Query 048173
Match_columns 359
No_of_seqs 223 out of 499
Neff 4.7
Searched_HMMs 46136
Date Fri Mar 29 07:01:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048173.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048173hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2043 Signaling protein SWIF 99.7 1.8E-18 3.9E-23 187.9 7.1 291 65-359 343-767 (896)
2 PF00583 Acetyltransf_1: Acety 99.5 3.3E-13 7.2E-18 102.9 9.1 76 60-137 2-83 (83)
3 PRK10314 putative acyltransfer 99.4 1.2E-12 2.6E-17 114.9 8.0 95 61-161 55-150 (153)
4 PF13508 Acetyltransf_7: Acety 99.4 2.9E-12 6.3E-17 99.0 8.0 71 60-138 9-79 (79)
5 COG1246 ArgA N-acetylglutamate 99.3 3.6E-12 7.7E-17 113.9 8.2 79 59-141 45-123 (153)
6 PTZ00330 acetyltransferase; Pr 99.3 2.1E-11 4.5E-16 102.5 9.5 79 60-140 58-140 (147)
7 PLN02706 glucosamine 6-phospha 99.2 5.5E-11 1.2E-15 101.1 10.0 77 62-140 63-143 (150)
8 PF13673 Acetyltransf_10: Acet 99.2 2.6E-11 5.6E-16 97.9 7.2 69 59-136 49-117 (117)
9 PRK10146 aminoalkylphosphonic 99.2 2.8E-11 6.1E-16 101.3 7.6 79 60-140 53-137 (144)
10 PRK07922 N-acetylglutamate syn 99.2 1.4E-10 3.1E-15 103.1 9.4 77 61-143 53-129 (169)
11 cd02169 Citrate_lyase_ligase C 99.1 1.2E-10 2.6E-15 113.7 8.7 71 61-140 13-83 (297)
12 TIGR02382 wecD_rffC TDP-D-fuco 99.1 3E-10 6.6E-15 101.9 9.3 77 61-141 106-185 (191)
13 PRK07757 acetyltransferase; Pr 99.1 3.4E-10 7.3E-15 96.4 9.1 78 61-144 48-125 (152)
14 PRK03624 putative acetyltransf 99.1 3E-10 6.6E-15 93.0 8.5 77 60-141 51-130 (140)
15 PHA00673 acetyltransferase dom 99.1 6.2E-10 1.3E-14 99.8 9.4 78 61-140 62-145 (154)
16 PF13527 Acetyltransf_9: Acety 99.0 9.3E-10 2E-14 90.6 8.9 77 59-139 46-127 (127)
17 TIGR02406 ectoine_EctA L-2,4-d 99.0 1.2E-09 2.7E-14 95.5 9.5 76 61-138 47-125 (157)
18 TIGR01575 rimI ribosomal-prote 99.0 9.8E-10 2.1E-14 89.2 7.9 79 61-144 38-119 (131)
19 PRK10975 TDP-fucosamine acetyl 99.0 2.1E-09 4.6E-14 96.3 10.7 77 61-141 109-188 (194)
20 PF13420 Acetyltransf_4: Acety 99.0 3.1E-09 6.8E-14 90.2 10.4 83 61-146 58-144 (155)
21 PLN02825 amino-acid N-acetyltr 99.0 1.3E-09 2.9E-14 113.6 9.5 78 59-140 412-489 (515)
22 COG0456 RimI Acetyltransferase 99.0 2.6E-09 5.7E-14 92.1 9.6 79 64-144 72-157 (177)
23 PRK05279 N-acetylglutamate syn 98.9 1.7E-09 3.7E-14 109.6 8.2 81 60-144 340-420 (441)
24 TIGR01890 N-Ac-Glu-synth amino 98.9 2.4E-09 5.1E-14 108.5 9.1 78 60-141 328-405 (429)
25 PRK09491 rimI ribosomal-protei 98.9 4.6E-09 1E-13 89.1 9.5 76 61-141 47-125 (146)
26 TIGR00124 cit_ly_ligase [citra 98.9 2.7E-09 5.9E-14 105.7 9.2 74 61-143 38-111 (332)
27 PRK13688 hypothetical protein; 98.9 4.1E-09 8.9E-14 93.8 9.2 76 60-142 51-134 (156)
28 TIGR03827 GNAT_ablB putative b 98.9 2.9E-09 6.2E-14 101.0 8.6 81 61-144 165-248 (266)
29 PRK10140 putative acetyltransf 98.9 7E-09 1.5E-13 88.0 9.4 80 61-143 58-143 (162)
30 TIGR03448 mycothiol_MshD mycot 98.9 9E-09 2E-13 97.0 9.9 78 62-141 208-288 (292)
31 PRK12308 bifunctional arginino 98.9 5.9E-09 1.3E-13 110.3 9.2 79 59-143 508-586 (614)
32 PF00533 BRCT: BRCA1 C Terminu 98.9 7.6E-09 1.7E-13 78.6 7.1 65 251-315 7-78 (78)
33 PRK09831 putative acyltransfer 98.8 7E-09 1.5E-13 88.8 7.0 69 60-142 59-127 (147)
34 KOG3139 N-acetyltransferase [G 98.8 3.5E-08 7.6E-13 89.1 9.3 75 65-141 68-146 (165)
35 cd00027 BRCT Breast Cancer Sup 98.7 3.7E-08 8.1E-13 71.5 7.2 64 253-316 2-72 (72)
36 TIGR03103 trio_acet_GNAT GNAT- 98.7 5E-08 1.1E-12 102.3 10.1 79 61-141 132-217 (547)
37 PRK15130 spermidine N1-acetylt 98.7 1.2E-07 2.7E-12 83.6 9.8 79 61-142 64-146 (186)
38 cd04301 NAT_SF N-Acyltransfera 98.7 1.2E-07 2.6E-12 65.8 7.8 59 61-119 6-64 (65)
39 COG3153 Predicted acetyltransf 98.7 6.5E-08 1.4E-12 88.2 8.0 86 54-144 46-134 (171)
40 smart00292 BRCT breast cancer 98.6 1.5E-07 3.2E-12 69.9 7.8 68 251-318 4-80 (80)
41 PRK10514 putative acetyltransf 98.6 8.9E-08 1.9E-12 80.6 7.1 70 61-141 57-126 (145)
42 KOG4362 Transcriptional regula 98.6 4.9E-08 1.1E-12 104.1 6.2 108 246-358 472-590 (684)
43 TIGR03448 mycothiol_MshD mycot 98.6 1.1E-07 2.5E-12 89.5 7.9 74 60-141 52-128 (292)
44 PF08445 FR47: FR47-like prote 98.6 3.8E-07 8.3E-12 73.4 9.7 58 81-141 22-82 (86)
45 PRK10151 ribosomal-protein-L7/ 98.6 3.4E-07 7.4E-12 80.3 10.0 78 61-141 74-155 (179)
46 PHA01807 hypothetical protein 98.6 1.5E-07 3.2E-12 83.8 7.8 71 61-132 60-136 (153)
47 PF13523 Acetyltransf_8: Acety 98.6 3.2E-07 6.9E-12 78.3 9.3 85 59-145 53-145 (152)
48 TIGR01686 FkbH FkbH-like domai 98.6 1.6E-07 3.4E-12 91.6 8.4 72 62-138 242-318 (320)
49 TIGR01211 ELP3 histone acetylt 98.6 1.8E-07 3.8E-12 98.0 9.0 79 61-141 421-516 (522)
50 PF13302 Acetyltransf_3: Acety 98.5 5.7E-07 1.2E-11 74.5 9.5 74 61-137 65-142 (142)
51 PRK10809 ribosomal-protein-S5- 98.5 5.7E-07 1.2E-11 80.0 9.6 78 61-141 84-166 (194)
52 PF12738 PTCB-BRCT: twin BRCT 98.5 1.2E-07 2.6E-12 71.4 4.3 57 253-310 1-63 (63)
53 TIGR03585 PseH pseudaminic aci 98.5 6.4E-07 1.4E-11 75.9 8.9 77 61-141 58-138 (156)
54 PRK01346 hypothetical protein; 98.5 4.9E-07 1.1E-11 90.1 9.3 79 59-141 52-136 (411)
55 PRK10562 putative acetyltransf 98.5 4.9E-07 1.1E-11 76.9 7.8 69 61-142 55-126 (145)
56 KOG3216 Diamine acetyltransfer 98.5 5.1E-07 1.1E-11 81.2 7.9 78 62-141 63-146 (163)
57 KOG3396 Glucosamine-phosphate 98.4 4.9E-07 1.1E-11 80.1 6.9 80 59-140 60-143 (150)
58 COG2153 ElaA Predicted acyltra 98.4 8.8E-07 1.9E-11 79.1 8.0 93 62-162 58-153 (155)
59 KOG3397 Acetyltransferases [Ge 98.3 1.6E-06 3.6E-11 79.8 6.7 79 60-141 63-141 (225)
60 COG3393 Predicted acetyltransf 98.1 8.4E-06 1.8E-10 78.9 8.1 79 61-143 184-264 (268)
61 KOG2488 Acetyltransferase (GNA 98.1 5.7E-06 1.2E-10 76.8 6.6 78 64-143 103-184 (202)
62 COG1247 Sortase and related ac 98.0 5E-05 1.1E-09 69.3 10.8 83 60-144 59-146 (169)
63 PF14542 Acetyltransf_CG: GCN5 98.0 3.1E-05 6.8E-10 61.7 7.5 67 61-132 6-72 (78)
64 COG3053 CitC Citrate lyase syn 97.9 2.8E-05 6.2E-10 76.5 8.3 78 58-144 41-118 (352)
65 COG1670 RimL Acetyltransferase 97.9 5.2E-05 1.1E-09 64.6 8.2 77 62-141 76-158 (187)
66 COG0454 WecD Histone acetyltra 97.8 2.1E-05 4.5E-10 57.0 3.7 47 83-136 83-130 (156)
67 PF13718 GNAT_acetyltr_2: GNAT 97.8 6.6E-05 1.4E-09 70.0 7.6 60 79-140 89-175 (196)
68 KOG3138 Predicted N-acetyltran 97.8 6.1E-05 1.3E-09 69.8 7.0 83 80-174 89-175 (187)
69 KOG3226 DNA repair protein [Re 97.7 2.6E-05 5.7E-10 78.7 4.3 82 250-332 318-405 (508)
70 COG2388 Predicted acetyltransf 97.5 0.00019 4.2E-09 60.3 5.5 56 60-117 21-76 (99)
71 PLN03123 poly [ADP-ribose] pol 97.2 0.00098 2.1E-08 74.8 8.5 83 248-330 392-482 (981)
72 KOG3234 Acetyltransferase, (GN 97.2 0.0019 4.1E-08 58.9 8.5 98 60-162 48-152 (173)
73 PLN03122 Poly [ADP-ribose] pol 97.2 0.001 2.2E-08 73.5 7.9 81 249-329 189-278 (815)
74 PF12568 DUF3749: Acetyltransf 97.1 0.0017 3.7E-08 57.1 6.7 72 61-139 45-123 (128)
75 KOG3235 Subunit of the major N 97.1 0.0026 5.6E-08 58.3 8.1 93 39-140 33-134 (193)
76 COG1444 Predicted P-loop ATPas 97.0 0.00068 1.5E-08 74.1 4.4 56 82-140 533-590 (758)
77 COG3818 Predicted acetyltransf 96.7 0.0046 1E-07 55.2 6.5 65 78-144 82-151 (167)
78 KOG4144 Arylalkylamine N-acety 96.3 0.0039 8.4E-08 56.9 3.9 59 81-141 102-161 (190)
79 PF06852 DUF1248: Protein of u 96.1 0.024 5.2E-07 52.5 7.8 78 61-140 54-136 (181)
80 COG3981 Predicted acetyltransf 96.1 0.03 6.4E-07 51.6 8.2 89 61-152 76-171 (174)
81 PF12746 GNAT_acetyltran: GNAT 95.7 0.053 1.1E-06 52.9 8.6 80 60-144 171-250 (265)
82 KOG3548 DNA damage checkpoint 95.5 0.0079 1.7E-07 66.8 2.4 44 286-329 990-1036(1176)
83 COG1243 ELP3 Histone acetyltra 95.4 0.017 3.8E-07 60.2 4.5 80 60-141 413-509 (515)
84 PF08444 Gly_acyl_tr_C: Aralky 95.3 0.016 3.6E-07 48.0 3.3 71 60-139 5-78 (89)
85 COG5628 Predicted acetyltransf 95.2 0.041 8.9E-07 48.5 5.5 69 61-132 44-116 (143)
86 KOG1929 Nucleotide excision re 95.2 0.034 7.3E-07 61.6 6.1 84 248-331 102-191 (811)
87 COG4552 Eis Predicted acetyltr 95.1 0.033 7.2E-07 56.5 5.4 56 79-138 69-124 (389)
88 TIGR03694 exosort_acyl putativ 94.8 0.12 2.5E-06 49.4 7.9 77 61-139 64-196 (241)
89 PF13480 Acetyltransf_6: Acety 94.5 0.11 2.4E-06 42.7 6.2 63 55-120 72-134 (142)
90 KOG0323 TFIIF-interacting CTD 94.3 0.02 4.3E-07 61.8 1.7 81 252-333 444-535 (635)
91 KOG4135 Predicted phosphogluco 93.9 0.16 3.4E-06 46.4 6.3 62 79-142 106-171 (185)
92 cd04264 DUF619-NAGS DUF619 dom 93.5 0.12 2.7E-06 43.4 4.6 47 62-108 16-62 (99)
93 PRK13834 putative autoinducer 93.3 0.54 1.2E-05 44.0 8.9 77 61-139 61-163 (207)
94 PF00765 Autoind_synth: Autoin 92.9 0.61 1.3E-05 42.9 8.7 78 61-140 52-154 (182)
95 KOG0966 ATP-dependent DNA liga 92.9 0.13 2.9E-06 56.7 4.8 72 257-328 642-721 (881)
96 KOG1929 Nucleotide excision re 92.8 0.15 3.4E-06 56.6 5.3 82 250-332 494-581 (811)
97 PF04377 ATE_C: Arginine-tRNA- 92.6 0.39 8.5E-06 42.1 6.6 56 61-119 46-101 (128)
98 KOG2481 Protein required for n 92.0 0.14 3E-06 54.2 3.6 62 266-329 344-416 (570)
99 KOG2535 RNA polymerase II elon 91.7 0.24 5.2E-06 50.6 4.8 50 90-141 497-547 (554)
100 KOG1472 Histone acetyltransfer 91.4 0.048 1E-06 59.7 -0.6 98 65-175 431-532 (720)
101 PF01233 NMT: Myristoyl-CoA:pr 89.7 0.92 2E-05 41.6 6.2 58 60-117 85-147 (162)
102 cd04265 DUF619-NAGS-U DUF619 d 89.3 0.79 1.7E-05 38.6 5.1 32 78-109 32-63 (99)
103 KOG3524 Predicted guanine nucl 89.2 0.29 6.4E-06 53.5 3.1 71 251-322 120-194 (850)
104 PF05301 Mec-17: Touch recepto 89.1 1.2 2.6E-05 39.0 6.3 76 54-132 9-98 (120)
105 PF13880 Acetyltransf_13: ESCO 88.6 0.42 9E-06 38.1 2.8 27 83-109 8-34 (70)
106 COG3375 Uncharacterized conser 88.3 2.1 4.5E-05 41.6 7.8 87 59-148 52-145 (266)
107 KOG3524 Predicted guanine nucl 88.2 0.29 6.2E-06 53.6 2.2 96 237-332 198-297 (850)
108 COG5163 NOP7 Protein required 87.8 0.47 1E-05 49.2 3.3 64 264-329 365-440 (591)
109 TIGR03827 GNAT_ablB putative b 87.2 1.2 2.6E-05 42.4 5.5 47 96-144 21-67 (266)
110 KOG0966 ATP-dependent DNA liga 86.9 0.76 1.6E-05 51.0 4.4 60 268-327 807-881 (881)
111 PRK01305 arginyl-tRNA-protein 84.1 4 8.6E-05 39.5 7.4 56 61-119 151-206 (240)
112 PF02474 NodA: Nodulation prot 79.5 2.2 4.7E-05 39.9 3.7 53 79-132 84-136 (196)
113 PRK06195 DNA polymerase III su 79.1 3.2 6.9E-05 40.9 5.0 43 249-291 220-266 (309)
114 PRK14351 ligA NAD-dependent DN 77.1 7.4 0.00016 42.9 7.5 67 250-316 610-683 (689)
115 PF13444 Acetyltransf_5: Acety 75.9 3.2 6.9E-05 34.0 3.4 39 64-102 41-100 (101)
116 PRK07956 ligA NAD-dependent DN 75.1 9.1 0.0002 42.0 7.5 67 250-317 591-664 (665)
117 PRK06063 DNA polymerase III su 74.6 9 0.0002 38.0 6.7 63 251-313 234-303 (313)
118 TIGR00575 dnlj DNA ligase, NAD 70.9 8.4 0.00018 42.2 6.0 58 251-309 586-650 (652)
119 COG3916 LasI N-acyl-L-homoseri 68.6 36 0.00078 32.6 8.9 78 60-139 59-161 (209)
120 COG2401 ABC-type ATPase fused 68.4 5.9 0.00013 42.0 4.0 77 80-158 241-325 (593)
121 PRK14350 ligA NAD-dependent DN 68.2 13 0.00029 40.9 6.8 63 250-313 594-663 (669)
122 COG2935 Putative arginyl-tRNA: 65.8 22 0.00047 34.9 7.0 56 61-119 158-213 (253)
123 PF01853 MOZ_SAS: MOZ/SAS fami 65.7 8.1 0.00017 36.3 4.0 35 79-114 80-114 (188)
124 COG0272 Lig NAD-dependent DNA 65.5 16 0.00035 40.2 6.8 65 248-313 593-664 (667)
125 TIGR03019 pepcterm_femAB FemAB 62.5 19 0.00041 35.2 6.1 74 61-139 203-279 (330)
126 PRK00756 acyltransferase NodA; 61.0 12 0.00025 35.1 4.0 45 79-124 84-128 (196)
127 COG3882 FkbH Predicted enzyme 59.6 11 0.00023 40.4 4.0 75 62-141 471-550 (574)
128 PF04768 DUF619: Protein of un 56.6 28 0.0006 31.9 5.7 47 64-110 72-118 (170)
129 cd04266 DUF619-NAGS-FABP DUF61 53.9 33 0.00071 29.5 5.4 30 78-107 37-67 (108)
130 COG5275 BRCT domain type II [G 50.9 28 0.0006 33.9 4.9 44 248-291 155-202 (276)
131 KOG2036 Predicted P-loop ATPas 49.3 17 0.00036 40.8 3.5 32 81-112 615-646 (1011)
132 PF04958 AstA: Arginine N-succ 47.7 50 0.0011 33.8 6.4 63 70-132 111-181 (342)
133 PLN03238 probable histone acet 47.6 17 0.00036 36.4 3.0 32 83-114 158-189 (290)
134 cd03173 DUF619-like DUF619 dom 44.5 58 0.0013 27.5 5.4 32 77-108 30-61 (98)
135 PF13264 DUF4055: Domain of un 42.5 43 0.00093 29.5 4.5 50 62-118 42-93 (138)
136 TIGR02990 ectoine_eutA ectoine 42.3 39 0.00084 32.5 4.5 42 98-141 104-151 (239)
137 KOG4601 Uncharacterized conser 41.7 22 0.00047 34.8 2.7 27 81-107 109-135 (264)
138 PLN03239 histone acetyltransfe 41.6 20 0.00043 36.7 2.5 32 83-114 216-247 (351)
139 KOG2696 Histone acetyltransfer 38.0 64 0.0014 33.6 5.4 50 77-128 214-264 (403)
140 TIGR03243 arg_catab_AOST argin 35.1 53 0.0011 33.5 4.4 65 71-137 108-180 (335)
141 PTZ00064 histone acetyltransfe 35.0 27 0.00058 37.6 2.3 32 83-114 387-418 (552)
142 TIGR03245 arg_AOST_alph argini 34.5 56 0.0012 33.4 4.4 62 71-132 109-178 (336)
143 PRK10456 arginine succinyltran 32.5 56 0.0012 33.5 4.0 62 71-132 110-179 (344)
144 PHA02769 hypothetical protein; 32.3 39 0.00084 30.0 2.5 79 61-141 52-139 (154)
145 TIGR03244 arg_catab_AstA argin 32.3 45 0.00097 34.0 3.3 65 71-137 108-180 (336)
146 KOG2779 N-myristoyl transferas 30.7 62 0.0013 33.6 4.0 53 61-115 143-202 (421)
147 COG5630 ARG2 Acetylglutamate s 29.6 79 0.0017 33.2 4.6 48 62-109 381-430 (495)
148 PLN00104 MYST -like histone ac 26.8 29 0.00063 36.7 1.0 32 83-114 309-340 (450)
149 cd04263 DUF619-NAGK-FABP DUF61 25.5 1.8E+02 0.0038 24.6 5.3 31 78-108 31-61 (98)
150 COG3473 Maleate cis-trans isom 25.2 1E+02 0.0022 30.0 4.2 36 104-141 108-149 (238)
151 PRK14852 hypothetical protein; 23.8 1.8E+02 0.0039 33.9 6.5 68 78-146 119-186 (989)
152 COG2898 Uncharacterized conser 21.1 3.5E+02 0.0075 29.5 7.6 82 23-120 376-457 (538)
153 PF09078 CheY-binding: CheY bi 20.8 1.2E+02 0.0025 24.1 3.0 56 253-309 1-60 (65)
154 cd08353 Glo_EDI_BRP_like_7 Thi 20.4 69 0.0015 26.4 1.9 28 113-142 3-32 (142)
No 1
>KOG2043 consensus Signaling protein SWIFT and related BRCT domain proteins [Transcription; Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]
Probab=99.74 E-value=1.8e-18 Score=187.95 Aligned_cols=291 Identities=22% Similarity=0.259 Sum_probs=200.5
Q ss_pred EEEEEEeeecC-CCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEEeec
Q 048173 65 VVAAVIYQIVP-ADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVAEVD 143 (359)
Q Consensus 65 IVgvi~l~i~~-~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~e~~ 143 (359)
.-+.+++...+ .+..+......++..+-+-+|.++..........+..+.+-+..+.....+.||.+. |+....+.+
T Consensus 343 ~~~~it~~~~~~~~~~~~~~~i~~~~~~~~~~~~ss~~~~~~qs~~~~~~~~~~~~~p~~~~~~~~~~~--~~~~~s~~~ 420 (896)
T KOG2043|consen 343 NMAAITLQNFPDDQTQGNAQPIENIPSDPPQKKYSSMVTYSPQSPNEKKDSRMVQPFPIPENVNSLLKL--DGIKFSEFD 420 (896)
T ss_pred cccccccccccccCcCcCccccccccCCcccccccCcceeccccccccCCccccccCCccccccccccc--ccccccccC
Confidence 67788888888 455788889999998888899999999998888888999999999999999999999 999888877
Q ss_pred ccCcc--------cCcchhh---hhhhcCCCC-cEEEecccccc----------------cccC------CCCC--C---
Q 048173 144 TEGRA--------GRLPLRQ---KFRKSTEPE-RVVIDGCSREG----------------AKLG------GFPP--S--- 184 (359)
Q Consensus 144 ~~g~~--------~~~~~~~---~m~K~l~~~-~~m~~~l~~~~----------------~~~~------~~~~--~--- 184 (359)
..++. ....++- ++...+.+. ++|-+|...+. ++.. ..|. .
T Consensus 421 ~e~~~~~d~~~~~~~~~iks~~~e~e~s~~~~s~~~~~hv~~~~~s~tq~~~s~~~~~~~~~~~~~~~i~~~~~~~~~~~ 500 (896)
T KOG2043|consen 421 PESPEKLDKLRKASEEVIKSNSGELENSFDSKSELFGKHVIDEHGSNTQMEDSVSDQKRESEVFNDVKITSYPAPPKQNN 500 (896)
T ss_pred CCcccccchhhhcccccccccchhhhhcccCCccccccccccCCCCccccccchhhhhhhccccccccccccCCCccccc
Confidence 76622 2222222 233333344 66666665544 0110 0000 0
Q ss_pred -----CCcccC--------------CCC-cchhhhhcccc-------------ccccccccccccCcccccCcCCccccC
Q 048173 185 -----LDTVHD--------------SGD-LATFEKVHCSN-------------MTVGAAQIGADTGAKHCSFSQGQRRED 231 (359)
Q Consensus 185 -----~~~~~~--------------~~~-~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~s~ss~~~kr~~ 231 (359)
...+.| |.. ...-++.-|++ ..+...+.+....+.+|.++..+|+..
T Consensus 501 ~~~~~~~~~id~k~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~d~~t~~~~~~~~~~~~~s~~~~~s~~~~ 580 (896)
T KOG2043|consen 501 ERQPVKGDDIDLKGEESSTESVRQLLAKSKREKLTSKSNRKEKETIASQIEADVVTPESQWGLSTKNLASSSDETSKDER 580 (896)
T ss_pred cccccccccccccccCCCCcchhhhhccCcccccccccccccccccchhhhhcccCcccccCcccccccccccccchhhh
Confidence 000000 000 00000001111 112335556666777777776554430
Q ss_pred C--------------------CCccccc-----------c-------------------eeec----ccC--CCCCc--e
Q 048173 232 R--------------------PVSITSV-----------V-------------------FVSK----EFQ--PNGKC--F 253 (359)
Q Consensus 232 ~--------------------~~~i~k~-----------~-------------------~i~~----~~~--~~~~~--p 253 (359)
. +..+.+. . ++.. +.. ..... +
T Consensus 581 ~~~~~~~~~n~~~~~qi~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sr~~~t~~~~e~~s~~~~~~e~~~~r~ 660 (896)
T KOG2043|consen 581 KNFKRLTRSNSDNDAQLNVSSKSSKPKTSQSSSQGESCPDVPTICVRTNYSGASRLASTPAASELRSSSANLNELASKRI 660 (896)
T ss_pred ccccccccccccchhhhhccccccCcccccccccCCCCCCcccccccccccccchhccccchhhhhhhhhccchhhccce
Confidence 0 0011111 0 1111 111 11111 5
Q ss_pred EEEEcccCcchHHHHHHHhcCcEEecCCCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhCCCCCCCCcceecC
Q 048173 254 RITLMNIADDSKKVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFVDESFYMLND 330 (359)
Q Consensus 254 rI~fSgl~~e~kk~klik~LGG~V~~d~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~g~flDEe~Y~L~D 330 (359)
.++|++..+.....+.++.|||.++.+..++||+|+.+++||.|||+||+ |||+++||.+|.+.|.|+||++|+|.|
T Consensus 661 ~~lfs~~~~~~~~k~~~k~lg~s~~ss~~e~Th~i~~rirRT~k~Leai~~G~~ivT~~wL~s~~k~g~~~dek~yil~D 740 (896)
T KOG2043|consen 661 EVLFSDKNDGKNYKLAKKFLGGSVASSDSEATHFIADRIRRTLKFLEAISSGKPLVTPQWLVSSLKSGEKLDEKPYILHD 740 (896)
T ss_pred eeeeeeccCchhhhhHHhhccceeecccccceeeeehhhhccHHHHhhhccCCcccchHHHHHHhhccccccCccccccC
Confidence 68899998866566778899999999999999999999999999999999 999999999999999999999999999
Q ss_pred cccccccCCCHHHHHHHHHhCCCCCCCCC
Q 048173 331 DGYVLKYRSELKDAVLRAKARPGGLLKRI 359 (359)
Q Consensus 331 ~e~E~k~~f~L~~sL~rAr~rp~~LF~Gy 359 (359)
+|.|++|+|+|.++|.||+++| ||.||
T Consensus 741 ~ekEk~~gf~l~ssl~RAr~~p--lL~g~ 767 (896)
T KOG2043|consen 741 EEKEKEFGFRLKSSLLRARADP--LLEGI 767 (896)
T ss_pred HHHHhccCcchhhHHHHhhcch--hhcCc
Confidence 9999999999999999999987 99997
No 2
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2.3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....
Probab=99.46 E-value=3.3e-13 Score=102.95 Aligned_cols=76 Identities=21% Similarity=0.275 Sum_probs=70.6
Q ss_pred CCCCcEEEEEEeeecCCC---CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhcc
Q 048173 60 LNLGKVVAAVIYQIVPAD---TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQV 133 (359)
Q Consensus 60 ~~~g~IVgvi~l~i~~~d---~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~ 133 (359)
.++|+|||++.+...+.+ ...++|..++|+|+|||+|||+.|++++++.+++.|++.|.+.+... +..||+|+
T Consensus 2 ~~~~~ivg~~~~~~~~~~~~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~g~~~i~~~~~~~n~~~~~~~~k~- 80 (83)
T PF00583_consen 2 EEDGQIVGFASLRPPPEPFDHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKRGIKRIYLDVSPDNPAARRFYEKL- 80 (83)
T ss_dssp EETTEEEEEEEEEEEETTTTTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTGHHHHHHHHHT-
T ss_pred cCCCEEEEEEEEEECCCccccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhcCccEEEEEEeCCCHHHHHHHHHc-
Confidence 478999999999998886 47899999999999999999999999999999999999999998885 77999999
Q ss_pred cCcE
Q 048173 134 QDFA 137 (359)
Q Consensus 134 ~GF~ 137 (359)
||+
T Consensus 81 -Gf~ 83 (83)
T PF00583_consen 81 -GFE 83 (83)
T ss_dssp -TEE
T ss_pred -CCC
Confidence 996
No 3
>PRK10314 putative acyltransferase; Provisional
Probab=99.37 E-value=1.2e-12 Score=114.90 Aligned_cols=95 Identities=16% Similarity=0.118 Sum_probs=79.6
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEeccccHHHHhhcccCcEEE
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV-GIRTIFCWDDKESSFFFLKQVQDFASV 139 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~-GI~~I~l~a~~~A~~Fw~K~~~GF~~~ 139 (359)
++|++||++++.....+...++|..+||+|+|||+|||+.|++++++.+++. |...+.+.+...+.+||+|. ||+.+
T Consensus 55 ~~~~~vg~~r~~~~~~~~~~~~i~rv~V~~~~rG~GiG~~Lm~~~~~~~~~~~~~~~i~L~a~~~a~~fY~k~--GF~~~ 132 (153)
T PRK10314 55 KNDELVAYARILKSDDDLEPVVIGRVIVSEALRGEKVGQQLMSKTLESCTRHWPDKPVYLGAQAHLQNFYQSF--GFIPV 132 (153)
T ss_pred ECCEEEEEEEEecCCCCCCCEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHHCCCCcEEEehHHHHHHHHHHC--CCEEC
Confidence 6789999999765433334588999999999999999999999999999885 78899999988889999999 99999
Q ss_pred EeecccCcccCcchhhhhhhcC
Q 048173 140 AEVDTEGRAGRLPLRQKFRKST 161 (359)
Q Consensus 140 ~e~~~~g~~~~~~~~~~m~K~l 161 (359)
++.=.+..|.|.. |.|.+
T Consensus 133 g~~f~~~Gi~h~~----M~~~~ 150 (153)
T PRK10314 133 TEVYEEDGIPHIG----MAREV 150 (153)
T ss_pred CCccccCCCCcHh----hhhhh
Confidence 8764544588887 76643
No 4
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A ....
