BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048174
(1303 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|M Chain M, 3-D Structure Of Myosin-V Inhibited State
Length = 1080
Score = 595 bits (1534), Expect = e-170, Method: Compositional matrix adjust.
Identities = 346/866 (39%), Positives = 490/866 (56%), Gaps = 46/866 (5%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRY-EINEIYTYTGNILIALNPFQPLSHLYDAYMMERYK 65
G +D+T LSYLHEP VLHNL R+ + IYTY G +L+A+NP++ L +Y ++ Y
Sbjct: 70 GENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP-IYGEDIINAYS 128
Query: 66 GVPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTA 125
G G + PH+FA+A+ AY++M + ++ SI+VSGESGAGKT + K MRY A + G +A
Sbjct: 129 GQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSG-SA 187
Query: 126 AEGRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
+E +VE++VL SNP++E+ GNAKT +N+NSSRFGK++EI FDKR RI GA +RTYLLE+
Sbjct: 188 SEA-NVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEK 246
Query: 186 SRVCKISDPERNYHCFYLLCA-APPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV ++ ERNYH FY LCA A E + +LGN FHY Q + G++DA + +
Sbjct: 247 SRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEMV 306
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+A ++GIS Q IF ++A ILHLGN+EF + DS + L + L+
Sbjct: 307 NTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKHDP--LTIFCDLM 364
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
D E+ LC R + T E K + + A +RD LAK IY+ LF+W+VD +N ++
Sbjct: 365 GVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALH 424
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
IGVLDIYG QFCIN+ NEKLQQ FN +VFK+EQ +Y E+I W
Sbjct: 425 STVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPW 484
Query: 425 SYVHFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLYQTFKDH-KRFIKPKL 483
+ + F DNQ ++LIE K G++ LLDE C PK + + ++QKLY T + F KP+L
Sbjct: 485 TLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRL 543
Query: 484 TRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASE------------------- 524
+ F I H+A +V YQ + FL+KNKD V E +L +S+
Sbjct: 544 SNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPT 603
Query: 525 CSFVSGLFP-------PXXXX--XXXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVK 575
+ SG P P G +F+ L LM+TLN+T PHY+RC+K
Sbjct: 604 SATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIK 663
Query: 576 PNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNY 635
PN+ P D +QQLR+ GVLE IR+ AG+P+R T+ EF R+ +L+ + +
Sbjct: 664 PNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQ-KDVLS 722
Query: 636 DEKIACKWILEK--MDLKGYQIGKTKVFLKAGQMAELDAKRAKLLGHSAEVIQSQHRRRV 693
D K CK +LEK +D YQ GKTK+F +AGQ+A L+ RA L + IQ R +
Sbjct: 723 DRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWL 782
Query: 694 TQKHYITLVQAAVCIQSSCRGILARRYCXXXXXXXXXXXIQKNSRTMMTRKAYSNVKAAA 753
+K Y+ + +AA+ IQ RG AR Y IQK R + RK Y ++ A
Sbjct: 783 MRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDAT 842
Query: 754 IVXXXXXXXXXXXXXXXXXSELRHRKHAKGALSIQTSWRGHRDFSYYKRLRKASVFSQSR 813
I ++ R+H ++ IQ RG +Y R KA V+ Q
Sbjct: 843 IALQALLRGYLVRNKY----QMMLREHK--SIIIQKHVRGWLARVHYHRTLKAIVYLQCC 896
Query: 814 WRGIAARREFRKLKMTAKKEERGQEI 839
+R + A+RE +KLK+ A+ ER +++
Sbjct: 897 YRRMMAKRELKKLKIEARSVERYKKL 922
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Alf4
Length = 770
Score = 573 bits (1476), Expect = e-163, Method: Compositional matrix adjust.
Identities = 291/677 (42%), Positives = 443/677 (65%), Gaps = 14/677 (2%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKG 66
G +DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ + +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 67 VPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA 126
+++PH+FAI+D AYR M+++ ++ S+L++GESGAGKTE TK +++YLA + G A
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 127 EGRSV-EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
G V EQQ+L++NP+LEAFGNAKT +NNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 265
Query: 186 SRVCKISDPERNYHCFY-LLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV S+ ERNYH FY LL A +E + L P SF+YLNQS C ++ GV+D+ ++
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+AMD++G S++EQ +IF ++A ILHLGNI+FEKG + +V+KD K L + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKD---KTALNAASTVF 382
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
+P LE AL + ++ +++ + L+ ++ SRD L K +Y RLF WLV KIN +
Sbjct: 383 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC 442
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
Q+ IGVLDIYG Q CIN+TNEKLQQ FN ++FK+EQ +Y E+I+W
Sbjct: 443 QE-RKAYFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINW 501
Query: 425 SYVHF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKP 481
+++ F +D+Q +DLI+ ++P GI+ALLDE +FP +T KL+ F K + ++ +P
Sbjct: 502 TFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEP 561
Query: 482 KLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF--PPXXXXX 539
+ ++++F + HYAG+V Y+ +L+KNKD + + + S + V+ LF P
Sbjct: 562 RFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 621
Query: 540 XXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGV 599
+++K QL LM TL +T PH++RC+ PNN+ P L+ V+ QLR GV
Sbjct: 622 KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGV 681
Query: 600 LEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWILEKMDL--KGYQIGK 657
LE IR+ G+P R +++F+ R+ +L P + + D + A +L+ +++ + Y+ G
Sbjct: 682 LEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGI 741
Query: 658 TKVFLKAGQMAELDAKR 674
TK+F +AGQ+A ++ R
Sbjct: 742 TKIFFRAGQLARIEEAR 758
>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Befx
Length = 770
Score = 572 bits (1473), Expect = e-163, Method: Compositional matrix adjust.
Identities = 291/677 (42%), Positives = 442/677 (65%), Gaps = 14/677 (2%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKG 66
G +DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ + +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 67 VPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA 126
+++PH+FAI+D AYR M+++ ++ S+L++GESGAGKTE TK +++YLA + G A
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 127 EGRSV-EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
G V EQQ+L++NP+LEAFGNAKT +NNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 265
Query: 186 SRVCKISDPERNYHCFY-LLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV S+ ERNYH FY LL A +E + L P SF+YLNQS C ++ GV+D+ ++
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+AMD++G S++EQ +IF ++A ILHLGNI+FEKG + +V+KD K L + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKD---KTALNAASTVF 382
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
+P LE AL + ++ +++ + L+ ++ SRD L K +Y RLF WLV KIN +
Sbjct: 383 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC 442
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
Q+ IGVLDIYG Q CIN+TNEKLQQ FN ++FK+EQ +Y E+I+W
Sbjct: 443 QE-RKAYFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINW 501
Query: 425 SYVHF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKP 481
+++ F +D+Q +DLI+ ++P GI+ALLDE +FP +T KL+ F K + ++ +P
Sbjct: 502 TFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEP 561
Query: 482 KLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF--PPXXXXX 539
+ ++++F + HYAG+V Y+ +L+KNKD + + + S + V+ LF P
Sbjct: 562 RFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 621
Query: 540 XXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGV 599
+++K QL LM TL +T PH++RC+ PNN+ P L+ V+ QLR GV
Sbjct: 622 KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGV 681
Query: 600 LEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWILEKM--DLKGYQIGK 657
LE IR+ G+P R +++F+ R+ +L P + + D + A +L+ + D + ++ G
Sbjct: 682 LEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGI 741
Query: 658 TKVFLKAGQMAELDAKR 674
TK+F +AGQ+A ++ R
Sbjct: 742 TKIFFRAGQLARIEEAR 758
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor
pdb|1G8X|B Chain B, Structure Of A Genetically Engineered Molecular Motor
Length = 1010
Score = 572 bits (1473), Expect = e-163, Method: Compositional matrix adjust.
Identities = 293/698 (41%), Positives = 451/698 (64%), Gaps = 16/698 (2%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKG 66
G +DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ + +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 67 VPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA 126
+++PH+FAI+D AYR M+++ ++ S+L++GESGAGKTE TK +++YLA + G A
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 127 EGRSV-EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
G V EQQ+L++NP+LEAFGNAKT +NNNSS FGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSEFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 186 SRVCKISDPERNYHCFY-LLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV S+ ERNYH FY LL A +E + L P SF+YLNQS C ++ GV+D +++
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFK 325
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+AMD++G S++EQ +IF ++A ILHLGNI+FEKG + +V+KD K L + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKD---KTALNAASTVF 382
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
+P LE AL + ++ +++ + L+ ++ SRD L K +Y RLF WLV KIN +
Sbjct: 383 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC 442
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
+ IGVLDI G Q CIN+TNEKLQQ FN ++FK+EQ +Y E+I+W
Sbjct: 443 SE-RKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINW 501
Query: 425 SYVHF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKP 481
+++ F +D+Q +DLI+ ++P GI+ALLDE +FP +T KL+ F K + ++ +P
Sbjct: 502 TFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEP 561
Query: 482 KLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF--PPXXXXX 539
+ ++++F + HYAG+V Y+ +L+KNKD + + + S + V+ LF P
Sbjct: 562 RFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 621
Query: 540 XXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGV 599
+++K QL LM TL +T PH++RC+ PNN+ P L+ V+ QLR GV
Sbjct: 622 KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGV 681
Query: 600 LEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWILEKMDL--KGYQIGK 657
LE IR+ G+P R +++F+ R+ +L P + + D + A +L+ +++ + Y+ G
Sbjct: 682 LEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGI 741
Query: 658 TKVFLKAGQMAELDAKRAKLLGHSAEVIQSQHRRRVTQ 695
TK+F +AGQ+A ++ R + LG +E +S + +R +
Sbjct: 742 TKIFFRAGQLARIEEAREQRLG--SEQTKSDYLKRANE 777
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain
From Dictyostelium Discoideum Fused To The Gtpase Domain
Of Dynamin 1 From Rattus Norvegicus
Length = 776
Score = 570 bits (1469), Expect = e-162, Method: Compositional matrix adjust.
Identities = 290/677 (42%), Positives = 442/677 (65%), Gaps = 14/677 (2%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKG 66
G +DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ + +Y M++ +KG
Sbjct: 98 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 156
Query: 67 VPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA 126
+++PH+FAI+D AYR M+++ ++ S+L++GESGAGKTE TK +++YLA + G A
Sbjct: 157 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 216
Query: 127 EGRSV-EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
G V EQQ+L++NP+LEAFGNAKT +NNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 217 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 276
Query: 186 SRVCKISDPERNYHCFY-LLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV S+ ERNYH FY LL A +E + L P SF+YLNQS C ++ GV+D+ ++
Sbjct: 277 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 336
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+AMD++G S++EQ +IF ++A ILHLGNI+FEKG + +V+KD K L + +
Sbjct: 337 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKD---KTALNAASTVF 393
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
+P LE AL + ++ +++ + L+ ++ SRD L K +Y RLF WLV KIN +
Sbjct: 394 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC 453
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
Q+ IGVLDI G Q CIN+TNEKLQQ FN ++FK+EQ +Y E+I+W
Sbjct: 454 QE-RKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINW 512
Query: 425 SYVHF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKP 481
+++ F +D+Q +DLI+ ++P GI+ALLDE +FP +T KL+ F K + ++ +P
Sbjct: 513 TFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEP 572
Query: 482 KLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF--PPXXXXX 539
+ ++++F + HYAG+V Y+ +L+KNKD + + + S + V+ LF P
Sbjct: 573 RFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 632
Query: 540 XXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGV 599
+++K QL LM TL +T PH++RC+ PNN+ P L+ V+ QLR GV
Sbjct: 633 KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGV 692
Query: 600 LEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWILEKMDL--KGYQIGK 657
LE IR+ G+P R +++F+ R+ +L P + + D + A +L+ +++ + Y+ G
Sbjct: 693 LEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGI 752
Query: 658 TKVFLKAGQMAELDAKR 674
TK+F +AGQ+A ++ R
Sbjct: 753 TKIFFRAGQLARIEEAR 769
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed
With Gdp, Determined As Myosin Fusion
pdb|1JX2|A Chain A, Crystal Structure Of The Nucleotide-Free Dynamin A Gtpase
Domain, Determined As Myosin Fusion
Length = 776
Score = 570 bits (1469), Expect = e-162, Method: Compositional matrix adjust.
Identities = 290/677 (42%), Positives = 442/677 (65%), Gaps = 14/677 (2%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKG 66
G +DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ + +Y M++ +KG
Sbjct: 98 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 156
Query: 67 VPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA 126
+++PH+FAI+D AYR M+++ ++ S+L++GESGAGKTE TK +++YLA + G A
Sbjct: 157 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 216
Query: 127 EGRSV-EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
G V EQQ+L++NP+LEAFGNAKT +NNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 217 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 276
Query: 186 SRVCKISDPERNYHCFY-LLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV S+ ERNYH FY LL A +E + L P SF+YLNQS C ++ GV+D+ ++
Sbjct: 277 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 336
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+AMD++G S++EQ +IF ++A ILHLGNI+FEKG + +V+KD K L + +
Sbjct: 337 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKD---KTALNAASTVF 393
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
+P LE AL + ++ +++ + L+ ++ SRD L K +Y RLF WLV KIN +
Sbjct: 394 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC 453
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
Q+ IGVLDI G Q CIN+TNEKLQQ FN ++FK+EQ +Y E+I+W
Sbjct: 454 QE-RKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINW 512
Query: 425 SYVHF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKP 481
+++ F +D+Q +DLI+ ++P GI+ALLDE +FP +T KL+ F K + ++ +P
Sbjct: 513 TFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEP 572
Query: 482 KLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF--PPXXXXX 539
+ ++++F + HYAG+V Y+ +L+KNKD + + + S + V+ LF P
Sbjct: 573 RFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 632
Query: 540 XXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGV 599
+++K QL LM TL +T PH++RC+ PNN+ P L+ V+ QLR GV
Sbjct: 633 KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGV 692
Query: 600 LEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWILEKMDL--KGYQIGK 657
LE IR+ G+P R +++F+ R+ +L P + + D + A +L+ +++ + Y+ G
Sbjct: 693 LEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGI 752
Query: 658 TKVFLKAGQMAELDAKR 674
TK+F +AGQ+A ++ R
Sbjct: 753 TKIFFRAGQLARIEEAR 769
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With M-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D0Y|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O-Nitrophenyl Aminoethyldiphosphate
Beryllium Fluoride.
pdb|1D0Z|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With P-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1A|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1B|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminopropyldiphosphate
Beryllium Trifluoride.
pdb|1D1C|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With N-Methyl-O-Nitrophenyl
Aminoethyldiphosphate Beryllium Trifluoride
Length = 761
Score = 570 bits (1468), Expect = e-162, Method: Compositional matrix adjust.
Identities = 290/677 (42%), Positives = 442/677 (65%), Gaps = 14/677 (2%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKG 66
G +DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ + +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 67 VPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA 126
+++PH+FAI+D AYR M+++ ++ S+L++GESGAGKTE TK +++YLA + G A
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 127 EGRSV-EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
G V EQQ+L++NP+LEAFGNAKT +NNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 186 SRVCKISDPERNYHCFY-LLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV S+ ERNYH FY LL A +E + L P SF+YLNQS C ++ GV+D+ ++
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+AMD++G S++EQ +IF ++A ILHLGNI+FEKG + +V+KD K L + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKD---KTALNAASTVF 382
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
+P LE AL + ++ +++ + L+ ++ SRD L K +Y RLF WLV KIN +
Sbjct: 383 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC 442
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
Q+ IGVLDI G Q CIN+TNEKLQQ FN ++FK+EQ +Y E+I+W
Sbjct: 443 QE-RKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINW 501
Query: 425 SYVHF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKP 481
+++ F +D+Q +DLI+ ++P GI+ALLDE +FP +T KL+ F K + ++ +P
Sbjct: 502 TFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEP 561
Query: 482 KLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF--PPXXXXX 539
+ ++++F + HYAG+V Y+ +L+KNKD + + + S + V+ LF P
Sbjct: 562 RFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 621
Query: 540 XXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGV 599
+++K QL LM TL +T PH++RC+ PNN+ P L+ V+ QLR GV
Sbjct: 622 KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGV 681
Query: 600 LEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWILEKMDL--KGYQIGK 657
LE IR+ G+P R +++F+ R+ +L P + + D + A +L+ +++ + Y+ G
Sbjct: 682 LEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGI 741
Query: 658 TKVFLKAGQMAELDAKR 674
TK+F +AGQ+A ++ R
Sbjct: 742 TKIFFRAGQLARIEEAR 758
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated
Inhibition Of Myosin Motor Activity
pdb|4AE3|A Chain A, Crystal Structure Of Ammosamide 272:myosin-2 Motor Domain
Complex
Length = 776
Score = 570 bits (1468), Expect = e-162, Method: Compositional matrix adjust.
Identities = 292/681 (42%), Positives = 443/681 (65%), Gaps = 14/681 (2%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKG 66
G +DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ + +Y M++ +KG
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 144
Query: 67 VPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA 126
+++PH+FAI+D AYR M+++ ++ S+L++GESGAGKTE TK +++YLA + G A
Sbjct: 145 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 204
Query: 127 EGRSV-EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
G V EQQ+L++NP+LEAFGNAKT +NNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 205 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 264
Query: 186 SRVCKISDPERNYHCFY-LLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV S+ ERNYH FY LL A +E + L P SF+YLNQS C ++ GV+D+ ++
Sbjct: 265 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 324
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+AMD++G S++EQ +IF ++A ILHLGNI+FEKG + +V+KD K L + +
Sbjct: 325 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKD---KTALNAASTVF 381
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
+P LE AL + ++ +++ + L+ ++ SRD L K +Y RLF WLV KIN +
Sbjct: 382 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC 441
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
Q+ IGVLDI G Q CIN+TNEKLQQ FN ++FK+EQ +Y E+I+W
Sbjct: 442 QE-RKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINW 500
Query: 425 SYVHF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKP 481
+++ F +D+Q +DLI+ ++P GI+ALLDE +FP +T KL+ F K + ++ +P
Sbjct: 501 TFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEP 560
Query: 482 KLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF--PPXXXXX 539
+ ++++F + HYAG+V Y+ +L+KNKD + + + S + V+ LF P
Sbjct: 561 RFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 620
Query: 540 XXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGV 599
+++K QL LM TL +T PH++RC+ PNN+ P L+ V+ QLR GV
Sbjct: 621 KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGV 680
Query: 600 LEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWILEKM--DLKGYQIGK 657
LE IR+ G+P R +++F+ R+ +L P + + D + A +L+ + D + Y+ G
Sbjct: 681 LEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGI 740
Query: 658 TKVFLKAGQMAELDAKRAKLL 678
TK+F +AGQ+A ++ R + L
Sbjct: 741 TKIFFRAGQLARIEEAREQRL 761
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And
Specificity For Myosin Ii
pdb|3BZ7|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ8|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ9|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
Length = 762
Score = 570 bits (1468), Expect = e-162, Method: Compositional matrix adjust.
Identities = 290/677 (42%), Positives = 442/677 (65%), Gaps = 14/677 (2%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKG 66
G +DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ + +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 67 VPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA 126
+++PH+FAI+D AYR M+++ ++ S+L++GESGAGKTE TK +++YLA + G A
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 127 EGRSV-EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
G V EQQ+L++NP+LEAFGNAKT +NNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 265
Query: 186 SRVCKISDPERNYHCFY-LLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV S+ ERNYH FY LL A +E + L P SF+YLNQS C ++ GV+D+ ++
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+AMD++G S++EQ +IF ++A ILHLGNI+FEKG + +V+KD K L + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKD---KTALNAASTVF 382
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
+P LE AL + ++ +++ + L+ ++ SRD L K +Y RLF WLV KIN +
Sbjct: 383 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC 442
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
Q+ IGVLDI G Q CIN+TNEKLQQ FN ++FK+EQ +Y E+I+W
Sbjct: 443 QE-RKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINW 501
Query: 425 SYVHF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKP 481
+++ F +D+Q +DLI+ ++P GI+ALLDE +FP +T KL+ F K + ++ +P
Sbjct: 502 TFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEP 561
Query: 482 KLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF--PPXXXXX 539
+ ++++F + HYAG+V Y+ +L+KNKD + + + S + V+ LF P
Sbjct: 562 RFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 621
Query: 540 XXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGV 599
+++K QL LM TL +T PH++RC+ PNN+ P L+ V+ QLR GV
Sbjct: 622 KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGV 681
Query: 600 LEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWILEKMDL--KGYQIGK 657
LE IR+ G+P R +++F+ R+ +L P + + D + A +L+ +++ + Y+ G
Sbjct: 682 LEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGI 741
Query: 658 TKVFLKAGQMAELDAKR 674
TK+F +AGQ+A ++ R
Sbjct: 742 TKIFFRAGQLARIEEAR 758
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of
Dictyostellium Myosin Ii
pdb|1FMW|A Chain A, Crystal Structure Of The Mgatp Complex For The Motor
Domain Of Dictyostelium Myosin Ii
Length = 761
Score = 569 bits (1467), Expect = e-162, Method: Compositional matrix adjust.
