESEGQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLEN 121
Query: 120 LFGCFGLSEALKDAD--SSEFVPIYEDKDGDWMLAGDVPWE 158
+F F + E + S+FVP YEDKDGDWML GDVPWE
Sbjct: 122 MFK-FSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWE 161
>TAIR|locus:2018379 [details] [associations]
symbol:SHY2 "SHORT HYPOCOTYL 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009741 "response to brassinosteroid stimulus" evidence=RCA]
[GO:0048527 "lateral root development" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0006417 GO:GO:0009734 GO:GO:0003700 GO:GO:0006351
EMBL:AC000104 HOGENOM:HOG000238261 KO:K14484
ProtClustDB:CLSN2681778 EMBL:U18406 EMBL:AF332393 EMBL:AY064007
IPI:IPI00519738 PIR:S58491 RefSeq:NP_171920.1 UniGene:At.20801
DIP:DIP-31741N IntAct:Q38822 STRING:Q38822 ProMEX:Q38822
DNASU:839570 EnsemblPlants:AT1G04240.1 GeneID:839570
KEGG:ath:AT1G04240 GeneFarm:3143 TAIR:At1g04240 eggNOG:NOG275456
InParanoid:Q38822 OMA:KNESEHE PhylomeDB:Q38822
Genevestigator:Q38822 GermOnline:AT1G04240 Uniprot:Q38822
Length = 189
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 77/164 (46%), Positives = 97/164 (59%)
Query: 1 MELEITELRLGLPGRDG-CDSGLXXXXXXXXXXXXRAFS-DICDEANYETNGERKINPTK 58
+ L+ TELRLGLPG D C++ R S D E + P K
Sbjct: 5 VNLKETELRLGLPGTDNVCEA--KERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPRK 62
Query: 59 SQVVGWPPVCSYRRKNSFNEKDRVE--SSKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMA 116
+Q+VGWPPV SYR+ N ++K+ E +YVKVSMDGAP+LRKIDL ++GY +L A
Sbjct: 63 AQIVGWPPVRSYRKNNIQSKKNESEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELLKA 122
Query: 117 LEKLFGCFGLSEAL-KDA-DSSEFVPIYEDKDGDWMLAGDVPWE 158
LE +F F + E +D S+FVP YEDKDGDWML GDVPWE
Sbjct: 123 LEVMFK-FSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWE 165
>UNIPROTKB|Q75GK0 [details] [associations]
symbol:IAA11 "Auxin-responsive protein IAA11" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009753 GO:GO:0009611 GO:GO:0009734 GO:GO:0006355
GO:GO:0009414 GO:GO:0006351 GO:GO:0009630 GO:GO:0010102
EMBL:AC145379 EMBL:AC145780 EnsemblPlants:LOC_Os03g43400.1
KEGG:dosa:Os03t0633500-00 Gramene:Q75GK0 eggNOG:NOG281606
OMA:PELSMAF Uniprot:Q75GK0
Length = 233
Score = 286 (105.7 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 60/110 (54%), Positives = 76/110 (69%)
Query: 58 KSQVVGWPPVCSYRRKNSFNEKDRVESSKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMAL 117
K+QVVGWPPV S+R KN EK + + VKVSMDGAP+LRKID+ M++ YP+L+MA
Sbjct: 98 KAQVVGWPPVRSFR-KNVLAEKCKAAA---LVKVSMDGAPYLRKIDVAMYKSYPELSMAF 153
Query: 118 EKLFGCF-----GLSEALKDA----DSSEFVPIYEDKDGDWMLAGDVPWE 158
+ +F F G + LK++ D E+VP YEDKDGDWML GDVPWE
Sbjct: 154 QNMFTSFTIGKCGSHQQLKESNKLRDDLEYVPTYEDKDGDWMLVGDVPWE 203
Score = 46 (21.3 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 9/9 (100%), Positives = 9/9 (100%)
Query: 6 TELRLGLPG 14
TELRLGLPG
Sbjct: 9 TELRLGLPG 17
>UNIPROTKB|Q75GB1 [details] [associations]
symbol:IAA17 "Auxin-responsive protein IAA17" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=ISS] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC145396 EMBL:AC145477 EMBL:AK106192
EnsemblPlants:LOC_Os05g14180.1 KEGG:dosa:Os05t0230700-01
Gramene:Q75GB1 eggNOG:NOG266390 OMA:CKKLKIM Uniprot:Q75GB1
Length = 257
Score = 281 (104.0 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 62/115 (53%), Positives = 79/115 (68%)
Query: 58 KSQVVGWPPVCSYRRKN-SFNE----KDRVESSK----MYVKVSMDGAPFLRKIDLGMHQ 108
K+QVVGWPP+ SYR+ + N+ K+ E+ + +YVKVSMDGAP+LRK+DL ++
Sbjct: 114 KAQVVGWPPIRSYRKNTMATNQLKSSKEDAEAKQGQGFLYVKVSMDGAPYLRKVDLKTYK 173
Query: 109 GYPDLAMALEKLF-----GCFGLSEALKDADSSEFVPIYEDKDGDWMLAGDVPWE 158
Y DL+ ALEK+F G GLSE+ KD E+V YEDKDGDWML GDVPWE
Sbjct: 174 NYKDLSTALEKMFIGFTTGKDGLSESRKDG---EYVLTYEDKDGDWMLVGDVPWE 225
Score = 50 (22.7 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 2 ELEITELRLGLPGRDGCD 19
+L+ TELRLGLPG D
Sbjct: 27 DLKGTELRLGLPGSHSPD 44
>UNIPROTKB|Q5NB25 [details] [associations]
symbol:IAA3 "Auxin-responsive protein IAA3" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
eggNOG:NOG266390 EMBL:AP001550 EMBL:AP001859 EMBL:AK104654
RefSeq:NP_001042495.1 UniGene:Os.12733
EnsemblPlants:LOC_Os01g13030.1 EnsemblPlants:LOC_Os01g13030.2
GeneID:4325890 KEGG:dosa:Os01t0231000-01 KEGG:osa:4325890
Gramene:Q5NB25 OMA:CHIVFRS Uniprot:Q5NB25
Length = 263
Score = 273 (101.2 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 55/111 (49%), Positives = 76/111 (68%)
Query: 58 KSQVVGWPPVCSYRRKN-SFNE----KDRVESSK----MYVKVSMDGAPFLRKIDLGMHQ 108
K+QVVGWPP+ SYR+ + N+ K+ V++ + +YVKVSMDGAP+LRK+DL ++
Sbjct: 121 KAQVVGWPPIRSYRKNTMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKTYK 180
Query: 109 GYPDLAMALEKLFGCFGLS-EALKDADSSEFVPIYEDKDGDWMLAGDVPWE 158
Y D+++ LEK+F F E ++ E+V YEDKDGDWML GDVPWE
Sbjct: 181 NYKDMSLGLEKMFIGFSTGKEGAENQKDGEYVLTYEDKDGDWMLVGDVPWE 231
Score = 54 (24.1 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 11/19 (57%), Positives = 15/19 (78%)
Query: 1 MELEITELRLGLPGRDGCD 19
++L+ TELRLGLPG + D
Sbjct: 32 VDLKGTELRLGLPGSESPD 50
>UNIPROTKB|Q7Y1H8 [details] [associations]
symbol:IAA14 "Auxin-responsive protein IAA14" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:AC093713
EMBL:AK059619 KEGG:dosa:Os03t0797800-01 Gramene:Q7Y1H8
eggNOG:NOG284674 Uniprot:Q7Y1H8
Length = 195
Score = 225 (84.3 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 47/84 (55%), Positives = 60/84 (71%)
Query: 78 EKDRVESSK---MYVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCFGLSEALKDAD 134
E D+ +K +YVKVSMDGAP+LRK+DL M+ GY +L AL+ LFGCF ++A A
Sbjct: 97 ETDQGRKNKGGGLYVKVSMDGAPYLRKVDLRMYGGYRELRDALDALFGCFS-ADA--SAS 153
Query: 135 SSEFVPIYEDKDGDWMLAGDVPWE 158
++ F YEDKDGD MLAGDVPW+
Sbjct: 154 AAHFAVAYEDKDGDLMLAGDVPWD 177
Score = 96 (38.9 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 27/68 (39%), Positives = 30/68 (44%)
Query: 7 ELRLGLPGRDGCDS-GLXXXXXXXXXXXXRAFSDICDEANYETNGERKINP-TKSQVVGW 64
ELRLGLPG G D A C + E +P +K QVVGW
Sbjct: 9 ELRLGLPGSGGGDGVAAKKRRSASSTVKSEASGTACCGGAGARDVEDGASPASKVQVVGW 68
Query: 65 PPVCSYRR 72
PPV SYRR
Sbjct: 69 PPVGSYRR 76
>UNIPROTKB|P49679 [details] [associations]
symbol:IAA4/5 "Auxin-induced protein IAA4" species:3888
"Pisum sativum" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:X68215
EMBL:X68216 PIR:S39075 IntAct:P49679 Uniprot:P49679
Length = 189
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 72/169 (42%), Positives = 95/169 (56%)
Query: 1 MELEITELRLGLPG-RDGCDSGLXXXXXXXXXXXXRAFSDICDEA---NYETNGERKIN- 55
ME + TELRLGLPG + + + R +E+ + TN E +
Sbjct: 1 MEFKATELRLGLPGITEEEEKKIIHGSSVVKNNNKRQLPQTSEESVSISKVTNDEHIVES 60
Query: 56 -----PTKSQVVGWPPVCSYRRKNSFNEKDRVESSKMYVKVSMDGAPFLRKIDLGMHQGY 110
P K+++VGWPP+ SYR KNS +E D ++VKVSMDGAP+LRKIDL ++ GY
Sbjct: 61 SSAAPPAKAKIVGWPPIRSYR-KNSLHEAD---VGGIFVKVSMDGAPYLRKIDLRVYGGY 116
Query: 111 PDLAMALEKLFGC-FGLSEALKDADSSEFVPIYEDKDGDWMLAGDVPWE 158
+L ALE +F G + SE+ P YEDKDGDWML GDVPW+
Sbjct: 117 SELLKALETMFKLTIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWD 165
>TAIR|locus:2084933 [details] [associations]
symbol:IAA16 "indoleacetic acid-induced protein 16"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006970 "response to osmotic stress"
evidence=RCA] [GO:0010583 "response to cyclopentenone"
evidence=RCA] [GO:0046686 "response to cadmium ion" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009733 GO:GO:0006417 GO:GO:0009734 GO:GO:0003700
GO:GO:0006351 GO:GO:0009416 EMBL:AC011437 HOGENOM:HOG000238261
eggNOG:NOG281606 EMBL:U49072 EMBL:AF332400 EMBL:AF375420
EMBL:BT000857 EMBL:AY087195 IPI:IPI00530628 RefSeq:NP_187124.1
UniGene:At.24121 IntAct:O24407 STRING:O24407 PRIDE:O24407
DNASU:819633 EnsemblPlants:AT3G04730.1 GeneID:819633
KEGG:ath:AT3G04730 GeneFarm:3175 TAIR:At3g04730 InParanoid:O24407
OMA:FRKNVMS PhylomeDB:O24407 ProtClustDB:CLSN2914703
Genevestigator:O24407 GermOnline:AT3G04730 Uniprot:O24407
Length = 236
Score = 217 (81.4 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 45/85 (52%), Positives = 57/85 (67%)
Query: 88 YVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCFGLS----EALKD----------A 133
YVKVSMDGAP+LRKIDL +++ Y DL+ AL K+F F + + +KD
Sbjct: 120 YVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESKLIDLL 179
Query: 134 DSSEFVPIYEDKDGDWMLAGDVPWE 158
+ S++VP YEDKDGDWML GDVPWE
Sbjct: 180 NGSDYVPTYEDKDGDWMLVGDVPWE 204
Score = 94 (38.1 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 28/88 (31%), Positives = 42/88 (47%)
Query: 1 MELEITELRLGLPGRD------GCDSGLXXXXXXXXXXXXRAFS--DICDEANYETNGER 52
+ E TELRLGLPG + G ++G + + D + + E E+
Sbjct: 2 INFEATELRLGLPGGNHGGEMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLENMKEK 61
Query: 53 KINP-TKSQVVGWPPVCSYRRKNSFNEK 79
+ P K+QVVGWPPV S+R+ +K
