Query 048174
Match_columns 1303
No_of_seqs 693 out of 2693
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 12:02:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048174.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048174hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dfs_A Myosin-5A; myosin-V, in 100.0 2E-222 5E-227 2145.0 85.1 940 6-998 69-1051(1080)
2 1i84_S Smooth muscle myosin he 100.0 3E-198 1E-202 1959.7 70.7 718 6-750 83-841 (1184)
3 1kk8_A Myosin heavy chain, str 100.0 1E-197 4E-202 1855.1 62.6 717 6-750 83-828 (837)
4 1w7j_A Myosin VA; motor protei 100.0 6E-197 2E-201 1840.4 61.4 693 6-705 69-794 (795)
5 4anj_A Unconventional myosin-V 100.0 7E-197 2E-201 1876.5 45.6 708 4-719 55-814 (1052)
6 1g8x_A Myosin II heavy chain f 100.0 6E-191 2E-195 1832.2 70.3 677 6-687 86-771 (1010)
7 1lkx_A Myosin IE heavy chain; 100.0 2E-192 6E-197 1778.2 51.6 671 3-678 5-696 (697)
8 2ycu_A Non muscle myosin 2C, a 100.0 2E-191 6E-196 1840.7 50.0 718 6-749 60-809 (995)
9 4db1_A Myosin-7; S1DC, cardiac 100.0 1E-190 4E-195 1774.5 53.7 668 6-679 85-782 (783)
10 2v26_A Myosin VI; calmodulin-b 100.0 2E-189 6E-194 1773.6 57.0 682 4-693 51-784 (784)
11 1w9i_A Myosin II heavy chain; 100.0 8E-190 3E-194 1761.5 51.2 671 6-683 86-767 (770)
12 2dfs_A Myosin-5A; myosin-V, in 99.9 5E-23 1.7E-27 269.3 25.4 277 693-1001 759-1047(1080)
13 1i84_S Smooth muscle myosin he 99.1 1.2E-10 4.2E-15 155.9 9.9 20 782-801 819-838 (1184)
14 2ix7_C Myosin-5A; contractIle 98.9 2.3E-10 7.9E-15 98.0 0.8 55 677-731 3-57 (58)
15 4gzn_C ZFP-57, zinc finger pro 98.7 1.2E-09 4E-14 94.3 0.2 49 1085-1143 1-60 (60)
16 1n2d_C IQ2 and IQ3 motifs from 98.7 4E-09 1.4E-13 86.6 1.9 46 701-746 2-47 (48)
17 2ix7_C Myosin-5A; contractIle 98.6 7.9E-08 2.7E-12 82.2 8.1 51 780-830 4-54 (58)
18 1n2d_C IQ2 and IQ3 motifs from 98.3 1.6E-06 5.3E-11 71.1 7.3 21 780-800 27-47 (48)
19 2lce_A B-cell lymphoma 6 prote 98.1 3.4E-07 1.2E-11 81.4 0.3 52 1081-1142 10-72 (74)
20 1x5w_A Zinc finger protein 64, 98.1 8.2E-07 2.8E-11 78.0 1.5 52 1081-1142 2-64 (70)
21 1bbo_A Human enhancer-binding 98.0 1.2E-06 4.1E-11 73.4 0.3 45 1088-1142 1-56 (57)
22 1x6e_A Zinc finger protein 24; 97.9 1.7E-06 5.9E-11 76.4 1.0 50 1082-1141 8-68 (72)
23 2cot_A Zinc finger protein 435 97.9 2.3E-06 7.8E-11 76.6 1.6 50 1083-1142 13-73 (77)
24 2lvt_A Zinc finger and BTB dom 97.1 1.4E-06 4.9E-11 62.2 0.0 29 1114-1142 1-29 (29)
25 2elr_A Zinc finger protein 406 97.9 2.5E-06 8.7E-11 64.2 1.4 31 1112-1142 6-36 (36)
26 2eln_A Zinc finger protein 406 97.9 2.4E-06 8.2E-11 66.4 1.2 30 1112-1141 6-37 (38)
27 1rim_A E6APC2 peptide; E6-bind 97.9 2.1E-06 7.1E-11 63.9 0.7 29 1114-1142 1-29 (33)
28 2m0e_A Zinc finger and BTB dom 97.9 2.4E-06 8.2E-11 60.5 0.8 29 1114-1142 1-29 (29)
29 1rik_A E6APC1 peptide; E6-bind 97.9 2.7E-06 9.1E-11 60.6 0.9 29 1114-1142 1-29 (29)
30 2m0d_A Zinc finger and BTB dom 97.9 2.4E-06 8.2E-11 61.1 0.6 30 1113-1142 1-30 (30)
31 2els_A Zinc finger protein 406 97.9 2.9E-06 9.9E-11 64.0 1.1 31 1112-1142 6-36 (36)
32 2lv2_A Insulinoma-associated p 97.9 3.3E-06 1.1E-10 78.0 1.5 50 1083-1142 23-84 (85)
33 2m0f_A Zinc finger and BTB dom 97.9 2.2E-06 7.6E-11 60.8 0.1 29 1114-1142 1-29 (29)
34 1njq_A Superman protein; zinc- 97.8 3.3E-06 1.1E-10 65.1 1.1 32 1112-1143 3-34 (39)
35 2lvr_A Zinc finger and BTB dom 97.1 2.2E-06 7.5E-11 61.4 0.0 29 1114-1142 2-30 (30)
36 2elt_A Zinc finger protein 406 97.8 3.5E-06 1.2E-10 63.4 1.1 31 1112-1142 6-36 (36)
37 2elq_A Zinc finger protein 406 97.8 4.4E-06 1.5E-10 63.0 1.6 31 1112-1142 6-36 (36)
38 1p7a_A BF3, BKLF, kruppel-like 97.8 5.2E-06 1.8E-10 62.9 1.9 29 1113-1141 9-37 (37)
39 1ard_A Yeast transcription fac 97.8 3.1E-06 1E-10 60.2 0.5 29 1114-1142 1-29 (29)
40 2kfq_A FP1; protein, de novo p 97.8 1.5E-06 5.3E-11 64.1 -1.1 29 1114-1142 1-29 (32)
41 2elv_A Zinc finger protein 406 97.8 4.6E-06 1.6E-10 62.9 1.5 31 1112-1142 6-36 (36)
42 2lt7_A Transcriptional regulat 97.8 2.4E-06 8.2E-11 85.7 -0.7 51 1082-1142 16-77 (133)
43 3uk3_C Zinc finger protein 217 97.8 2.8E-06 9.7E-11 71.0 -0.4 45 1086-1140 2-57 (57)
44 4gzn_C ZFP-57, zinc finger pro 97.8 4.1E-06 1.4E-10 72.0 0.5 30 1113-1142 2-31 (60)
45 2d9h_A Zinc finger protein 692 97.8 4.6E-06 1.6E-10 74.7 0.7 52 1083-1141 2-65 (78)
46 2ghf_A ZHX1, zinc fingers and 97.8 5.3E-06 1.8E-10 79.3 1.1 53 1083-1142 13-78 (102)
47 2eos_A B-cell lymphoma 6 prote 97.8 6.7E-06 2.3E-10 64.4 1.5 30 1113-1142 9-38 (42)
48 1srk_A Zinc finger protein ZFP 97.8 5.4E-06 1.9E-10 62.0 0.9 30 1113-1142 5-34 (35)
49 2epp_A POZ-, at HOOK-, and zin 97.7 2E-05 6.9E-10 69.0 4.6 33 1111-1143 9-41 (66)
50 2elx_A Zinc finger protein 406 97.7 6.1E-06 2.1E-10 61.5 1.1 30 1113-1142 5-34 (35)
51 2drp_A Protein (tramtrack DNA- 97.7 5.2E-06 1.8E-10 71.7 0.7 49 1083-1140 5-65 (66)
52 2adr_A ADR1; transcription reg 97.7 5.7E-06 2E-10 70.0 0.8 45 1087-1141 1-57 (60)
53 1sp2_A SP1F2; zinc finger, tra 97.7 6.3E-06 2.1E-10 59.9 0.7 29 1114-1142 1-31 (31)
54 2kvh_A Zinc finger and BTB dom 97.7 7E-06 2.4E-10 57.6 0.9 27 1113-1139 1-27 (27)
55 2elp_A Zinc finger protein 406 97.7 8.5E-06 2.9E-10 61.8 1.4 31 1112-1142 6-37 (37)
56 2elo_A Zinc finger protein 406 97.7 6.5E-06 2.2E-10 62.4 0.6 30 1113-1142 7-36 (37)
57 2epv_A Zinc finger protein 268 97.7 1E-05 3.4E-10 64.2 1.6 30 1113-1142 10-39 (44)
58 2en2_A B-cell lymphoma 6 prote 97.7 7.4E-06 2.5E-10 64.0 0.8 30 1113-1142 9-38 (42)
59 2epc_A Zinc finger protein 32; 97.7 9.6E-06 3.3E-10 63.3 1.4 30 1113-1142 9-38 (42)
60 1znf_A 31ST zinc finger from X 97.7 8E-06 2.7E-10 57.0 0.8 27 1115-1141 1-27 (27)
61 2kvg_A Zinc finger and BTB dom 97.7 7.1E-06 2.4E-10 57.8 0.5 27 1113-1139 1-27 (27)
62 1zfd_A SWI5; DNA binding motif 97.7 1E-05 3.4E-10 59.2 1.4 29 1114-1142 2-32 (32)
63 2enh_A Zinc finger protein 28 97.7 1.3E-05 4.5E-10 64.1 2.1 30 1113-1142 10-39 (46)
64 1paa_A Yeast transcription fac 97.7 8.4E-06 2.9E-10 58.4 0.8 29 1114-1142 1-30 (30)
65 2kvf_A Zinc finger and BTB dom 97.7 8.4E-06 2.9E-10 57.5 0.8 27 1114-1140 2-28 (28)
66 2emi_A Zinc finger protein 484 97.7 1.1E-05 3.9E-10 64.3 1.6 30 1113-1142 10-39 (46)
67 2el5_A Zinc finger protein 268 97.7 1.2E-05 4E-10 62.8 1.6 30 1113-1142 8-37 (42)
68 2lvu_A Zinc finger and BTB dom 96.8 6.4E-06 2.2E-10 57.2 0.0 26 1114-1139 1-26 (26)
69 1a1h_A QGSR zinc finger peptid 97.7 6.9E-06 2.3E-10 75.3 0.2 50 1083-1142 29-89 (90)
70 2ely_A Zinc finger protein 224 97.7 1.5E-05 5.2E-10 63.7 2.2 30 1113-1142 10-39 (46)
71 2ytb_A Zinc finger protein 32; 97.6 1.1E-05 3.8E-10 62.9 1.3 30 1113-1142 9-38 (42)
72 2em4_A Zinc finger protein 28 97.6 1.1E-05 3.8E-10 64.5 1.3 30 1113-1142 10-39 (46)
73 2eoh_A Zinc finger protein 28 97.6 1.3E-05 4.5E-10 64.1 1.7 30 1113-1142 10-39 (46)
74 2yte_A Zinc finger protein 473 97.6 1.4E-05 4.8E-10 62.3 1.7 30 1113-1142 8-37 (42)
75 2eon_A ZFP-95, zinc finger pro 97.6 1.3E-05 4.4E-10 64.2 1.6 30 1113-1142 10-39 (46)
76 2epz_A Zinc finger protein 28 97.6 1.4E-05 4.9E-10 63.8 1.8 30 1113-1142 10-39 (46)
77 2emg_A Zinc finger protein 484 97.6 1.4E-05 4.6E-10 63.9 1.6 30 1113-1142 10-39 (46)
78 1klr_A Zinc finger Y-chromosom 97.6 1.1E-05 3.6E-10 57.6 0.8 29 1114-1142 1-29 (30)
79 2enf_A Zinc finger protein 347 97.6 1.6E-05 5.4E-10 63.5 1.8 30 1113-1142 10-39 (46)
80 1va1_A Transcription factor SP 97.6 1.1E-05 3.8E-10 61.4 0.8 31 1112-1142 5-37 (37)
81 2en7_A Zinc finger protein 268 97.6 1.4E-05 4.9E-10 63.0 1.4 30 1113-1142 10-39 (44)
82 2elz_A Zinc finger protein 224 97.6 1.8E-05 6E-10 63.3 1.9 30 1113-1142 10-39 (46)
83 2eoj_A Zinc finger protein 268 97.6 1.4E-05 4.8E-10 63.1 1.3 30 1113-1142 10-39 (44)
84 2ytf_A Zinc finger protein 268 97.6 1.6E-05 5.4E-10 63.5 1.5 30 1113-1142 10-39 (46)
85 2ytq_A Zinc finger protein 268 97.6 1.8E-05 6.1E-10 63.3 1.8 30 1113-1142 10-39 (46)
86 2ytp_A Zinc finger protein 484 97.6 1.5E-05 5E-10 63.8 1.3 30 1113-1142 10-39 (46)
87 2em7_A Zinc finger protein 224 97.6 1.7E-05 5.7E-10 63.4 1.7 30 1113-1142 10-39 (46)
88 2eof_A Zinc finger protein 268 97.6 1.6E-05 5.5E-10 62.6 1.6 30 1113-1142 10-39 (44)
89 2eou_A Zinc finger protein 473 97.6 1.6E-05 5.4E-10 62.9 1.5 30 1113-1142 10-39 (44)
90 2epu_A Zinc finger protein 32; 97.6 1.4E-05 4.8E-10 63.6 1.1 31 1112-1142 9-39 (45)
91 2emf_A Zinc finger protein 484 97.6 1.7E-05 5.7E-10 63.4 1.5 30 1113-1142 10-39 (46)
92 2emj_A Zinc finger protein 28 97.6 1.5E-05 5.2E-10 63.7 1.3 30 1113-1142 10-39 (46)
93 2yti_A Zinc finger protein 347 97.6 1.7E-05 5.8E-10 63.3 1.6 30 1113-1142 10-39 (46)
94 2ctu_A Zinc finger protein 483 97.6 1.3E-05 4.3E-10 70.3 0.8 55 1082-1142 12-66 (73)
95 2eoy_A Zinc finger protein 473 97.6 2E-05 6.9E-10 63.0 1.9 30 1113-1142 10-40 (46)
96 2ytn_A Zinc finger protein 347 97.6 1.9E-05 6.5E-10 63.0 1.7 30 1113-1142 10-39 (46)
97 2eq2_A Zinc finger protein 347 97.6 1.8E-05 6.1E-10 63.2 1.6 30 1113-1142 10-39 (46)
98 2ytm_A Zinc finger protein 28 97.6 1.6E-05 5.6E-10 63.6 1.3 30 1113-1142 10-39 (46)
99 2em6_A Zinc finger protein 224 97.6 1.9E-05 6.6E-10 63.1 1.7 30 1113-1142 10-39 (46)
100 2yu5_A Zinc finger protein 473 97.6 2E-05 6.9E-10 62.2 1.8 30 1113-1142 10-39 (44)
101 2emx_A Zinc finger protein 268 97.6 1.6E-05 5.4E-10 62.8 1.2 30 1113-1142 8-37 (44)
102 2eml_A Zinc finger protein 28 97.6 1.8E-05 6.2E-10 63.2 1.5 30 1113-1142 10-39 (46)
103 2enc_A Zinc finger protein 224 97.6 1.9E-05 6.5E-10 63.0 1.6 30 1113-1142 10-39 (46)
104 2emz_A ZFP-95, zinc finger pro 97.6 1.9E-05 6.5E-10 63.1 1.6 30 1113-1142 10-39 (46)
105 2emb_A Zinc finger protein 473 97.6 1.8E-05 6.3E-10 62.5 1.5 30 1113-1142 10-39 (44)
106 2eow_A Zinc finger protein 347 97.6 1.6E-05 5.5E-10 63.4 1.2 30 1113-1142 10-39 (46)
107 2epw_A Zinc finger protein 268 97.6 2E-05 7E-10 62.8 1.8 30 1113-1142 10-39 (46)
108 2gqj_A Zinc finger protein KIA 97.6 6.8E-06 2.3E-10 77.4 -1.3 60 1083-1143 19-82 (98)
109 2el4_A Zinc finger protein 268 97.6 1.9E-05 6.4E-10 63.0 1.5 30 1113-1142 10-39 (46)
110 2en9_A Zinc finger protein 28 97.6 1.9E-05 6.5E-10 63.1 1.5 30 1113-1142 10-39 (46)
111 2yts_A Zinc finger protein 484 97.6 1.9E-05 6.4E-10 63.0 1.4 30 1113-1142 10-39 (46)
112 2em2_A Zinc finger protein 28 97.6 1.8E-05 6.1E-10 63.3 1.3 30 1113-1142 10-39 (46)
113 2ep3_A Zinc finger protein 484 97.6 1.9E-05 6.6E-10 63.0 1.5 30 1113-1142 10-39 (46)
114 2eq4_A Zinc finger protein 224 97.6 2.1E-05 7.3E-10 62.6 1.7 30 1113-1142 10-39 (46)
115 2eq1_A Zinc finger protein 347 97.6 1.9E-05 6.6E-10 63.0 1.4 30 1113-1142 10-39 (46)
116 2ep1_A Zinc finger protein 484 97.6 2.2E-05 7.4E-10 62.6 1.7 30 1113-1142 10-39 (46)
117 2ee8_A Protein ODD-skipped-rel 97.6 2.1E-05 7.1E-10 74.6 1.9 49 1083-1141 40-99 (106)
118 2em3_A Zinc finger protein 28 97.6 1.8E-05 6E-10 63.2 1.2 30 1113-1142 10-39 (46)
119 2yth_A Zinc finger protein 224 97.6 2.2E-05 7.7E-10 62.7 1.8 30 1113-1142 10-39 (46)
120 2ysp_A Zinc finger protein 224 97.5 1.8E-05 6E-10 63.2 1.1 30 1113-1142 10-39 (46)
121 2ep2_A Zinc finger protein 484 97.5 2E-05 7E-10 62.9 1.5 30 1113-1142 10-39 (46)
122 2eoo_A ZFP-95, zinc finger pro 97.5 1.9E-05 6.6E-10 63.1 1.4 30 1113-1142 10-39 (46)
123 2eop_A Zinc finger protein 268 97.5 2.2E-05 7.6E-10 62.5 1.7 30 1113-1142 10-39 (46)
124 2el6_A Zinc finger protein 268 97.5 2.2E-05 7.7E-10 62.7 1.7 31 1112-1142 9-39 (46)
125 2em0_A Zinc finger protein 224 97.5 2.3E-05 7.8E-10 62.6 1.7 30 1113-1142 10-39 (46)
126 2ene_A Zinc finger protein 347 97.5 1.9E-05 6.4E-10 63.1 1.3 30 1113-1142 10-39 (46)
127 1x6h_A Transcriptional repress 97.5 2.6E-05 8.9E-10 70.7 2.4 55 1082-1142 9-74 (86)
128 2en3_A ZFP-95, zinc finger pro 97.5 2.1E-05 7.1E-10 62.8 1.5 30 1113-1142 10-39 (46)
129 2eor_A Zinc finger protein 224 97.5 1.9E-05 6.4E-10 63.0 1.2 30 1113-1142 10-39 (46)
130 2ytr_A Zinc finger protein 347 97.5 2.2E-05 7.5E-10 62.6 1.6 30 1113-1142 10-39 (46)
131 2eoe_A Zinc finger protein 347 97.5 2.1E-05 7.1E-10 62.7 1.4 30 1113-1142 10-39 (46)
132 2eoq_A Zinc finger protein 224 97.5 2.2E-05 7.4E-10 62.7 1.5 30 1113-1142 10-39 (46)
133 2ctd_A Zinc finger protein 512 97.5 3.8E-05 1.3E-09 72.3 3.5 55 1085-1140 31-88 (96)
134 2yu8_A Zinc finger protein 347 97.5 1.9E-05 6.3E-10 63.1 1.1 30 1113-1142 10-39 (46)
135 2emy_A Zinc finger protein 268 97.5 2E-05 6.8E-10 62.9 1.2 30 1113-1142 10-39 (46)
136 2eme_A Zinc finger protein 473 97.5 2.3E-05 7.8E-10 62.5 1.6 30 1113-1142 10-39 (46)
137 2eq0_A Zinc finger protein 347 97.5 2E-05 6.9E-10 62.9 1.2 30 1113-1142 10-39 (46)
138 2em9_A Zinc finger protein 224 97.5 2.3E-05 8E-10 62.4 1.6 30 1113-1142 10-39 (46)