Identities = 290/677 (42%), Positives = 442/677 (65%), Gaps = 14/677 (2%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKG 66
G +DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ + +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 67 VPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA 126
+++PH+FAI+D AYR M+++ ++ S+L++GESGAGKTE TK +++YLA + G A
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 127 EGRSV-EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
G V EQQ+L++NP+LEAFGNAKT +NNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 186 SRVCKISDPERNYHCFY-LLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV S+ ERNYH FY LL A +E + L P SF+YLNQS C ++ GV+D+ ++
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+AMD++G S++EQ +IF ++A ILHLGNI+FEKG + +V+KD K L + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKD---KTALNAASTVF 382
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
+P LE AL + ++ +++ + L+ ++ SRD L K +Y RLF WLV KIN +
Sbjct: 383 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC 442
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
Q+ IGVLDI G Q CIN+TNEKLQQ FN ++FK+EQ +Y E+I+W
Sbjct: 443 QE-RKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINW 501
Query: 425 SYVHF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKP 481
+++ F +D+Q +DLI+ ++P GI+ALLDE +FP +T KL+ F K + ++ +P
Sbjct: 502 TFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEP 561
Query: 482 KLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF--PPXXXXX 539
+ ++++F + HYAG+V Y+ +L+KNKD + + + S + V+ LF P
Sbjct: 562 RFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 621
Query: 540 XXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGV 599
+++K QL LM TL +T PH++RC+ PNN+ P L+ V+ QLR GV
Sbjct: 622 KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGV 681
Query: 600 LEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWILEKMDL--KGYQIGK 657
LE IR+ G+P R +++F+ R+ +L P + + D + A +L+ +++ + Y+ G
Sbjct: 682 LEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGI 741
Query: 658 TKVFLKAGQMAELDAKR 674
TK+F +AGQ+A ++ R
Sbjct: 742 TKIFFRAGQLARIEEAR 758
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e
Bound With Mgadp-Alf4
Length = 770
Score = 569 bits (1467), Expect = e-162, Method: Compositional matrix adjust.
Identities = 290/677 (42%), Positives = 442/677 (65%), Gaps = 14/677 (2%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKG 66
G +DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ + +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 67 VPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA 126
+++PH+FAI+D AYR M+++ ++ S+L++GESGAGKTE TK +++YLA + G A
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 127 EGRSV-EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
G V EQQ+L++NP+LEAFGNAKT +NNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 265
Query: 186 SRVCKISDPERNYHCFY-LLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV S+ ERNYH FY LL A +E + L P SF+YLNQS C ++ GV+D+ ++
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+AMD++G S++EQ +IF ++A ILHLGNI+FEKG + +V+KD K L + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKD---KTALNAASTVF 382
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
+P LE AL + ++ +++ + L+ ++ SRD L K +Y RLF WLV KIN +
Sbjct: 383 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC 442
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
Q+ IGVLDI G Q CIN+TNEKLQQ FN ++FK+EQ +Y E+I+W
Sbjct: 443 QE-RKAYFIGVLDIEGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINW 501
Query: 425 SYVHF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKP 481
+++ F +D+Q +DLI+ ++P GI+ALLDE +FP +T KL+ F K + ++ +P
Sbjct: 502 TFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEP 561
Query: 482 KLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF--PPXXXXX 539
+ ++++F + HYAG+V Y+ +L+KNKD + + + S + V+ LF P
Sbjct: 562 RFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 621
Query: 540 XXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGV 599
+++K QL LM TL +T PH++RC+ PNN+ P L+ V+ QLR GV
Sbjct: 622 KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGV 681
Query: 600 LEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWILEKMDL--KGYQIGK 657
LE IR+ G+P R +++F+ R+ +L P + + D + A +L+ +++ + Y+ G
Sbjct: 682 LEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGI 741
Query: 658 TKVFLKAGQMAELDAKR 674
TK+F +AGQ+A ++ R
Sbjct: 742 TKIFFRAGQLARIEEAR 758
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentabromopseudilin
pdb|2JJ9|A Chain A, Crystal Structure Of Myosin-2 In Complex With Adp-
Metavanadate
pdb|3MJX|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Blebbistatin
Length = 788
Score = 569 bits (1467), Expect = e-162, Method: Compositional matrix adjust.
Identities = 292/681 (42%), Positives = 443/681 (65%), Gaps = 14/681 (2%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKG 66
G +DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ + +Y M++ +KG
Sbjct: 98 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 156
Query: 67 VPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA 126
+++PH+FAI+D AYR M+++ ++ S+L++GESGAGKTE TK +++YLA + G A
Sbjct: 157 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 216
Query: 127 EGRSV-EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
G V EQQ+L++NP+LEAFGNAKT +NNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 217 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 276
Query: 186 SRVCKISDPERNYHCFY-LLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV S+ ERNYH FY LL A +E + L P SF+YLNQS C ++ GV+D+ ++
Sbjct: 277 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 336
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+AMD++G S++EQ +IF ++A ILHLGNI+FEKG + +V+KD K L + +
Sbjct: 337 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKD---KTALNAASTVF 393
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
+P LE AL + ++ +++ + L+ ++ SRD L K +Y RLF WLV KIN +
Sbjct: 394 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC 453
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
Q+ IGVLDI G Q CIN+TNEKLQQ FN ++FK+EQ +Y E+I+W
Sbjct: 454 QE-RKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINW 512
Query: 425 SYVHF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKP 481
+++ F +D+Q +DLI+ ++P GI+ALLDE +FP +T KL+ F K + ++ +P
Sbjct: 513 TFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEP 572
Query: 482 KLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF--PPXXXXX 539
+ ++++F + HYAG+V Y+ +L+KNKD + + + S + V+ LF P
Sbjct: 573 RFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 632
Query: 540 XXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGV 599
+++K QL LM TL +T PH++RC+ PNN+ P L+ V+ QLR GV
Sbjct: 633 KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGV 692
Query: 600 LEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWILEKM--DLKGYQIGK 657
LE IR+ G+P R +++F+ R+ +L P + + D + A +L+ + D + Y+ G
Sbjct: 693 LEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGI 752
Query: 658 TKVFLKAGQMAELDAKRAKLL 678
TK+F +AGQ+A ++ R + L
Sbjct: 753 TKIFFRAGQLARIEEAREQRL 773
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Resveratrol
Length = 788
Score = 569 bits (1467), Expect = e-162, Method: Compositional matrix adjust.
Identities = 292/681 (42%), Positives = 443/681 (65%), Gaps = 14/681 (2%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKG 66
G +DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ + +Y M++ +KG
Sbjct: 98 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 156
Query: 67 VPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA 126
+++PH+FAI+D AYR M+++ ++ S+L++GESGAGKTE TK +++YLA + G A
Sbjct: 157 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 216
Query: 127 EGRSV-EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
G V EQQ+L++NP+LEAFGNAKT +NNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 217 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 276
Query: 186 SRVCKISDPERNYHCFY-LLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV S+ ERNYH FY LL A +E + L P SF+YLNQS C ++ GV+D+ ++
Sbjct: 277 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 336
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+AMD++G S++EQ +IF ++A ILHLGNI+FEKG + +V+KD K L + +
Sbjct: 337 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKD---KTALNAASTVF 393
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
+P LE AL + ++ +++ + L+ ++ SRD L K +Y RLF WLV KIN +
Sbjct: 394 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC 453
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
Q+ IGVLDI G Q CIN+TNEKLQQ FN ++FK+EQ +Y E+I+W
Sbjct: 454 QE-RKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINW 512
Query: 425 SYVHF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKP 481
+++ F +D+Q +DLI+ ++P GI+ALLDE +FP +T KL+ F K + ++ +P
Sbjct: 513 TFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEP 572
Query: 482 KLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF--PPXXXXX 539
+ ++++F + HYAG+V Y+ +L+KNKD + + + S + V+ LF P
Sbjct: 573 RFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 632
Query: 540 XXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGV 599
+++K QL LM TL +T PH++RC+ PNN+ P L+ V+ QLR GV
Sbjct: 633 KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGV 692
Query: 600 LEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWILEKM--DLKGYQIGK 657
LE IR+ G+P R +++F+ R+ +L P + + D + A +L+ + D + Y+ G
Sbjct: 693 LEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGI 752
Query: 658 TKVFLKAGQMAELDAKRAKLL 678
TK+F +AGQ+A ++ R + L
Sbjct: 753 TKIFFRAGQLARIEEAREQRL 773
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With
Tribromodichloropseudilin
Length = 776
Score = 569 bits (1466), Expect = e-162, Method: Compositional matrix adjust.
Identities = 292/681 (42%), Positives = 443/681 (65%), Gaps = 14/681 (2%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKG 66
G +DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ + +Y M++ +KG
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKIIP-IYTQEMVDIFKG 144
Query: 67 VPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA 126
+++PH+FAI+D AYR M+++ ++ S+L++GESGAGKTE TK +++YLA + G A
Sbjct: 145 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 204
Query: 127 EGRSV-EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
G V EQQ+L++NP+LEAFGNAKT +NNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 205 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 264
Query: 186 SRVCKISDPERNYHCFY-LLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV S+ ERNYH FY LL A +E + L P SF+YLNQS C ++ GV+D+ ++
Sbjct: 265 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 324
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+AMD++G S++EQ +IF ++A ILHLGNI+FEKG + +V+KD K L + +
Sbjct: 325 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKD---KTALNAASTVF 381
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
+P LE AL + ++ +++ + L+ ++ SRD L K +Y RLF WLV KIN +
Sbjct: 382 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVLC 441
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
Q+ IGVLDI G Q CIN+TNEKLQQ FN ++FK+EQ +Y E+I+W
Sbjct: 442 QE-RKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINW 500
Query: 425 SYVHF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKP 481
+++ F +D+Q +DLI+ ++P GI+ALLDE +FP +T KL+ F K + ++ +P
Sbjct: 501 TFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEP 560
Query: 482 KLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF--PPXXXXX 539
+ ++++F + HYAG+V Y+ +L+KNKD + + + S + V+ LF P
Sbjct: 561 RFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 620
Query: 540 XXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGV 599
+++K QL LM TL +T PH++RC+ PNN+ P L+ V+ QLR GV
Sbjct: 621 KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGV 680
Query: 600 LEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWILEKM--DLKGYQIGK 657
LE IR+ G+P R +++F+ R+ +L P + + D + A +L+ + D + Y+ G
Sbjct: 681 LEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGI 740
Query: 658 TKVFLKAGQMAELDAKRAKLL 678
TK+F +AGQ+A ++ R + L
Sbjct: 741 TKIFFRAGQLARIEEAREQRL 761
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYK|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYL|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
Length = 762
Score = 568 bits (1465), Expect = e-162, Method: Compositional matrix adjust.
Identities = 289/677 (42%), Positives = 442/677 (65%), Gaps = 14/677 (2%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKG 66
G +DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ + +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 67 VPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA 126
+++PH+FAI+D AYR M+++ ++ S+L++GESGAGKTE TK +++YLA + G A
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 127 EGRSV-EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
G V EQQ+L++NP+LEAFGNAKT +NNN+SRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNASRFGKFIEIQFNSAGFISGASIQSYLLEK 265
Query: 186 SRVCKISDPERNYHCFY-LLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV S+ ERNYH FY LL A +E + L P SF+YLNQS C ++ GV+D+ ++
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+AMD++G S++EQ +IF ++A ILHLGNI+FEKG + +V+KD K L + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKD---KTALNAASTVF 382
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
+P LE AL + ++ +++ + L+ ++ SRD L K +Y RLF WLV KIN +
Sbjct: 383 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC 442
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
Q+ IGVLDI G Q CIN+TNEKLQQ FN ++FK+EQ +Y E+I+W
Sbjct: 443 QE-RKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINW 501
Query: 425 SYVHF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKP 481
+++ F +D+Q +DLI+ ++P GI+ALLDE +FP +T KL+ F K + ++ +P
Sbjct: 502 TFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEP 561
Query: 482 KLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF--PPXXXXX 539
+ ++++F + HYAG+V Y+ +L+KNKD + + + S + V+ LF P
Sbjct: 562 RFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 621
Query: 540 XXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGV 599
+++K QL LM TL +T PH++RC+ PNN+ P L+ V+ QLR GV
Sbjct: 622 KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGV 681
Query: 600 LEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWILEKMDL--KGYQIGK 657
LE IR+ G+P R +++F+ R+ +L P + + D + A +L+ +++ + Y+ G
Sbjct: 682 LEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGI 741
Query: 658 TKVFLKAGQMAELDAKR 674
TK+F +AGQ+A ++ R
Sbjct: 742 TKIFFRAGQLARIEEAR 758
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
pdb|2Y8I|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 568 bits (1463), Expect = e-162, Method: Compositional matrix adjust.
Identities = 289/677 (42%), Positives = 441/677 (65%), Gaps = 14/677 (2%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKG 66
G +DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ + +Y M++ +KG
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 144
Query: 67 VPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA 126
+++PH+FAI+D AYR M+++ ++ S+L++GESGAGKTE TK +++YLA + G A
Sbjct: 145 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 204
Query: 127 EGRSV-EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
G V EQQ+L++NP+LEAFGNAKT +NNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 205 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 264
Query: 186 SRVCKISDPERNYHCFY-LLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV S+ ERNYH FY LL A +E + L P SF+YLNQS C ++ GV+D+ ++
Sbjct: 265 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 324
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+AMD++G S++EQ +IF ++A ILHLGNI+FEKG + +V+KD K L + +
Sbjct: 325 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKD---KTALNAASTVF 381
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
+P LE AL + ++ +++ + L+ ++ SRD L K +Y RLF WLV KIN +
Sbjct: 382 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC 441
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
Q+ IGVLDI G Q CIN+TNEKLQQ FN ++FK+EQ +Y E+I+W
Sbjct: 442 QE-RKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINW 500
Query: 425 SYVHF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKP 481
+++ F +D+Q +DLI+ ++P GI+ALLDE +FP +T KL+ F K + ++ +P
Sbjct: 501 TFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEP 560
Query: 482 KLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF--PPXXXXX 539
+ ++++F + HYAG+V Y+ +L+KNKD + + + S + V+ LF P
Sbjct: 561 RFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 620
Query: 540 XXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGV 599
+++K QL LM TL +T PH++RC+ PNN+ P L+ V+ QLR V
Sbjct: 621 KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNAV 680
Query: 600 LEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWILEKMDL--KGYQIGK 657
LE IR+ G+P R +++F+ R+ +L P + + D + A +L+ +++ + Y+ G
Sbjct: 681 LEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGI 740
Query: 658 TKVFLKAGQMAELDAKR 674
TK+F +AGQ+A ++ R
Sbjct: 741 TKIFFRAGQLARIEEAR 757
>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 568 bits (1463), Expect = e-162, Method: Compositional matrix adjust.
Identities = 289/677 (42%), Positives = 442/677 (65%), Gaps = 14/677 (2%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKG 66
G +DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ + +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 67 VPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA 126
+++PH+FAI+D AYR M+++ ++ S+L++GESGAGKTE TK +++YLA + G A
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 127 EGRSV-EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
G V EQQ+L++NP+LEAFGNAKT +NNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 186 SRVCKISDPERNYHCFY-LLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV S+ ERNYH FY LL A +E + L P SF+YLNQS C ++ GV+D+ ++
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+AMD++G S++EQ +IF ++A ILHLGNI+FEKG + +V+KD K L + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKD---KTALNAASTVF 382
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
+P LE AL + ++ +++ + L+ ++ SRD L K +Y RLF WLV KIN +
Sbjct: 383 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC 442
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
Q+ IGVLDI G Q CIN+TNEKLQQ FN ++FK+EQ +Y E+I+W
Sbjct: 443 QE-RKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINW 501
Query: 425 SYVHF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKP 481
+++ F +D+Q +DLI+ ++P GI+ALLDE +FP +T KL+ F K + ++ +P
Sbjct: 502 TFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEP 561
Query: 482 KLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF--PPXXXXX 539
+ ++++F + HYAG+V Y+ +L+KNKD + + + S + V+ LF P
Sbjct: 562 RFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 621
Query: 540 XXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGV 599
+++K QL LM TL +T PH++RC+ PNN+ P L+ V+ QLR GV
Sbjct: 622 KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGV 681
Query: 600 LEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWILEKMDL--KGYQIGK 657
LE IR+ G+P R +++F+ R+ +L P + + D + A +L+ +++ + ++ G
Sbjct: 682 LEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGI 741
Query: 658 TKVFLKAGQMAELDAKR 674
TK+F +AGQ+A ++ R
Sbjct: 742 TKIFFRAGQLARIEEAR 758
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Bef3
pdb|1MND|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Alf4
pdb|1MNE|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mg-Pyrophosphate
pdb|1VOM|A Chain A, Complex Between Dictyostelium Myosin And Mgadp And
Vanadate At 1.9a Resolution
Length = 762
Score = 568 bits (1463), Expect = e-161, Method: Compositional matrix adjust.
Identities = 290/677 (42%), Positives = 441/677 (65%), Gaps = 14/677 (2%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKG 66
G +DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ + +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 67 VPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA 126
+++PH+FAI+D AYR M+++ ++ S+L++GESGAGKTE TK +++YLA + G A
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 127 EGRSV-EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
G V EQQ+L++NP+LEAFGNAKT +NNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 186 SRVCKISDPERNYHCFY-LLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV S+ ERNYH FY LL A +E + L P SF+YLNQS C ++ GV+D +++
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFK 325
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+AMD++G S++EQ +IF ++A ILHLGNI+FEKG + +V+KD K L + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKD---KTALNAASTVF 382
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
+P LE AL + ++ +++ + L+ ++ SRD L K +Y RLF WLV KIN +
Sbjct: 383 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC 442
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
+ + IGVLDI G Q CIN+TNEKLQQ FN ++FK+EQ +Y E+I+W
Sbjct: 443 SE-RAAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINW 501
Query: 425 SYVHF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKP 481
+++ F +D+Q +DLI+ ++P GI+ALLDE +FP +T KL+ F K + ++ +P
Sbjct: 502 TFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEP 561
Query: 482 KLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF--PPXXXXX 539
+ ++++F + HYAG+V Y+ +L+KNKD + + + S + V+ LF P
Sbjct: 562 RFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 621
Query: 540 XXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGV 599
+++K QL LM TL +T PH++RC+ PNN+ P L+ V+ QLR GV
Sbjct: 622 KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGV 681
Query: 600 LEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWILEKM--DLKGYQIGK 657
LE IR+ G+P R +++F+ R+ +L P + + D + A +L+ + D + Y+ G
Sbjct: 682 LEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGI 741
Query: 658 TKVFLKAGQMAELDAKR 674
TK+F +AGQ+A ++ R
Sbjct: 742 TKIFFRAGQLARIEEAR 758
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 566 bits (1459), Expect = e-161, Method: Compositional matrix adjust.
Identities = 289/677 (42%), Positives = 441/677 (65%), Gaps = 14/677 (2%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKG 66
G +DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ + +Y M++ +KG
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 144
Query: 67 VPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA 126
+++PH+FAI+D AYR M+++ ++ S+L++GESGAGKTE TK +++YLA + G A
Sbjct: 145 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 204
Query: 127 EGRSV-EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
G V EQQ+L++NP+LEAFGNAKT +NNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 205 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 264
Query: 186 SRVCKISDPERNYHCFY-LLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV S+ ERNYH FY LL A +E + L P SF+YLNQS C ++ GV+D+ ++
Sbjct: 265 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 324
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+AMD++G S++EQ +IF ++A ILHLGNI+FEKG + +V+KD K L + +
Sbjct: 325 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKD---KTALNAASTVF 381
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
+P LE AL + ++ +++ + L+ ++ SRD L K +Y RLF WLV KIN +
Sbjct: 382 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC 441
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
Q+ IGVLDI G Q CIN+TNEKLQQ FN ++FK+EQ +Y E+I+W
Sbjct: 442 QE-RKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINW 500
Query: 425 SYVHF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKP 481
+++ F +D+Q +DLI+ ++P GI+ALLDE +FP +T KL+ F K + ++ +P
Sbjct: 501 TFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEP 560
Query: 482 KLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF--PPXXXXX 539
+ ++++F + HYAG+V Y+ +L+KNKD + + + S + V+ LF P
Sbjct: 561 RFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 620
Query: 540 XXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGV 599
+++K QL LM TL +T PH++RC+ PNN+ P L+ V+ QLR V
Sbjct: 621 KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNVV 680
Query: 600 LEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWILEKMDL--KGYQIGK 657
LE IR+ G+P R +++F+ R+ +L P + + D + A +L+ +++ + Y+ G
Sbjct: 681 LEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGI 740
Query: 658 TKVFLKAGQMAELDAKR 674
TK+F +AGQ+A ++ R
Sbjct: 741 TKIFFRAGQLARIEEAR 757
>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With
Bound Mgadp-Befx
Length = 770
Score = 566 bits (1459), Expect = e-161, Method: Compositional matrix adjust.
Identities = 289/677 (42%), Positives = 441/677 (65%), Gaps = 14/677 (2%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKG 66
G +DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ + +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 67 VPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA 126
+++PH+FAI+D AYR M+++ ++ S+L++GESGAGKTE TK +++YLA + G A
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 127 EGRSV-EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
G V EQQ+L++NP+LEAFGNAKT +NNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 265
Query: 186 SRVCKISDPERNYHCFY-LLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV S+ ERNYH FY LL A +E + L P SF+YLNQS C ++ GV+D+ ++
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+AMD++G S++EQ +IF ++A ILHLGNI+FEKG + +V+KD K L + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKD---KTALNAASTVF 382
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
+P LE AL + ++ +++ + L+ ++ SRD L K +Y RLF WLV KIN +
Sbjct: 383 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC 442
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
++ IGVLDI G Q CIN+TNEKLQQ FN ++FK+EQ +Y E+I+W
Sbjct: 443 EE-RKAYFIGVLDIEGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINW 501
Query: 425 SYVHF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKP 481
+++ F +D+Q +DLI+ ++P GI+ALLDE +FP +T KL+ F K + ++ +P
Sbjct: 502 TFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEP 561
Query: 482 KLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF--PPXXXXX 539
+ ++++F + HYAG+V Y+ +L+KNKD + + + S + V+ LF P
Sbjct: 562 RFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 621
Query: 540 XXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGV 599
+++K QL LM TL +T PH++RC+ PNN+ P L+ V+ QLR GV
Sbjct: 622 KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGV 681
Query: 600 LEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWILEKM--DLKGYQIGK 657
LE IR+ G+P R +++F+ R+ +L P + + D + A +L+ + D + ++ G
Sbjct: 682 LEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGI 741
Query: 658 TKVFLKAGQMAELDAKR 674
TK+F +AGQ+A ++ R
Sbjct: 742 TKIFFRAGQLARIEEAR 758
>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 564 bits (1454), Expect = e-161, Method: Compositional matrix adjust.