Sbjct: 62 VVKPPAKAQVVGWPPVRSFRKNVMSGQK 89
>UNIPROTKB|Q75GK1 [details] [associations]
symbol:IAA12 "Auxin-responsive protein IAA12" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC145379 EMBL:AK073044 RefSeq:NP_001050714.1 UniGene:Os.9945
STRING:Q75GK1 EnsemblPlants:LOC_Os03g43410.1 GeneID:4333512
KEGG:dosa:Os03t0633800-01 KEGG:osa:4333512 Gramene:Q75GK1
eggNOG:NOG272839 OMA:TCKKLRI ProtClustDB:CLSN2694101 Uniprot:Q75GK1
Length = 226
Score = 206 (77.6 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
Identities = 43/70 (61%), Positives = 52/70 (74%)
Query: 89 VKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCFGLSEALKDADSSEFVPIYEDKDGD 148
VKVSMDGAP+LRKIDL M++GY +L ALE +F CF S A A+ SEF Y+DKDGD
Sbjct: 131 VKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCF--SGAADGANPSEFAITYQDKDGD 188
Query: 149 WMLAGDVPWE 158
ML GDVP++
Sbjct: 189 LMLVGDVPFD 198
Score = 101 (40.6 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
Identities = 32/91 (35%), Positives = 43/91 (47%)
Query: 3 LEITELRLGLPGR-DGCDSGLXXXXXXXXXXXXRAFSDICDEANYETNGERKINPTKSQV 61
++ TELRLGLPG D S A + D+ ++ E K+QV
Sbjct: 13 IKATELRLGLPGTADDLPSTPRGKKRAAAAEDNNANAAAADDDEHDAV-EAAPPVAKAQV 71
Query: 62 VGWPPVCSYRRKNSFNEKDRVESSKMYVKVS 92
VGWPPV SYR K+ F ++ +SK VS
Sbjct: 72 VGWPPVRSYR-KSCFQQQSAA-ASKSKAAVS 100
>TAIR|locus:2169955 [details] [associations]
symbol:IAA9 "indole-3-acetic acid inducible 9"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0009734 "auxin mediated signaling
pathway" evidence=TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0009616 "virus induced gene
silencing" evidence=RCA] [GO:0010050 "vegetative phase change"
evidence=RCA] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB010075 EMBL:AL021684 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000238261 OMA:CKKLKIM
EMBL:U18411 EMBL:AF334715 EMBL:AY087089 IPI:IPI00545394 PIR:T05902
RefSeq:NP_851275.1 UniGene:At.20107 IntAct:Q38827 STRING:Q38827
PRIDE:Q38827 EnsemblPlants:AT5G65670.1 GeneID:836693
KEGG:ath:AT5G65670 GeneFarm:3156 TAIR:At5g65670 eggNOG:NOG294213
InParanoid:Q38827 PhylomeDB:Q38827 ProtClustDB:CLSN2683754
Genevestigator:Q38827 Uniprot:Q38827
Length = 338
Score = 261 (96.9 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 64/134 (47%), Positives = 78/134 (58%)
Query: 48 TNGERKINPTKSQVVGWPPVCSYRR-------KNSFNEKDRVESSKMYVKVSMDGAPFLR 100
TN K+Q+VGWPPV SYR+ KNS R S ++VKVSMDGAP+LR
Sbjct: 171 TNNSSSPPAAKAQIVGWPPVRSYRKNTLATTCKNSDEVDGRPGSGALFVKVSMDGAPYLR 230
Query: 101 KIDLGMHQGYPDLAMALEKLF-----------GCFG---LSEA-LKDA-DSSEFVPIYED 144
K+DL + Y +L+ ALEK+F G G LSE LKD + ++V YED
Sbjct: 231 KVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYED 290
Query: 145 KDGDWMLAGDVPWE 158
KDGDWML GDVPWE
Sbjct: 291 KDGDWMLVGDVPWE 304
Score = 45 (20.9 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 1 MELEITELRLGLPG 14
+ L+ TEL LGLPG
Sbjct: 61 ISLKATELTLGLPG 74
>UNIPROTKB|Q5Z749 [details] [associations]
symbol:IAA21 "Auxin-responsive protein IAA21" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0005737
GO:GO:0009733 GO:GO:0009734 GO:GO:0006355 GO:GO:0006351
HOGENOM:HOG000238261 eggNOG:NOG266390 EMBL:AP004784 EMBL:AK121989
RefSeq:NP_001057554.1 UniGene:Os.7687 PRIDE:Q5Z749
EnsemblPlants:LOC_Os06g22870.1 GeneID:4340939
KEGG:dosa:Os06t0335500-01 KEGG:osa:4340939 Gramene:Q5Z749
OMA:RKNTMAM ProtClustDB:CLSN2691250 Uniprot:Q5Z749
Length = 266
Score = 257 (95.5 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 64/144 (44%), Positives = 84/144 (58%)
Query: 43 EANYETNGERKINPT-KSQVVGWPPVCSYRRKN------SFNEKDRVESSK------MYV 89
EA E ++ P K+QVVGWPP+ SYR+ + KD E+ + +YV
Sbjct: 90 EAEEEEEKKKAQAPAAKAQVVGWPPIRSYRKNTMAMSQPALKGKDDGEAKQAPASGCLYV 149
Query: 90 KVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCF--------------GLSEA-LKDA- 133
KVSMDGAP+LRK+DL M++ Y +L++ALEK+F CF GLS+ L D
Sbjct: 150 KVSMDGAPYLRKVDLKMYKNYKELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDLK 209
Query: 134 DSSEFVPIYEDKDGDWMLAGDVPW 157
+ +E V YEDKD DWML GDVPW
Sbjct: 210 NGTELVLTYEDKDEDWMLVGDVPW 233
Score = 46 (21.3 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 9/9 (100%), Positives = 9/9 (100%)
Query: 6 TELRLGLPG 14
TELRLGLPG
Sbjct: 22 TELRLGLPG 30
>TAIR|locus:2119976 [details] [associations]
symbol:PAP2 "AT4G29080" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=ISS] [GO:0009733 "response to auxin
stimulus" evidence=ISS;TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=RCA] [GO:0048438 "floral whorl
development" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 GO:GO:0009536 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734 EMBL:AL078470
EMBL:AL161574 GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000238261
eggNOG:NOG266390 EMBL:AF087936 EMBL:AJ458326 EMBL:AF332402
EMBL:AY053404 EMBL:AY133516 IPI:IPI00539897 PIR:T08963
RefSeq:NP_194637.1 UniGene:At.3406 IntAct:Q9ZSY8 STRING:Q9ZSY8
EnsemblPlants:AT4G29080.1 GeneID:829029 KEGG:ath:AT4G29080
GeneFarm:3186 TAIR:At4g29080 InParanoid:Q9ZSY8 OMA:HGGSANW
PhylomeDB:Q9ZSY8 ProtClustDB:CLSN2916037 Genevestigator:Q9ZSY8
GermOnline:AT4G29080 Uniprot:Q9ZSY8
Length = 305
Score = 243 (90.6 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
Identities = 61/134 (45%), Positives = 79/134 (58%)
Query: 57 TKSQVVGWPPVCSYRRK------------NSFNEKDRVESSK----MYVKVSMDGAPFLR 100
+K+QVVGWPP+ S+R+ NS E+ +S +YVKVSM+GAP+LR
Sbjct: 140 SKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLR 199
Query: 101 KIDLGMHQGYPDLAMALEKLFGCF--------------GLSEA-LKDA-DSSEFVPIYED 144
KIDL ++ Y +L+ ALEK+F CF GL+E+ L D SE+V YED
Sbjct: 200 KIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYED 259
Query: 145 KDGDWMLAGDVPWE 158
KD DWML GDVPWE
Sbjct: 260 KDSDWMLVGDVPWE 273
Score = 54 (24.1 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
Identities = 16/50 (32%), Positives = 22/50 (44%)
Query: 1 MELEITELRLGLPGRDG---CDSGLXXXXXXX--XXXXXRAFSDICDEAN 45
+ + TELRLGLPG + DS R FSD +++N
Sbjct: 38 LNFKATELRLGLPGSESPERVDSRFLALNKSSCPVSGAKRVFSDAINDSN 87
>TAIR|locus:2129910 [details] [associations]
symbol:IAA1 "indole-3-acetic acid inducible" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009733 "response to auxin stimulus"
evidence=IEP;RCA] [GO:0009741 "response to brassinosteroid
stimulus" evidence=RCA] [GO:0010583 "response to cyclopentenone"
evidence=RCA] [GO:0048527 "lateral root development" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733
GO:GO:0006417 GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 EMBL:Z97336
EMBL:AL161539 HOGENOM:HOG000238261 EMBL:L15448 EMBL:AY133714
IPI:IPI00539077 PIR:A71408 RefSeq:NP_193192.1 UniGene:At.43941
IntAct:P49677 STRING:P49677 DNASU:827103 EnsemblPlants:AT4G14560.1
GeneID:827103 KEGG:ath:AT4G14560 GeneFarm:3140 TAIR:At4g14560
eggNOG:NOG329801 InParanoid:P49677 OMA:CQKLRIM PhylomeDB:P49677
ProtClustDB:CLSN2681778 Genevestigator:P49677 GermOnline:AT4G14560
Uniprot:P49677
Length = 168
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 61/116 (52%), Positives = 75/116 (64%)
Query: 45 NYETNGERKINPTKSQVVGWPPVCSYRRKNSFNEKDRVESSKMYVKVSMDGAPFLRKIDL 104
N ++ E P K+Q+VGWPPV S R+ N N K+ YVKVSMDGAP+LRKIDL
Sbjct: 40 NNDSTEESAPPPAKTQIVGWPPVRSNRKNN--NNKN-----VSYVKVSMDGAPYLRKIDL 92
Query: 105 GMHQGYPDLAMALEKLFGCFGLSE--ALKDADSSEFVPIYEDKDGDWMLAGDVPWE 158
M++ YP+L ALE +F F + E + S FVP YEDKDGDWML GDVPW+
Sbjct: 93 KMYKNYPELLKALENMFK-FTVGEYSEREGYKGSGFVPTYEDKDGDWMLVGDVPWD 147
>UNIPROTKB|Q6AT33 [details] [associations]
symbol:IAA19 "Auxin-responsive protein IAA19" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:AC144735
EMBL:AK061439 RefSeq:NP_001056300.1 UniGene:Os.8928
EnsemblPlants:LOC_Os05g48590.1 GeneID:4339588
KEGG:dosa:Os05t0559400-01 KEGG:osa:4339588 Gramene:Q6AT33
eggNOG:NOG268205 OMA:RKLRIMR ProtClustDB:CLSN2691691 Uniprot:Q6AT33
Length = 281
Score = 255 (94.8 bits), Expect = 3.0e-24, Sum P(2) = 3.0e-24
Identities = 60/125 (48%), Positives = 76/125 (60%)
Query: 58 KSQVVGWPPVCSYRR--------KNSFNEKDRVESSKMYVKVSMDGAPFLRKIDLGMHQG 109
K+QVVGWPPV SYR+ K ++ + E YVKVSMDGAP+LRK+DL +
Sbjct: 125 KAQVVGWPPVRSYRKNTLAASATKTKGEDQGKSEVGCCYVKVSMDGAPYLRKVDLKTYSS 184
Query: 110 YPDLAMALEKLFGCF--GLSEA--------LKD---ADS---SEFVPIYEDKDGDWMLAG 153
Y DL++ALEK+F CF G S + L D AD+ E+V YEDKD DWML G
Sbjct: 185 YEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADWMLVG 244
Query: 154 DVPWE 158
D+PW+
Sbjct: 245 DLPWD 249
Score = 37 (18.1 bits), Expect = 3.0e-24, Sum P(2) = 3.0e-24
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 8 LRLGLPGRD 16
LRLGLPG +
Sbjct: 40 LRLGLPGSE 48
>TAIR|locus:2094578 [details] [associations]
symbol:IAA2 "indole-3-acetic acid inducible 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009733 "response to auxin stimulus"