139 2yto_A Zinc finger protein 484 97.5 2E-05 6.7E-10 63.0 1.1 30 1113-1142 10-39 (46)
140 2epr_A POZ-, at HOOK-, and zin 97.5 2.3E-05 7.8E-10 63.4 1.5 33 1110-1142 7-39 (48)
141 1f2i_G Fusion of N-terminal 17 97.5 1.5E-05 5E-10 70.3 0.4 48 1082-1139 13-73 (73)
142 2ytj_A Zinc finger protein 484 97.5 2.2E-05 7.5E-10 62.7 1.4 30 1113-1142 10-39 (46)
143 2emk_A Zinc finger protein 28 97.5 2.3E-05 7.9E-10 62.6 1.4 30 1113-1142 10-39 (46)
144 2em8_A Zinc finger protein 224 97.5 2E-05 6.9E-10 63.0 1.1 30 1113-1142 10-39 (46)
145 2yrj_A Zinc finger protein 473 97.5 2.2E-05 7.6E-10 62.5 1.3 30 1113-1142 10-39 (46)
146 2eov_A Zinc finger protein 484 97.5 2.4E-05 8.2E-10 62.4 1.5 30 1113-1142 10-39 (46)
147 2eoz_A Zinc finger protein 473 97.5 1.9E-05 6.5E-10 63.1 0.9 30 1113-1142 10-39 (46)
148 2emh_A Zinc finger protein 484 97.5 2E-05 6.9E-10 62.9 1.1 30 1113-1142 10-39 (46)
149 2ema_A Zinc finger protein 347 97.5 2.3E-05 8E-10 62.5 1.4 30 1113-1142 10-39 (46)
150 2emp_A Zinc finger protein 347 97.5 2.1E-05 7.1E-10 62.8 1.1 30 1113-1142 10-39 (46)
151 2ytd_A Zinc finger protein 473 97.5 2.2E-05 7.6E-10 62.6 1.2 30 1113-1142 10-39 (46)
152 2ept_A Zinc finger protein 32; 97.5 2.6E-05 9E-10 60.5 1.6 31 1112-1142 7-37 (41)
153 2emm_A ZFP-95, zinc finger pro 97.5 2.3E-05 7.9E-10 62.5 1.2 30 1113-1142 10-39 (46)
154 2eox_A Zinc finger protein 473 97.5 2E-05 6.8E-10 62.3 0.8 30 1113-1142 10-39 (44)
155 2em5_A ZFP-95, zinc finger pro 97.5 2.4E-05 8.1E-10 62.5 1.3 30 1113-1142 10-39 (46)
156 2yso_A ZFP-95, zinc finger pro 97.5 2.4E-05 8.2E-10 62.4 1.3 30 1113-1142 10-39 (46)
157 2ytg_A ZFP-95, zinc finger pro 97.5 2.4E-05 8.4E-10 62.4 1.3 30 1113-1142 10-39 (46)
158 2en6_A Zinc finger protein 268 97.5 2.1E-05 7.3E-10 62.7 0.9 30 1113-1142 10-39 (46)
159 2en8_A Zinc finger protein 224 97.5 2.5E-05 8.4E-10 62.3 1.3 30 1113-1142 10-39 (46)
160 2kmk_A Zinc finger protein GFI 97.5 1.5E-05 5.3E-10 71.4 -0.1 48 1083-1140 24-82 (82)
161 2ytk_A Zinc finger protein 347 97.5 2.6E-05 8.8E-10 62.2 1.2 30 1113-1142 10-39 (46)
162 2eq3_A Zinc finger protein 347 97.5 2.6E-05 8.9E-10 62.1 1.2 30 1113-1142 10-39 (46)
163 2dmd_A Zinc finger protein 64, 97.5 2.5E-05 8.5E-10 72.5 1.2 50 1083-1142 31-91 (96)
164 2yrm_A B-cell lymphoma 6 prote 97.5 3.3E-05 1.1E-09 60.9 1.6 31 1112-1142 7-37 (43)
165 2eom_A ZFP-95, zinc finger pro 97.4 3.2E-05 1.1E-09 61.8 1.4 31 1112-1142 9-39 (46)
166 2ep0_A Zinc finger protein 28 97.4 3.2E-05 1.1E-09 61.7 1.4 31 1112-1142 9-39 (46)
167 2en1_A Zinc finger protein 224 97.4 3E-05 1E-09 61.8 1.2 30 1113-1142 10-39 (46)
168 2ytt_A Zinc finger protein 473 97.4 3.4E-05 1.2E-09 61.6 1.3 31 1112-1142 9-39 (46)
169 1wdc_A Scallop myosin; calcium 97.4 4.4E-05 1.5E-09 66.5 2.1 49 702-750 6-55 (64)
170 1x3c_A Zinc finger protein 292 97.4 6.3E-05 2.1E-09 65.9 3.0 33 1111-1143 23-58 (73)
171 2bl0_A Major plasmodial myosin 97.4 3.5E-05 1.2E-09 66.9 1.4 50 701-750 3-53 (63)
172 2dmd_A Zinc finger protein 64, 97.4 4.3E-05 1.5E-09 70.9 1.9 50 1083-1142 3-63 (96)
173 2epx_A Zinc finger protein 28 97.4 5.1E-05 1.7E-09 60.6 1.8 30 1113-1142 10-40 (47)
174 2elm_A Zinc finger protein 406 97.4 2.8E-05 9.5E-10 59.2 0.2 29 1113-1141 7-36 (37)
175 2lt7_A Transcriptional regulat 97.4 2.2E-05 7.5E-10 78.7 -0.7 50 1082-1141 44-104 (133)
176 1yui_A GAGA-factor; complex (D 97.3 3.7E-05 1.3E-09 63.9 0.7 30 1113-1142 22-51 (54)
177 2epq_A POZ-, at HOOK-, and zin 97.3 4.6E-05 1.6E-09 60.5 1.0 31 1112-1142 7-37 (45)
178 3iuf_A Zinc finger protein UBI 97.3 4.3E-05 1.5E-09 62.0 0.8 32 1113-1144 5-37 (48)
179 1ncs_A Peptide M30F, transcrip 97.3 6.6E-05 2.3E-09 60.5 1.5 30 1113-1142 16-47 (47)
180 2eod_A TNF receptor-associated 97.3 5.7E-05 2E-09 65.4 1.0 56 1084-1141 6-63 (66)
181 2csh_A Zinc finger protein 297 97.2 0.00014 4.7E-09 69.4 3.6 53 1083-1145 32-95 (110)
182 2ab3_A ZNF29; zinc finger prot 97.2 5.8E-05 2E-09 53.3 0.6 27 1114-1140 1-29 (29)
183 2csh_A Zinc finger protein 297 97.2 6.1E-05 2.1E-09 71.9 0.9 51 1081-1142 3-64 (110)
184 1llm_C Chimera of ZIF23-GCN4; 97.2 4.7E-05 1.6E-09 69.8 0.1 45 1086-1140 1-56 (88)
185 2ee8_A Protein ODD-skipped-rel 97.2 6.9E-05 2.4E-09 70.9 1.2 50 1083-1142 12-72 (106)
186 2yt9_A Zinc finger-containing 97.2 6.8E-05 2.3E-09 69.4 1.0 27 1114-1140 64-91 (95)
187 2ct1_A Transcriptional repress 97.2 8E-05 2.7E-09 66.4 1.4 50 1082-1140 9-70 (77)
188 2wbt_A B-129; zinc finger; 2.7 97.2 6E-05 2E-09 74.2 0.2 47 1083-1141 69-126 (129)
189 2yt9_A Zinc finger-containing 97.2 0.0001 3.5E-09 68.2 1.5 49 1083-1141 2-61 (95)
190 1bhi_A CRE-BP1, ATF-2; CRE bin 97.1 8.4E-05 2.9E-09 56.5 0.7 30 1113-1142 4-35 (38)
191 2v71_A Nuclear distribution pr 97.1 0.1 3.5E-06 54.5 23.7 29 858-886 54-82 (189)
192 1fv5_A First zinc finger of U- 97.1 0.00012 4E-09 56.1 1.3 30 1111-1140 4-33 (36)
193 2dlk_A Novel protein; ZF-C2H2 97.1 9.8E-05 3.4E-09 65.8 1.0 49 1084-1142 3-67 (79)
194 2i13_A AART; DNA binding, zinc 97.1 7E-05 2.4E-09 78.9 -0.1 29 1114-1142 160-188 (190)
195 2ebt_A Krueppel-like factor 5; 97.1 9.6E-05 3.3E-09 69.0 0.8 48 1083-1140 40-100 (100)
196 2fxo_A Myosin heavy chain, car 97.1 0.041 1.4E-06 54.5 19.5 52 835-889 18-70 (129)
197 2kmk_A Zinc finger protein GFI 97.1 7.3E-05 2.5E-09 66.9 -0.4 30 1113-1142 27-56 (82)
198 2lv2_A Insulinoma-associated p 97.0 0.00026 8.9E-09 65.2 3.0 34 1109-1142 22-55 (85)
199 2eps_A POZ-, at HOOK-, and zin 97.0 0.00017 5.9E-09 59.8 1.6 32 1111-1142 8-40 (54)
200 3o0z_A RHO-associated protein 97.0 0.057 1.9E-06 55.1 20.0 73 833-908 9-82 (168)
201 2ej4_A Zinc finger protein ZIC 97.0 0.00013 4.5E-09 67.5 0.5 27 1116-1142 63-89 (95)
202 2wbs_A Krueppel-like factor 4; 97.0 0.00014 4.7E-09 66.3 0.6 47 1083-1139 30-89 (89)
203 2ent_A Krueppel-like factor 15 97.0 0.00021 7.2E-09 57.2 1.4 31 1112-1142 9-41 (48)
204 1wjp_A Zinc finger protein 295 96.9 0.00012 4.2E-09 69.5 -0.0 45 1087-1141 41-96 (107)
205 3uk3_C Zinc finger protein 217 96.9 0.00015 5.1E-09 60.3 0.1 30 1113-1142 2-31 (57)
206 2dlq_A GLI-kruppel family memb 96.9 0.00019 6.5E-09 69.5 0.8 27 1114-1140 93-120 (124)
207 1a1h_A QGSR zinc finger peptid 96.9 0.00013 4.4E-09 66.7 -0.5 30 1113-1142 32-61 (90)
208 1x5w_A Zinc finger protein 64, 96.8 0.0003 1E-08 61.4 1.5 32 1111-1142 5-36 (70)
209 1wdc_A Scallop myosin; calcium 96.8 0.0003 1E-08 61.2 1.1 48 674-721 1-51 (64)
210 2epa_A Krueppel-like factor 10 96.8 0.00029 1E-08 61.7 0.9 45 1084-1138 13-72 (72)
211 2adr_A ADR1; transcription reg 96.7 0.00032 1.1E-08 59.0 0.8 28 1114-1141 1-28 (60)
212 1ubd_C Protein (YY1 zinc finge 96.7 0.00043 1.5E-08 67.3 1.7 29 1114-1142 91-121 (124)
213 2v66_B Nuclear distribution pr 96.7 0.1 3.4E-06 49.9 17.7 100 860-995 3-102 (111)
214 1x6e_A Zinc finger protein 24; 96.7 0.00053 1.8E-08 60.1 2.2 31 1112-1142 11-41 (72)
215 2eps_A POZ-, at HOOK-, and zin 96.7 0.00065 2.2E-08 56.2 2.3 38 1081-1128 5-54 (54)
216 2jp9_A Wilms tumor 1; DNA bind 96.7 0.00024 8.2E-09 68.4 -0.5 50 1083-1142 31-93 (119)
217 2dmi_A Teashirt homolog 3; zin 96.6 0.00099 3.4E-08 63.9 3.5 30 1112-1141 77-106 (115)
218 2rpc_A Zinc finger protein ZIC 96.6 0.00043 1.5E-08 70.2 0.7 28 1114-1141 119-148 (155)
219 2dlq_A GLI-kruppel family memb 96.6 0.00044 1.5E-08 66.9 0.8 60 1083-1142 30-93 (124)
220 2lce_A B-cell lymphoma 6 prote 96.6 0.00053 1.8E-08 60.4 1.2 32 1111-1142 13-44 (74)
221 1ubd_C Protein (YY1 zinc finge 96.6 0.00059 2E-08 66.3 1.5 47 1085-1141 31-90 (124)
222 1x6f_A Zinc finger protein 462 96.6 0.0006 2E-08 63.1 1.4 32 1112-1143 22-53 (88)
223 2jp9_A Wilms tumor 1; DNA bind 96.5 0.00038 1.3E-08 67.0 0.0 46 1083-1138 61-119 (119)
224 2i13_A AART; DNA binding, zinc 96.5 0.00033 1.1E-08 73.7 -0.6 29 1113-1141 131-159 (190)
225 3na7_A HP0958; flagellar bioge 96.5 0.12 4.3E-06 57.1 19.9 14 1113-1126 220-233 (256)
226 2j7j_A Transcription factor II 96.5 0.00041 1.4E-08 62.3 -0.4 27 1114-1140 30-58 (85)
227 3oja_B Anopheles plasmodium-re 96.5 0.026 9E-07 70.1 15.9 72 929-1000 510-581 (597)
228 3vkg_A Dynein heavy chain, cyt 96.4 0.34 1.2E-05 70.0 28.4 71 932-1002 2032-2102(3245)
229 2bl0_A Major plasmodial myosin 96.4 0.0008 2.7E-08 58.3 1.3 45 677-721 2-49 (63)
230 2cot_A Zinc finger protein 435 96.4 0.0012 4.3E-08 58.5 2.6 32 1111-1142 14-45 (77)
231 3vkg_A Dynein heavy chain, cyt 96.4 0.25 8.6E-06 71.3 26.8 74 927-1000 2013-2086(3245)
232 2wbs_A Krueppel-like factor 4; 96.4 0.00079 2.7E-08 61.2 1.2 48 1085-1142 2-64 (89)
233 2efr_A General control protein 96.3 0.36 1.2E-05 48.9 20.2 61 929-989 71-131 (155)
234 2v71_A Nuclear distribution pr 96.3 0.49 1.7E-05 49.4 21.5 99 862-982 44-142 (189)
235 2dmi_A Teashirt homolog 3; zin 96.3 0.00083 2.8E-08 64.4 0.7 53 1082-1142 13-79 (115)
236 3na7_A HP0958; flagellar bioge 96.3 0.094 3.2E-06 58.1 17.4 12 1085-1096 219-230 (256)
237 1bbo_A Human enhancer-binding 96.3 0.00086 2.9E-08 55.6 0.6 27 1115-1141 1-27 (57)
238 1kk8_A Myosin heavy chain, str 96.3 0.0051 1.7E-07 78.8 7.8 47 781-827 779-828 (837)
239 1wjp_A Zinc finger protein 295 96.3 0.00058 2E-08 64.8 -0.6 60 1082-1143 10-69 (107)
240 1vd4_A Transcription initiatio 96.2 0.0009 3.1E-08 57.2 0.4 44 1082-1135 8-59 (62)
241 2d9h_A Zinc finger protein 692 96.1 0.0011 3.7E-08 59.0 0.6 30 1112-1141 4-33 (78)
242 2rpc_A Zinc finger protein ZIC 96.1 0.0015 5.2E-08 66.0 1.5 30 1113-1142 88-119 (155)
243 2efr_A General control protein 96.0 1.3 4.4E-05 44.9 22.0 56 934-989 97-152 (155)
244 2epa_A Krueppel-like factor 10 95.9 0.0027 9.1E-08 55.5 2.1 33 1110-1142 12-46 (72)
245 1llm_C Chimera of ZIF23-GCN4; 95.9 0.0014 4.6E-08 59.9 0.2 29 1113-1141 1-29 (88)
246 2drp_A Protein (tramtrack DNA- 95.9 0.0014 4.9E-08 56.1 0.0 29 1113-1141 8-38 (66)
247 3o0z_A RHO-associated protein 95.8 0.7 2.4E-05 47.2 19.5 10 981-990 122-131 (168)
248 1tf6_A Protein (transcription 95.8 0.0026 8.8E-08 66.7 1.7 27 1114-1140 133-161 (190)
249 2fxo_A Myosin heavy chain, car 95.8 0.6 2E-05 46.1 18.6 42 960-1001 80-121 (129)
250 2gqj_A Zinc finger protein KIA 95.8 0.0024 8.2E-08 59.8 1.2 31 1112-1142 21-53 (98)
251 3oja_B Anopheles plasmodium-re 95.7 0.1 3.5E-06 64.7 16.2 73 929-1001 503-575 (597)
252 2ebt_A Krueppel-like factor 5; 95.7 0.0023 7.9E-08 59.4 0.8 50 1083-1142 10-74 (100)
253 2ct1_A Transcriptional repress 95.7 0.0031 1.1E-07 55.8 1.6 29 1113-1141 13-42 (77)
254 2gli_A Protein (five-finger GL 95.7 0.003 1E-07 63.6 1.5 28 1114-1141 96-126 (155)
255 2ctd_A Zinc finger protein 512 95.6 0.0021 7.3E-08 60.3 0.3 29 1113-1142 32-61 (96)
256 2gli_A Protein (five-finger GL 95.4 0.0042 1.5E-07 62.5 1.5 28 1113-1140 126-155 (155)
257 1f2i_G Fusion of N-terminal 17 95.3 0.0042 1.4E-07 54.2 1.0 32 1111-1142 15-48 (73)
258 2epr_A POZ-, at HOOK-, and zin 95.2 0.0076 2.6E-07 48.2 2.3 33 1081-1123 5-48 (48)
259 3gn4_A Myosin-VI; unconvention 95.2 0.14 4.6E-06 51.4 11.6 54 735-802 13-66 (148)
260 1tf6_A Protein (transcription 95.0 0.0039 1.3E-07 65.3 -0.1 27 1114-1140 41-69 (190)
261 3bas_A Myosin heavy chain, str 95.0 0.35 1.2E-05 44.7 12.9 76 925-1000 11-86 (89)
262 2d9k_A FLN29 gene product; zin 95.0 0.0039 1.3E-07 55.7 -0.2 49 1082-1141 11-68 (75)
263 1x6h_A Transcriptional repress 94.9 0.0075 2.6E-07 54.1 1.6 29 1113-1141 13-41 (86)
264 2ghf_A ZHX1, zinc fingers and 94.9 0.006 2.1E-07 58.0 0.8 29 1112-1140 15-44 (102)
265 2ocy_A RAB guanine nucleotide 94.7 1.5 5.3E-05 44.2 17.8 33 973-1006 111-143 (154)
266 2eod_A TNF receptor-associated 94.5 0.0067 2.3E-07 52.1 0.1 29 1112-1142 7-35 (66)
267 3hnw_A Uncharacterized protein 94.5 0.28 9.6E-06 49.0 11.9 68 934-1001 67-134 (138)
268 1vd4_A Transcription initiatio 94.5 0.0066 2.2E-07 51.7 0.1 27 1113-1142 12-38 (62)
269 3u1c_A Tropomyosin alpha-1 cha 94.3 1.3 4.6E-05 41.7 15.4 29 966-994 68-96 (101)
270 3ec2_A DNA replication protein 94.1 0.032 1.1E-06 57.8 4.2 28 92-119 37-64 (180)
271 3gn4_A Myosin-VI; unconvention 94.0 0.063 2.2E-06 53.7 5.9 63 685-755 11-73 (148)
272 1x79_B RAB GTPase binding effe 94.0 1.2 4.2E-05 42.4 14.3 79 860-974 6-84 (112)
273 2i1j_A Moesin; FERM, coiled-co 93.9 0.074 2.5E-06 65.7 7.6 71 931-1001 387-457 (575)
274 2kxw_B Sodium channel protein 93.7 0.036 1.2E-06 39.3 2.4 22 724-745 3-24 (27)
275 2j7j_A Transcription factor II 93.6 0.011 3.8E-07 52.7 -0.3 44 1083-1139 26-85 (85)
276 2wbt_A B-129; zinc finger; 2.7 93.4 0.017 5.9E-07 56.3 0.7 26 1113-1138 72-97 (129)
277 2ocy_A RAB guanine nucleotide 93.3 3.5 0.00012 41.6 17.1 46 951-996 103-148 (154)
278 3uie_A Adenylyl-sulfate kinase 93.3 0.057 2E-06 57.1 4.6 30 89-118 21-50 (200)