Identities = 290/677 (42%), Positives = 439/677 (64%), Gaps = 14/677 (2%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKG 66
G +DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ + +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 67 VPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA 126
+++PH+FAI+D AYR M+++ ++ S+L++GESGAGKTE TK +++YLA + G A
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 127 EGRSV-EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
G V EQQ+L++NP+LEAFGNAKT +NNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 186 SRVCKISDPERNYHCFY-LLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV S ERNYH FY LL A +E + L P SF+YLNQS C ++ GV+D +++
Sbjct: 266 SRVVFQSTTERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFK 325
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+AMD++G S++EQ +IF ++A ILHLGNI+FEKG + +V+KD K L + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKD---KTALNAASTVF 382
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
+P LE AL + ++ +++ + L+ ++ SRD L K +Y RLF WLV KIN +
Sbjct: 383 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC 442
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
+ IGVLDI G Q CIN+TNEKLQQ FN ++FK+EQ +Y E+I+W
Sbjct: 443 SE-RKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINW 501
Query: 425 SYVHF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKP 481
+++ F +D+Q +DLI+ ++P GI+ALLDE +FP +T KL+ F K + ++ +P
Sbjct: 502 TFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEP 561
Query: 482 KLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF--PPXXXXX 539
+ ++++F + HYAG+V Y+ +L+KNKD + + + S + V+ LF P
Sbjct: 562 RFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 621
Query: 540 XXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGV 599
+++K QL LM TL +T PH++RC+ PNN+ P L+ V+ QLR GV
Sbjct: 622 KKGANFLTVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGV 681
Query: 600 LEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWILEKM--DLKGYQIGK 657
LEAIR+ G+P R +++F+ R+ L P + + D + A +L+ + D + ++ G
Sbjct: 682 LEAIRITRKGFPNRIIYADFVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGI 741
Query: 658 TKVFLKAGQMAELDAKR 674
TK+F +AGQ+A ++ R
Sbjct: 742 TKIFFRAGQLARIEEAR 758
>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N-
Methylanthraniloyl) Nucleotide Bound To Dictyostelium
Discoideum Myosin Motor Domain
Length = 762
Score = 562 bits (1448), Expect = e-160, Method: Compositional matrix adjust.
Identities = 289/677 (42%), Positives = 437/677 (64%), Gaps = 14/677 (2%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKG 66
G +DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ + +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 67 VPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA 126
+++PH+FAI+D AYR M+++ ++ S+L++GESGAGKTE TK +++YLA + G A
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 127 EGRSV-EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
G V EQQ+L++NP+LEAFGNAKT +NNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 186 SRVCKISDPERNYHCFY-LLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV S ERNYH FY LL A +E + L P SF+YLNQS C ++ GV+D +++
Sbjct: 266 SRVVFQSTSERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFK 325
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+AMD++G S++EQ +IF ++A ILHLGNI+FEKG + +V+KD K L + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKD---KTALNAASTVF 382
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
+P LE AL + ++ +++ + L+ ++ SRD L K +Y RLF WLV KIN +
Sbjct: 383 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC 442
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
+ IGVLDI G Q CIN+TNEKLQQ FN ++FK+EQ Y E+I+W
Sbjct: 443 SE-RKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEKYLKEKINW 501
Query: 425 SYVHF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKP 481
+++ F +D+Q +DLI+ ++P GI+ALLDE +FP +T KL+ F K + ++ +P
Sbjct: 502 TFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEP 561
Query: 482 KLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF--PPXXXXX 539
+ ++++F + HYAG+V Y+ +L+KNKD + + + S + V+ LF P
Sbjct: 562 RFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 621
Query: 540 XXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGV 599
+++K QL LM TL +T PH++RC+ PNN+ P L+ V+ QLR GV
Sbjct: 622 KKGANFLTVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGV 681
Query: 600 LEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWILEKM--DLKGYQIGK 657
LE IR+ G+P R +++F+ R+ L P + + D + A +L+ + D + ++ G
Sbjct: 682 LEGIRITRKGFPNRIIYADFVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGI 741
Query: 658 TKVFLKAGQMAELDAKR 674
TK+F +AGQ+A ++ R
Sbjct: 742 TKIFFRAGQLARIEEAR 758
>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 561 bits (1446), Expect = e-160, Method: Compositional matrix adjust.
Identities = 288/677 (42%), Positives = 438/677 (64%), Gaps = 14/677 (2%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKG 66
G +DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ + +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 67 VPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA 126
+++PH+FAI+D AYR M+++ ++ S+L++GESGAGKTE TK +++YLA + G A
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 127 EGRSV-EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
G V EQQ+L++NP+LEAFGNAKT +NNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 186 SRVCKISDPERNYHCFY-LLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV S ERNYH FY LL A +E + L P SF+YLNQS C ++ GV+D ++
Sbjct: 266 SRVVFQSTTERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEEEFK 325
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+AMD++G S++EQ +IF ++A ILHLGNI+FEKG + +V+KD K L + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKD---KTALNAASTVF 382
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
+P LE AL + ++ +++ + L+ ++ SRD L K +Y RLF WLV KIN +
Sbjct: 383 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC 442
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
+ IGVLDI G Q CIN+TNEKLQQ FN ++FK+EQ +Y E+I+W
Sbjct: 443 SE-RKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINW 501
Query: 425 SYVHF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKP 481
+++ F +D+Q +DLI+ ++P GI+ALLDE +FP +T KL+ F K + ++ +P
Sbjct: 502 TFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEP 561
Query: 482 KLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF--PPXXXXX 539
+ ++++F + HYAG+V Y+ +L+KNKD + + + S + V+ LF P
Sbjct: 562 RFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 621
Query: 540 XXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGV 599
+++K QL LM TL +T PH++RC+ PNN+ P L+ V+ QLR GV
Sbjct: 622 KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGV 681
Query: 600 LEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWILEKMDL--KGYQIGK 657
LE IR+ G+P R +++F+ R+ L P + + D + A +L+ +++ + ++ G
Sbjct: 682 LEGIRITRKGFPNRIIYADFVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGI 741
Query: 658 TKVFLKAGQMAELDAKR 674
TK+F +AGQ+A ++ R
Sbjct: 742 TKIFFRAGQLARIEEAR 758
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|A Chain A, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 795
Score = 548 bits (1413), Expect = e-156, Method: Compositional matrix adjust.
Identities = 304/728 (41%), Positives = 426/728 (58%), Gaps = 40/728 (5%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRY-EINEIYTYTGNILIALNPFQPLSHLYDAYMMERYK 65
G +D+T LSYLHEP VLHNL R+ + IYTY G +L+A+NP++ L +Y ++ Y
Sbjct: 70 GENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP-IYGEDIINAYS 128
Query: 66 GVPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTA 125
G G + PH+FA+A+ AY++M + ++ SI+VSGESGAGKT + K MRY A + G +
Sbjct: 129 GQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSG--S 186
Query: 126 AEGRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
A +VE++VL SNP++E+ GNAKT +N+NSSRFGK++EI FDKR RI GA +RTYLLE+
Sbjct: 187 ASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEK 246
Query: 186 SRVCKISDPERNYHCFYLLCA-APPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV ++ ERNYH FY LCA A E + +LGN FHY Q + G++DA + +
Sbjct: 247 SRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEMV 306
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+A ++GIS Q IF ++A ILHLGN+EF + DS + L + L+
Sbjct: 307 NTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKHDP--LTIFCDLM 364
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
D E+ LC R + T E K + + A +RD LAK IY+ LF+W+VD +N ++
Sbjct: 365 GVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALH 424
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
IGVLDIYG QFCIN+ NEKLQQ FN +VFK+EQ +Y E+I W
Sbjct: 425 STVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPW 484
Query: 425 SYVHFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLYQTFKDH-KRFIKPKL 483
+ + F DNQ ++LIE K G++ LLDE C PK + + ++QKLY T + F KP+L
Sbjct: 485 TLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRL 543
Query: 484 TRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASE------------------- 524
+ F I H+A +V YQ + FL+KNKD V E +L +S+
Sbjct: 544 SNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPT 603
Query: 525 CSFVSGLFP---------PXXXXXXXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVK 575
+ SG P G +F+ L LM+TLN+T PHY+RC+K
Sbjct: 604 SATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIK 663
Query: 576 PNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNY 635
PN+ P D +QQLR+ GVLE IR+ AG+P+R T+ EF R+ +L+ + +
Sbjct: 664 PNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQ-KDVLS 722
Query: 636 DEKIACKWILEK--MDLKGYQIGKTKVFLKAGQMAELDAKRAKLLGHSAEVIQSQHRRRV 693
D K CK +LEK +D YQ GKTK+F +AGQ+A L+ RA L + IQ R +
Sbjct: 723 DRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWL 782
Query: 694 TQKHYITL 701
+K Y+ +
Sbjct: 783 MRKKYMRM 790
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|B Chain B, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|C Chain C, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|D Chain D, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
Length = 766
Score = 543 bits (1400), Expect = e-154, Method: Compositional matrix adjust.
Identities = 299/702 (42%), Positives = 416/702 (59%), Gaps = 40/702 (5%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRY-EINEIYTYTGNILIALNPFQPLSHLYDAYMMERYK 65
G +D+T LSYLHEP VLHNL R+ + IYTY G +L+A+NP++ L +Y ++ Y
Sbjct: 70 GENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP-IYGEDIINAYS 128
Query: 66 GVPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTA 125
G G + PH+FA+A+ AY++M + ++ SI+VSGESGAGKT + K MRY A + G +
Sbjct: 129 GQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSG--S 186
Query: 126 AEGRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
A +VE++VL SNP++E+ GNAKT +N+NSSRFGK++EI FDKR RI GA +RTYLLE+
Sbjct: 187 ASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEK 246
Query: 186 SRVCKISDPERNYHCFYLLCA-APPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV ++ ERNYH FY LCA A E + +LGN FHY Q + G++DA + +
Sbjct: 247 SRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEMV 306
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+A ++GIS Q IF ++A ILHLGN+EF + DS + L + L+
Sbjct: 307 NTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKHDP--LTIFCDLM 364
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
D E+ LC R + T E K + + A +RD LAK IY+ LF+W+VD +N ++
Sbjct: 365 GVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALH 424
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
IGVLDIYG QFCIN+ NEKLQQ FN +VFK+EQ +Y E+I W
Sbjct: 425 STVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPW 484
Query: 425 SYVHFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLYQTFKDH-KRFIKPKL 483
+ + F DNQ ++LIE K G++ LLDE C PK + + ++QKLY T + F KP+L
Sbjct: 485 TLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRL 543
Query: 484 TRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASE------------------- 524
+ F I H+A +V YQ + FL+KNKD V E +L +S+
Sbjct: 544 SNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPT 603
Query: 525 CSFVSGLFP-------PXXXX--XXXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVK 575
+ SG P P G +F+ L LM+TLN+T PHY+RC+K
Sbjct: 604 SATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIK 663
Query: 576 PNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNY 635
PN+ P D +QQLR+ GVLE IR+ AG+P+R T+ EF R+ +L+ + +
Sbjct: 664 PNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQ-KDVLS 722
Query: 636 DEKIACKWILEK--MDLKGYQIGKTKVFLKAGQMAELDAKRA 675
D K CK +LEK +D YQ GKTK+F +AGQ+A L+ RA
Sbjct: 723 DRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRA 764
>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum
Motor Domain S456y Mutant In Complex With
Adp-Orthovanadate
Length = 692
Score = 537 bits (1383), Expect = e-152, Method: Compositional matrix adjust.
Identities = 273/612 (44%), Positives = 404/612 (66%), Gaps = 12/612 (1%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKG 66
G +DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ + +Y M++ +KG
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 144
Query: 67 VPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA 126
+++PH+FAI+D AYR M+++ ++ S+L++GESGAGKTE TK +++YLA + G A
Sbjct: 145 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 204
Query: 127 EGRSV-EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
G V EQQ+L++NP+LEAFGNAKT +NNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 205 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 264
Query: 186 SRVCKISDPERNYHCFY-LLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV S+ ERNYH FY LL A +E + L P SF+YLNQS C ++ GV+D+ ++
Sbjct: 265 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 324
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+AMD++G S++EQ +IF ++A ILHLGNI+FEKG + +V+KD K L + +
Sbjct: 325 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKD---KTALNAASTVF 381
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
+P LE AL + ++ +++ + L+ ++ SRD L K +Y RLF WLV KIN +
Sbjct: 382 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC 441
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
Q+ IGVLDIYG Q CIN+TNEKLQQ FN ++FK+EQ +Y E+I+W
Sbjct: 442 QE-RKAYFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINW 500
Query: 425 SYVHF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKP 481
+++ F +D+Q +DLI+ ++P GI+ALLDE +FP +T KL+ F K + ++ +P
Sbjct: 501 TFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEP 560
Query: 482 KLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF--PPXXXXX 539
+ ++++F + HYAG+V Y+ +L+KNKD + + + S + V+ LF P
Sbjct: 561 RFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 620
Query: 540 XXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGV 599
+++K QL LM TL +T PH++RC+ PNN+ P L+ V+ QLR GV
Sbjct: 621 KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGV 680
Query: 600 LEAIRVKCAGYP 611
LE IR+ G+P
Sbjct: 681 LEGIRITRKGFP 692
>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentachlorocarbazole
Length = 695
Score = 535 bits (1377), Expect = e-152, Method: Compositional matrix adjust.
Identities = 273/614 (44%), Positives = 404/614 (65%), Gaps = 12/614 (1%)
Query: 7 GADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKG 66
G +DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ + +Y M++ +KG
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKIIP-IYTQEMVDIFKG 144
Query: 67 VPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA 126
+++PH+FAI+D AYR M+++ ++ S+L++GESGAGKTE TK +++YLA + G A
Sbjct: 145 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 204
Query: 127 EGRSV-EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLER 185
G V EQQ+L++NP+LEAFGNAKT +NNNSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 205 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 264
Query: 186 SRVCKISDPERNYHCFY-LLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDYL 244
SRV S+ ERNYH FY LL A +E + L P SF+YLNQS C ++ GV+D+ ++
Sbjct: 265 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 324
Query: 245 ATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLL 304
TR+AMD++G S++EQ +IF ++A ILHLGNI+FEKG + +V+KD K L + +
Sbjct: 325 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKD---KTALNAASTVF 381
Query: 305 MCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIG 364
+P LE AL + ++ +++ + L+ ++ SRD L K +Y RLF WLV KIN +
Sbjct: 382 GVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVLC 441
Query: 365 QDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDW 424
Q+ IGVLDI G Q CIN+TNEKLQQ FN ++FK+EQ +Y E+I+W
Sbjct: 442 QE-RKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINW 500
Query: 425 SYVHF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKP 481
+++ F +D+Q +DLI+ ++P GI+ALLDE +FP +T KL+ F K + ++ +P
Sbjct: 501 TFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEP 560
Query: 482 KLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF--PPXXXXX 539
+ ++++F + HYAG+V Y+ +L+KNKD + + + S + V+ LF P
Sbjct: 561 RFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRA 620
Query: 540 XXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGV 599
+++K QL LM TL +T PH++RC+ PNN+ P L+ V+ QLR GV
Sbjct: 621 KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGV 680
Query: 600 LEAIRVKCAGYPTR 613
LE IR+ G+P R
Sbjct: 681 LEGIRITRKGFPNR 694
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|2VB6|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 788
Score = 474 bits (1220), Expect = e-133, Method: Compositional matrix adjust.
Identities = 270/704 (38%), Positives = 400/704 (56%), Gaps = 31/704 (4%)
Query: 8 ADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGV 67
+D L YL+E +LHN+ RY + IYTY NILIA+NP+ + +Y + ++ Y+G
Sbjct: 58 VEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGK 117
Query: 68 PFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAAE 127
G + PHVFAIAD A+R+M S SI+VSGESGAGKTE TK ++RYL +
Sbjct: 118 SLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT----ESYGT 173
Query: 128 GRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLERSR 187
G+ ++ +++E+NP+LEAFGNAKTV+NNNSSRFGKFVEI F+++ + G + YLLE+SR
Sbjct: 174 GQDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSR 233
Query: 188 VCKISDPERNYHCFYLLCAAPPDEI-ERYKLGNPTSFHYLNQSNCYELVGVNDANDYLAT 246
+C ERNYH FY LCA ++I ER L +P +F YLN+ + ++D D++
Sbjct: 234 ICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRM 293
Query: 247 RRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEK-GEEDSSVVKDNESKFHLQMTAKLLM 305
AM IG+ +E+ +F VVA +LHLGNI+FE+ G N+S L+ A+LL
Sbjct: 294 CTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLG 353
Query: 306 CDPGELEDALCKRVMITPE-----EIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKIN 360
D +L +L RVM+T +IK L A +RD LAKT+YS LFD +V+++N
Sbjct: 354 LDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVN 413
Query: 361 VSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNE 420
+ S IGVLDI G QFCIN+ NEKLQQ FN+ + K EQ Y+ E
Sbjct: 414 QCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKE 472
Query: 421 EIDWSYVHFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLYQTFKDHKRFIK 480
+ + VH+VDNQD +DLIE + GI+ +LDE P+ + ++F+ ++Q KDH R
Sbjct: 473 GLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSI 532
Query: 481 PKLT--------RSD--FTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSG 530
P+ + R D F I H+AG V Y++ F++KN D + + L+ S F+
Sbjct: 533 PRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRE 592
Query: 531 LFPPXXXXXXXXXXXX------XXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVI 584
LF G++FK QL L+D L ST +IRC+KPN ++
Sbjct: 593 LFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHH 652
Query: 585 LDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWI 644
+ ++ QL+ G++ + + G+P+R +F E + + +P+ + D ++ CK +
Sbjct: 653 FEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPD-KLARLDPRLFCKAL 711
Query: 645 LEKMDLK--GYQIGKTKVFLKAGQMAELDAKRAKLLGHSAEVIQ 686
+ + L Y+ G TKVF + G+ AE D H AE+++
Sbjct: 712 FKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVK 755
>pdb|2X51|A Chain A, M6 Delta Insert1
Length = 789
Score = 474 bits (1220), Expect = e-133, Method: Compositional matrix adjust.
Identities = 270/704 (38%), Positives = 400/704 (56%), Gaps = 31/704 (4%)
Query: 8 ADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGV 67
+D L YL+E +LHN+ RY + IYTY NILIA+NP+ + +Y + ++ Y+G
Sbjct: 59 VEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGK 118
Query: 68 PFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAAE 127
G + PHVFAIAD A+R+M S SI+VSGESGAGKTE TK ++RYL +
Sbjct: 119 SLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT----ESYGT 174
Query: 128 GRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLERSR 187
G+ ++ +++E+NP+LEAFGNAKTV+NNNSSRFGKFVEI F+++ + G + YLLE+SR
Sbjct: 175 GQDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSR 234
Query: 188 VCKISDPERNYHCFYLLCAAPPDEI-ERYKLGNPTSFHYLNQSNCYELVGVNDANDYLAT 246
+C ERNYH FY LCA ++I ER L +P +F YLN+ + ++D D++
Sbjct: 235 ICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRM 294
Query: 247 RRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEK-GEEDSSVVKDNESKFHLQMTAKLLM 305
AM IG+ +E+ +F VVA +LHLGNI+FE+ G N+S L+ A+LL
Sbjct: 295 CTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLG 354
Query: 306 CDPGELEDALCKRVMITPE-----EIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKIN 360
D +L +L RVM+T +IK L A +RD LAKT+YS LFD +V+++N
Sbjct: 355 LDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVN 414
Query: 361 VSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNE 420
+ S IGVLDI G QFCIN+ NEKLQQ FN+ + K EQ Y+ E
Sbjct: 415 QCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKE 473
Query: 421 EIDWSYVHFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLYQTFKDHKRFIK 480
+ + VH+VDNQD +DLIE + GI+ +LDE P+ + ++F+ ++Q KDH R
Sbjct: 474 GLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSI 533
Query: 481 PKLT--------RSD--FTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSG 530
P+ + R D F I H+AG V Y++ F++KN D + + L+ S F+
Sbjct: 534 PRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRE 593
Query: 531 LFPPXXXXXXXXXXXX------XXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVI 584
LF G++FK QL L+D L ST +IRC+KPN ++
Sbjct: 594 LFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHH 653
Query: 585 LDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWI 644
+ ++ QL+ G++ + + G+P+R +F E + + +P+ + D ++ CK +
Sbjct: 654 FEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPD-KLARLDPRLFCKAL 712
Query: 645 LEKMDLK--GYQIGKTKVFLKAGQMAELDAKRAKLLGHSAEVIQ 686
+ + L Y+ G TKVF + G+ AE D H AE+++
Sbjct: 713 FKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVK 756
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 788
Score = 473 bits (1217), Expect = e-133, Method: Compositional matrix adjust.