Probab=99.35 E-value=2.9e-12 Score=99.00 Aligned_cols=71 Identities=23% Similarity=0.358 Sum_probs=61.0
Q ss_pred CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEE
Q 048173 60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFAS 138 (359)
Q Consensus 60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~ 138 (359)
.++|+|||++.+ .++++.++|..++|+|+|||+|||+.|++.+.+.++ ...+++.++..+.+||+|+ ||+.
T Consensus 9 ~~~~~ivG~~~~---~~~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~---~~~i~l~~~~~~~~fY~~~--GF~~ 79 (79)
T PF13508_consen 9 EDDGEIVGFIRL---WPNEDFAYIGYLAVDPEYRGKGIGSKLLNYLLEKAK---SKKIFLFTNPAAIKFYEKL--GFEE 79 (79)
T ss_dssp EETTEEEEEEEE---EETTTEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHT---CSEEEEEEEHHHHHHHHHT--TEEE
T ss_pred EECCEEEEEEEE---EEcCCEEEEEEEEECHHHcCCCHHHHHHHHHHHHcC---CCcEEEEEcHHHHHHHHHC--cCCC
Confidence 479999999996 333458999999999999999999999999988884 4677888888999999999 9984
No 5
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=99.33 E-value=3.6e-12 Score=113.91 Aligned_cols=79 Identities=25% Similarity=0.376 Sum_probs=70.2
Q ss_pred cCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEE
Q 048173 59 FLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFAS 138 (359)
Q Consensus 59 ~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~ 138 (359)
...+|+||||+.+|..++ ++.++|+.+||||+|||+|+|..|++.++..|+++||+++|+++. .+.+||+++ ||+.
T Consensus 45 ~E~~g~viGC~aL~~~~~-~~~gE~~~laV~pd~r~~G~G~~Ll~~~~~~Ar~~gi~~lf~LTt-~~~~~F~~~--GF~~ 120 (153)
T COG1246 45 IERDGKVIGCAALHPVLE-EDLGELRSLAVHPDYRGSGRGERLLERLLADARELGIKELFVLTT-RSPEFFAER--GFTR 120 (153)
T ss_pred eeeCCcEEEEEeecccCc-cCeeeEEEEEECHHhcCCCcHHHHHHHHHHHHHHcCCceeeeeec-ccHHHHHHc--CCeE
Confidence 347999999999884333 356999999999999999999999999999999999999999996 569999999 9997
Q ss_pred EEe
Q 048173 139 VAE 141 (359)
Q Consensus 139 ~~e 141 (359)
+..
T Consensus 121 vd~ 123 (153)
T COG1246 121 VDK 123 (153)
T ss_pred Ccc
Confidence 664
No 6
>PTZ00330 acetyltransferase; Provisional
Probab=99.27 E-value=2.1e-11 Score=102.45 Aligned_cols=79 Identities=18% Similarity=0.238 Sum_probs=70.2
Q ss_pred CCCCcEEEEEEeeecCC----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccC
Q 048173 60 LNLGKVVAAVIYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQD 135 (359)
Q Consensus 60 ~~~g~IVgvi~l~i~~~----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~G 135 (359)
.++|++||.+.+...+. +..+++|..++|+|+|||+|||+.|++++++.+++.|+.++.+.++..|..||+|+ |
T Consensus 58 ~~~~~~vG~~~~~~~~~~~~~~~~~~~i~~~~V~~~~rg~Gig~~l~~~~~~~a~~~~~~~l~l~~n~~a~~~y~k~--G 135 (147)
T PTZ00330 58 SPTQRIVGTASLFVEPKFTRGGKCVGHIEDVVVDPSYRGQGLGRALISDLCEIARSSGCYKVILDCTEDMVAFYKKL--G 135 (147)
T ss_pred eCCCEEEEEEEEEeccccccCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEecChHHHHHHHHC--C
Confidence 36789999998876553 22367899999999999999999999999999999999999999998899999999 9
Q ss_pred cEEEE
Q 048173 136 FASVA 140 (359)
Q Consensus 136 F~~~~ 140 (359)
|+...
T Consensus 136 F~~~~ 140 (147)
T PTZ00330 136 FRACE 140 (147)
T ss_pred CEEec
Confidence 99765
No 7
>PLN02706 glucosamine 6-phosphate N-acetyltransferase
Probab=99.23 E-value=5.5e-11 Score=101.06 Aligned_cols=77 Identities=17% Similarity=0.209 Sum_probs=67.6
Q ss_pred CCcEEEEEEeeecCC----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcE
Q 048173 62 LGKVVAAVIYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFA 137 (359)
Q Consensus 62 ~g~IVgvi~l~i~~~----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~ 137 (359)
+|+|||.+.+.+.+. ..++++|..++|+|+|||+|||+.|++++++.|++.|+++|.+.+.....+||+|+ ||+
T Consensus 63 ~~~ivG~~~~~~~~~~~~~~~~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~~~~~N~~~y~k~--GF~ 140 (150)
T PLN02706 63 SGRIIATGSVFVERKFIRNCGKVGHIEDVVVDSAARGKGLGKKIIEALTEHARSAGCYKVILDCSEENKAFYEKC--GYV 140 (150)
T ss_pred CCcEEEEEEEEEEeecccCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccccHHHHHHC--cCE
Confidence 689999988764431 23567888999999999999999999999999999999999999988888999999 999
Q ss_pred EEE
Q 048173 138 SVA 140 (359)
Q Consensus 138 ~~~ 140 (359)
..+
T Consensus 141 ~~g 143 (150)
T PLN02706 141 RKE 143 (150)
T ss_pred Eeh
Confidence 765
No 8
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A.
Probab=99.22 E-value=2.6e-11 Score=97.87 Aligned_cols=69 Identities=26% Similarity=0.399 Sum_probs=59.5
Q ss_pred cCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCc
Q 048173 59 FLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDF 136 (359)
Q Consensus 59 ~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF 136 (359)
+.++|+|||.+.+. + + +.|.+++|+|+|||+|||++|++++++.|+. |++.+.+..+..|.+||+++ ||
T Consensus 49 ~~~~~~ivG~~~~~--~-~---~~i~~l~v~p~~r~~Gig~~Ll~~~~~~~~~-~~~~l~~~~~~~a~~~y~~~--GF 117 (117)
T PF13673_consen 49 AEEGGEIVGFAWLE--P-D---GEISHLYVLPEYRGRGIGRALLDAAEKEAKD-GIRRLTVEANERARRFYRKL--GF 117 (117)
T ss_dssp EEETTEEEEEEEEE--T-C---EEEEEEEE-GGGTTSSHHHHHHHHHHHHHTT-TCEEEEEEC-HHHHHHHHHT--T-
T ss_pred EEECCEEEEEEEEc--C-C---CeEEEEEEChhhcCCcHHHHHHHHHHHHHHc-CCcEEEEEeCHHHHHHHHhC--CC
Confidence 44888999999975 2 2 3499999999999999999999999999988 99999999888899999999 98
No 9
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=99.22 E-value=2.8e-11 Score=101.29 Aligned_cols=79 Identities=15% Similarity=0.135 Sum_probs=67.5
Q ss_pred CCCCcEEEEEEeeecCC---CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcc
Q 048173 60 LNLGKVVAAVIYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQV 133 (359)
Q Consensus 60 ~~~g~IVgvi~l~i~~~---d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~ 133 (359)
.++|++||.+.+...+. ...+++|..++|+|+|||+|+|+.|++++++.+++.|+..|.+.+.. .|..||+|+
T Consensus 53 ~~~~~ivG~~~~~~~~~~~~~~~~~~i~~l~v~p~~rg~GiG~~Ll~~~~~~a~~~~~~~i~l~~~~~n~~a~~fY~~~- 131 (144)
T PRK10146 53 LLDGEVVGMIGLHLQFHLHHVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVKRHDAHRFYLRE- 131 (144)
T ss_pred EECCEEEEEEEEEecccccccchhheeheeEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHc-
Confidence 46889999999876433 22357899999999999999999999999999999999999988764 599999999
Q ss_pred cCcEEEE
Q 048173 134 QDFASVA 140 (359)
Q Consensus 134 ~GF~~~~ 140 (359)
||+..+
T Consensus 132 -Gf~~~~ 137 (144)
T PRK10146 132 -GYEQSH 137 (144)
T ss_pred -CCchhh
Confidence 998553
No 10
>PRK07922 N-acetylglutamate synthase; Validated
Probab=99.16 E-value=1.4e-10 Score=103.10 Aligned_cols=77 Identities=21% Similarity=0.324 Sum_probs=67.8
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEE
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVA 140 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~ 140 (359)
++|++||.+.+...+. ..++|..++|+|+|||+|||+.|++++++.+++.|++++++.+. +..||+|+ ||..++
T Consensus 53 ~~~~iiG~~~~~~~~~--~~~~i~~l~V~p~~rgkGiG~~Ll~~~~~~a~~~g~~~l~~~~~--~~~fY~k~--GF~~~~ 126 (169)
T PRK07922 53 LDGEVVGCGALHVMWE--DLAEIRTVAVDPAARGRGVGHAIVERLLDVARELGLSRVFVLTF--EVEFFARH--GFVEID 126 (169)
T ss_pred cCCcEEEEEEEeecCC--CceEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCCEEEEEec--cHHHHHHC--CCEECc
Confidence 7889999988776554 45899999999999999999999999999999999999998876 48999999 999876
Q ss_pred eec
Q 048173 141 EVD 143 (359)
Q Consensus 141 e~~ 143 (359)
...
T Consensus 127 ~~~ 129 (169)
T PRK07922 127 GTP 129 (169)
T ss_pred ccc
Confidence 533
No 11
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=99.14 E-value=1.2e-10 Score=113.71 Aligned_cols=71 Identities=21% Similarity=0.298 Sum_probs=65.9
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEE
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVA 140 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~ 140 (359)
++|+|||++.+.. .+|..+||+|+|||+|+|+.|++++++.+++.|+.++++.++..+.+||+|+ ||+.++
T Consensus 13 ~~~~iVG~~~l~~-------~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~i~L~t~~~~~~fYek~--GF~~~~ 83 (297)
T cd02169 13 DAGELIATGSIAG-------NVLKCVAVCPKYQGEGLALKIVSELINKAYEEGIFHLFLFTKPKNAKFFRGL--GFKELA 83 (297)
T ss_pred ECCEEEEEEEecc-------CEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcccHHHHHHHC--CCEEec
Confidence 6799999998631 3599999999999999999999999999999999999999998899999999 999888
No 12
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=99.11 E-value=3e-10 Score=101.90 Aligned_cols=77 Identities=14% Similarity=0.099 Sum_probs=68.2
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcE
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFA 137 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~ 137 (359)
++|++||.+.+....+ ..++|..++|+|+|||+|+|+.|++++++.++++|+.+|.+.+.. .|..||+|+ ||+
T Consensus 106 ~~g~iiG~i~l~~~~~--~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~~g~~~I~l~v~~~N~~A~~~Y~kl--GF~ 181 (191)
T TIGR02382 106 ASGDPRGYVTLRELND--TDARIGLLAVFPGAQSRGIGAELMQTALNWCYARGLTRLRVATQMGNTAALRLYIRS--GAN 181 (191)
T ss_pred cCCeEEEEEEEEecCC--CceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHc--CCc
Confidence 5789999999876554 348999999999999999999999999999999999999988655 499999999 999
Q ss_pred EEEe
Q 048173 138 SVAE 141 (359)
Q Consensus 138 ~~~e 141 (359)
..++
T Consensus 182 ~~~~ 185 (191)
T TIGR02382 182 IEST 185 (191)
T ss_pred cccc
Confidence 7765
No 13
>PRK07757 acetyltransferase; Provisional
Probab=99.11 E-value=3.4e-10 Score=96.44 Aligned_cols=78 Identities=26% Similarity=0.404 Sum_probs=68.4
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEE
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVA 140 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~ 140 (359)
++|++||.+.++..+. ..++|..++|+|+|||+|+|+.|+.++++.+++.|+.++.+.+. +..||+|+ ||+..+
T Consensus 48 ~~~~lvG~~~l~~~~~--~~~~i~~v~V~p~~rg~Glg~~Ll~~l~~~a~~~g~~~i~~~~~--~~~~Y~k~--GF~~~~ 121 (152)
T PRK07757 48 EEGEIVGCCALHILWE--DLAEIRSLAVSEDYRGQGIGRMLVEACLEEARELGVKRVFALTY--QPEFFEKL--GFREVD 121 (152)
T ss_pred ECCEEEEEEEEEeccC--CceEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCeEEEEeC--cHHHHHHC--CCEEcc
Confidence 5789999999876554 45889999999999999999999999999999999999987765 47899999 999987
Q ss_pred eecc
Q 048173 141 EVDT 144 (359)
Q Consensus 141 e~~~ 144 (359)
..+.
T Consensus 122 ~~~~ 125 (152)
T PRK07757 122 KEAL 125 (152)
T ss_pred cccC
Confidence 6444
No 14
>PRK03624 putative acetyltransferase; Provisional
Probab=99.11 E-value=3e-10 Score=92.96 Aligned_cols=77 Identities=22% Similarity=0.217 Sum_probs=65.3
Q ss_pred CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCc
Q 048173 60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDF 136 (359)
Q Consensus 60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF 136 (359)
.++|++||.+.+.. +.+.+.|..++|+|+|||+|+|+.|+..+++.+++.|++.+.+.+.. .|..||+|+ ||
T Consensus 51 ~~~~~~vG~~~~~~---~~~~~~i~~i~v~p~~rg~Gig~~ll~~~~~~~~~~~~~~~~~~~~~~N~~~~~~y~k~--GF 125 (140)
T PRK03624 51 EVGGEVVGTVMGGY---DGHRGWAYYLAVHPDFRGRGIGRALVARLEKKLIARGCPKINLQVREDNDAVLGFYEAL--GY 125 (140)
T ss_pred EcCCcEEEEEEeec---cCCCceEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHc--CC
Confidence 36789999987542 22346789999999999999999999999999999999999887765 489999999 99
Q ss_pred EEEEe
Q 048173 137 ASVAE 141 (359)
Q Consensus 137 ~~~~e 141 (359)
+..+.
T Consensus 126 ~~~~~ 130 (140)
T PRK03624 126 EEQDR 130 (140)
T ss_pred ccccE
Confidence 97664
No 15
>PHA00673 acetyltransferase domain containing protein
Probab=99.07 E-value=6.2e-10 Score=99.75 Aligned_cols=78 Identities=9% Similarity=0.097 Sum_probs=71.4
Q ss_pred CCCcEEEEEEeeecCC----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc--ccHHHHhhccc
Q 048173 61 NLGKVVAAVIYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK--ESSFFFLKQVQ 134 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~--~A~~Fw~K~~~ 134 (359)
++|+|||.+.+.+.|. +..+++|..+.|++++||+|||+.|++++++.|++.|...+++.+-. .+..||.++
T Consensus 62 ~~g~vVG~~~l~~~p~l~~~~~~~~~Ie~l~V~~~~RGqGIG~~Ll~~A~~~Ar~~Gc~~lyis~~p~~~tv~fy~~~-- 139 (154)
T PHA00673 62 RGEELVGFACLLVTPVPHFKGQLIGTTESIFVAAAHRPGGAGMALLRATEALARDLGATGLYVSGPTEGRLVQLLPAA-- 139 (154)
T ss_pred ECCEEEEEEEEEEecCCccCCccEEEEEEEEEChhccCCCHHHHHHHHHHHHHHHCCCCEEEEecCCCccchHHHHhC--
Confidence 6889999999999886 44889999999999999999999999999999999999999998876 599999999
Q ss_pred CcEEEE
Q 048173 135 DFASVA 140 (359)
Q Consensus 135 GF~~~~ 140 (359)
|++...
T Consensus 140 g~~~~~ 145 (154)
T PHA00673 140 GYRETN 145 (154)
T ss_pred Cchhhc
Confidence 998643
No 16
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B ....
Probab=99.04 E-value=9.3e-10 Score=90.64 Aligned_cols=77 Identities=26% Similarity=0.304 Sum_probs=63.5
Q ss_pred cCCCCcEEEEEEeeecCC---CC--ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcc
Q 048173 59 FLNLGKVVAAVIYQIVPA---DT--QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQV 133 (359)
Q Consensus 59 ~~~~g~IVgvi~l~i~~~---d~--~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~ 133 (359)
+.++|+|||.+.++.... +. ..+.|..+||+|+|||+|+|+.|++++++++++.|+..+++++. +.+||.|.
T Consensus 46 ~~~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~v~p~~R~~Gl~~~L~~~~~~~~~~~g~~~~~l~~~--~~~~Y~~~- 122 (127)
T PF13527_consen 46 AEDDGKIVGHVGLIPRRLSVGGKKFKAAYIGDVAVDPEYRGRGLGRQLMRALLERARERGVPFIFLFPS--SPPFYRRF- 122 (127)
T ss_dssp EEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTT-SEEEEE-S--SHHHHHHT-
T ss_pred EEECCEEEEEEEEEEEEEEECCEEEEEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCEEEEecC--ChhhhhcC-
Confidence 447999999888755422 22 46999999999999999999999999999999999999999984 48999999
Q ss_pred cCcEEE
Q 048173 134 QDFASV 139 (359)
Q Consensus 134 ~GF~~~ 139 (359)
||+.+
T Consensus 123 -G~~~~ 127 (127)
T PF13527_consen 123 -GFEYA 127 (127)
T ss_dssp -TEEEE
T ss_pred -CCEEC
Confidence 99863
No 17
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.
Probab=99.03 E-value=1.2e-09 Score=95.53 Aligned_cols=76 Identities=21% Similarity=0.120 Sum_probs=67.0
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcE
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFA 137 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~ 137 (359)
++|++||.+.+...+.+.+..+|..++|+|+|||+|+|+.|++.+++.+++.++.+|.+.+.. .|..||+|+ ||+
T Consensus 47 ~~~~ivG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~L~~~l~~~a~~~~~~~i~~~v~~~N~~a~~ly~k~--G~~ 124 (157)
T TIGR02406 47 EGGEIVGFVSGYLRPDRPDVLFVWQVAVDPRARGKGLARRLLEALLERVACERVRHLETTITPDNQASRALFKAL--ARR 124 (157)
T ss_pred CCCeEEEEEEEEecCCCCCeEEEEEEEEChHhccCcHHHHHHHHHHHHHHhCCCCEEEEEEcCCCHHHHHHHHHh--Ccc
Confidence 567999988776666666778899999999999999999999999999999999999888755 488999999 997
Q ss_pred E
Q 048173 138 S 138 (359)
Q Consensus 138 ~ 138 (359)
.
T Consensus 125 ~ 125 (157)
T TIGR02406 125 R 125 (157)
T ss_pred c
Confidence 5
No 18
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.
Probab=99.02 E-value=9.8e-10 Score=89.20 Aligned_cols=79 Identities=29% Similarity=0.297 Sum_probs=67.1
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcE
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFA 137 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~ 137 (359)
++|++||.+.+.... +.++|..++|+|+|||+|+|+.|++++++.+++.|++++.+.+.. .|..||+|+ ||+
T Consensus 38 ~~~~~vg~~~~~~~~---~~~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~i~~~~~~~n~~~~~~y~~~--Gf~ 112 (131)
T TIGR01575 38 IGGKVVGYAGVQIVL---DEAHILNIAVKPEYQGQGIGRALLRELIDEAKGRGVNEIFLEVRVSNIAAQALYKKL--GFN 112 (131)
T ss_pred cCCeEEEEEEEEecC---CCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCeEEEEEecccHHHHHHHHHc--CCC
Confidence 688999999865433 236799999999999999999999999999999999999887554 478999999 999
Q ss_pred EEEeecc
Q 048173 138 SVAEVDT 144 (359)
Q Consensus 138 ~~~e~~~ 144 (359)
..+....
T Consensus 113 ~~~~~~~ 119 (131)
T TIGR01575 113 EIAIRRN 119 (131)
T ss_pred ccccccc
Confidence 8876443
No 19
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=99.02 E-value=2.1e-09 Score=96.34 Aligned_cols=77 Identities=16% Similarity=0.141 Sum_probs=67.0
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcE
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFA 137 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~ 137 (359)
++|++||.+.+....+ ..++|..++|+|+|||+|+|+.|++.+++.+++.|+++|.+.+.. .|..||+|+ ||+
T Consensus 109 ~~g~~vG~~~l~~~~~--~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~yek~--Gf~ 184 (194)
T PRK10975 109 ASGQIQGFVTLRELND--TDARIGLLAVFPGAQGRGIGARLMQAALNWCQARGLTRLRVATQMGNLAALRLYIRS--GAN 184 (194)
T ss_pred CCCCEEEEEEEEecCC--CceEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCcHHHHHHHHHC--CCe
Confidence 5789999998765443 348899999999999999999999999999999999999887654 489999999 999
Q ss_pred EEEe
Q 048173 138 SVAE 141 (359)
Q Consensus 138 ~~~e 141 (359)
..+.
T Consensus 185 ~~~~ 188 (194)
T PRK10975 185 IEST 188 (194)
T ss_pred EeEE
Confidence 8775
No 20
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A ....
Probab=98.99 E-value=3.1e-09 Score=90.16 Aligned_cols=83 Identities=25% Similarity=0.307 Sum_probs=70.8
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHH-HHcCCcEEEEEecc---ccHHHHhhcccCc
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRL-QSVGIRTIFCWDDK---ESSFFFLKQVQDF 136 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~l-k~~GI~~I~l~a~~---~A~~Fw~K~~~GF 136 (359)
++|++||.+.+....+....+++. +.|.++||++|+|+.|++.+++.| ++.|+++|.+.+.. .|..||+|+ ||
T Consensus 58 ~~g~iiG~~~~~~~~~~~~~~~~~-~~v~~~~~~~gig~~l~~~l~~~af~~~~~~~i~~~v~~~N~~~i~~~~~~--GF 134 (155)
T PF13420_consen 58 EDGKIIGYVSLRDIDPYNHTAELS-IYVSPDYRGKGIGRKLLDELIEYAFKELGIHKIYLEVFSSNEKAINFYKKL--GF 134 (155)
T ss_dssp CTTEEEEEEEEEESSSGTTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHH-HHTT-CEEEEEEETT-HHHHHHHHHT--TE
T ss_pred cCCcEEEEEEEEeeeccCCEEEEe-eEEChhHCCCcHHHHHHHHHHHHhhhccCeEEEEEEEecCCHHHHHHHHhC--CC
Confidence 599999999988776666677666 777799999999999999999999 99999999876665 399999999 99
Q ss_pred EEEEeecccC
Q 048173 137 ASVAEVDTEG 146 (359)
Q Consensus 137 ~~~~e~~~~g 146 (359)
+..++....+
T Consensus 135 ~~~g~~~~~~ 144 (155)
T PF13420_consen 135 EEEGELKDHI 144 (155)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEecEE
Confidence 9999765543
No 21
>PLN02825 amino-acid N-acetyltransferase
Probab=98.99 E-value=1.3e-09 Score=113.55 Aligned_cols=78 Identities=21% Similarity=0.336 Sum_probs=68.6
Q ss_pred cCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEE
Q 048173 59 FLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFAS 138 (359)
Q Consensus 59 ~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~ 138 (359)
..+||+||||+.++..+ +...++|..+||+|+|||+|+|++|++++++.|++.|++++++.+. .+.+||+|+ ||+.
T Consensus 412 ~e~Dg~IVG~aal~~~~-~~~~aEI~~laV~P~yRGkGiG~~LL~~le~~Ar~~G~~~L~Lltt-~a~~fY~k~--GF~~ 487 (515)
T PLN02825 412 VEREGSIIACAALFPFF-EEKCGEVAAIAVSPECRGQGQGDKLLDYIEKKAASLGLEKLFLLTT-RTADWFVRR--GFSE 487 (515)
T ss_pred EEECCEEEEEEEEEeec-CCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeC-cHHHHHHHC--CCEE
Confidence 34789999999876544 3356899999999999999999999999999999999999999884 679999999 9997
Q ss_pred EE
Q 048173 139 VA 140 (359)
Q Consensus 139 ~~ 140 (359)
.+
T Consensus 488 ~~ 489 (515)
T PLN02825 488 CS 489 (515)
T ss_pred eC
Confidence 65
No 22
>COG0456 RimI Acetyltransferases [General function prediction only]
Probab=98.98 E-value=2.6e-09 Score=92.14 Aligned_cols=79 Identities=23% Similarity=0.288 Sum_probs=66.5
Q ss_pred cEEEEEEeeecCCCC---ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCC-cEEEEEeccc---cHHHHhhcccCc
Q 048173 64 KVVAAVIYQIVPADT---QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGI-RTIFCWDDKE---SSFFFLKQVQDF 136 (359)
Q Consensus 64 ~IVgvi~l~i~~~d~---~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI-~~I~l~a~~~---A~~Fw~K~~~GF 136 (359)
+++|.+......... ..++|..+||+|+|||+|||+.|+.++++.+++.|+ ..+.|.++.+ |..||+|. ||
T Consensus 72 ~~~G~~~~~~~~~~~~~~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~~~~~~~~L~V~~~N~~Ai~lY~~~--GF 149 (177)
T COG0456 72 KVVGFLLVRVVDGRPSADHEGHIYNLAVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRESNEAAIGLYRKL--GF 149 (177)
T ss_pred ceeEEEEEEEecCCccccCccEEEEEEEChHhhcCCHHHHHHHHHHHHHHhcCCCceEEEEEecCChHHHHHHHHc--CC
Confidence 689988864222211 258899999999999999999999999999999997 8999998874 99999999 99
Q ss_pred EEEEeecc
Q 048173 137 ASVAEVDT 144 (359)
Q Consensus 137 ~~~~e~~~ 144 (359)
.+++....
T Consensus 150 ~~~~~~~~ 157 (177)
T COG0456 150 EVVKIRKN 157 (177)
T ss_pred EEEeeehh
Confidence 99886444
No 23
>PRK05279 N-acetylglutamate synthase; Validated
Probab=98.95 E-value=1.7e-09 Score=109.62 Aligned_cols=81 Identities=21% Similarity=0.408 Sum_probs=69.0
Q ss_pred CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEE
Q 048173 60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASV 139 (359)
Q Consensus 60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~ 139 (359)
.++|++||++.+..... +..++|..++|+|+|||+|+|+.|++++++.+++.|+.++++.+ ..|.+||+|+ ||+..
T Consensus 340 ~~dg~iVG~~~~~~~~~-~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~l~l~~-~~a~~fY~k~--GF~~~ 415 (441)
T PRK05279 340 ERDGLIIGCAALYPFPE-EKMGEMACLAVHPDYRGSGRGERLLKRIEQRARQLGLKRLFVLT-TRTAHWFLER--GFVPV 415 (441)
T ss_pred EECCEEEEEEEEEEcCC-CCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEec-chHHHHHHHC--cCEEC
Confidence 46889999987654332 35689999999999999999999999999999999999998766 4689999999 99988
Q ss_pred Eeecc
Q 048173 140 AEVDT 144 (359)
Q Consensus 140 ~e~~~ 144 (359)
+....
T Consensus 416 g~~~~ 420 (441)
T PRK05279 416 DVDDL 420 (441)
T ss_pred ChhhC
Confidence 86443
No 24
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=98.95 E-value=2.4e-09 Score=108.46 Aligned_cols=78 Identities=21% Similarity=0.380 Sum_probs=68.8
Q ss_pred CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEE
Q 048173 60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASV 139 (359)
Q Consensus 60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~ 139 (359)
.++|++||++.+...+ ++..++|..++|+|+|||+|+|+.|++++++.|++.|++++++++. .+.+||+|+ ||+..
T Consensus 328 ~~dg~iVG~~~~~~~~-~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~A~~~G~~~l~v~~~-~a~~fY~k~--GF~~~ 403 (429)
T TIGR01890 328 EHDGNIIGCAALYPYA-EEDCGEMACLAVSPEYQDGGRGERLLAHIEDRARQMGISRLFVLTT-RTGHWFRER--GFQTA 403 (429)
T ss_pred EECCEEEEEEEEEecC-CCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEeec-chHHHHHHC--CCEEC
Confidence 3688999999876543 3467899999999999999999999999999999999999988765 578999999 99988
Q ss_pred Ee
Q 048173 140 AE 141 (359)
Q Consensus 140 ~e 141 (359)
++
T Consensus 404 g~ 405 (429)
T TIGR01890 404 SV 405 (429)
T ss_pred Ch
Confidence 75
No 25
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=98.94 E-value=4.6e-09 Score=89.07 Aligned_cols=76 Identities=26% Similarity=0.291 Sum_probs=65.3
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcE
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFA 137 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~ 137 (359)
++|++||.+.+..... .+.+..++|+|+|||+|+|+.+++.+++.+++.|++.+.+.+.. .|..||+|+ ||+
T Consensus 47 ~~~~~vG~~~~~~~~~---~~~~~~i~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~~~~~~~~~N~~a~~~y~k~--Gf~ 121 (146)
T PRK09491 47 VNGQMAAFAITQVVLD---EATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYESL--GFN 121 (146)
T ss_pred ECCeEEEEEEEEeecC---ceEEEEEEECHHHccCCHHHHHHHHHHHHHHHCCCcEEEEEEccCCHHHHHHHHHc--CCE
Confidence 6789999988654332 25688999999999999999999999999999999999887644 499999999 999
Q ss_pred EEEe
Q 048173 138 SVAE 141 (359)
Q Consensus 138 ~~~e 141 (359)
..+.