279 3c8u_A Fructokinase; YP_612366 93.3 0.035 1.2E-06 59.2 3.0 30 90-119 19-48 (208)
280 2v66_B Nuclear distribution pr 93.3 4.6 0.00016 38.5 16.9 62 927-988 41-102 (111)
281 2dlk_A Novel protein; ZF-C2H2 93.2 0.024 8.2E-07 50.0 1.2 30 1112-1141 4-36 (79)
282 2l53_B CAM, voltage-gated sodi 93.2 0.059 2E-06 39.4 2.9 23 725-747 4-26 (31)
283 4eun_A Thermoresistant glucoki 93.2 0.044 1.5E-06 58.0 3.4 32 86-117 22-53 (200)
284 3u59_A Tropomyosin beta chain; 93.1 2.4 8.3E-05 39.9 14.9 30 965-994 67-96 (101)
285 2b9c_A Striated-muscle alpha t 92.9 0.65 2.2E-05 46.8 11.2 72 926-997 50-121 (147)
286 1ex7_A Guanylate kinase; subst 92.8 0.042 1.4E-06 58.0 2.6 23 95-117 3-25 (186)
287 2p65_A Hypothetical protein PF 92.7 0.14 4.9E-06 52.2 6.4 62 56-119 8-69 (187)
288 1kgd_A CASK, peripheral plasma 92.7 0.046 1.6E-06 56.9 2.6 25 93-117 5-29 (180)
289 1zr9_A Zinc finger protein 593 92.7 0.051 1.7E-06 53.2 2.7 33 1113-1145 48-80 (124)
290 2epq_A POZ-, at HOOK-, and zin 92.5 0.03 1E-06 43.8 0.7 31 1082-1122 4-45 (45)
291 1lvg_A Guanylate kinase, GMP k 92.3 0.052 1.8E-06 57.5 2.6 26 93-118 4-29 (198)
292 3hnw_A Uncharacterized protein 92.3 1.1 3.7E-05 44.7 11.9 69 927-995 67-135 (138)
293 3a00_A Guanylate kinase, GMP k 92.2 0.046 1.6E-06 57.1 2.0 25 94-118 2-26 (186)
294 1jbk_A CLPB protein; beta barr 92.2 0.11 3.7E-06 53.2 4.7 32 88-119 38-69 (195)
295 1zp6_A Hypothetical protein AT 92.2 0.063 2.2E-06 55.9 2.9 30 87-116 3-32 (191)
296 1qhx_A CPT, protein (chloramph 91.9 0.066 2.3E-06 55.0 2.7 25 93-117 3-27 (178)
297 2eyu_A Twitching motility prot 91.8 0.096 3.3E-06 58.2 4.0 36 84-120 17-52 (261)
298 3oja_A Leucine-rich immune mol 91.8 4.5 0.00015 48.6 19.2 21 860-880 367-387 (487)
299 3bos_A Putative DNA replicatio 91.7 0.15 5.2E-06 54.5 5.4 37 83-119 42-78 (242)
300 2w58_A DNAI, primosome compone 91.5 0.12 4.2E-06 54.3 4.3 26 94-119 55-80 (202)
301 3ghg_A Fibrinogen alpha chain; 91.4 3.5 0.00012 48.7 16.4 20 862-881 59-78 (562)
302 3tr0_A Guanylate kinase, GMP k 91.4 0.083 2.8E-06 55.6 2.8 26 92-117 6-31 (205)
303 2ene_A Zinc finger protein 347 91.4 0.082 2.8E-06 41.4 2.1 30 1082-1121 6-46 (46)
304 2ytg_A ZFP-95, zinc finger pro 91.4 0.094 3.2E-06 41.0 2.4 30 1082-1121 6-46 (46)
305 2em7_A Zinc finger protein 224 91.2 0.09 3.1E-06 41.1 2.2 30 1082-1121 6-46 (46)
306 2em9_A Zinc finger protein 224 91.2 0.09 3.1E-06 41.1 2.1 30 1082-1121 6-46 (46)
307 2ytn_A Zinc finger protein 347 91.2 0.085 2.9E-06 41.3 2.0 30 1082-1121 6-46 (46)
308 2kjq_A DNAA-related protein; s 91.1 0.11 3.9E-06 52.5 3.4 28 92-119 35-62 (149)
309 3tau_A Guanylate kinase, GMP k 91.1 0.079 2.7E-06 56.5 2.3 27 91-117 6-32 (208)
310 2elz_A Zinc finger protein 224 91.1 0.082 2.8E-06 41.4 1.8 30 1082-1121 6-46 (46)
311 2emf_A Zinc finger protein 484 91.1 0.095 3.3E-06 41.0 2.2 30 1082-1121 6-46 (46)
312 2el4_A Zinc finger protein 268 91.1 0.098 3.3E-06 40.8 2.3 30 1082-1121 6-46 (46)
313 1znw_A Guanylate kinase, GMP k 91.0 0.093 3.2E-06 55.8 2.7 29 89-117 16-44 (207)
314 2ysp_A Zinc finger protein 224 91.0 0.089 3E-06 41.2 1.9 30 1082-1121 6-46 (46)
315 2eq0_A Zinc finger protein 347 90.9 0.093 3.2E-06 41.0 2.0 30 1082-1121 6-46 (46)
316 2em5_A ZFP-95, zinc finger pro 90.9 0.095 3.3E-06 41.0 2.0 30 1082-1121 6-46 (46)
317 1zuh_A Shikimate kinase; alpha 90.9 0.11 3.9E-06 52.9 3.2 25 93-117 7-31 (168)
318 2eoe_A Zinc finger protein 347 90.9 0.081 2.8E-06 41.4 1.6 30 1082-1121 6-46 (46)
319 2eml_A Zinc finger protein 28 90.8 0.093 3.2E-06 41.0 1.9 30 1082-1121 6-46 (46)
320 2el6_A Zinc finger protein 268 90.8 0.09 3.1E-06 41.2 1.8 30 1082-1121 6-46 (46)
321 3t61_A Gluconokinase; PSI-biol 90.7 0.11 3.7E-06 54.9 2.9 25 93-117 18-42 (202)
322 3vaa_A Shikimate kinase, SK; s 90.7 0.12 4.2E-06 54.4 3.4 26 92-117 24-49 (199)
323 2em0_A Zinc finger protein 224 90.7 0.092 3.2E-06 41.1 1.8 30 1082-1121 6-46 (46)
324 2en1_A Zinc finger protein 224 90.7 0.1 3.6E-06 40.7 2.1 30 1082-1121 6-46 (46)
325 3asz_A Uridine kinase; cytidin 90.7 0.12 4.1E-06 54.7 3.3 28 91-118 4-31 (211)
326 3u1c_A Tropomyosin alpha-1 cha 90.7 5.9 0.0002 37.3 14.4 31 960-990 69-99 (101)
327 2epz_A Zinc finger protein 28 90.7 0.091 3.1E-06 41.1 1.7 30 1082-1121 6-46 (46)
328 2ep0_A Zinc finger protein 28 90.6 0.1 3.4E-06 40.8 2.0 30 1082-1121 6-46 (46)
329 3kb2_A SPBC2 prophage-derived 90.6 0.12 4E-06 52.6 3.0 23 95-117 3-25 (173)
330 2ema_A Zinc finger protein 347 90.6 0.1 3.4E-06 40.8 1.9 30 1082-1121 6-46 (46)
331 2ytq_A Zinc finger protein 268 90.6 0.096 3.3E-06 41.0 1.8 30 1082-1121 6-46 (46)
332 2kxw_B Sodium channel protein 90.5 0.15 5E-06 36.2 2.4 20 779-798 4-23 (27)
333 1knq_A Gluconate kinase; ALFA/ 90.5 0.15 5.1E-06 52.3 3.7 26 92-117 7-32 (175)
334 1s96_A Guanylate kinase, GMP k 90.5 0.11 3.7E-06 56.2 2.7 26 92-117 15-40 (219)
335 2eme_A Zinc finger protein 473 90.5 0.1 3.4E-06 40.8 1.8 30 1082-1121 6-46 (46)
336 2en8_A Zinc finger protein 224 90.5 0.11 3.7E-06 40.6 2.0 30 1082-1121 6-46 (46)
337 2j41_A Guanylate kinase; GMP, 90.4 0.099 3.4E-06 55.0 2.3 26 92-117 5-30 (207)
338 1m7g_A Adenylylsulfate kinase; 90.4 0.19 6.6E-06 53.4 4.5 31 88-118 20-50 (211)
339 2ytr_A Zinc finger protein 347 90.3 0.09 3.1E-06 41.1 1.4 30 1082-1121 6-46 (46)
340 3ney_A 55 kDa erythrocyte memb 90.3 0.14 4.7E-06 54.5 3.2 27 92-118 18-44 (197)
341 2yso_A ZFP-95, zinc finger pro 90.2 0.073 2.5E-06 41.7 0.8 30 1082-1121 6-46 (46)
342 2f1r_A Molybdopterin-guanine d 90.2 0.073 2.5E-06 55.3 1.0 27 94-120 3-29 (171)
343 3a7p_A Autophagy protein 16; c 90.2 2.5 8.5E-05 42.3 11.8 29 973-1001 99-127 (152)
344 2eop_A Zinc finger protein 268 90.2 0.1 3.6E-06 40.7 1.7 30 1082-1121 6-46 (46)
345 4gkw_A Spindle assembly abnorm 90.1 14 0.00047 35.6 17.6 23 862-884 13-35 (167)
346 1z6g_A Guanylate kinase; struc 90.1 0.11 3.6E-06 56.1 2.1 27 91-117 21-47 (218)
347 2l53_B CAM, voltage-gated sodi 90.0 0.25 8.5E-06 36.2 3.3 20 780-799 5-24 (31)
348 2ep2_A Zinc finger protein 484 90.0 0.12 4.1E-06 40.4 1.9 30 1082-1121 6-46 (46)
349 2epx_A Zinc finger protein 28 90.0 0.11 3.9E-06 40.6 1.7 30 1082-1121 6-47 (47)
350 2epw_A Zinc finger protein 268 90.0 0.096 3.3E-06 40.9 1.3 30 1082-1121 6-46 (46)
351 2enc_A Zinc finger protein 224 89.9 0.095 3.2E-06 41.0 1.2 30 1082-1121 6-46 (46)
352 1ye8_A Protein THEP1, hypothet 89.9 0.14 4.8E-06 53.4 2.9 23 95-117 2-24 (178)
353 1htw_A HI0065; nucleotide-bind 89.9 0.15 5.3E-06 52.1 3.1 27 91-117 31-57 (158)
354 2emm_A ZFP-95, zinc finger pro 89.8 0.088 3E-06 41.1 1.0 30 1082-1121 6-46 (46)
355 2ej4_A Zinc finger protein ZIC 89.8 0.084 2.9E-06 48.2 1.0 28 1114-1141 24-52 (95)
356 2emx_A Zinc finger protein 268 89.8 0.085 2.9E-06 40.9 0.8 30 1082-1121 4-44 (44)
357 3iij_A Coilin-interacting nucl 89.8 0.15 5.2E-06 52.6 3.0 26 92-117 10-35 (180)
358 2qor_A Guanylate kinase; phosp 89.7 0.12 4.1E-06 54.7 2.3 27 91-117 10-36 (204)
359 1kht_A Adenylate kinase; phosp 89.7 0.16 5.6E-06 52.5 3.2 26 93-118 3-28 (192)
360 2yu8_A Zinc finger protein 347 89.7 0.089 3E-06 41.2 0.9 30 1082-1121 6-46 (46)
361 2pez_A Bifunctional 3'-phospho 89.7 0.18 6.3E-06 51.9 3.6 28 92-119 4-31 (179)
362 1p9r_A General secretion pathw 89.6 0.23 7.9E-06 59.0 4.8 35 83-118 158-192 (418)
363 1odf_A YGR205W, hypothetical 3 89.6 0.18 6.2E-06 56.9 3.7 30 90-119 28-57 (290)
364 2en6_A Zinc finger protein 268 89.6 0.088 3E-06 41.2 0.8 30 1082-1121 6-46 (46)
365 2ely_A Zinc finger protein 224 89.6 0.084 2.9E-06 41.4 0.7 30 1082-1121 6-46 (46)
366 2ytd_A Zinc finger protein 473 89.6 0.094 3.2E-06 41.0 1.0 30 1082-1121 6-46 (46)
367 2eoq_A Zinc finger protein 224 89.5 0.095 3.3E-06 41.0 1.0 30 1082-1121 6-46 (46)
368 2eq4_A Zinc finger protein 224 89.5 0.091 3.1E-06 41.0 0.8 30 1082-1121 6-46 (46)
369 1rz3_A Hypothetical protein rb 89.5 0.2 6.9E-06 52.9 3.8 31 91-121 20-50 (201)
370 1wt6_A Myotonin-protein kinase 89.5 2 7E-05 38.2 9.3 61 939-999 14-74 (81)
371 2ytj_A Zinc finger protein 484 89.5 0.11 3.8E-06 40.6 1.3 30 1082-1121 6-46 (46)
372 2rhm_A Putative kinase; P-loop 89.4 0.19 6.5E-06 52.1 3.4 26 92-117 4-29 (193)
373 3jvv_A Twitching mobility prot 89.3 0.23 7.7E-06 57.8 4.3 36 84-120 115-150 (356)
374 2emy_A Zinc finger protein 268 89.3 0.098 3.3E-06 40.9 0.9 30 1082-1121 6-46 (46)
375 2ytk_A Zinc finger protein 347 89.3 0.096 3.3E-06 41.0 0.8 30 1082-1121 6-46 (46)
376 2eov_A Zinc finger protein 484 89.1 0.095 3.2E-06 40.9 0.7 30 1082-1121 6-46 (46)
377 1np6_A Molybdopterin-guanine d 89.1 0.19 6.6E-06 52.3 3.2 28 94-121 7-34 (174)
378 1ic2_A Tropomyosin alpha chain 89.0 4.6 0.00016 36.4 11.8 66 927-999 5-70 (81)
379 1gvn_B Zeta; postsegregational 89.0 0.35 1.2E-05 54.4 5.5 26 92-117 32-57 (287)
380 1x6f_A Zinc finger protein 462 89.0 0.035 1.2E-06 51.1 -2.3 47 1082-1142 19-76 (88)
381 3aez_A Pantothenate kinase; tr 89.0 0.21 7.2E-06 56.9 3.7 30 90-119 87-116 (312)
382 1nks_A Adenylate kinase; therm 89.0 0.16 5.6E-06 52.4 2.6 24 95-118 3-26 (194)
383 2em8_A Zinc finger protein 224 89.0 0.092 3.2E-06 41.1 0.5 30 1082-1121 6-46 (46)
384 2emp_A Zinc finger protein 347 88.9 0.091 3.1E-06 41.1 0.4 30 1082-1121 6-46 (46)
385 2eoo_A ZFP-95, zinc finger pro 88.9 0.091 3.1E-06 41.2 0.4 30 1082-1121 6-46 (46)
386 2emk_A Zinc finger protein 28 88.9 0.1 3.4E-06 40.9 0.6 30 1082-1121 6-46 (46)
387 2ep3_A Zinc finger protein 484 88.9 0.17 5.7E-06 39.5 2.0 30 1082-1121 6-46 (46)
388 1sq5_A Pantothenate kinase; P- 88.9 0.31 1.1E-05 55.3 5.0 28 91-118 78-105 (308)
389 3cr8_A Sulfate adenylyltranfer 88.8 0.18 6E-06 62.1 3.1 30 91-120 367-396 (552)
390 2oqq_A Transcription factor HY 88.8 0.87 3E-05 35.2 5.6 34 972-1006 5-38 (42)
391 1ic2_A Tropomyosin alpha chain 88.7 5 0.00017 36.1 11.9 62 933-1001 4-65 (81)
392 3tqf_A HPR(Ser) kinase; transf 88.7 0.2 6.7E-06 52.1 2.8 24 92-115 15-38 (181)
393 2chg_A Replication factor C sm 88.7 0.33 1.1E-05 50.8 4.7 35 84-118 29-63 (226)
394 2emh_A Zinc finger protein 484 88.7 0.092 3.2E-06 41.1 0.3 30 1082-1121 6-46 (46)
395 1njg_A DNA polymerase III subu 88.6 0.42 1.4E-05 50.5 5.6 31 89-119 41-71 (250)
396 2bdt_A BH3686; alpha-beta prot 88.6 0.2 6.9E-06 52.1 3.0 22 94-115 3-24 (189)
397 1kag_A SKI, shikimate kinase I 88.6 0.17 5.8E-06 51.6 2.4 25 93-117 4-28 (173)
398 1gtv_A TMK, thymidylate kinase 88.6 0.11 3.8E-06 55.0 0.9 25 95-119 2-26 (214)
399 4gp7_A Metallophosphoesterase; 88.6 0.24 8.4E-06 50.9 3.5 21 92-112 8-28 (171)
400 2bbw_A Adenylate kinase 4, AK4 88.6 0.22 7.7E-06 54.3 3.4 32 84-117 20-51 (246)
401 2ytm_A Zinc finger protein 28 88.5 0.086 2.9E-06 41.4 -0.0 30 1082-1121 6-46 (46)
402 1l8q_A Chromosomal replication 88.5 0.32 1.1E-05 55.2 4.8 46 73-120 17-64 (324)
403 2jee_A YIIU; FTSZ, septum, coi 88.5 6.1 0.00021 35.5 11.8 64 926-996 11-74 (81)
404 2ewv_A Twitching motility prot 88.4 0.24 8.1E-06 58.0 3.7 31 90-120 133-163 (372)
405 3lnc_A Guanylate kinase, GMP k 88.4 0.18 6.3E-06 54.4 2.5 26 92-117 26-52 (231)
406 3cve_A Homer protein homolog 1 88.3 5.1 0.00018 35.2 11.0 45 926-970 5-49 (72)
407 3e70_C DPA, signal recognition 88.3 0.29 1E-05 56.2 4.3 33 90-122 126-158 (328)
408 3trf_A Shikimate kinase, SK; a 88.3 0.23 7.9E-06 51.3 3.2 25 93-117 5-29 (185)
409 1cke_A CK, MSSA, protein (cyti 88.3 0.24 8.1E-06 53.0 3.3 25 93-117 5-29 (227)
410 1ofh_A ATP-dependent HSL prote 88.3 0.45 1.5E-05 53.2 5.7 27 91-117 48-74 (310)
411 3bas_A Myosin heavy chain, str 88.3 2.1 7.1E-05 39.4 9.1 64 835-901 19-83 (89)
412 1xjc_A MOBB protein homolog; s 88.2 0.26 9E-06 51.0 3.4 28 94-121 5-32 (169)
413 3lw7_A Adenylate kinase relate 88.1 0.18 6.2E-06 50.9 2.2 21 95-116 3-23 (179)
414 2ytt_A Zinc finger protein 473 88.1 0.086 2.9E-06 41.3 -0.2 31 1081-1121 5-46 (46)
415 1sxj_C Activator 1 40 kDa subu 87.9 0.5 1.7E-05 54.1 6.0 57 60-118 15-71 (340)
416 2jaq_A Deoxyguanosine kinase; 87.8 0.24 8.1E-06 51.8 2.9 24 95-118 2-25 (205)
417 1svm_A Large T antigen; AAA+ f 87.8 0.51 1.7E-05 55.2 5.9 47 71-117 146-193 (377)
418 1e6c_A Shikimate kinase; phosp 87.8 0.25 8.4E-06 50.3 2.9 23 95-117 4-26 (173)
419 2e72_A POGO transposable eleme 87.7 0.23 7.8E-06 39.7 1.9 26 1114-1139 11-36 (49)
420 2pt5_A Shikimate kinase, SK; a 87.7 0.25 8.6E-06 50.1 2.9 23 95-117 2-24 (168)
421 3swk_A Vimentin; cytoskeleton, 87.7 8.3 0.00028 35.2 12.6 79 926-1005 5-83 (86)
422 2yvu_A Probable adenylyl-sulfa 87.6 0.31 1.1E-05 50.5 3.7 29 92-120 12-40 (186)
423 2v9p_A Replication protein E1; 87.6 0.28 9.6E-06 55.7 3.5 29 89-117 122-150 (305)
424 2eqb_B RAB guanine nucleotide 87.6 15 0.00052 34.0 14.2 91 861-990 6-96 (97)