evidence=IEP;RCA] [GO:0010583 "response to cyclopentenone"
evidence=RCA] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003700
GO:GO:0006351 EMBL:AB026655 HOGENOM:HOG000238261
ProtClustDB:CLSN2681778 EMBL:L15449 EMBL:AF027157 EMBL:AF332392
IPI:IPI00527263 RefSeq:NP_188943.1 UniGene:At.23539 IntAct:P49678
STRING:P49678 EnsemblPlants:AT3G23030.1 GeneID:821877
KEGG:ath:AT3G23030 GeneFarm:3142 TAIR:At3g23030 eggNOG:NOG239673
InParanoid:P49678 OMA:CEREGYK PhylomeDB:P49678
Genevestigator:P49678 GermOnline:AT3G23030 Uniprot:P49678
Length = 174
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 60/114 (52%), Positives = 72/114 (63%)
Query: 47 ETNGERKINP-TKSQVVGWPPVCSYRRKNSFNEKDRVESSKMYVKVSMDGAPFLRKIDLG 105
ET E + P TK+Q+VGWPPV S R+ N+ S YVKVSMDGAP+LRKIDL
Sbjct: 46 ETRDEEESTPPTKTQIVGWPPVRSSRKNNN---------SVSYVKVSMDGAPYLRKIDLK 96
Query: 106 MHQGYPDLAMALEKLFGCF-GLSEALKDADSSEFVPIYEDKDGDWMLAGDVPWE 158
++ YP+L ALE +F G + S FVP YEDKDGDWML GDVPW+
Sbjct: 97 TYKNYPELLKALENMFKVMIGEYCEREGYKGSGFVPTYEDKDGDWMLVGDVPWD 150
>UNIPROTKB|Q6AT10 [details] [associations]
symbol:IAA15 "Auxin-responsive protein IAA15" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC144738 EMBL:AK061796 RefSeq:NP_001054800.1 UniGene:Os.4822
EnsemblPlants:LOC_Os05g08570.2 GeneID:4337971
KEGG:dosa:Os05t0178600-01 KEGG:osa:4337971 Gramene:Q6AT10
eggNOG:NOG312815 ProtClustDB:CLSN2691128 Uniprot:Q6AT10
Length = 212
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 72/172 (41%), Positives = 95/172 (55%)
Query: 1 MELEITELRLGLPGRDGCDSGLXXXXXXXXXXX---XRAFSDICDEANY--ETNGERKIN 55
++ E T L L LPG S RA + D N T E +
Sbjct: 18 LDFEDTALTLRLPGSSSSSSSSSSSSSSSSPSEPDRKRASATDDDPDNRLGSTATESPPS 77
Query: 56 PTKSQVVGWPPVCSYRRKNSFNEKDRVESSKM-YVKVSMDGAPFLRKIDLGMHQGYPDLA 114
P K++VVGWPPV ++R KN+ SSK +VKV++DGAP+LRK+DL ++GY L
Sbjct: 78 P-KARVVGWPPVRAFR-KNALAALAAASSSKAKFVKVAVDGAPYLRKVDLEAYRGYDQLL 135
Query: 115 MALE-KLFGCFGL----SEALK--DADS-SEFVPIYEDKDGDWMLAGDVPWE 158
AL+ K F F + +E +K DA S +E+VP YEDKDGDWML GDVPW+
Sbjct: 136 AALQDKFFSHFTIRKLGNEEMKLVDAVSGNEYVPTYEDKDGDWMLVGDVPWK 187
>TAIR|locus:2018374 [details] [associations]
symbol:AXR3 "AT1G04250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0009734 "auxin mediated signaling
pathway" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009733 "response to auxin stimulus" evidence=IEP;IMP;TAS]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009536
GO:GO:0006417 GO:GO:0009734 GO:GO:0003700 GO:GO:0006351
GO:GO:0009416 EMBL:AC000104 HOGENOM:HOG000238261 KO:K14484
EMBL:U49073 EMBL:AF040631 EMBL:AF040632 EMBL:AF336916 EMBL:AY070094
EMBL:AY117183 EMBL:AY087284 IPI:IPI00548274 PIR:H86173
RefSeq:NP_171921.1 UniGene:At.20252 IntAct:P93830 STRING:P93830
DNASU:839568 EnsemblPlants:AT1G04250.1 GeneID:839568
KEGG:ath:AT1G04250 GeneFarm:3180 TAIR:At1g04250 eggNOG:NOG250798
InParanoid:P93830 OMA:KEGSTTH PhylomeDB:P93830
ProtClustDB:CLSN2914376 Genevestigator:P93830 GermOnline:AT1G04250
Uniprot:P93830
Length = 229
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 59/120 (49%), Positives = 73/120 (60%)
Query: 56 PTKSQVVGWPPVCSYRRKN---SFNEKDRVESSKMYVKVSMDGAPFLRKIDLGMHQGYPD 112
P K+QVVGWPPV SYR KN S + + +VKVSMDGAP+LRKIDL M++ Y +
Sbjct: 78 PAKAQVVGWPPVRSYR-KNVMVSCQKSSGGPEAAAFVKVSMDGAPYLRKIDLRMYKSYDE 136
Query: 113 LAMALEKLFGCF-----GLSEALKD----------ADSSEFVPIYEDKDGDWMLAGDVPW 157
L+ AL +F F G E + D +S ++VP YEDKDGDWML GDVPW
Sbjct: 137 LSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSWDYVPSYEDKDGDWMLVGDVPW 196
>TAIR|locus:2094598 [details] [associations]
symbol:IAA7 "indole-3-acetic acid 7" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009733 "response to auxin stimulus"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IEP]
[GO:0009630 "gravitropism" evidence=IMP] [GO:0000271
"polysaccharide biosynthetic process" evidence=RCA] [GO:0007389
"pattern specification process" evidence=RCA] [GO:0008361
"regulation of cell size" evidence=RCA] [GO:0009269 "response to
desiccation" evidence=RCA] [GO:0009409 "response to cold"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
[GO:0009825 "multidimensional cell growth" evidence=RCA]
[GO:0009926 "auxin polar transport" evidence=RCA] [GO:0009932 "cell
tip growth" evidence=RCA] [GO:0010015 "root morphogenesis"
evidence=RCA] [GO:0010817 "regulation of hormone levels"
evidence=RCA] [GO:0040007 "growth" evidence=RCA] [GO:0043481
"anthocyanin accumulation in tissues in response to UV light"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=IMP] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0009753 GO:GO:0009611 GO:GO:0006417 GO:GO:0009734
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 GO:GO:0009630
GO:GO:0009416 EMBL:AB026655 HOGENOM:HOG000238261 eggNOG:NOG281606
KO:K14484 EMBL:U18409 EMBL:AF332395 EMBL:AY054651 EMBL:AY072461
EMBL:AY087765 IPI:IPI00517741 PIR:S58494 RefSeq:NP_188945.1
UniGene:At.22260 UniGene:At.67783 PDB:2P1N PDB:2P1O PDB:2P1Q
PDBsum:2P1N PDBsum:2P1O PDBsum:2P1Q DIP:DIP-33345N IntAct:Q38825
STRING:Q38825 PaxDb:Q38825 PRIDE:Q38825 DNASU:821879
EnsemblPlants:AT3G23050.1 GeneID:821879 KEGG:ath:AT3G23050
GeneFarm:3154 TAIR:At3g23050 InParanoid:Q38825 OMA:NESKLMN
PhylomeDB:Q38825 ProtClustDB:CLSN2684190 EvolutionaryTrace:Q38825
Genevestigator:Q38825 Uniprot:Q38825
Length = 243
Score = 215 (80.7 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 45/84 (53%), Positives = 58/84 (69%)
Query: 89 VKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCF--------GLSEALKDA------D 134
VKVSMDGAP+LRK+DL M++ Y DL+ AL K+F F G+ + + ++ +
Sbjct: 127 VKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKLMNLLN 186
Query: 135 SSEFVPIYEDKDGDWMLAGDVPWE 158
SSE+VP YEDKDGDWML GDVPWE
Sbjct: 187 SSEYVPSYEDKDGDWMLVGDVPWE 210
Score = 158 (60.7 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 38/85 (44%), Positives = 49/85 (57%)
Query: 56 PTKSQVVGWPPVCSYRRKNSFNEK-----DRVESSKM-----------YVKVSMDGAPFL 99
P K+QVVGWPPV +YR+ +K + S K VKVSMDGAP+L
Sbjct: 78 PAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGAGLVKVSMDGAPYL 137
Query: 100 RKIDLGMHQGYPDLAMALEKLFGCF 124
RK+DL M++ Y DL+ AL K+F F
Sbjct: 138 RKVDLKMYKSYQDLSDALAKMFSSF 162
Score = 54 (24.1 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 1 MELEITELRLGLPGRDGCDSGLXXXXXXXXXXXXRAFSDICD-EANYETNGERKIN 55
M L+ TEL LGLPG G ++ R FS+ D N ++N E ++
Sbjct: 6 MNLKATELCLGLPG--GAEA--VESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVD 57
>UNIPROTKB|Q6ZL57 [details] [associations]
symbol:IAA24 "Auxin-responsive protein IAA24" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=ISS] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:AP003835
EMBL:AK103483 RefSeq:NP_001059051.1 UniGene:Os.8622
EnsemblPlants:LOC_Os07g08460.1 GeneID:4342573
KEGG:dosa:Os07t0182400-01 KEGG:osa:4342573 Gramene:Q6ZL57
eggNOG:NOG284204 OMA:QHAIAYE ProtClustDB:CLSN2694400 Uniprot:Q6ZL57
Length = 219
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 58/120 (48%), Positives = 73/120 (60%)
Query: 56 PTKSQVVGWPPVCSYRRKNSFNE----------------KDRVESSKMYVKVSMDGAPFL 99
P K+QVVGWPPV +YRR N+F++ K + + +YVKVSMDGAP+L
Sbjct: 84 PAKAQVVGWPPVRAYRR-NTFHQAAAAAAATKKGGDEKQKQQQQGGGLYVKVSMDGAPYL 142
Query: 100 RKIDLGMHQGYPDLAMALEKLFG-CFGLSEALKDADSSEFVPIYEDKDGDWMLAGDVPWE 158
RK+DL M +GY +L AL+ LF CF + A +F YEDKDGD ML GDVPWE
Sbjct: 143 RKVDLKMCKGYRELREALDLLFTKCFSAT-ASDGCSDGQFAIAYEDKDGDLMLVGDVPWE 201
>UNIPROTKB|Q5VRD1 [details] [associations]
symbol:IAA1 "Auxin-responsive protein IAA1" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
ProtClustDB:CLSN2691128 EMBL:AP002524 EMBL:AP002903 EMBL:AK109373
RefSeq:NP_001042192.1 UniGene:Os.9069
EnsemblPlants:LOC_Os01g08320.1 GeneID:4323871
KEGG:dosa:Os01t0178500-02 Gramene:Q5VRD1 eggNOG:NOG252529
OMA:FADDERK Uniprot:Q5VRD1
Length = 199
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 64/166 (38%), Positives = 87/166 (52%)
Query: 1 MELEITELRLGLPGRDGCDSGLXXXXXXXXXXXXRAFSDICDEANYETNGERKINPTKSQ 60
++ E T L L LPG + A +D D ++ K++
Sbjct: 18 LDFEDTALTLRLPGSLAAAAAPDPDRKRSSPSSSDA-ADAADNSSPLAAAADAPPAPKAR 76
Query: 61 VVGWPPVCSYRRKNSFNEKDRVESSKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMALE-K 119
VVGWPPV S+R KN+ K +VKV++DGAP+LRK+DL + GY L AL+ K
Sbjct: 77 VVGWPPVRSFR-KNALAAK--------FVKVAVDGAPYLRKVDLEAYSGYDQLLRALQDK 127
Query: 120 LFGCFGLSE------ALKDA-DSSEFVPIYEDKDGDWMLAGDVPWE 158
F F + + L DA + +E+VP YEDKDGDWML GDVPW+
Sbjct: 128 FFSHFTIRKFADDERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWK 173
>TAIR|locus:2197838 [details] [associations]
symbol:IAA12 "indole-3-acetic acid inducible 12"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009733 "response to auxin
stimulus" evidence=IGI] [GO:0009880 "embryonic pattern