Identities = 270/704 (38%), Positives = 399/704 (56%), Gaps = 31/704 (4%)
Query: 8 ADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGV 67
+D L YL+E +LHN+ RY + IYTY NILIA+NP+ + +Y + ++ Y+G
Sbjct: 58 VEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGK 117
Query: 68 PFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAAE 127
G + PHVFAIAD A+R+M S SI+VSGESGAGKTE TK ++RYL +
Sbjct: 118 SLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT----ESYGT 173
Query: 128 GRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLERSR 187
G+ + +++E+NP+LEAFGNAKTV+NNNSSRFGKFVEI F+++ + G + YLLE+SR
Sbjct: 174 GQDIYDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSR 233
Query: 188 VCKISDPERNYHCFYLLCAAPPDEI-ERYKLGNPTSFHYLNQSNCYELVGVNDANDYLAT 246
+C ERNYH FY LCA ++I ER L +P +F YLN+ + ++D D++
Sbjct: 234 ICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRM 293
Query: 247 RRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEK-GEEDSSVVKDNESKFHLQMTAKLLM 305
AM IG+ +E+ +F VVA +LHLGNI+FE+ G N+S L+ A+LL
Sbjct: 294 CTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLG 353
Query: 306 CDPGELEDALCKRVMITPE-----EIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKIN 360
D +L +L RVM+T +IK L A +RD LAKT+YS LFD +V+++N
Sbjct: 354 LDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVN 413
Query: 361 VSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYRNE 420
+ S IGVLDI G QFCIN+ NEKLQQ FN+ + K EQ Y+ E
Sbjct: 414 QCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKE 472
Query: 421 EIDWSYVHFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLYQTFKDHKRFIK 480
+ + VH+VDNQD +DLIE + GI+ +LDE P+ + ++F+ ++Q KDH R
Sbjct: 473 GLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSI 532
Query: 481 PKLT--------RSD--FTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSG 530
P+ + R D F I H+AG V Y++ F++KN D + + L+ S F+
Sbjct: 533 PRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRE 592
Query: 531 LFPPXXXXXXXXXXXX------XXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVI 584
LF G++FK QL L+D L ST +IRC+KPN ++
Sbjct: 593 LFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHH 652
Query: 585 LDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWI 644
+ ++ QL+ G++ + + G+P+R +F E + + +P+ + D ++ CK +
Sbjct: 653 FEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPD-KLARLDPRLFCKAL 711
Query: 645 LEKMDLK--GYQIGKTKVFLKAGQMAELDAKRAKLLGHSAEVIQ 686
+ + L Y+ G TKVF + G+ AE D H AE+++
Sbjct: 712 FKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVK 755
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
Length = 814
Score = 465 bits (1197), Expect = e-131, Method: Compositional matrix adjust.
Identities = 271/730 (37%), Positives = 402/730 (55%), Gaps = 57/730 (7%)
Query: 8 ADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGV 67
+D L YL+E +LHN+ RY + IYTY NILIA+NP+ + +Y + ++ Y+G
Sbjct: 58 VEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGK 117
Query: 68 PFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAAE 127
G + PHVFAIAD A+R+M S SI+VSGESGAGKTE TK ++RYL +
Sbjct: 118 SLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT----ESYGT 173
Query: 128 GRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLERSR 187
G+ ++ +++E+NP+LEAFGNAKTV+NNNSSRFGKFVEI F+++ + G + YLLE+SR
Sbjct: 174 GQDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSR 233
Query: 188 VCKISDPERNYHCFYLLCAAPPDEI-ERYKLGNPTSFHYLN------------------- 227
+C ERNYH FY LCA ++I ER L +P +F YLN
Sbjct: 234 ICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQN 293
Query: 228 -------QSNCYELVGVNDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEK 280
++ + G++D D++ AM IG+ +E+ +F VVA +LHLGNI+FE+
Sbjct: 294 RKSPEYLKAGSLKDPGLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEE 353
Query: 281 -GEEDSSVVKDNESKFHLQMTAKLLMCDPGELEDALCKRVMITPE-----EIIKKSLDPV 334
G N+S L+ A+LL D +L +L RVM+T +IK L
Sbjct: 354 AGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVE 413
Query: 335 AATVSRDGLAKTIYSRLFDWLVDKINVSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCI 394
A +RD LAKT+YS LFD +V+++N + S IGVLDI G QFCI
Sbjct: 414 QANNARDALAKTVYSHLFDHVVNRVNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCI 472
Query: 395 NFTNEKLQQHFNQNVFKMEQNDYRNEEIDWSYVHFVDNQDVLDLIEKKPGGIIALLDEAC 454
N+ NEKLQQ FN+ + K EQ Y+ E + + VH+VDNQD +DLIE + GI+ +LDE
Sbjct: 473 NYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEEN 532
Query: 455 MFPKSTHENFSQKLYQTFKDHKRFIKPKLT--------RSD--FTIVHYAGEVHYQSDLF 504
P+ + ++F+ ++Q KDH R P+ + R D F I H+AG V Y++ F
Sbjct: 533 RLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQF 592
Query: 505 LDKNKDYVVAEHQDLLSASECSFVSGLFPPXXXXXXXXXXXX------XXGSRFKLQLQQ 558
++KN D + + L+ S F+ LF G++FK QL
Sbjct: 593 VEKNNDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNL 652
Query: 559 LMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSE 618
L+D L ST +IRC+KPN ++ + ++ QL+ G++ + + G+P+R +F E
Sbjct: 653 LLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHE 712
Query: 619 FLDRFGILLPEIRKQNYDEKIACKWILEKMDLK--GYQIGKTKVFLKAGQMAELDAKRAK 676
+ + +P+ + D ++ CK + + + L Y+ G TKVF + G+ AE D
Sbjct: 713 LYNMYKKYMPD-KLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKS 771
Query: 677 LLGHSAEVIQ 686
H AE+++
Sbjct: 772 DPDHLAELVK 781
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
Length = 858
Score = 464 bits (1193), Expect = e-130, Method: Compositional matrix adjust.
Identities = 273/730 (37%), Positives = 402/730 (55%), Gaps = 57/730 (7%)
Query: 8 ADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGV 67
+D L YL+E +LHN+ RY + IYTY NILIA+NP+ + +Y + ++ Y+G
Sbjct: 59 VEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGK 118
Query: 68 PFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAAE 127
G + PHVFAIAD A+R+M S SI+VSGESGAGKTE TK ++RYL +
Sbjct: 119 SLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT----ESYGT 174
Query: 128 GRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLERSR 187
G+ ++ +++E+NP+LEAFGNAKTV+NNNSSRFGKFVEI F+++ + G + YLLE+SR
Sbjct: 175 GQDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSR 234
Query: 188 VCKISDPERNYHCFYLLCAAPPDEI-ERYKLGNPTSFHYLN------------------- 227
+C ERNYH FY LCA ++I ER L +P +F YLN
Sbjct: 235 ICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQN 294
Query: 228 -QSNCYELVG------VNDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEK 280
+S Y G ++D D++ AM IG+ +E+ +F VVA +LHLGNI+FE+
Sbjct: 295 RKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEE 354
Query: 281 -GEEDSSVVKDNESKFHLQMTAKLLMCDPGELEDALCKRVMITPE-----EIIKKSLDPV 334
G N+S L+ A+LL D +L +L RVM+T +IK L
Sbjct: 355 AGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVE 414
Query: 335 AATVSRDGLAKTIYSRLFDWLVDKINVSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCI 394
A +RD LAKT+YS LFD +V+++N + S IGVLDI G QFCI
Sbjct: 415 QANNARDALAKTVYSHLFDHVVNRVNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCI 473
Query: 395 NFTNEKLQQHFNQNVFKMEQNDYRNEEIDWSYVHFVDNQDVLDLIEKKPGGIIALLDEAC 454
N+ NEKLQQ FN+ + K EQ Y+ E + + VH+VDNQD +DLIE + GI+ +LDE
Sbjct: 474 NYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEEN 533
Query: 455 MFPKSTHENFSQKLYQTFKDHKRFIKPKLT--------RSD--FTIVHYAGEVHYQSDLF 504
P+ + ++F+ ++Q KDH R P+ + R D F I H+AG V Y++ F
Sbjct: 534 RLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQF 593
Query: 505 LDKNKDYVVAEHQDLLSASECSFVSGLFPPXXXXXXXXXXXX------XXGSRFKLQLQQ 558
++KN D + + L+ S F+ LF G++FK QL
Sbjct: 594 VEKNNDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNL 653
Query: 559 LMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSE 618
L+D L ST +IRC+KPN ++ + ++ QL+ G++ + + G+P+R +F E
Sbjct: 654 LLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHE 713
Query: 619 FLDRFGILLPEIRKQNYDEKIACKWILEKMDLK--GYQIGKTKVFLKAGQMAELDAKRAK 676
+ + +P+ + D ++ CK + + + L Y+ G TKVF + G+ AE D
Sbjct: 714 LYNMYKKYMPD-KLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKS 772
Query: 677 LLGHSAEVIQ 686
H AE+++
Sbjct: 773 DPDHLAELVK 782
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
Length = 814
Score = 463 bits (1192), Expect = e-130, Method: Compositional matrix adjust.
Identities = 273/730 (37%), Positives = 402/730 (55%), Gaps = 57/730 (7%)
Query: 8 ADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGV 67
+D L YL+E +LHN+ RY + IYTY NILIA+NP+ + +Y + ++ Y+G
Sbjct: 58 VEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGK 117
Query: 68 PFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAAE 127
G + PHVFAIAD A+R+M S SI+VSGESGAGKTE TK ++RYL +
Sbjct: 118 SLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT----ESYGT 173
Query: 128 GRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLERSR 187
G+ ++ +++E+NP+LEAFGNAKTV+NNNSSRFGKFVEI F+++ + G + YLLE+SR
Sbjct: 174 GQDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSR 233
Query: 188 VCKISDPERNYHCFYLLCAAPPDEI-ERYKLGNPTSFHYLN------------------- 227
+C ERNYH FY LCA ++I ER L +P +F YLN
Sbjct: 234 ICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQN 293
Query: 228 -QSNCYELVG------VNDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEK 280
+S Y G ++D D++ AM IG+ +E+ +F VVA +LHLGNI+FE+
Sbjct: 294 RKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEE 353
Query: 281 -GEEDSSVVKDNESKFHLQMTAKLLMCDPGELEDALCKRVMITPE-----EIIKKSLDPV 334
G N+S L+ A+LL D +L +L RVM+T +IK L
Sbjct: 354 AGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVE 413
Query: 335 AATVSRDGLAKTIYSRLFDWLVDKINVSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCI 394
A +RD LAKT+YS LFD +V+++N + S IGVLDI G QFCI
Sbjct: 414 QANNARDALAKTVYSHLFDHVVNRVNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCI 472
Query: 395 NFTNEKLQQHFNQNVFKMEQNDYRNEEIDWSYVHFVDNQDVLDLIEKKPGGIIALLDEAC 454
N+ NEKLQQ FN+ + K EQ Y+ E + + VH+VDNQD +DLIE + GI+ +LDE
Sbjct: 473 NYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEEN 532
Query: 455 MFPKSTHENFSQKLYQTFKDHKRFIKPKLT--------RSD--FTIVHYAGEVHYQSDLF 504
P+ + ++F+ ++Q KDH R P+ + R D F I H+AG V Y++ F
Sbjct: 533 RLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQF 592
Query: 505 LDKNKDYVVAEHQDLLSASECSFVSGLFPPXXXXXXXXXXXX------XXGSRFKLQLQQ 558
++KN D + + L+ S F+ LF G++FK QL
Sbjct: 593 VEKNNDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNL 652
Query: 559 LMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSE 618
L+D L ST +IRC+KPN ++ + ++ QL+ G++ + + G+P+R +F E
Sbjct: 653 LLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHE 712
Query: 619 FLDRFGILLPEIRKQNYDEKIACKWILEKMDLK--GYQIGKTKVFLKAGQMAELDAKRAK 676
+ + +P+ + D ++ CK + + + L Y+ G TKVF + G+ AE D
Sbjct: 713 LYNMYKKYMPD-KLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKS 771
Query: 677 LLGHSAEVIQ 686
H AE+++
Sbjct: 772 DPDHLAELVK 781
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
pdb|4E7S|B Chain B, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
Length = 798
Score = 463 bits (1192), Expect = e-130, Method: Compositional matrix adjust.
Identities = 273/730 (37%), Positives = 402/730 (55%), Gaps = 57/730 (7%)
Query: 8 ADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGV 67
+D L YL+E +LHN+ RY + IYTY NILIA+NP+ + +Y + ++ Y+G
Sbjct: 68 VEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGK 127
Query: 68 PFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAAE 127
G + PHVFAIAD A+R+M S SI+VSGESGAGKTE TK ++RYL +
Sbjct: 128 SLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT----ESYGT 183
Query: 128 GRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLERSR 187
G+ ++ +++E+NP+LEAFGNAKTV+NNNSSRFGKFVEI F+++ + G + YLLE+SR
Sbjct: 184 GQDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSR 243
Query: 188 VCKISDPERNYHCFYLLCAAPPDEI-ERYKLGNPTSFHYLN------------------- 227
+C ERNYH FY LCA ++I ER L +P +F YLN
Sbjct: 244 ICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQN 303
Query: 228 -QSNCYELVG------VNDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEK 280
+S Y G ++D D++ AM IG+ +E+ +F VVA +LHLGNI+FE+
Sbjct: 304 RKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEE 363
Query: 281 -GEEDSSVVKDNESKFHLQMTAKLLMCDPGELEDALCKRVMITPE-----EIIKKSLDPV 334
G N+S L+ A+LL D +L +L RVM+T +IK L
Sbjct: 364 AGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVE 423
Query: 335 AATVSRDGLAKTIYSRLFDWLVDKINVSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCI 394
A +RD LAKT+YS LFD +V+++N + S IGVLDI G QFCI
Sbjct: 424 QANNARDALAKTVYSHLFDHVVNRVNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCI 482
Query: 395 NFTNEKLQQHFNQNVFKMEQNDYRNEEIDWSYVHFVDNQDVLDLIEKKPGGIIALLDEAC 454
N+ NEKLQQ FN+ + K EQ Y+ E + + VH+VDNQD +DLIE + GI+ +LDE
Sbjct: 483 NYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEEN 542
Query: 455 MFPKSTHENFSQKLYQTFKDHKRFIKPKLT--------RSD--FTIVHYAGEVHYQSDLF 504
P+ + ++F+ ++Q KDH R P+ + R D F I H+AG V Y++ F
Sbjct: 543 RLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHENIRDDEGFIIRHFAGAVCYETTQF 602
Query: 505 LDKNKDYVVAEHQDLLSASECSFVSGLFPPXXXXXXXXXXXX------XXGSRFKLQLQQ 558
++KN D + + L+ S F+ LF G++FK QL
Sbjct: 603 VEKNNDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNL 662
Query: 559 LMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSE 618
L+D L ST +IRC+KPN ++ + ++ QL+ G++ + + G+P+R +F E
Sbjct: 663 LLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHE 722
Query: 619 FLDRFGILLPEIRKQNYDEKIACKWILEKMDLK--GYQIGKTKVFLKAGQMAELDAKRAK 676
+ + +P+ + D ++ CK + + + L Y+ G TKVF + G+ AE D
Sbjct: 723 LYNMYKKYMPD-KLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKS 781
Query: 677 LLGHSAEVIQ 686
H AE+++
Sbjct: 782 DPDHLAELVK 791
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4)
Length = 784
Score = 463 bits (1192), Expect = e-130, Method: Compositional matrix adjust.
Identities = 273/730 (37%), Positives = 402/730 (55%), Gaps = 57/730 (7%)
Query: 8 ADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGV 67
+D L YL+E +LHN+ RY + IYTY NILIA+NP+ + +Y + ++ Y+G
Sbjct: 55 VEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGK 114
Query: 68 PFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAAE 127
G + PHVFAIAD A+R+M S SI+VSGESGAGKTE TK ++RYL +
Sbjct: 115 SLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT----ESYGT 170
Query: 128 GRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLERSR 187
G+ ++ +++E+NP+LEAFGNAKTV+NNNSSRFGKFVEI F+++ + G + YLLE+SR
Sbjct: 171 GQDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSR 230
Query: 188 VCKISDPERNYHCFYLLCAAPPDEI-ERYKLGNPTSFHYLN------------------- 227
+C ERNYH FY LCA ++I ER L +P +F YLN
Sbjct: 231 ICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQN 290
Query: 228 -QSNCYELVG------VNDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEK 280
+S Y G ++D D++ AM IG+ +E+ +F VVA +LHLGNI+FE+
Sbjct: 291 RKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEE 350
Query: 281 -GEEDSSVVKDNESKFHLQMTAKLLMCDPGELEDALCKRVMITPE-----EIIKKSLDPV 334
G N+S L+ A+LL D +L +L RVM+T +IK L
Sbjct: 351 AGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVE 410
Query: 335 AATVSRDGLAKTIYSRLFDWLVDKINVSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCI 394
A +RD LAKT+YS LFD +V+++N + S IGVLDI G QFCI
Sbjct: 411 QANNARDALAKTVYSHLFDHVVNRVNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCI 469
Query: 395 NFTNEKLQQHFNQNVFKMEQNDYRNEEIDWSYVHFVDNQDVLDLIEKKPGGIIALLDEAC 454
N+ NEKLQQ FN+ + K EQ Y+ E + + VH+VDNQD +DLIE + GI+ +LDE
Sbjct: 470 NYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEEN 529
Query: 455 MFPKSTHENFSQKLYQTFKDHKRFIKPKLT--------RSD--FTIVHYAGEVHYQSDLF 504
P+ + ++F+ ++Q KDH R P+ + R D F I H+AG V Y++ F
Sbjct: 530 RLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQF 589
Query: 505 LDKNKDYVVAEHQDLLSASECSFVSGLFPPXXXXXXXXXXXX------XXGSRFKLQLQQ 558
++KN D + + L+ S F+ LF G++FK QL
Sbjct: 590 VEKNNDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNL 649
Query: 559 LMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSE 618
L+D L ST +IRC+KPN ++ + ++ QL+ G++ + + G+P+R +F E
Sbjct: 650 LLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHE 709
Query: 619 FLDRFGILLPEIRKQNYDEKIACKWILEKMDLK--GYQIGKTKVFLKAGQMAELDAKRAK 676
+ + +P+ + D ++ CK + + + L Y+ G TKVF + G+ AE D
Sbjct: 710 LYNMYKKYMPD-KLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKS 768
Query: 677 LLGHSAEVIQ 686
H AE+++
Sbjct: 769 DPDHLAELVK 778
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
pdb|4E7Z|B Chain B, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
Length = 798
Score = 463 bits (1192), Expect = e-130, Method: Compositional matrix adjust.
Identities = 273/730 (37%), Positives = 402/730 (55%), Gaps = 57/730 (7%)
Query: 8 ADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGV 67
+D L YL+E +LHN+ RY + IYTY NILIA+NP+ + +Y + ++ Y+G
Sbjct: 68 VEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGK 127
Query: 68 PFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAAE 127
G + PHVFAIAD A+R+M S SI+VSGESGAGKTE TK ++RYL +
Sbjct: 128 SLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT----ESYGT 183
Query: 128 GRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLERSR 187
G+ ++ +++E+NP+LEAFGNAKTV+NNNSSRFGKFVEI F+++ + G + YLLE+SR
Sbjct: 184 GQDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSR 243
Query: 188 VCKISDPERNYHCFYLLCAAPPDEI-ERYKLGNPTSFHYLN------------------- 227
+C ERNYH FY LCA ++I ER L +P +F YLN
Sbjct: 244 ICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQN 303
Query: 228 -QSNCYELVG------VNDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEK 280
+S Y G ++D D++ AM IG+ +E+ +F VVA +LHLGNI+FE+
Sbjct: 304 RKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEE 363
Query: 281 -GEEDSSVVKDNESKFHLQMTAKLLMCDPGELEDALCKRVMITPE-----EIIKKSLDPV 334
G N+S L+ A+LL D +L +L RVM+T +IK L
Sbjct: 364 AGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVE 423
Query: 335 AATVSRDGLAKTIYSRLFDWLVDKINVSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCI 394
A +RD LAKT+YS LFD +V+++N + S IGVLDI G QFCI
Sbjct: 424 QANNARDALAKTVYSHLFDHVVNRVNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCI 482
Query: 395 NFTNEKLQQHFNQNVFKMEQNDYRNEEIDWSYVHFVDNQDVLDLIEKKPGGIIALLDEAC 454
N+ NEKLQQ FN+ + K EQ Y+ E + + VH+VDNQD +DLIE + GI+ +LDE
Sbjct: 483 NYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEEN 542
Query: 455 MFPKSTHENFSQKLYQTFKDHKRFIKPKLT--------RSD--FTIVHYAGEVHYQSDLF 504
P+ + ++F+ ++Q KDH R P+ + R D F I H+AG V Y++ F
Sbjct: 543 RLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQF 602
Query: 505 LDKNKDYVVAEHQDLLSASECSFVSGLFPPXXXXXXXXXXXX------XXGSRFKLQLQQ 558
++KN D + + L+ S F+ LF G++FK QL
Sbjct: 603 VEKNNDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNL 662
Query: 559 LMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSE 618
L+D L ST +IRC+KPN ++ + ++ QL+ G++ + + G+P+R +F E
Sbjct: 663 LLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHE 722
Query: 619 FLDRFGILLPEIRKQNYDEKIACKWILEKMDLK--GYQIGKTKVFLKAGQMAELDAKRAK 676
+ + +P+ + D ++ CK + + + L Y+ G TKVF + G+ AE D
Sbjct: 723 LYNMYKKYMPD-KLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKS 781
Query: 677 LLGHSAEVIQ 686
H AE+++
Sbjct: 782 DPDHLAELVK 791
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation
pdb|1KK8|A Chain A, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 837
Score = 463 bits (1192), Expect = e-130, Method: Compositional matrix adjust.