425 3u59_A Tropomyosin beta chain; 87.6 11 0.00037 35.4 13.9 26 965-990 74-99 (101)
426 2d9k_A FLN29 gene product; zin 87.6 0.15 5.2E-06 45.2 1.0 30 1112-1143 14-43 (75)
427 2jeo_A Uridine-cytidine kinase 87.5 0.32 1.1E-05 53.1 3.8 27 91-117 23-49 (245)
428 3cm0_A Adenylate kinase; ATP-b 87.4 0.28 9.6E-06 50.6 3.2 25 93-117 4-28 (186)
429 1rj9_A FTSY, signal recognitio 87.4 0.32 1.1E-05 55.2 3.8 30 92-121 101-130 (304)
430 3b9q_A Chloroplast SRP recepto 87.2 0.36 1.2E-05 54.7 4.1 30 92-121 99-128 (302)
431 2iyv_A Shikimate kinase, SK; t 87.2 0.28 9.5E-06 50.7 2.9 23 95-117 4-26 (184)
432 1iqp_A RFCS; clamp loader, ext 87.2 0.85 2.9E-05 51.2 7.2 57 60-118 15-71 (327)
433 1via_A Shikimate kinase; struc 87.1 0.28 9.6E-06 50.3 2.9 23 95-117 6-28 (175)
434 1fnn_A CDC6P, cell division co 87.0 0.59 2E-05 54.0 5.9 37 82-118 31-69 (389)
435 1d2n_A N-ethylmaleimide-sensit 87.0 0.5 1.7E-05 52.2 5.1 28 90-117 61-88 (272)
436 2gks_A Bifunctional SAT/APS ki 87.0 0.39 1.3E-05 59.0 4.5 50 70-119 345-398 (546)
437 3n70_A Transport activator; si 87.0 0.23 7.9E-06 49.6 2.1 25 91-115 22-46 (145)
438 2gza_A Type IV secretion syste 87.0 0.15 5.2E-06 59.3 0.8 27 92-118 174-200 (361)
439 2z0h_A DTMP kinase, thymidylat 86.8 0.29 1E-05 50.8 2.9 26 95-120 2-27 (197)
440 2jee_A YIIU; FTSZ, septum, coi 86.8 8.4 0.00029 34.6 11.7 68 937-1004 8-75 (81)
441 2em2_A Zinc finger protein 28 86.8 0.18 6.2E-06 39.4 1.0 30 1082-1121 6-46 (46)
442 2ycu_A Non muscle myosin 2C, a 86.8 0.18 6.2E-06 66.1 1.5 41 784-824 767-807 (995)
443 4e22_A Cytidylate kinase; P-lo 86.7 0.3 1E-05 53.7 3.0 27 91-117 25-51 (252)
444 2qby_B CDC6 homolog 3, cell di 86.7 0.56 1.9E-05 54.2 5.5 39 82-120 34-72 (384)
445 1ly1_A Polynucleotide kinase; 86.7 0.32 1.1E-05 49.6 3.1 22 94-115 3-24 (181)
446 1qf9_A UMP/CMP kinase, protein 86.6 0.29 9.8E-06 50.6 2.6 25 93-117 6-30 (194)
447 3q8t_A Beclin-1; autophagy, AT 86.5 11 0.00039 35.0 13.2 75 927-1001 10-84 (96)
448 3tlx_A Adenylate kinase 2; str 86.5 0.78 2.7E-05 50.0 6.2 28 90-117 26-53 (243)
449 2v4h_A NF-kappa-B essential mo 86.5 7.6 0.00026 36.7 11.7 21 980-1000 86-106 (110)
450 2vp4_A Deoxynucleoside kinase; 86.4 0.18 6.3E-06 54.5 1.1 26 91-116 18-43 (230)
451 3fb4_A Adenylate kinase; psych 86.4 0.32 1.1E-05 51.7 2.9 22 96-117 3-24 (216)
452 2qt1_A Nicotinamide riboside k 86.3 0.23 7.9E-06 52.5 1.7 26 92-117 20-45 (207)
453 3ol1_A Vimentin; structural ge 86.2 11 0.00039 36.4 13.6 67 927-993 26-99 (119)
454 3tif_A Uncharacterized ABC tra 86.2 0.29 9.9E-06 53.4 2.5 27 91-117 29-55 (235)
455 3a7p_A Autophagy protein 16; c 86.2 8.8 0.0003 38.4 12.7 67 927-993 67-133 (152)
456 3pvs_A Replication-associated 86.1 0.56 1.9E-05 56.2 5.1 107 61-180 17-125 (447)
457 2bwj_A Adenylate kinase 5; pho 86.0 0.32 1.1E-05 50.7 2.6 26 93-118 12-37 (199)
458 2pbr_A DTMP kinase, thymidylat 86.0 0.35 1.2E-05 50.1 2.9 25 95-119 2-26 (195)
459 3te6_A Regulatory protein SIR3 86.0 0.52 1.8E-05 53.8 4.5 37 84-120 36-72 (318)
460 2w0m_A SSO2452; RECA, SSPF, un 86.0 0.49 1.7E-05 50.3 4.2 30 92-121 22-51 (235)
461 3nwj_A ATSK2; P loop, shikimat 85.9 0.33 1.1E-05 53.5 2.8 25 93-117 48-72 (250)
462 1a7j_A Phosphoribulokinase; tr 85.9 0.31 1.1E-05 54.9 2.6 26 93-118 5-30 (290)
463 2b9c_A Striated-muscle alpha t 85.8 6.1 0.00021 39.7 11.7 49 928-976 73-121 (147)
464 2i3b_A HCR-ntpase, human cance 85.8 0.39 1.3E-05 50.6 3.2 25 94-118 2-26 (189)
465 1sxj_E Activator 1 40 kDa subu 85.8 0.23 7.8E-06 57.0 1.5 22 96-117 39-60 (354)
466 3ake_A Cytidylate kinase; CMP 85.8 0.36 1.2E-05 50.6 2.9 23 95-117 4-26 (208)
467 2c95_A Adenylate kinase 1; tra 85.7 0.4 1.4E-05 49.7 3.2 26 92-117 8-33 (196)
468 2e7s_A RAB guanine nucleotide 85.7 1.8 6E-05 42.7 7.4 128 839-1006 3-131 (135)
469 3q8t_A Beclin-1; autophagy, AT 85.6 14 0.00049 34.3 13.3 71 931-1001 7-77 (96)
470 2og2_A Putative signal recogni 85.6 0.49 1.7E-05 55.0 4.2 47 75-121 128-185 (359)
471 1lv7_A FTSH; alpha/beta domain 85.6 0.4 1.4E-05 52.5 3.2 26 92-117 44-69 (257)
472 1zd8_A GTP:AMP phosphotransfer 85.5 0.31 1.1E-05 52.4 2.3 26 92-117 6-31 (227)
473 2p5t_B PEZT; postsegregational 85.5 0.35 1.2E-05 53.1 2.8 27 91-117 30-56 (253)
474 1uf9_A TT1252 protein; P-loop, 85.4 0.4 1.4E-05 50.1 3.1 26 91-116 6-31 (203)
475 2plr_A DTMP kinase, probable t 85.4 0.46 1.6E-05 49.9 3.6 26 93-118 4-29 (213)
476 1jr3_A DNA polymerase III subu 85.4 1.3 4.3E-05 51.0 7.6 55 61-118 7-63 (373)
477 2ehv_A Hypothetical protein PH 85.3 0.46 1.6E-05 51.3 3.6 27 92-118 29-55 (251)
478 4a74_A DNA repair and recombin 85.3 0.37 1.3E-05 51.3 2.8 26 92-117 24-49 (231)
479 2yhs_A FTSY, cell division pro 85.2 0.52 1.8E-05 56.9 4.2 48 75-122 266-322 (503)
480 2vli_A Antibiotic resistance p 85.2 0.33 1.1E-05 49.8 2.3 25 93-117 5-29 (183)
481 1g8f_A Sulfate adenylyltransfe 85.2 0.47 1.6E-05 57.6 3.9 47 71-119 375-421 (511)
482 1tev_A UMP-CMP kinase; ploop, 85.1 0.47 1.6E-05 49.0 3.4 25 93-117 3-27 (196)
483 2wwf_A Thymidilate kinase, put 85.1 0.43 1.5E-05 50.2 3.2 27 93-119 10-36 (212)
484 2ent_A Krueppel-like factor 15 85.1 0.38 1.3E-05 37.7 2.1 30 1082-1121 6-48 (48)
485 3s4r_A Vimentin; alpha-helix, 85.0 6.5 0.00022 36.4 10.6 25 926-950 21-45 (93)
486 3cvf_A Homer-3, homer protein 85.0 8.2 0.00028 34.5 10.7 44 927-970 12-55 (79)
487 2qz4_A Paraplegin; AAA+, SPG7, 85.0 0.48 1.7E-05 51.6 3.6 27 91-117 37-63 (262)
488 1zak_A Adenylate kinase; ATP:A 84.9 0.38 1.3E-05 51.4 2.6 25 94-118 6-30 (222)
489 3a4m_A L-seryl-tRNA(SEC) kinas 84.9 0.44 1.5E-05 52.6 3.2 28 93-120 4-31 (260)
490 3dl0_A Adenylate kinase; phosp 84.9 0.34 1.2E-05 51.5 2.2 23 95-117 2-24 (216)
491 2cdn_A Adenylate kinase; phosp 84.9 0.51 1.7E-05 49.5 3.6 28 90-117 17-44 (201)
492 3cvf_A Homer-3, homer protein 84.8 3.4 0.00011 37.0 8.1 58 944-1001 8-65 (79)
493 1nn5_A Similar to deoxythymidy 84.7 0.48 1.6E-05 50.0 3.3 28 92-119 8-35 (215)
494 2z4s_A Chromosomal replication 84.7 0.71 2.4E-05 55.1 5.1 40 81-120 117-157 (440)
495 1vma_A Cell division protein F 84.6 0.59 2E-05 53.1 4.2 46 76-121 79-132 (306)
496 1nij_A Hypothetical protein YJ 84.5 0.42 1.4E-05 54.5 2.9 23 94-116 5-27 (318)
497 2oap_1 GSPE-2, type II secreti 84.3 0.41 1.4E-05 58.3 2.8 25 93-117 260-284 (511)
498 3uk6_A RUVB-like 2; hexameric 84.2 0.85 2.9E-05 52.5 5.4 45 73-117 49-94 (368)
499 2ze6_A Isopentenyl transferase 84.2 0.45 1.5E-05 52.3 2.9 22 96-117 4-25 (253)
500 1y63_A LMAJ004144AAA protein; 84.1 0.55 1.9E-05 48.7 3.4 26 91-116 8-33 (184)
No 1
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=100.00 E-value=1.5e-222 Score=2145.02 Aligned_cols=940 Identities=39% Similarity=0.640 Sum_probs=812.9
Q ss_pred CCCCCccCCCCCChHHHHHHHHHHh-hcCceeeeccCeeEeeCCCCCCCCCCcHHHHHHhcCCCCCCCCchHHHHHHHHH
Q 048174 6 GGADDMTKLSYLHEPGVLHNLATRY-EINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGVPFGKLSPHVFAIADAAY 84 (1303)
Q Consensus 6 ~~~~Dl~~L~~l~E~~vL~~L~~Ry-~~~~iYT~~G~iLiavNP~~~l~~ly~~~~~~~y~~~~~~~~~PHifavA~~Ay 84 (1303)
.++|||+.|++|||++||+||+.|| ..+.||||+|+||||||||+.+| +|+++++..|+|+..+++||||||||+.||
T Consensus 69 ~~~~Dl~~L~~l~e~~vl~nL~~Ry~~~~~iYTy~G~iLiavNPyk~l~-iy~~~~~~~Y~~~~~~~~pPHifaiA~~Ay 147 (1080)
T 2dfs_A 69 VGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP-IYGEDIINAYSGQNMGDMDPHIFAVAEEAY 147 (1080)
T ss_dssp SSCSBSTTCSSCSHHHHHHHHHHHHHTTCCCEEEETTEEEEECCSSCCS-CSSHHHHHHHTTCCGGGSCCCHHHHHHHHH
T ss_pred cchhhhhhhhhcchHHHHHHHHHHHHhcCCchhccCceeEEecCCcccc-cCCHHHHHHhcCCCCCCCCCcHHHHHHHHH
Confidence 6899999999999999999999999 99999999999999999999998 999999999999999999999999999999
Q ss_pred HHHHHcCCCeEEEEeCCcCCCchhhHHHHHHHHHHHhCCCCcCCCcHHHHHHhhchHHHhhcccccccCCCCCcccceEE
Q 048174 85 REMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAAEGRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVE 164 (1303)
Q Consensus 85 ~~m~~~~~~QsIiisGESGaGKTe~~k~i~~yLa~~~~~~~~~~~~ie~~il~snpiLEAFGNAkT~rN~NSSRfGK~i~ 164 (1303)
++|+.+++||||||||||||||||++|+||+|||++++... ..+|+++|+++||||||||||||+||||||||||||+
T Consensus 148 ~~m~~~~~~QsIiisGESGAGKTe~~K~i~~yla~~~~~~~--~~~ie~~il~snpiLEAFGNAkT~rN~NSSRFGK~i~ 225 (1080)
T 2dfs_A 148 KQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGSAS--EANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIE 225 (1080)
T ss_dssp HHHHHHTCCEEEEEECSTTSSHHHHHHHHHHHHHHTTTCCT--TTCTHHHHHHHHHHHHHHHEEEETTEEEEECSEEEEE
T ss_pred HHHHhcCCCcEEEEcCCCCCCccchHHHHHHHHHhhccCCC--ccchHHHHHHHHHHHHHhcCCcCCCCCCccccceeEE
Confidence 99999999999999999999999999999999999986532 3589999999999999999999999999999999999
Q ss_pred EEEcCCCCeeeeEEeeeeecccceeecCCCCCceeeeeeccc-CChhhHhhcCCCCCCCCccccCCCcccccCCCCHHHH
Q 048174 165 IQFDKRGRISGAAIRTYLLERSRVCKISDPERNYHCFYLLCA-APPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDY 243 (1303)
Q Consensus 165 l~f~~~g~i~Ga~i~~yLLEksRvv~q~~~ERNfHIFYqll~-~~~~~~~~l~L~~~~~~~yl~~~~~~~~~~~dd~~~f 243 (1303)
|+||.+|.|+||+|.+|||||||||+|++||||||||||||+ +++++++.|+|.+|.+|+||++|+|..++|+||+++|
T Consensus 226 i~F~~~g~i~Ga~i~~yLLEKsRVv~q~~~ERnfHIFYqllag~~~~~~~~l~L~~~~~y~yl~~~~~~~~~~~dD~~~f 305 (1080)
T 2dfs_A 226 IGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEM 305 (1080)
T ss_dssp EEECTTCCEEEEEEEEECCCCGGGTCCCTTCCSBHHHHHHHHTTTSSGGGGTCCCCTTTCTTTSTTSCCSCTTCCHHHHH
T ss_pred EEECCCCCEeeecceeEeecCceeeccCCCCCcchhHHHHHcCCChHHHHHccCCCHHhcCcccCCCCCCCCCccHHHHH
Confidence 999999999999999999999999999999999999999999 6788999999999999999999999999999999999
Q ss_pred HHHHhhhhhccCCHHHHHHHHHHHHHHHHhcCeeeeecCCccceecCcccHHHHHHHHHhcCCCHHHHHHHHhhceeeeC
Q 048174 244 LATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLLMCDPGELEDALCKRVMITP 323 (1303)
Q Consensus 244 ~~~~~Al~~lG~~~~~~~~I~~ilaaILhLGni~F~~~~~d~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~L~~~~~~~~ 323 (1303)
..|+.||++|||+++++.+||+|||||||||||+|...+++.+.+.+ +...++.||.||||++++|.++||++++.++
T Consensus 306 ~~~~~A~~~lg~~~~e~~~i~~ilaaILhLGni~F~~~~~~~~~~~~--~~~~l~~~a~LLgv~~~~L~~~l~~~~~~~~ 383 (1080)
T 2dfs_A 306 VNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPP--KHDPLTIFCDLMGVDYEEMAHWLCHRKLATA 383 (1080)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCCEEETTTEEECCS--SCHHHHHHHHHHTCCHHHHHHHHHEEEECC-
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCceEEecCCcceeecC--ChHHHHHHHHHhCCCHHHHHHHhcccEEEeC
Confidence 99999999999999999999999999999999999887666555532 2357999999999999999999999999999
Q ss_pred CceeeccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcCCCCceEEEeeeccccccCCCCCHHHHHHHhhhHHHHh
Q 048174 324 EEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIGQDPHSKCLIGVLDIYGFESFESNSFEQFCINFTNEKLQQ 403 (1303)
Q Consensus 324 ~e~i~~~l~~~~A~~~Rdalak~LY~~LF~wiV~~iN~~l~~~~~~~~~IgiLDI~GFE~f~~NsfEQlcINyaNEkLq~ 403 (1303)
+|.|+++++++||.++||||||+||++||+|||.+||.+|..+.....+||||||||||+|+.|||||||||||||+|||
T Consensus 384 ~e~i~~~~~~~qa~~~rdalak~lY~~LF~wlV~~iN~~l~~~~~~~~~IgvLDI~GFE~f~~NsFEQlcINy~NEkLQq 463 (1080)
T 2dfs_A 384 TETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQ 463 (1080)
T ss_dssp ---EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCCCEEEEEEEECCCCCCSSBCHHHHHHHHHHHHHHH
T ss_pred CceEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCceEEeeccCCccccCcCCHHHHHHHhhhHHHHH
Confidence 99999999999999999999999999999999999999999877678999999999999999999999999999999999
Q ss_pred HHhHhhHHhhHhhhhccCCCcccccccChHHHHHhhhcCCCcccccchhhhcCCCCchHHHHHHHHHHh-cCCCCcccCC
Q 048174 404 HFNQNVFKMEQNDYRNEEIDWSYVHFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKPK 482 (1303)
Q Consensus 404 ~f~~~vf~~eq~ey~~EgI~w~~i~~~dn~~~ldlie~~p~Gil~lLdee~~~p~~td~~f~~kl~~~~-~~~~~f~~p~ 482 (1303)
+||+|||+.||+||.+|||+|.+|+|.||++|||||+++ .|||+||||||++|++||++|++||+..| ++|++|.+|+
T Consensus 464 ~F~~~~f~~EqeeY~~EgI~w~~i~f~dn~~~idlie~~-~Gil~lLdee~~~p~~tD~~f~~kl~~~~~~~~~~f~~p~ 542 (1080)
T 2dfs_A 464 QFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPR 542 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTCCCCCCCHHHHHHHHST-TSHHHHHHHHTTSTTCCHHHHHHHHHHHHBTTBSSEECCT
T ss_pred HHHHHhhHHHHHHHhhcCCccccccccccHHHHHHHhcC-CceeeeccccccCCCCChHHHHHHHHHHhhcCCCCccCCC
Confidence 999999999999999999999999999999999999987 79999999999999999999999999998 9999999999
Q ss_pred CCCCCcEEEccCCCcchhhhhhhhhccchhHHHHHHHHhhc-hhhhhhccCCCCccc-----------------------
Q 048174 483 LTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSAS-ECSFVSGLFPPISEE----------------------- 538 (1303)
Q Consensus 483 ~~~~~F~I~HyaG~V~Y~~~gflekN~D~l~~~~~~ll~~S-~~~~i~~lf~~~~~~----------------------- 538 (1303)
.+...|+|+||||+|+|+++|||+||+|.|+++++.||++| +++||+.||+.....