specification" evidence=IMP] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010051 "xylem and phloem
pattern formation" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0048364 "root
development" evidence=IMP] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
GO:GO:0010051 EMBL:AC002376 GO:GO:0009880 HOGENOM:HOG000238261
EMBL:U18414 EMBL:AF332398 EMBL:AY065240 EMBL:AY096535 EMBL:AY088042
IPI:IPI00527949 PIR:S58498 RefSeq:NP_171949.1 UniGene:At.10466
UniGene:At.10797 IntAct:Q38830 STRING:Q38830 PRIDE:Q38830
DNASU:839495 EnsemblPlants:AT1G04550.2 GeneID:839495
KEGG:ath:AT1G04550 GeneFarm:3159 TAIR:At1g04550 eggNOG:NOG330636
InParanoid:Q38830 KO:K14484 OMA:WKERGRI PhylomeDB:Q38830
ProtClustDB:CLSN2681806 Genevestigator:Q38830 Uniprot:Q38830
Length = 239
Score = 175 (66.7 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 39/77 (50%), Positives = 50/77 (64%)
Query: 88 YVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLF-GCFGLS--EALKDA---D-SSEFVP 140
+VKV+MDG RK+D+ H Y +LA LE++F G G + E +K D SS+FV
Sbjct: 126 FVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVL 185
Query: 141 IYEDKDGDWMLAGDVPW 157
YEDK+GDWML GDVPW
Sbjct: 186 TYEDKEGDWMLVGDVPW 202
Score = 70 (29.7 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 6 TELRLGLPGRDGCDSGLXXXXXXXXXXXXRAFSDICDEANYETNGERKINPTKS-QVVGW 64
+EL LGL G G + F + + + E++ + +P +S QVVGW
Sbjct: 18 SELELGL----GLSLGGGAWKERGRILTAKDFPSVGSKRSAESSSHQGASPPRSSQVVGW 73
Query: 65 PPVCSYRRKNSFNEK 79
PP+ +R + N +
Sbjct: 74 PPIGLHRMNSLVNNQ 88
>TAIR|locus:2051154 [details] [associations]
symbol:IAA13 "auxin-induced protein 13" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC002332 HOGENOM:HOG000238261
UniGene:At.10797 ProtClustDB:CLSN2681806 EMBL:U18415 EMBL:AF332399
EMBL:BT005874 EMBL:AY085194 EMBL:Z26543 IPI:IPI00536192
IPI:IPI00548760 PIR:S58499 RefSeq:NP_001118434.1 RefSeq:NP_180889.1
RefSeq:NP_850205.1 UniGene:At.74387 IntAct:Q38831 STRING:Q38831
EnsemblPlants:AT2G33310.2 GeneID:817894 KEGG:ath:AT2G33310
GeneFarm:3160 TAIR:At2g33310 eggNOG:NOG308656 InParanoid:Q38831
OMA:LEDMFFR PhylomeDB:Q38831 Genevestigator:Q38831
GermOnline:AT2G33310 Uniprot:Q38831
Length = 247
Score = 180 (68.4 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 40/80 (50%), Positives = 50/80 (62%)
Query: 88 YVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLF-----GCFGLS----EALKDAD-SSE 137
++KV+MDG RK+DL H Y +LA LE +F G GL+ + L+ D SSE
Sbjct: 131 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 190
Query: 138 FVPIYEDKDGDWMLAGDVPW 157
FV YEDK+GDWML GDVPW
Sbjct: 191 FVLTYEDKEGDWMLVGDVPW 210
Score = 64 (27.6 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 57 TKSQVVGWPPVCSYRRKNSFNEK 79
+ SQVVGWPP+ S+R + N +
Sbjct: 73 SSSQVVGWPPIGSHRMNSLVNNQ 95
>TAIR|locus:2034200 [details] [associations]
symbol:IAA15 "indole-3-acetic acid inducible 15"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC018848 HOGENOM:HOG000238261
EMBL:AJ441300 IPI:IPI00525123 PIR:F96835 PIR:S58502
RefSeq:NP_178155.1 UniGene:At.33908 IntAct:Q9C966
EnsemblPlants:AT1G80390.1 GeneID:844379 KEGG:ath:AT1G80390
GeneFarm:3170 TAIR:At1g80390 eggNOG:NOG283386 InParanoid:Q9C966
OMA:FTALENM PhylomeDB:Q9C966 ProtClustDB:CLSN2914430
Genevestigator:Q9C966 Uniprot:Q9C966
Length = 179
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 60/155 (38%), Positives = 76/155 (49%)
Query: 6 TELRLGLPGRDGCDSGLXXXXXXXXXXXXRAFSDICDEANYETNGERKINP--TKSQVVG 63
TEL L LPG + R F + D E + I+ T Q+VG
Sbjct: 19 TELTLALPG-----TPTNASEGPKKFGNKRRFLETVDLKLGEAHENNYISSMVTNDQLVG 73
Query: 64 WPPVCSYRRKNSFNEKDRVESSKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLF-G 122
WPPV + R+ + K YVKV++DGA +LRK+DLGM+ Y L ALE +F G
Sbjct: 74 WPPVATARK--TVRRK--------YVKVALDGAAYLRKVDLGMYDCYGQLFTALENMFQG 123
Query: 123 CFGLSEALKDADSSEFVPIYEDKDGDWMLAGDVPW 157
+ + EFV YEDKDGD ML GDVPW
Sbjct: 124 IITICRVTELERKGEFVATYEDKDGDLMLVGDVPW 158
>UNIPROTKB|Q9LG86 [details] [associations]
symbol:IAA2 "Auxin-responsive protein IAA2" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:AP002743
EMBL:AK100314 RefSeq:NP_001042263.1 UniGene:Os.19952 GeneID:4326775
KEGG:dosa:Os01t0190300-01 KEGG:osa:4326775 Gramene:Q9LG86
eggNOG:NOG325733 OMA:KRIEHAP ProtClustDB:CLSN2691155 Uniprot:Q9LG86
Length = 238
Score = 171 (65.3 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 41/106 (38%), Positives = 56/106 (52%)
Query: 65 PPVCSYRRKNSFNEKDRVESSKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLF-GC 123
PP S + KD M+VK++MDG P RK+DL + GY L+ A++KLF G
Sbjct: 97 PPPSSSPQNGDKASKDGGAEKGMFVKINMDGVPIGRKVDLAAYGGYAQLSAAVDKLFRGL 156
Query: 124 FGLSEALKD--ADSS---------EFVPIYEDKDGDWMLAGDVPWE 158
A D AD++ E+ +YED +GD ML GDVPW+
Sbjct: 157 LAAQSAAADGEADAAAAGEMVGGGEYTLVYEDDEGDRMLVGDVPWQ 202
Score = 58 (25.5 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 48 TNGERKINPT----KSQVVGWPPVCSYRR 72
+NG P+ + VVGWPPV S+RR
Sbjct: 54 SNGTNASKPSGAAAAAPVVGWPPVRSFRR 82
>TAIR|locus:2129900 [details] [associations]
symbol:IAA14 "indole-3-acetic acid inducible 14"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010102
"lateral root morphogenesis" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0009733 "response to auxin stimulus" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009741 "response
to brassinosteroid stimulus" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] [GO:0048527 "lateral root
development" evidence=RCA] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009536
GO:GO:0045892 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733
GO:GO:0006417 GO:GO:0009734 GO:GO:0003700 GO:GO:0006351
GO:GO:0009416 EMBL:Z97336 EMBL:AL161539 GO:GO:0010102
HOGENOM:HOG000238261 eggNOG:NOG281606 EMBL:AF334718 EMBL:U18416
IPI:IPI00523753 PIR:C85159 PIR:H71407 PIR:S58501 RefSeq:NP_193191.2
UniGene:At.10798 IntAct:Q38832 STRING:Q38832
EnsemblPlants:AT4G14550.1 GeneID:827102 KEGG:ath:AT4G14550
GeneFarm:3165 TAIR:At4g14550 InParanoid:Q38832 OMA:GEAEEAM
PhylomeDB:Q38832 ProtClustDB:CLSN2915039 Genevestigator:Q38832
GermOnline:AT4G14550 Uniprot:Q38832
Length = 228
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 88 YVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCF--------GLSEALKDA------ 133
+VKVSMDGAP+LRK+DL M+ Y DL+ AL K+F F G+ + + ++
Sbjct: 112 FVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLL 171
Query: 134 DSSEFVPIYEDKDGDWMLAGDVPW 157
+SSE+VP YEDKDGDWML GDVPW
Sbjct: 172 NSSEYVPSYEDKDGDWMLVGDVPW 195
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 55/148 (37%), Positives = 70/148 (47%)
Query: 1 MELEITELRLGLPG-----RDGCDSGLXXXXXXXXXXXXRAF--SDICDEANYETNGERK 53
M L+ TEL LGLPG SG+ + S+ + TNG K
Sbjct: 1 MNLKETELCLGLPGGTETVESPAKSGVGNKRGFSETVDLKLNLQSNKQGHVDLNTNGAPK 60
Query: 54 IN---------PTKSQVVGWPPVCSYRRKNSFNEKDRVESSKM--------YVKVSMDGA 96
P K+QVVGWPPV +YR+ N+K M +VKVSMDGA
Sbjct: 61 EKTFLKDPSKPPAKAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVAFVKVSMDGA 120
Query: 97 PFLRKIDLGMHQGYPDLAMALEKLFGCF 124
P+LRK+DL M+ Y DL+ AL K+F F
Sbjct: 121 PYLRKVDLKMYTSYKDLSDALAKMFSSF 148
>UNIPROTKB|Q652A1 [details] [associations]
symbol:IAA26 "Auxin-responsive protein IAA26" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AP005681 EMBL:AK111128 RefSeq:NP_001063732.1 UniGene:Os.57199
EnsemblPlants:LOC_Os09g35870.1 GeneID:4347643
KEGG:dosa:Os09t0527700-01 KEGG:osa:4347643 Gramene:Q652A1
eggNOG:NOG296772 OMA:WEHAVVY ProtClustDB:CLSN2697868 Uniprot:Q652A1
Length = 140
Score = 182 (69.1 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 44/101 (43%), Positives = 54/101 (53%)
Query: 65 PPVCSYRRKNSFNEKDRVE-SSKM-----YVKVSMDGAPFLRKIDLGMHQGYPDLAMALE 118
PP S RR + SS M +VKVSMDG P+LRK+D+ + Y +L AL
Sbjct: 18 PPGASARRARRGRKNGHPPPSSSMIQAAYFVKVSMDGTPYLRKVDVAAYGDYLELVEALN 77
Query: 119 KLFGCFGLSEALKDADSS-EFVPIYEDKDGDWMLAGDVPWE 158
+F C + L D E +YED DGDWML GDVPWE
Sbjct: 78 DMFYCSTIG--LMDGYGEWEHAVVYEDGDGDWMLVGDVPWE 116
Score = 41 (19.5 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 8/12 (66%), Positives = 10/12 (83%)
Query: 3 LEITELRLGLPG 14
+E+TEL LG PG
Sbjct: 9 VELTELTLGPPG 20
>TAIR|locus:2139890 [details] [associations]
symbol:IAA11 "indole-3-acetic acid inducible 11"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010583
"response to cyclopentenone" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0009506
GO:GO:0005634 EMBL:CP002687 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AL161573 HOGENOM:HOG000238261
IPI:IPI00846427 RefSeq:NP_001078460.1 UniGene:At.25401
STRING:A8MR39 EnsemblPlants:AT4G28640.2 GeneID:828982
KEGG:ath:AT4G28640 OMA:RTADSMA ProtClustDB:CLSN2685745
Genevestigator:A8MR39 Uniprot:A8MR39
Length = 302
Score = 162 (62.1 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 42/96 (43%), Positives = 53/96 (55%)