Identities = 276/743 (37%), Positives = 415/743 (55%), Gaps = 38/743 (5%)
Query: 9 DDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGVP 68
+DM ++YL+E VL+NL +RY IYTY+G IA+NP++ L +Y ++ +Y+G
Sbjct: 86 EDMANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKR 144
Query: 69 FGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLG------- 121
++ PH+F++AD AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA +
Sbjct: 145 KTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKD 204
Query: 122 --GHTAAEGRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIR 179
EG S+E Q++++NPVLEA+GNAKT +NNNSSRFGKF+ I F G+I+GA I
Sbjct: 205 EEASDKKEG-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIE 263
Query: 180 TYLLERSRVCKISDPERNYHCFYLLCAAPPDEIERYKLGNPTS--FHYLNQSNCYELVGV 237
TYLLE+SRV ERNYH FY +C+ E+ L P S + ++NQ C + +
Sbjct: 264 TYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNI 322
Query: 238 NDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHL 297
+D ++ A D++G +++E+ ++F A+ILH+G ++F++ + D ++
Sbjct: 323 DDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAE--A 380
Query: 298 QMTAKLLMCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVD 357
+ A L + G+L AL K + E++ K + S LAK++Y R+F+WLV
Sbjct: 381 EKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVR 440
Query: 358 KINVSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDY 417
++N ++ IGVLDI G Q CIN+TNE+LQQ FN ++F +EQ +Y
Sbjct: 441 RVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEY 500
Query: 418 RNEEIDWSYVHF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLYQTFKDHK 476
+ E I W ++ F +D Q +DLIE KP GI+++L+E CMFPK+ ++F KLYQ
Sbjct: 501 KKEGIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKN 559
Query: 477 R-FIKP-KLTRSD-----FTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVS 529
R F KP K TR + F + HYAG V Y +L+KNKD + LL AS+ V+
Sbjct: 560 RMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVA 619
Query: 530 GLFPPXXXXXXXXXXXXXXGSRFKL-------QLQQLMDTLNSTEPHYIRCVKPNNELKP 582
LF S F+ L +LM L ST PH++RC+ PN +P
Sbjct: 620 ELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQP 679
Query: 583 VILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNY-DEKIAC 641
++D+ V+ QL+ GVLE IR+ G+P+R +SEF R+ IL P Q + D K
Sbjct: 680 GLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVS 739
Query: 642 KWILE--KMDLKGYQIGKTKVFLKAGQMAELDAKRAKLLGHSAEVIQSQHRRRVTQKHYI 699
+ IL +MD Y++G TKVF KAG + L+ R + L + Q+ R + +K Y
Sbjct: 740 EKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYK 799
Query: 700 TLVQAAV---CIQSSCRGILARR 719
L + IQ + R L R
Sbjct: 800 KLQDQRIGLSVIQRNIRKWLVLR 822
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|A Chain A, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|A Chain A, Structure Of Nucleotide-free Scallop Myosin S1
Length = 840
Score = 463 bits (1191), Expect = e-130, Method: Compositional matrix adjust.
Identities = 276/743 (37%), Positives = 415/743 (55%), Gaps = 38/743 (5%)
Query: 9 DDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGVP 68
+DM ++YL+E VL+NL +RY IYTY+G IA+NP++ L +Y ++ +Y+G
Sbjct: 86 EDMANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKR 144
Query: 69 FGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLG------- 121
++ PH+F++AD AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA +
Sbjct: 145 KTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKD 204
Query: 122 --GHTAAEGRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIR 179
EG S+E Q++++NPVLEA+GNAKT +NNNSSRFGKF+ I F G+I+GA I
Sbjct: 205 EEASDKKEG-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIE 263
Query: 180 TYLLERSRVCKISDPERNYHCFYLLCAAPPDEIERYKLGNPTS--FHYLNQSNCYELVGV 237
TYLLE+SRV ERNYH FY +C+ E+ L P S + ++NQ C + +
Sbjct: 264 TYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNI 322
Query: 238 NDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHL 297
+D ++ A D++G +++E+ ++F A+ILH+G ++F++ + D ++
Sbjct: 323 DDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAE--A 380
Query: 298 QMTAKLLMCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVD 357
+ A L + G+L AL K + E++ K + S LAK++Y R+F+WLV
Sbjct: 381 EKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVR 440
Query: 358 KINVSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDY 417
++N ++ IGVLDI G Q CIN+TNE+LQQ FN ++F +EQ +Y
Sbjct: 441 RVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEY 500
Query: 418 RNEEIDWSYVHF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLYQTFKDHK 476
+ E I W ++ F +D Q +DLIE KP GI+++L+E CMFPK+ ++F KLYQ
Sbjct: 501 KKEGIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKN 559
Query: 477 R-FIKP-KLTRSD-----FTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVS 529
R F KP K TR + F + HYAG V Y +L+KNKD + LL AS+ V+
Sbjct: 560 RMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVA 619
Query: 530 GLFPPXXXXXXXXXXXXXXGSRFKL-------QLQQLMDTLNSTEPHYIRCVKPNNELKP 582
LF S F+ L +LM L ST PH++RC+ PN +P
Sbjct: 620 ELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQP 679
Query: 583 VILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNY-DEKIAC 641
++D+ V+ QL+ GVLE IR+ G+P+R +SEF R+ IL P Q + D K
Sbjct: 680 GLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVS 739
Query: 642 KWILE--KMDLKGYQIGKTKVFLKAGQMAELDAKRAKLLGHSAEVIQSQHRRRVTQKHYI 699
+ IL +MD Y++G TKVF KAG + L+ R + L + Q+ R + +K Y
Sbjct: 740 EKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYK 799
Query: 700 TLVQAAV---CIQSSCRGILARR 719
L + IQ + R L R
Sbjct: 800 KLQDQRIGLSVIQRNIRKWLVLR 822
>pdb|1B7T|A Chain A, Myosin Digested By Papain
pdb|1L2O|A Chain A, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|A Chain A, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|A Chain A, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
Length = 835
Score = 463 bits (1191), Expect = e-130, Method: Compositional matrix adjust.
Identities = 276/743 (37%), Positives = 415/743 (55%), Gaps = 38/743 (5%)
Query: 9 DDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGVP 68
+DM ++YL+E VL+NL +RY IYTY+G IA+NP++ L +Y ++ +Y+G
Sbjct: 86 EDMANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKR 144
Query: 69 FGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLG------- 121
++ PH+F++AD AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA +
Sbjct: 145 KTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKD 204
Query: 122 --GHTAAEGRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIR 179
EG S+E Q++++NPVLEA+GNAKT +NNNSSRFGKF+ I F G+I+GA I
Sbjct: 205 EEASDKKEG-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIE 263
Query: 180 TYLLERSRVCKISDPERNYHCFYLLCAAPPDEIERYKLGNPTS--FHYLNQSNCYELVGV 237
TYLLE+SRV ERNYH FY +C+ E+ L P S + ++NQ C + +
Sbjct: 264 TYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNI 322
Query: 238 NDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHL 297
+D ++ A D++G +++E+ ++F A+ILH+G ++F++ + D ++
Sbjct: 323 DDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAE--A 380
Query: 298 QMTAKLLMCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVD 357
+ A L + G+L AL K + E++ K + S LAK++Y R+F+WLV
Sbjct: 381 EKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVR 440
Query: 358 KINVSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDY 417
++N ++ IGVLDI G Q CIN+TNE+LQQ FN ++F +EQ +Y
Sbjct: 441 RVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEY 500
Query: 418 RNEEIDWSYVHF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLYQTFKDHK 476
+ E I W ++ F +D Q +DLIE KP GI+++L+E CMFPK+ ++F KLYQ
Sbjct: 501 KKEGIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKN 559
Query: 477 R-FIKP-KLTRSD-----FTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVS 529
R F KP K TR + F + HYAG V Y +L+KNKD + LL AS+ V+
Sbjct: 560 RMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVA 619
Query: 530 GLFPPXXXXXXXXXXXXXXGSRFKL-------QLQQLMDTLNSTEPHYIRCVKPNNELKP 582
LF S F+ L +LM L ST PH++RC+ PN +P
Sbjct: 620 ELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQP 679
Query: 583 VILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNY-DEKIAC 641
++D+ V+ QL+ GVLE IR+ G+P+R +SEF R+ IL P Q + D K
Sbjct: 680 GLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVS 739
Query: 642 KWILE--KMDLKGYQIGKTKVFLKAGQMAELDAKRAKLLGHSAEVIQSQHRRRVTQKHYI 699
+ IL +MD Y++G TKVF KAG + L+ R + L + Q+ R + +K Y
Sbjct: 740 EKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYK 799
Query: 700 TLVQAAV---CIQSSCRGILARR 719
L + IQ + R L R
Sbjct: 800 KLQDQRIGLSVIQRNIRKWLVLR 822
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State
Length = 830
Score = 463 bits (1191), Expect = e-130, Method: Compositional matrix adjust.
Identities = 276/743 (37%), Positives = 415/743 (55%), Gaps = 38/743 (5%)
Query: 9 DDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGVP 68
+DM ++YL+E VL+NL +RY IYTY+G IA+NP++ L +Y ++ +Y+G
Sbjct: 81 EDMANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKR 139
Query: 69 FGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLG------- 121
++ PH+F++AD AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA +
Sbjct: 140 KTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKD 199
Query: 122 --GHTAAEGRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIR 179
EG S+E Q++++NPVLEA+GNAKT +NNNSSRFGKF+ I F G+I+GA I
Sbjct: 200 EEASDKKEG-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIE 258
Query: 180 TYLLERSRVCKISDPERNYHCFYLLCAAPPDEIERYKLGNPTS--FHYLNQSNCYELVGV 237
TYLLE+SRV ERNYH FY +C+ E+ L P S + ++NQ C + +
Sbjct: 259 TYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNI 317
Query: 238 NDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHL 297
+D ++ A D++G +++E+ ++F A+ILH+G ++F++ + D ++
Sbjct: 318 DDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAE--A 375
Query: 298 QMTAKLLMCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVD 357
+ A L + G+L AL K + E++ K + S LAK++Y R+F+WLV
Sbjct: 376 EKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVR 435
Query: 358 KINVSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDY 417
++N ++ IGVLDI G Q CIN+TNE+LQQ FN ++F +EQ +Y
Sbjct: 436 RVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEY 495
Query: 418 RNEEIDWSYVHF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLYQTFKDHK 476
+ E I W ++ F +D Q +DLIE KP GI+++L+E CMFPK+ ++F KLYQ
Sbjct: 496 KKEGIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKN 554
Query: 477 R-FIKP-KLTRSD-----FTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVS 529
R F KP K TR + F + HYAG V Y +L+KNKD + LL AS+ V+
Sbjct: 555 RMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVA 614
Query: 530 GLFPPXXXXXXXXXXXXXXGSRFKL-------QLQQLMDTLNSTEPHYIRCVKPNNELKP 582
LF S F+ L +LM L ST PH++RC+ PN +P
Sbjct: 615 ELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQP 674
Query: 583 VILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNY-DEKIAC 641
++D+ V+ QL+ GVLE IR+ G+P+R +SEF R+ IL P Q + D K
Sbjct: 675 GLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVS 734
Query: 642 KWILE--KMDLKGYQIGKTKVFLKAGQMAELDAKRAKLLGHSAEVIQSQHRRRVTQKHYI 699
+ IL +MD Y++G TKVF KAG + L+ R + L + Q+ R + +K Y
Sbjct: 735 EKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYK 794
Query: 700 TLVQAAV---CIQSSCRGILARR 719
L + IQ + R L R
Sbjct: 795 KLQDQRIGLSVIQRNIRKWLVLR 817
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|B Chain B, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|2W4T|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 831
Score = 463 bits (1191), Expect = e-130, Method: Compositional matrix adjust.
Identities = 276/743 (37%), Positives = 415/743 (55%), Gaps = 38/743 (5%)
Query: 9 DDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGVP 68
+DM ++YL+E VL+NL +RY IYTY+G IA+NP++ L +Y ++ +Y+G
Sbjct: 82 EDMANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKR 140
Query: 69 FGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLG------- 121
++ PH+F++AD AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA +
Sbjct: 141 KTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKD 200
Query: 122 --GHTAAEGRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIR 179
EG S+E Q++++NPVLEA+GNAKT +NNNSSRFGKF+ I F G+I+GA I
Sbjct: 201 EEASDKKEG-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIE 259
Query: 180 TYLLERSRVCKISDPERNYHCFYLLCAAPPDEIERYKLGNPTS--FHYLNQSNCYELVGV 237
TYLLE+SRV ERNYH FY +C+ E+ L P S + ++NQ C + +
Sbjct: 260 TYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNI 318
Query: 238 NDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHL 297
+D ++ A D++G +++E+ ++F A+ILH+G ++F++ + D ++
Sbjct: 319 DDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAE--A 376
Query: 298 QMTAKLLMCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVD 357
+ A L + G+L AL K + E++ K + S LAK++Y R+F+WLV
Sbjct: 377 EKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVR 436
Query: 358 KINVSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDY 417
++N ++ IGVLDI G Q CIN+TNE+LQQ FN ++F +EQ +Y
Sbjct: 437 RVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEY 496
Query: 418 RNEEIDWSYVHF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLYQTFKDHK 476
+ E I W ++ F +D Q +DLIE KP GI+++L+E CMFPK+ ++F KLYQ
Sbjct: 497 KKEGIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKN 555
Query: 477 R-FIKP-KLTRSD-----FTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVS 529
R F KP K TR + F + HYAG V Y +L+KNKD + LL AS+ V+
Sbjct: 556 RMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVA 615
Query: 530 GLFPPXXXXXXXXXXXXXXGSRFKL-------QLQQLMDTLNSTEPHYIRCVKPNNELKP 582
LF S F+ L +LM L ST PH++RC+ PN +P
Sbjct: 616 ELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQP 675
Query: 583 VILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNY-DEKIAC 641
++D+ V+ QL+ GVLE IR+ G+P+R +SEF R+ IL P Q + D K
Sbjct: 676 GLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVS 735
Query: 642 KWILE--KMDLKGYQIGKTKVFLKAGQMAELDAKRAKLLGHSAEVIQSQHRRRVTQKHYI 699
+ IL +MD Y++G TKVF KAG + L+ R + L + Q+ R + +K Y
Sbjct: 736 EKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYK 795
Query: 700 TLVQAAV---CIQSSCRGILARR 719
L + IQ + R L R
Sbjct: 796 KLQDQRIGLSVIQRNIRKWLVLR 818
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
Length = 814
Score = 462 bits (1189), Expect = e-130, Method: Compositional matrix adjust.
Identities = 273/730 (37%), Positives = 401/730 (54%), Gaps = 57/730 (7%)
Query: 8 ADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGV 67
+D L YL+E +LHN+ RY + IYTY NILIA+NP+ + +Y + ++ Y+G
Sbjct: 58 VEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGK 117
Query: 68 PFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAAE 127
G + PHVFAIAD A+R+M S SI+VSGESGAGKTE TK ++RYL +
Sbjct: 118 SLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT----ESYGT 173
Query: 128 GRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLERSR 187
G+ + +++E+NP+LEAFGNAKTV+NNNSSRFGKFVEI F+++ + G + YLLE+SR
Sbjct: 174 GQDIYDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSR 233
Query: 188 VCKISDPERNYHCFYLLCAAPPDEI-ERYKLGNPTSFHYLN------------------- 227
+C ERNYH FY LCA ++I ER L +P +F YLN
Sbjct: 234 ICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQN 293
Query: 228 -QSNCYELVG------VNDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEK 280
+S Y G ++D D++ AM IG+ +E+ +F VVA +LHLGNI+FE+
Sbjct: 294 RKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEE 353
Query: 281 -GEEDSSVVKDNESKFHLQMTAKLLMCDPGELEDALCKRVMITPE-----EIIKKSLDPV 334
G N+S L+ A+LL D +L +L RVM+T +IK L
Sbjct: 354 AGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVE 413
Query: 335 AATVSRDGLAKTIYSRLFDWLVDKINVSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCI 394
A +RD LAKT+YS LFD +V+++N + S IGVLDI G QFCI
Sbjct: 414 QANNARDALAKTVYSHLFDHVVNRVNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCI 472
Query: 395 NFTNEKLQQHFNQNVFKMEQNDYRNEEIDWSYVHFVDNQDVLDLIEKKPGGIIALLDEAC 454
N+ NEKLQQ FN+ + K EQ Y+ E + + VH+VDNQD +DLIE + GI+ +LDE
Sbjct: 473 NYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEEN 532
Query: 455 MFPKSTHENFSQKLYQTFKDHKRFIKPKLT--------RSD--FTIVHYAGEVHYQSDLF 504
P+ + ++F+ ++Q KDH R P+ + R D F I H+AG V Y++ F
Sbjct: 533 RLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQF 592
Query: 505 LDKNKDYVVAEHQDLLSASECSFVSGLFPPXXXXXXXXXXXX------XXGSRFKLQLQQ 558
++KN D + + L+ S F+ LF G++FK QL
Sbjct: 593 VEKNNDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNL 652
Query: 559 LMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSE 618
L+D L ST +IRC+KPN ++ + ++ QL+ G++ + + G+P+R +F E
Sbjct: 653 LLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHE 712
Query: 619 FLDRFGILLPEIRKQNYDEKIACKWILEKMDLK--GYQIGKTKVFLKAGQMAELDAKRAK 676
+ + +P+ + D ++ CK + + + L Y+ G TKVF + G+ AE D
Sbjct: 713 LYNMYKKYMPD-KLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKS 771
Query: 677 LLGHSAEVIQ 686
H AE+++
Sbjct: 772 DPDHLAELVK 781
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
Length = 1052
Score = 462 bits (1189), Expect = e-130, Method: Compositional matrix adjust.
Identities = 273/730 (37%), Positives = 402/730 (55%), Gaps = 57/730 (7%)
Query: 8 ADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGV 67
+D L YL+E +LHN+ RY + IYTY NILIA+NP+ + +Y + ++ Y+G
Sbjct: 59 VEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGK 118
Query: 68 PFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAAE 127
G + PHVFAIAD A+R+M S SI+VSGESGAGKTE TK ++RYL +
Sbjct: 119 SLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT----ESYGT 174
Query: 128 GRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLERSR 187
G+ ++ +++E+NP+LEAFGNAKTV+NNNSSRFGKFVEI F+++ + G + YLLE+SR
Sbjct: 175 GQDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSR 234
Query: 188 VCKISDPERNYHCFYLLCAAPPDEI-ERYKLGNPTSFHYLN------------------- 227
+C ERNYH FY LCA ++I ER L +P +F YLN
Sbjct: 235 ICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQN 294
Query: 228 -QSNCYELVG------VNDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEK 280
+S Y G ++D D++ AM IG+ +E+ +F VVA +LHLGNI+FE+
Sbjct: 295 RKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEE 354
Query: 281 -GEEDSSVVKDNESKFHLQMTAKLLMCDPGELEDALCKRVMITPE-----EIIKKSLDPV 334
G N+S L+ A+LL D +L +L RVM+T +IK L
Sbjct: 355 AGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVE 414
Query: 335 AATVSRDGLAKTIYSRLFDWLVDKINVSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCI 394
A +RD LAKT+YS LFD +V+++N + S IGVLDI G QFCI
Sbjct: 415 QANNARDALAKTVYSHLFDHVVNRVNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCI 473
Query: 395 NFTNEKLQQHFNQNVFKMEQNDYRNEEIDWSYVHFVDNQDVLDLIEKKPGGIIALLDEAC 454
N+ NEKLQQ FN+ + K EQ Y+ E + + VH+VDNQD +DLIE + GI+ +LDE
Sbjct: 474 NYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEEN 533
Query: 455 MFPKSTHENFSQKLYQTFKDHKRFIKPKLT--------RSD--FTIVHYAGEVHYQSDLF 504
P+ + ++F+ ++Q KDH R P+ + R D F I H+AG V Y++ F
Sbjct: 534 RLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQF 593
Query: 505 LDKNKDYVVAEHQDLLSASECSFVSGLFPPXXXXXXXXXXXX------XXGSRFKLQLQQ 558
++KN D + + L+ S F+ LF G++FK QL
Sbjct: 594 VEKNNDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNL 653
Query: 559 LMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSE 618
L+D L ST +IRC+KPN ++ + ++ QL+ G++ + + G+P+R +F E
Sbjct: 654 LLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHE 713
Query: 619 FLDRFGILLPEIRKQNYDEKIACKWILEKMDLK--GYQIGKTKVFLKAGQMAELDAKRAK 676
+ + +P+ + D ++ CK + + + L Y+ G TKVF + G+ AE D
Sbjct: 714 LYNMYKKYMPD-KLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKS 772
Query: 677 LLGHSAEVIQ 686
H AE+++
Sbjct: 773 DPDHLAELVK 782
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State
Length = 786
Score = 462 bits (1188), Expect = e-130, Method: Compositional matrix adjust.