T Consensus 122 ~~~~ 125 (146)
T PRK09491 122 EVTI 125 (146)
T ss_pred Eeee
Confidence 7775
No 26
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=98.94 E-value=2.7e-09 Score=105.74 Aligned_cols=74 Identities=15% Similarity=0.188 Sum_probs=67.5
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEE
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVA 140 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~ 140 (359)
++|+|||++.+. + ..|+.+||+|+|||+|+|+.|+.+|++.+++.|+.++++.+.....+||+++ ||..++
T Consensus 38 ~~~~lVg~g~l~--g-----~~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~~G~~~l~l~Tk~~~~~fy~kl--GF~~i~ 108 (332)
T TIGR00124 38 EDEEIIGCGGIA--G-----NVIKCVAIDESLRGEGLALQLMTELENLAYELGRFHLFIFTKPEYAALFEYC--GFKTLA 108 (332)
T ss_pred ECCEEEEEEEEe--c-----CEEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEECchHHHHHHHc--CCEEee
Confidence 788999999862 1 2499999999999999999999999999999999999999998889999999 999988
Q ss_pred eec
Q 048173 141 EVD 143 (359)
Q Consensus 141 e~~ 143 (359)
+++
T Consensus 109 ~~~ 111 (332)
T TIGR00124 109 EAK 111 (332)
T ss_pred eec
Confidence 754
No 27
>PRK13688 hypothetical protein; Provisional
Probab=98.93 E-value=4.1e-09 Score=93.81 Aligned_cols=76 Identities=24% Similarity=0.211 Sum_probs=59.8
Q ss_pred CCCCcEEEEEEeeecC--------CCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhh
Q 048173 60 LNLGKVVAAVIYQIVP--------ADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLK 131 (359)
Q Consensus 60 ~~~g~IVgvi~l~i~~--------~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K 131 (359)
.+++++||++.+.... .+.++++|..++|+|+|||+|||++|++.+ ++.++. +.+.+...|..||+|
T Consensus 51 ~~~~~~VG~~~l~~~dg~~~~~~~~~~~~~~L~~l~V~p~~rgkGiG~~Ll~~a----~~~~~~-~~~~~~~~a~~FY~k 125 (156)
T PRK13688 51 YYGDSLVARMSLYKKGGVEEPYFEDTQDYLELWKLEVLPKYQNRGYGEMLVDFA----KSFQLP-IKTIARNKSKDFWLK 125 (156)
T ss_pred EECCEEEEEEEEEecCCcccccccCCCCeEEEEEEEECHHHcCCCHHHHHHHHH----HHhCCe-EEEEeccchHHHHHh
Confidence 3788999988763321 234678999999999999999999999754 445664 556666679999999
Q ss_pred cccCcEEEEee
Q 048173 132 QVQDFASVAEV 142 (359)
Q Consensus 132 ~~~GF~~~~e~ 142 (359)
+ ||+..+..
T Consensus 126 ~--GF~~~~~~ 134 (156)
T PRK13688 126 L--GFTPVEYK 134 (156)
T ss_pred C--CCEEeEEe
Confidence 9 99998865
No 28
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=98.93 E-value=2.9e-09 Score=100.98 Aligned_cols=81 Identities=22% Similarity=0.336 Sum_probs=70.0
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhcccCcE
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQVQDFA 137 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~~GF~ 137 (359)
++|++||++.+.+.+. ...++|..++|+|+|||+|+|+.|++++++.+++.|++++++.++.. |..||+|+ ||.
T Consensus 165 ~~g~iVG~~~~~~~~~-~~~~eI~~i~V~P~yRG~GiG~~Ll~~l~~~a~~~g~~~l~~~~~~~n~~a~~ly~k~--GF~ 241 (266)
T TIGR03827 165 DGGKIIALASAEMDPE-NGNAEMTDFATLPEYRGKGLAKILLAAMEKEMKEKGIRTAYTIARASSYGMNITFARL--GYA 241 (266)
T ss_pred ECCEEEEEEEEecCCC-CCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEeehhhcchhHHHHHHHc--CCc
Confidence 6889999998755443 35689999999999999999999999999999999999999988764 67899999 999
Q ss_pred EEEeecc
Q 048173 138 SVAEVDT 144 (359)
Q Consensus 138 ~~~e~~~ 144 (359)
..+....
T Consensus 242 ~~G~l~n 248 (266)
T TIGR03827 242 YGGTLVN 248 (266)
T ss_pred cccEEee
Confidence 8886443
No 29
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=98.91 E-value=7e-09 Score=88.03 Aligned_cols=80 Identities=15% Similarity=0.125 Sum_probs=65.0
Q ss_pred CCCcEEEEEEeeecCC--CCceeeeeEEEeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEecc---ccHHHHhhccc
Q 048173 61 NLGKVVAAVIYQIVPA--DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQS-VGIRTIFCWDDK---ESSFFFLKQVQ 134 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~--d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~K~~~ 134 (359)
++|++||.+.+...+. ....+++. ++|+|+|||+|+|+.|++.+.+.+++ .|+.++.+.+.. .|..||+|+
T Consensus 58 ~~~~~vG~~~~~~~~~~~~~~~~~~~-~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~v~~~N~~a~~~y~k~-- 134 (162)
T PRK10140 58 IDGDVVGHLTIDVQQRPRRSHVADFG-ICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIKVYKKY-- 134 (162)
T ss_pred ECCEEEEEEEEecccccccceEEEEE-EEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEEcCCHHHHHHHHHC--
Confidence 5789999998875432 22334443 89999999999999999999999998 799999877753 589999999
Q ss_pred CcEEEEeec
Q 048173 135 DFASVAEVD 143 (359)
Q Consensus 135 GF~~~~e~~ 143 (359)
||+..+...
T Consensus 135 GF~~~g~~~ 143 (162)
T PRK10140 135 GFEIEGTGK 143 (162)
T ss_pred CCEEEeecc
Confidence 999888633
No 30
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=98.88 E-value=9e-09 Score=96.97 Aligned_cols=78 Identities=18% Similarity=0.260 Sum_probs=65.9
Q ss_pred CCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcEE
Q 048173 62 LGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFAS 138 (359)
Q Consensus 62 ~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~~ 138 (359)
+|++||.+.+...+.+...++|..++|+|+|||+|||+.|+.++++.+++.|+..|.+.+.. .|..||+|+ ||+.
T Consensus 208 ~~~~vG~~~~~~~~~~~~~~~i~~~~V~p~~rg~GiG~~ll~~~~~~~~~~g~~~v~l~v~~~N~~a~~~y~k~--GF~~ 285 (292)
T TIGR03448 208 PGELLGFHWTKVHPDEPALGEVYVVGVDPAAQGRGLGDALTLIGLHHLAARGLPAVMLYVEADNEAAVRTYEKL--GFTV 285 (292)
T ss_pred CCcEEEEEEEEecCCCCceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeCCCHHHHHHHHHc--CCEE
Confidence 68999986555444334567888899999999999999999999999999999999888755 489999999 9997
Q ss_pred EEe
Q 048173 139 VAE 141 (359)
Q Consensus 139 ~~e 141 (359)
...
T Consensus 286 ~~~ 288 (292)
T TIGR03448 286 AEV 288 (292)
T ss_pred ccc
Confidence 654
No 31
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=98.87 E-value=5.9e-09 Score=110.29 Aligned_cols=79 Identities=23% Similarity=0.319 Sum_probs=68.1
Q ss_pred cCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEE
Q 048173 59 FLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFAS 138 (359)
Q Consensus 59 ~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~ 138 (359)
+.++|+|||++.+..... .+++|..++|+|+|||+|||+.|++++++.+++.|++.|.+.+. +..||+|+ ||+.
T Consensus 508 a~~~g~IVG~~~l~~~~~--~~~~I~~i~V~P~~rGkGIGk~Ll~~l~~~ak~~g~~~i~l~~~--a~~FYek~--GF~~ 581 (614)
T PRK12308 508 AEHHGEVTGCASLYIYDS--GLAEIRSLGVEAGWQVQGQGSALVQYLVEKARQMAIKKVFVLTR--VPEFFMKQ--GFSP 581 (614)
T ss_pred EEECCEEEEEEEEEEcCC--CeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEeeC--cHHHHHHC--CCEE
Confidence 347889999998765433 45889999999999999999999999999999999999998764 58999999 9998
Q ss_pred EEeec
Q 048173 139 VAEVD 143 (359)
Q Consensus 139 ~~e~~ 143 (359)
.+..+
T Consensus 582 ~~~~~ 586 (614)
T PRK12308 582 TSKSL 586 (614)
T ss_pred CCccc
Confidence 77543
No 32
>PF00533 BRCT: BRCA1 C Terminus (BRCT) domain; InterPro: IPR001357 The BRCT domain (after the C_terminal domain of a breast cancer susceptibility protein) is found predominantly in proteins involved in cell cycle checkpoint functions responsive to DNA damage [], for example as found in the breast cancer DNA-repair protein BRCA1. The domain is an approximately 100 amino acid tandem repeat, which appears to act as a phospho-protein binding domain []. A chitin biosynthesis protein from yeast also seems to belong to this group. ; GO: 0005622 intracellular; PDB: 3L46_A 3AL3_A 3AL2_A 1WF6_A 3II6_X 2NTE_B 3FA2_A 2R1Z_A 2COK_A 2K7F_A ....
Probab=98.86 E-value=7.6e-09 Score=78.63 Aligned_cols=65 Identities=25% Similarity=0.489 Sum_probs=55.4
Q ss_pred CceEEEEcccCcchH--HHHHHHhcCcEEecC-CCCeeEEEeCCC-CCcHHHHhhcc---cccCHHHHHHHH
Q 048173 251 KCFRITLMNIADDSK--KVHLTKNLRGAVTSD-GITSTHVVAGKV-RKTLNFFTALS---WIVSPSWLKESF 315 (359)
Q Consensus 251 ~~prI~fSgl~~e~k--k~klik~LGG~V~~d-~~~~THLVa~~~-~RT~KfL~AIa---wIVsp~WL~eS~ 315 (359)
++..|.++++....+ ..++++.+||.+..+ .+.+||||++.. .++.|+..+.. +||+|+||.+|+
T Consensus 7 ~g~~f~i~~~~~~~~~~l~~~i~~~GG~v~~~~~~~~thvI~~~~~~~~~k~~~~~~~~i~iV~~~Wi~~ci 78 (78)
T PF00533_consen 7 EGCTFCISGFDSDEREELEQLIKKHGGTVSNSFSKKTTHVIVGNPNKRTKKYKAAIANGIPIVSPDWIEDCI 78 (78)
T ss_dssp TTEEEEESSTSSSHHHHHHHHHHHTTEEEESSSSTTSSEEEESSSHCCCHHHHHHHHTTSEEEETHHHHHHH
T ss_pred CCEEEEEccCCCCCHHHHHHHHHHcCCEEEeecccCcEEEEeCCCCCccHHHHHHHHCCCeEecHHHHHHhC
Confidence 566788877766533 358899999999877 889999999988 89999999988 999999999995
No 33
>PRK09831 putative acyltransferase; Provisional
Probab=98.84 E-value=7e-09 Score=88.78 Aligned_cols=69 Identities=17% Similarity=0.163 Sum_probs=58.4
Q ss_pred CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEE
Q 048173 60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASV 139 (359)
Q Consensus 60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~ 139 (359)
.++|++||.+.+.. .+|..++|+|+|||+|||+.|+.++++.+.+ +.+.++..|.+||+|+ ||+..
T Consensus 59 ~~~~~iiG~~~~~~-------~~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~-----l~v~~~~~a~~~Y~k~--Gf~~~ 124 (147)
T PRK09831 59 VINAQPVGFITCIE-------HYIDMLFVDPEYTRRGVASALLKPLIKSESE-----LTVDASITAKPFFERY--GFQTV 124 (147)
T ss_pred EECCEEEEEEEehh-------ceeeeEEECHHHcCCCHHHHHHHHHHHHhhh-----eEeecchhhHHHHHHC--CCEEe
Confidence 47899999887531 4588999999999999999999999999887 3445566799999999 99998
Q ss_pred Eee
Q 048173 140 AEV 142 (359)
Q Consensus 140 ~e~ 142 (359)
++.
T Consensus 125 g~~ 127 (147)
T PRK09831 125 KQQ 127 (147)
T ss_pred ecc
Confidence 873
No 34
>KOG3139 consensus N-acetyltransferase [General function prediction only]
Probab=98.77 E-value=3.5e-08 Score=89.13 Aligned_cols=75 Identities=19% Similarity=0.261 Sum_probs=64.5
Q ss_pred EEEEEEeeecCCC-CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcEEEE
Q 048173 65 VVAAVIYQIVPAD-TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFASVA 140 (359)
Q Consensus 65 IVgvi~l~i~~~d-~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~~~~ 140 (359)
-||++..-...+. ..++||-.+||+++|||+|||++|++++.+.+++.|...|++.+.. .|..+|+++ ||...+
T Consensus 68 ~VGai~ck~~~~r~~~rgyi~mLaV~~e~Rg~GIg~aLvr~aId~m~~~g~~eVvLeTe~~n~~A~~LY~sL--GF~r~~ 145 (165)
T KOG3139|consen 68 TVGAIVCKLDTHRNTLRGYIAMLAVDSEYRGQGIGKALVRKAIDAMRSRGYSEVVLETEVTNLSALRLYESL--GFKRDK 145 (165)
T ss_pred eEEEEEEeccccCCcceEEEEEEEechhhccccHHHHHHHHHHHHHHHCCCcEEEEeccccchHHHHHHHhc--CceEec
Confidence 5888774333332 2579999999999999999999999999999999999999998877 499999999 999765
Q ss_pred e
Q 048173 141 E 141 (359)
Q Consensus 141 e 141 (359)
.
T Consensus 146 r 146 (165)
T KOG3139|consen 146 R 146 (165)
T ss_pred c
Confidence 4
No 35
>cd00027 BRCT Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo/hetero BRCT multimers, BRCT-non-BRCT interactions, and interactions within DNA strand breaks.
Probab=98.74 E-value=3.7e-08 Score=71.46 Aligned_cols=64 Identities=25% Similarity=0.428 Sum_probs=50.4
Q ss_pred eEEEEcccC-cc--hHHHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHh
Q 048173 253 FRITLMNIA-DD--SKKVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFG 316 (359)
Q Consensus 253 prI~fSgl~-~e--~kk~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k 316 (359)
.+|.++|.. .. ....++++.+||.+..+ ...+||||++......++..|+. +||+++||.+|.+
T Consensus 2 ~~~~i~g~~~~~~~~~l~~~i~~~Gg~v~~~~~~~~thvI~~~~~~~~~~~~~~~~~~~iV~~~Wi~~~~~ 72 (72)
T cd00027 2 LTFVITGDLPSEERDELKELIEKLGGKVTSSVSKKTTHVIVGSDAGPKKLLKAIKLGIPIVTPEWLLDCLK 72 (72)
T ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCEEeccccCCceEEEECCCCCchHHHHHHHcCCeEecHHHHHHHhC
Confidence 467888886 22 33357889999999988 55999999998776665666655 9999999999974
No 36
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=98.72 E-value=5e-08 Score=102.29 Aligned_cols=79 Identities=20% Similarity=0.166 Sum_probs=65.8
Q ss_pred CCCcEEEEEEeeecC---CC-CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcc
Q 048173 61 NLGKVVAAVIYQIVP---AD-TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQV 133 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~---~d-~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~ 133 (359)
++|+|||.+.+.... .+ +..++|..++|+|+|||+|||+.|+.++++.+++.|+.+|.+.+.. .|..||+|+
T Consensus 132 ~~g~IVG~~~~~~~~~~~~d~~~~~~i~~l~V~P~~Rg~GIG~~Ll~~l~e~a~~~G~~~i~L~V~~~N~~Ai~fY~kl- 210 (547)
T TIGR03103 132 ASGAIIGTVMGVDHRKAFNDPEHGSSLWCLAVDPQAAHPGVGEALVRALAEHFQSRGCAYMDLSVMHDNEQAIALYEKL- 210 (547)
T ss_pred CCCeEEEEEEEEeccccccCCCCCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCHHHHHHHHHC-
Confidence 478999998753321 12 2347899999999999999999999999999999999999887764 489999999
Q ss_pred cCcEEEEe
Q 048173 134 QDFASVAE 141 (359)
Q Consensus 134 ~GF~~~~e 141 (359)
||+.+..
T Consensus 211 -Gf~~~~~ 217 (547)
T TIGR03103 211 -GFRRIPV 217 (547)
T ss_pred -CCEEeeE
Confidence 9997653
No 37
>PRK15130 spermidine N1-acetyltransferase; Provisional
Probab=98.67 E-value=1.2e-07 Score=83.59 Aligned_cols=79 Identities=18% Similarity=0.120 Sum_probs=65.5
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHH-HcCCcEEEEEecc---ccHHHHhhcccCc
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQ-SVGIRTIFCWDDK---ESSFFFLKQVQDF 136 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk-~~GI~~I~l~a~~---~A~~Fw~K~~~GF 136 (359)
.+|++||.+.+....+....++| .++|+++|||+|+|+.++..+.+.+. ++|+++|++.+.. .|..||+|. ||
T Consensus 64 ~~g~~iG~~~~~~~~~~~~~~~~-~~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~~s~~~yek~--GF 140 (186)
T PRK15130 64 CDGEKAGLVELVEINHVHRRAEF-QIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKL--GF 140 (186)
T ss_pred ECCEEEEEEEEEeecCCCCeEEE-EEEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCHHHHHHHHHC--CC
Confidence 57899999987665544445666 49999999999999999999999886 5899999877544 599999999 99
Q ss_pred EEEEee
Q 048173 137 ASVAEV 142 (359)
Q Consensus 137 ~~~~e~ 142 (359)
+..+..
T Consensus 141 ~~~~~~ 146 (186)
T PRK15130 141 EVEGEL 146 (186)
T ss_pred EEEEEE
Confidence 988763
No 38
>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera
Probab=98.67 E-value=1.2e-07 Score=65.79 Aligned_cols=59 Identities=19% Similarity=0.178 Sum_probs=53.6
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEE
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFC 119 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l 119 (359)
+++++||.+.+...+.....++|..++|+++|||+|+|+.++.++.+.+++.|++++.+
T Consensus 6 ~~~~~ig~~~~~~~~~~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 64 (65)
T cd04301 6 DDGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRL 64 (65)
T ss_pred cCCEEEEEEEEEecCCCCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHHcCCcEEEe
Confidence 56899999998777765677999999999999999999999999999999999999876
No 39
>COG3153 Predicted acetyltransferase [General function prediction only]
Probab=98.67 E-value=6.5e-08 Score=88.16 Aligned_cols=86 Identities=19% Similarity=0.278 Sum_probs=71.5
Q ss_pred ceeeccCCCCcEEEEEEeeecCCC---CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHh
Q 048173 54 YKVVSFLNLGKVVAAVIYQIVPAD---TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFL 130 (359)
Q Consensus 54 ~~~~~~~~~g~IVgvi~l~i~~~d---~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~ 130 (359)
..|-.+.++|+|||.|++.-..-+ ..---+.-+||+|+|||||||+.|+.+.++.|+..|...|+++++ .+||.
T Consensus 46 ~LslVA~d~g~vvG~Il~s~v~~~g~~~~~~~LaPLaV~p~~qg~GIG~~Lvr~~le~a~~~G~~~v~vlGd---p~YY~ 122 (171)
T COG3153 46 TLSLVAEDDGEVVGHILFSPVTVGGEELGWLGLAPLAVDPEYQGQGIGSALVREGLEALRLAGASAVVVLGD---PTYYS 122 (171)
T ss_pred ceeEEEeeCCEEEEEEEEeEEEecCcccceEEEEeEEEchhhcCCcHHHHHHHHHHHHHHHCCCCEEEEecC---ccccc
Confidence 344556688999999997665554 233447889999999999999999999999999999999999998 58999
Q ss_pred hcccCcEEEEeecc
Q 048173 131 KQVQDFASVAEVDT 144 (359)
Q Consensus 131 K~~~GF~~~~e~~~ 144 (359)
+. ||+......-
T Consensus 123 rf--GF~~~~~~~l 134 (171)
T COG3153 123 RF--GFEPAAGAKL 134 (171)
T ss_pred cc--CcEEcccccc
Confidence 99 9998776333
No 40
>smart00292 BRCT breast cancer carboxy-terminal domain.
Probab=98.64 E-value=1.5e-07 Score=69.87 Aligned_cols=68 Identities=26% Similarity=0.362 Sum_probs=50.8
Q ss_pred CceEEEEcc-cCcc--hHHHHHHHhcCcEEecCCC--CeeEEEeCCCCCcHH-HHhhcc---cccCHHHHHHHHhCC
Q 048173 251 KCFRITLMN-IADD--SKKVHLTKNLRGAVTSDGI--TSTHVVAGKVRKTLN-FFTALS---WIVSPSWLKESFGEG 318 (359)
Q Consensus 251 ~~prI~fSg-l~~e--~kk~klik~LGG~V~~d~~--~~THLVa~~~~RT~K-fL~AIa---wIVsp~WL~eS~k~g 318 (359)
++.+|.++| +... ....++++.+||.+..... .+||+|+....-... +..+.. +||+++||.+|.+.+
T Consensus 4 ~g~~~~~~g~~~~~~~~~l~~~i~~~Gg~~~~~~~~~~~thvi~~~~~~~~~~~~~~~~~~~~iV~~~Wi~~~~~~~ 80 (80)
T smart00292 4 KGKVFVITGKFDKNERDELKELIEALGGKVTSSLSSKTTTHVIVGSPEGGKLELLLAIALGIPIVTEDWLLDCLKAG 80 (80)
T ss_pred CCeEEEEeCCCCCccHHHHHHHHHHcCCEEecccCccceeEEEEcCCCCccHHHHHHHHcCCCCccHHHHHHHHHCc
Confidence 456788888 4433 2335788999999998844 899999987654333 455554 999999999999864
No 41
>PRK10514 putative acetyltransferase; Provisional
Probab=98.62 E-value=8.9e-08 Score=80.58 Aligned_cols=70 Identities=16% Similarity=0.153 Sum_probs=53.6
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEE
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVA 140 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~ 140 (359)
++|++||.+.+. + .+|..++|+|+|||+|+|++|++.+++.++. +.......+..|..||+|+ ||+..+
T Consensus 57 ~~~~~iG~~~~~---~----~~~~~~~v~p~~rgkGig~~Ll~~~~~~~~~--i~~~v~~~N~~a~~~yek~--Gf~~~~ 125 (145)
T PRK10514 57 ERDQPVGFMLLS---G----GHMEALFVDPDVRGCGVGRMLVEHALSLHPE--LTTDVNEQNEQAVGFYKKM--GFKVTG 125 (145)
T ss_pred cCCcEEEEEEEe---c----CcEeEEEECHHhccCCHHHHHHHHHHHhccc--cEEEeecCCHHHHHHHHHC--CCEEec
Confidence 578999988752 1 3477899999999999999999999987543 2222222334599999999 999877
Q ss_pred e
Q 048173 141 E 141 (359)
Q Consensus 141 e 141 (359)
.
T Consensus 126 ~ 126 (145)
T PRK10514 126 R 126 (145)
T ss_pred c
Confidence 5
No 42
>KOG4362 consensus Transcriptional regulator BRCA1 [Replication, recombination and repair; Transcription]
Probab=98.61 E-value=4.9e-08 Score=104.05 Aligned_cols=108 Identities=18% Similarity=0.223 Sum_probs=75.2
Q ss_pred cCCCCCceEEEEcccCcchHH--HHHHHhcCcEEecC-CCCeeEEEeC-----CCCCcHHHHhhcc---cccCHHHHHHH
Q 048173 246 FQPNGKCFRITLMNIADDSKK--VHLTKNLRGAVTSD-GITSTHVVAG-----KVRKTLNFFTALS---WIVSPSWLKES 314 (359)
Q Consensus 246 ~~~~~~~prI~fSgl~~e~kk--~klik~LGG~V~~d-~~~~THLVa~-----~~~RT~KfL~AIa---wIVsp~WL~eS 314 (359)
....++..+.+.+|++|+.+. .+.... ++... ++.+||+|+. .+.||+|++.+|+ ||++.+|+.+|
T Consensus 472 ~~~~~kk~~~~~s~l~p~ek~~v~~~a~~---t~~k~~~~~~thvi~~~~~~g~c~rTlk~~~gil~gkwi~~~~w~~~s 548 (684)
T KOG4362|consen 472 THRFKKKLVLLVSGLTPSEKQLVEKFAVD---TISKFWIEPVTHVIASTDLEGACLRTLKVLMGILRGKWILSYDWVLAS 548 (684)
T ss_pred ccCcccceeeeeccCCcchHHHHHHHHHH---HHhhccCCCceeeeeecccccchhhhHHHHHHhhcCceeeeHHHHHHH
Confidence 344556667778999996443 122211 22233 7889999995 5789999999999 99999999999
Q ss_pred HhCCCCCCCCcceecCcccccccCCCHHHHHHHHHhCCCCCCCC
Q 048173 315 FGEGRFVDESFYMLNDDGYVLKYRSELKDAVLRAKARPGGLLKR 358 (359)
Q Consensus 315 ~k~g~flDEe~Y~L~D~e~E~k~~f~L~~sL~rAr~rp~~LF~G 358 (359)
++.++|++|++|||.-+--...-+..... +.|-.++ .+||+|
T Consensus 549 ~k~~~~~~eepfEl~~d~~~~~~~~~~~~-~~a~s~~-~kLf~g 590 (684)
T KOG4362|consen 549 LKLRKWVSEEPFELQIDVPGAREGPKEKR-LRAESYK-PKLFEG 590 (684)
T ss_pred HHhcCCCCCCCeeEeecccCcccCccccc-ccccccC-cchhcC
Confidence 99999999999999854332222222222 2333333 589998
No 43
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=98.60 E-value=1.1e-07 Score=89.51 Aligned_cols=74 Identities=12% Similarity=0.166 Sum_probs=59.1
Q ss_pred CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCc
Q 048173 60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDF 136 (359)
Q Consensus 60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF 136 (359)
.++|+|||.+.+.....+. ++|..++|+|+|||+|||+.|++++++.+. ..+.+++.. .|..||+++ ||
T Consensus 52 ~~~~~~vG~~~~~~~~~~~--~~~~~l~V~p~~rg~GiG~~Ll~~~~~~~~----~~~~~~~~~~n~~a~~fy~~~--Gf 123 (292)
T TIGR03448 52 VDSDPIVGYANLVPARGTD--PAMAELVVHPAHRRRGIGRALIRALLAKGG----GRLRVWAHGDLPAARALASRL--GL 123 (292)
T ss_pred EECCEEEEEEEEEcCCCCc--ceEEEEEECHhhcCCCHHHHHHHHHHHhcc----CceEEEEcCCCHHHHHHHHHC--CC
Confidence 3678999999876654432 679999999999999999999999999865 344444443 489999999 99
Q ss_pred EEEEe
Q 048173 137 ASVAE 141 (359)
Q Consensus 137 ~~~~e 141 (359)
..+..
T Consensus 124 ~~~~~ 128 (292)
T TIGR03448 124 VPTRE 128 (292)
T ss_pred EEccE
Confidence 97764
No 44
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT). This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.
Probab=98.60 E-value=3.8e-07 Score=73.36 Aligned_cols=58 Identities=21% Similarity=0.261 Sum_probs=48.7
Q ss_pred eeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcEEEEe
Q 048173 81 AEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFASVAE 141 (359)
Q Consensus 81 a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~~~~e 141 (359)
++|..+.++|+|||+|+|+.++.++.+.+.+.|..-. +.... .|..||+|. ||+.+.+
T Consensus 22 g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~g~~~~-l~v~~~N~~s~~ly~kl--Gf~~~~~ 82 (86)
T PF08445_consen 22 GEIGGVYTLPEHRRRGLGSALVAALARELLERGKTPF-LYVDADNEASIRLYEKL--GFREIEE 82 (86)
T ss_dssp CCEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTTSEEE-EEEETT-HHHHHHHHHC--T-EEEEE
T ss_pred cEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCcEE-EEEECCCHHHHHHHHHc--CCEEEEE
Confidence 7799999999999999999999999999999998654 44332 499999999 9998865
No 45
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional
Probab=98.59 E-value=3.4e-07 Score=80.32 Aligned_cols=78 Identities=10% Similarity=0.047 Sum_probs=66.0
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEecc---ccHHHHhhcccCc
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQS-VGIRTIFCWDDK---ESSFFFLKQVQDF 136 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~K~~~GF 136 (359)
++|++||.+.++...++.+.++|.. .|+|+|||+|+|+.++.++.+.+.+ .|+++|.+.+.. .|..+++|+ ||
T Consensus 74 ~~~~~iG~~~l~~~~~~~~~~~ig~-~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~~S~~v~ek~--Gf 150 (179)
T PRK10151 74 KEDELIGVLSFNRIEPLNKTAYIGY-WLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPASNQVALRN--GF 150 (179)
T ss_pred ECCEEEEEEEEEeeccCCCceEEEE-EEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCHHHHHHHHHC--CC
Confidence 4689999998776655556688876 6999999999999999999998875 689999877654 499999999 99
Q ss_pred EEEEe
Q 048173 137 ASVAE 141 (359)
Q Consensus 137 ~~~~e 141 (359)
+..+.
T Consensus 151 ~~~g~ 155 (179)
T PRK10151 151 TLEGC 155 (179)
T ss_pred EEEeE
Confidence 98876
No 46
>PHA01807 hypothetical protein
Probab=98.59 E-value=1.5e-07 Score=83.84 Aligned_cols=71 Identities=14% Similarity=0.127 Sum_probs=58.5
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeE---EEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhc
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPL---AAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQ 132 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~---~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~ 132 (359)
++|++||.+.+.... +..+++|.. ++|+|+|||+|||+.|++++++.+++.|+..|.+.++.. |..||++-
T Consensus 60 ~dg~lvG~~~l~~~~-~~~~~~i~~l~~lYV~pe~RG~GiG~~Ll~~~~~~Ar~~G~~~l~l~v~~~n~~a~~~y~~~ 136 (153)
T PHA01807 60 RDGKLAGIAVLVFED-DPHVGPCLGVQWQYVLPEYRNAGVAREFLRELIRLAGEGNLPLIAFSHREGEGRYTIHYRRV 136 (153)
T ss_pred ECCEEEEEEEEEcCC-CcceeeeccceeEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCcHHHHHHHHhc
Confidence 688999998865444 333445443 799999999999999999999999999999998877774 88999875
No 47
>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A.