Query: 79 KDRVESSKM----YVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCFGLSEALKDAD 134
K+R +S+KM +VKV+MDG P RKIDL H+ Y L+ LE++F L + D
Sbjct: 125 KNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETD 184
Query: 135 -------------SSEFVPIYEDKDGDWMLAGDVPW 157
SS V YEDK+GDWML GDVPW
Sbjct: 185 GHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPW 220
Score = 68 (29.0 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 57 TKSQVVGWPPVCSYRRKNSFNE 78
T QVVGWPP+ +YR + N+
Sbjct: 85 TSGQVVGWPPIRTYRMNSMVNQ 106
>UNIPROTKB|Q5W670 [details] [associations]
symbol:IAA18 "Auxin-responsive protein IAA18" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC144740 EMBL:AK071192 RefSeq:NP_001056086.1 UniGene:Os.87732
PRIDE:Q5W670 EnsemblPlants:LOC_Os05g44810.1
EnsemblPlants:LOC_Os05g44810.2 EnsemblPlants:LOC_Os05g44810.3
GeneID:4339365 KEGG:dosa:Os05t0523300-01 KEGG:osa:4339365
Gramene:Q5W670 eggNOG:NOG327576 OMA:IRDEREW ProtClustDB:CLSN2691827
Uniprot:Q5W670
Length = 327
Score = 128 (50.1 bits), Expect = 5.5e-17, Sum P(3) = 5.5e-17
Identities = 40/115 (34%), Positives = 58/115 (50%)
Query: 41 CDEANYETN--GERKINPTKSQVVGWPPVCSYRRK----NSFNEK---------DRVE-- 83
C A + +N G I P VVGWPP+ S+RR +SF + D+ +
Sbjct: 150 CSAAAHSSNPQGRGAIPP----VVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPI 205
Query: 84 -SSKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCFGLSEALKDADSSE 137
+ VK++MDG P RK+DL ++ Y L+ A+E+LF G EA KD +E
Sbjct: 206 CKKRPLVKINMDGIPIGRKVDLQIYDSYQKLSSAVEELFR--GFLEAQKDLSCAE 258
Score = 83 (34.3 bits), Expect = 5.5e-17, Sum P(3) = 5.5e-17
Identities = 13/18 (72%), Positives = 16/18 (88%)
Query: 141 IYEDKDGDWMLAGDVPWE 158
+YED DGD MLAGD+PW+
Sbjct: 282 VYEDNDGDRMLAGDIPWK 299
Score = 38 (18.4 bits), Expect = 5.5e-17, Sum P(3) = 5.5e-17
Identities = 7/8 (87%), Positives = 8/8 (100%)
Query: 7 ELRLGLPG 14
EL+LGLPG
Sbjct: 48 ELKLGLPG 55
>UNIPROTKB|Q6H543 [details] [associations]
symbol:IAA7 "Auxin-responsive protein IAA7" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
eggNOG:NOG303951 EMBL:AP005394 EMBL:AP005756 EMBL:AK121870
RefSeq:NP_001046357.1 UniGene:Os.7355
EnsemblPlants:LOC_Os02g13520.1 GeneID:4328796
KEGG:dosa:Os02t0228900-01 KEGG:osa:4328796 Gramene:Q6H543
OMA:QEDVAIS ProtClustDB:CLSN2692586 Uniprot:Q6H543
Length = 300
Score = 123 (48.4 bits), Expect = 7.8e-16, Sum P(3) = 7.8e-16
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 49 NGERKINPTKSQVVGWPPVCSYRRKNSFNEKDRVE------SSKM-------YVKVSMDG 95
NG + + VVGWPPV ++RR + + K +E ++K ++K++MDG
Sbjct: 127 NGCFQTRSPSTPVVGWPPVRTFRRNLATSSKASLELQNGKKAAKAEEIKRAPFIKINMDG 186
Query: 96 APFLRKIDLGMHQGYPDLAMALEKLFGCFGLSEALKD 132
P RKIDL Y L++A++KLF GL A +D
Sbjct: 187 VPIGRKIDLNAFDSYEKLSLAVDKLFR--GLLAAQRD 221
Score = 75 (31.5 bits), Expect = 7.8e-16, Sum P(3) = 7.8e-16
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 135 SSEFVPIYEDKDGDWMLAGDVPW 157
+ E+ +YED +GD +L GDVPW
Sbjct: 244 TGEYTLVYEDYEGDKVLVGDVPW 266
Score = 38 (18.4 bits), Expect = 7.8e-16, Sum P(3) = 7.8e-16
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 2 ELEITELRLGLPG---RDGC-DSG 21
E + EL LGLPG R C D G
Sbjct: 37 EEKTLELSLGLPGGGWRAACRDKG 60
>TAIR|locus:2088324 [details] [associations]
symbol:PAP1 "phytochrome-associated protein 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0006995 "cellular response to
nitrogen starvation" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AP000373 HOGENOM:HOG000238261
UniGene:At.16067 ProtClustDB:CLSN2679451 EMBL:AF088281
EMBL:AF332394 EMBL:AF332401 EMBL:AF386948 EMBL:AY072502
EMBL:AY087745 IPI:IPI00539954 RefSeq:NP_188271.1 UniGene:At.20072
UniGene:At.47260 IntAct:Q8LAL2 EnsemblPlants:AT3G16500.1
GeneID:820898 KEGG:ath:AT3G16500 GeneFarm:3185 TAIR:At3g16500
eggNOG:NOG303951 InParanoid:Q8LAL2 OMA:DEEDHSA PhylomeDB:Q8LAL2
Genevestigator:Q8LAL2 GermOnline:AT3G16500 Uniprot:Q8LAL2
Length = 269
Score = 154 (59.3 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 38/101 (37%), Positives = 52/101 (51%)
Query: 73 KNSFNEKDRVESSK--MYVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLF-GCFGLSEA 129
K+ EK +VE+ K M+VK++MDG P RK+DL + Y L+ ++KLF G
Sbjct: 137 KSDDGEK-QVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRD 195
Query: 130 LKDADSSE------------FVPIYEDKDGDWMLAGDVPWE 158
+ D E F YED +GD ML GDVPW+
Sbjct: 196 ISDGQGEEKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQ 236
Score = 61 (26.5 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 27/92 (29%), Positives = 37/92 (40%)
Query: 7 ELRLGLPGRDGCDSGLXXXXXXXXXXXXRAFSDI---CDEANYETNGERKIN-PTKSQ-- 60
ELRLG PG D D + D C N+ + + + P SQ
Sbjct: 39 ELRLGPPGGDEEDHSAIKKKNTEIRNIKKETEDKSFHCFNGNHFSPSNKTTSVPHISQKR 98
Query: 61 -----VVGWPPVCSYRRKNSFNEKDRV--ESS 85
VVGWPPV S+R+ + ++ ESS
Sbjct: 99 TAPGPVVGWPPVRSFRKNLASTSSSKLGNESS 130
>TAIR|locus:2180557 [details] [associations]
symbol:IAA28 "AT5G25890" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0010102 "lateral
root morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 EMBL:AF149413
GO:GO:0010102 EMBL:AC005405 HOGENOM:HOG000238261 KO:K14484
EMBL:AF149816 EMBL:BT000427 EMBL:BT002175 IPI:IPI00545995
PIR:T52143 RefSeq:NP_568478.1 UniGene:At.11439 IntAct:Q9XFM0
EnsemblPlants:AT5G25890.1 GeneID:832658 KEGG:ath:AT5G25890
GeneFarm:3188 TAIR:At5g25890 eggNOG:NOG283222 InParanoid:Q9XFM0
OMA:WEMFVST PhylomeDB:Q9XFM0 ProtClustDB:CLSN2917715
Genevestigator:Q9XFM0 GermOnline:AT5G25890 Uniprot:Q9XFM0
Length = 175
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 45/124 (36%), Positives = 72/124 (58%)
Query: 43 EANYETNGERKINPTKSQVVGWPPVCSYRR------KNSFNEKDRVESSKMYVKVSMDGA 96
E ++ +N ++ P VVGWPPV S RR K +K+ E ++YVK++M+G
Sbjct: 35 ETSFLSNNRVEVAP----VVGWPPVRSSRRNLTAQLKEEMKKKESDEEKELYVKINMEGV 90
Query: 97 PFLRKIDLGMHQGYPDLAMALEKLFGCFGLSEALKDA-D-SSEFVPIYEDKDGDWMLAGD 154
P RK++L + Y L+ A+++LF + KD+ D + ++ +YED +GD +L GD
Sbjct: 91 PIGRKVNLSAYNNYQQLSHAVDQLF-------SKKDSWDLNRQYTLVYEDTEGDKVLVGD 143
Query: 155 VPWE 158
VPWE
Sbjct: 144 VPWE 147
>UNIPROTKB|Q8LQ74 [details] [associations]
symbol:IAA6 "Auxin-responsive protein IAA6" species:39947
"Oryza sativa Japonica Group" [GO:0006417 "regulation of
translation" evidence=ISS] [GO:0009733 "response to auxin stimulus"
evidence=IC] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733 GO:GO:0006417
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
ProtClustDB:CLSN2691827 eggNOG:NOG303951 EMBL:AP003768
EMBL:AK068600 RefSeq:NP_001044208.1 UniGene:Os.75606 STRING:Q8LQ74
DNASU:4326541 EnsemblPlants:LOC_Os01g53880.2
EnsemblPlants:LOC_Os01g53880.3 EnsemblPlants:LOC_Os01g53880.4
EnsemblPlants:LOC_Os01g53880.5 EnsemblPlants:LOC_Os01g53880.6
GeneID:4326541 KEGG:dosa:Os01t0741900-01 KEGG:osa:4326541
Gramene:Q8LQ74 Uniprot:Q8LQ74
Length = 335
Score = 112 (44.5 bits), Expect = 5.0e-15, Sum P(3) = 5.0e-15
Identities = 33/93 (35%), Positives = 51/93 (54%)
Query: 61 VVGWPPVCSYRRK--NSFNEKDRVE------SSKM--------YVKVSMDGAPFLRKIDL 104
VVGWPP+ S+RR +S + K E ++K+ VK++MDG P RKIDL
Sbjct: 176 VVGWPPIRSFRRNLASSSSSKHSPEPQNDNANAKVTLTCKKNPLVKINMDGIPIGRKIDL 235
Query: 105 GMHQGYPDLAMALEKLFGCFGLSEALKDADSSE 137
+ Y L+ A+++LF G +A KD +++
Sbjct: 236 AAYNSYDGLSSAVKQLF--HGFLQAQKDQTNAQ 266
Score = 85 (35.0 bits), Expect = 5.0e-15, Sum P(3) = 5.0e-15
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 135 SSEFVPIYEDKDGDWMLAGDVPWE 158
S E+ +YED +GD ML GDVPW+
Sbjct: 284 SGEYTLVYEDSEGDRMLVGDVPWK 307
Score = 35 (17.4 bits), Expect = 5.0e-15, Sum P(3) = 5.0e-15
Identities = 6/8 (75%), Positives = 8/8 (100%)
Query: 7 ELRLGLPG 14
+L+LGLPG
Sbjct: 50 DLKLGLPG 57
>TAIR|locus:2195820 [details] [associations]
symbol:IAA18 "indole-3-acetic acid inducible 18"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=RCA] [GO:0048527 "lateral root development" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000238261
KO:K14484 EMBL:AC015448 EMBL:AF367263 EMBL:AY056062 EMBL:AY088406
EMBL:U49074 IPI:IPI00534235 PIR:H96558 RefSeq:NP_175607.1
UniGene:At.16067 IntAct:O24408 STRING:O24408
EnsemblPlants:AT1G51950.1 GeneID:841623 KEGG:ath:AT1G51950
GeneFarm:3181 TAIR:At1g51950 eggNOG:NOG285609 InParanoid:O24408
OMA:MIPQERR PhylomeDB:O24408 ProtClustDB:CLSN2679451
Genevestigator:O24408 GermOnline:AT1G51950 Uniprot:O24408
Length = 267
Score = 141 (54.7 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 35/87 (40%), Positives = 46/87 (52%)
Query: 87 MYVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCFGLSEALKDADSS---------- 136
M+VK++M G P RK+DL H Y L+ ++KLF GL A +D SS
Sbjct: 150 MFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFR--GLLAAQRDFPSSIEDEKPITGL 207
Query: 137 -----EFVPIYEDKDGDWMLAGDVPWE 158
E+ YED +GD ML GDVPW+
Sbjct: 208 LDGNGEYTLTYEDNEGDKMLVGDVPWQ 234