T Consensus 543 ~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~~v~~lf~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 622 (1080)
T 2dfs_A 543 LSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAK 622 (1080)
T ss_dssp TCSSEEEEECSSCEEEEECTTHHHHHBCCCCHHHHHHHHTCSSCSHHHHSCC----------------------------
T ss_pred CCCCceEEEecceEEEEehhhHHHhccccccHHHHHHHHcccccHHHHHHhccccccccccccccccccccccccccccc
Confidence 88899999999999999999999999999999999999999 999999999853210
Q ss_pred ----ccCCCCccchhHhhHhhHHHHHHHHccCCCeeEEecCCCCCCCCCcCCccccccceecccHHHHHHHHhhCCCccc
Q 048174 539 ----TTKSSKFSSIGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRK 614 (1303)
Q Consensus 539 ----~~~~~~~~tv~~~fk~sL~~Lm~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gvle~iri~~~Gyp~r~ 614 (1303)
..+..+++||+++|+.||+.||++|++|+||||||||||+.+.|+.||..+|++||||+||||+|||+++|||+|+
T Consensus 623 ~~~~~~~~~~~~tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~ 702 (1080)
T 2dfs_A 623 ARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRW 702 (1080)
T ss_dssp ---------CCCBHHHHHHHHHHHHHHHHHSSEEEEEEEECCCSSCCTTCCCHHHHHHHHHTTTHHHHHHHHTTSCCEEE
T ss_pred ccccccccCCCCcHHHHHHHHHHHHHHHHHhcCCeeEEEecCCCCCCchhcCHHhhHHHHhhcccHHHHhHHhcCCCchh
Confidence 0122367899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHhhcccccchhccccchHHHHHHHHHhcCC--CCcccccccceeccchhhHHHHHHHhhhchhHHHHhhhhhhh
Q 048174 615 TFSEFLDRFGILLPEIRKQNYDEKIACKWILEKMDL--KGYQIGKTKVFLKAGQMAELDAKRAKLLGHSAEVIQSQHRRR 692 (1303)
Q Consensus 615 ~~~eF~~Ry~~L~~~~~~~~~~~~~~~~~il~~~~~--~~~~iGkTkVFlr~~~~~~LE~~R~~~l~~aA~~IQ~~~R~~ 692 (1303)
+|.+|+.||++|+|...... |++++|+.||..+++ +.|+||+||||||++++..||.+|...+..+|+.||++||+|
T Consensus 703 ~~~eF~~RY~~L~~~~~~~~-d~k~~~~~il~~~~~~~~~~~~G~TKVF~r~g~l~~LE~~R~~~l~~aa~~IQa~~Rg~ 781 (1080)
T 2dfs_A 703 TYQEFFSRYRVLMKQKDVLS-DRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGW 781 (1080)
T ss_dssp EHHHHHHHHTTTSCGGGCCS-SHHHHHHHHHTTTSCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCccCCCC-ChHHHHHHHHHHhcCChhhheeccccchhccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999765544 889999999998865 489999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhHHHHHHhhccccceeccccccchhhhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHH
Q 048174 693 VTQKHYITLVQAAVCIQSSCRGILARRYCKVKKKEAAAVKIQKNSRTMMTRKAYSNVKAAAIVLQAWLRARAAVRAMAAL 772 (1303)
Q Consensus 693 ~~Rk~y~~~r~aai~IQa~~Rg~laRk~~~~~r~~~AAi~IQ~~~Rg~~aRr~~~k~r~aai~IQ~~~R~~~~~R~~~ar 772 (1303)
++|++|.+++.|++.||++|||+++|+.++.+|+..||++||++||||++|+.|.+++.+++.||++||++ .+|
T Consensus 782 l~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~lr~~~AAi~IQs~~Rg~~~Rk~y~~lr~aai~IQs~~Rg~------laR 855 (1080)
T 2dfs_A 782 LMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGY------LVR 855 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHH
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH------HHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999955555 555
Q ss_pred HHHHHHHhHHHHHHHHHHHhhHHHHHHHHHHhhhhHHhhhhhhhHHHHHHHHHHHHHHHHHH--------HHHHHHHH-H
Q 048174 773 SELRHRKHAKGALSIQTSWRGHRDFSYYKRLRKASVFSQSRWRGIAARREFRKLKMTAKKEE--------RGQEITES-Q 843 (1303)
Q Consensus 773 r~~~~~~~~~AA~~IQ~~~Rg~~aRr~~~~~~kaav~IQ~~~R~~~aRkel~~lk~aa~~~~--------LE~kl~eL-~ 843 (1303)
+.+..++++.||+.||++||||++|+.|.+.+++++.||++||++++|+++++++.+++..+ ||+++.+| +
T Consensus 856 r~~~~lr~~~aav~IQ~~~Rg~l~R~~y~~~~~aai~iQs~~R~~laRr~~~~Lk~ear~~~~l~~~~~~LE~kl~eLq~ 935 (1080)
T 2dfs_A 856 NKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQR 935 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHTTTC--------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 55566666789999999999999999999999999999999999999999999998887533 89999999 9
Q ss_pred hhHHHHHhhhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhhcchhhhhhccCCCccCcccC
Q 048174 844 ESQEAVQYIVD-ETSEVKECDITNKGIEVHVKECDTTDRAIEVYVKECDTKDRATEVHVEDCDDIDRAIEPHPITGKIPC 922 (1303)
Q Consensus 844 rLe~ee~~r~e-ee~~~~E~~kL~~~ve~Le~qlee~e~~~~~le~e~~~~~~~~~~~~ee~~~~k~~l~e~~~~~e~~~ 922 (1303)
+++++++.+.+ .+.+.....+++.++..|++++++++.. ++|+.
T Consensus 936 rL~~~e~~n~~L~~~~~~~~~~~~~e~~~L~~~l~~le~~----~~e~~------------------------------- 980 (1080)
T 2dfs_A 936 KIDEQNKEYKSLLEKMNNLEITYSTETEKLRSDVERLRMS----EEEAK------------------------------- 980 (1080)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHTHHHHHHH----HHHHH-------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH----HHHHH-------------------------------
Confidence 99876666655 2222333456666666666666666532 22211
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 923 SNEEEEKIENLSAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRLLYCMSEQFS 998 (1303)
Q Consensus 923 ~~~~~~ki~~L~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl~~le~ 998 (1303)
..+.++..|++|+++|+.+++++.+..+++++++.++++ ++.+++.+++.++..|++++.+|+..+...++
T Consensus 981 --~~~~~v~~L~~e~~~l~~~~~~~~ke~~~lee~~~~~~~---~L~~kv~~L~~e~~~L~qq~~~l~~~~~~~~~ 1051 (1080)
T 2dfs_A 981 --NATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKH---ETEQLVSELKEQNTLLKTEKEELNRRIHDQAK 1051 (1080)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123445555555555555555555555555555544442 33355555555555555555555544444433
No 2
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=100.00 E-value=3.1e-198 Score=1959.67 Aligned_cols=718 Identities=38% Similarity=0.668 Sum_probs=661.6
Q ss_pred CCCCCccCCCCCChHHHHHHHHHHhhcCceeeeccCeeEeeCCCCCCCCCCcHHHHHHhcCCCCCCCCchHHHHHHHHHH
Q 048174 6 GGADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGVPFGKLSPHVFAIADAAYR 85 (1303)
Q Consensus 6 ~~~~Dl~~L~~l~E~~vL~~L~~Ry~~~~iYT~~G~iLiavNP~~~l~~ly~~~~~~~y~~~~~~~~~PHifavA~~Ay~ 85 (1303)
.++|||+.|++|||++|||||+.||..+.||||+|+||||||||+++| +|+++++..|+++..+++||||||||+.||+
T Consensus 83 ~~~~Dl~~l~~l~e~~vl~~L~~Ry~~~~iyT~~g~~li~vNP~~~l~-~y~~~~~~~y~~~~~~~~~PHi~aia~~ay~ 161 (1184)
T 1i84_S 83 SKVEDMAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEMPPHIYAIADTAYR 161 (1184)
T ss_dssp TTCSBTTSSSCCCTTHHHHHHHHHHHHTCCEEEETTEEEEECCCSCCS-CCSHHHHHHHSSCCSSSSCCCHHHHHHHHHH
T ss_pred cccchhhhhccccHHHHHHHHHHHhcCCCcEEecCcceeeeCCCcCCC-CCCHHHHHHhcCcccccCCccHhhhHHHHHH
Confidence 589999999999999999999999999999999999999999999998 9999999999999999999999999999999
Q ss_pred HHHHcCCCeEEEEeCCcCCCchhhHHHHHHHHHHHhCCCCcC------------CCcHHHHHHhhchHHHhhcccccccC
Q 048174 86 EMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAAE------------GRSVEQQVLESNPVLEAFGNAKTVKN 153 (1303)
Q Consensus 86 ~m~~~~~~QsIiisGESGaGKTe~~k~i~~yLa~~~~~~~~~------------~~~ie~~il~snpiLEAFGNAkT~rN 153 (1303)
+|+.+++||||||||||||||||++|+||+|||++++..... ..+|+++|+++||||||||||||+||
T Consensus 162 ~m~~~~~~Q~i~isGeSGaGKTe~~k~~~~yla~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~npileaFGnAkT~rN 241 (1184)
T 1i84_S 162 SMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQGPSFSYGELEKQLLQANPILEAFGNAKTVKN 241 (1184)
T ss_dssp HHHHHTCCEEEECCCSTTSSTTHHHHHHHHHHHHHSSCCSCC------CTTCCCCCSHHHHHHHHHHHHTTTTEEEETTE
T ss_pred HHHhcCCCcEEEEecCCCCCccHHHHHHHHHHHHHhcCCCcccccccccccccccchHHHHHHHHHHHHHHhcCCcCCCC
Confidence 999999999999999999999999999999999998753210 35899999999999999999999999
Q ss_pred CCCCcccceEEEEEcCCCCeeeeEEeeeeecccceeecCCCCCceeeeeeccc-CChhhHhhcCCCCCCCCccccCCCcc
Q 048174 154 NNSSRFGKFVEIQFDKRGRISGAAIRTYLLERSRVCKISDPERNYHCFYLLCA-APPDEIERYKLGNPTSFHYLNQSNCY 232 (1303)
Q Consensus 154 ~NSSRfGK~i~l~f~~~g~i~Ga~i~~yLLEksRvv~q~~~ERNfHIFYqll~-~~~~~~~~l~L~~~~~~~yl~~~~~~ 232 (1303)
||||||||||+|+||.+|.|+||+|.||||||||||+|++||||||||||||+ +++++++.|+|.+|.+|+||++|. .
T Consensus 242 ~NSSRfgk~~~i~f~~~g~i~ga~i~~ylLEksRv~~q~~~ErnfhiFYqll~g~~~~~~~~l~l~~~~~~~yl~~~~-~ 320 (1184)
T 1i84_S 242 DNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGH-V 320 (1184)
T ss_dssp EEEECSCEEEEEEECSSSCEEEEEEEECCCCCGGGSCCCTTCCCCTHHHHHHHHCCHHHHHHTTCCCTTSCSSCTTSS-C
T ss_pred ccccccceeEEEEECCCCCEeeeEEeEeecCCceeeeecCCCCchhhHHHHHcCCCHHHHHHcCCCChHhCCccCCCC-c
Confidence 99999999999999999999999999999999999999999999999999999 788999999999999999999875 5
Q ss_pred cccCCCCHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHhcCeeeeecCC-ccceecCcccHHHHHHHHHhcCCCHHHH
Q 048174 233 ELVGVNDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEE-DSSVVKDNESKFHLQMTAKLLMCDPGEL 311 (1303)
Q Consensus 233 ~~~~~dd~~~f~~~~~Al~~lG~~~~~~~~I~~ilaaILhLGni~F~~~~~-d~~~~~~~~~~~~l~~~a~LLgv~~~~L 311 (1303)
.++|+||+++|..|+.||++|||+.+++.+||+|||||||||||+|....+ +.+.+.+. ..++.||.||||++++|
T Consensus 321 ~~~~~~d~~~f~~~~~a~~~lg~~~~e~~~i~~ilaaiLhlGni~f~~~~~~~~~~~~~~---~~~~~~a~lLg~~~~~l 397 (1184)
T 1i84_S 321 PIPAQQDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDN---TAAQKVCHLMGINVTDF 397 (1184)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTTTCCCBCCTTTSCCBCCCS---HHHHHHHHHTTSCHHHH
T ss_pred CCCCCChHHHHHHHHHHHHhceeCHHHHHHHHHHHHHHHhhcCceeeccCCCcCcccCCh---HHHHHHHHHHCCCHHHH
Confidence 899999999999999999999999999999999999999999999987654 55555443 57999999999999999
Q ss_pred HHHHhhceeeeCCceeeccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcC-CCCceEEEeeeccccccCCCCCHH
Q 048174 312 EDALCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIGQD-PHSKCLIGVLDIYGFESFESNSFE 390 (1303)
Q Consensus 312 ~~~L~~~~~~~~~e~i~~~l~~~~A~~~Rdalak~LY~~LF~wiV~~iN~~l~~~-~~~~~~IgiLDI~GFE~f~~NsfE 390 (1303)
.++||++++.+++|.|+++++++||.++||||||+||++||+|||.+||.+|++. .....+||||||||||+|+.||||
T Consensus 398 ~~~l~~~~~~~~~e~~~~~~~~~~a~~~rdalak~lY~~lF~wlv~~iN~~l~~~~~~~~~~IgvLDi~GFE~f~~Nsfe 477 (1184)
T 1i84_S 398 TRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFE 477 (1184)
T ss_dssp HHHHHSCCCCCTTSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC------CEEEEEEECCCCCCCSSBCHH
T ss_pred HHHhcCcEEEeCCceEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCcceEEEeecCCcCCCCcchHH
Confidence 9999999999999999999999999999999999999999999999999999865 456789999999999999999999
Q ss_pred HHHHHhhhHHHHhHHhHhhHHhhHhhhhccCCCcccccc-cChHHHHHhhhcC--CCcccccchhhhcCCCCchHHHHHH
Q 048174 391 QFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDWSYVHF-VDNQDVLDLIEKK--PGGIIALLDEACMFPKSTHENFSQK 467 (1303)
Q Consensus 391 QlcINyaNEkLq~~f~~~vf~~eq~ey~~EgI~w~~i~~-~dn~~~ldlie~~--p~Gil~lLdee~~~p~~td~~f~~k 467 (1303)
|||||||||+|||+||+|||+.||++|.+|||+|.+|+| .||++|||||+++ |.|||+||||||++|++||.+|++|
T Consensus 478 QlciNy~nEkLq~~f~~~~f~~eq~ey~~Egi~~~~i~~~~dn~~~~~lie~~~~~~Gil~lLdee~~~p~~td~~~~~k 557 (1184)
T 1i84_S 478 QLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEK 557 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCSCCCCCCCCCCHHHHHTTSCCSSSCCHHHHHHHTTSCTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCccccccCCCcHHHHHHHhCCCCCCCchhhhhhhhCCCCCChHHHHHH
Confidence 999999999999999999999999999999999999999 5999999999973 3499999999999999999999999
Q ss_pred HHHHhcCCCCcccCCC--CCCCcEEEccCCCcchhhhhhhhhccchhHHHHHHHHhhchhhhhhccCCCCccc-------
Q 048174 468 LYQTFKDHKRFIKPKL--TRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLFPPISEE------- 538 (1303)
Q Consensus 468 l~~~~~~~~~f~~p~~--~~~~F~I~HyaG~V~Y~~~gflekN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~~------- 538 (1303)
|+..|++|++|.+|+. ....|+|+||||+|+|+++|||+||+|+|+++++.||+.|+|+||+.||+.....
T Consensus 558 l~~~~~~~~~~~~~~~~~~~~~F~i~Hyag~V~Y~~~gfl~kN~d~l~~~~~~ll~~s~~~~~~~lf~~~~~~~~~~~~~ 637 (1184)
T 1i84_S 558 LIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMA 637 (1184)
T ss_dssp HHHHTSSCTTEEECSSCTTTCEEEEECSSCEEEEECTTHHHHHHCCCCHHHHHHHHTCSCHHHHHHHSCCTTCCCC----
T ss_pred HHHHhCCCCCccCCCCCCCCCcEEEECCCceEEeccCCchhhccCcccHHHHHHHHhCchHHHHHHhccccccccccccc
Confidence 9999999999999986 4689999999999999999999999999999999999999999999999863210
Q ss_pred -----------ccCCCCccchhHhhHhhHHHHHHHHccCCCeeEEecCCCCCCCCCcCCccccccceecccHHHHHHHHh
Q 048174 539 -----------TTKSSKFSSIGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGVLEAIRVKC 607 (1303)
Q Consensus 539 -----------~~~~~~~~tv~~~fk~sL~~Lm~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gvle~iri~~ 607 (1303)
..+.++++||+++||.||+.||++|++|+||||||||||+.+.|+.||..+|++||||+||||+|||++
T Consensus 638 ~~~~~~~~~~~~~~~~~~~tv~~~f~~~l~~L~~~l~~t~phfvRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r 717 (1184)
T 1i84_S 638 KMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICR 717 (1184)
T ss_dssp -----------------CCCHHHHHHHHHHHHHHHHTTSEEEECCEECCCSSCCSSCCCHHHHHHHHHHTTHHHHHHHHH
T ss_pred cccccccCccccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceeeeCCCCcCCCCcccHHHHHHHHhhcCchHHHHhHh
Confidence 012235689999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCcccCHHHHHHhhcccccchhcc-ccchHHHHHHHHHhcCC--CCcccccccceeccchhhHHHHHHHhhhchhHHH
Q 048174 608 AGYPTRKTFSEFLDRFGILLPEIRKQ-NYDEKIACKWILEKMDL--KGYQIGKTKVFLKAGQMAELDAKRAKLLGHSAEV 684 (1303)
Q Consensus 608 ~Gyp~r~~~~eF~~Ry~~L~~~~~~~-~~~~~~~~~~il~~~~~--~~~~iGkTkVFlr~~~~~~LE~~R~~~l~~aA~~ 684 (1303)
+|||+|++|.+|+.||++|.|..++. ..|.+.+|+.||..+++ +.|+||+|||||+++++..||.+|...+..+++.