Probab=98.58 E-value=3.2e-07 Score=78.31 Aligned_cols=85 Identities=16% Similarity=0.168 Sum_probs=68.2
Q ss_pred cCCCCcEEEEEEeeecCC----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEeccc---cHHHHh
Q 048173 59 FLNLGKVVAAVIYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV-GIRTIFCWDDKE---SSFFFL 130 (359)
Q Consensus 59 ~~~~g~IVgvi~l~i~~~----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~-GI~~I~l~a~~~---A~~Fw~ 130 (359)
+..||+++|.+.+.-..+ ++....|..++|+++|||+|+|+.++.++.+.+.+. ++.+|.+.+... +...|+
T Consensus 53 ~~~dg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~~~~~~~~ 132 (152)
T PF13523_consen 53 AEDDGEPIGYFEIYWPDEDYDADDGDRGIHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNTRAIRLYE 132 (152)
T ss_dssp EEETTEEEEEEEEEEGGGSS---TTEEEEEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-HHHHHHHH
T ss_pred EEECCEEEEEEEEecccccccCCCCEEEEeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCHHHHHHHH
Confidence 458999999887643222 344556999999999999999999999999999987 899999988774 999999
Q ss_pred hcccCcEEEEeeccc
Q 048173 131 KQVQDFASVAEVDTE 145 (359)
Q Consensus 131 K~~~GF~~~~e~~~~ 145 (359)
|+ ||+.+++.+..
T Consensus 133 k~--GF~~~g~~~~~ 145 (152)
T PF13523_consen 133 KA--GFRKVGEFEFP 145 (152)
T ss_dssp HT--T-EEEEEEEES
T ss_pred Hc--CCEEeeEEECC
Confidence 99 99999987653
No 48
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.58 E-value=1.6e-07 Score=91.65 Aligned_cols=72 Identities=10% Similarity=0.050 Sum_probs=62.2
Q ss_pred CCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEec-----cccHHHHhhcccCc
Q 048173 62 LGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDD-----KESSFFFLKQVQDF 136 (359)
Q Consensus 62 ~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~-----~~A~~Fw~K~~~GF 136 (359)
++.+||.+.+...+ ...+|..++|++.+||+|||+.|+.++++.|++.|+.+|++... ..|..||+|+ ||
T Consensus 242 d~givG~~~~~~~~---~~~~I~~l~vs~r~~grGig~~Ll~~l~~~a~~~G~~~i~l~v~~~~~N~~A~~fY~~~--GF 316 (320)
T TIGR01686 242 DSGIIGIFVFEKKE---GNLFIDDLCMSCRALGRGVETRMLRWLFEQALDLGNHNARLYYRRTERNMPFLSFYEQI--GF 316 (320)
T ss_pred CCceEEEEEEEecC---CcEEEEEEEEcHhHhcCcHHHHHHHHHHHHHHHcCCCeEEEEEeeCCCchHHHHHHHHc--CC
Confidence 66799998865432 34789999999999999999999999999999999999988653 3599999999 99
Q ss_pred EE
Q 048173 137 AS 138 (359)
Q Consensus 137 ~~ 138 (359)
+.
T Consensus 317 ~~ 318 (320)
T TIGR01686 317 ED 318 (320)
T ss_pred cc
Confidence 84
No 49
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family. The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.
Probab=98.57 E-value=1.8e-07 Score=98.00 Aligned_cols=79 Identities=15% Similarity=0.156 Sum_probs=69.0
Q ss_pred CCCcEEEEEEeeecCCC------CceeeeeEEEe-----------ccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc
Q 048173 61 NLGKVVAAVIYQIVPAD------TQYAEVPLAAV-----------SSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK 123 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d------~~~a~I~~~AV-----------~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~ 123 (359)
+++.+||-+.+.....+ ..-|.|+.+.| +++|||+|+|+.|++++++.|++.|+++|.+.++.
T Consensus 421 ~~~~l~G~lrlr~~~~~~~~~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar~~G~~~i~v~s~~ 500 (522)
T TIGR01211 421 KNDILIGFLRLRFPSEPAHRKEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAAEEGSEKILVISGI 500 (522)
T ss_pred CCCeEEEEEEEecCcccccccccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHHHCCCCEEEEeeCc
Confidence 45789999998776542 23588999985 49999999999999999999999999999999998
Q ss_pred ccHHHHhhcccCcEEEEe
Q 048173 124 ESSFFFLKQVQDFASVAE 141 (359)
Q Consensus 124 ~A~~Fw~K~~~GF~~~~e 141 (359)
.|..||+|+ ||...++
T Consensus 501 ~A~~FY~kl--Gf~~~g~ 516 (522)
T TIGR01211 501 GVREYYRKL--GYELDGP 516 (522)
T ss_pred hHHHHHHHC--CCEEEcc
Confidence 999999999 9998775
No 50
>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A ....
Probab=98.54 E-value=5.7e-07 Score=74.49 Aligned_cols=74 Identities=18% Similarity=0.230 Sum_probs=62.9
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHH-HHcCCcEEEEEeccc---cHHHHhhcccCc
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRL-QSVGIRTIFCWDDKE---SSFFFLKQVQDF 136 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~l-k~~GI~~I~l~a~~~---A~~Fw~K~~~GF 136 (359)
+++++||.+.+....+....++|+ +.|.++|||+|+|+.++..+.+.+ +..|+.+|.+.+... |..+++|+ ||
T Consensus 65 ~~~~~iG~i~~~~~~~~~~~~eig-~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N~~s~~~~~k~--GF 141 (142)
T PF13302_consen 65 DDGEIIGFIGLYNIDKNNNWAEIG-YWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADNEASRRLLEKL--GF 141 (142)
T ss_dssp TTTEEEEEEEEEEEETTTTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-HHHHHHHHHT--T-
T ss_pred cCCceEEEeeeeecccCCCccccc-cchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCCHHHHHHHHHc--CC
Confidence 557899999985554455679999 779999999999999999999999 799999998877763 99999999 99
Q ss_pred E
Q 048173 137 A 137 (359)
Q Consensus 137 ~ 137 (359)
+
T Consensus 142 ~ 142 (142)
T PF13302_consen 142 E 142 (142)
T ss_dssp E
T ss_pred C
Confidence 6
No 51
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=98.52 E-value=5.7e-07 Score=80.05 Aligned_cols=78 Identities=9% Similarity=0.052 Sum_probs=64.6
Q ss_pred CCCcEEEEEEeeecCCCC-ceeeeeEEEeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEecc---ccHHHHhhcccC
Q 048173 61 NLGKVVAAVIYQIVPADT-QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQS-VGIRTIFCWDDK---ESSFFFLKQVQD 135 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~-~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~K~~~G 135 (359)
++|++||.+.++...... +.++|. +.|+++|||+|+|+.+++.+.+.+.+ +|+++|.+.+.. .|..|++|+ |
T Consensus 84 ~~~~~iG~i~l~~~~~~~~~~~eig-~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~~S~~l~ek~--G 160 (194)
T PRK10809 84 DEKEIIGVANFSNVVRGSFHACYLG-YSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNKRSGDLLARL--G 160 (194)
T ss_pred CCCeEEEEEEEEeecCCCeeeEEEE-EEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCHHHHHHHHHC--C
Confidence 467999999987554322 345555 67999999999999999999999987 699999888866 499999999 9
Q ss_pred cEEEEe
Q 048173 136 FASVAE 141 (359)
Q Consensus 136 F~~~~e 141 (359)
|+..+.
T Consensus 161 f~~~g~ 166 (194)
T PRK10809 161 FEKEGY 166 (194)
T ss_pred CcEEee
Confidence 997665
No 52
>PF12738 PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2WT8_C 3EF1_A 3EF0_A.
Probab=98.51 E-value=1.2e-07 Score=71.36 Aligned_cols=57 Identities=21% Similarity=0.352 Sum_probs=44.1
Q ss_pred eEEEEcccCcch--HHHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc---cccCHHH
Q 048173 253 FRITLMNIADDS--KKVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS---WIVSPSW 310 (359)
Q Consensus 253 prI~fSgl~~e~--kk~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa---wIVsp~W 310 (359)
.+|++||+.+.+ ...++++.+||.+..+ ..++||||+ ....+.|+-.|.. +||+|+|
T Consensus 1 ~~i~~sg~~~~~~~~l~~~i~~~Gg~~~~~lt~~~THLI~-~~~~~~K~~~A~~~gi~vV~~~W 63 (63)
T PF12738_consen 1 VVICFSGFSGKERSQLRKLIEALGGKYSKDLTKKTTHLIC-SSPEGKKYRKAKEWGIPVVSPDW 63 (63)
T ss_dssp -EEEEEEB-TTTCCHHHHHHHCTT-EEESSSSTT-SEEEE-ES--HHHHHHHHHCTSEEEEHHH
T ss_pred CEEEECCCCHHHHHHHHHHHHHCCCEEeccccCCceEEEE-eCCCcHHHHHHHHCCCcEECCCC
Confidence 378999998863 3458899999999998 889999999 4568888888877 9999999
No 53
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase. Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.
Probab=98.50 E-value=6.4e-07 Score=75.92 Aligned_cols=77 Identities=10% Similarity=0.068 Sum_probs=63.7
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEecc---ccHHHHhhcccCc
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQS-VGIRTIFCWDDK---ESSFFFLKQVQDF 136 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I~l~a~~---~A~~Fw~K~~~GF 136 (359)
++|++||++.+.........++|..+ ++|.+| +|+|+.++.++++.+.+ .|+++|.+.+.. .|..||+|+ ||
T Consensus 58 ~~g~~vG~~~~~~~~~~~~~~~~g~~-~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~~v~~~N~~s~~~y~k~--Gf 133 (156)
T TIGR03585 58 QESRPIGVISFTDINLVHKSAFWGIY-ANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSLEVLEFNNKALKLYEKF--GF 133 (156)
T ss_pred ECCEEEEEEEEEecChhhCeEEEEEE-eChhhh-cCchHHHHHHHHHHHHhhCCeeEEEEEEeccCHHHHHHHHHc--CC
Confidence 67999999987655533345777765 999999 99999999999999884 799999876544 499999999 99
Q ss_pred EEEEe
Q 048173 137 ASVAE 141 (359)
Q Consensus 137 ~~~~e 141 (359)
+..+.
T Consensus 134 ~~~g~ 138 (156)
T TIGR03585 134 EREGV 138 (156)
T ss_pred eEeee
Confidence 98875
No 54
>PRK01346 hypothetical protein; Provisional
Probab=98.49 E-value=4.9e-07 Score=90.12 Aligned_cols=79 Identities=11% Similarity=0.052 Sum_probs=65.8
Q ss_pred cCCCCcEEEEEEeeecC---C-C--CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhc
Q 048173 59 FLNLGKVVAAVIYQIVP---A-D--TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQ 132 (359)
Q Consensus 59 ~~~~g~IVgvi~l~i~~---~-d--~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~ 132 (359)
+.++|+|||.+.+.... + + ...++|..++|+|+|||+|||+.|+.++++.+++.|+..+++++.. .+||+|.
T Consensus 52 a~~~~~lvg~~~~~~~~~~~~~~~~~~~~~i~~v~V~P~~RgrGig~~Ll~~~l~~a~~~g~~~~~L~~~~--~~~Y~r~ 129 (411)
T PRK01346 52 AFDGDEVVGTAGAFDLRLTVPGGAVLPAAGVTAVTVAPTHRRRGLLTALMREQLRRIRERGEPVAALTASE--GGIYGRF 129 (411)
T ss_pred EEECCEEEEEEEEeccccccCCCCccceeEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCcEEEEECCc--hhhHhhC
Confidence 34678999988764321 1 1 1458899999999999999999999999999999999999998875 6899999
Q ss_pred ccCcEEEEe
Q 048173 133 VQDFASVAE 141 (359)
Q Consensus 133 ~~GF~~~~e 141 (359)
||+....
T Consensus 130 --Gf~~~~~ 136 (411)
T PRK01346 130 --GYGPATY 136 (411)
T ss_pred --CCeeccc
Confidence 9997664
No 55
>PRK10562 putative acetyltransferase; Provisional
Probab=98.48 E-value=4.9e-07 Score=76.89 Aligned_cols=69 Identities=19% Similarity=0.209 Sum_probs=53.9
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEe---ccccHHHHhhcccCcE
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWD---DKESSFFFLKQVQDFA 137 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a---~~~A~~Fw~K~~~GF~ 137 (359)
++|++||.+.+.. . ..|..++|+|+|||+|+|+.|++.+++.+. ++.+.+ +..|..||+|+ ||+
T Consensus 55 ~~~~~iG~~~~~~--~----~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~-----~~~~~v~~~N~~s~~~y~k~--Gf~ 121 (145)
T PRK10562 55 EDGKLLGFVSVLE--G----RFVGALFVAPKAVRRGIGKALMQHVQQRYP-----HLSLEVYQKNQRAVNFYHAQ--GFR 121 (145)
T ss_pred ECCEEEEEEEEee--c----cEEEEEEECHHHcCCCHHHHHHHHHHhhCC-----eEEEEEEcCChHHHHHHHHC--CCE
Confidence 5689999987531 1 358889999999999999999999988543 443333 33589999999 999
Q ss_pred EEEee
Q 048173 138 SVAEV 142 (359)
Q Consensus 138 ~~~e~ 142 (359)
.++..
T Consensus 122 ~~~~~ 126 (145)
T PRK10562 122 IVDSA 126 (145)
T ss_pred Ecccc
Confidence 98853
No 56
>KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism]
Probab=98.47 E-value=5.1e-07 Score=81.23 Aligned_cols=78 Identities=15% Similarity=0.113 Sum_probs=67.7
Q ss_pred CCcEEEEEEeeecCC---CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEe---ccccHHHHhhcccC
Q 048173 62 LGKVVAAVIYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWD---DKESSFFFLKQVQD 135 (359)
Q Consensus 62 ~g~IVgvi~l~i~~~---d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a---~~~A~~Fw~K~~~G 135 (359)
+++++|-+.+..++. ..+.-+|--++|.|+|||+|+|+.|++.+.++|.++|..++.-.+ +..|..||+|. |
T Consensus 63 ~~~~aGf~~yf~~ystW~~k~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G~~rv~w~vldwN~rAi~lY~k~--g 140 (163)
T KOG3216|consen 63 GEVVAGFALYFNNYSTWLGKQGIYLEDLYVREQYRGKGIGSKLLKFVAEEADKLGTPRVEWVVLDWNHRAILLYEKV--G 140 (163)
T ss_pred CCceeEEeeeecccccccccceEEEEeeEecchhcccChHHHHHHHHHHHHHHcCCCcEEEEEeccchhHHHHHHHh--C
Confidence 778999888776655 448899999999999999999999999999999999999994444 44699999999 9
Q ss_pred cEEEEe
Q 048173 136 FASVAE 141 (359)
Q Consensus 136 F~~~~e 141 (359)
++..++
T Consensus 141 aq~l~~ 146 (163)
T KOG3216|consen 141 AQDLKE 146 (163)
T ss_pred ccccce
Confidence 997766
No 57
>KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=98.44 E-value=4.9e-07 Score=80.08 Aligned_cols=80 Identities=21% Similarity=0.193 Sum_probs=70.6
Q ss_pred cCCCCcEEEEEEeeecCC----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhccc
Q 048173 59 FLNLGKVVAAVIYQIVPA----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQ 134 (359)
Q Consensus 59 ~~~~g~IVgvi~l~i~~~----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~ 134 (359)
....++|||.+.|.|.-- -+-.+-|--..||++||||++|+.|++.|...++++|.-+|.+.-...-.+||+|+
T Consensus 60 d~~s~~vigtatL~IE~KfIh~~g~rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~lgcYKi~LdC~~~nv~FYeKc-- 137 (150)
T KOG3396|consen 60 DKESEKVIGTATLFIERKFIHGCGSRGHIEDVVVDSEYRGKQLGKLLVETLVDLAKSLGCYKIILDCDPKNVKFYEKC-- 137 (150)
T ss_pred eCCcCeEEEEEEEEEehhhhhcccccCceeEEEeChhhhhhHHhHHHHHHHHHHHHhcCcEEEEEecchhhhhHHHHc--
Confidence 346789999999988654 22456689999999999999999999999999999999999999999999999999
Q ss_pred CcEEEE
Q 048173 135 DFASVA 140 (359)
Q Consensus 135 GF~~~~ 140 (359)
||+..+
T Consensus 138 G~s~~~ 143 (150)
T KOG3396|consen 138 GYSNAG 143 (150)
T ss_pred Cccccc
Confidence 998654
No 58
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=98.41 E-value=8.8e-07 Score=79.15 Aligned_cols=93 Identities=18% Similarity=0.200 Sum_probs=77.4
Q ss_pred CCcEEEEEEeeecCCCCceee--eeEEEeccCccccChHHHHHHHHHHHHHHcC-CcEEEEEeccccHHHHhhcccCcEE
Q 048173 62 LGKVVAAVIYQIVPADTQYAE--VPLAAVSSIYQHKGVGRLLYLKLRKRLQSVG-IRTIFCWDDKESSFFFLKQVQDFAS 138 (359)
Q Consensus 62 ~g~IVgvi~l~i~~~d~~~a~--I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~G-I~~I~l~a~~~A~~Fw~K~~~GF~~ 138 (359)
+|++||+.+| .+++.++.+ |+..+|++++||+|+|+.|+.++.+.+.+.. =+.+.+-+-.--..||... ||+.
T Consensus 58 ~g~LvAyaRL--l~~~~~~~~~~iGRV~v~~~~RG~glG~~Lm~~AL~~~~~~~p~~~v~l~AQahLq~fYa~~--GFv~ 133 (155)
T COG2153 58 DGELVAYARL--LPPGAEYEEVSIGRVIVSPAARGQGLGQQLMEKALETAGREWPDKPVYLGAQAHLQDFYASF--GFVR 133 (155)
T ss_pred CCeEEEEEec--CCCCCCcCceeeeeEEECHhhhccchhHHHHHHHHHHHHhhCCCCCeEEehHHHHHHHHHHh--CcEE
Confidence 8999999996 444444444 9999999999999999999999999999888 4556666666689999999 9999
Q ss_pred EEeecccCcccCcchhhhhhhcCC
Q 048173 139 VAEVDTEGRAGRLPLRQKFRKSTE 162 (359)
Q Consensus 139 ~~e~~~~g~~~~~~~~~~m~K~l~ 162 (359)
.+|.=.+..|.|.. |+....
T Consensus 134 ~~e~yledGIpHv~----M~r~~~ 153 (155)
T COG2153 134 VGEEYLEDGIPHVG----MIREVI 153 (155)
T ss_pred cCchhhcCCCCchh----hhhccc
Confidence 99877766799998 776543
No 59
>KOG3397 consensus Acetyltransferases [General function prediction only]
Probab=98.28 E-value=1.6e-06 Score=79.79 Aligned_cols=79 Identities=14% Similarity=0.179 Sum_probs=71.5
Q ss_pred CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEE
Q 048173 60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASV 139 (359)
Q Consensus 60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~ 139 (359)
....+|||-.+|.-.....+-..+-...|+.+.||+|+|+.|++.+|..++..|++++++-+..+ .+||+.. ||+.-
T Consensus 63 E~~~~VigH~rLS~i~n~~~al~VEsVVV~k~~RG~GFGk~lMk~~E~~~R~~gf~~~yLsT~DQ-~~FYe~l--GYe~c 139 (225)
T KOG3397|consen 63 EENDEVLGHSRLSHLPNRDHALWVESVVVKKDQRGLGFGKFLMKSTEKWMREKGFNEAYLSTDDQ-CRFYESL--GYEKC 139 (225)
T ss_pred ccccceeeeeccccCCCCCceeEEEEEEEehhhccccHHHHHHHHHHHHHHHhhhhheeeecccc-hhhhhhh--ccccc
Confidence 56678999999888887777788999999999999999999999999999999999999999976 8999999 99965
Q ss_pred Ee
Q 048173 140 AE 141 (359)
Q Consensus 140 ~e 141 (359)
+.
T Consensus 140 ~P 141 (225)
T KOG3397|consen 140 DP 141 (225)
T ss_pred Cc
Confidence 54
No 60
>COG3393 Predicted acetyltransferase [General function prediction only]
Probab=98.12 E-value=8.4e-06 Score=78.92 Aligned_cols=79 Identities=19% Similarity=0.251 Sum_probs=66.2
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEE-e-ccccHHHHhhcccCcEE
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCW-D-DKESSFFFLKQVQDFAS 138 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~-a-~~~A~~Fw~K~~~GF~~ 138 (359)
++|+||+...- ......+++|.-.+++|+|||||+++.++.+|.+.+-..|-..++.. + +..|..=|+|. ||+.
T Consensus 184 ~d~~iVa~A~t--~a~~~~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eGk~~~L~~~~~N~~A~~iY~ri--GF~~ 259 (268)
T COG3393 184 GDGKIVAKAET--AAENPAYAQINGVYTHPEYRGKGYATALVATLAAKLLAEGKIPCLFVNSDNPVARRIYQRI--GFRE 259 (268)
T ss_pred cCCcEEEeeec--cccCCcceEEEEEEcCHHHccccHHHHHHHHHHHHHHhCCCeeEEEEecCCHHHHHHHHHh--CCee
Confidence 56699999883 44455899999999999999999999999999999999996655444 3 33699999999 9999
Q ss_pred EEeec
Q 048173 139 VAEVD 143 (359)
Q Consensus 139 ~~e~~ 143 (359)
+++..
T Consensus 260 ~g~~~ 264 (268)
T COG3393 260 IGEFR 264 (268)
T ss_pred cceEE
Confidence 98754
No 61
>KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only]
Probab=98.11 E-value=5.7e-06 Score=76.81 Aligned_cols=78 Identities=21% Similarity=0.241 Sum_probs=66.2
Q ss_pred cEEEEEEeeecCC-CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcEEE
Q 048173 64 KVVAAVIYQIVPA-DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFASV 139 (359)
Q Consensus 64 ~IVgvi~l~i~~~-d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~~~ 139 (359)
++||-..+.+.-. +....|++++-|.+.|||+|||+.|++.|+..+.....++|++-++. .|.+||.++ ||.+.
T Consensus 103 ~~vgf~~Frf~vd~g~~vlYcyEvqv~~~yR~kGiGk~LL~~l~~~a~~~~~~kVmLTVf~~N~~al~Fy~~~--gf~~~ 180 (202)
T KOG2488|consen 103 KLVGFTMFRFTVDTGDPVLYCYEVQVASAYRGKGIGKFLLDTLEKLADSRHMRKVMLTVFSENIRALGFYHRL--GFVVD 180 (202)
T ss_pred ceeeEEEEEEEcccCCeEEEEEEEeehhhhhccChHHHHHHHHHHHHHHHHhhhheeeeecccchhHHHHHHc--CcccC
Confidence 7888766555444 55789999999999999999999999999999999999999777666 499999999 99987
Q ss_pred Eeec
Q 048173 140 AEVD 143 (359)
Q Consensus 140 ~e~~ 143 (359)
.+-+
T Consensus 181 ~~sp 184 (202)
T KOG2488|consen 181 EESP 184 (202)
T ss_pred CCCC
Confidence 6433
No 62
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=98.02 E-value=5e-05 Score=69.33 Aligned_cols=83 Identities=17% Similarity=0.144 Sum_probs=64.8
Q ss_pred CCCCcEEEEEEeeecCCCC--ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhccc
Q 048173 60 LNLGKVVAAVIYQIVPADT--QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQ 134 (359)
Q Consensus 60 ~~~g~IVgvi~l~i~~~d~--~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~ 134 (359)
.++|+|+|-+.+....+-. +..--....|+|++||+|||++|+++|..++..+|++.++..... .|..|+++.
T Consensus 59 ~~~g~v~G~a~~~~fr~r~ay~~tve~SiYv~~~~~g~GiG~~Ll~~Li~~~~~~g~~~lva~I~~~n~aSi~lh~~~-- 136 (169)
T COG1247 59 EEDGKVLGYASAGPFRERPAYRHTVELSIYLDPAARGKGLGKKLLQALITEARALGVRELVAGIESDNLASIALHEKL-- 136 (169)
T ss_pred cCCCeEEEEEEeeeccCccccceEEEEEEEECcccccccHHHHHHHHHHHHHHhCCeEEEEEEEcCCCcHhHHHHHHC--
Confidence 4669999988855444422 222345688999999999999999999999999999998554443 499999999
Q ss_pred CcEEEEeecc
Q 048173 135 DFASVAEVDT 144 (359)
Q Consensus 135 GF~~~~e~~~ 144 (359)
||+..+..+.
T Consensus 137 GF~~~G~~~~ 146 (169)
T COG1247 137 GFEEVGTFPE 146 (169)
T ss_pred CCEEeccccc
Confidence 9999884333
No 63
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=97.97 E-value=3.1e-05 Score=61.65 Aligned_cols=67 Identities=13% Similarity=0.218 Sum_probs=51.2
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhc
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQ 132 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~ 132 (359)
++|+.+|.+.+.. +++.-.|.|..|+|++||||+|+.|++++.+.|++.|.+-+-.-.+ +..|+.|+
T Consensus 6 ~~g~~~a~l~Y~~---~~~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~~~kv~p~C~y--~~~~~~~h 72 (78)
T PF14542_consen 6 DDGEEIAELTYRE---DGGVIVITHTEVPPELRGQGIAKKLVEAALDYARENGLKVVPTCSY--VAKYFRRH 72 (78)
T ss_dssp SSTTEEEEEEEEE---SSSEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHTT-EEEETSHH--HHHHHHH-
T ss_pred ECCEEEEEEEEEe---CCCEEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCEEEEECHH--HHHHHHhC
Confidence 5689999999865 3344669999999999999999999999999999999965533222 36677665
No 64
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=97.95 E-value=2.8e-05 Score=76.54 Aligned_cols=78 Identities=18% Similarity=0.230 Sum_probs=68.9
Q ss_pred ccCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcE
Q 048173 58 SFLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFA 137 (359)
Q Consensus 58 ~~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~ 137 (359)
...++++||||+-+ .+. -|++.||++.+||.|+.=.|+.+|...+-++|..++|+.+-.....||..+ ||.
T Consensus 41 ~~~~~~~iiacGsi--aGn-----vikcvAvs~s~qGeGl~lkl~TeLin~ay~~g~~hLFiyTKp~~~~lFk~~--GF~ 111 (352)
T COG3053 41 IYRDNEEIIACGSI--AGN-----VIKCVAVSESLQGEGLALKLVTELINLAYERGRTHLFIYTKPEYAALFKQC--GFS 111 (352)
T ss_pred EEcCCCcEEEeccc--ccc-----eeEEEEechhcccccHHHHHHHHHHHHHHHcCCceEEEEechhHHHHHHhC--Cce
Confidence 34477999999982 333 399999999999999999999999999999999999999999999999999 999
Q ss_pred EEEeecc
Q 048173 138 SVAEVDT 144 (359)
Q Consensus 138 ~~~e~~~ 144 (359)
.+..++.
T Consensus 112 ~i~~~~~ 118 (352)
T COG3053 112 EIASAEN 118 (352)
T ss_pred EeeccCc
Confidence 8876543
No 65
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
Probab=97.90 E-value=5.2e-05 Score=64.56 Aligned_cols=77 Identities=19% Similarity=0.146 Sum_probs=66.0
Q ss_pred CCcEEEEEEeeecCC--CCceeeeeEEEeccCccccChHHHHHHHHHHHHHH-cCCcEEEEEeccc---cHHHHhhcccC
Q 048173 62 LGKVVAAVIYQIVPA--DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQS-VGIRTIFCWDDKE---SSFFFLKQVQD 135 (359)
Q Consensus 62 ~g~IVgvi~l~i~~~--d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I~l~a~~~---A~~Fw~K~~~G 135 (359)
++++||.+.++..++ +.+.++|.... +|+|+|+|+|+..+.++.+.+-+ +|+++|.+.+... |....+|+ |
T Consensus 76 ~~~~iG~~~~~~~~~~~~~~~~~ig~~l-~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~~S~rv~ek~--G 152 (187)
T COG1670 76 DGELIGVIGLSDIDRAANGDLAEIGYWL-DPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEASIRVYEKL--G 152 (187)
T ss_pred CCeEEEEEEEEEeccccccceEEEEEEE-ChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCHHHHHHHHHc--C
Confidence 569999999887763 45667776665 99999999999999999999887 9999998877763 99999999 9
Q ss_pred cEEEEe
Q 048173 136 FASVAE 141 (359)
Q Consensus 136 F~~~~e 141 (359)
|+..+.
T Consensus 153 f~~eg~ 158 (187)
T COG1670 153 FRLEGE 158 (187)
T ss_pred Chhhhh
Confidence 998775
No 66
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]
Probab=97.81 E-value=2.1e-05 Score=57.01 Aligned_cols=47 Identities=21% Similarity=0.242 Sum_probs=42.1
Q ss_pred eeE-EEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCc
Q 048173 83 VPL-AAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDF 136 (359)
Q Consensus 83 I~~-~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF 136 (359)
+.. ++|+|+|||+|||+.|++++++.++..|+. ....+..||.+. ||
T Consensus 83 ~~~~l~v~~~~rg~Gig~~Ll~~~~~~~~~~g~~-----~~~~~~~~~~~~--~~ 130 (156)
T COG0454 83 LDARLYVLPEYRGKGIGSALLEAALEWARKRGIS-----LNRLALEVYEKN--GF 130 (156)
T ss_pred ceeeEEecchhhccchHHHHHHHHHHHHHHcCce-----ehHHHHHHHHhc--CC
Confidence 444 999999999999999999999999999987 555689999999 98
No 67
>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B.