Score = 62 (26.9 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 18/68 (26%), Positives = 28/68 (41%)
Query: 7 ELRLGLPGRDGCDSGLXXXXXXX--XXXXXRAFSDICDEANYETNGERKINPTKSQVVGW 64
EL+LG PG + D + ++ +T ++ P VVGW
Sbjct: 43 ELKLGPPGEEDDDESMIRHMKKEPKDKSILSLAGKYFSPSSTKTTSHKRTAP--GPVVGW 100
Query: 65 PPVCSYRR 72
PPV S+R+
Sbjct: 101 PPVRSFRK 108
>TAIR|locus:2090527 [details] [associations]
symbol:IAA31 "indole-3-acetic acid inducible 31"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0048367 "shoot system development" evidence=IMP]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
GO:GO:0009630 GO:GO:0022621 EMBL:AB022219 HOGENOM:HOG000005696
EMBL:AY054274 EMBL:BT000543 IPI:IPI00540266 RefSeq:NP_188387.1
UniGene:At.22356 IntAct:Q8H174 EnsemblPlants:AT3G17600.1
GeneID:821026 KEGG:ath:AT3G17600 GeneFarm:3238 TAIR:At3g17600
eggNOG:NOG267119 InParanoid:Q8H174 OMA:KITRPER PhylomeDB:Q8H174
ProtClustDB:CLSN2913488 Genevestigator:Q8H174 GermOnline:AT3G17600
Uniprot:Q8H174
Length = 158
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 40/106 (37%), Positives = 55/106 (51%)
Query: 55 NPTKSQVVGWPPVCSYRRKNSFNEK--DRVESSKMYVKVSMDGAPFLRKIDLGMHQGYPD 112
+P + WPP+ S R + R + + ++VKV M+G P RK+DL + GY
Sbjct: 39 SPQREARQDWPPIKSRLRDTLKGRRLLRRGDDTSLFVKVYMEGVPIGRKLDLCVFSGYES 98
Query: 113 LAMALEKLFGCFGLSEALKDADSSEFVPIYEDKDGDWMLAGDVPWE 158
L LE L F S + D V YEDKDGDWM+ GD+PW+
Sbjct: 99 L---LENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMMVGDIPWD 141
>UNIPROTKB|Q6K846 [details] [associations]
symbol:IAA9 "Auxin-responsive protein IAA9" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
ProtClustDB:CLSN2695987 EMBL:AC069158 EMBL:AP004240 EMBL:AK073365
RefSeq:NP_001048437.1 UniGene:Os.23256
EnsemblPlants:LOC_Os02g56120.1 EnsemblPlants:LOC_Os02g56120.2
GeneID:4331061 KEGG:dosa:Os02t0805100-01 KEGG:osa:4331061
Gramene:Q6K846 eggNOG:NOG253641 OMA:ARSRACG Uniprot:Q6K846
Length = 182
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 44/106 (41%), Positives = 54/106 (50%)
Query: 58 KSQVVGWPPVCSYRRKNSFNEKDRVESSKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMAL 117
K VVGWPPV S RR YVKV +G RK+DL +H Y +LA L
Sbjct: 73 KKTVVGWPPVSSARRACG---------GANYVKVKKEGDAIGRKVDLALHSSYDELAATL 123
Query: 118 EKLFGCF---GLSEALKD--ADSSEFVPIYEDKDGDWMLAGDVPWE 158
++F G + D D++ V YED DGDWML GDVPW+
Sbjct: 124 ARMFPTNDHQGEKKMANDDHGDAAGPVVTYEDGDGDWMLVGDVPWD 169
>TAIR|locus:2020255 [details] [associations]
symbol:IAA10 "indoleacetic acid-induced protein 10"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC002411 GO:GO:0010200 EMBL:U18412
EMBL:AF332396 IPI:IPI00520254 PIR:S58496 RefSeq:NP_171906.1
UniGene:At.21582 IntAct:Q38828 PaxDb:Q38828 PRIDE:Q38828
EnsemblPlants:AT1G04100.1 GeneID:839290 KEGG:ath:AT1G04100
GeneFarm:3157 TAIR:At1g04100 eggNOG:NOG280843 HOGENOM:HOG000238261
InParanoid:Q38828 OMA:RTYRINS PhylomeDB:Q38828
ProtClustDB:CLSN2914368 Genevestigator:Q38828 GermOnline:AT1G04100
Uniprot:Q38828
Length = 261
Score = 133 (51.9 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 36/90 (40%), Positives = 46/90 (51%)
Query: 85 SKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLF-------------GCFGLSEAL- 130
+ M VKV+MDG RK+DL Y L L+ +F G + E
Sbjct: 150 TSMLVKVTMDGVIIGRKVDLNALDSYAALEKTLDLMFFQIPSPVTRSNTQGYKTIKETCT 209
Query: 131 -KDAD-SSEFVPIYEDKDGDWMLAGDVPWE 158
K D SSE++ Y+DKDGDWML GDVPW+
Sbjct: 210 SKLLDGSSEYIITYQDKDGDWMLVGDVPWQ 239
Score = 59 (25.8 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 55 NPTKSQVVGWPPVCSYRRKNSFNE 78
N T+ VGWPP+ +YR + N+
Sbjct: 88 NATRQVAVGWPPLRTYRINSLVNQ 111
>TAIR|locus:2041324 [details] [associations]
symbol:IAA20 "indole-3-acetic acid inducible 20"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0009647 "skotomorphogenesis" evidence=IMP]
[GO:0010588 "cotyledon vascular tissue pattern formation"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
EMBL:AC004411 GO:GO:0009630 GO:GO:0009647 GO:GO:0010588
EMBL:AK117233 EMBL:AF348576 EMBL:U49076 IPI:IPI00547197 PIR:T02188
RefSeq:NP_182222.1 UniGene:At.10480 IntAct:O24410 STRING:O24410
DNASU:819313 EnsemblPlants:AT2G46990.1 GeneID:819313
KEGG:ath:AT2G46990 GeneFarm:3236 TAIR:At2g46990 eggNOG:NOG254610
HOGENOM:HOG000005696 InParanoid:O24410 OMA:KISRANY PhylomeDB:O24410
ProtClustDB:CLSN2683572 Genevestigator:O24410 GermOnline:AT2G46990
Uniprot:O24410
Length = 175
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 38/83 (45%), Positives = 47/83 (56%)
Query: 77 NEKDRVESSKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCFGLSEALKD-ADS 135
NE + V S YVKV+M+G P RKIDL GY DL L+ +F L +D +
Sbjct: 77 NECNSVGS--FYVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNE 134
Query: 136 SEFVPIYEDKDGDWMLAGDVPWE 158
V Y DK+GDWM+ GDVPWE
Sbjct: 135 KSHVLTYADKEGDWMMVGDVPWE 157
>TAIR|locus:2098023 [details] [associations]
symbol:IAA30 "indole-3-acetic acid inducible 30"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;RCA;TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0010262 "somatic embryogenesis" evidence=IMP] [GO:0010583
"response to cyclopentenone" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 GO:GO:0048364 GO:GO:0009630
GO:GO:0010262 EMBL:AL138651 PIR:T48002 HOGENOM:HOG000005696
ProtClustDB:CLSN2683572 EMBL:AY669801 IPI:IPI00529772
RefSeq:NP_191769.1 UniGene:At.50305 IntAct:Q9M1R4 STRING:Q9M1R4
EnsemblPlants:AT3G62100.1 GeneID:825383 KEGG:ath:AT3G62100
GeneFarm:3237 TAIR:At3g62100 eggNOG:NOG324376 InParanoid:Q9M1R4
OMA:EMMIMEE PhylomeDB:Q9M1R4 Genevestigator:Q9M1R4
GermOnline:AT3G62100 Uniprot:Q9M1R4
Length = 172
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 39/83 (46%), Positives = 48/83 (57%)
Query: 77 NEKDRVESSKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCFGLSEALKDADSS 136
NE + V S YVKV+M+G P RKIDL GY DL L+ +F L +D S
Sbjct: 75 NECNSVGS--FYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDMCSE 132
Query: 137 E-FVPIYEDKDGDWMLAGDVPWE 158
+ V Y DK+GDWM+ GDVPWE
Sbjct: 133 KSHVLTYADKEGDWMMVGDVPWE 155
>TAIR|locus:2116505 [details] [associations]
symbol:IAA29 "indole-3-acetic acid inducible 29"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0010114 "response to red
light" evidence=IEP] [GO:0010218 "response to far red light"
evidence=IEP] [GO:0010583 "response to cyclopentenone"
evidence=RCA] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010114 EMBL:AL021811
EMBL:AL161580 HOGENOM:HOG000238261 EMBL:AF380646 EMBL:AY054137
IPI:IPI00531341 PIR:T05400 RefSeq:NP_567891.1 UniGene:At.19102
IntAct:Q93WC4 STRING:Q93WC4 EnsemblPlants:AT4G32280.1 GeneID:829361
KEGG:ath:AT4G32280 GeneFarm:3189 TAIR:At4g32280 eggNOG:NOG320017
InParanoid:Q93WC4 PhylomeDB:Q93WC4 Genevestigator:Q93WC4
GermOnline:AT4G32280 Uniprot:Q93WC4
Length = 251
Score = 130 (50.8 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 85 SKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCFGLSEALKDADSSEFVPIYED 144
S MYVKV MDG RK+D+ + Y L +L +F + + D + + + ++
Sbjct: 158 SSMYVKVKMDGVAIARKVDIKLFNSYESLTNSLITMFTEY--EDC--DREDTNYTFTFQG 213
Query: 145 KDGDWMLAGDVPWE 158
K+GDW+L GDV W+
Sbjct: 214 KEGDWLLRGDVTWK 227
Score = 49 (22.3 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 8/9 (88%), Positives = 9/9 (100%)
Query: 59 SQVVGWPPV 67
S+VVGWPPV
Sbjct: 93 SEVVGWPPV 101
>UNIPROTKB|Q5VRR0 [details] [associations]
symbol:IAA20 "Auxin-responsive protein IAA20" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AB023482 EMBL:AP002536 EMBL:AK102541 RefSeq:NP_001056915.2
UniGene:Os.15798 STRING:Q5VRR0 EnsemblPlants:LOC_Os06g07040.1
GeneID:4340245 KEGG:dosa:Os06t0166500-01 KEGG:osa:4340245
Gramene:Q5VRR0 eggNOG:NOG246219 OMA:KCARRRS ProtClustDB:CLSN2695987
Uniprot:Q5VRR0
Length = 183
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 38/113 (33%), Positives = 56/113 (49%)
Query: 47 ETNGERKINPTKSQVVGWPPV-CSYRRKNSFNEKDRVESSKMYVKVSMDGAPFLRKIDLG 105
+++GE + + ++VGWPPV C +RR++ YVKV M+G RK+DL
Sbjct: 67 DSDGE--MGNKRRKLVGWPPVKCLHRRRDG-------GCGGGYVKVKMEGLAIGRKLDLS 117
Query: 106 MHQGYPDLAMALEKLFGCFGLSEALKDADSSEFVPIYEDKDGDWMLAGDVPWE 158
+ Y +L L +F + + YED +GDWM GDVPWE
Sbjct: 118 ILGSYAELLDTLHLMFPSTNQEDGHDRRRRHPYAVTYEDGEGDWMQVGDVPWE 170
>TAIR|locus:2196184 [details] [associations]
symbol:IAA34 "indole-3-acetic acid inducible 34"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC012189 EMBL:AJ458327
EMBL:AF334713 IPI:IPI00539053 PIR:B86284 RefSeq:NP_172959.2
UniGene:At.17166 IntAct:Q9C5X0 DNASU:838070
EnsemblPlants:AT1G15050.1 GeneID:838070 KEGG:ath:AT1G15050
GeneFarm:3196 TAIR:At1g15050 eggNOG:NOG305135 HOGENOM:HOG000090886
OMA:RITRRND PhylomeDB:Q9C5X0 ProtClustDB:CLSN2915091
ArrayExpress:Q9C5X0 Genevestigator:Q9C5X0 GermOnline:AT1G15050
Uniprot:Q9C5X0
Length = 185