T Consensus 718 ~Gfp~R~~~~~F~~ry~~L~~~~~~~~~~d~k~~~~~lL~~l~l~~~~~~iG~TKVF~r~g~l~~LE~~r~~~l~~~~~~ 797 (1184)
T 1i84_S 718 QGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIA 797 (1184)
T ss_dssp HSCCEEEEHHHHHHHTTTTCTTTSCSSCCCHHHHHHHHHHTTTCCTTTCCBCSSEEEECTTHHHHHHHHHHHHTHHHHHH
T ss_pred hcCcccccHHHHHHHHHHhccccCCcCCCCHHHHHHHHHHHcCCCccceeEcCeEEEEechHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999876543 45789999999999877 4899999999999999999999999999999999
Q ss_pred HhhhhhhhhhhhhhhhhhhHHHHHHhhccccceeccccccchhhhHHHHHHHHHHHHHHHhhcchh
Q 048174 685 IQSQHRRRVTQKHYITLVQAAVCIQSSCRGILARRYCKVKKKEAAAVKIQKNSRTMMTRKAYSNVK 750 (1303)
Q Consensus 685 IQ~~~R~~~~Rk~y~~~r~aai~IQa~~Rg~laRk~~~~~r~~~AAi~IQ~~~Rg~~aRr~~~k~r 750 (1303)
||++||+|++|++|.+++. +..|+++||++||+|+++|.|.+++
T Consensus 798 iQ~~~Rg~l~R~~~~k~~~----------------------~~~a~~~iQ~~~r~~~~~k~~~~~r 841 (1184)
T 1i84_S 798 FQAQCRGYLARKAFAKRQQ----------------------QLESIFCIQYNVRSFMNVXHWPWMX 841 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 9999999999999876541 1245666777777777776665444
No 3
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=100.00 E-value=1.3e-197 Score=1855.10 Aligned_cols=717 Identities=38% Similarity=0.677 Sum_probs=655.9
Q ss_pred CCCCCccCCCCCChHHHHHHHHHHhhcCceeeeccCeeEeeCCCCCCCCCCcHHHHHHhcCCCCCCCCchHHHHHHHHHH
Q 048174 6 GGADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGVPFGKLSPHVFAIADAAYR 85 (1303)
Q Consensus 6 ~~~~Dl~~L~~l~E~~vL~~L~~Ry~~~~iYT~~G~iLiavNP~~~l~~ly~~~~~~~y~~~~~~~~~PHifavA~~Ay~ 85 (1303)
.++|||+.|++|||++||+||+.||..+.||||+|+||||||||+.+| +|+++++..|+++..+++||||||||+.||+
T Consensus 83 ~~~~Dl~~L~~l~E~svL~nL~~Ry~~~~IYTy~G~iLiavNPyk~l~-iY~~~~~~~Y~g~~~~~~pPHifaiA~~Ay~ 161 (837)
T 1kk8_A 83 EKLEDMANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTEIPPHLFSVADNAYQ 161 (837)
T ss_dssp TTCSBGGGSSCCSHHHHHHHHHHHHHTTCCEEEETTEEEEECCSSCCS-TTSHHHHHHHTTCCGGGSCCCHHHHHHHHHH
T ss_pred cchhhhhhhhcccHHHHHHHHHHHHhcCCceeeccceeEEeCCCcCCC-CCCHHHHHHhcCCCcCCCCCcHHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999998 9999999999999999999999999999999
Q ss_pred HHHHcCCCeEEEEeCCcCCCchhhHHHHHHHHHHHhCCCCcC--------CCcHHHHHHhhchHHHhhcccccccCCCCC
Q 048174 86 EMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAAE--------GRSVEQQVLESNPVLEAFGNAKTVKNNNSS 157 (1303)
Q Consensus 86 ~m~~~~~~QsIiisGESGaGKTe~~k~i~~yLa~~~~~~~~~--------~~~ie~~il~snpiLEAFGNAkT~rN~NSS 157 (1303)
+|+++++||||||||||||||||++|+||+|||.+++..... ..+|+++|+++||||||||||||+||||||
T Consensus 162 ~m~~~~~nQsIiiSGESGAGKTe~tK~i~~yla~~~~~~~~~~~~~~~~~~~~ie~~il~snpiLEAFGNAkT~rNdNSS 241 (837)
T 1kk8_A 162 NMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEAYGNAKTTRNNNSS 241 (837)
T ss_dssp HHHHHTSEEEEEEECSTTSSHHHHHHHHHHHHHHHSCCCCCC--------CCCHHHHHHHHHHHHHHHHEECCSSCTTEE
T ss_pred HHHhcCCCcEEEEeCCCCCCchhhHHHHHHHHHHhcccCCcccccccccccccHHHHHHHHHHHHHHhcCccCCCCCCCC
Confidence 999999999999999999999999999999999998654211 257999999999999999999999999999
Q ss_pred cccceEEEEEcCCCCeeeeEEeeeeecccceeecCCCCCceeeeeeccc-CChhhHhhcCC-CCCCCCccccCCCccccc
Q 048174 158 RFGKFVEIQFDKRGRISGAAIRTYLLERSRVCKISDPERNYHCFYLLCA-APPDEIERYKL-GNPTSFHYLNQSNCYELV 235 (1303)
Q Consensus 158 RfGK~i~l~f~~~g~i~Ga~i~~yLLEksRvv~q~~~ERNfHIFYqll~-~~~~~~~~l~L-~~~~~~~yl~~~~~~~~~ 235 (1303)
||||||+|+||.+|.|+||+|.+|||||||||.|++||||||||||||+ +++++++.|+| .+|.+|+||+++. ..++
T Consensus 242 RFGKfi~i~F~~~g~i~Ga~I~~YLLEKSRVv~q~~gERNfHIFYqLlaG~~~~~~~~l~L~~~~~~y~yL~~g~-~~~~ 320 (837)
T 1kk8_A 242 RFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQGC-LTVD 320 (837)
T ss_dssp SSEEEEEEEECTTSSEEEEEEEEECCCGGGGTCCCTTCCSBHHHHHHTSCSSGGGHHHHTCCSCGGGCTTTCSSC-SCBT
T ss_pred CceeEEEEEECCCCCEeeeEEEEEeccCceeeeecCCCCceeehHHHHcCCCHHHHHHhCCCCChhhcccccCCC-cccC
Confidence 9999999999999999999999999999999999999999999999999 78899999999 7899999999976 6789
Q ss_pred CCCCHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHhcCeeeeecCC-ccceecCcccHHHHHHHHHhcCCCHHHHHHH
Q 048174 236 GVNDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEE-DSSVVKDNESKFHLQMTAKLLMCDPGELEDA 314 (1303)
Q Consensus 236 ~~dd~~~f~~~~~Al~~lG~~~~~~~~I~~ilaaILhLGni~F~~~~~-d~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~ 314 (1303)
++||+++|..|+.||++|||+++++.+||+|||||||||||+|.+..+ +.+.+.+. +.++.||.||||++++|.++
T Consensus 321 ~~dD~~~f~~~~~Am~~lGfs~~e~~~i~~ilAaILhLGNi~F~~~~~~~~~~~~~~---~~l~~~a~LLgv~~~~L~~a 397 (837)
T 1kk8_A 321 NIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGT---AEAEKVAFLCGINAGDLLKA 397 (837)
T ss_dssp TBCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEC----CCCEESCS---HHHHHHHHHHTSCHHHHHHH
T ss_pred CcChHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHhhccceEEecCCCCccccCCH---HHHHHHHHHHCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999987654 55555543 57999999999999999999
Q ss_pred HhhceeeeCCceeeccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcCCCCceEEEeeeccccccCCCCCHHHHHH
Q 048174 315 LCKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIGQDPHSKCLIGVLDIYGFESFESNSFEQFCI 394 (1303)
Q Consensus 315 L~~~~~~~~~e~i~~~l~~~~A~~~Rdalak~LY~~LF~wiV~~iN~~l~~~~~~~~~IgiLDI~GFE~f~~NsfEQlcI 394 (1303)
||+|++.+++|.|+++++++||.++||||||+||++||+|||.+||.+|..+.....+||||||||||+|+.||||||||
T Consensus 398 L~~~~~~~~~e~v~~~~~~~qA~~~rdalaK~lY~rLF~wlV~~IN~~l~~~~~~~~~IGvLDI~GFE~f~~NsFEQlcI 477 (837)
T 1kk8_A 398 LLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCI 477 (837)
T ss_dssp HHSCEEC----CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCSSBCHHHHHH
T ss_pred hcCcEEEcCCceEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCcceEEEEecCCccccccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999766678899999999999999999999999
Q ss_pred HhhhHHHHhHHhHhhHHhhHhhhhccCCCcccccc-cChHHHHHhhhcCCCcccccchhhhcCCCCchHHHHHHHH-HHh
Q 048174 395 NFTNEKLQQHFNQNVFKMEQNDYRNEEIDWSYVHF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLY-QTF 472 (1303)
Q Consensus 395 NyaNEkLq~~f~~~vf~~eq~ey~~EgI~w~~i~~-~dn~~~ldlie~~p~Gil~lLdee~~~p~~td~~f~~kl~-~~~ 472 (1303)
|||||||||+||+|||+.||+||.+|||+|.+|+| .||++|||||++ |.|||+||||||++|++||++|++||+ +.+
T Consensus 478 NyaNEkLQq~Fn~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idLiek-p~GIlslLDEec~~p~~tD~tf~~kl~~~~~ 556 (837)
T 1kk8_A 478 NYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEK-PMGILSILEEECMFPKADDKSFQDKLYQNHM 556 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCCCCHHHHHHHHHHHS-TTSHHHHHHHHTTCTTCCHHHHHHHHHHHHT
T ss_pred HHhhHHHHHHHHHhhhHHHHHHhhhcCCceeecccccCHHHHHHHHhc-CCcHHHHHHHHhcCCCCChHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999 599999999997 789999999999999999999999975 556
Q ss_pred cCCCCcccCCCC------CCCcEEEccCCCcchhhhhhhhhccchhHHHHHHHHhhchhhhhhccCCCCccc-----ccC
Q 048174 473 KDHKRFIKPKLT------RSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLFPPISEE-----TTK 541 (1303)
Q Consensus 473 ~~~~~f~~p~~~------~~~F~I~HyaG~V~Y~~~gflekN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~~-----~~~ 541 (1303)
++|++|.+|+.. ...|+|+||||+|+|+++|||+||+|.|+++++.||++|+++||+.||+..... ..+
T Consensus 557 ~~~~~f~~p~~~~~k~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~~~~v~~Lf~~~~~~~g~~~~~k 636 (837)
T 1kk8_A 557 GKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEEPAGGGKKKK 636 (837)
T ss_dssp TTCSSEECCCSCSSTTCCCCSEEEEETTEEEEECCSSHHHHHSCCCCHHHHHHHHTCSSHHHHHHTCC------------
T ss_pred CCCcCccCCCccccccccCCceEEeeccCcccccHHHHHHhccccccHHHHHHHHhchHHHHHHHhcccccccCCCCCCC
Confidence 899999999864 679999999999999999999999999999999999999999999999864321 111
Q ss_pred C--CCccchhHhhHhhHHHHHHHHccCCCeeEEecCCCCCCCCCcCCccccccceecccHHHHHHHHhhCCCcccCHHHH
Q 048174 542 S--SKFSSIGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEF 619 (1303)
Q Consensus 542 ~--~~~~tv~~~fk~sL~~Lm~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gvle~iri~~~Gyp~r~~~~eF 619 (1303)
. ++++||+++||.||+.||++|++|+||||||||||+.+.|+.||..+|++||||+||||+|||+|+|||+|++|.+|
T Consensus 637 ~~~~~~~Tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~R~~f~eF 716 (837)
T 1kk8_A 637 GKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEF 716 (837)
T ss_dssp ------CCHHHHHHHHHHHHHHHHTTEEEEEEEEECCCSSCCTTCCCHHHHHHHHTTSSSCC-----CCCSCEEEEHHHH
T ss_pred CCCCCCCchHHHHHHHHHHHHHHHHccCCeeeeeeCCCccCCcccccchheeeeccccCccHHHHHHHHhccccccHHHH
Confidence 1 35689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccchhcc-ccchHHHHHHHHHhcCCC--CcccccccceeccchhhHHHHHHHhhhchhHHHHhhhhhhhhhhh
Q 048174 620 LDRFGILLPEIRKQ-NYDEKIACKWILEKMDLK--GYQIGKTKVFLKAGQMAELDAKRAKLLGHSAEVIQSQHRRRVTQK 696 (1303)
Q Consensus 620 ~~Ry~~L~~~~~~~-~~~~~~~~~~il~~~~~~--~~~iGkTkVFlr~~~~~~LE~~R~~~l~~aA~~IQ~~~R~~~~Rk 696 (1303)
+.||++|.|..++. ..|.+++|+.||..++++ .|++|+||||||++++..||.+|.+.+..+++.||++||||++|+
T Consensus 717 ~~RY~~L~~~~~~~~~~d~k~~~~~ll~~~~~~~~~~~~G~TKVF~r~~~~~~LE~~r~~~l~~~~~~iQa~~Rg~l~R~ 796 (837)
T 1kk8_A 717 KQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRK 796 (837)
T ss_dssp HHHHGGGSGGGCCC---CHHHHHHHHHHHHTCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccccccCCCCHHHHHHHHHHHcCCCccceeecCEEEEehhhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999999886543 468899999999998875 899999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHHhhccccceeccccccchhhhHHHHHHHHHHHHHHHhhcchh
Q 048174 697 HYITLVQAAVCIQSSCRGILARRYCKVKKKEAAAVKIQKNSRTMMTRKAYSNVK 750 (1303)
Q Consensus 697 ~y~~~r~aai~IQa~~Rg~laRk~~~~~r~~~AAi~IQ~~~Rg~~aRr~~~k~r 750 (1303)
+|.+++. +..||++||++||+|++||+|.+++
T Consensus 797 ~~~k~~~----------------------~r~a~~~IQ~~~R~~~~~r~~~w~~ 828 (837)
T 1kk8_A 797 AYKKLQD----------------------QRIGLSVIQRNIRKWLVLRNWQWWK 828 (837)
T ss_dssp HHHHHHH----------------------HHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHH----------------------HHHHHHHHHHHHHHHHHHcchHHHH
Confidence 9876542 1257889999999999999987544
No 4
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=100.00 E-value=6.3e-197 Score=1840.45 Aligned_cols=693 Identities=45% Similarity=0.778 Sum_probs=655.5
Q ss_pred CCCCCccCCCCCChHHHHHHHHHHh-hcCceeeeccCeeEeeCCCCCCCCCCcHHHHHHhcCCCCCCCCchHHHHHHHHH
Q 048174 6 GGADDMTKLSYLHEPGVLHNLATRY-EINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGVPFGKLSPHVFAIADAAY 84 (1303)
Q Consensus 6 ~~~~Dl~~L~~l~E~~vL~~L~~Ry-~~~~iYT~~G~iLiavNP~~~l~~ly~~~~~~~y~~~~~~~~~PHifavA~~Ay 84 (1303)
.++|||+.|++|||++||+||+.|| ..+.||||+|+||||||||+.+| +|+++++..|+++..+++||||||||+.||
T Consensus 69 ~~~~Dl~~L~~l~E~svL~nL~~Ry~~~~~IYTy~G~iLiavNPyk~l~-iY~~~~~~~Y~g~~~~~~pPHifaiA~~Ay 147 (795)
T 1w7j_A 69 VGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP-IYGEDIINAYSGQNMGDMDPHIFAVAEEAY 147 (795)
T ss_dssp TTCSSSTTCSCCSHHHHHHHHHHHHHHHCCCEEEETTEEEEECCSSCCS-CCSHHHHHHHTTCCGGGSCCCHHHHHHHHH
T ss_pred ccccchhhhhcccHHHHHHHHHHHHHhcccchhccCcceEEecCccccC-cCCHHHHHHHcCCCccCCCccHhHHHHHHH
Confidence 6899999999999999999999999 99999999999999999999998 999999999999999999999999999999
Q ss_pred HHHHHcCCCeEEEEeCCcCCCchhhHHHHHHHHHHHhCCCCcCCCcHHHHHHhhchHHHhhcccccccCCCCCcccceEE
Q 048174 85 REMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAAEGRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVE 164 (1303)
Q Consensus 85 ~~m~~~~~~QsIiisGESGaGKTe~~k~i~~yLa~~~~~~~~~~~~ie~~il~snpiLEAFGNAkT~rN~NSSRfGK~i~ 164 (1303)
++|+++++||||||||||||||||++|+||+|||.+++... ..+|+++|+++||||||||||||+||||||||||||+
T Consensus 148 ~~m~~~~~nQsIiisGESGAGKTe~tK~i~~yla~~~~~~~--~~~ie~~il~snpiLEAFGNAkT~rNdNSSRFGKfi~ 225 (795)
T 1w7j_A 148 KQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGSAS--EANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIE 225 (795)
T ss_dssp HHHHHHTCCEEEEEECSTTSSHHHHHHHHHHHHHHHTCCSS--SSCHHHHHHHHHHHHHHHHEECCSSCTTEECSEEEEE
T ss_pred HHhHhcCCCeEEEEeCCCCCCcchHHHHHHHHHHhhcCCCC--ccchHHHHHHHHHHHHHhcCccCCCCCCccccceEEE
Confidence 99999999999999999999999999999999999986532 3589999999999999999999999999999999999
Q ss_pred EEEcCCCCeeeeEEeeeeecccceeecCCCCCceeeeeeccc-CChhhHhhcCCCCCCCCccccCCCcccccCCCCHHHH
Q 048174 165 IQFDKRGRISGAAIRTYLLERSRVCKISDPERNYHCFYLLCA-APPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDY 243 (1303)
Q Consensus 165 l~f~~~g~i~Ga~i~~yLLEksRvv~q~~~ERNfHIFYqll~-~~~~~~~~l~L~~~~~~~yl~~~~~~~~~~~dd~~~f 243 (1303)
|+||.+|.|+||+|.+|||||||||.|++||||||||||||+ +++++++.|+|.++.+|+||++++|..++++||+++|
T Consensus 226 i~F~~~g~i~Ga~I~~YLLEKSRVv~q~~gERNfHIFYqLlag~~~~~~~~l~L~~~~~y~yl~~~~~~~~~~~dD~~~f 305 (795)
T 1w7j_A 226 IGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEM 305 (795)
T ss_dssp EEECTTSCEEEEEEEEECCCGGGGTCCCTTCCSBHHHHHHHHTTTSGGGGGGCCCCTTTSHHHHTTSCCCCTTCCHHHHH
T ss_pred EEECCCCCEeeeeceEEecccceEeccCCCCCchHhHHHHHcCCCHHHHHHccCCChHhCccccCCCCCcCCCccHHHHH
Confidence 999999999999999999999999999999999999999999 7788999999999999999999999999999999999
Q ss_pred HHHHhhhhhccCCHHHHHHHHHHHHHHHHhcCeeeeecCCccceecCcccHHHHHHHHHhcCCCHHHHHHHHhhceeeeC
Q 048174 244 LATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLLMCDPGELEDALCKRVMITP 323 (1303)
Q Consensus 244 ~~~~~Al~~lG~~~~~~~~I~~ilaaILhLGni~F~~~~~d~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~L~~~~~~~~ 323 (1303)
..|+.||++|||+++++.+||+|||||||||||+|...+++.+.+.+ +...++.||.||||++++|.++||+|++.++
T Consensus 306 ~~~~~Am~~lG~s~~e~~~i~~ilaaILhLGNi~F~~~~~~~~~v~~--~~~~l~~~a~LLgv~~~~L~~aL~~~~~~~~ 383 (795)
T 1w7j_A 306 VNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPP--KHDPLTIFCDLMGVDYEEMAHWLCHRKLATA 383 (795)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTCCCEEEETTEEECCT--TCHHHHHHHHHHTCCHHHHHHHHSEEEEECS
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCceEeecCCcceeecC--ChHHHHHHHHHhCCCHHHHHHHhcccEEEeC
Confidence 99999999999999999999999999999999999887666555532 2257999999999999999999999999999
Q ss_pred CceeeccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcCCCCceEEEeeeccccccCCCCCHHHHHHHhhhHHHHh
Q 048174 324 EEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIGQDPHSKCLIGVLDIYGFESFESNSFEQFCINFTNEKLQQ 403 (1303)
Q Consensus 324 ~e~i~~~l~~~~A~~~Rdalak~LY~~LF~wiV~~iN~~l~~~~~~~~~IgiLDI~GFE~f~~NsfEQlcINyaNEkLq~ 403 (1303)
+|.++++++++||.++||||||+||++||+|||.+||.+|........+||||||||||+|+.|||||||||||||||||
T Consensus 384 ~e~v~~~~~~~qA~~~rdalaK~lY~rLF~wlV~~IN~~l~~~~~~~~~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq 463 (795)
T 1w7j_A 384 TETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQ 463 (795)
T ss_dssp SCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHH
T ss_pred CceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccceEEeeccCcccccCcCCHHHHHHHhhhHHHHH
Confidence 99999999999999999999999999999999999999999776678999999999999999999999999999999999
Q ss_pred HHhHhhHHhhHhhhhccCCCcccccccChHHHHHhhhcCCCcccccchhhhcCCCCchHHHHHHHHHHh-cCCCCcccCC
Q 048174 404 HFNQNVFKMEQNDYRNEEIDWSYVHFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLYQTF-KDHKRFIKPK 482 (1303)
Q Consensus 404 ~f~~~vf~~eq~ey~~EgI~w~~i~~~dn~~~ldlie~~p~Gil~lLdee~~~p~~td~~f~~kl~~~~-~~~~~f~~p~ 482 (1303)
+||+|||+.||+||.+|||+|.+|+|.||++|||||+++ .|||+||||||++|++||++|++||+..| ++|++|.+|+
T Consensus 464 ~Fn~~~F~~EqeeY~~EgI~w~~i~f~DN~~~idLie~~-~GIlslLDEec~~p~~tD~~f~~kl~~~~~~~~~~f~~p~ 542 (795)
T 1w7j_A 464 QFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPR 542 (795)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCCCCCCHHHHHHHHST-TSHHHHHHHHHTSTTCCHHHHHHHHHHHHTTTCTTEECCT
T ss_pred HHHHHHHHHHHHHHHhcCCcccccCccccHHHHHHHHhc-CCHHHhhhhhccCCCCChHHHHHHHHHHhhccCCccccCC
Confidence 999999999999999999999999999999999999988 79999999999999999999999999998 9999999999
Q ss_pred CCCCCcEEEccCCCcchhhhhhhhhccchhHHHHHHHHhhch-hhhhhccCCCCccc-----------------------
Q 048174 483 LTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASE-CSFVSGLFPPISEE----------------------- 538 (1303)
Q Consensus 483 ~~~~~F~I~HyaG~V~Y~~~gflekN~D~l~~~~~~ll~~S~-~~~i~~lf~~~~~~----------------------- 538 (1303)
.....|+|+||||+|+|+++|||+||+|.++++++.||+.|+ ++||+.||+.....