Probab=97.79 E-value=6.6e-05 Score=69.98 Aligned_cols=60 Identities=23% Similarity=0.265 Sum_probs=41.5
Q ss_pred ceeeeeEEEeccCccccChHHHHHHHHHHHH-------------------------HHcCCcEE-EEEecc-ccHHHHhh
Q 048173 79 QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRL-------------------------QSVGIRTI-FCWDDK-ESSFFFLK 131 (359)
Q Consensus 79 ~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~l-------------------------k~~GI~~I-~l~a~~-~A~~Fw~K 131 (359)
..+-|-.+||||++|++|+|+.+++.+++.+ +..++.-+ ...+.. +=-.||.|
T Consensus 89 ~g~RIvRIAvhP~~q~~G~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~vDylGtSFG~t~~Ll~FW~k 168 (196)
T PF13718_consen 89 SGARIVRIAVHPDLQRMGYGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRPPGVDYLGTSFGATPELLKFWQK 168 (196)
T ss_dssp EEEEEEEEEE-CCC-SSSHHHHHHHHHHHT-----------------------------S-SEEEEEEE--HHHHHHHHC
T ss_pred cceeEEEEEEChhhhcCCHHHHHHHHHHHHHhhhcccccccccccccccccccccccccCCCEEEeccCCCHHHHHHHHH
Confidence 3466889999999999999999999999999 47788877 333332 34699999
Q ss_pred cccCcEEEE
Q 048173 132 QVQDFASVA 140 (359)
Q Consensus 132 ~~~GF~~~~ 140 (359)
+ ||..+.
T Consensus 169 ~--gf~pv~ 175 (196)
T PF13718_consen 169 N--GFVPVY 175 (196)
T ss_dssp T--T-EEEE
T ss_pred C--CcEEEE
Confidence 9 999765
No 68
>KOG3138 consensus Predicted N-acetyltransferase [General function prediction only]
Probab=97.78 E-value=6.1e-05 Score=69.82 Aligned_cols=83 Identities=16% Similarity=0.148 Sum_probs=65.9
Q ss_pred eeeeeEEEeccCccccChHHHHHHHHHHHHHHcC-CcEEEEEecc---ccHHHHhhcccCcEEEEeecccCcccCcchhh
Q 048173 80 YAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVG-IRTIFCWDDK---ESSFFFLKQVQDFASVAEVDTEGRAGRLPLRQ 155 (359)
Q Consensus 80 ~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~G-I~~I~l~a~~---~A~~Fw~K~~~GF~~~~e~~~~g~~~~~~~~~ 155 (359)
..||-++.|.+.||.+|||+.|++.+.+.+.... ++.|++.+.. .|..||++. ||+.+...+.+-.+...+
T Consensus 89 ~~yi~~Lgvl~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~Y~~~--gF~~~~~~~~~y~~~~~~--- 163 (187)
T KOG3138|consen 89 VIYILSLGVLPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIEFYEKR--GFEIVERLKNYYSILGPP--- 163 (187)
T ss_pred eeEEEeecccHHHHhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCcHHHHHHhc--CceEeeccccccccccCc---
Confidence 4899999999999999999999999999999999 8888666544 699999999 999999866643222222
Q ss_pred hhhhcCCCCcEEEeccccc
Q 048173 156 KFRKSTEPERVVIDGCSRE 174 (359)
Q Consensus 156 ~m~K~l~~~~~m~~~l~~~ 174 (359)
+.-+|.++++..
T Consensus 164 -------~~~~l~~~~~~~ 175 (187)
T KOG3138|consen 164 -------DDSFLRKLLIHG 175 (187)
T ss_pred -------chhhhhhheecC
Confidence 225666677654
No 69
>KOG3226 consensus DNA repair protein [Replication, recombination and repair]
Probab=97.74 E-value=2.6e-05 Score=78.69 Aligned_cols=82 Identities=17% Similarity=0.270 Sum_probs=65.8
Q ss_pred CCceEEEEcccCc-c-hHHHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhc--c-cccCHHHHHHHHhCCCCCCC
Q 048173 250 GKCFRITLMNIAD-D-SKKVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTAL--S-WIVSPSWLKESFGEGRFVDE 323 (359)
Q Consensus 250 ~~~prI~fSgl~~-e-~kk~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AI--a-wIVsp~WL~eS~k~g~flDE 323 (359)
.+.+.+++|||.. + ...+...-.||+++-.| +..||||||. ..-|.||=.-. . -||+-+||.+|++.++.||-
T Consensus 318 L~GVV~VlSGfqNP~Rs~LRskAl~LGAkY~pDW~~gsThLICA-F~NTPKy~QV~g~Gg~IV~keWI~~Cy~~kk~lp~ 396 (508)
T KOG3226|consen 318 LEGVVFVLSGFQNPERSTLRSKALTLGAKYQPDWNAGSTHLICA-FPNTPKYRQVEGNGGTIVSKEWITECYAQKKLLPI 396 (508)
T ss_pred hhceEEEEecccCchHHHHHHHHHhhcccccCCcCCCceeEEEe-cCCCcchhhcccCCceEeeHHHHHHHHHHHhhccH
Confidence 4567889999954 3 33456667899999999 8899999997 55666665444 4 99999999999999999999
Q ss_pred CcceecCcc
Q 048173 324 SFYMLNDDG 332 (359)
Q Consensus 324 e~Y~L~D~e 332 (359)
.-|++...+
T Consensus 397 rrYlm~~~~ 405 (508)
T KOG3226|consen 397 RRYLMHAGK 405 (508)
T ss_pred HHHHhcCCC
Confidence 999987553
No 70
>COG2388 Predicted acetyltransferase [General function prediction only]
Probab=97.49 E-value=0.00019 Score=60.32 Aligned_cols=56 Identities=16% Similarity=0.227 Sum_probs=50.3
Q ss_pred CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEE
Q 048173 60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTI 117 (359)
Q Consensus 60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I 117 (359)
.++|+.+|-+.+...+++. --|.|..|++++||||||+.|++++.+.+++.|.+-|
T Consensus 21 ~~~G~~~~e~~y~~~~~~~--i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~g~kii 76 (99)
T COG2388 21 TDEGEVIGEATYYDRGENL--IIIDHTYVPDELRGQGIAQKLVEKALEEAREAGLKII 76 (99)
T ss_pred ecCCcEEEEEEEecCCCCE--EEEecCcCCHHHcCCcHHHHHHHHHHHHHHHcCCeEc
Confidence 3788899999987777644 7799999999999999999999999999999999766
No 71
>PLN03123 poly [ADP-ribose] polymerase; Provisional
Probab=97.21 E-value=0.00098 Score=74.83 Aligned_cols=83 Identities=11% Similarity=0.107 Sum_probs=64.0
Q ss_pred CCCCceEEEEcccCcc--hHHHHHHHhcCcEEecC-CCCeeEEEeCCC--CCcHHHHhhc--c-cccCHHHHHHHHhCCC
Q 048173 248 PNGKCFRITLMNIADD--SKKVHLTKNLRGAVTSD-GITSTHVVAGKV--RKTLNFFTAL--S-WIVSPSWLKESFGEGR 319 (359)
Q Consensus 248 ~~~~~prI~fSgl~~e--~kk~klik~LGG~V~~d-~~~~THLVa~~~--~RT~KfL~AI--a-wIVsp~WL~eS~k~g~ 319 (359)
.+-++.+|.++|-.+. ...++.|+.+||++... ...|||||+..- ++..|+-.|- . .||+.+||.+|.+.+.
T Consensus 392 ~~l~~~~i~i~G~~~~~~~~~k~~Ie~~GG~~s~~v~~~~t~l~tt~e~~k~~~kv~qAk~~~ipIVsedwL~ds~~~~~ 471 (981)
T PLN03123 392 EFLGDLKVSIVGASKEKVTEWKAKIEEAGGVFHATVKKDTNCLVVCGELDDEDAEMRKARRMKIPIVREDYLVDCFKKKK 471 (981)
T ss_pred CCcCCeEEEEecCCCCcHHHHHHHHHhcCCEEeeeccCCceEEEccHHhhhcchHHHHHHhcCCCcccHHHHHHHHhccc
Confidence 4456789999887554 33357799999999988 668999999862 3444544443 3 9999999999999999
Q ss_pred CCCCCcceecC
Q 048173 320 FVDESFYMLND 330 (359)
Q Consensus 320 flDEe~Y~L~D 330 (359)
.+++..|.+..
T Consensus 472 ~~p~~~y~~~~ 482 (981)
T PLN03123 472 KLPFDKYKLEA 482 (981)
T ss_pred cCcchhhhhcc
Confidence 99999997754
No 72
>KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only]
Probab=97.18 E-value=0.0019 Score=58.86 Aligned_cols=98 Identities=14% Similarity=0.141 Sum_probs=73.8
Q ss_pred CCCCcEEEEEEeeecCCCCce-eeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccC
Q 048173 60 LNLGKVVAAVIYQIVPADTQY-AEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQD 135 (359)
Q Consensus 60 ~~~g~IVgvi~l~i~~~d~~~-a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~G 135 (359)
..+|+|-|-|.+-..+.++.. +-|--++|.|+||+.|+|+.++..+++.....+.--|-+.++. .|..||+|+ |
T Consensus 48 ~p~~~imgyimgk~Eg~~~~wh~HvTAltVap~~Rrl~la~~lm~~led~~d~~~a~fvDLfVr~sN~iAI~mYkkL--G 125 (173)
T KOG3234|consen 48 APTGEIMGYIMGKVEGKDTEWHGHVTALTVAPDYRRLGLAAKLMDTLEDVSDVDNAYFVDLFVRVSNQIAIDMYKKL--G 125 (173)
T ss_pred CCCCceEEEEeeeccccCcceeeEEEEEEechhHHHHHHHHHHHHHHHHHHHhhhhheeeeeeeccchhHHHHHHhc--C
Confidence 567899999998776665532 4477889999999999999999999999999877777555544 599999999 9
Q ss_pred cEEEEeecc---cCcccCcchhhhhhhcCC
Q 048173 136 FASVAEVDT---EGRAGRLPLRQKFRKSTE 162 (359)
Q Consensus 136 F~~~~e~~~---~g~~~~~~~~~~m~K~l~ 162 (359)
|++...+-. .|+=.+ -=+|||+|.
T Consensus 126 Y~~YR~Vi~YY~~g~ded---a~dMRKalS 152 (173)
T KOG3234|consen 126 YSVYRTVIEYYSVGPDED---AYDMRKALS 152 (173)
T ss_pred ceEEEeeeeeeccCCCcc---hHhhhhhhc
Confidence 998665433 121111 125899888
No 73
>PLN03122 Poly [ADP-ribose] polymerase; Provisional
Probab=97.17 E-value=0.001 Score=73.46 Aligned_cols=81 Identities=15% Similarity=0.073 Sum_probs=64.9
Q ss_pred CCCceEEEEcccCcc--hHHHHHHHhcCcEEecCCCCeeEEEeCCCC---C-cHHHHhhcc---cccCHHHHHHHHhCCC
Q 048173 249 NGKCFRITLMNIADD--SKKVHLTKNLRGAVTSDGITSTHVVAGKVR---K-TLNFFTALS---WIVSPSWLKESFGEGR 319 (359)
Q Consensus 249 ~~~~prI~fSgl~~e--~kk~klik~LGG~V~~d~~~~THLVa~~~~---R-T~KfL~AIa---wIVsp~WL~eS~k~g~ 319 (359)
+-...+|+|||--.. +..+++|+.+||.|+++.+.+||+|+.... . +-|+-.|-. .||+.+||.+|++.++
T Consensus 189 pL~G~~fviTGtl~~sr~elK~~Ie~~GGkvsssVs~~T~lIvt~~ev~k~gsSKlkkAk~lgIpIVsEd~L~d~i~~~k 268 (815)
T PLN03122 189 PFSGMMISLSGRLSRTHQYWKKDIEKHGGKVANSVEGVTCLVVSPAERERGGSSKIAEAMERGIPVVREAWLIDSIEKQE 268 (815)
T ss_pred CcCCcEEEEeCCCCCCHHHHHHHHHHcCCEEccccccceEEEEcCccccccCccHHHHHHHcCCcCccHHHHHHHHhcCC
Confidence 456789999997543 334578999999999999999999987633 2 245555544 9999999999999999
Q ss_pred CCCCCcceec
Q 048173 320 FVDESFYMLN 329 (359)
Q Consensus 320 flDEe~Y~L~ 329 (359)
.+++.+|.+.
T Consensus 269 ~~~~~~y~l~ 278 (815)
T PLN03122 269 AQPLEAYDVV 278 (815)
T ss_pred cccchhhhhc
Confidence 9999999984
No 74
>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length. It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.
Probab=97.05 E-value=0.0017 Score=57.06 Aligned_cols=72 Identities=22% Similarity=0.272 Sum_probs=51.6
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc-------cHHHHhhcc
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE-------SSFFFLKQV 133 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~-------A~~Fw~K~~ 133 (359)
=|++++|++.+.+.. +.+.|.+|+|++.=||+|||..|++++...+ -+|+...+..... -..|-+.+
T Consensus 45 FNdRlLgAv~v~~~~---~~~~L~~l~VRevTRrRGVG~yLlee~~rq~--p~i~~w~l~~~~~~~~~~~~~~~Fm~a~- 118 (128)
T PF12568_consen 45 FNDRLLGAVKVTISG---QQAELSDLCVREVTRRRGVGLYLLEEVLRQL--PDIKHWWLADEGVEPQDRAVMAAFMQAC- 118 (128)
T ss_dssp ETTEEEEEEEEEEET---TEEEEEEEEE-TT-SSSSHHHHHHHHHHHHS---S--EEEE--TT-S--THHHHHHHHHHH-
T ss_pred echheeeeEEEEEcC---cceEEeeEEEeeccccccHHHHHHHHHHHHC--CCCcEEEEecCCCcccchHHHHHHHHHc-
Confidence 588999999977643 4688999999999999999999999999988 4566665555532 24899999
Q ss_pred cCcEEE
Q 048173 134 QDFASV 139 (359)
Q Consensus 134 ~GF~~~ 139 (359)
||...
T Consensus 119 -GF~~~ 123 (128)
T PF12568_consen 119 -GFSAQ 123 (128)
T ss_dssp -T-EE-
T ss_pred -Ccccc
Confidence 99643
No 75
>KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only]
Probab=97.05 E-value=0.0026 Score=58.31 Aligned_cols=93 Identities=17% Similarity=0.232 Sum_probs=69.9
Q ss_pred hhccCccccccccccceeeccC-CCCcEEEEEEeeecC--CCC-ceeeeeEEEeccCccccChHHHHHHHHHHH-HHHcC
Q 048173 39 LYMGSIHPLINLCSMYKVVSFL-NLGKVVAAVIYQIVP--ADT-QYAEVPLAAVSSIYQHKGVGRLLYLKLRKR-LQSVG 113 (359)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~-~~g~IVgvi~l~i~~--~d~-~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~-lk~~G 113 (359)
||-++--|-+ |-.+. ++|+|||-++--+.. .|+ ..+.|..+||...||+.|||+.|+...... ...-+
T Consensus 33 lyh~lswp~l-------SyVA~D~~gkiVGYvlAkmee~p~~~~~hGhItSlaV~rs~RrlGla~kLm~qa~rAm~E~~~ 105 (193)
T KOG3235|consen 33 LYHGLSWPQL-------SYVAEDENGKIVGYVLAKMEEDPDDEPPHGHITSLAVKRSYRRLGLAQKLMNQASRAMVEVYE 105 (193)
T ss_pred HHhhcccccc-------eEEEEcCCCcEEEEeeeehhhcccCCCCCCeeEEeeehhhHHHhhHHHHHHHHHHHHHHHhhc
Confidence 5666666654 33333 788999977755444 233 378999999999999999999998765443 34556
Q ss_pred CcEEEEEeccc---cHHHHh-hcccCcEEEE
Q 048173 114 IRTIFCWDDKE---SSFFFL-KQVQDFASVA 140 (359)
Q Consensus 114 I~~I~l~a~~~---A~~Fw~-K~~~GF~~~~ 140 (359)
...|.+.+++. |.+.|. .+ ||++.+
T Consensus 106 A~yvsLHVR~SNraAl~LY~~tl--~F~v~e 134 (193)
T KOG3235|consen 106 AKYVSLHVRKSNRAALHLYKNTL--GFVVCE 134 (193)
T ss_pred ceEEEEeeecccHHHHHhhhhcc--ceEEee
Confidence 88899988884 888998 88 999877
No 76
>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=96.98 E-value=0.00068 Score=74.07 Aligned_cols=56 Identities=23% Similarity=0.331 Sum_probs=44.6
Q ss_pred eeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEE-EEEec-cccHHHHhhcccCcEEEE
Q 048173 82 EVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTI-FCWDD-KESSFFFLKQVQDFASVA 140 (359)
Q Consensus 82 ~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I-~l~a~-~~A~~Fw~K~~~GF~~~~ 140 (359)
-|-.+||||++|++|||+++++.+.++++ .|..-+ .-.+. .+=-.||.|| ||..+.
T Consensus 533 RIvRIAvhPe~q~~GiGsrlL~~l~~~a~-~~~DwlgvsFG~t~~L~rFW~rn--GF~pVh 590 (758)
T COG1444 533 RIVRIAVHPELQRMGIGSRLLALLIEEAR-KGLDWLGVSFGYTEELLRFWLRN--GFVPVH 590 (758)
T ss_pred eEEEEEeCHHHHhcCHHHHHHHHHHHHHh-cCCCEEeeccCCCHHHHHHHHHc--CeEEEE
Confidence 47789999999999999999999999998 455555 12222 2357899999 999765
No 77
>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]
Probab=96.69 E-value=0.0046 Score=55.18 Aligned_cols=65 Identities=23% Similarity=0.286 Sum_probs=59.5
Q ss_pred CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc-----cHHHHhhcccCcEEEEeecc
Q 048173 78 TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE-----SSFFFLKQVQDFASVAEVDT 144 (359)
Q Consensus 78 ~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~-----A~~Fw~K~~~GF~~~~e~~~ 144 (359)
+.+-+|....|....||+|+||+|+..+...++..|...+.|.++-. |-.|--.. ||..+++...
T Consensus 82 e~F~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~agy~~~tCEVn~DppnpasdaFHaal--GF~eVG~a~i 151 (167)
T COG3818 82 ENFFYVDRVVVASRARGRGVARALYADLFSYAELAGYPYLTCEVNLDPPNPASDAFHAAL--GFHEVGQATI 151 (167)
T ss_pred CceEEEEEEEEEecccccchHHHHHHHHHHHHHhcCCceEEEEecCCCCChHHHHHhhhc--CceEccceEE
Confidence 47789999999999999999999999999999999999999998873 88899999 9999997655
No 78
>KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only]
Probab=96.33 E-value=0.0039 Score=56.94 Aligned_cols=59 Identities=15% Similarity=0.222 Sum_probs=50.5
Q ss_pred eeeeEEEeccCccccChHHHHHHHHHHHHHHcC-CcEEEEEeccccHHHHhhcccCcEEEEe
Q 048173 81 AEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVG-IRTIFCWDDKESSFFFLKQVQDFASVAE 141 (359)
Q Consensus 81 a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~G-I~~I~l~a~~~A~~Fw~K~~~GF~~~~e 141 (359)
+-|..++|+|+||.+|.|..|+..-.+.+-+.- .+++++.+-+-=.+||++. ||..+++
T Consensus 102 i~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~Li~h~pLvPFYEr~--gFk~vgp 161 (190)
T KOG4144|consen 102 IHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAALICHDPLVPFYERF--GFKAVGP 161 (190)
T ss_pred eeEEEEEecHHHHhcCcchhHHHHHHHHhhcCccccceeeeecCCccchhHhc--Cceeecc
Confidence 559999999999999999999988666555544 5678888888889999999 9999996
No 79
>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans. Note that some proteins in the entry contain more than one copy of this region.
Probab=96.08 E-value=0.024 Score=52.47 Aligned_cols=78 Identities=19% Similarity=0.173 Sum_probs=59.7
Q ss_pred CCCcEEEEEEeeecCC-----CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccC
Q 048173 61 NLGKVVAAVIYQIVPA-----DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQD 135 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~-----d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~G 135 (359)
+..+|||..-+....+ |+.+.+|+++-++|+|||+|+++.+-+-+.++++..+-+.+.+ +...+..||.|. -|
T Consensus 54 gT~~via~~~~~~~~~l~~~~d~pl~~~G~~w~~p~yRg~~~~kl~~~~~~~~~~~~~~N~~~~-~~~~~~~~w~k~-~G 131 (181)
T PF06852_consen 54 GTDRVIATVHLIRFDPLNPSPDKPLQFIGFFWIDPEYRGKGIMKLQDDICMDELDSVDDNSVAQ-GNVKMSNFWHKM-FG 131 (181)
T ss_pred CCCcEEEEEEEEEeccCCCCCCCCeEEEeeeeeCCcccCcchHHHHHHHHHHHhccCCCceeee-cCHHHHHHHHHH-hC
Confidence 4568998877644332 5679999999999999999999877777778888887776664 555678899987 46
Q ss_pred cEEEE
Q 048173 136 FASVA 140 (359)
Q Consensus 136 F~~~~ 140 (359)
|...+
T Consensus 132 ~~~~~ 136 (181)
T PF06852_consen 132 FDDYG 136 (181)
T ss_pred CCCCc
Confidence 55444
No 80
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=96.07 E-value=0.03 Score=51.64 Aligned_cols=89 Identities=16% Similarity=0.105 Sum_probs=63.1
Q ss_pred CCCcEEEEEEeeecCCCCce---eeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc---cHHHHhhccc
Q 048173 61 NLGKVVAAVIYQIVPADTQY---AEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE---SSFFFLKQVQ 134 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~---a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~---A~~Fw~K~~~ 134 (359)
+||++||.+.+--.=.+.-+ +-|+ ..|.|+.||||.|+.+++-..+.|+.+||++|.+-++.+ |..==++|
T Consensus 76 ~d~~ivG~i~lRh~Ln~~ll~~gGHIG-Y~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN~ASrkvI~~N-- 152 (174)
T COG3981 76 EDGQIVGFINLRHQLNDFLLEEGGHIG-YSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDNIASRKVIEAN-- 152 (174)
T ss_pred cCCcEEEEEEeeeecchHHHhcCCccc-ceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCCchhhHHHHhc--
Confidence 58999999875322221100 1122 379999999999999999999999999999998887774 78888888
Q ss_pred CcEEEEeeccc-CcccCcc
Q 048173 135 DFASVAEVDTE-GRAGRLP 152 (359)
Q Consensus 135 GF~~~~e~~~~-g~~~~~~ 152 (359)
|=.-..++... -.++|+.
T Consensus 153 GGile~~~~~~g~~~~RYW 171 (174)
T COG3981 153 GGILENEFFGEGKEIRRYW 171 (174)
T ss_pred CCEEeEEEccCCceeeeee
Confidence 75555544442 2345544
No 81
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B.
Probab=95.66 E-value=0.053 Score=52.89 Aligned_cols=80 Identities=16% Similarity=0.124 Sum_probs=61.4
Q ss_pred CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEE
Q 048173 60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASV 139 (359)
Q Consensus 60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~ 139 (359)
..+|+||+.+.-...+.+. ++|. ++.+|+|||||+++.+..++.....+.|+.-.+.-.+..|..-=+|+ ||+-.
T Consensus 171 ~~~~~iVs~~~s~~~~~~~--~EI~-I~T~~~yR~kGLA~~~aa~~I~~Cl~~~l~P~WDc~N~~S~~lA~kL--Gf~~~ 245 (265)
T PF12746_consen 171 LHDGEIVSGCSSYFVYENG--IEID-IETHPEYRGKGLATAVAAAFILECLENGLYPSWDCHNLASIALAEKL--GFHFD 245 (265)
T ss_dssp EETTEEEEEEEEEEEETTE--EEEE-EEE-CCCTTSSHHHHHHHHHHHHHHHTT-EEE-EESSHHHHHHHHHC--T--EE
T ss_pred EECCEEEEEEEEEEEECCE--EEEE-EEECHHhhcCCHHHHHHHHHHHHHHHCCCCcCeeCCCHHHHHHHHHc--CCccc
Confidence 3778998877666666644 7765 56699999999999999999999999999888766677799999999 99987
Q ss_pred Eeecc
Q 048173 140 AEVDT 144 (359)
Q Consensus 140 ~e~~~ 144 (359)
.+...
T Consensus 246 ~~Y~~ 250 (265)
T PF12746_consen 246 FEYTA 250 (265)
T ss_dssp EEEEE
T ss_pred ceeee
Confidence 76444
No 82
>KOG3548 consensus DNA damage checkpoint protein RHP9/CRB2/53BP1 [Replication, recombination and repair]
Probab=95.47 E-value=0.0079 Score=66.83 Aligned_cols=44 Identities=20% Similarity=0.311 Sum_probs=40.4
Q ss_pred EEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhCCCCCCCCcceec
Q 048173 286 HVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFVDESFYMLN 329 (359)
Q Consensus 286 HLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~g~flDEe~Y~L~ 329 (359)
-||+....||.|+|.||| +.|++.||.+|.++++.||=.+|+|-
T Consensus 990 lLIsdth~Rt~KYLeaLA~giPcVh~~fI~aC~e~nr~Vdy~~YLLp 1036 (1176)
T KOG3548|consen 990 LLISDTHYRTHKYLEALARGIPCVHNTFIQACGEQNRCVDYTDYLLP 1036 (1176)
T ss_pred eEeehhhhHHHHHHHHHHcCCCcccHHHHHHHHhccccccchhhccc
Confidence 467777889999999999 89999999999999999999999875
No 83
>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
Probab=95.41 E-value=0.017 Score=60.25 Aligned_cols=80 Identities=15% Similarity=0.158 Sum_probs=62.1
Q ss_pred CCCCcEEEEEEeeecCCCCce-------eeeeEEEe----------ccCccccChHHHHHHHHHHHHHHcCCcEEEEEec
Q 048173 60 LNLGKVVAAVIYQIVPADTQY-------AEVPLAAV----------SSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDD 122 (359)
Q Consensus 60 ~~~g~IVgvi~l~i~~~d~~~-------a~I~~~AV----------~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~ 122 (359)
.+++-+||..++-+...+.-+ |-|+.+-| ...||++|.|+.|++++|..|++.|..+|...+-
T Consensus 413 ~~~d~lig~lrlR~p~e~~~r~e~~~~~aivrelhvyg~~vpig~~~~~~QH~G~G~~L~~~AE~ia~ee~~~ki~viSg 492 (515)
T COG1243 413 PKNDILIGFLRLREPSEGAHREEIDDKTAIVRELHVYGSEVPIGKREDEWQHRGYGRELLEEAERIAREEGAKKILVISG 492 (515)
T ss_pred chhhhhhheeeecccccchhhhhcccchhhhhhhhccccccccccCcchhhcccHHHHHHHHHHHHHHhhccccEEEEec
Confidence 345668888887665543322 22222222 4789999999999999999999999999999999
Q ss_pred cccHHHHhhcccCcEEEEe
Q 048173 123 KESSFFFLKQVQDFASVAE 141 (359)
Q Consensus 123 ~~A~~Fw~K~~~GF~~~~e 141 (359)
..+..||.|. ||+..+.
T Consensus 493 iG~ReYy~k~--GY~~~gp 509 (515)
T COG1243 493 IGVREYYRKL--GYELDGP 509 (515)
T ss_pred ccHHHHHHHh--CccccCC
Confidence 9999999999 9997664
No 84
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=95.33 E-value=0.016 Score=48.00 Aligned_cols=71 Identities=17% Similarity=0.190 Sum_probs=56.5
Q ss_pred CCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCc
Q 048173 60 LNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDF 136 (359)
Q Consensus 60 ~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF 136 (359)
+.+|++|-=++. ++++++++..--|+|||||+.+.++..+.+.|+++|+. +++.+.+ .+.....+. ||
T Consensus 5 gpeG~PVSW~lm------dqtge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~~g~P-~Y~hv~~~N~~~~r~~~~l--g~ 75 (89)
T PF08444_consen 5 GPEGNPVSWSLM------DQTGEMRMGYTLPEYRGQGLMSQVMYHLAQYLHKLGFP-FYGHVDEDNEASQRLSKSL--GF 75 (89)
T ss_pred CCCCCEeEEEEe------cccccccccccCHhHhcCCHHHHHHHHHHHHHHHCCCC-eEeehHhccHHHHHHHHHC--CC
Confidence 467777764441 26788999999999999999999999999999999996 4444443 478888888 88
Q ss_pred EEE
Q 048173 137 ASV 139 (359)
Q Consensus 137 ~~~ 139 (359)
...
T Consensus 76 ~~~ 78 (89)
T PF08444_consen 76 IFM 78 (89)
T ss_pred eec
Confidence 753
No 85
>COG5628 Predicted acetyltransferase [General function prediction only]
Probab=95.21 E-value=0.041 Score=48.49 Aligned_cols=69 Identities=13% Similarity=0.081 Sum_probs=53.2
Q ss_pred CCCcEEEEEEeeecCC---CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEE-EEEeccccHHHHhhc
Q 048173 61 NLGKVVAAVIYQIVPA---DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTI-FCWDDKESSFFFLKQ 132 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~---d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I-~l~a~~~A~~Fw~K~ 132 (359)
-+|.+||-+++--.+. ..+++ |..|++-..|||+|+||+.++++-...+. .-.| .+--++-|..||.+-
T Consensus 44 ~~~~~igf~l~L~~~~~~~~iD~~-~~efFIi~k~~~~GvGR~aaK~If~~~~g--~w~Va~i~EN~PA~~fwK~~ 116 (143)
T COG5628 44 IGGLPVGFALVLDLAHSPTPIDRA-VAEFFIVRKHRRRGVGRAAAKAIFGSAWG--VWQVATVRENTPARAFWKRV 116 (143)
T ss_pred ECCceeeeeeeecccCCCCccccc-chheEeeehhhccchhHHHHHHHHHHhhc--eEEEEEeccCChhHHHHHhh
Confidence 5788999877644443 33778 99999999999999999999999988764 3334 333344599999998
No 86
>KOG1929 consensus Nucleotide excision repair factor NEF2, RAD4/CUT5 component [Replication, recombination and repair]
Probab=95.18 E-value=0.034 Score=61.62 Aligned_cols=84 Identities=19% Similarity=0.193 Sum_probs=71.5
Q ss_pred CCCCceEEEEcccCcchHH--HHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhCCCCC
Q 048173 248 PNGKCFRITLMNIADDSKK--VHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFV 321 (359)
Q Consensus 248 ~~~~~prI~fSgl~~e~kk--~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~g~fl 321 (359)
+.-...+|+.||+...++. ..++.+.||+.... ....+|++.....-|.|+-+|+- .||+++|+.+|...+..+
T Consensus 102 p~~~~~~Vc~tgl~~~eK~ei~~~v~k~gg~~~~~L~s~v~~~~~~~~~~~~kYe~al~wn~~v~~~~w~~~s~~~~~~~ 181 (811)
T KOG1929|consen 102 PGFFGLKVCLTGLSGDEKSEIKILVPKHGGTLHRSLSSDVNSLKILPEVKTEKYEQALKWNIPVVSDDWLFDSIEKTAVL 181 (811)
T ss_pred CcccceEEEecccchHHHHHHHHHhhhcccEEehhhhhhhheeeeccccchHHHHHHHhhCCccccHHHHhhhhcccccc
Confidence 4445678999999875443 47788999998887 67788888888888899999998 699999999999999999
Q ss_pred CCCcceecCc
Q 048173 322 DESFYMLNDD 331 (359)
Q Consensus 322 DEe~Y~L~D~ 331 (359)
++++|++.-.