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 31/70 (44%), Positives = 39/70 (55%)
Query: 88 YVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCFGLSEALKDADSSEFVPIYEDKDG 147
YVKV+MDG RK+ + H Y LA LE +FG +S SEF +Y D++G
Sbjct: 94 YVKVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMFGMQSVSGLRLFQMESEFCLVYRDEEG 153
Query: 148 DWMLAGDVPW 157
W AGDVPW
Sbjct: 154 LWRNAGDVPW 163
>TAIR|locus:2038701 [details] [associations]
symbol:IAA32 "indole-3-acetic acid inducible 32"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0009555 "pollen
development" evidence=IMP] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 EMBL:CP002685
GO:GO:0009733 GO:GO:0009734 GO:GO:0009555 GO:GO:0003700
GO:GO:0006351 GO:GO:0009793 EMBL:AC006200 EMBL:AJ458329
IPI:IPI00519467 PIR:G84421 RefSeq:NP_973390.1 UniGene:At.42513
IntAct:Q8RYC6 PRIDE:Q8RYC6 EnsemblPlants:AT2G01200.2 GeneID:814648
KEGG:ath:AT2G01200 GeneFarm:3190 TAIR:At2g01200 eggNOG:NOG327040
InParanoid:Q8RYC6 OMA:DVPWKEF PhylomeDB:Q8RYC6
ProtClustDB:CLSN2681132 Genevestigator:Q8RYC6 Uniprot:Q8RYC6
Length = 191
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 31/84 (36%), Positives = 44/84 (52%)
Query: 76 FNEKDRVESSKMYVKVSMDGAPFLRKIDLGMHQG-YPDLAMALEKLFGCFGLSEALKDAD 134
+N + YVKV++DG RK+ L + QG Y LA+ L +FG +S
Sbjct: 88 YNNEGESRGKYAYVKVNLDGLVVGRKVCL-VDQGAYATLALQLNDMFGMQTVSGLRLFQT 146
Query: 135 SSEFVPIYEDKDGDWMLAGDVPWE 158
SEF +Y D++G W GDVPW+
Sbjct: 147 ESEFSLVYRDREGIWRNVGDVPWK 170
>UNIPROTKB|Q6Z5M0 [details] [associations]
symbol:IAA8 "Auxin-responsive protein IAA8" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=ISS] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000005696
eggNOG:NOG267119 EMBL:AP005113 EMBL:AK066518 EMBL:AK108275
RefSeq:NP_001047972.1 UniGene:Os.55536
EnsemblPlants:LOC_Os02g49160.1 GeneID:4330571
KEGG:dosa:Os02t0723400-02 KEGG:osa:4330571 Gramene:Q6Z5M0
Uniprot:Q6Z5M0
Length = 205
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 31/80 (38%), Positives = 41/80 (51%)
Query: 87 MYVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFG-------CFGLSEAL-KDADSSEF 138
++VKV M+G P RK+DL GY L L +F C + +
Sbjct: 104 LFVKVYMEGVPIGRKLDLLPLDGYKGLVARLASMFRASITYHHCHRQFAVVGMKTNKVHH 163
Query: 139 VPIYEDKDGDWMLAGDVPWE 158
V YED++GDWM+AGDVPWE
Sbjct: 164 VLTYEDQEGDWMMAGDVPWE 183
>TAIR|locus:2175098 [details] [associations]
symbol:ARF4 "auxin response factor 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0010158 "abaxial
cell fate specification" evidence=IGI] [GO:0010050 "vegetative
phase change" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AB011483 GO:GO:0010050
HOGENOM:HOG000241141 GO:GO:0010158 EMBL:AF013466 EMBL:AF344313
EMBL:AY080832 EMBL:AY113977 IPI:IPI00525857 RefSeq:NP_200853.1
UniGene:At.6797 ProteinModelPortal:Q9ZTX9 SMR:Q9ZTX9 IntAct:Q9ZTX9
STRING:Q9ZTX9 PaxDb:Q9ZTX9 PRIDE:Q9ZTX9 EnsemblPlants:AT5G60450.1
GeneID:836166 KEGG:ath:AT5G60450 GeneFarm:3367 TAIR:At5g60450
eggNOG:NOG277773 InParanoid:Q9ZTX9 OMA:RILYTDS PhylomeDB:Q9ZTX9
ProtClustDB:CLSN2686689 Genevestigator:Q9ZTX9 GermOnline:AT5G60450
Uniprot:Q9ZTX9
Length = 788
Score = 124 (48.7 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 30/79 (37%), Positives = 41/79 (51%)
Query: 79 KDRVESSKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCFGLSEALKDADSSEF 138
K + S ++ KV G+ R IDL GY DL M LE+LF GL L+D +
Sbjct: 658 KPQSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGL---LRDPEKGWR 714
Query: 139 VPIYEDKDGDWMLAGDVPW 157
+ +Y D + D M+ GD PW
Sbjct: 715 I-LYTDSENDMMVVGDDPW 732
>TAIR|locus:2174562 [details] [associations]
symbol:IAA33 "indole-3-acetic acid inducible 33"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AB011482 EMBL:AY669804
IPI:IPI00546108 RefSeq:NP_200552.1 UniGene:At.55603 IntAct:Q9FKM7
EnsemblPlants:AT5G57420.1 GeneID:835848 KEGG:ath:AT5G57420
GeneFarm:3193 TAIR:At5g57420 eggNOG:NOG257684 HOGENOM:HOG000006227
InParanoid:Q9FKM7 OMA:CQRISLD PhylomeDB:Q9FKM7
ProtClustDB:CLSN2916817 ArrayExpress:Q9FKM7 Genevestigator:Q9FKM7
GermOnline:AT5G57420 Uniprot:Q9FKM7
Length = 171
Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 30/85 (35%), Positives = 44/85 (51%)
Query: 78 EKDRVESSKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCFGLSEALKDADSSE 137
E D V S V V ++G ++I L H Y LA AL ++F G +++ D D S
Sbjct: 64 EDDLVSSVVPPVTVVLEGRSICQRISLDKHGSYQSLASALRQMF-VDG-ADSTDDLDLSN 121
Query: 138 FVP----IYEDKDGDWMLAGDVPWE 158
+P YED + D +LAGD+ W+
Sbjct: 122 AIPGHLIAYEDMENDLLLAGDLTWK 146
>TAIR|locus:2138096 [details] [associations]
symbol:ARF9 "auxin response factor 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 HOGENOM:HOG000241141
EMBL:AF082176 EMBL:AC002343 EMBL:AL078468 EMBL:AL161560
EMBL:AF344312 EMBL:AK221865 EMBL:AK228263 IPI:IPI00519218
IPI:IPI00657180 PIR:T08917 RefSeq:NP_001031706.1 RefSeq:NP_194129.1
UniGene:At.3396 ProteinModelPortal:Q9XED8 SMR:Q9XED8 IntAct:Q9XED8
PaxDb:Q9XED8 PRIDE:Q9XED8 EnsemblPlants:AT4G23980.1 GeneID:828498
KEGG:ath:AT4G23980 GeneFarm:3373 TAIR:At4g23980 eggNOG:NOG300390
InParanoid:Q9XED8 OMA:YAQITLI PhylomeDB:Q9XED8
ProtClustDB:CLSN2685375 Genevestigator:Q9XED8 Uniprot:Q9XED8
Length = 638
Score = 117 (46.2 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 29/74 (39%), Positives = 39/74 (52%)
Query: 84 SSKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCFGLSEALKDADSSEFVPIYE 143
S++ KV M G P R +DL +GY +L +EKLF G L+ + E V +
Sbjct: 521 STRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKG---ELRSRNQWEIV--FT 575
Query: 144 DKDGDWMLAGDVPW 157
D +GD ML GD PW
Sbjct: 576 DDEGDMMLVGDDPW 589
>TAIR|locus:2076765 [details] [associations]
symbol:ARF18 "auxin response factor 18" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL132959 HOGENOM:HOG000241141 EMBL:AF334717
EMBL:AY059746 EMBL:AY070463 EMBL:AY091392 EMBL:AK229945
IPI:IPI00524053 PIR:T47975 RefSeq:NP_567119.1 UniGene:At.17167
UniGene:At.69165 ProteinModelPortal:Q9C5W9 SMR:Q9C5W9 IntAct:Q9C5W9
EnsemblPlants:AT3G61830.1 GeneID:825356 KEGG:ath:AT3G61830
GeneFarm:3414 TAIR:At3g61830 eggNOG:NOG268528 InParanoid:Q9C5W9
OMA:RISQFIV PhylomeDB:Q9C5W9 ProtClustDB:CLSN2917487
Genevestigator:Q9C5W9 GermOnline:AT3G61830 Uniprot:Q9C5W9
Length = 602
Score = 116 (45.9 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 75 SFNEKDRVESSKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCFGLSEALKDAD 134
S +E+ + ++S+ KV M G R +DL + + Y +L LE++F G A +D
Sbjct: 478 SMSEQKKQQTSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLA-RD-- 534
Query: 135 SSEFVPIYEDKDGDWMLAGDVPW 157
+++ ++ D +GD MLAGD PW
Sbjct: 535 --KWIVVFTDDEGDMMLAGDDPW 555
>TAIR|locus:2039124 [details] [associations]
symbol:ARF11 "auxin response factor 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC006526 EMBL:AC006418
HOGENOM:HOG000241141 EMBL:AY669791 EMBL:AK229757 EMBL:BX837073
EMBL:AK229924 IPI:IPI00544804 IPI:IPI00547357 IPI:IPI00656718
PIR:A84904 RefSeq:NP_001031548.1 RefSeq:NP_182176.2
RefSeq:NP_973701.1 UniGene:At.36497 ProteinModelPortal:Q9ZPY6
SMR:Q9ZPY6 PRIDE:Q9ZPY6 EnsemblPlants:AT2G46530.3 GeneID:819264
KEGG:ath:AT2G46530 GeneFarm:3388 TAIR:At2g46530 eggNOG:NOG303653
InParanoid:Q9ZPY6 OMA:MFEIEGE PhylomeDB:Q9ZPY6
ProtClustDB:CLSN2681223 ArrayExpress:Q9ZPY6 Genevestigator:Q9ZPY6
Uniprot:Q9ZPY6
Length = 622
Score = 115 (45.5 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 74 NSFNEKDRVESSKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCFGLSEALKDA 133
NS E+ + S++ +KV M G R +DL + + Y +L LEK+F G L
Sbjct: 499 NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG---ELSPK 555
Query: 134 DSSEFVPIYEDKDGDWMLAGDVPW 157
D ++ ++ D +GD ML GD PW
Sbjct: 556 D--KWAIVFTDDEGDRMLVGDDPW 577
>TAIR|locus:2174013 [details] [associations]
symbol:ARF2 "auxin response factor 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;TAS] [GO:0009911 "positive regulation of flower
development" evidence=IMP] [GO:0010047 "fruit dehiscence"
evidence=IMP] [GO:0010150 "leaf senescence" evidence=IMP]
[GO:0010227 "floral organ abscission" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0048481 "ovule development" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=RCA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0009737 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045892 GO:GO:0008285 GO:GO:0009734 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0010150 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009911 GO:GO:0010047
GO:GO:0010227 GO:GO:0048481 EMBL:AY669787 EMBL:AB016880
EMBL:AF336918 EMBL:AF378862 EMBL:BT000784 EMBL:BT001072
EMBL:AK221252 EMBL:AK221254 EMBL:AK221274 EMBL:AK221277
EMBL:AK221282 EMBL:AK221305 EMBL:U89771 EMBL:AJ441313 EMBL:AJ458328
IPI:IPI00518739 RefSeq:NP_201006.2 RefSeq:NP_851244.1