T Consensus 543 ~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~~~~~v~~lf~~~~~~~~~~~~~~s~~~~~s~~~~~~~~ 622 (795)
T 1w7j_A 543 LSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAK 622 (795)
T ss_dssp TCSSEEEEECSSCEEEEECTTHHHHHHCCCCHHHHHHHHTCSSCSHHHHTTC----------------------------
T ss_pred CCCCceEEEecceEEEEechhHHhhccccccHHHHHHHHhccccHHHHHHhccccccccccccccccccccccccccccc
Confidence 888999999999999999999999999999999999999999 99999999753210
Q ss_pred ----ccCCCCccchhHhhHhhHHHHHHHHccCCCeeEEecCCCCCCCCCcCCccccccceecccHHHHHHHHhhCCCccc
Q 048174 539 ----TTKSSKFSSIGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRK 614 (1303)
Q Consensus 539 ----~~~~~~~~tv~~~fk~sL~~Lm~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gvle~iri~~~Gyp~r~ 614 (1303)
..+..+++||+++||.||+.||++|++|+||||||||||+.+.|+.||..+|++||||+||||+|||+|+|||+|+
T Consensus 623 ~~~~~~~~~~~~Tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~ 702 (795)
T 1w7j_A 623 ARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRW 702 (795)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHHTSEEEEEEEECCCTTCCTTCCCHHHHHHHHHHTTHHHHHHHHHHSCCEEE
T ss_pred cccccccCCCCCcHHHHHHHHHHHHHHHHhcCCCeEEEEeCCCCcCChhhcCcccccchhhhCChHHHHHHHHcCCCccc
Confidence 0122356899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHhhcccccchhccccchHHHHHHHHHhcCC--CCcccccccceeccchhhHHHHHHHhhhchhHHHHhhhhhhh
Q 048174 615 TFSEFLDRFGILLPEIRKQNYDEKIACKWILEKMDL--KGYQIGKTKVFLKAGQMAELDAKRAKLLGHSAEVIQSQHRRR 692 (1303)
Q Consensus 615 ~~~eF~~Ry~~L~~~~~~~~~~~~~~~~~il~~~~~--~~~~iGkTkVFlr~~~~~~LE~~R~~~l~~aA~~IQ~~~R~~ 692 (1303)
+|.+|+.||++|+|...... |++++|+.||..+++ ++|+||+||||||++++..||.+|.+.+..+++.||++||+|
T Consensus 703 ~f~eF~~RY~~L~~~~~~~~-d~k~~~~~il~~~~~~~~~~~~G~TKVF~r~~~~~~LE~~r~~~l~~~~~~iQ~~~Rg~ 781 (795)
T 1w7j_A 703 TYQEFFSRYRVLMKQKDVLS-DRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGW 781 (795)
T ss_dssp EHHHHHHHHGGGSCGGGCCS-CHHHHHHHHHHHHCCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCcccCCC-CHHHHHHHHHHHhCCCccceEEcCceEEEchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999865544 899999999999866 489999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhHH
Q 048174 693 VTQKHYITLVQAA 705 (1303)
Q Consensus 693 ~~Rk~y~~~r~aa 705 (1303)
++|++|+++|+|+
T Consensus 782 l~R~~~~~~r~a~ 794 (795)
T 1w7j_A 782 LMRKKYMRMRRGD 794 (795)
T ss_dssp HHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999875
No 5
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=100.00 E-value=7.3e-197 Score=1876.55 Aligned_cols=708 Identities=40% Similarity=0.678 Sum_probs=651.5
Q ss_pred CCCCCCCccCCCCCChHHHHHHHHHHhhcCceeeeccCeeEeeCCCCCCCCCCcHHHHHHhcCCCCCCCCchHHHHHHHH
Q 048174 4 PAGGADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGVPFGKLSPHVFAIADAA 83 (1303)
Q Consensus 4 ~~~~~~Dl~~L~~l~E~~vL~~L~~Ry~~~~iYT~~G~iLiavNP~~~l~~ly~~~~~~~y~~~~~~~~~PHifavA~~A 83 (1303)
...++|||+.|++|||++|||||+.||..+.||||+|+||||||||+.+|+||+++++++|+++..+++||||||||+.|
T Consensus 55 ~~~~veDl~~L~~LnE~svL~nL~~Ry~~~~IYTy~G~iLIaVNPyk~lp~iY~~~~~~~Y~g~~~~~lpPHIfaiA~~A 134 (1052)
T 4anj_A 55 SKKDVEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPHVFAIADKA 134 (1052)
T ss_dssp SSCCCSBGGGSSSCSHHHHHHHHHHHHHTTCCEEEETTEEEEECCSSCCTTTTSHHHHHHHTTCCBTTBCSCHHHHHHHH
T ss_pred ccCCCcccccCCCCCHHHHHHHHHHHHcCCCcEEeECCEEEEECCCCCccccCCHHHHHHhcCCCCCCCCCcHHHHHHHH
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCeEEEEeCCcCCCchhhHHHHHHHHHHHhCCCCcCCCcHHHHHHhhchHHHhhcccccccCCCCCcccceE
Q 048174 84 YREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAAEGRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFV 163 (1303)
Q Consensus 84 y~~m~~~~~~QsIiisGESGaGKTe~~k~i~~yLa~~~~~~~~~~~~ie~~il~snpiLEAFGNAkT~rN~NSSRfGK~i 163 (1303)
|+.|+++++||||||||||||||||++|+||+|||.+++.. ..++++|+++||||||||||||++|||||||||||
T Consensus 135 Y~~M~~~~~nQsIiiSGESGAGKTestK~im~yLa~~~~~~----~~ie~~Il~snpiLEAFGNAKT~rNdNSSRFGK~i 210 (1052)
T 4anj_A 135 FRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTG----QDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFV 210 (1052)
T ss_dssp HHHHHHHTCCEEEEEECSTTSSHHHHHHHHHHHHHHHHCC-------CTTHHHHTHHHHHHHHEECCSSCTTEESSEEEE
T ss_pred HHHHHHhCCCceEEEecCCCCCHHHHHHHHHHHHHHhcCCC----ccHHHHHHHHHHHHHhccCCCCCCCCCcCCceeEE
Confidence 99999999999999999999999999999999999998643 46899999999999999999999999999999999
Q ss_pred EEEEcCCCCeeeeEEeeeeecccceeecCCCCCceeeeeeccc-CChhhHhhcCCCCCCCCccccCC-------------
Q 048174 164 EIQFDKRGRISGAAIRTYLLERSRVCKISDPERNYHCFYLLCA-APPDEIERYKLGNPTSFHYLNQS------------- 229 (1303)
Q Consensus 164 ~l~f~~~g~i~Ga~i~~yLLEksRvv~q~~~ERNfHIFYqll~-~~~~~~~~l~L~~~~~~~yl~~~------------- 229 (1303)
+|+||.+|.|+||+|.+|||||||||.|++||||||||||||+ +++++++.|+|.+|++|+|||++
T Consensus 211 el~F~~~G~i~Ga~I~~YLLEKSRVv~q~~gERNfHIFYqLlaGa~~~~r~~l~L~~~~~y~yL~qg~~~~~~~~~~~~~ 290 (1052)
T 4anj_A 211 EIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQ 290 (1052)
T ss_dssp EEEECTTSCEEEEEEEEECCCSGGGTCCCTTCCSBHHHHHHHHHCCHHHHHHHTCCCGGGCHHHHTSCCCCBCCHHHHTT
T ss_pred EEEECCCCCEEEEEEeccccccCceeecCCCCCCcccHHHHhcCCCHHHHHHcCCCChHhCchhcCCCccccccccchhh
Confidence 9999999999999999999999999999999999999999999 88999999999999999999986
Q ss_pred -------------CcccccCCCCHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHhcCeeeeecCC--ccceecCcccH
Q 048174 230 -------------NCYELVGVNDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEE--DSSVVKDNESK 294 (1303)
Q Consensus 230 -------------~~~~~~~~dd~~~f~~~~~Al~~lG~~~~~~~~I~~ilaaILhLGni~F~~~~~--d~~~~~~~~~~ 294 (1303)
+|..++++||+++|.+|+.||++|||+++++.+||+|||||||||||+|.+..+ +++.+. ..+.
T Consensus 291 ~~~~~~~~~~~~~g~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~I~~iLAaILhLGNi~F~~~~~~~~~~~~~-~~~~ 369 (1052)
T 4anj_A 291 ILQNRKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLK-NKST 369 (1052)
T ss_dssp SCGGGCCHHHHHHCCBCCSSCCHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCEEC-------CEEC-GGGH
T ss_pred hcccccchhhccCCCccCCCcchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceeEEecCCCCCCcccc-cCCh
Confidence 466789999999999999999999999999999999999999999999987654 233333 3356
Q ss_pred HHHHHHHHhcCCCHHHHHHHHhhceee-----eCCceeeccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcCCCC
Q 048174 295 FHLQMTAKLLMCDPGELEDALCKRVMI-----TPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIGQDPHS 369 (1303)
Q Consensus 295 ~~l~~~a~LLgv~~~~L~~~L~~~~~~-----~~~e~i~~~l~~~~A~~~Rdalak~LY~~LF~wiV~~iN~~l~~~~~~ 369 (1303)
..++.||.||||++++|.++||++++. ++||.++++++++||.++||||||+||++||+|||++||.+|..+. .
T Consensus 370 ~~l~~~a~LLgv~~~~L~~aLt~r~~~~~~~~~~~e~i~~~l~~~qA~~~rDaLAK~LY~rLF~wiV~~IN~~l~~~~-~ 448 (1052)
T 4anj_A 370 QALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFET-S 448 (1052)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHEEC-------------CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSC-C
T ss_pred HHHHHHHHHhCCCHHHHHHHHhhceeeecccccCceEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc-c
Confidence 789999999999999999999998874 5789999999999999999999999999999999999999998653 5
Q ss_pred ceEEEeeeccccccCCCCCHHHHHHHhhhHHHHhHHhHhhHHhhHhhhhccCCCcccccccChHHHHHhhhcCCCccccc
Q 048174 370 KCLIGVLDIYGFESFESNSFEQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDWSYVHFVDNQDVLDLIEKKPGGIIAL 449 (1303)
Q Consensus 370 ~~~IgiLDI~GFE~f~~NsfEQlcINyaNEkLq~~f~~~vf~~eq~ey~~EgI~w~~i~~~dn~~~ldlie~~p~Gil~l 449 (1303)
..+||||||||||+|+.|||||||||||||||||+||+|||+.||+||.+|||+|.+|+|.||++|||||+++|.|||+|
T Consensus 449 ~~~IGILDI~GFE~f~~NsFEQLCINyaNEkLQq~Fn~~vF~~EqeeY~~EgI~w~~I~f~DN~~~idLie~kp~GIl~l 528 (1052)
T 4anj_A 449 SYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDI 528 (1052)
T ss_dssp SEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHHHHHHCTTTSHHHH
T ss_pred cceEEEEecCCCcccccCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCcccCCcCCcHHHHHHHHcCcccHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhcCCCCchHHHHHHHHHHhcCCCCcccCCCC----------CCCcEEEccCCCcchhhhhhhhhccchhHHHHHHH
Q 048174 450 LDEACMFPKSTHENFSQKLYQTFKDHKRFIKPKLT----------RSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDL 519 (1303)
Q Consensus 450 Ldee~~~p~~td~~f~~kl~~~~~~~~~f~~p~~~----------~~~F~I~HyaG~V~Y~~~gflekN~D~l~~~~~~l 519 (1303)
|||||++|++||++|++||++.|++|++|.+|+.+ ...|+|+||||+|+|+++|||+||+|.|++++++|
T Consensus 529 LDEe~~~p~~tD~~f~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKNrD~l~~~~~~l 608 (1052)
T 4anj_A 529 LDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESL 608 (1052)
T ss_dssp HHHHHHSSSCCHHHHHHHHHHTTTTCTTEECGGGCSCSTTTTCCTTSEEEEEETTEEEEEECTTHHHHHBCCCCHHHHHH
T ss_pred HHHHhcCCCCcHHHHHHHHHHHhccCccccCCcccccccccccCCCCCeEEEcCCccEEEecCChhhhccccccHHHHHH
Confidence 99999999999999999999999999999887643 34699999999999999999999999999999999
Q ss_pred HhhchhhhhhccCCCCccccc------CCCCccchhHhhHhhHHHHHHHHccCCCeeEEecCCCCCCCCCcCCccccccc
Q 048174 520 LSASECSFVSGLFPPISEETT------KSSKFSSIGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQ 593 (1303)
Q Consensus 520 l~~S~~~~i~~lf~~~~~~~~------~~~~~~tv~~~fk~sL~~Lm~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~Q 593 (1303)
|++|+|+||+.||+....... ++.++.||+++||.||+.||++|++|+||||||||||+.+.|+.||..+|++|
T Consensus 609 l~~S~~~~i~~Lf~~~~~~~~~~~~~~~~~~~~Tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~Q 688 (1052)
T 4anj_A 609 ICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQ 688 (1052)
T ss_dssp HHTCSCHHHHHTTCC----------------CCBHHHHHHHHHHHHHHHHHTSEEEEEEEECCCSSCCSSCCCHHHHHHH
T ss_pred HHhCCcHHHHHhhhccccccccccCCCCCCCCccHHHHHHHHHHHHHHHHcCcCCEEEEEECCCccCCCCcCCHHHHHHH
Confidence 999999999999986432211 12356899999999999999999999999999999999999999999999999
Q ss_pred eecccHHHHHHHHhhCCCcccCHHHHHHhhcccccchhccccchHHHHHHHHHhcCCC--CcccccccceeccchhhHHH
Q 048174 594 LRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWILEKMDLK--GYQIGKTKVFLKAGQMAELD 671 (1303)
Q Consensus 594 Lr~~gvle~iri~~~Gyp~r~~~~eF~~Ry~~L~~~~~~~~~~~~~~~~~il~~~~~~--~~~iGkTkVFlr~~~~~~LE 671 (1303)
|||+||||+|||+|+|||+|++|.+|++||++|+|..+. ..|++++|+.||+.++++ +|+||+||||||+++++.||
T Consensus 689 Lr~~GvLE~irI~r~Gyp~R~~f~eF~~RY~~L~~~~~~-~~d~k~~~~~iL~~l~l~~~~y~iG~TKVFlr~~~~~~LE 767 (1052)
T 4anj_A 689 LQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKLA-RLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 767 (1052)
T ss_dssp HHHHTHHHHHHHTTTCCCEEEEHHHHHHHHHTTSCSSGG-GSCHHHHHHHHHHHTSCCGGGEEECSSEEEECTTCHHHHH
T ss_pred HHHhhHHHHHHHHhcCCCCcCcHHHHHHHHHHhCccccc-CCCHHHHHHHHHHHcCcCcccEEecCCEEeeCcCHHHHHH
Confidence 999999999999999999999999999999999998654 468899999999999885 89999999999999999999
Q ss_pred HHHHhhhchhHHHHhhhhhhhhhhhhhhhhhhHHHHHHhhccccceec
Q 048174 672 AKRAKLLGHSAEVIQSQHRRRVTQKHYITLVQAAVCIQSSCRGILARR 719 (1303)
Q Consensus 672 ~~R~~~l~~aA~~IQ~~~R~~~~Rk~y~~~r~aai~IQa~~Rg~laRk 719 (1303)
.+|...+..+|++||+ +|+|++|++|++++.+++.||..+|++..|+
T Consensus 768 ~~r~~~~~~~~~~iq~-~r~~l~r~~~~k~~~~a~~i~~~~r~~~~r~ 814 (1052)
T 4anj_A 768 QIMKSDPDHLAELVKR-VNHWLICSRWKKVQWCSLSVIKLKNKIKYRA 814 (1052)
T ss_dssp HHHCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998886 6999999999999999999999888765443
No 6
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=100.00 E-value=5.9e-191 Score=1832.17 Aligned_cols=677 Identities=43% Similarity=0.794 Sum_probs=643.0
Q ss_pred CCCCCccCCCCCChHHHHHHHHHHhhcCceeeeccCeeEeeCCCCCCCCCCcHHHHHHhcCCCCCCCCchHHHHHHHHHH
Q 048174 6 GGADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGVPFGKLSPHVFAIADAAYR 85 (1303)
Q Consensus 6 ~~~~Dl~~L~~l~E~~vL~~L~~Ry~~~~iYT~~G~iLiavNP~~~l~~ly~~~~~~~y~~~~~~~~~PHifavA~~Ay~ 85 (1303)
.++|||+.|++|||++||+||+.||..+.||||+|+||||||||+.+| +|+++++..|+++..+++||||||||+.||+
T Consensus 86 ~~~~Dl~~L~~l~e~~vl~nL~~Ry~~~~iYTy~G~ilvavNPyk~l~-iy~~~~~~~Y~~~~~~~~pPHifaiA~~Ay~ 164 (1010)
T 1g8x_A 86 DGVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRNEVAPHIFAISDVAYR 164 (1010)
T ss_dssp TTCSBGGGCSSCCHHHHHHHHHHHHTTTCCEEEETTEEEEECCSSCCS-CCSHHHHHHHTTCCTTTSCCCHHHHHHHHHH
T ss_pred cchhhhhhhhcccHHHHHHHHHHHHhhCCceeccCceeEEecCCcccc-CCCHHHHHHhcCCCccCCCccHHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999998 9999999999999999999999999999999
Q ss_pred HHHHcCCCeEEEEeCCcCCCchhhHHHHHHHHHHHhCCCCc-CCCcHHHHHHhhchHHHhhcccccccCCCCCcccceEE
Q 048174 86 EMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA-EGRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVE 164 (1303)
Q Consensus 86 ~m~~~~~~QsIiisGESGaGKTe~~k~i~~yLa~~~~~~~~-~~~~ie~~il~snpiLEAFGNAkT~rN~NSSRfGK~i~ 164 (1303)
+|+.+++||||||||||||||||++|+||+|||.+++.... ...+|+++|+++||||||||||||+||||||||||||+
T Consensus 165 ~m~~~~~~QsIiisGESGAGKTe~~K~i~~yla~~~~~~~~~~~~~ie~~il~snpiLEAFGNAkT~rN~NSSRFGK~i~ 244 (1010)
T 1g8x_A 165 SMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNSSEFGKFIE 244 (1010)
T ss_dssp HHHHHTCCEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCCTTTSSHHHHHHHHHHHHHHHHHEECCSSCTTEECSEEEEE
T ss_pred HHHhcCCCeEEEEeCCCCCCcchHHHHHHHHHHHhcccCCCcccchHHHHHHHHHHHHHHhCCCcCCCCCCccccceEEE
Confidence 99999999999999999999999999999999999875432 24689999999999999999999999999999999999
Q ss_pred EEEcCCCCeeeeEEeeeeecccceeecCCCCCceeeeeeccc-CChhhHhhcCCCCCCCCccccCCCcccccCCCCHHHH
Q 048174 165 IQFDKRGRISGAAIRTYLLERSRVCKISDPERNYHCFYLLCA-APPDEIERYKLGNPTSFHYLNQSNCYELVGVNDANDY 243 (1303)
Q Consensus 165 l~f~~~g~i~Ga~i~~yLLEksRvv~q~~~ERNfHIFYqll~-~~~~~~~~l~L~~~~~~~yl~~~~~~~~~~~dd~~~f 243 (1303)
|+||.+|.|+||+|.+|||||||||.|++||||||||||||+ +++++++.|+|.++.+|+||++|+|..++++||+++|
T Consensus 245 i~F~~~g~i~Ga~i~~yLLEksRvv~q~~~ERnfHIFYqll~g~~~~~~~~l~L~~~~~y~yl~~~~~~~~~~~dD~~~f 324 (1010)
T 1g8x_A 245 IQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEF 324 (1010)
T ss_dssp EEECTTSCEEEEEEEEECCCGGGGTCCCTTCCCBHHHHHHHHHCCHHHHHHHTCCCGGGCGGGSSSSCCCCBTCCHHHHH
T ss_pred EEECCCCCCcceEEEEEEcCCceeeeecCCCCcchhHHHHHcCCCHHHHHHhCCCChHhcchhcCCCccccCCCChHHHH
Confidence 999999999999999999999999999999999999999999 8889999999999999999999999999999999999
Q ss_pred HHHHhhhhhccCCHHHHHHHHHHHHHHHHhcCeeeeecCCccceecCcccHHHHHHHHHhcCCCHHHHHHHHhhceeeeC
Q 048174 244 LATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLLMCDPGELEDALCKRVMITP 323 (1303)
Q Consensus 244 ~~~~~Al~~lG~~~~~~~~I~~ilaaILhLGni~F~~~~~d~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~L~~~~~~~~ 323 (1303)
..|+.||++|||+++++.+||+|||||||||||+|....++.+.+.+. ..++.||.||||++++|.++||++++.++
T Consensus 325 ~~~~~A~~~lg~~~~e~~~i~~ilaaILhLGni~F~~~~~~~~~~~~~---~~l~~~a~LLgv~~~~L~~~l~~~~~~~~ 401 (1010)
T 1g8x_A 325 KITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDK---TALNAASTVFGVNPSVLEKALMEPRILAG 401 (1010)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTTCCCBCCTTSSCBCSCC---HHHHHHHHHHTSCHHHHHHHHHSCEEESS
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHhccceEEecCCCccccCCh---HHHHHHHHHHCCCHHHHHHHHhCcEEEeC
Confidence 999999999999999999999999999999999998776556655543 57999999999999999999999999999
Q ss_pred CceeeccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcCCCCceEEEeeeccccccCCCCCHHHHHHHhhhHHHHh
Q 048174 324 EEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIGQDPHSKCLIGVLDIYGFESFESNSFEQFCINFTNEKLQQ 403 (1303)
Q Consensus 324 ~e~i~~~l~~~~A~~~Rdalak~LY~~LF~wiV~~iN~~l~~~~~~~~~IgiLDI~GFE~f~~NsfEQlcINyaNEkLq~ 403 (1303)
+|.|+++++++||.++||||||+||++||+|||.+||.+|+... ...+||||||||||+|+.|||||||||||||||||
T Consensus 402 ~e~v~~~~~~~qa~~~rdalak~lY~~LF~wlV~~IN~~l~~~~-~~~~IgvLDI~GFE~f~~NsfEQlcINy~NEkLQq 480 (1010)
T 1g8x_A 402 RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSER-KAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQ 480 (1010)
T ss_dssp SSEEECCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSS-CSEEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHH
T ss_pred CeeEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cCceeeeccCcccccCCcCcHHHHHHHhhhHHHHH
Confidence 99999999999999999999999999999999999999998655 67899999999999999999999999999999999
Q ss_pred HHhHhhHHhhHhhhhccCCCcccccc-cChHHHHHhhhc-CCCcccccchhhhcCCCCchHHHHHHHHHHhc-CCCCccc
Q 048174 404 HFNQNVFKMEQNDYRNEEIDWSYVHF-VDNQDVLDLIEK-KPGGIIALLDEACMFPKSTHENFSQKLYQTFK-DHKRFIK 480 (1303)
Q Consensus 404 ~f~~~vf~~eq~ey~~EgI~w~~i~~-~dn~~~ldlie~-~p~Gil~lLdee~~~p~~td~~f~~kl~~~~~-~~~~f~~ 480 (1303)
+||+|||+.||+||.+|||+|.+|+| .||++|||||++ +|.|||+||||||++|++||++|++||++.++ +|++|.+
T Consensus 481 ~F~~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idlie~~~~~Gil~lLdee~~~p~~td~~f~~kl~~~~~~~~~~f~~ 560 (1010)
T 1g8x_A 481 FFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560 (1010)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCCCCCCCSHHHHHHHHCTTTTCHHHHHHHHTTSSSCCHHHHHHHHHHHHTTTCTTEEC
T ss_pred HHHHHhhHHHHHHhhccCCCccccccccChHHHHHHHhcCCCCeeehhhhHHhCCCCCChHHHHHHHHHHhcCCCCCccc
Confidence 99999999999999999999999999 599999999998 48999999999999999999999999999999 9999999
Q ss_pred CCCCCCCcEEEccCCCcchhhhhhhhhccchhHHHHHHHHhhchhhhhhccCCCCc--ccccCCCCccchhHhhHhhHHH
Q 048174 481 PKLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLFPPIS--EETTKSSKFSSIGSRFKLQLQQ 558 (1303)
Q Consensus 481 p~~~~~~F~I~HyaG~V~Y~~~gflekN~D~l~~~~~~ll~~S~~~~i~~lf~~~~--~~~~~~~~~~tv~~~fk~sL~~ 558 (1303)
|+.....|+|+||||+|+|+++|||+||+|.|+++++.||++|+++||+.||+... ....+.++++||+++||.||+.