Identities = 273/730 (37%), Positives = 401/730 (54%), Gaps = 57/730 (7%)
Query: 8 ADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGV 67
+D L YL+E +LHN+ RY + IYTY NILIA+NP+ + +Y + ++ Y+G
Sbjct: 56 VEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGK 115
Query: 68 PFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAAE 127
G + PHVFAIAD A+R+M S SI+VSGESGAGKTE TK ++RYL +
Sbjct: 116 SLGTMPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT----ESYGT 171
Query: 128 GRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLERSR 187
G+ + +++E+NP+LEAFGNAKTV+NNNSSRFGKFVEI F+++ + G + YLLE+SR
Sbjct: 172 GQDIYDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSR 231
Query: 188 VCKISDPERNYHCFYLLCAAPPDEI-ERYKLGNPTSFHYLN------------------- 227
+C ERNYH FY LCA ++I ER L +P +F YLN
Sbjct: 232 ICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQN 291
Query: 228 -QSNCYELVG------VNDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEK 280
+S Y G ++D D++ AM IG+ +E+ +F VVA +LHLGNI+FE+
Sbjct: 292 RKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEE 351
Query: 281 -GEEDSSVVKDNESKFHLQMTAKLLMCDPGELEDALCKRVMITPE-----EIIKKSLDPV 334
G N+S L+ A+LL D +L +L RVM+T +IK L
Sbjct: 352 AGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVE 411
Query: 335 AATVSRDGLAKTIYSRLFDWLVDKINVSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCI 394
A +RD LAKT+YS LFD +V+++N + S IGVLDI G QFCI
Sbjct: 412 QANNARDALAKTVYSHLFDHVVNRVNQCFPFET-SSYFIGVLDIAGFEYFEHNSFEQFCI 470
Query: 395 NFTNEKLQQHFNQNVFKMEQNDYRNEEIDWSYVHFVDNQDVLDLIEKKPGGIIALLDEAC 454
N+ NEKLQQ FN+ + K EQ Y+ E + + VH+VDNQD +DLIE + GI+ +LDE
Sbjct: 471 NYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEEN 530
Query: 455 MFPKSTHENFSQKLYQTFKDHKRFIKPKLT--------RSD--FTIVHYAGEVHYQSDLF 504
P+ + ++F+ ++Q KDH R P+ + R D F I H+AG V Y++ F
Sbjct: 531 RLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQF 590
Query: 505 LDKNKDYVVAEHQDLLSASECSFVSGLFPPXXXXXXXXXXXX------XXGSRFKLQLQQ 558
++KN D + + L+ S F+ LF G++FK QL
Sbjct: 591 VEKNNDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNL 650
Query: 559 LMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSE 618
L+D L ST +IRC+KPN ++ + ++ QL+ G++ + + G+P+R +F E
Sbjct: 651 LLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHE 710
Query: 619 FLDRFGILLPEIRKQNYDEKIACKWILEKMDLK--GYQIGKTKVFLKAGQMAELDAKRAK 676
+ + +P+ + D ++ CK + + + L Y+ G TKVF + G+ AE D
Sbjct: 711 LYNMYKKYMPD-KLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKS 769
Query: 677 LLGHSAEVIQ 686
H AE+++
Sbjct: 770 DPDHLAELVK 779
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 840
Score = 455 bits (1170), Expect = e-128, Method: Compositional matrix adjust.
Identities = 273/744 (36%), Positives = 413/744 (55%), Gaps = 38/744 (5%)
Query: 9 DDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGVP 68
+DM ++YL+E VL+NL RY IYTY+G IA+NP++ L +Y ++ +Y+G
Sbjct: 86 EDMANMTYLNEASVLNNLRGRYTAGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKR 144
Query: 69 FGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAAE- 127
++ PH+F++AD AY+ M+ + ++ S L++GESGAGKTE+TK ++ Y A + + +
Sbjct: 145 KTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTESTKKVIMYFARVAANLYKQK 204
Query: 128 --------GRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIR 179
++E Q++E+NPVLEAFGNAKTV+NNNSSRFGKF+ I F G+I+GA I
Sbjct: 205 EEPVPNLRASNLEDQIIEANPVLEAFGNAKTVRNNNSSRFGKFIRIHFGPTGKIAGADIE 264
Query: 180 TYLLERSRVCKISDPERNYHCFYLLCAAPPDEIERYKLGNPTS--FHYLNQSNCYELVGV 237
TYLLE+SRV ERNYH FY +C+ E+ L P S + ++NQ C + +
Sbjct: 265 TYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNEVMLITPDSGLYSFINQG-CLTVDNI 323
Query: 238 NDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHL 297
+D ++ A D++G +++E+ ++F A+ILH+G ++F++ + D ++
Sbjct: 324 DDVEEFKLCDEAFDILGFTKEEKTSMFKCTASILHMGEMKFKQRPREEQAESDGTAE--A 381
Query: 298 QMTAKLLMCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVD 357
+ A L + G+L AL K + E++ K + S L+K++Y R+F+WLV
Sbjct: 382 EKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNLQQVINSVGALSKSLYDRMFNWLVK 441
Query: 358 KINVSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDY 417
++N ++ IGVLDI G Q CIN+TNE+LQQ FN ++F +EQ +Y
Sbjct: 442 RVNRTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEY 501
Query: 418 RNEEIDWSYVHF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLYQTFKDHK 476
+ E I W ++ F +D Q +DLIE KP GI+++L+E CMFPK+ ++F YQ
Sbjct: 502 KKEGIQWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDYSYQNHIGKN 560
Query: 477 R-FIKP-KLTRSD-----FTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVS 529
R F KP K TR + F + HYAG V Y +LDKNKD + LL+ S+ V+
Sbjct: 561 RMFTKPGKPTRPNQGHAHFELHHYAGNVPYSIAGWLDKNKDPINENVVSLLAVSKEPLVA 620
Query: 530 GLF-PPXXXXXXXXXXXXXXGSRFKL-------QLQQLMDTLNSTEPHYIRCVKPNNELK 581
LF P S F+ L +LM L T PH++RC+ PN E
Sbjct: 621 ELFRAPDEPAGGAGGKKKKKSSAFQTISAVHRESLNKLMCNLRRTNPHFVRCIIPNLEKD 680
Query: 582 PVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNY-DEKIA 640
P ++D+ V+ QL+ GVLE IR+ G+P+R +SEF R+ IL P Q + D K
Sbjct: 681 PGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTV 740
Query: 641 CKWILE--KMDLKGYQIGKTKVFLKAGQMAELDAKRAKLLGHSAEVIQSQHRRRVTQKHY 698
+ IL +MD Y++G TKVF KAG + L+ R + L + Q+ R + +K Y
Sbjct: 741 SEKILTGLQMDPSEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAY 800
Query: 699 ITLVQAAV---CIQSSCRGILARR 719
L + IQ + R L R
Sbjct: 801 KKLQDQRIGLSVIQRNIRKWLVLR 824
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|A Chain A, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|A Chain A, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|A Chain A, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 839
Score = 453 bits (1165), Expect = e-127, Method: Compositional matrix adjust.
Identities = 272/745 (36%), Positives = 412/745 (55%), Gaps = 42/745 (5%)
Query: 10 DMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGVPF 69
DM L++L+E +LHNL +RYE IYTY+G IA+NP++ L +Y ++++Y+G
Sbjct: 87 DMANLTFLNEASILHNLRSRYESGFIYTYSGLFCIAINPYRRLP-IYTQGLVDKYRGKRR 145
Query: 70 GKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAAEGR 129
++ PH+F+IAD AY+ M+ + ++ S+L++GESGAGKTE TK +++Y A + A +
Sbjct: 146 AEMPPHLFSIADNAYQYMLQDRENQSMLITGESGAGKTENTKKVIQYFALVAASLAGKKD 205
Query: 130 -------------SVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGA 176
++E Q+++ NPVLEA+GNAKT +NNNSSRFGKF+ I F +G+I+GA
Sbjct: 206 KKEEEKKKDEKKGTLEDQIVQCNPVLEAYGNAKTTRNNNSSRFGKFIRIHFGTQGKIAGA 265
Query: 177 AIRTYLLERSRVCKISDPERNYHCFY-LLCAAPPDEIER-YKLGNPTSFHYLNQSNCYEL 234
I TYLLE+SRV ERNYH FY LL A P+ IE+ + +P + ++NQ +
Sbjct: 266 DIETYLLEKSRVTYQQSAERNYHIFYQLLSPAFPENIEKILAVPDPGLYGFINQGTL-TV 324
Query: 235 VGVNDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESK 294
G++D + T A DV+G + +E+ +++ ILHLG +++++ E + E+
Sbjct: 325 DGIDDEEEMGLTDTAFDVLGFTDEEKLSMYKCTGCILHLGEMKWKQRGEQAEADGTAEA- 383
Query: 295 FHLQMTAKLLMCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDW 354
+ A LL + G+L L K + E + + + T S LAK++Y R+F+W
Sbjct: 384 ---EKVAFLLGVNAGDLLKCLLKPKIKVGTEYVTQGRNKDQVTNSIAALAKSLYDRMFNW 440
Query: 355 LVDKINVSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQ 414
LV ++N ++ + IGVLDI G Q CIN+TNE+LQQ FN ++F +EQ
Sbjct: 441 LVRRVNQTLDTKAKRQFFIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQ 500
Query: 415 NDYRNEEIDWSYVHF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLYQT-F 472
+Y+ E I W ++ F +D Q ++LIE KP GI+++L+E CMFPK++ +F KLY
Sbjct: 501 EEYKKEGIVWEFIDFGLDLQACIELIE-KPMGILSILEEECMFPKASDTSFKNKLYDNHL 559
Query: 473 KDHKRFIKPKLTRSD-----FTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSF 527
+ F KPK ++ F + HYAG V Y +LDKNKD + +LL S+
Sbjct: 560 GKNPMFGKPKPPKAGCAEAHFCLHHYAGSVSYSIAGWLDKNKDPINENVVELLQNSKEPI 619
Query: 528 VSGLFPPXXXXXXXXXXXXXXGSRF-------KLQLQQLMDTLNSTEPHYIRCVKPNNEL 580
V LF P + F K L +LM L ST PH++RC+ PN
Sbjct: 620 VKMLFTPPRILTPGGKKKKGKSAAFQTISSVHKESLNKLMKNLYSTHPHFVRCIIPNELK 679
Query: 581 KPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNY-DEKI 639
P ++D+ V+ QLR GVLE IR+ G+P R +SEF R+ IL P + D K+
Sbjct: 680 TPGLIDAALVLHQLRCNGVLEGIRICRKGFPNRIIYSEFKQRYSILAPNAVPSGFADGKV 739
Query: 640 ACKWILE--KMDLKGYQIGKTKVFLKAGQMAELDAKRAKLLGHSAEVIQSQHRRRVTQKH 697
L ++D Y++G TKVF KAG + L+ R + L + Q+ R + +K
Sbjct: 740 VTDKALSALQLDPNEYRLGNTKVFFKAGVLGMLEDMRDERLSKIISMFQAHIRGYLMRKA 799
Query: 698 YITLVQAAV---CIQSSCRGILARR 719
Y L + IQ + R L R
Sbjct: 800 YKKLQDQRIGLTLIQRNVRKWLVLR 824
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii
Length = 838
Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust.
Identities = 274/745 (36%), Positives = 414/745 (55%), Gaps = 39/745 (5%)
Query: 9 DDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGVP 68
+DM ++YL+E VL+NL RY IYTY+G IA+NP++ L +Y ++ +Y+G
Sbjct: 86 EDMANMTYLNEASVLNNLRGRYTAGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKR 144
Query: 69 FGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLG----GHT 124
++ PH+F++AD AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA + T
Sbjct: 145 KTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKT 204
Query: 125 AAEGR------SVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAI 178
+ E S+E Q++++NPVLEA+GNAKT +NNNSSRFGKF+ I F G+I+GA I
Sbjct: 205 SEEEEADQKKGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADI 264
Query: 179 RTYLLERSRVCKISDPERNYHCFYLLCAAPPDEIERYKLGNPTS--FHYLNQSNCYELVG 236
TYLLE+SRV ERNYH FY +C+ E+ L P S + ++NQ C +
Sbjct: 265 ETYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNEVMLITPDSGLYSFINQG-CLTVDN 323
Query: 237 VNDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFH 296
++D ++ A D++G +++E+ ++F A+ILH+G ++F++ + D ++
Sbjct: 324 IDDVEEFKLCDEAFDILGFTKEEKTSMFKCTASILHMGEMKFKQRPREEQAESDGTAE-- 381
Query: 297 LQMTAKLLMCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLV 356
+ A L + G+L AL K + E++ K + S L+K++Y R+F+WLV
Sbjct: 382 AEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNLQQVINSVGALSKSLYDRMFNWLV 441
Query: 357 DKINVSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQND 416
++N ++ IGVLDI G Q CIN+TNE+LQQ FN ++F +EQ +
Sbjct: 442 KRVNRTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEE 501
Query: 417 YRNEEIDWSYVHF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLYQTFKDH 475
Y+ E I W ++ F +D Q +DLIE KP GI+++L+E CMFPK+ ++F YQ
Sbjct: 502 YKKEGIQWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDYSYQNHIGK 560
Query: 476 KR-FIKP-KLTRSD-----FTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFV 528
R F KP K TR + F + HYAG V Y +LDKNKD + LL+ S+ V
Sbjct: 561 NRMFTKPGKPTRPNQGHAHFELHHYAGNVPYSIAGWLDKNKDPINENVVSLLAVSKEPLV 620
Query: 529 SGLF-PPXXXXXXXXXXXXXXGSRFKL-------QLQQLMDTLNSTEPHYIRCVKPNNEL 580
+ LF P S F+ L +LM L ST PH++RC+ PN
Sbjct: 621 AELFRAPDEPAGGAGGKKKKKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELK 680
Query: 581 KPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNY-DEKI 639
+P ++D+ V+ QL+ GVLE IR+ G+P+R +SEF R+ IL P Q + D K
Sbjct: 681 QPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKT 740
Query: 640 ACKWILE--KMDLKGYQIGKTKVFLKAGQMAELDAKRAKLLGHSAEVIQSQHRRRVTQKH 697
+ IL +MD Y++G TKVF KAG + L+ R + L + Q+ R + +K
Sbjct: 741 VSEKILTGLQMDPSEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKA 800
Query: 698 YITLVQAAV---CIQSSCRGILARR 719
Y L + IQ + R L R
Sbjct: 801 YKKLQDQRIGLSVIQRNIRKWLVLR 825
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|V Chain V, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 1184
Score = 446 bits (1146), Expect = e-125, Method: Compositional matrix adjust.
Identities = 270/779 (34%), Positives = 415/779 (53%), Gaps = 78/779 (10%)
Query: 9 DDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGVP 68
+DM +L+ L+E VLHNL RY IYTY+G + +NP++ L +Y +++ YKG
Sbjct: 86 EDMAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKK 144
Query: 69 FGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGG-HTAAE 127
++ PH++AIAD AYR M+ + + SIL +GESGAGKTE TK +++YLA + H +
Sbjct: 145 RHEMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKK 204
Query: 128 GRSV-----------EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGA 176
S+ E+Q+L++NP+LEAFGNAKTVKN+NSSRFGKF+ I FD G I GA
Sbjct: 205 DTSITQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGA 264
Query: 177 AIRTYLLERSRVCKISDPERNYHCFYLLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVG 236
I TYLLE+SR + + ER +H FY L A +++ L + + + +
Sbjct: 265 NIETYLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHVPIPA 324
Query: 237 VNDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEE-DSSVVKDNESKF 295
D + T AM ++G + +EQ +I VV+++L LGNI F+K D + + DN
Sbjct: 325 QQDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDN---- 380
Query: 296 HLQMTAKLLMCDPGELEDALCKRVMITP-----EEIIKKSLDPVAATVSRDGLAKTIYSR 350
TA +C + R ++TP ++++K+ A + + LAK + R
Sbjct: 381 ----TAAQKVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFER 436
Query: 351 LFDWLVDKINVSIGQDP-HSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNV 409
LF W++ ++N ++ + +G+LDI G Q CIN+TNEKLQQ FN +
Sbjct: 437 LFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTM 496
Query: 410 FKMEQNDYRNEEIDWSYVHF-VDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHENFSQ 466
F +EQ +Y+ E I+W+++ F +D Q ++LIE+ P G++ALLDE C FPK+T +F +
Sbjct: 497 FILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVE 556
Query: 467 KLYQTFKDHKRFIKPKL--TRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASE 524
KL Q +H +F K K +++F I+HYAG+V Y + +L KN D + LL+ S
Sbjct: 557 KLIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSS 616
Query: 525 CSFVSGLFPPX------------------XXXXXXXXXXXXXGSRFKLQLQQLMDTLNST 566
FV+ L+ G +K QL +LM TL +T
Sbjct: 617 DKFVADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNT 676
Query: 567 EPHYIRCVKPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGIL 626
P+++RC+ PN+E + LD++ V++QLR GVLE IR+ G+P R F EF R+ IL
Sbjct: 677 NPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEIL 736
Query: 627 LPE-IRKQNYDEKIACKWILEKMDLKG--YQIGKTKVFLKAGQMAELDAKRAKLLGHSAE 683
I K D K AC +++ ++L Y+IG++K+F + G +A L+ +R
Sbjct: 737 AANAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERD-------- 788
Query: 684 VIQSQHRRRVTQKHYITLVQAAVCIQSSCRGILARR-YCXXXXXXXXXXXIQKNSRTMM 741
+ + + Q+ CRG LAR+ + IQ N R+ M
Sbjct: 789 ---------------LKITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFM 832
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 971
Score = 442 bits (1136), Expect = e-124, Method: Compositional matrix adjust.
Identities = 268/775 (34%), Positives = 413/775 (53%), Gaps = 78/775 (10%)
Query: 8 ADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGV 67
+DM +L+ L+E VLHNL RY IYTY+G + +NP++ L +Y +++ YKG
Sbjct: 85 VEDMAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGK 143
Query: 68 PFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGG-HTAA 126
++ PH++AIAD AYR M+ + + SIL +GESGAGKTE TK +++YLA + H
Sbjct: 144 KRHEMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGK 203
Query: 127 EGRSV-----------EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISG 175
+ S+ E+Q+L++NP+LEAFGNAKTVKN+NSSRFGKF+ I FD G I G
Sbjct: 204 KDTSITQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVG 263
Query: 176 AAIRTYLLERSRVCKISDPERNYHCFYLLCAAPPDEIERYKLGNPTSFHYLNQSNCYELV 235
A I TYLLE+SR + + ER +H FY L A +++ L + + + +
Sbjct: 264 ANIETYLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHVPIP 323
Query: 236 GVNDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEE-DSSVVKDNESK 294
D + T AM ++G + +EQ +I VV+++L LGNI F+K D + + DN
Sbjct: 324 AQQDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDN--- 380
Query: 295 FHLQMTAKLLMCDPGELEDALCKRVMITP-----EEIIKKSLDPVAATVSRDGLAKTIYS 349
TA +C + R ++TP ++++K+ A + + LAK +
Sbjct: 381 -----TAAQKVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFE 435
Query: 350 RLFDWLVDKINVSIGQDP-HSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQN 408
RLF W++ ++N ++ + +G+LDI G Q CIN+TNEKLQQ FN
Sbjct: 436 RLFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHT 495
Query: 409 VFKMEQNDYRNEEIDWSYVHF-VDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHENFS 465
+F +EQ +Y+ E I+W+++ F +D Q ++LIE+ P G++ALLDE C FPK+T +F
Sbjct: 496 MFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFV 555
Query: 466 QKLYQTFKDHKRFIKPKLT--RSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSAS 523
+KL Q +H +F K K +++F I+HYAG+V Y + +L KN D + LL+ S
Sbjct: 556 EKLIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQS 615
Query: 524 ECSFVSGLFPPX------------------XXXXXXXXXXXXXGSRFKLQLQQLMDTLNS 565
FV+ L+ G +K QL +LM TL +
Sbjct: 616 SDKFVADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRN 675
Query: 566 TEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGI 625
T P+++RC+ PN+E + LD++ V++QLR GVLE IR+ G+P R F EF R+ I
Sbjct: 676 TNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEI 735
Query: 626 LLPE-IRKQNYDEKIACKWILEKMDLKG--YQIGKTKVFLKAGQMAELDAKRAKLLGHSA 682
L I K D K AC +++ ++L Y+IG++K+F + G +A L+ +R
Sbjct: 736 LAANAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERD------- 788
Query: 683 EVIQSQHRRRVTQKHYITLVQAAVCIQSSCRGILARR-YCXXXXXXXXXXXIQKN 736
+ + + Q+ CRG LAR+ + IQ+N
Sbjct: 789 ----------------LKITDVIIAFQAQCRGYLARKAFAKRQQQLTAMKVIQRN 827
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 973
Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust.