T Consensus 182 ~~~~~e~~~~ 191 (811)
T KOG1929|consen 182 ETKPYEGAPV 191 (811)
T ss_pred cccccccccc
Confidence 9999998874
No 87
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=95.14 E-value=0.033 Score=56.50 Aligned_cols=56 Identities=14% Similarity=0.113 Sum_probs=52.2
Q ss_pred ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEE
Q 048173 79 QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFAS 138 (359)
Q Consensus 79 ~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~ 138 (359)
..+.|-..|+.|+|||+|.-++|+.+.++..++.|+.-.+|.... .+||.|- ||+-
T Consensus 69 ~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~~kG~p~s~L~P~s--~~iYrKf--Gye~ 124 (389)
T COG4552 69 PTAGIAGVASAPTYRRRGALRALLAHSLREIARKGYPVSALHPFS--GGIYRKF--GYEY 124 (389)
T ss_pred eccceEEEEechhhccCcHHHHHHHHHHHHHHHcCCeeEEeccCc--hhhHhhc--cccc
Confidence 567899999999999999999999999999999999999998876 8999999 9985
No 88
>TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase. Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production.
Probab=94.81 E-value=0.12 Score=49.38 Aligned_cols=77 Identities=22% Similarity=0.257 Sum_probs=62.3
Q ss_pred CCCcEEEEEEeeec----C------------------------CCCceeeeeEEEeccCcccc--------C--------
Q 048173 61 NLGKVVAAVIYQIV----P------------------------ADTQYAEVPLAAVSSIYQHK--------G-------- 96 (359)
Q Consensus 61 ~~g~IVgvi~l~i~----~------------------------~d~~~a~I~~~AV~~~~Qgk--------G-------- 96 (359)
++|++||++++... | ...+..||-.|||+++||++ |
T Consensus 64 ~~g~vvG~~RLl~t~~~~p~~~~p~e~~~~~~~~~~~~~~~~~~~~~i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~ 143 (241)
T TIGR03694 64 RTGTFVGCVRLVLPNSSDPDQPFPFEKHCSHSLDGLFLDPRRLPRSRIAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEA 143 (241)
T ss_pred CCCCEEEEEEEeccccccccccccHHHHhccccchhhcCccccCCCceEEeehheECHhHhCCccccccccccccccccc
Confidence 46899999998752 0 01368899999999999974 2
Q ss_pred ------------hHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEE
Q 048173 97 ------------VGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASV 139 (359)
Q Consensus 97 ------------IG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~ 139 (359)
+...|+.++.+.+...||++++.++...-...+.+. |+...
T Consensus 144 ~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~v~~~~l~r~l~r~--G~~~~ 196 (241)
T TIGR03694 144 PFSESERRRFPHIPLGLYLGLIALSSANGITHWYAIMEPRLARLLSRF--GIQFR 196 (241)
T ss_pred ccchhhcccCchHHHHHHHHHHHHHHHCCCcEEEEEeCHHHHHHHHHh--CCceE
Confidence 456799999999999999999999998767778889 98753
No 89
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain
Probab=94.55 E-value=0.11 Score=42.69 Aligned_cols=63 Identities=16% Similarity=0.072 Sum_probs=50.7
Q ss_pred eeeccCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEE
Q 048173 55 KVVSFLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCW 120 (359)
Q Consensus 55 ~~~~~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~ 120 (359)
.......+|++||+...... . +..+.....++++|++.++|..|+.++.+.+.+.|++.+-+-
T Consensus 72 ~l~~~~~~g~~va~~~~~~~-~--~~~~~~~~g~~~~~~~~~~~~~l~~~~i~~a~~~g~~~~d~g 134 (142)
T PF13480_consen 72 RLFVLYDGGEPVAFALGFRH-G--GTLYYWYGGYDPEYRKYSPGRLLLWEAIRWAIERGLRYFDFG 134 (142)
T ss_pred EEEEEEECCEEEEEEEEEEE-C--CEEEEEEEEECHhhHhCCHHHHHHHHHHHHHHHCCCCEEEEC
Confidence 33444468999999875443 2 357789999999999999999999999999999999877543
No 90
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=94.33 E-value=0.02 Score=61.84 Aligned_cols=81 Identities=21% Similarity=0.307 Sum_probs=62.3
Q ss_pred ceEEEEcccCcchH------HHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc----cccCHHHHHHHHhCCCC
Q 048173 252 CFRITLMNIADDSK------KVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS----WIVSPSWLKESFGEGRF 320 (359)
Q Consensus 252 ~prI~fSgl~~e~k------k~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa----wIVsp~WL~eS~k~g~f 320 (359)
.-.++|||+.|..- .-.....+|..++.+ ..++||+|+-+ .+|.|...|.- |||.+.||..|...+..
T Consensus 444 ~~~~vfSg~~P~~~~~~~s~~~~~~~~~g~vs~~~~~~~~th~i~~~-~gt~k~~~a~~~~~~~Vv~~~wl~~~~e~w~~ 522 (635)
T KOG0323|consen 444 GSQIVFSGLHPTGSTDESADILGVAQQLGAVSAPDVSDKTTHLIAAN-AGTKKVYKAVVSGSAKVVNAAWLWRSLEKWGK 522 (635)
T ss_pred ccceeecccccCcCCcchhhhhhhhhcccceecccccchhhhHHhhc-cCcceeeccccccceeEechhHHHHHHHHhcc
Confidence 34688999888531 113346889887766 78899999764 35666666543 99999999999999999
Q ss_pred CCCCcceecCccc
Q 048173 321 VDESFYMLNDDGY 333 (359)
Q Consensus 321 lDEe~Y~L~D~e~ 333 (359)
++|..|-+.|...
T Consensus 523 v~ek~~~l~~~~~ 535 (635)
T KOG0323|consen 523 VEEKLEPLDDDQR 535 (635)
T ss_pred hhccccccccccc
Confidence 9999999887654
No 91
>KOG4135 consensus Predicted phosphoglucosamine acetyltransferase [Carbohydrate transport and metabolism]
Probab=93.90 E-value=0.16 Score=46.42 Aligned_cols=62 Identities=21% Similarity=0.053 Sum_probs=52.1
Q ss_pred ceeeeeEEEeccCccccChHHHHHHHHHHHHHHc-CCcEEEEEe---ccccHHHHhhcccCcEEEEee
Q 048173 79 QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV-GIRTIFCWD---DKESSFFFLKQVQDFASVAEV 142 (359)
Q Consensus 79 ~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~-GI~~I~l~a---~~~A~~Fw~K~~~GF~~~~e~ 142 (359)
-.+++--|--.|..||||+|+..+.++..++.+. ++.+-.... ++-+..||.|. +|+.+.-.
T Consensus 106 ~~gE~EvMIAEP~~RgKG~G~eav~~ml~y~~s~l~l~Ky~vkig~~nk~sl~lFkk~--~f~q~~~n 171 (185)
T KOG4135|consen 106 ITGEVEVMIAEPRGRGKGIGTEAVRAMLAYAYSVLKLDKYEVKIGMDNKPSLRLFKKF--LFTQVFYN 171 (185)
T ss_pred eeeeEEEEEecccccCCCccHHHHHHHHHHHHHHhhhheEEEEecCCCchHHHHHHHh--hheeeeee
Confidence 4578888888999999999999999999999864 777777666 44599999999 99977653
No 92
>cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish. DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=93.48 E-value=0.12 Score=43.37 Aligned_cols=47 Identities=26% Similarity=0.181 Sum_probs=35.9
Q ss_pred CCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHH
Q 048173 62 LGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKR 108 (359)
Q Consensus 62 ~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~ 108 (359)
++...||+.+-..+++...+++.-|||.++.||.|+|+.|++++.+.
T Consensus 16 ~e~y~~~aIvt~~~~~~~~~yLdKfaV~~~~~g~gvad~vf~~i~~d 62 (99)
T cd04264 16 SEGYNAAAIVTYEGVNNGVPYLDKFAVSSSAQGEGTSDALWRRLRRD 62 (99)
T ss_pred eCCceEEEEEeccCCCCCceEEEEEEEchhhhhcChHHHHHHHHHhh
Confidence 44455555543333345779999999999999999999999988876
No 93
>PRK13834 putative autoinducer synthesis protein; Provisional
Probab=93.25 E-value=0.54 Score=43.98 Aligned_cols=77 Identities=12% Similarity=0.117 Sum_probs=59.9
Q ss_pred CCCcEEEEEEeeec-------------------CCCCceeeeeEEEeccCccc-c--C----hHHHHHHHHHHHHHHcCC
Q 048173 61 NLGKVVAAVIYQIV-------------------PADTQYAEVPLAAVSSIYQH-K--G----VGRLLYLKLRKRLQSVGI 114 (359)
Q Consensus 61 ~~g~IVgvi~l~i~-------------------~~d~~~a~I~~~AV~~~~Qg-k--G----IG~~Lv~~l~~~lk~~GI 114 (359)
++|+|||+.+|.-. +...+..||-.|||++++++ + + +...|+..+.+.+...||
T Consensus 61 ~~g~vvG~~RLlptt~p~ml~~~fp~l~~~~~~~~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi 140 (207)
T PRK13834 61 DSGRVAGCARLLPAIGPTMLAQVFPQLLPAGRLNAHPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSMANGY 140 (207)
T ss_pred CCCeEEEEEecccCCCcchhhhhcHHhcCCCCCCCCCCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHHHCCC
Confidence 67899999987322 11347899999999998632 2 2 667899999999999999
Q ss_pred cEEEEEeccccHHHHhhcccCcEEE
Q 048173 115 RTIFCWDDKESSFFFLKQVQDFASV 139 (359)
Q Consensus 115 ~~I~l~a~~~A~~Fw~K~~~GF~~~ 139 (359)
+.++.++...=+.-+.+. ||...
T Consensus 141 ~~~~~v~~~~~~r~l~r~--G~~~~ 163 (207)
T PRK13834 141 TEIVTATDLRFERILARA--GWPMQ 163 (207)
T ss_pred CEEEEEECHHHHHHHHHc--CCCeE
Confidence 999999887555667888 98753
No 94
>PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth. Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A.
Probab=92.94 E-value=0.61 Score=42.87 Aligned_cols=78 Identities=18% Similarity=0.096 Sum_probs=61.2
Q ss_pred CCCcEEEEEEeeecC-------------------CCCceeeeeEEEeccCccc------cChHHHHHHHHHHHHHHcCCc
Q 048173 61 NLGKVVAAVIYQIVP-------------------ADTQYAEVPLAAVSSIYQH------KGVGRLLYLKLRKRLQSVGIR 115 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~-------------------~d~~~a~I~~~AV~~~~Qg------kGIG~~Lv~~l~~~lk~~GI~ 115 (359)
++|+|+|+++|.-.. .+.+.-|+-.|||+++..+ .-+...|+.++.+.+.+.||+
T Consensus 52 ~~g~v~g~~RLlptt~p~ML~~~F~~ll~~~~~p~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~e~a~~~gi~ 131 (182)
T PF00765_consen 52 DDGRVVGCARLLPTTGPYMLSDVFPHLLPDGPAPRSPDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMVEFALSNGIR 131 (182)
T ss_dssp ETTEEEEEEEEEETTS--HHHHCTGGGHTTS---SSTTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHHHHHHCTT-S
T ss_pred ECCEEEEEeeeccCCCcchhhhHHHHHhCCCCCCCCCcceeeeEEEEcccccccccccccHHHHHHHHHHHHHHHHCCCC
Confidence 459999999987321 1357889999999998543 246789999999999999999
Q ss_pred EEEEEeccccHHHHhhcccCcEEEE
Q 048173 116 TIFCWDDKESSFFFLKQVQDFASVA 140 (359)
Q Consensus 116 ~I~l~a~~~A~~Fw~K~~~GF~~~~ 140 (359)
.++.++...-+..+.+. ||...-
T Consensus 132 ~~v~V~~~~~~r~l~r~--G~~~~~ 154 (182)
T PF00765_consen 132 HIVGVVDPAMERILRRA--GWPVRR 154 (182)
T ss_dssp EEEEEEEHHHHHHHHHC--T-EEEE
T ss_pred EEEEEEChHHHHHHHHc--CCceEE
Confidence 99999998889999999 999644
No 95
>KOG0966 consensus ATP-dependent DNA ligase IV [Replication, recombination and repair]
Probab=92.85 E-value=0.13 Score=56.71 Aligned_cols=72 Identities=17% Similarity=0.228 Sum_probs=50.1
Q ss_pred EcccCcchH---HHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHH-hhcc---cccCHHHHHHHHhCCCCCCCCccee
Q 048173 257 LMNIADDSK---KVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFF-TALS---WIVSPSWLKESFGEGRFVDESFYML 328 (359)
Q Consensus 257 fSgl~~e~k---k~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL-~AIa---wIVsp~WL~eS~k~g~flDEe~Y~L 328 (359)
++|...+.. ..++|...||.++.+ ....||.|+-...-|-..- .++. -||.|+||.+|.+..++++=.|+.+
T Consensus 642 lsgt~~~~tk~~le~~ivenGG~iv~nv~p~~~~ci~~a~~et~~vk~~~~~~~cdVl~p~Wlldcc~~~~l~p~~P~~~ 721 (881)
T KOG0966|consen 642 LSGTSETHTKAKLEEIIVENGGKIVQNVGPSDTLCIATAGKETTRVKAQAIKRSCDVLKPAWLLDCCKKQRLLPWLPRDL 721 (881)
T ss_pred ecCCcccccHHHHHHHHHHcCCEEEEcCCCCCcceEEeccccchHHHHHHHhccCceeeHHHHHHHHhhhhccccccHHH
Confidence 566655432 347888999999988 5559999864333222222 2223 9999999999999999887777643
No 96
>KOG1929 consensus Nucleotide excision repair factor NEF2, RAD4/CUT5 component [Replication, recombination and repair]
Probab=92.79 E-value=0.15 Score=56.57 Aligned_cols=82 Identities=18% Similarity=0.186 Sum_probs=58.8
Q ss_pred CCceEEEEcccCcc--hHHHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhCCCCCCC
Q 048173 250 GKCFRITLMNIADD--SKKVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGEGRFVDE 323 (359)
Q Consensus 250 ~~~prI~fSgl~~e--~kk~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~g~flDE 323 (359)
-.+..|.++..+.. .+....+..+|+..... ....||||++. .+-.+..++.- .||+|+||.+|.++++.++.
T Consensus 494 ~e~~~~~~s~~~~~~~e~ln~~~~~~gas~~~~f~r~~~~l~~~~-~k~s~~~~~~kw~ip~vT~~wL~e~~rq~~~~~~ 572 (811)
T KOG1929|consen 494 FENLTISNSQSAEAEREKLNNLANDLGASNVKTFTRKSTTLLTTS-AKGSKYEIAGKWSIPIVTPDWLYECVRQNKGERN 572 (811)
T ss_pred ccCceEEeeechHHHHHHHhHhhhhccccccceeeecccEEeccc-cccchhhhccccCCCccChhHHHhhccccCcccc
Confidence 34444544433332 12235677899987776 44449999998 44456666666 89999999999999999999
Q ss_pred CcceecCcc
Q 048173 324 SFYMLNDDG 332 (359)
Q Consensus 324 e~Y~L~D~e 332 (359)
+-|.+....
T Consensus 573 e~~l~~~st 581 (811)
T KOG1929|consen 573 EGFLNGNST 581 (811)
T ss_pred eeecccccc
Confidence 999987655
No 97
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation
Probab=92.60 E-value=0.39 Score=42.10 Aligned_cols=56 Identities=18% Similarity=0.290 Sum_probs=47.2
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEE
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFC 119 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l 119 (359)
.+|++|||+.+-+.+.. ..-|++|. ||++....+|+..+..-.+.+++.|++-+.+
T Consensus 46 ~~~kLiav~v~D~l~~g--lSaVY~fy-DPd~~~~SlG~~~iL~eI~~a~~~~l~y~YL 101 (128)
T PF04377_consen 46 LDGKLIAVAVVDILPDG--LSAVYTFY-DPDYSKRSLGTYSILREIELARELGLPYYYL 101 (128)
T ss_pred eCCeEEEEEEeecccch--hhheeeee-CCCccccCcHHHHHHHHHHHHHHcCCCEEee
Confidence 79999999887666653 24476666 9999999999999999999999999998864
No 98
>KOG2481 consensus Protein required for normal rRNA processing [RNA processing and modification]
Probab=92.01 E-value=0.14 Score=54.17 Aligned_cols=62 Identities=16% Similarity=0.266 Sum_probs=48.4
Q ss_pred HHHHHHhcCcEEecCC-----------CCeeEEEeCCCCCcHHHHhhcccccCHHHHHHHHhCCCCCCCCcceec
Q 048173 266 KVHLTKNLRGAVTSDG-----------ITSTHVVAGKVRKTLNFFTALSWIVSPSWLKESFGEGRFVDESFYMLN 329 (359)
Q Consensus 266 k~klik~LGG~V~~d~-----------~~~THLVa~~~~RT~KfL~AIawIVsp~WL~eS~k~g~flDEe~Y~L~ 329 (359)
..=+|.++||.|.-+. ..+||=|++++.-+.++... --|.|+||.||.-++..++.+.|..+
T Consensus 344 L~fiI~s~GG~V~wd~~~~g~~~~~~d~~ITH~IvDrP~~~~~v~gR--~YvQPQWvfDsvNar~llpt~~Y~~G 416 (570)
T KOG2481|consen 344 LEFIIRSFGGKVSWDPLGIGATYDESDERITHQIVDRPGQQTSVIGR--TYVQPQWVFDSVNARLLLPTEKYFPG 416 (570)
T ss_pred HHHHHHHcCCceecCccCCCCcccccccceeeeeecccCccceeeee--eeecchhhhhhccchhhccHhhhCCC
Confidence 3456789999987652 45699999988655544332 67999999999999999999888755
No 99
>KOG2535 consensus RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Chromatin structure and dynamics; Transcription]
Probab=91.72 E-value=0.24 Score=50.65 Aligned_cols=50 Identities=18% Similarity=0.281 Sum_probs=43.8
Q ss_pred cCccccChHHHHHHHHHHHHHH-cCCcEEEEEeccccHHHHhhcccCcEEEEe
Q 048173 90 SIYQHKGVGRLLYLKLRKRLQS-VGIRTIFCWDDKESSFFFLKQVQDFASVAE 141 (359)
Q Consensus 90 ~~~QgkGIG~~Lv~~l~~~lk~-~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~e 141 (359)
..||+||+|++|++++|..|++ -|-.+|.+.+--....||.|. ||+..+.
T Consensus 497 ~KfQHQG~GtLLmeEAERIAr~EHgS~KiavISGVGtR~YY~kl--GY~LdGP 547 (554)
T KOG2535|consen 497 TKFQHQGFGTLLMEEAERIAREEHGSGKIAVISGVGTRNYYRKL--GYELDGP 547 (554)
T ss_pred hhhhhcchhhHHHHHHHHHHHHhcCCCceEEEeccchHHHHHhh--CeeecCh
Confidence 3689999999999999999985 578888888888899999999 9997664
No 100
>KOG1472 consensus Histone acetyltransferase SAGA/ADA, catalytic subunit PCAF/GCN5 and related proteins [Chromatin structure and dynamics; Transcription]
Probab=91.41 E-value=0.048 Score=59.65 Aligned_cols=98 Identities=23% Similarity=0.323 Sum_probs=81.0
Q ss_pred EEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcC-CcEEEEEeccccHHHHhhcccCcEEEEeec
Q 048173 65 VVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVG-IRTIFCWDDKESSFFFLKQVQDFASVAEVD 143 (359)
Q Consensus 65 IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~G-I~~I~l~a~~~A~~Fw~K~~~GF~~~~e~~ 143 (359)
+||.+....++. ..+.+|.+.||+.+-|-+|-|+-+++.+.++.++.+ |......|+..|.++|.|+ ||...-..+
T Consensus 431 ~vggi~~r~f~~-k~f~eivf~av~~~eqv~g~g~hlmnhlkd~~~~~~~i~~~ltyad~~aigyfkkq--gfs~ei~~~ 507 (720)
T KOG1472|consen 431 VVGGICFRPFPE-KGFTEIVFCAVTTDEQVKGSGTHLMNHLKDYVRSSSTIDYALTYADEGAIGYFKKQ--GFSKEIKFE 507 (720)
T ss_pred cccccccCcCcc-cCCcceeeccccCcccccccCcCchhhHHHHhhccchHHHHHHhhhhcccccccCc--cchhhcccc
Confidence 888888655554 368999999999999999999999999999999988 8888999999999999999 999543222
Q ss_pred c---cCcccCcchhhhhhhcCCCCcEEEecccccc
Q 048173 144 T---EGRAGRLPLRQKFRKSTEPERVVIDGCSREG 175 (359)
Q Consensus 144 ~---~g~~~~~~~~~~m~K~l~~~~~m~~~l~~~~ 175 (359)
. .| ..|...+||+|-|.+....
T Consensus 508 ~~~~~g----------~ikdye~~tl~~c~l~~~i 532 (720)
T KOG1472|consen 508 KSPYVG----------YIKDYEGGTLMPCELLPEI 532 (720)
T ss_pred cCcCcc----------ccccccCccccchhhccCc
Confidence 2 44 4455557799999999776
No 101
>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....
Probab=89.73 E-value=0.92 Score=41.57 Aligned_cols=58 Identities=16% Similarity=0.169 Sum_probs=45.5
Q ss_pred CCCCcEEEEEEeeecC-----CCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEE
Q 048173 60 LNLGKVVAAVIYQIVP-----ADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTI 117 (359)
Q Consensus 60 ~~~g~IVgvi~l~i~~-----~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I 117 (359)
...+++||-|...... .-...++|-+++||...|.|+++-.|++|+-.++...||=..
T Consensus 85 ~~~~kLvgfIsaip~~irv~~~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn~~gI~qA 147 (162)
T PF01233_consen 85 KSSKKLVGFISAIPATIRVRDKVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVNLQGIWQA 147 (162)
T ss_dssp TTTTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHTTT--EE
T ss_pred CCCCEEEEEEccceEEEEEeeeEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhhhcCceee
Confidence 3678999988754322 223779999999999999999999999999999999997443
No 102
>cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish. This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=89.25 E-value=0.79 Score=38.57 Aligned_cols=32 Identities=31% Similarity=0.366 Sum_probs=28.8
Q ss_pred CceeeeeEEEeccCccccChHHHHHHHHHHHH
Q 048173 78 TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRL 109 (359)
Q Consensus 78 ~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~l 109 (359)
...+++.-|||.++.||.|+|+.|++++.+..
T Consensus 32 ~~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d~ 63 (99)
T cd04265 32 DGVPYLDKFAVSSSAQGEGTGEALWRRLRRDF 63 (99)
T ss_pred CCceEEEEEEEchhhhhcChHHHHHHHHHhhC
Confidence 35789999999999999999999999888764
No 103
>KOG3524 consensus Predicted guanine nucleotide exchange factor (PEBBLE) [Signal transduction mechanisms]
Probab=89.24 E-value=0.29 Score=53.49 Aligned_cols=71 Identities=21% Similarity=0.302 Sum_probs=53.6
Q ss_pred CceEEEEcccCcchH-HHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc--cccCHHHHHHHHhCCCCCC
Q 048173 251 KCFRITLMNIADDSK-KVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS--WIVSPSWLKESFGEGRFVD 322 (359)
Q Consensus 251 ~~prI~fSgl~~e~k-k~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa--wIVsp~WL~eS~k~g~flD 322 (359)
.+...+|||+-+... .-.++..+||.|..| ..++||+|+....-+ |+-.|+. .++.|+||.++-+...|++
T Consensus 120 ~~vvlcfTg~rkk~e~lv~lvh~mgg~irkd~nsktthli~n~s~ge-k~~~a~t~~~~~rp~wv~~aw~~rn~~y 194 (850)
T KOG3524|consen 120 KDVVMCFTGERKKKEELVDLVHYMGGSIRKDTNSKTTHLIANKVEGE-KQSIALVGVPTMRPDWVTEAWKHRNDSY 194 (850)
T ss_pred cCceeeeeccchhhHHHHHHHHHhcceeEeeeccCceEEEeecccce-EEEEEeeccceechHhhhhhhcCcchhh
Confidence 345677999977432 236778999999988 899999999865443 4444444 9999999999988887753
No 104
>PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch. Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity
Probab=89.12 E-value=1.2 Score=38.95 Aligned_cols=76 Identities=18% Similarity=0.103 Sum_probs=47.1
Q ss_pred ceeeccCCCCcEEEEEE-----eeecCCCCceee------eeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEec
Q 048173 54 YKVVSFLNLGKVVAAVI-----YQIVPADTQYAE------VPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDD 122 (359)
Q Consensus 54 ~~~~~~~~~g~IVgvi~-----l~i~~~d~~~a~------I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~ 122 (359)
++.+..+..|.|+|..- |.+...++...+ |--|.|+++.||+|+|+.|.+..++ ..++.---+--+
T Consensus 9 l~d~~~~~~g~viG~LKVG~K~Lfl~d~~g~~~e~~~~~cvLDFyVhes~QR~G~Gk~LF~~ML~---~e~~~p~~~a~D 85 (120)
T PF05301_consen 9 LKDSEAGGKGAVIGFLKVGYKKLFLLDERGQHREIEPLLCVLDFYVHESRQRRGYGKRLFDHMLQ---EENVSPHQLAID 85 (120)
T ss_pred EEecCCCCCceEEEEEEEeeeeEEEEcCCCCEEEecccceeeeEEEEeceeccCchHHHHHHHHH---HcCCCcccceec
Confidence 55555567777887653 334444443333 4457899999999999999988765 445443333333
Q ss_pred cc---cHHHHhhc
Q 048173 123 KE---SSFFFLKQ 132 (359)
Q Consensus 123 ~~---A~~Fw~K~ 132 (359)
.- -.+|..|.
T Consensus 86 rPS~Kll~Fl~Kh 98 (120)
T PF05301_consen 86 RPSPKLLSFLKKH 98 (120)
T ss_pred CCcHHHHHHHHHh
Confidence 32 34566665
No 105
>PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase
Probab=88.61 E-value=0.42 Score=38.08 Aligned_cols=27 Identities=22% Similarity=0.231 Sum_probs=24.3
Q ss_pred eeEEEeccCccccChHHHHHHHHHHHH
Q 048173 83 VPLAAVSSIYQHKGVGRLLYLKLRKRL 109 (359)
Q Consensus 83 I~~~AV~~~~QgkGIG~~Lv~~l~~~l 109 (359)
|..+-|++.+|++||++.|++.+.+..
T Consensus 8 I~RIWV~~~~RR~GIAt~Lld~ar~~~ 34 (70)
T PF13880_consen 8 ISRIWVSPSHRRKGIATRLLDAARENF 34 (70)
T ss_pred eEEEEeChhhhhhhHHHHHHHHHHHhc
Confidence 788899999999999999999988754
No 106
>COG3375 Uncharacterized conserved protein [Function unknown]
Probab=88.29 E-value=2.1 Score=41.57 Aligned_cols=87 Identities=20% Similarity=0.230 Sum_probs=64.0
Q ss_pred cCCCCcEEEEEEeeecCCCCc-eeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc-----ccHHHHhhc
Q 048173 59 FLNLGKVVAAVIYQIVPADTQ-YAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK-----ESSFFFLKQ 132 (359)
Q Consensus 59 ~~~~g~IVgvi~l~i~~~d~~-~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~-----~A~~Fw~K~ 132 (359)
+..||++||...+....-.+. |-+=..++|.|++++.|+|-.|=..=.+.+.+.|+. .+.|++. +|.-=+.|+
T Consensus 52 f~~dg~lVGls~G~pg~r~g~~y~ySH~~gV~e~~k~sglg~aLK~~Qre~a~~~G~t-li~WTfDPl~alNA~fNi~KL 130 (266)
T COG3375 52 FSADGRLVGLSYGYPGGRGGSLYLYSHMLGVREEVKGSGLGVALKMKQRERALSMGYT-LIAWTFDPLNALNARFNISKL 130 (266)
T ss_pred EcCCCcEEEEEeccCCcCCCceeeeeeehhccccccccchhhhhHHHHHHHHHhcCee-eEEEecccchhhhhhcchhhh
Confidence 346669999999766332333 666778899999999999999999999999999995 5567776 344456677
Q ss_pred ccCcEEEEeecc-cCcc
Q 048173 133 VQDFASVAEVDT-EGRA 148 (359)
Q Consensus 133 ~~GF~~~~e~~~-~g~~ 148 (359)
|=....-.+. .|++
T Consensus 131 --Ga~artYi~nfYg~m 145 (266)
T COG3375 131 --GAIARTYIKNFYGEM 145 (266)
T ss_pred --ceeEEEeeccccchh
Confidence 7665555444 4433
No 107
>KOG3524 consensus Predicted guanine nucleotide exchange factor (PEBBLE) [Signal transduction mechanisms]
Probab=88.22 E-value=0.29 Score=53.58 Aligned_cols=96 Identities=18% Similarity=0.187 Sum_probs=72.6
Q ss_pred cccceeecccCCCCCceEEEEcccCcchH--HHHHHHhcCcEEecCCCCeeEEEeCCCCCcHHHHhhcc--cccCHHHHH
Q 048173 237 TSVVFVSKEFQPNGKCFRITLMNIADDSK--KVHLTKNLRGAVTSDGITSTHVVAGKVRKTLNFFTALS--WIVSPSWLK 312 (359)
Q Consensus 237 ~k~~~i~~~~~~~~~~prI~fSgl~~e~k--k~klik~LGG~V~~d~~~~THLVa~~~~RT~KfL~AIa--wIVsp~WL~ 312 (359)
.-.+-..++....-..-.+.|-|+.++.. .....+.-||....+.+.|||||.+.-+-+.+-+.--. .+|..+|..