RefSeq:NP_974980.1 UniGene:At.21704 ProteinModelPortal:Q94JM3
SMR:Q94JM3 DIP:DIP-46014N IntAct:Q94JM3 STRING:Q94JM3 PaxDb:Q94JM3
PRIDE:Q94JM3 EnsemblPlants:AT5G62000.1 EnsemblPlants:AT5G62000.2
EnsemblPlants:AT5G62000.3 GeneID:836321 KEGG:ath:AT5G62000
GeneFarm:3364 TAIR:At5g62000 eggNOG:NOG255064 InParanoid:Q94JM3
OMA:HTESVEC PhylomeDB:Q94JM3 ProtClustDB:CLSN2680590
Genevestigator:Q94JM3 GermOnline:AT5G62000 Uniprot:Q94JM3
Length = 859
Score = 114 (45.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 29/88 (32%), Positives = 45/88 (51%)
Query: 74 NSFNEKD---RVESSKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCFGLSEAL 130
N+ + KD + SS+ KV G R +DL Q Y +L L++LF G E +
Sbjct: 718 NNPHPKDAQTKTNSSRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNG--ELM 775
Query: 131 KDADSSEFVPIYEDKDGDWMLAGDVPWE 158
A +++ +Y D++ D ML GD PW+
Sbjct: 776 --APKKDWLIVYTDEENDMMLVGDDPWQ 801
>TAIR|locus:2026145 [details] [associations]
symbol:ARF12 "auxin response factor 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 EMBL:AY669792 EMBL:AC007454
IPI:IPI00544760 PIR:C86467 RefSeq:NP_174691.2 UniGene:At.51185
ProteinModelPortal:Q9XID4 SMR:Q9XID4 IntAct:Q9XID4
EnsemblPlants:AT1G34310.1 GeneID:840331 KEGG:ath:AT1G34310
GeneFarm:3390 TAIR:At1g34310 eggNOG:NOG264447 PhylomeDB:Q9XID4
ProtClustDB:CLSN2681760 ArrayExpress:Q9XID4 Genevestigator:Q9XID4
GermOnline:AT1G34310 Uniprot:Q9XID4
Length = 593
Score = 111 (44.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 29/80 (36%), Positives = 38/80 (47%)
Query: 78 EKDRVESSKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCFGLSEALKDADSSE 137
+ + SS+ KV M G R +DL + GY L + LEKLF G L+ + E
Sbjct: 503 QNKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKG---QLQTRNQWE 559
Query: 138 FVPIYEDKDGDWMLAGDVPW 157
+ D D D ML GD PW
Sbjct: 560 IA--FTDSDEDKMLVGDDPW 577
>TAIR|locus:2035454 [details] [associations]
symbol:MP "MONOPTEROS" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IEP]
[GO:0009725 "response to hormone stimulus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0016020 "membrane" evidence=IDA] [GO:0009790 "embryo
development" evidence=IGI] [GO:0009908 "flower development"
evidence=IGI] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IGI] [GO:0048364 "root development" evidence=IGI]
[GO:0048507 "meristem development" evidence=IGI;RCA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=IMP;RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0009942 "longitudinal axis specification"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0016020 GO:GO:0003700 GO:GO:0006351
GO:GO:0048364 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908 GO:GO:0048507
EMBL:AC007797 KO:K14486 EMBL:AF037228 EMBL:AF037229 EMBL:AF334716
EMBL:BT002050 EMBL:BT008805 EMBL:AB199792 EMBL:U79557 EMBL:EF598523
EMBL:EF598524 EMBL:EF598525 EMBL:EF598526 EMBL:EF598527
EMBL:EF598528 EMBL:EF598529 EMBL:EF598530 EMBL:EF598531
EMBL:EF598532 EMBL:EF598533 EMBL:EF598534 EMBL:EF598535
EMBL:EF598536 EMBL:EF598537 EMBL:EF598538 EMBL:EF598539
EMBL:EF598540 EMBL:EF598541 EMBL:EF598542 EMBL:EF598543
EMBL:EF598544 EMBL:EF598545 EMBL:EF598546 IPI:IPI00538603
PIR:G86331 PIR:T51807 RefSeq:NP_173414.1 UniGene:At.10494
UniGene:At.41731 ProteinModelPortal:P93024 SMR:P93024 IntAct:P93024
STRING:P93024 PaxDb:P93024 PRIDE:P93024 EnsemblPlants:AT1G19850.1
GeneID:838573 KEGG:ath:AT1G19850 GeneFarm:3368 TAIR:At1g19850
eggNOG:NOG291711 InParanoid:P93024 OMA:ARYNKAT PhylomeDB:P93024
ProtClustDB:CLSN2682929 Genevestigator:P93024 GermOnline:AT1G19850
GO:GO:0010305 GO:GO:0009942 Uniprot:P93024
Length = 902
Score = 112 (44.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 68 CSYRRKNSFNEKDRVESSKM--YVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCFG 125
CS R+ + + ++ + ++ Y KV G+ R ID+ + Y +L A+E +FG G
Sbjct: 773 CSLRQNSKGSSWQKIATPRVRTYTKVQKTGSVG-RSIDVTSFKDYEELKSAIECMFGLEG 831
Query: 126 LSEALKDADSSEFVPIYEDKDGDWMLAGDVPWE 158
L L SS + +Y D + D +L GD PWE
Sbjct: 832 L---LTHPQSSGWKLVYVDYESDVLLVGDDPWE 861
>TAIR|locus:2202205 [details] [associations]
symbol:ARF19 "auxin response factor 19" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0048366 "leaf
development" evidence=IGI] [GO:0048527 "lateral root development"
evidence=IGI;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0010311
"lateral root formation" evidence=IGI] [GO:0007155 "cell adhesion"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0010583 "response to cyclopentenone" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0009723 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0046983 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010311 GO:GO:0048366 HOGENOM:HOG000241141
EMBL:U53672 EMBL:AY008390 EMBL:AY669794 EMBL:AC069143 EMBL:AB493467
EMBL:AJ441312 IPI:IPI00534870 PIR:G86325 RefSeq:NP_173356.1
UniGene:At.10488 ProteinModelPortal:Q8RYC8 SMR:Q8RYC8 IntAct:Q8RYC8
STRING:Q8RYC8 EnsemblPlants:AT1G19220.1 GeneID:838505
KEGG:ath:AT1G19220 GeneFarm:3421 TAIR:At1g19220 eggNOG:NOG331338
InParanoid:Q8RYC8 OMA:WEIEPVI PhylomeDB:Q8RYC8
ProtClustDB:CLSN2914206 Genevestigator:Q8RYC8 GermOnline:AT1G19220
Uniprot:Q8RYC8
Length = 1086
Score = 110 (43.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 80 DRVESSKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCFGLSEALKDADSSEFV 139
++ + + Y KV G+ R ID+ + GY +L L ++FG G L+D +S++
Sbjct: 952 NQTQRMRTYTKVQKRGSVG-RSIDVTRYSGYDELRHDLARMFGIEG---QLEDPLTSDWK 1007
Query: 140 PIYEDKDGDWMLAGDVPWE 158
+Y D + D +L GD PWE
Sbjct: 1008 LVYTDHENDILLVGDDPWE 1026
>TAIR|locus:2009298 [details] [associations]
symbol:ARF21 "auxin response factor 21" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC023279 EMBL:AC023913 IPI:IPI00539451
PIR:E86468 RefSeq:NP_174701.2 UniGene:At.51930
ProteinModelPortal:Q9C8N9 SMR:Q9C8N9 EnsemblPlants:AT1G34410.1
GeneID:840344 KEGG:ath:AT1G34410 GeneFarm:3425 TAIR:At1g34410
PhylomeDB:Q9C8N9 Genevestigator:Q9C8N9 GermOnline:AT1G34410
Uniprot:Q9C8N9
Length = 606
Score = 107 (42.7 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 27/80 (33%), Positives = 38/80 (47%)
Query: 78 EKDRVESSKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCFGLSEALKDADSSE 137
+ + SS+ KV M G R +DL + GY L + LEKLF G + ++
Sbjct: 503 QSKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQT-----RNQ 557
Query: 138 FVPIYEDKDGDWMLAGDVPW 157
+ + D DG ML GD PW
Sbjct: 558 WKIAFTDSDGYEMLVGDDPW 577
>TAIR|locus:2036288 [details] [associations]
symbol:ARF22 "auxin response factor 22" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 ProtClustDB:CLSN2681760
EMBL:AC023913 EMBL:AY669796 IPI:IPI00545778 PIR:C86468
RefSeq:NP_174699.2 UniGene:At.51186 ProteinModelPortal:Q9C8N7
SMR:Q9C8N7 IntAct:Q9C8N7 EnsemblPlants:AT1G34390.1 GeneID:840341
KEGG:ath:AT1G34390 GeneFarm:3426 TAIR:At1g34390 OMA:NITTNAN
PhylomeDB:Q9C8N7 Genevestigator:Q9C8N7 Uniprot:Q9C8N7
Length = 598
Score = 106 (42.4 bits), Expect = 0.00012, P = 0.00012
Identities = 27/80 (33%), Positives = 38/80 (47%)
Query: 78 EKDRVESSKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCFGLSEALKDADSSE 137
+ + S++ KV M G R +DL + GY L + LE+LF G L+ + E
Sbjct: 501 QSKQFSSTRTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKG---QLQTRNQWE 557
Query: 138 FVPIYEDKDGDWMLAGDVPW 157
+ D D D ML GD PW
Sbjct: 558 IA--FTDSDDDKMLVGDDPW 575
>TAIR|locus:2206717 [details] [associations]
symbol:ARF20 "auxin response factor 20" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC069160 HOGENOM:HOG000241141
eggNOG:NOG264447 ProtClustDB:CLSN2681760 EMBL:AY669795
IPI:IPI00656906 PIR:D86473 RefSeq:NP_174758.2 UniGene:At.51187
ProteinModelPortal:Q9C7I9 SMR:Q9C7I9 IntAct:Q9C7I9 PaxDb:Q9C7I9
PRIDE:Q9C7I9 EnsemblPlants:AT1G35240.1 GeneID:840413
KEGG:ath:AT1G35240 GeneFarm:3424 TAIR:At1g35240 PhylomeDB:Q9C7I9
Genevestigator:Q9C7I9 GermOnline:AT1G35240 Uniprot:Q9C7I9
Length = 590
Score = 103 (41.3 bits), Expect = 0.00073, P = 0.00073
Identities = 26/74 (35%), Positives = 36/74 (48%)
Query: 84 SSKMYVKVSMDGAPFLRKIDLGMHQGYPDLAMALEKLFGCFGLSEALKDADSSEFVPIYE 143
S++ KV M G R +DL + GY L + LEKLF G + +++ +
Sbjct: 493 STRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQT-----RNQWKIAFT 547
Query: 144 DKDGDWMLAGDVPW 157
D DG ML GD PW
Sbjct: 548 DSDGYEMLVGDDPW 561
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.137 0.426 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 158 146 0.00079 103 3 11 22 0.36 32
30 0.49 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 58
No. of states in DFA: 586 (62 KB)
Total size of DFA: 148 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.08u 0.17s 13.25t Elapsed: 00:00:02
Total cpu time: 13.08u 0.17s 13.25t Elapsed: 00:00:02
Start: Fri May 10 13:46:35 2013 End: Fri May 10 13:46:37 2013