Identities = 268/775 (34%), Positives = 413/775 (53%), Gaps = 78/775 (10%)
Query: 8 ADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGV 67
+DM +L+ L+E VLHNL RY IYTY+G + +NP++ L +Y +++ YKG
Sbjct: 85 VEDMAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGK 143
Query: 68 PFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGG-HTAA 126
++ PH++AIAD AYR M+ + + SIL +GESGAGKTE TK +++YLA + H
Sbjct: 144 KRHEMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGK 203
Query: 127 EGRSV-----------EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISG 175
+ S+ E+Q+L++NP+LEAFGNAKTVKN+NSSRFGKF+ I FD G I G
Sbjct: 204 KDTSITQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVG 263
Query: 176 AAIRTYLLERSRVCKISDPERNYHCFYLLCAAPPDEIERYKLGNPTSFHYLNQSNCYELV 235
A I TYLLE+SR + + ER +H FY L A +++ L + + + +
Sbjct: 264 ANIETYLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHVPIP 323
Query: 236 GVNDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEE-DSSVVKDNESK 294
D + T AM ++G + +EQ +I VV+++L LGNI F+K D + + DN
Sbjct: 324 AQQDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDN--- 380
Query: 295 FHLQMTAKLLMCDPGELEDALCKRVMITP-----EEIIKKSLDPVAATVSRDGLAKTIYS 349
TA +C + R ++TP ++++K+ A + + LAK +
Sbjct: 381 -----TAAQKVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFE 435
Query: 350 RLFDWLVDKINVSIGQDP-HSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQN 408
RLF W++ ++N ++ + +G+LDI G Q CIN+TNEKLQQ FN
Sbjct: 436 RLFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHT 495
Query: 409 VFKMEQNDYRNEEIDWSYVHF-VDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHENFS 465
+F +EQ +Y+ E I+W+++ F +D Q ++LIE+ P G++ALLDE C FPK+T +F
Sbjct: 496 MFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFV 555
Query: 466 QKLYQTFKDHKRFIKPKLT--RSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSAS 523
+KL Q +H +F K K +++F I+HYAG+V Y + +L KN D + LL+ S
Sbjct: 556 EKLIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQS 615
Query: 524 ECSFVSGLFPPX------------------XXXXXXXXXXXXXGSRFKLQLQQLMDTLNS 565
FV+ L+ G +K QL +LM TL +
Sbjct: 616 SDKFVADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRN 675
Query: 566 TEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGI 625
T P+++RC+ PN+E + LD++ V++QLR GVLE IR+ G+P R F EF R+ I
Sbjct: 676 TNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEI 735
Query: 626 LLPE-IRKQNYDEKIACKWILEKMDLKG--YQIGKTKVFLKAGQMAELDAKRAKLLGHSA 682
L I K D K AC +++ ++L Y+IG++K+F + G +A L+ +R
Sbjct: 736 LAANAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERD------- 788
Query: 683 EVIQSQHRRRVTQKHYITLVQAAVCIQSSCRGILARR-YCXXXXXXXXXXXIQKN 736
+ + + Q+ CRG LAR+ + IQ+N
Sbjct: 789 ----------------LKITDVIIAFQAQCRGYLARKAFAKRQQQLTAMKVIQRN 827
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|D Chain D, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 909
Score = 441 bits (1133), Expect = e-123, Method: Compositional matrix adjust.
Identities = 268/775 (34%), Positives = 413/775 (53%), Gaps = 78/775 (10%)
Query: 8 ADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGV 67
+DM +L+ L+E VLHNL RY IYTY+G + +NP++ L +Y +++ YKG
Sbjct: 85 VEDMAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGK 143
Query: 68 PFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGG-HTAA 126
++ PH++AIAD AYR M+ + + SIL +GESGAGKTE TK +++YLA + H
Sbjct: 144 KRHEMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGK 203
Query: 127 EGRSV-----------EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISG 175
+ S+ E+Q+L++NP+LEAFGNAKTVKN+NSSRFGKF+ I FD G I G
Sbjct: 204 KDTSITQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVG 263
Query: 176 AAIRTYLLERSRVCKISDPERNYHCFYLLCAAPPDEIERYKLGNPTSFHYLNQSNCYELV 235
A I TYLLE+SR + + ER +H FY L A +++ L + + + +
Sbjct: 264 ANIETYLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHVPIP 323
Query: 236 GVNDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEE-DSSVVKDNESK 294
D + T AM ++G + +EQ +I VV+++L LGNI F+K D + + DN
Sbjct: 324 AQQDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDN--- 380
Query: 295 FHLQMTAKLLMCDPGELEDALCKRVMITP-----EEIIKKSLDPVAATVSRDGLAKTIYS 349
TA +C + R ++TP ++++K+ A + + LAK +
Sbjct: 381 -----TAAQKVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFE 435
Query: 350 RLFDWLVDKINVSIGQDP-HSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQN 408
RLF W++ ++N ++ + +G+LDI G Q CIN+TNEKLQQ FN
Sbjct: 436 RLFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHT 495
Query: 409 VFKMEQNDYRNEEIDWSYVHF-VDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHENFS 465
+F +EQ +Y+ E I+W+++ F +D Q ++LIE+ P G++ALLDE C FPK+T +F
Sbjct: 496 MFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFV 555
Query: 466 QKLYQTFKDHKRFIKPKLT--RSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSAS 523
+KL Q +H +F K K +++F I+HYAG+V Y + +L KN D + LL+ S
Sbjct: 556 EKLIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQS 615
Query: 524 ECSFVSGLFPPX------------------XXXXXXXXXXXXXGSRFKLQLQQLMDTLNS 565
FV+ L+ G +K QL +LM TL +
Sbjct: 616 SDKFVADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRN 675
Query: 566 TEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGI 625
T P+++RC+ PN+E + LD++ V++QLR GVLE IR+ G+P R F EF R+ I
Sbjct: 676 TNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEI 735
Query: 626 LLPE-IRKQNYDEKIACKWILEKMDLKG--YQIGKTKVFLKAGQMAELDAKRAKLLGHSA 682
L I K D K AC +++ ++L Y+IG++K+F + G +A L+ +R
Sbjct: 736 LAANAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERD------- 788
Query: 683 EVIQSQHRRRVTQKHYITLVQAAVCIQSSCRGILARR-YCXXXXXXXXXXXIQKN 736
+ + + Q+ CRG LAR+ + IQ+N
Sbjct: 789 ----------------LKITDVIIAFQAQCRGYLARKAFAKRQQQLTAMKVIQRN 827
>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
Length = 697
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/679 (36%), Positives = 396/679 (58%), Gaps = 21/679 (3%)
Query: 3 SPAGGADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMME 62
+ A G D L+ + E + NL R++ + IYTY G+++I+ NPF+ L ++Y ++
Sbjct: 5 TKAEGVPDFVLLNQITENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNL-NIYKESDIK 63
Query: 63 RYKGVPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGG 122
Y G ++ PH++A+A+ AYR M ++ +++SGESGAGKTE +K IM++L ++
Sbjct: 64 AYNGRYKYEMPPHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVSS 123
Query: 123 HTAAEGRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYL 182
+ + G + + +L+SNP+LEAFGNAKT++N+NSSRFGK++E+QF+ G G I YL
Sbjct: 124 NQSPNGERISKMLLDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYL 183
Query: 183 LERSRVCKISDPERNYHCFY-LLCAAPPDEIERYKLG-NPTSFHYLNQSNCYELVGVNDA 240
LE+SRV + ER++H FY +L +++ L N ++ YL +S C+++ ++D+
Sbjct: 184 LEKSRVVGRTQGERSFHIFYQMLKGLSQSKLDELGLTPNAPAYEYLKKSGCFDVSTIDDS 243
Query: 241 NDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEED---SSVVKDNESKFHL 297
++ +AM+ +G+ +Q++I+ ++AAILH+GNI F + E ++ VK +++K L
Sbjct: 244 GEFKIIVKAMETLGLKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTK-SL 302
Query: 298 QMTAKLLMCDPGELEDALCKRVMITPE----EIIKKSLDPVAATVSRDGLAKTIYSRLFD 353
A L D L ALC R + T E+I +D A SRD LAK +Y RLF+
Sbjct: 303 AAAASCLKTDQQSLSIALCYRSISTGVGKRCEVISVPMDCNQAAYSRDALAKALYERLFN 362
Query: 354 WLVDKINVSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKME 413
WLV KIN I +IG+LDIYG Q INF NEKLQQ F + K E
Sbjct: 363 WLVSKINTIINCTTEKGPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSE 422
Query: 414 QNDYRNEEIDWSYVHFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLYQTFK 473
Q +Y E I+W + + +N+ + +LIEKKP G+I+LLDEAC+ KST + F + + F+
Sbjct: 423 QEEYVREGIEWKNIEYFNNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQFE 482
Query: 474 DH---KRFIKPK---LTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSF 527
+ + ++ K + + F + HYAG+V Y FLDKNKD + + + +S
Sbjct: 483 KNPHLQSYVVSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSDPL 542
Query: 528 VSGLFPPXXXXXXXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDS 587
V GLFPP GS+F+ + L+ TL + PHY+RC+K N+ + ++D
Sbjct: 543 VQGLFPP-TRPEDSKKRPETAGSQFRNAMNALITTLLACSPHYVRCIKSNDNKQAGVIDE 601
Query: 588 NNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQ-NYDEKIACKWILE 646
+ V Q+R G+LE +RV+ AG+ R ++ F +R+ +L + N K A + IL+
Sbjct: 602 DRVRHQVRYLGLLENVRVRRAGFAGRIEYTRFYNRYKMLCKKTWPSFNGTAKQATELILQ 661
Query: 647 K--MDLKGYQIGKTKVFLK 663
+ +D + ++GKTKVF++
Sbjct: 662 QHNIDKEEIRMGKTKVFIR 680
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
Length = 820
Score = 438 bits (1126), Expect = e-122, Method: Compositional matrix adjust.
Identities = 265/757 (35%), Positives = 408/757 (53%), Gaps = 77/757 (10%)
Query: 8 ADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGV 67
+DM +L+ L+E VLHNL RY IYTY+G + +NP++ L +Y +++ YKG
Sbjct: 85 VEDMAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGK 143
Query: 68 PFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGG-HTAA 126
++ PH++AIAD AYR M+ + + SIL +GESGAGKTE TK +++YLA + H
Sbjct: 144 KRHEMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGK 203
Query: 127 EGRSV-----------EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISG 175
+ S+ E+Q+L++NP+LEAFGNAKTVKN+NSSRFGKF+ I FD G I G
Sbjct: 204 KDTSITQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVG 263
Query: 176 AAIRTYLLERSRVCKISDPERNYHCFYLLCAAPPDEIERYKLGNPTSFHYLNQSNCYELV 235
A I TYLLE+SR + + ER +H FY L A +++ L + + + +
Sbjct: 264 ANIETYLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHVPIP 323
Query: 236 GVNDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEE-DSSVVKDNESK 294
D + T AM ++G + +EQ +I VV+++L LGNI F+K D + + DN
Sbjct: 324 AQQDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDN--- 380
Query: 295 FHLQMTAKLLMCDPGELEDALCKRVMITP-----EEIIKKSLDPVAATVSRDGLAKTIYS 349
TA +C + R ++TP ++++K+ A + + LAK +
Sbjct: 381 -----TAAQKVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFE 435
Query: 350 RLFDWLVDKINVSIGQDP-HSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQN 408
RLF W++ ++N ++ + +G+LDI G Q CIN+TNEKLQQ FN
Sbjct: 436 RLFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHT 495
Query: 409 VFKMEQNDYRNEEIDWSYVHF-VDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHENFS 465
+F +EQ +Y+ E I+W+++ F +D Q ++LIE+ P G++ALLDE C FPK+T +F
Sbjct: 496 MFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFV 555
Query: 466 QKLYQTFKDHKRFIKPKLT--RSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSAS 523
+KL Q +H +F K K +++F I+HYAG+V Y + +L KN D + LL+ S
Sbjct: 556 EKLIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQS 615
Query: 524 ECSFVSGLFPPX------------------XXXXXXXXXXXXXGSRFKLQLQQLMDTLNS 565
FV+ L+ G +K QL +LM TL +
Sbjct: 616 SDKFVADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRN 675
Query: 566 TEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGI 625
T P+++RC+ PN+E + LD++ V++QLR GVLE IR+ G+P R F EF R+ I
Sbjct: 676 TNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEI 735
Query: 626 LLPE-IRKQNYDEKIACKWILEKMDLKG--YQIGKTKVFLKAGQMAELDAKRAKLLGHSA 682
L I K D K AC +++ ++L Y+IG++K+F + G +A L+ +R
Sbjct: 736 LAANAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERD------- 788
Query: 683 EVIQSQHRRRVTQKHYITLVQAAVCIQSSCRGILARR 719
+ + + Q+ CRG LAR+
Sbjct: 789 ----------------LKITDVIIAFQAQCRGYLARK 809
>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|B Chain B, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|C Chain C, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|D Chain D, Motor Domain Of Myoe, A Class-I Myosin
Length = 697
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 246/679 (36%), Positives = 395/679 (58%), Gaps = 21/679 (3%)
Query: 3 SPAGGADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMME 62
+ A G D L+ + E + NL R++ + IYTY G+++I+ NPF+ L ++Y ++
Sbjct: 5 TKAEGVPDFVLLNQITENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNL-NIYKESDIK 63
Query: 63 RYKGVPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGG 122
Y G ++ PH++A+A+ AYR M ++ +++SGESGAGKTE +K IM++L ++
Sbjct: 64 AYNGRYKYEMPPHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVSS 123
Query: 123 HTAAEGRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRTYL 182
+ + G + + +L+SNP+LEAFGNAKT++N+NSSRFGK++E+QF+ G G I YL
Sbjct: 124 NQSPNGERISKMLLDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYL 183
Query: 183 LERSRVCKISDPERNYHCFY-LLCAAPPDEIERYKLG-NPTSFHYLNQSNCYELVGVNDA 240
LE+SRV + ER++H FY +L +++ L N ++ YL +S C+++ ++D+
Sbjct: 184 LEKSRVVGRTQGERSFHIFYQMLKGLSQSKLDELGLTPNAPAYEYLKKSGCFDVSTIDDS 243
Query: 241 NDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEED---SSVVKDNESKFHL 297
++ +AM+ +G+ +Q++I+ ++AAILH+GNI F + E ++ VK +++K L
Sbjct: 244 GEFKIIVKAMETLGLKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTK-SL 302
Query: 298 QMTAKLLMCDPGELEDALCKRVMITPE----EIIKKSLDPVAATVSRDGLAKTIYSRLFD 353
A L D L ALC R + T +I +D A SRD LAK +Y RLF+
Sbjct: 303 AAAASCLKTDQQSLSIALCYRSISTGVGKRCSVISVPMDCNQAAYSRDALAKALYERLFN 362
Query: 354 WLVDKINVSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKME 413
WLV KIN I +IG+LDIYG Q INF NEKLQQ F + K E
Sbjct: 363 WLVSKINTIINCTTEKGPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSE 422
Query: 414 QNDYRNEEIDWSYVHFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLYQTFK 473
Q +Y E I+W + + +N+ + +LIEKKP G+I+LLDEAC+ KST + F + + F+
Sbjct: 423 QEEYVREGIEWKNIEYFNNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQFE 482
Query: 474 DH---KRFIKPK---LTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSF 527
+ + ++ K + + F + HYAG+V Y FLDKNKD + + + +S
Sbjct: 483 KNPHLQSYVVSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSDPL 542
Query: 528 VSGLFPPXXXXXXXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDS 587
V GLFPP GS+F+ + L+ TL + PHY+RC+K N+ + ++D
Sbjct: 543 VQGLFPP-TRPEDSKKRPETAGSQFRNAMNALITTLLACSPHYVRCIKSNDNKQAGVIDE 601
Query: 588 NNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQ-NYDEKIACKWILE 646
+ V Q+R G+LE +RV+ AG+ R ++ F +R+ +L + N K A + IL+
Sbjct: 602 DRVRHQVRYLGLLENVRVRRAGFAGRIEYTRFYNRYKMLCKKTWPSFNGTAKQATELILQ 661
Query: 647 K--MDLKGYQIGKTKVFLK 663
+ +D + ++GKTKVF++
Sbjct: 662 QHNIDKEEIRMGKTKVFIR 680
>pdb|2W4A|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 840
Score = 435 bits (1118), Expect = e-121, Method: Compositional matrix adjust.
Identities = 268/752 (35%), Positives = 405/752 (53%), Gaps = 60/752 (7%)
Query: 9 DDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGVP 68
+DM +++LHEP VL+NL RY IYTY+G + +NP++ L +Y+ ++ Y+G
Sbjct: 86 EDMAMMTHLHEPAVLYNLKERYAAWMIYTYSGLFCVTVNPYKWLP-VYNPKVVLAYRGKK 144
Query: 69 FGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLG--GHTAA 126
+ PH+F+I+D AY+ M+ + ++ SIL++GESGAGKT TK +++Y A + G
Sbjct: 145 RQEAPPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFATIAASGEKKK 204
Query: 127 EGRS------VEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRT 180
E +S +E Q++ +NP+LEAFGNAKTV+N+NSSRFGKF+ I F G+++ A I T
Sbjct: 205 EEQSGKMQGTLEDQIISANPLLEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIET 264
Query: 181 YLLERSRVCKISDPERNYHCFY-LLCAAPPDEIERYKL-GNPTSFHYLNQSNCYELVGVN 238
YLLE+SRV ER+YH FY ++ P+ I+ + NP +HY++Q + ++
Sbjct: 265 YLLEKSRVTFQLPAERSYHIFYQIMSNKKPELIDMLLITTNPYDYHYVSQGEI-TVPSID 323
Query: 239 DANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEF------EKGEEDSSVVKDNE 292
D + +AT A+D++G S E+ AI+ + A++H GN++F E+ E D + V D
Sbjct: 324 DQEELMATDSAIDILGFSADEKTAIYKLTGAVMHYGNLKFKQKQREEQAEPDGTEVADK- 382
Query: 293 SKFHLQMTAKLLMCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLF 352
A L+ + EL ALC + E + K S LAK +Y ++F
Sbjct: 383 -------AAYLMGLNSAELLKALCYPRVKVGNEFVTKGQTVSQVHNSVGALAKAVYEKMF 435
Query: 353 DWLVDKINVSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKM 412
W+V +IN + + IGVLDI G Q CINFTNEKLQQ FN ++F +
Sbjct: 436 LWMVIRINQQLDTKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVL 495
Query: 413 EQNDYRNEEIDWSYVHF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLY-Q 470
EQ +Y+ E I+W ++ F +D ++LIE KP GI ++L+E CMFPK+T +F KLY Q
Sbjct: 496 EQEEYKKEGIEWEFIDFGMDLAACIELIE-KPMGIFSILEEECMFPKATDTSFKNKLYDQ 554
Query: 471 TFKDHKRFIKPKLTR----SDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECS 526
F KPK + + F++VHYAG V Y +L+KNKD + L S
Sbjct: 555 HLGKSNNFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEKNKDPLNETVIGLYQKSSVK 614
Query: 527 FVSGLFPP----------XXXXXXXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKP 576
++ LF + F+ L +LM L ST PH++RC+ P
Sbjct: 615 TLALLFATYGGEAEGGGGKKGGKKKGSSFQTVSALFRENLNKLMANLRSTHPHFVRCIIP 674
Query: 577 NNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGIL----LPEIRK 632
N P ++ V+ QLR GVLE IR+ G+P+R +++F R+ +L +PE
Sbjct: 675 NETKTPGAMEHELVLHQLRCNGVLEGIRICRKGFPSRVLYADFKQRYRVLNASAIPE--G 732
Query: 633 QNYDEKIACKWILEKMDL--KGYQIGKTKVFLKAGQMAELDAKRAKLLGHSAEVIQSQHR 690
Q D K A + +L +D+ Y+ G TKVF KAG + L+ R L AE+I
Sbjct: 733 QFMDSKKASEKLLGSIDVDHTQYRFGHTKVFFKAGLLGLLEEMRDDKL---AEIITRTQA 789
Query: 691 R------RVTQKHYITLVQAAVCIQSSCRGIL 716
R RV + + ++ CIQ + R +
Sbjct: 790 RCRGFLMRVEYRRMVERRESIFCIQYNVRSFM 821
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In
Pre-power Stroke State
Length = 995
Score = 434 bits (1115), Expect = e-121, Method: Compositional matrix adjust.