T Consensus 198 ~~~~f~d~hrl~~feg~~~~f~gF~~ee~~~m~~sle~~gg~~a~~d~~cthvvv~e~~~~~~p~~~s~~~~~vk~ewfw 277 (850)
T KOG3524|consen 198 MEPCFVDKHRLGVFEGLSLFFHGFKQEEIDDMLRSLENTGGKLAPSDTLCTHVVVNEDNDEVEPLAVSSNQVHVKKEWFW 277 (850)
T ss_pred hccchhhhhccccccCCeEeecCCcHHHHHHHHHHHHhcCCcccCCCCCceeEeecCCccccccccccccceeecccceE
Confidence 33334555666666777888999988522 23456778999999999999999997655544443323 999999999
Q ss_pred HHHhCCCCCCCCcceecCcc
Q 048173 313 ESFGEGRFVDESFYMLNDDG 332 (359)
Q Consensus 313 eS~k~g~flDEe~Y~L~D~e 332 (359)
=+...|+|.-|..|.+.+-.
T Consensus 278 ~siq~g~~a~e~~yl~~~~~ 297 (850)
T KOG3524|consen 278 VSIQRGCCAIEDNYLLPTGK 297 (850)
T ss_pred EEEecchhccccceeccccc
Confidence 99999999999999988763
No 108
>COG5163 NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis]
Probab=87.78 E-value=0.47 Score=49.25 Aligned_cols=64 Identities=16% Similarity=0.239 Sum_probs=47.4
Q ss_pred hHHHHHHHhcCcEEecC------------CCCeeEEEeCCCCCcHHHHhhcccccCHHHHHHHHhCCCCCCCCcceec
Q 048173 264 SKKVHLTKNLRGAVTSD------------GITSTHVVAGKVRKTLNFFTALSWIVSPSWLKESFGEGRFVDESFYMLN 329 (359)
Q Consensus 264 ~kk~klik~LGG~V~~d------------~~~~THLVa~~~~RT~KfL~AIawIVsp~WL~eS~k~g~flDEe~Y~L~ 329 (359)
....=+|.++||.|..+ .+.+||-|++++.-.-|+--. --+.|+||.||+-.|.....+.|..+
T Consensus 365 dsLefiilscGG~V~~~p~~~~i~~~~~vD~~vth~i~drp~~~~kvegr--tYiQPQw~fDsiNkG~l~~~~~Y~~G 440 (591)
T COG5163 365 DSLEFIILSCGGSVVGSPCEADIHVSEKVDEKVTHQIVDRPVMKNKVEGR--TYIQPQWLFDSINKGKLACVENYCVG 440 (591)
T ss_pred hHHHHHHHHcCCcccCchhhccCCchhhccchhhhhhccchhhhhhhcce--eeechHHHHhhhccccchhhhhcccc
Confidence 33345678999988754 467899999887543333221 66899999999999999888888654
No 109
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=87.21 E-value=1.2 Score=42.44 Aligned_cols=47 Identities=13% Similarity=0.078 Sum_probs=43.6
Q ss_pred ChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEEeecc
Q 048173 96 GVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVAEVDT 144 (359)
Q Consensus 96 GIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~e~~~ 144 (359)
|-...|+..+.+.|++.|+.+|++.+.....++|+++ ||...+.++.
T Consensus 21 ~~~~~~~~~~~~~a~~~~~~ki~~~~~~~~~~~~~~~--g~~~e~~i~~ 67 (266)
T TIGR03827 21 NDVEALIPDLDALAKKEGYTKIIAKVPGSDKPLFEER--GYLEEAKIPG 67 (266)
T ss_pred ccHHHHHHHHHHHHHHcCCcEEEEEccHHHHHHHHHC--CCeEEEeccc
Confidence 5688999999999999999999999999999999999 9999888665
No 110
>KOG0966 consensus ATP-dependent DNA ligase IV [Replication, recombination and repair]
Probab=86.85 E-value=0.76 Score=51.04 Aligned_cols=60 Identities=25% Similarity=0.376 Sum_probs=44.6
Q ss_pred HHHHhcCcEEecC-------CCCeeEEEeCCC---CCcHHHHhhc----c-cccCHHHHHHHHhCCCCCCCCcce
Q 048173 268 HLTKNLRGAVTSD-------GITSTHVVAGKV---RKTLNFFTAL----S-WIVSPSWLKESFGEGRFVDESFYM 327 (359)
Q Consensus 268 klik~LGG~V~~d-------~~~~THLVa~~~---~RT~KfL~AI----a-wIVsp~WL~eS~k~g~flDEe~Y~ 327 (359)
-.++.+||.++.. ....||+|+-.+ .+..+...+- - .||+|+|+++|...+..++|+.|.
T Consensus 807 l~~k~~g~~i~~~~~~~~~~~~~~t~~v~~~i~~~h~~~~~~~~~~lt~~rkv~~~~wv~~s~~~~~~~~e~~~~ 881 (881)
T KOG0966|consen 807 LKLKNFGGRITDAQSECNNIGAKYTHCVLRCIDEDHEKIKEQKKASLTIKRKVVAPSWVDHSINENCLLPEEDFP 881 (881)
T ss_pred HHHHHhcceeeeccchhhhcccceeeeeeeecchHHHHHHHHHHHHhcccccccCHHHHHHhhcccccCccccCC
Confidence 3467889998875 556799998632 2333333332 2 899999999999999999999983
No 111
>PRK01305 arginyl-tRNA-protein transferase; Provisional
Probab=84.05 E-value=4 Score=39.47 Aligned_cols=56 Identities=16% Similarity=0.268 Sum_probs=46.3
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEE
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFC 119 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l 119 (359)
++|++|||+..-+.+..- .-| .++-||++-..++|+..+..-.+.|+++|.+.+.+
T Consensus 151 ~~g~LiaVav~D~l~d~l--SAV-Y~FyDPd~~~~SLG~~~iL~qI~~ak~~gl~y~YL 206 (240)
T PRK01305 151 GDGKLVAVAVTDVLDDGL--SAV-YTFYDPDEEHRSLGTFAILWQIELAKRLGLPYVYL 206 (240)
T ss_pred eCCeEEEEEEEeccCCce--eeE-EEeeCCCccccCCHHHHHHHHHHHHHHcCCCeEee
Confidence 689999999876666532 436 45569999999999999999999999999988864
No 112
>PF02474 NodA: Nodulation protein A (NodA); InterPro: IPR003484 Rhizobial nodulation (Nod) factors are signalling molecules secreted by root-nodulating rhizobia in response to flavanoids excreted by the host plant. They induce various symbiotic responses on the roots of the leguminous host plant at low concentrations, and are required for successful infection. Rhizobial Nod factors are lipo-chitooligosaccharides carrying various substituents which are important determinants of host specificity []. NodA is an N-acyl transferase which specifies the transfer of an acyl chain to the oligosaccharide backbone of Nod factor. Allelic variation of the nodA gene can contribute to the determination of host range [].; GO: 0016746 transferase activity, transferring acyl groups
Probab=79.53 E-value=2.2 Score=39.90 Aligned_cols=53 Identities=17% Similarity=0.080 Sum_probs=46.7
Q ss_pred ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhc
Q 048173 79 QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQ 132 (359)
Q Consensus 79 ~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~ 132 (359)
=-||++..+|.|+.+|.|||..| ..+.-.|+++|+...|--++..=..++++.
T Consensus 84 LVaElGLygVRpDLEGlGi~hs~-r~m~PvLq~LgVPF~FGtVR~al~~Hv~R~ 136 (196)
T PF02474_consen 84 LVAELGLYGVRPDLEGLGISHSM-RVMYPVLQELGVPFGFGTVRHALRNHVERL 136 (196)
T ss_pred eEEEEEEEEeeccccccccchhh-hhhhhHHHhcCCCeecccchHHHHHHHHHH
Confidence 35889999999999999999987 699999999999999998888766777766
No 113
>PRK06195 DNA polymerase III subunit epsilon; Validated
Probab=79.14 E-value=3.2 Score=40.87 Aligned_cols=43 Identities=19% Similarity=0.127 Sum_probs=34.2
Q ss_pred CCCceEEEEcccCcc---hHHHHHHHhcCcEEecC-CCCeeEEEeCC
Q 048173 249 NGKCFRITLMNIADD---SKKVHLTKNLRGAVTSD-GITSTHVVAGK 291 (359)
Q Consensus 249 ~~~~prI~fSgl~~e---~kk~klik~LGG~V~~d-~~~~THLVa~~ 291 (359)
+-.+.+|+|||--.. .+-.++++.+||.|+++ ..++|.||++.
T Consensus 220 ~l~g~~~vfTG~l~~~~R~~~~~~~~~~Gg~v~~sVs~~t~~lV~G~ 266 (309)
T PRK06195 220 AFKEEVVVFTGGLASMTRDEAMILVRRLGGTVGSSVTKKTTYLVTNT 266 (309)
T ss_pred cccCCEEEEccccCCCCHHHHHHHHHHhCCEecCCcccCceEEEECC
Confidence 456779999987642 33358899999999999 78899999985
No 114
>PRK14351 ligA NAD-dependent DNA ligase LigA; Provisional
Probab=77.05 E-value=7.4 Score=42.94 Aligned_cols=67 Identities=12% Similarity=0.030 Sum_probs=49.1
Q ss_pred CCceEEEEcccCcc---hHHHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHh
Q 048173 250 GKCFRITLMNIADD---SKKVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFG 316 (359)
Q Consensus 250 ~~~prI~fSgl~~e---~kk~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k 316 (359)
-.+..|+|||.-.. ....++++.+||.|+++ ..+++.||++.-...-|+-.|-. .|++.+-+.+-++
T Consensus 610 l~g~~~v~TG~l~~~~R~~~~~~i~~~Gg~v~~sVs~kt~~Lv~G~~~g~sKl~kA~~lgi~ii~E~~f~~ll~ 683 (689)
T PRK14351 610 LDGLTFVFTGSLSGYTRSEAQELVEAHGGNATGSVSGNTDYLVVGENPGQSKRDDAEANDVPTLDEEEFEELLA 683 (689)
T ss_pred CCCcEEEEccCCCCCCHHHHHHHHHHcCCEEcCCcCCCccEEEEcCCCChhHHHHHHHCCCeEecHHHHHHHHH
Confidence 45678999987643 33357899999999999 78899999997544346666644 8888776665444
No 115
>PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain
Probab=75.94 E-value=3.2 Score=34.02 Aligned_cols=39 Identities=26% Similarity=0.324 Sum_probs=30.6
Q ss_pred cEEEEEEeeecCCC---------------------CceeeeeEEEeccCccccChHHHHH
Q 048173 64 KVVAAVIYQIVPAD---------------------TQYAEVPLAAVSSIYQHKGVGRLLY 102 (359)
Q Consensus 64 ~IVgvi~l~i~~~d---------------------~~~a~I~~~AV~~~~QgkGIG~~Lv 102 (359)
++||+++++..... ...+||..+||+++||+..+-..|.
T Consensus 41 ~~VGt~Rl~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~~EisRl~V~~~~R~~~~~~~L~ 100 (101)
T PF13444_consen 41 EVVGTVRLILPSPAGPLEGFYSESEFDLDPLLPLPRRVAEISRLCVHPEYRRRKVLLLLW 100 (101)
T ss_pred CEEEEEEeeccccccccccCCchhhcCcchhhccCCcEEEeehheECHhHCCChHHHHHh
Confidence 59999998765441 2678999999999999977766654
No 116
>PRK07956 ligA NAD-dependent DNA ligase LigA; Validated
Probab=75.09 E-value=9.1 Score=42.03 Aligned_cols=67 Identities=15% Similarity=0.125 Sum_probs=49.2
Q ss_pred CCceEEEEcccCcc---hHHHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHHHHhC
Q 048173 250 GKCFRITLMNIADD---SKKVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKESFGE 317 (359)
Q Consensus 250 ~~~prI~fSgl~~e---~kk~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~eS~k~ 317 (359)
-.+.+|+|||.-+. ....++++.+||.|+++ ..+++.||++.-. +-|+-.|-. .|++.+-+.+-+.+
T Consensus 591 ~~g~~~v~TG~l~~~~R~e~~~~i~~~G~~v~~sVs~kt~~lv~G~~~-gsK~~kA~~lgI~ii~E~~f~~~l~~ 664 (665)
T PRK07956 591 LAGKTVVLTGTLEQLSRDEAKEKLEALGAKVSGSVSKKTDLVVAGEAA-GSKLAKAQELGIEVLDEEEFLRLLGE 664 (665)
T ss_pred ccccEEEEeCCCCCCCHHHHHHHHHHcCCEEeCcccCCCCEEEECCCC-ChHHHHHHHcCCeEEcHHHHHHHHhc
Confidence 45689999998653 33357899999999999 6788889998643 356666654 88888777665543
No 117
>PRK06063 DNA polymerase III subunit epsilon; Provisional
Probab=74.57 E-value=9 Score=38.02 Aligned_cols=63 Identities=13% Similarity=0.051 Sum_probs=44.7
Q ss_pred CceEEEEcccCcc--hHHHHHHHhcCcEEecC-CCCeeEEEeCCCC-CcHHHHhhcc---cccCHHHHHH
Q 048173 251 KCFRITLMNIADD--SKKVHLTKNLRGAVTSD-GITSTHVVAGKVR-KTLNFFTALS---WIVSPSWLKE 313 (359)
Q Consensus 251 ~~prI~fSgl~~e--~kk~klik~LGG~V~~d-~~~~THLVa~~~~-RT~KfL~AIa---wIVsp~WL~e 313 (359)
.+.+|+|||--.. .+.+++++.+||.|.++ ..+++.||++... .+-|.-.|-. .|++.+=+.+
T Consensus 234 ~g~~~v~TG~l~~~R~e~~~~~~~~G~~v~~sVs~~t~~lv~g~~~~~ssK~~kA~~~gi~ii~e~~f~~ 303 (313)
T PRK06063 234 QGMRVALSAEVSRTHEELVERILHAGLAYSDSVDRDTSLVVCNDPAPEQGKGYHARQLGVPVLDEAAFLE 303 (313)
T ss_pred CCCEEEEecCCCCCHHHHHHHHHHcCCEecCccccCccEEEECCCCCcccHHHHHHHcCCccccHHHHHH
Confidence 5678999987542 33457899999999999 7889999998643 2356655544 7777654443
No 118
>TIGR00575 dnlj DNA ligase, NAD-dependent. The member of this family from Treponema pallidum differs in having three rather than just one copy of the BRCT (BRCA1 C Terminus) domain (pfam00533) at the C-terminus. It is included in the seed.
Probab=70.86 E-value=8.4 Score=42.16 Aligned_cols=58 Identities=21% Similarity=0.225 Sum_probs=41.7
Q ss_pred CceEEEEcccCcc---hHHHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc---cccCHH
Q 048173 251 KCFRITLMNIADD---SKKVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS---WIVSPS 309 (359)
Q Consensus 251 ~~prI~fSgl~~e---~kk~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa---wIVsp~ 309 (359)
.+-.|+|||.-+. ....++++.+||.|+++ ..+++.||++.-.-+ |+-.|.. .|++.+
T Consensus 586 ~gk~~v~TG~l~~~~R~~~~~~i~~~G~~v~~sVs~kt~~lv~G~~~gs-Kl~kA~~lgi~ii~E~ 650 (652)
T TIGR00575 586 AGKTFVLTGTLSQMSRDEAKELLENLGGKVASSVSKKTDYVIAGEKAGS-KLAKAQELGIPIINEE 650 (652)
T ss_pred cCcEEEEeccCCCCCHHHHHHHHHHcCCEEeCCcCCCccEEEECCCCCh-HHHHHHHcCCcEechh
Confidence 4568999997542 33457899999999999 788999999974433 7666654 555543
No 119
>COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=68.62 E-value=36 Score=32.57 Aligned_cols=78 Identities=17% Similarity=0.156 Sum_probs=57.9
Q ss_pred CCCCcEEEEEEeeec-------------------CCCCceeeeeEEEecc--CccccC----hHHHHHHHHHHHHHHcCC
Q 048173 60 LNLGKVVAAVIYQIV-------------------PADTQYAEVPLAAVSS--IYQHKG----VGRLLYLKLRKRLQSVGI 114 (359)
Q Consensus 60 ~~~g~IVgvi~l~i~-------------------~~d~~~a~I~~~AV~~--~~QgkG----IG~~Lv~~l~~~lk~~GI 114 (359)
..+|+|+||.++--. |.+..+-|.-.|||+. .-++.| ++..|+-.+.+.++..|+
T Consensus 59 ~~~g~I~G~~RlLptt~P~mL~~vF~~Ll~~~~~P~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el~~g~ie~a~~~G~ 138 (209)
T COG3916 59 TSDGRIVGCVRLLPTTGPYMLTDVFPALLEGGPPPSSPGVWESSRFAVDKPSARRAAGGVSPAAYELFAGMIEYALARGI 138 (209)
T ss_pred cCCCcEEEEEEeccCCCcchhhhhhHHHhcCCCCCCCCCeEEEeeeeeccccchhhcCCccHHHHHHHHHHHHHHHHcCC
Confidence 588999999996421 1133666777889997 322222 467888999999999999
Q ss_pred cEEEEEeccccHHHHhhcccCcEEE
Q 048173 115 RTIFCWDDKESSFFFLKQVQDFASV 139 (359)
Q Consensus 115 ~~I~l~a~~~A~~Fw~K~~~GF~~~ 139 (359)
++|+.+++..=+.-+.+. ||...
T Consensus 139 ~~IvtVt~~~meril~r~--Gw~~~ 161 (209)
T COG3916 139 TGIVTVTDTGMERILRRA--GWPLT 161 (209)
T ss_pred ceEEEEEchHHHHHHHHc--CCCeE
Confidence 999999997666677777 88753
No 120
>COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only]
Probab=68.35 E-value=5.9 Score=42.01 Aligned_cols=77 Identities=17% Similarity=0.186 Sum_probs=54.0
Q ss_pred eeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEE-------ecc-ccHHHHhhcccCcEEEEeecccCcccCc
Q 048173 80 YAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCW-------DDK-ESSFFFLKQVQDFASVAEVDTEGRAGRL 151 (359)
Q Consensus 80 ~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~-------a~~-~A~~Fw~K~~~GF~~~~e~~~~g~~~~~ 151 (359)
-|.|-...|||+||+-|+|++-+.++.+-..+.-|...+-- +.- .=.+||++. ||...=+...--+.--.
T Consensus 241 aariarvvvhpdyr~dglg~~sv~~a~ewI~eRriPEmr~rkHlvetiaqmarynpffe~~--gfkylwdtasGrPvl~~ 318 (593)
T COG2401 241 AARIARVVVHPDYRADGLGQLSVIAALEWIIERRIPEMRPRKHLVETIAQMARYNPFFEKV--GFKYLWDTASGRPVLPT 318 (593)
T ss_pred hhheeEEEeccccccCccchhHHHHHHHHHHHhhChhhhhhhhHHHHHHHHHhcCchhhhh--ceeeeeecCCCCeeecc
Confidence 36688899999999999999999999999998888776322 111 137999999 99976543332233333
Q ss_pred chhhhhh
Q 048173 152 PLRQKFR 158 (359)
Q Consensus 152 ~~~~~m~ 158 (359)
++..+.+
T Consensus 319 plteEa~ 325 (593)
T COG2401 319 PLTEEAK 325 (593)
T ss_pred chhHHHH
Confidence 4444333
No 121
>PRK14350 ligA NAD-dependent DNA ligase LigA; Provisional
Probab=68.18 E-value=13 Score=40.88 Aligned_cols=63 Identities=11% Similarity=-0.049 Sum_probs=45.4
Q ss_pred CCceEEEEcccCcc---hHHHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhc--c-cccCHHHHHH
Q 048173 250 GKCFRITLMNIADD---SKKVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTAL--S-WIVSPSWLKE 313 (359)
Q Consensus 250 ~~~prI~fSgl~~e---~kk~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AI--a-wIVsp~WL~e 313 (359)
-.+-.|+|||--.. ....++++++||.|+++ ..+++.||++.-.- -|+-.|- . .|++.+.+.+
T Consensus 594 l~gktfV~TG~l~~~~R~e~~~lie~~Ggkv~ssVSkktd~LV~G~~aG-sKl~KA~~LGI~Ii~e~~f~~ 663 (669)
T PRK14350 594 LFGKKFCITGSFNGYSRSVLIDKLTKKGAIFNTCVTKYLDFLLVGEKAG-LKLKKANNLGIKIMSLFDIKS 663 (669)
T ss_pred cCCcEEEEecccCCCCHHHHHHHHHHcCCEEeccccCCCcEEEECCCCC-chHHHHHHcCCEEecHHHHHH
Confidence 34568999985432 34458899999999999 77899999985332 3555554 4 8888887765
No 122
>COG2935 Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=65.81 E-value=22 Score=34.91 Aligned_cols=56 Identities=20% Similarity=0.326 Sum_probs=46.8
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEE
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFC 119 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l 119 (359)
-.|++|||.+.-+-+.+- --| .++-||++....+|+..+..=...|++.|.+.|++
T Consensus 158 ~~G~LvAVavtDvL~dGl--SsV-Y~FydPd~s~~SLGt~~iL~~I~~aq~~~l~yvYL 213 (253)
T COG2935 158 GEGKLVAVAVTDVLPDGL--SSV-YTFYDPDMSKRSLGTLSILDQIAIAQRLGLPYVYL 213 (253)
T ss_pred CCCcEEEEEeeecccCcc--eeE-EEEeCCChhhhcchHHHHHHHHHHHHHhCCCeEEE
Confidence 588999998877777643 324 45569999999999999999999999999999976
No 123
>PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus. These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A ....
Probab=65.66 E-value=8.1 Score=36.29 Aligned_cols=35 Identities=23% Similarity=0.187 Sum_probs=29.5
Q ss_pred ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCC
Q 048173 79 QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGI 114 (359)
Q Consensus 79 ~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI 114 (359)
++. +-++.|-|-||++|.|+.|++---+.++..|.
T Consensus 80 ~~N-LsCIl~lP~yQrkGyG~~LI~fSY~LSr~e~~ 114 (188)
T PF01853_consen 80 NNN-LSCILTLPPYQRKGYGRFLIDFSYELSRREGK 114 (188)
T ss_dssp -EE-ESEEEE-GGGTTSSHHHHHHHHHHHHHHHTTS
T ss_pred Cee-EeehhhcchhhhcchhhhhhhhHHHHhhccCc
Confidence 445 88999999999999999999999888888774
No 124
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
Probab=65.48 E-value=16 Score=40.22 Aligned_cols=65 Identities=15% Similarity=0.103 Sum_probs=46.3
Q ss_pred CCCCceEEEEcccCcc---hHHHHHHHhcCcEEecC-CCCeeEEEeCCCCCcHHHHhhcc---cccCHHHHHH
Q 048173 248 PNGKCFRITLMNIADD---SKKVHLTKNLRGAVTSD-GITSTHVVAGKVRKTLNFFTALS---WIVSPSWLKE 313 (359)
Q Consensus 248 ~~~~~prI~fSgl~~e---~kk~klik~LGG~V~~d-~~~~THLVa~~~~RT~KfL~AIa---wIVsp~WL~e 313 (359)
++-.+-.|+|||--+. +.-+.++++|||+|+.+ ..+++.||+|...-+ |+-.|.. -|++.+++.+
T Consensus 593 ~~l~gkt~V~TGtL~~~sR~eak~~le~lGakv~~SVSkktD~vvaG~~aGS-Kl~kA~eLgv~i~~E~~~~~ 664 (667)
T COG0272 593 SPLAGKTFVLTGTLEGMSRDEAKALLEALGAKVSGSVSKKTDYVVAGENAGS-KLAKAQELGVKIIDEEEFLA 664 (667)
T ss_pred cccCCCEEEEeccCCCCCHHHHHHHHHHcCCEEeceecccccEEEEcCCCCh-HHHHHHHcCCeEecHHHHHH
Confidence 3445567888876542 22346789999999999 667777888876555 7777755 8888887764
No 125
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated. Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members
Probab=62.49 E-value=19 Score=35.16 Aligned_cols=74 Identities=20% Similarity=0.112 Sum_probs=53.9
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEecc---ccHHHHhhcccCcE
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDK---ESSFFFLKQVQDFA 137 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~---~A~~Fw~K~~~GF~ 137 (359)
.+|++||++.+... .+ ....+..+-++++++.+-+..|+-++.+.+++.|++..-.-... ....|=.+. ||+
T Consensus 203 ~~g~~va~~l~~~~-~~--~~~~~~~g~~~~~~~~~~~~lL~w~~i~~a~~~G~~~fDfG~s~~~~G~~~FK~~~--G~~ 277 (330)
T TIGR03019 203 GDGVVASAVLSFYF-RD--EVLPYYAGGLREARDVAANDLMYWELMRRACERGLRVFDFGRSKRGTGPFKFKKNW--GFE 277 (330)
T ss_pred CCCCEEEEEEEEEe-CC--EEEEEeccChHHHHhhChHHHHHHHHHHHHHHCCCcEEEcCCCCCCCccHHHHhcC--CCe
Confidence 58889988774333 22 24445777889999999999999999999999999877553322 234566677 887
Q ss_pred EE
Q 048173 138 SV 139 (359)
Q Consensus 138 ~~ 139 (359)
.+
T Consensus 278 ~~ 279 (330)
T TIGR03019 278 PQ 279 (330)
T ss_pred ec
Confidence 53
No 126
>PRK00756 acyltransferase NodA; Provisional
Probab=60.95 E-value=12 Score=35.08 Aligned_cols=45 Identities=20% Similarity=0.183 Sum_probs=39.1
Q ss_pred ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc
Q 048173 79 QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE 124 (359)
Q Consensus 79 ~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~ 124 (359)
=-||++..+|.||.+|.||+..| ..+.-.|+++|+...|--++..
T Consensus 84 LVaElGLygVRpDLEGlGi~~S~-r~m~PvLq~LgVPF~FGtVR~a 128 (196)
T PRK00756 84 LVAELGLYGVRPDLEGLGIAHSI-RAMYPVLQELGVPFAFGTVRHA 128 (196)
T ss_pred eEEEeeeeeeccccccccchhhH-HHHHHHHHhcCCCeecccchHH
Confidence 45889999999999999999987 6999999999999887666653
No 127
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=59.61 E-value=11 Score=40.45 Aligned_cols=75 Identities=20% Similarity=0.107 Sum_probs=59.1
Q ss_pred CCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc-----cHHHHhhcccCc
Q 048173 62 LGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE-----SSFFFLKQVQDF 136 (359)
Q Consensus 62 ~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~-----A~~Fw~K~~~GF 136 (359)
|+=|||++...-.. .--+|+-|..+=-.=|++|=+.|+..+++.|.+.||.+|...-..+ -..||+.+ ||
T Consensus 471 DnGiigvviv~kk~---~~w~IDt~lmSCRVlgRkvE~~l~~~~~e~A~~~gi~tir~~Y~pt~kN~pv~~FyE~m--gf 545 (574)
T COG3882 471 DNGIIGVVIVEKKE---SEWFIDTFLMSCRVLGRKVEQRLMNSLEEQALSEGINTIRGYYIPTEKNAPVSDFYERM--GF 545 (574)
T ss_pred cCceEEEEEEEecC---CeEEhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeEecccccCCcHHHHHHHh--cc
Confidence 34477877743333 2356888888888889999999999999999999999997765553 67899999 99
Q ss_pred EEEEe
Q 048173 137 ASVAE 141 (359)
Q Consensus 137 ~~~~e 141 (359)
...+|
T Consensus 546 ~l~~e 550 (574)
T COG3882 546 KLKGE 550 (574)
T ss_pred ccccc
Confidence 95554
No 128
>PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2.7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A.
Probab=56.62 E-value=28 Score=31.92 Aligned_cols=47 Identities=21% Similarity=0.127 Sum_probs=33.5
Q ss_pred cEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHHHHH
Q 048173 64 KVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQ 110 (359)
Q Consensus 64 ~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk 110 (359)
+.+|++...-...+...+++.-|||.+..||.|++..|.+++.+.-.
T Consensus 72 ~~~AIVt~e~~~~~~~v~yLdKFav~~~~~g~gv~D~vf~~i~~d~p 118 (170)
T PF04768_consen 72 EGAAIVTPEGPDSNGPVPYLDKFAVSKSAQGSGVADNVFNAIRKDFP 118 (170)
T ss_dssp SEEEEEEEE-SCTCTSEEEEEEEEE-HHHHHTTHHHHHHHHHHHH-S
T ss_pred eEEEEEEecCCCCCCCCeEEEEEEecchhhhcCHHHHHHHHHHHhcc
Confidence 45555542112234579999999999999999999999999966543
No 129
>cd04266 DUF619-NAGS-FABP DUF619 domain of N-acetylglutamate Synthase of the fungal arginine-biosynthetic pathway. DUF619-NAGS-FABP: This family includes the DUF619 domain of N-acetylglutamate synthase (NAGS) of the fungal arginine-biosynthetic pathway (FABP). This NAGS (also known as arginine-requiring protein 2 or ARG2) consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. NAGS catalyzes the formation of NAG from acetylcoenzyme A and L-glutamate. The DUF619 domain, yet to be characterized, is predicted to function in NAGS association in fungi.
Probab=53.90 E-value=33 Score=29.49 Aligned_cols=30 Identities=20% Similarity=0.204 Sum_probs=27.7
Q ss_pred CceeeeeEEEeccCccc-cChHHHHHHHHHH
Q 048173 78 TQYAEVPLAAVSSIYQH-KGVGRLLYLKLRK 107 (359)
Q Consensus 78 ~~~a~I~~~AV~~~~Qg-kGIG~~Lv~~l~~ 107 (359)
...+++.-|||.+.-|| .|++..+.+++.+
T Consensus 37 ~~v~yLdKFav~~~~~gl~gv~D~vf~~m~~ 67 (108)
T cd04266 37 EKIAYLDKFAVLPKAQGSDGIADILFNAMLD 67 (108)
T ss_pred CCceEEEEEEEccccccccchHHHHHHHHHH
Confidence 57899999999999997 8999999998887
No 130
>COG5275 BRCT domain type II [General function prediction only]
Probab=50.90 E-value=28 Score=33.92 Aligned_cols=44 Identities=20% Similarity=0.108 Sum_probs=34.0
Q ss_pred CCCCceEEEEcccCcc---hHHHHHHHhcCcEEecC-CCCeeEEEeCC
Q 048173 248 PNGKCFRITLMNIADD---SKKVHLTKNLRGAVTSD-GITSTHVVAGK 291 (359)
Q Consensus 248 ~~~~~prI~fSgl~~e---~kk~klik~LGG~V~~d-~~~~THLVa~~ 291 (359)
.......|+|||.-+. +.-..+++.+||.|+.. ..++|.||.+.