Identities = 257/701 (36%), Positives = 401/701 (57%), Gaps = 40/701 (5%)
Query: 8 ADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGV 67
A+DM +L+ L+E VLHNL RY IYTY+G + +NP++ L +Y ++E Y+G
Sbjct: 62 AEDMAELTCLNEASVLHNLRERYYSGLIYTYSGLFCVVINPYKQLP-IYTEAIVEMYRGK 120
Query: 68 PFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAAE 127
++ PHV+A+ + AYR M+ + + SIL +GESGAGKTE TK +++YLA++ ++ +
Sbjct: 121 KRHEVPPHVYAVTEGAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAHVA--SSPK 178
Query: 128 GR-------SVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRT 180
GR +E+Q+L++NP+LEAFGNAKTVKN+NSSRFGKF+ I FD G I GA I T
Sbjct: 179 GRKEPGVPGELERQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVAGYIVGANIET 238
Query: 181 YLLERSRVCKISDPERNYHCFYLLCAAPPDEIERYKLGNPTSFHYLNQSNCYELVGVNDA 240
YLLE+SR + + E ++H FY L ++++ L P S HY +N +
Sbjct: 239 YLLEKSRAIRQAKDECSFHIFYQLLGGAGEQLKADLLLEPCS-HYRFLTNGPSSSPGQER 297
Query: 241 NDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEE-DSSVVKDNESKFHLQM 299
+ T ++ V+G S +E ++ +V+A+L GNI ++ D + + DN + Q
Sbjct: 298 ELFQETLESLRVLGFSHEEIISMLRMVSAVLQFGNIALKRERNTDQATMPDNTAA---QK 354
Query: 300 TAKLLMCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKI 359
+LL + AL + + ++K+ A + + LAK Y RLF WLV ++
Sbjct: 355 LCRLLGLGVTDFSRALLTPRIKVGRDYVQKAQTKEQADFALEALAKATYERLFRWLVLRL 414
Query: 360 NVSIGQDP-HSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYR 418
N ++ + P +G+LDI G Q CIN+TNEKLQQ FN +F +EQ +Y+
Sbjct: 415 NRALDRSPRQGASFLGILDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQ 474
Query: 419 NEEIDWSYVHF-VDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHENFSQKLYQTFKDH 475
E I W+++ F +D Q +DLIE+ P G++ALLDE C FPK+T ++F +K+ Q H
Sbjct: 475 REGIPWTFLDFGLDLQPCIDLIERPANPPGLLALLDEECWFPKATDKSFVEKVAQEQGGH 534
Query: 476 KRFIKPKLTR--SDFTIVHYAGEVHYQSDLFLDKNKD-------YVVAEHQDLLSASECS 526
+F +P+ R +DF+++HYAG+V Y+++ +L KN D ++ + D L+A
Sbjct: 535 PKFQRPRHLRDQADFSVLHYAGKVDYKANEWLMKNMDPLNDNVAALLHQSTDRLTAEIWK 594
Query: 527 FVSG---------LFPPXXXXXXXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCVKPN 577
V G L G +K L +LM TL++T P ++RC+ PN
Sbjct: 595 DVEGIVGLEQVSSLGDGPPGGRPRRGMFRTVGQLYKESLSRLMATLSNTNPSFVRCIVPN 654
Query: 578 NELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGILLPE-IRKQNYD 636
+E + L+ V+ QLR GVLE IR+ G+P R F EF R+ IL P I K D
Sbjct: 655 HEKRAGKLEPRLVLDQLRCNGVLEGIRICRQGFPNRILFQEFRQRYEILTPNAIPKGFMD 714
Query: 637 EKIACKWILEKMDLKG--YQIGKTKVFLKAGQMAELDAKRA 675
K AC+ +++ ++L Y++G++K+F +AG +A+L+ +RA
Sbjct: 715 GKQACEKMIQALELDPNLYRVGQSKIFFRAGVLAQLEEERA 755
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|B Chain B, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|C Chain C, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|D Chain D, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|E Chain E, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|F Chain F, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
Length = 791
Score = 433 bits (1113), Expect = e-121, Method: Compositional matrix adjust.
Identities = 258/712 (36%), Positives = 396/712 (55%), Gaps = 54/712 (7%)
Query: 8 ADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGV 67
+DM +L+ L+E VLHNL RY IYTY+G + +NP++ L +Y +++ YKG
Sbjct: 85 VEDMAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGK 143
Query: 68 PFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGG-HTAA 126
++ PH++AIAD AYR M+ + + SIL +GESGAGKTE TK +++YLA + H
Sbjct: 144 KRHEMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGK 203
Query: 127 EGRSV-----------EQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISG 175
+ S+ E+Q+L++NP+LEAFGNAKTVKN+NSSRFGKF+ I FD G I G
Sbjct: 204 KDTSITQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVG 263
Query: 176 AAIRTYLLERSRVCKISDPERNYHCFYLLCAAPPDEIERYKLGNPTSFHYLNQSNCYELV 235
A I TYLLE+SR + + ER +H FY L A +++ L + + + +
Sbjct: 264 ANIETYLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHVPIP 323
Query: 236 GVNDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEE-DSSVVKDNESK 294
D + T AM ++G + +EQ +I VV+++L LGNI F+K D + + DN
Sbjct: 324 AQQDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDN--- 380
Query: 295 FHLQMTAKLLMCDPGELEDALCKRVMITP-----EEIIKKSLDPVAATVSRDGLAKTIYS 349
TA +C + R ++TP ++++K+ A + + LAK +
Sbjct: 381 -----TAAQKVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFE 435
Query: 350 RLFDWLVDKINVSIGQDP-HSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQN 408
RLF W++ ++N ++ + +G+LDI G Q CIN+TNEKLQQ FN
Sbjct: 436 RLFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHT 495
Query: 409 VFKMEQNDYRNEEIDWSYVHF-VDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHENFS 465
+F +EQ +Y+ E I+W+++ F +D Q ++LIE+ P G++ALLDE C FPK+T +F
Sbjct: 496 MFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFV 555
Query: 466 QKLYQTFKDHKRFIKPKLT--RSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSAS 523
+KL Q +H +F K K +++F I+HYAG+V Y + +L KN D + LL+ S
Sbjct: 556 EKLIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQS 615
Query: 524 ECSFVSGLFPPX------------------XXXXXXXXXXXXXGSRFKLQLQQLMDTLNS 565
FV+ L+ G +K QL +LM TL +
Sbjct: 616 SDKFVADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRN 675
Query: 566 TEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGI 625
T P+++RC+ PN+E + LD++ V++QLR GVLE IR+ G+P R F EF R+ I
Sbjct: 676 TNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEI 735
Query: 626 LLPE-IRKQNYDEKIACKWILEKMDLKG--YQIGKTKVFLKAGQMAELDAKR 674
L I K D K AC +++ ++L Y+IG++K+F + G +A L+ +R
Sbjct: 736 LAANAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEER 787
>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
pdb|4DB1|B Chain B, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
Length = 783
Score = 429 bits (1104), Expect = e-120, Method: Compositional matrix adjust.
Identities = 249/700 (35%), Positives = 387/700 (55%), Gaps = 36/700 (5%)
Query: 9 DDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGVP 68
+DM L++LHEP VL+NL RY IYTY+G + +NP++ L +Y ++ Y+G
Sbjct: 88 EDMAMLTFLHEPAVLYNLKDRYGSWMIYTYSGLFCVTVNPYKWLP-VYTPEVVAAYRGKK 146
Query: 69 FGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGG------ 122
+ PH+F+I+D AY+ M+ + ++ SIL++GESGAGKT TK +++Y A +
Sbjct: 147 RSEAPPHIFSISDNAYQYMLTDRENQSILITGESGAGKTVNTKRVIQYFAVIAAIGDRSK 206
Query: 123 --HTAAEGRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRT 180
+ +G ++E Q++++NP LEAFGNAKTV+N+NSSRFGKF+ I F G+++ A I T
Sbjct: 207 KDQSPGKG-TLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIET 265
Query: 181 YLLERSRVCKISDPERNYHCFY-LLCAAPPDEIERYKL-GNPTSFHYLNQSNCYELVGVN 238
YLLE+SRV ER+YH FY +L P+ ++ + NP + +++Q + ++
Sbjct: 266 YLLEKSRVIFQLKAERDYHIFYQILSNKKPELLDMLLITNNPYDYAFISQGET-TVASID 324
Query: 239 DANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQ 298
DA + +AT A DV+G + +E+++++ + AI+H GN++F+ + + D +
Sbjct: 325 DAEELMATDNAFDVLGFTSEEKNSMYKLTGAIMHFGNMKFKLKQREEQAEPDGTEE--AD 382
Query: 299 MTAKLLMCDPGELEDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDK 358
+A L+ + +L LC + E + K + + LAK +Y R+F+W+V +
Sbjct: 383 KSAYLMGLNSADLLKGLCHPRVKVGNEYVTKGQNVQQVIYATGALAKAVYERMFNWMVTR 442
Query: 359 INVSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVFKMEQNDYR 418
IN ++ + IGVLDI G Q CINFTNEKLQQ FN ++F +EQ +Y+
Sbjct: 443 INATLETKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYK 502
Query: 419 NEEIDWSYVHF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLYQT-FKDHK 476
E I+W+++ F +D Q +DLIE KP GI+++L+E CMFPK+T F KL+
Sbjct: 503 KEGIEWTFIDFGMDLQACIDLIE-KPMGIMSILEEECMFPKATDMTFKAKLFDNHLGKSA 561
Query: 477 RFIKPKLTR----SDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLF 532
F KP+ + + F+++HYAG V Y +L KNKD + L S +S LF
Sbjct: 562 NFQKPRNIKGKPEAHFSLIHYAGIVDYNIIGWLQKNKDPLNETVVGLYQKSSLKLLSTLF 621
Query: 533 -------PPXXXXXXXXXXXXXXGSRFKLQ---LQQLMDTLNSTEPHYIRCVKPNNELKP 582
P + L L +LM L ST PH++RC+ PN P
Sbjct: 622 ANYAGADAPIEKGKGKAKKGSSFQTVSALHRENLNKLMTNLRSTHPHFVRCIIPNETKSP 681
Query: 583 VILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGILLPEI--RKQNYDEKIA 640
++D+ VM QLR GVLE IR+ G+P R + +F R+ IL P Q D +
Sbjct: 682 GVMDNPLVMHQLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNPAAIPEGQFIDSRKG 741
Query: 641 CKWILEKMDL--KGYQIGKTKVFLKAGQMAELDAKRAKLL 678
+ +L +D+ Y+ G TKVF KAG + L+ R + L
Sbjct: 742 AEKLLSSLDIDHNQYKFGHTKVFFKAGLLGLLEEMRDERL 781
>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 843
Score = 401 bits (1031), Expect = e-111, Method: Compositional matrix adjust.
Identities = 255/751 (33%), Positives = 392/751 (52%), Gaps = 58/751 (7%)
Query: 9 DDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGVP 68
+DM +++LHEP VL+NL RY IYTY+G + +NP+ L +Y+ ++ Y+G
Sbjct: 89 EDMAMMTHLHEPAVLYNLXERYAAWMIYTYSGLFCVTVNPYXWLP-VYNPXVVLAYRGKK 147
Query: 69 FGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLG--GHTAA 126
+ PH+F+I+D AY+ M+ + ++ SIL++GESGAGKT T +++Y A + G
Sbjct: 148 RQEAPPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTXRVIQYFATIAASGEKKK 207
Query: 127 EGRS------VEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRT 180
E +S +E Q++ +NP+LEAFGNA TV+N+NSSRFG F+ I F G+++ A I T
Sbjct: 208 EEQSGKMQGTLEDQIISANPLLEAFGNAXTVRNDNSSRFGXFIRIHFGATGKLASADIET 267
Query: 181 YLLERSRVCKISDPERNYHCFY-LLCAAPPDEIERYKL-GNPTSFHYLNQSNCYELVGVN 238
YLLE SRV ER+YH FY ++ P+ I+ + NP +HY+++ + ++
Sbjct: 268 YLLEXSRVTFQLPAERSYHIFYQIMSNXXPELIDMLLITTNPYDYHYVSEGEI-TVPSID 326
Query: 239 DANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEF------EKGEEDSSVVKDNE 292
D + +AT A+D++G S E AI+ + A++H GN++F E+ E D + V D
Sbjct: 327 DQEELMATDSAIDILGFSADEXTAIYXLTGAVMHYGNLKFXQXQREEQAEPDGTEVAD-- 384
Query: 293 SKFHLQMTAKLLMCDPGELEDALC-KRVMITPEEIIK-KSLDPVAATVSRDGLAKTIYSR 350
A L+ + EL ALC RV + E + +++ V +V LA +Y
Sbjct: 385 ------XAAYLMGLNSAELLKALCYPRVGVGNEAVTXGETVSEVHNSVG--ALAXAVYEX 436
Query: 351 LFDWLVDKINVSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVF 410
+F W+V +IN + + IGVLDI G Q CINFTNE LQQ FN ++F
Sbjct: 437 MFLWMVIRINQQLDTKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMF 496
Query: 411 KMEQNDYRNEEIDWSYVHF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLY 469
+EQ +Y E I+W ++ F +D ++LIE P GI ++L+E CMFPK+T +F LY
Sbjct: 497 VLEQEEYXXEGIEWEFIDFGMDLAACIELIE-XPMGIFSILEEECMFPKATDTSFXNXLY 555
Query: 470 -QTFKDHKRFIKPKLTR----SDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASE 524
+ F KPK + + F++VHYAG V Y +L+ N D + L S
Sbjct: 556 DEHLGKSNNFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEXNXDPLNETVIGLYQXSS 615
Query: 525 CSFVSGLFPP----------XXXXXXXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCV 574
++ LF + F+ L LM L ST PH++RC+
Sbjct: 616 VXTLALLFATYGGEAEGGGGKKGGKKKGSSFQTVSALFRENLNXLMANLRSTHPHFVRCI 675
Query: 575 KPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGIL----LPEI 630
PN P ++ V+ QLR GVLE IR+ G+P+R +++F R+ +L +PE
Sbjct: 676 IPNETXTPGAMEHELVLHQLRCNGVLEGIRICRKGFPSRVLYADFKQRYRVLNASAIPE- 734
Query: 631 RKQNYDEKIACKWILEKMDL--KGYQIGKTKVFLKAGQMAELDAKRAKLLGHSAEVIQSQ 688
Q D K A + +L D+ Y G T VF AG + L+ R L Q++
Sbjct: 735 -GQFMDSKKASEKLLGGGDVDHTQYAFGHTXVFFXAGLLGLLEEMRDDXLAEIITATQAR 793
Query: 689 HRRRVTQKHYITLV---QAAVCIQSSCRGIL 716
R + + Y +V ++ CIQ + R +
Sbjct: 794 CRGFLMRVEYRAMVERRESIFCIQYNVRSFM 824
>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|S Chain S, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 840
Score = 401 bits (1030), Expect = e-111, Method: Compositional matrix adjust.
Identities = 255/751 (33%), Positives = 392/751 (52%), Gaps = 58/751 (7%)
Query: 9 DDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGVP 68
+DM +++LHEP VL+NL RY IYTY+G + +NP+ L +Y+ ++ Y+G
Sbjct: 86 EDMAMMTHLHEPAVLYNLXERYAAWMIYTYSGLFCVTVNPYXWLP-VYNPXVVLAYRGKK 144
Query: 69 FGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLG--GHTAA 126
+ PH+F+I+D AY+ M+ + ++ SIL++GESGAGKT T +++Y A + G
Sbjct: 145 RQEAPPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTXRVIQYFATIAASGEKKK 204
Query: 127 EGRS------VEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRT 180
E +S +E Q++ +NP+LEAFGNA TV+N+NSSRFG F+ I F G+++ A I T
Sbjct: 205 EEQSGKMQGTLEDQIISANPLLEAFGNAXTVRNDNSSRFGXFIRIHFGATGKLASADIET 264
Query: 181 YLLERSRVCKISDPERNYHCFY-LLCAAPPDEIERYKL-GNPTSFHYLNQSNCYELVGVN 238
YLLE SRV ER+YH FY ++ P+ I+ + NP +HY+++ + ++
Sbjct: 265 YLLEXSRVTFQLPAERSYHIFYQIMSNXXPELIDMLLITTNPYDYHYVSEGEI-TVPSID 323
Query: 239 DANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEF------EKGEEDSSVVKDNE 292
D + +AT A+D++G S E AI+ + A++H GN++F E+ E D + V D
Sbjct: 324 DQEELMATDSAIDILGFSADEXTAIYXLTGAVMHYGNLKFXQXQREEQAEPDGTEVAD-- 381
Query: 293 SKFHLQMTAKLLMCDPGELEDALC-KRVMITPEEIIK-KSLDPVAATVSRDGLAKTIYSR 350
A L+ + EL ALC RV + E + +++ V +V LA +Y
Sbjct: 382 ------XAAYLMGLNSAELLKALCYPRVGVGNEAVTXGETVSEVHNSVG--ALAXAVYEX 433
Query: 351 LFDWLVDKINVSIGQDPHSKCLIGVLDIYGXXXXXXXXXXQFCINFTNEKLQQHFNQNVF 410
+F W+V +IN + + IGVLDI G Q CINFTNE LQQ FN ++F
Sbjct: 434 MFLWMVIRINQQLDTKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMF 493
Query: 411 KMEQNDYRNEEIDWSYVHF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLY 469
+EQ +Y E I+W ++ F +D ++LIE P GI ++L+E CMFPK+T +F LY
Sbjct: 494 VLEQEEYXXEGIEWEFIDFGMDLAACIELIE-XPMGIFSILEEECMFPKATDTSFXNXLY 552
Query: 470 -QTFKDHKRFIKPKLTR----SDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASE 524
+ F KPK + + F++VHYAG V Y +L+ N D + L S
Sbjct: 553 DEHLGKSNNFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEXNXDPLNETVIGLYQXSS 612
Query: 525 CSFVSGLFPP----------XXXXXXXXXXXXXXGSRFKLQLQQLMDTLNSTEPHYIRCV 574
++ LF + F+ L LM L ST PH++RC+
Sbjct: 613 VXTLALLFATYGGEAEGGGGKKGGKKKGSSFQTVSALFRENLNXLMANLRSTHPHFVRCI 672
Query: 575 KPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGIL----LPEI 630
PN P ++ V+ QLR GVLE IR+ G+P+R +++F R+ +L +PE
Sbjct: 673 IPNETXTPGAMEHELVLHQLRCNGVLEGIRICRKGFPSRVLYADFKQRYRVLNASAIPE- 731
Query: 631 RKQNYDEKIACKWILEKMDL--KGYQIGKTKVFLKAGQMAELDAKRAKLLGHSAEVIQSQ 688
Q D K A + +L D+ Y G T VF AG + L+ R L Q++
Sbjct: 732 -GQFMDSKKASEKLLGGGDVDHTQYAFGHTXVFFXAGLLGLLEEMRDDXLAEIITATQAR 790
Query: 689 HRRRVTQKHYITLV---QAAVCIQSSCRGIL 716
R + + Y +V ++ CIQ + R +
Sbjct: 791 CRGFLMRVEYRAMVERRESIFCIQYNVRSFM 821
>pdb|2L1O|A Chain A, Zinc To Cadmium Replacement In The A. Thaliana Superman
Cys2his2 Zinc Finger Induces Structural Rearrangements Of
Typical Dna Base Determinant Positions
pdb|1NJQ|A Chain A, Nmr Structure Of The Single Qalggh Zinc Finger Domain From
Arabidopsis Thaliana Superman Protein
Length = 39
Score = 66.2 bits (160), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1111 WPPKNYNCSFCRREFRSAQALGGHMNVH 1138
WPP++Y CSFC+REFRSAQALGGHMNVH
Sbjct: 2 WPPRSYTCSFCKREFRSAQALGGHMNVH 29
>pdb|2WAX|A Chain A, Structure Of The Human Ddx6 C-Terminal Domain In Complex
With An Edc3-Fdf Peptide
pdb|2WAX|C Chain C, Structure Of The Human Ddx6 C-Terminal Domain In Complex
With An Edc3-Fdf Peptide
pdb|2WAY|A Chain A, Structure Of The Human Ddx6 C-Terminal Domain In Complex
With An Edc3-Fdf Peptide
pdb|2WAY|C Chain C, Structure Of The Human Ddx6 C-Terminal Domain In Complex
With An Edc3-Fdf Peptide
Length = 193
Score = 34.3 bits (77), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 654 QIGKTKVFLKAGQMAELDAKRAKLLGHSAEVIQS----QHRRRVTQKHYITLVQAAVCIQ 709
QI ++ +F + Q EL AK+ LG+S I + +HR RV L + VC
Sbjct: 43 QINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTD 102
Query: 710 SSCRGI 715
RGI
Sbjct: 103 LFTRGI 108
>pdb|3DZD|A Chain A, Crystal Structure Of Sigma54 Activator Ntrc4 In The
Inactive State
pdb|3DZD|B Chain B, Crystal Structure Of Sigma54 Activator Ntrc4 In The
Inactive State
Length = 368
Score = 33.5 bits (75), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 96 ILVSGESGAGKTETTKMIMRYLAYLGGHTAAEGRSVEQQVLESNPVLEAFGNAK 149
+L++GESG GK ++I RY G S+ Q++ ES E FG+ K
Sbjct: 155 VLITGESGTGKEIVARLIHRYSGRKGAFVDLNCASIPQELAES----ELFGHEK 204
>pdb|3I99|A Chain A, The Crystal Structure Of The
Udp-N-Acetylenolpyruvoylglucosamine Reductase From The
Vibrio Cholerae O1 Biovar Tor
Length = 357
Score = 30.4 bits (67), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 638 KIACKWILEKMDLKGYQIGKTKVFLK 663
K+A W++++ LKG+QIG KV K
Sbjct: 274 KVAAGWLIDQAGLKGHQIGGAKVHPK 299
>pdb|3CLH|A Chain A, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs)from
Helicobacter Pylori
pdb|3CLH|B Chain B, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs)from
Helicobacter Pylori
Length = 343
Score = 30.4 bits (67), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 1216 NEDKKRLLEECPHQQINTLSSTLPSGDYLRKKKNMRAAFGAGNSKGYAPKREIDVLRKKE 1275
+D K LEE Q +N + + + K++N+RA G++ G+A ++E D R
Sbjct: 192 TKDLKDCLEEVIFQSVNIKAQVVVQDE---KEQNIRAGLNYGHTFGHAIEKETDYERFLH 248
Query: 1276 ELAMSLELEMGLKDTKESVDLELRLG 1301
A+++ + M + DL L LG
Sbjct: 249 GEAIAIGMRM-------ANDLALSLG 267
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,699,559
Number of Sequences: 62578
Number of extensions: 1210685
Number of successful extensions: 4024
Number of sequences better than 100.0: 69
Number of HSP's better than 100.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3429
Number of HSP's gapped (non-prelim): 97
length of query: 1303
length of database: 14,973,337
effective HSP length: 110
effective length of query: 1193
effective length of database: 8,089,757
effective search space: 9651080101
effective search space used: 9651080101
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)