T Consensus 155 ~cL~G~~fVfTG~l~TlsR~~a~~lvk~yGgrvT~~pSskTtflvlGd 202 (276)
T COG5275 155 ECLKGKVFVFTGDLKTLSRDDAKTLVKVYGGRVTAVPSSKTTFLVLGD 202 (276)
T ss_pred ccccccEEEEecccccccchhHHHHHHHhCCeeecccccceeEEEecC
Confidence 4456678999999773 22347889999999988 67788889885
No 131
>KOG2036 consensus Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=49.35 E-value=17 Score=40.80 Aligned_cols=32 Identities=25% Similarity=0.238 Sum_probs=28.3
Q ss_pred eeeeEEEeccCccccChHHHHHHHHHHHHHHc
Q 048173 81 AEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSV 112 (359)
Q Consensus 81 a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~ 112 (359)
|.|-.+||||+||+.|-|++-++-|.++..-.
T Consensus 615 aRIVRIAvhP~y~~MGYGsrAvqLL~~y~eG~ 646 (1011)
T KOG2036|consen 615 ARIVRIAVHPEYQKMGYGSRAVQLLTDYFEGK 646 (1011)
T ss_pred ceEEEEEeccchhccCccHHHHHHHHHHHhcc
Confidence 57889999999999999999999998887643
No 132
>PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine. This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A.
Probab=47.68 E-value=50 Score=33.76 Aligned_cols=63 Identities=16% Similarity=0.026 Sum_probs=38.0
Q ss_pred EeeecCCCCceeeeeEEEeccCccccChHHHHHHHHHH---HHHHcCCcEEEEEecc-----ccHHHHhhc
Q 048173 70 IYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLRK---RLQSVGIRTIFCWDDK-----ESSFFFLKQ 132 (359)
Q Consensus 70 ~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~---~lk~~GI~~I~l~a~~-----~A~~Fw~K~ 132 (359)
.|+++..-+...||.-++++|+||+-|.|++|-..=.- .-++.=-.+|+..-+- .-.|||+-.
T Consensus 111 ~L~L~~d~tG~sEl~tLfL~p~~R~~~~G~lLSr~RfLFiA~~~~rF~~~viAElrG~~De~G~SPFWdal 181 (342)
T PF04958_consen 111 TLTLSNDYTGCSELCTLFLDPDYRGGGNGRLLSRSRFLFIAQHRERFADRVIAELRGVSDEDGRSPFWDAL 181 (342)
T ss_dssp EEEEE-TTTTSEEEEEEEE-GGGTTSHHHHHHHHHHHHHHHH-GGGS-SEEEEE--B---TT---HHHHHT
T ss_pred eEeeecCCCCCeeeEEEEECHHHcCCchHHHHHHHHHHHHHhChhhcchheeeeccCCcCCCCCCchHHHh
Confidence 44555555567899999999999999999998765322 2223333455443322 478999998
No 133
>PLN03238 probable histone acetyltransferase MYST; Provisional
Probab=47.63 E-value=17 Score=36.39 Aligned_cols=32 Identities=22% Similarity=0.221 Sum_probs=29.2
Q ss_pred eeEEEeccCccccChHHHHHHHHHHHHHHcCC
Q 048173 83 VPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGI 114 (359)
Q Consensus 83 I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI 114 (359)
+-++.|-|-||++|.|+.|++---+..+..|.
T Consensus 158 LaCIltLPpyQrkGyG~~LI~fSYeLSr~Eg~ 189 (290)
T PLN03238 158 LACILTLPPYQRKGYGKFLISFAYELSKREGK 189 (290)
T ss_pred EEEEEecChhhhccHhHhHHHHHhHHhhccCC
Confidence 78899999999999999999999888888873
No 134
>cd03173 DUF619-like DUF619 domain of various N-acetylglutamate Kinases and N-acetylglutamate Synthases. DUF619-like: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. This subgroup also includes the DUF619 domain of the FABP N-acetylglutamate kinase (NAGK), the enzyme that catalyzes the second reaction of arginine
Probab=44.51 E-value=58 Score=27.48 Aligned_cols=32 Identities=19% Similarity=0.101 Sum_probs=28.6
Q ss_pred CCceeeeeEEEeccCccccChHHHHHHHHHHH
Q 048173 77 DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKR 108 (359)
Q Consensus 77 d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~ 108 (359)
+...+++.-|+|.+.-++.|++..+.+++.+.
T Consensus 30 ~~~v~~LdkFav~~~~~~~gv~D~vf~~i~~d 61 (98)
T cd03173 30 GNSIPYLDKFAVSDHLWLNNVTDNIFNLIRKD 61 (98)
T ss_pred CCCCEEEEEEEEcccccccCHHHHHHHHHHhh
Confidence 35689999999999999999999999988766
No 135
>PF13264 DUF4055: Domain of unknown function (DUF4055)
Probab=42.52 E-value=43 Score=29.52 Aligned_cols=50 Identities=18% Similarity=0.155 Sum_probs=39.5
Q ss_pred CCcEEEEEEeeecCCCCceeeeeEEEeccCccccChH--HHHHHHHHHHHHHcCCcEEE
Q 048173 62 LGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVG--RLLYLKLRKRLQSVGIRTIF 118 (359)
Q Consensus 62 ~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG--~~Lv~~l~~~lk~~GI~~I~ 118 (359)
++-.||.......|.|.+..++ +++|.+|. +.-+++++++++.+|.+-+.
T Consensus 42 ~~i~vG~~~~~~lp~~~~~~yv-------e~~g~~i~a~~~~l~~~e~qM~~lGa~ll~ 93 (138)
T PF13264_consen 42 DGIVVGSSSALDLPEGGDAGYV-------EHTGSAIAAGREALDDLENQMRQLGARLLE 93 (138)
T ss_pred CCeEEeCCcceeCCCCCceeEE-------ecCchhHHHHHHHHHHHHHHHHHhhhhhcC
Confidence 4678888777778887665544 45688888 99999999999999998553
No 136
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=42.25 E-value=39 Score=32.46 Aligned_cols=42 Identities=17% Similarity=0.097 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEEecc------ccHHHHhhcccCcEEEEe
Q 048173 98 GRLLYLKLRKRLQSVGIRTIFCWDDK------ESSFFFLKQVQDFASVAE 141 (359)
Q Consensus 98 G~~Lv~~l~~~lk~~GI~~I~l~a~~------~A~~Fw~K~~~GF~~~~e 141 (359)
...-..++.+.|+.+|+++|.+.+-. .-..||++. ||++...
T Consensus 104 ~tt~~~A~~~AL~alg~~RIalvTPY~~~v~~~~~~~l~~~--G~eV~~~ 151 (239)
T TIGR02990 104 VVTPSSAAVDGLAALGVRRISLLTPYTPETSRPMAQYFAVR--GFEIVNF 151 (239)
T ss_pred eeCHHHHHHHHHHHcCCCEEEEECCCcHHHHHHHHHHHHhC--CcEEeee
Confidence 44556778889999999999988765 378999999 9999775
No 137
>KOG4601 consensus Uncharacterized conserved protein [Function unknown]
Probab=41.73 E-value=22 Score=34.82 Aligned_cols=27 Identities=22% Similarity=0.038 Sum_probs=23.7
Q ss_pred eeeeEEEeccCccccChHHHHHHHHHH
Q 048173 81 AEVPLAAVSSIYQHKGVGRLLYLKLRK 107 (359)
Q Consensus 81 a~I~~~AV~~~~QgkGIG~~Lv~~l~~ 107 (359)
-.|=-|+||++.||.|.|+.|++...+
T Consensus 109 lcILDFyVheS~QR~G~G~~lfdyMl~ 135 (264)
T KOG4601|consen 109 LCILDFYVHESEQRSGNGFKLFDYMLK 135 (264)
T ss_pred ceEEEEEeehhhhhcCchHHHHHHHHH
Confidence 348889999999999999999998765
No 138
>PLN03239 histone acetyltransferase; Provisional
Probab=41.58 E-value=20 Score=36.72 Aligned_cols=32 Identities=19% Similarity=0.076 Sum_probs=29.1
Q ss_pred eeEEEeccCccccChHHHHHHHHHHHHHHcCC
Q 048173 83 VPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGI 114 (359)
Q Consensus 83 I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI 114 (359)
+-++.|-|-||++|.|+.|++---+..+..|.
T Consensus 216 LaCIltLPpyQrkGyG~lLI~fSYeLSr~Eg~ 247 (351)
T PLN03239 216 LACILTFPAHQRKGYGRFLIAFSYELSKKEEK 247 (351)
T ss_pred eEEEEecChhhhcchhhhhHhhhhHhhhhcCC
Confidence 77899999999999999999998888888774
No 139
>KOG2696 consensus Histone acetyltransferase type b catalytic subunit [Chromatin structure and dynamics]
Probab=37.99 E-value=64 Score=33.58 Aligned_cols=50 Identities=20% Similarity=0.282 Sum_probs=35.7
Q ss_pred CCceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccc-cHHH
Q 048173 77 DTQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKE-SSFF 128 (359)
Q Consensus 77 d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~-A~~F 128 (359)
|.-++-|-.|-+-|.|||+|+|+.|++++...... -++|+-.+... ++.|
T Consensus 214 d~~R~RiSQmlilpPfq~~Glgs~l~E~i~r~~~~--~p~v~DiTVEdPse~F 264 (403)
T KOG2696|consen 214 DRIRPRISQMLILPPFQGKGLGSQLYEAIARDYLE--EPTVLDITVEDPSEAF 264 (403)
T ss_pred hhhhhhhheeEEeccccCCchHHHHHHHHHHhhcc--CCceeEEEecCchHHH
Confidence 55667788999999999999999999998744432 24555555543 4444
No 140
>TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits. In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST).
Probab=35.07 E-value=53 Score=33.51 Aligned_cols=65 Identities=18% Similarity=0.081 Sum_probs=40.9
Q ss_pred eeecCCCCceeeeeEEEeccCccccChHHHHHHHH---HHHHHHcCCcEEEEE----ecc-ccHHHHhhcccCcE
Q 048173 71 YQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKL---RKRLQSVGIRTIFCW----DDK-ESSFFFLKQVQDFA 137 (359)
Q Consensus 71 l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l---~~~lk~~GI~~I~l~----a~~-~A~~Fw~K~~~GF~ 137 (359)
|++...-+...||.-++++|+||+-|.|+.|-+.= +..-++.=-.+|+.. .++ .-.|||+.. |-.
T Consensus 108 L~l~nd~tG~sElctLfL~p~~R~~~~G~LLSr~RfLFiA~~~erF~~~viAEmrG~~De~G~SPFWd~l--g~h 180 (335)
T TIGR03243 108 LTLSNDLTGSSELCTLFLDPDYRKGGNGRLLSRSRFLFIAAFRERFGDKIIAEMRGVSDEQGRSPFWEAL--GRH 180 (335)
T ss_pred EEeeccCCCCeeeEEEEECHHHcCCCchhhHHHHHHHHHHhhHhhhhhhheeeccCccCCCCCCccHHHh--hcc
Confidence 34444444668999999999999999999886542 222222222334332 222 367899998 643
No 141
>PTZ00064 histone acetyltransferase; Provisional
Probab=34.99 E-value=27 Score=37.57 Aligned_cols=32 Identities=28% Similarity=0.229 Sum_probs=29.0
Q ss_pred eeEEEeccCccccChHHHHHHHHHHHHHHcCC
Q 048173 83 VPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGI 114 (359)
Q Consensus 83 I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI 114 (359)
+-++.|-|-||++|.|+.|+.---+..+..|.
T Consensus 387 LACILtLPpyQRKGYGklLIdfSYeLSrrEgk 418 (552)
T PTZ00064 387 LACILTLPCYQRKGYGKLLVDLSYKLSLKEGK 418 (552)
T ss_pred eEEEEecchhhhcchhhhhhhhhhhhhhhcCC
Confidence 78899999999999999999998888888774
No 142
>TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit. In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit.
Probab=34.48 E-value=56 Score=33.38 Aligned_cols=62 Identities=13% Similarity=-0.061 Sum_probs=39.3
Q ss_pred eeecCCCCceeeeeEEEeccCccccChHHHHHHHH---HHHHHHcCCcEEEEE----ecc-ccHHHHhhc
Q 048173 71 YQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKL---RKRLQSVGIRTIFCW----DDK-ESSFFFLKQ 132 (359)
Q Consensus 71 l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l---~~~lk~~GI~~I~l~----a~~-~A~~Fw~K~ 132 (359)
|++...-+...||.-++++|+||+-|.|++|-+.= +..-++.=-.+|+.. .++ .-.|||+-.
T Consensus 109 L~l~nd~tG~sElctLfL~p~~R~~~~G~lLSr~RfLFiA~~~erF~~~viAEmrG~~De~G~SPFWd~l 178 (336)
T TIGR03245 109 LYMCHELTGSSLLCSFYVDPRLRKTEAAELLSRARLLFMAAHRERFQSRIIVEIQGVQDDNGDSPFWDAI 178 (336)
T ss_pred EEeeccCCCCeeeEEEEECHHHcCCCchhHHHHHHHHHHHhhHhhhhhhheeeccCccCCCCCCccHHHh
Confidence 33444444668999999999999999999886542 122222222334332 222 367899998
No 143
>PRK10456 arginine succinyltransferase; Provisional
Probab=32.47 E-value=56 Score=33.48 Aligned_cols=62 Identities=15% Similarity=0.057 Sum_probs=39.1
Q ss_pred eeecCCCCceeeeeEEEeccCccccChHHHHHHHH---HHHHHHcCCcEEEEE----ecc-ccHHHHhhc
Q 048173 71 YQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKL---RKRLQSVGIRTIFCW----DDK-ESSFFFLKQ 132 (359)
Q Consensus 71 l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l---~~~lk~~GI~~I~l~----a~~-~A~~Fw~K~ 132 (359)
|++...-+...||.-++++|+||+-|.|++|-+.= +..-++.=-.+|+.. .+. ...|||+..
T Consensus 110 L~l~nd~tG~sElctLfl~p~~R~~~~G~LLSr~RfLFiA~~~erF~~~viAEmRG~~De~G~SPFWd~l 179 (344)
T PRK10456 110 LFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSRFMFMAAFRDKFNDKVVAEMRGVIDEHGYSPFWQSL 179 (344)
T ss_pred EEeeccCCCCceeEEEEECHHHcCCCchhHHHHHHHHHHHhhHhhhhhhhheeccCccCCCCCCccHHHh
Confidence 34444444668999999999999999999886542 122222222233332 222 467899998
No 144
>PHA02769 hypothetical protein; Provisional
Probab=32.35 E-value=39 Score=29.98 Aligned_cols=79 Identities=16% Similarity=0.144 Sum_probs=49.8
Q ss_pred CCCcEEEEEEeeecCCCCceeeeeEEEeccCcc-----ccChHHHHH---HHHHHHHHHcCCcEEEEEeccc-cHHHHhh
Q 048173 61 NLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQ-----HKGVGRLLY---LKLRKRLQSVGIRTIFCWDDKE-SSFFFLK 131 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~Q-----gkGIG~~Lv---~~l~~~lk~~GI~~I~l~a~~~-A~~Fw~K 131 (359)
+.|-++|+.-||.+-+-.=.|+=.-+-.|.+|= ..--|--|+ ..|.+.+++-|+..++..++.. |...|.|
T Consensus 52 ~~~y~~avawlhd~~pfr~ia~~~~ip~drs~firritk~apgd~lvnfl~~l~~k~~~dg~evlwtlgfpdhsnaly~k 131 (154)
T PHA02769 52 DKEYIVAVAWLHDNTPFRFIAQQYNIPNDRSYFIRRITKTAPGDHLVNFLNDLAEKLKKDGFEVLWTLGFPDHSNALYKK 131 (154)
T ss_pred CcceEEEEEeeccCCchhhHHHHhCCCcchHHHHHHHhccCChHHHHHHHHHHHHHHhcCCeEEEEEecCCCcchhHHhh
Confidence 445599999988876621111101111111110 112244454 4566778889999999999986 9999999
Q ss_pred cccCcEEEEe
Q 048173 132 QVQDFASVAE 141 (359)
Q Consensus 132 ~~~GF~~~~e 141 (359)
. ||..++.
T Consensus 132 a--gfk~vg~ 139 (154)
T PHA02769 132 A--GFKLVGQ 139 (154)
T ss_pred h--hhhHhcc
Confidence 9 9998885
No 145
>TIGR03244 arg_catab_AstA arginine N-succinyltransferase. In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST).
Probab=32.26 E-value=45 Score=34.03 Aligned_cols=65 Identities=20% Similarity=0.161 Sum_probs=40.1
Q ss_pred eeecCCCCceeeeeEEEeccCccccChHHHHHHHHH---HHHHHcCCcEEEE----Eecc-ccHHHHhhcccCcE
Q 048173 71 YQIVPADTQYAEVPLAAVSSIYQHKGVGRLLYLKLR---KRLQSVGIRTIFC----WDDK-ESSFFFLKQVQDFA 137 (359)
Q Consensus 71 l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~---~~lk~~GI~~I~l----~a~~-~A~~Fw~K~~~GF~ 137 (359)
|++...-+...||.-++++|+||+-|.|+.|-+.=. ..-++.=-.+|+. +.++ .-.|||+.. |-.
T Consensus 108 L~l~nd~tG~SElctLfL~p~~R~~~~G~LLSr~RfLFiA~~~erF~~~viAEmrG~~De~G~SPFWd~l--g~h 180 (336)
T TIGR03244 108 LFLSNDLTGYSELCTLFLDPDYRKGGNGRLLSKSRFLFIAQFRERFSKKIIAEMRGVSDEQGRSPFWNAL--GRH 180 (336)
T ss_pred EEeeccCCCCeeeEEEEECHHHcCCcchhhHHHHHHHHHHhhHhhhhhhhhhhhcCccCCCCCCchHHHh--hcc
Confidence 344444446689999999999999999998865421 1112221223322 2232 367899998 643
No 146
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=30.71 E-value=62 Score=33.65 Aligned_cols=53 Identities=25% Similarity=0.365 Sum_probs=42.9
Q ss_pred CCCcEEEEEEeeecCC-----CC--ceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCc
Q 048173 61 NLGKVVAAVIYQIVPA-----DT--QYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIR 115 (359)
Q Consensus 61 ~~g~IVgvi~l~i~~~-----d~--~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~ 115 (359)
..+++||-|.. .|. |+ ..++|-+++||..-|+|++.-.|+.|+-.+..-.||=
T Consensus 143 ~s~kLVaFIsa--iP~~irvrdk~vk~veINFLCVHKkLRSKRlaPvLIrEITRRvnl~gIf 202 (421)
T KOG2779|consen 143 SSKKLVAFISA--IPATIRVRDKVVKMVEINFLCVHKKLRSKRLAPVLIREITRRVNLEGIF 202 (421)
T ss_pred cCCceEEEEec--cccEEEEccceeeeeeEEEEEEehhhhccccccHHHHHHHHHhhhhhhh
Confidence 45678887763 222 32 5789999999999999999999999999999888873
No 147
>COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism]
Probab=29.59 E-value=79 Score=33.23 Aligned_cols=48 Identities=17% Similarity=0.176 Sum_probs=34.1
Q ss_pred CCcEEEEEEeeecCC-CCceeeeeEEEeccCccc-cChHHHHHHHHHHHH
Q 048173 62 LGKVVAAVIYQIVPA-DTQYAEVPLAAVSSIYQH-KGVGRLLYLKLRKRL 109 (359)
Q Consensus 62 ~g~IVgvi~l~i~~~-d~~~a~I~~~AV~~~~Qg-kGIG~~Lv~~l~~~l 109 (359)
.|.--|++.+-..+. ++..-|+.-|||.++.|| .|||..+.+-..+..
T Consensus 381 sgdY~g~aIlTyegs~~~~vpYLDKfAVl~~aQGs~gisd~vfniM~e~f 430 (495)
T COG5630 381 SGDYRGAAILTYEGSGENNVPYLDKFAVLDDAQGSEGISDAVFNIMREEF 430 (495)
T ss_pred eccceeeEEEEeeccCCCCCcceeeeeccccccccchHHHHHHHHHHHhC
Confidence 344444444333333 457889999999999999 999999988766543
No 148
>PLN00104 MYST -like histone acetyltransferase; Provisional
Probab=26.79 E-value=29 Score=36.66 Aligned_cols=32 Identities=22% Similarity=0.221 Sum_probs=28.3
Q ss_pred eeEEEeccCccccChHHHHHHHHHHHHHHcCC
Q 048173 83 VPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGI 114 (359)
Q Consensus 83 I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI 114 (359)
+-++.|-|-||++|.|+.|+.---+..+..|.
T Consensus 309 LaCIltlP~yQrkGyG~~LI~~SYeLSr~eg~ 340 (450)
T PLN00104 309 LACILTLPPYQRKGYGKFLIAFSYELSKREGK 340 (450)
T ss_pred eEEEEecchhhhcchhheehhheehhhhccCC
Confidence 78899999999999999999988877777763
No 149
>cd04263 DUF619-NAGK-FABP DUF619 domain of N-acetylglutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway. DUF619-NAGK-FABP: DUF619 domain of N-acetylglutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (FABP). The nuclear-encoded, mitochondrial polyprotein precursor (ARG5,6) consists of an N-terminal NAGK (ArgB) domain, a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved into two distinct enzymes (NAGK-DUF619 and NAGPR) in the mitochondria. Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. Arg5,6 catalyzes the second reaction of arginine biosynthesis; the phosphorylation of the gamma-carboxyl group of NAG to produce N-acetylglutamylphosphate (NAGP) which is subsequently converted to ornithine in two more steps. It also binds and regulates the promoters of nuclear and mitochondrial genes, and may possibly regu
Probab=25.47 E-value=1.8e+02 Score=24.63 Aligned_cols=31 Identities=10% Similarity=0.127 Sum_probs=28.0
Q ss_pred CceeeeeEEEeccCccccChHHHHHHHHHHH
Q 048173 78 TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKR 108 (359)
Q Consensus 78 ~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~ 108 (359)
+..+++.-|+|..+-++.|++..+.+++.+.
T Consensus 31 ~~vp~LdkF~vs~~~~l~~vaD~Vf~~i~~d 61 (98)
T cd04263 31 GEVATLATFTITKSGWLNNVADNIFTAIKKD 61 (98)
T ss_pred CCCEEEEEEEEccccccccHHHHHHHHHHhh
Confidence 5679999999999999999999999988766
No 150
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=25.19 E-value=1e+02 Score=29.95 Aligned_cols=36 Identities=17% Similarity=0.171 Sum_probs=28.6
Q ss_pred HHHHHHHHcCCcEEEEEecc------ccHHHHhhcccCcEEEEe
Q 048173 104 KLRKRLQSVGIRTIFCWDDK------ESSFFFLKQVQDFASVAE 141 (359)
Q Consensus 104 ~l~~~lk~~GI~~I~l~a~~------~A~~Fw~K~~~GF~~~~e 141 (359)
++.+.|+.+|+++|.+.+-. --..||+++ ||+++.-
T Consensus 108 Avv~aL~al~a~ri~vlTPY~~evn~~e~ef~~~~--Gfeiv~~ 149 (238)
T COG3473 108 AVVEALNALGAQRISVLTPYIDEVNQREIEFLEAN--GFEIVDF 149 (238)
T ss_pred HHHHHHHhhCcceEEEeccchhhhhhHHHHHHHhC--CeEEEEe
Confidence 34567899999999887754 257899999 9998764
No 151
>PRK14852 hypothetical protein; Provisional
Probab=23.83 E-value=1.8e+02 Score=33.94 Aligned_cols=68 Identities=13% Similarity=0.033 Sum_probs=54.7
Q ss_pred CceeeeeEEEeccCccccChHHHHHHHHHHHHHHcCCcEEEEEeccccHHHHhhcccCcEEEEeecccC
Q 048173 78 TQYAEVPLAAVSSIYQHKGVGRLLYLKLRKRLQSVGIRTIFCWDDKESSFFFLKQVQDFASVAEVDTEG 146 (359)
Q Consensus 78 ~~~a~I~~~AV~~~~QgkGIG~~Lv~~l~~~lk~~GI~~I~l~a~~~A~~Fw~K~~~GF~~~~e~~~~g 146 (359)
...+++-.||+|++.+.+=+=-.+++.+.+++...++.-++.-++..=.+||++. =||+.++++...+
T Consensus 119 r~v~EvtrLa~d~~~~~~~l~~~l~~~~~~y~~~~~~dd~~i~VnPkH~~FY~r~-l~f~~ig~~r~~p 186 (989)
T PRK14852 119 RNVVEVGALATQYSRRWTNLMVFLAKAMFQYSMMSEVDDILVTVNPKHVKFYTDI-FLFKPFGEVRHYD 186 (989)
T ss_pred CeEEeeehheechhhcccchhHHHHHHHHHHHHHcCCCeEEEEECcchHHHHHHH-hCCccccccccCC
Confidence 3788999999988777765555677777777788899999999999989999965 3999998765533
No 152
>COG2898 Uncharacterized conserved protein [Function unknown]
Probab=21.06 E-value=3.5e+02 Score=29.53 Aligned_cols=82 Identities=21% Similarity=0.158 Sum_probs=61.9
Q ss_pred chhhhccCCccchhhhhhccCccccccccccceeeccCCCCcEEEEEEeeecCCCCceeeeeEEEeccCccccChHHHHH
Q 048173 23 PEKCVLNGILPNELYQLYMGSIHPLINLCSMYKVVSFLNLGKVVAAVIYQIVPADTQYAEVPLAAVSSIYQHKGVGRLLY 102 (359)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~IVgvi~l~i~~~d~~~a~I~~~AV~~~~QgkGIG~~Lv 102 (359)
-|+|-+.| +..+-|.. +......-.+|+|||-.-+...+.++++- |..|=-+|+.=. |+=-.|+
T Consensus 376 rEkgFsLG-~fdp~yl~-------------~~~va~~~~~g~VvaFa~l~~~~~~~~~S-lDlMR~sp~ap~-g~mdfLf 439 (538)
T COG2898 376 REKGFSLG-FFDPRYLD-------------IFPVAAVDNEGEVVAFANLMPTGGKEGYS-LDLMRRSPDAPN-GTMDFLF 439 (538)
T ss_pred ccceeecc-CCCccccc-------------cceeeEEcCCCCeEEEEeecccCCcceeE-EEeeecCCCCCc-hHHHHHH
Confidence 36677777 55533321 13444556788899999977766666666 999999999865 9999999
Q ss_pred HHHHHHHHHcCCcEEEEE
Q 048173 103 LKLRKRLQSVGIRTIFCW 120 (359)
Q Consensus 103 ~~l~~~lk~~GI~~I~l~ 120 (359)
.++...+|+.|++++-+.
T Consensus 440 ~~li~~aKe~G~~~fsLg 457 (538)
T COG2898 440 SELILWAKEEGYQRFSLG 457 (538)
T ss_pred HHHHHHHHHcCCeEEecC
Confidence 999999999999998543
No 153
>PF09078 CheY-binding: CheY binding; InterPro: IPR015162 The CheY binding domain is found in the response regulator histidine kinase CheA. It adopts a secondary structure consisting of an open-face beta/alpha sandwich, with four antiparallel beta-strands and two alpha-helices. It binds to a corresponding domain on CheY, with subsequent phosphorylation of the CheY Asp57 residue, and activation of CheY, which then affects flagellar rotation []. ; PDB: 1FWP_A 1EAY_C 1A0O_D 1FFG_B 1FFS_B 1FFW_D.
Probab=20.76 E-value=1.2e+02 Score=24.10 Aligned_cols=56 Identities=20% Similarity=0.266 Sum_probs=26.8
Q ss_pred eEEEEcccCcchHHHHHHHhcC--cEEecC-CCCeeEEEeCCCCCcHHHHhhcc-cccCHH
Q 048173 253 FRITLMNIADDSKKVHLTKNLR--GAVTSD-GITSTHVVAGKVRKTLNFFTALS-WIVSPS 309 (359)
Q Consensus 253 prI~fSgl~~e~kk~klik~LG--G~V~~d-~~~~THLVa~~~~RT~KfL~AIa-wIVsp~ 309 (359)
.||.++++++. ...-+.+.|| |.|... ...-++.+.=.-.-+.-=..|++ +||.|+
T Consensus 1 lrI~L~~l~~k-d~~lL~eELgnLG~v~~~~~~~~~l~~~L~T~~s~DDI~AV~CFVid~d 60 (65)
T PF09078_consen 1 LRITLSGLKEK-DVDLLLEELGNLGTVSDQEKGGDSLEVWLETSVSADDIIAVCCFVIDPD 60 (65)
T ss_dssp -EEEEES--TT-HHHHHHHHHHHHS--EEEEEESSEEEEEE-STSSHHHHHHHHTTTS-GG
T ss_pred CeEEecCCCHH-HHHHHHHHHhcCccEEEEecCCCeEEEEECCCCChhhEEEEEEEEEcHH
Confidence 47889999884 3334555555 555544 22223333333344555566766 777765
No 154
>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.
Probab=20.40 E-value=69 Score=26.43 Aligned_cols=28 Identities=11% Similarity=0.084 Sum_probs=21.3
Q ss_pred CCcEEEEEecc--ccHHHHhhcccCcEEEEee
Q 048173 113 GIRTIFCWDDK--ESSFFFLKQVQDFASVAEV 142 (359)
Q Consensus 113 GI~~I~l~a~~--~A~~Fw~K~~~GF~~~~e~ 142 (359)
++.+|.+.+.. .|..||.++ ||+...+.
T Consensus 3 ~i~Hi~i~v~Dl~~s~~FY~~L--G~~~~~~~ 32 (142)
T cd08353 3 RMDNVGIVVRDLEAAIAFFLEL--GLELEGRA 32 (142)
T ss_pred eeeeEEEEeCCHHHHHHHHHHc--CCEEcccc
Confidence 56677666665 599999998 99987653
Done!