T Consensus 561 ~~~~~~~F~i~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~~~~lf~~~~~~~~~~k~~~~~tv~~~fk~sL~~ 640 (1010)
T 1g8x_A 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAAQYKEQLAS 640 (1010)
T ss_dssp CTTCSSEEEEEETTEEEEEECTTHHHHHHCCCCHHHHHHHTTCSCHHHHHHHHCHHHHSCCCCSSSCCCHHHHHHHHHHH
T ss_pred CCCCCCCEEEeeeceEEEEeecCccccccccccHHHHHHHHhCcHHHHHHHhcccccccCCCCCCCCCchHHHHHHHHHH
Confidence 99877899999999999999999999999999999999999999999999998642 1123344679999999999999
Q ss_pred HHHHHccCCCeeEEecCCCCCCCCCcCCccccccceecccHHHHHHHHhhCCCcccCHHHHHHhhcccccchhccccchH
Q 048174 559 LMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEK 638 (1303)
Q Consensus 559 Lm~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gvle~iri~~~Gyp~r~~~~eF~~Ry~~L~~~~~~~~~~~~ 638 (1303)
||++|++|+||||||||||+.+.|+.||..+|++||||+||||+|||+++|||+|++|.+|+.||++|+|....+..|.+
T Consensus 641 Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~r~~~~~F~~RY~~L~~~~~~~~~d~~ 720 (1010)
T 1g8x_A 641 LMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQ 720 (1010)
T ss_dssp HHHHHTTSEEEEEEEECSCSSCCTTCCCHHHHHHHHHHSSHHHHHHHHTTSCCEEEEHHHHHHHHGGGSTTCCTTCSCHH
T ss_pred HHHHHHhcCCeeeeeecCCcccccCCcChhhcchhcccCccHHHHHHHHhCCcccccHHHHHHHHHHhCCCCCcCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987222346889
Q ss_pred HHHHHHHHhcCCC--CcccccccceeccchhhHHHHHHHhhhchhHHHHhh
Q 048174 639 IACKWILEKMDLK--GYQIGKTKVFLKAGQMAELDAKRAKLLGHSAEVIQS 687 (1303)
Q Consensus 639 ~~~~~il~~~~~~--~~~iGkTkVFlr~~~~~~LE~~R~~~l~~aA~~IQ~ 687 (1303)
++|+.||..++++ .|+||+||||||++++..||.+|.+.+..+++.||-
T Consensus 721 ~~~~~ll~~~~~~~~~~~~G~tkVF~r~~~l~~LE~~R~~~l~~~~~~iQY 771 (1010)
T 1g8x_A 721 KATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQRLGSEQTKSDY 771 (1010)
T ss_dssp HHHHHHHHHTTCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCccceeehhhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999875 899999999999999999999999999999888873
No 7
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=100.00 E-value=1.9e-192 Score=1778.21 Aligned_cols=671 Identities=37% Similarity=0.671 Sum_probs=613.0
Q ss_pred CCCCCCCCccCCCCCChHHHHHHHHHHhhcCceeeeccCeeEeeCCCCCCCCCCcHHHHHHhcCCCCCCCCchHHHHHHH
Q 048174 3 SPAGGADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGVPFGKLSPHVFAIADA 82 (1303)
Q Consensus 3 ~~~~~~~Dl~~L~~l~E~~vL~~L~~Ry~~~~iYT~~G~iLiavNP~~~l~~ly~~~~~~~y~~~~~~~~~PHifavA~~ 82 (1303)
+..+++|||+.|++|||++||+||+.||..+.||||+|+||||||||+.+| +|+++++..|+++..+++||||||||+.
T Consensus 5 ~~~~~~~Dl~~L~~l~E~~vl~nL~~Ry~~~~IYTy~G~iLiavNPyk~l~-iY~~~~~~~Y~g~~~~~~pPHifaiA~~ 83 (697)
T 1lkx_A 5 TKAEGVPDFVLLNQITENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNLN-IYKESDIKAYNGRYKYEMPPHMYALAND 83 (697)
T ss_dssp ----CCSSGGGCSSCSHHHHHHHHHHHHHTTCCEEESSSCEEEECCSSCCS-CCSHHHHHHHSSCCGGGSCCCHHHHHHH
T ss_pred ccccCCcccccCCCCCHHHHHHHHHHHHhcCCcEEeeCCeEEEEcCCcCCC-CCCHHHHHHHhCCCCCCCCchHHHHHHH
Confidence 456799999999999999999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHHHHHHcCCCeEEEEeCCcCCCchhhHHHHHHHHHHHhCCCCcCCCcHHHHHHhhchHHHhhcccccccCCCCCcccce
Q 048174 83 AYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAAEGRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKF 162 (1303)
Q Consensus 83 Ay~~m~~~~~~QsIiisGESGaGKTe~~k~i~~yLa~~~~~~~~~~~~ie~~il~snpiLEAFGNAkT~rN~NSSRfGK~ 162 (1303)
||++|+++++||||||||||||||||++|+||+|||.+++..+.....|+++|+++||||||||||||+|||||||||||
T Consensus 84 Ay~~m~~~~~nQsIiisGESGAGKTe~tK~i~~yla~~~~~~~~~~~~i~~~il~snpiLEAFGNAkT~rNdNSSRFGKf 163 (697)
T 1lkx_A 84 AYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVSSNQSPNGERISKMLLDSNPLLEAFGNAKTLRNDNSSRFGKY 163 (697)
T ss_dssp HHHHHHHHCCCEEEEEECSTTSSHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHBBCCSSCSSCBCSEEE
T ss_pred HHHHHHhcCCCcEEEecCCCCCCchhhHHHHHHHHHhhcCCCCCccccHHHHHHhcchHHHHhcCcccCCCCCcchhhee
Confidence 99999999999999999999999999999999999999873332335799999999999999999999999999999999
Q ss_pred EEEEEcCCCCeeeeEEeeeeecccceeecCCCCCceeeeeeccc-CChhhHhhcCCC-CCCCCccccCCCcccccCCCCH
Q 048174 163 VEIQFDKRGRISGAAIRTYLLERSRVCKISDPERNYHCFYLLCA-APPDEIERYKLG-NPTSFHYLNQSNCYELVGVNDA 240 (1303)
Q Consensus 163 i~l~f~~~g~i~Ga~i~~yLLEksRvv~q~~~ERNfHIFYqll~-~~~~~~~~l~L~-~~~~~~yl~~~~~~~~~~~dd~ 240 (1303)
|+|+||.+|.|+||+|.+|||||||||.|++||||||||||||+ +++++++.|+|. ++.+|+||++++|+.++++||+
T Consensus 164 i~i~F~~~g~i~Ga~I~~yLLEKSRVv~q~~gERnfHIFYqllaG~~~~~~~~l~L~~~~~~y~yL~~~~~~~~~~~dD~ 243 (697)
T 1lkx_A 164 MEMQFNAVGSPIGGKITNYLLEKSRVVGRTQGERSFHIFYQMLKGLSQSKLDELGLTPNAPAYEYLKKSGCFDVSTIDDS 243 (697)
T ss_dssp EEEEECTTCCEEEEEEEEECCCGGGGTCCCTTCCCBHHHHHHHTTSCHHHHHHHTCCSCGGGSHHHHHTTCCCCTTCCHH
T ss_pred EEEEECCCCCEeeeeeeeeeccCceeeeecCCCCceeehhHHhcCCCHHHHHHhcCCCChhhCccccCCCCcccCCCchH
Confidence 99999999999999999999999999999999999999999999 788999999998 9999999999999999999999
Q ss_pred HHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHhcCeeeee-----cCCccceecCcccHHHHHHHHHhcCCCHHHHHHHH
Q 048174 241 NDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEK-----GEEDSSVVKDNESKFHLQMTAKLLMCDPGELEDAL 315 (1303)
Q Consensus 241 ~~f~~~~~Al~~lG~~~~~~~~I~~ilaaILhLGni~F~~-----~~~d~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~L 315 (1303)
++|.+|+.||++|||+++++.+||+|||||||||||+|.+ ++.+.+.+.+ ...++.||.||||++++|.++|
T Consensus 244 ~~f~~~~~Am~~lG~~~~e~~~i~~ilaaILhLGNi~F~~~~~~~~~~~~~~v~~---~~~l~~~a~LLgv~~~~L~~~L 320 (697)
T 1lkx_A 244 GEFKIIVKAMETLGLKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSD---TKSLAAAASCLKTDQQSLSIAL 320 (697)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEEETTC----CEEEESS---HHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcccceEeecccccCCCCcceeCC---HHHHHHHHHhhCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999987 2225566654 3579999999999999999999
Q ss_pred hhceeeeC----CceeeccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcCCCCceEEEeeeccccccCCCCCHHH
Q 048174 316 CKRVMITP----EEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIGQDPHSKCLIGVLDIYGFESFESNSFEQ 391 (1303)
Q Consensus 316 ~~~~~~~~----~e~i~~~l~~~~A~~~Rdalak~LY~~LF~wiV~~iN~~l~~~~~~~~~IgiLDI~GFE~f~~NsfEQ 391 (1303)
|+|++.++ +|.++++++++||.++||||||+||++||+|||.+||.+|........+||||||||||+|+.|||||
T Consensus 321 ~~r~~~~~~g~~~e~i~~~l~~~qA~~~rdalaK~lY~rLF~wlV~~IN~~l~~~~~~~~~IGvLDI~GFE~f~~NsFEQ 400 (697)
T 1lkx_A 321 CYRSISTGVGKRCSVISVPMDCNQAAYSRDALAKALYERLFNWLVSKINTIINCTTEKGPVIGILDIYGFEVFQNNSFEQ 400 (697)
T ss_dssp HBCC----------CCCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCCCCEEEEEECCCCCCCSSBCHHH
T ss_pred hccEEeeccCCCCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCceeEEeeccccccccCcCCHHH
Confidence 99999999 99999999999999999999999999999999999999999766668899999999999999999999
Q ss_pred HHHHhhhHHHHhHHhHhhHHhhHhhhhccCCCcccccccChHHHHHhhhcCCCcccccchhhhcCCCCchHHHHHHHHHH
Q 048174 392 FCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDWSYVHFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLYQT 471 (1303)
Q Consensus 392 lcINyaNEkLq~~f~~~vf~~eq~ey~~EgI~w~~i~~~dn~~~ldlie~~p~Gil~lLdee~~~p~~td~~f~~kl~~~ 471 (1303)
||||||||||||+||+|||+.||+||.+|||+|.+|+|.||++|||||+++|.|||+||||||++|++||.+|++||++.
T Consensus 401 lcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~dN~~~idLie~kp~GilslLDEec~~p~~tD~~f~~kl~~~ 480 (697)
T 1lkx_A 401 LNINFCNEKLQQLFIELTLKSEQEEYVREGIEWKNIEYFNNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQ 480 (697)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCSCCCHHHHHTTSSSSSHHHHHHHHHHSTTCCHHHHHHHHHHH
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCHHHHHHHhcccCChhhhhHHhhCCCCCChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCcccCCC------CCCCcEEEccCCCcchhhhhhhhhccchhHHHHHHHHhhchhhhhhccCCCCcccccCCCCc
Q 048174 472 FKDHKRFIKPKL------TRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLFPPISEETTKSSKF 545 (1303)
Q Consensus 472 ~~~~~~f~~p~~------~~~~F~I~HyaG~V~Y~~~gflekN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~~~~~~~~~ 545 (1303)
+++|++|.+|+. ....|+|+||||+|+|+++|||+||+|.++++++.||++|+++||+.||+.... ..+..++
T Consensus 481 ~~~~~~f~~~~~~~~k~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~~~~l~~lf~~~~~-~~~~~r~ 559 (697)
T 1lkx_A 481 FEKNPHLQSYVVSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSDPLVQGLFPPTRP-EDSKKRP 559 (697)
T ss_dssp SSSSTTEECTTTSCCTTSCTTEEEEEETTEEEEEECTTHHHHHHCCCCHHHHHHHHTCCSHHHHHHCC------------
T ss_pred hcCCCccccCCCCCCCccccCceeeeeeeeEEEEccCChhhhhcccccHHHHHHHhccchHHHHHhcccccc-ccccCCC
Confidence 999999998652 357899999999999999999999999999999999999999999999986432 2233467
Q ss_pred cchhHhhHhhHHHHHHHHccCCCeeEEecCCCCCCCCCcCCccccccceecccHHHHHHHHhhCCCcccCHHHHHHhhcc
Q 048174 546 SSIGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGI 625 (1303)
Q Consensus 546 ~tv~~~fk~sL~~Lm~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gvle~iri~~~Gyp~r~~~~eF~~Ry~~ 625 (1303)
+||+++||.||+.||++|++|+||||||||||+.+.|+.||..+|++||||+||||+|||+|+|||+|++|.+|+.||++
T Consensus 560 ~Tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~~~eF~~RY~~ 639 (697)
T 1lkx_A 560 ETAGSQFRNAMNALITTLLACSPHYVRCIKSNDNKQAGVIDEDRVRHQVRYLGLLENVRVRRAGFAGRIEYTRFYNRYKM 639 (697)
T ss_dssp CCHHHHHHHHHHHHHHHHTTSEEEEEEEECCCTTCCTTCCCHHHHHHHHHHHTSHHHHHHHHHSCSBCCBSHHHHTTSCS
T ss_pred CcHHHHHHHHHHHHHHHHHccCCcceEeecCCCcCCCCCcChhhccccCcccccHHHHHHHhcCCCccccHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhcc-ccchHHHHHHHHHhcCCC--Ccccccccceeccc-hhhHHHHHHHhhh
Q 048174 626 LLPEIRKQ-NYDEKIACKWILEKMDLK--GYQIGKTKVFLKAG-QMAELDAKRAKLL 678 (1303)
Q Consensus 626 L~~~~~~~-~~~~~~~~~~il~~~~~~--~~~iGkTkVFlr~~-~~~~LE~~R~~~l 678 (1303)
|+|..+.. ..+++++|+.||..++++ +|++|+||||||++ ++..||.+|.+++
T Consensus 640 L~~~~~~~~~~~~k~~~~~ll~~~~~~~~~~~~G~TKVF~r~~~~l~~LE~~R~~~l 696 (697)
T 1lkx_A 640 LCKKTWPSFNGTAKQATELILQQHNIDKEEIRMGKTKVFIRNPTTLFYFEEKRELEM 696 (697)
T ss_dssp SSCC---------CHHHHHHHHTTCCCGGGEEECSSBEEESSSHHHHHHHTCC----
T ss_pred hCcccccccCCCHHHHHHHHHHHcCCCcCcEEeCCeeEEEeCCchHHHHHHHHHhhC
Confidence 99876532 357889999999999876 89999999999996 7899999988764
No 8
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=100.00 E-value=1.8e-191 Score=1840.67 Aligned_cols=718 Identities=36% Similarity=0.634 Sum_probs=660.4
Q ss_pred CCCCCccCCCCCChHHHHHHHHHHhhcCceeeeccCeeEeeCCCCCCCCCCcHHHHHHhcCCCCCCCCchHHHHHHHHHH
Q 048174 6 GGADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGVPFGKLSPHVFAIADAAYR 85 (1303)
Q Consensus 6 ~~~~Dl~~L~~l~E~~vL~~L~~Ry~~~~iYT~~G~iLiavNP~~~l~~ly~~~~~~~y~~~~~~~~~PHifavA~~Ay~ 85 (1303)
.++|||+.|++|||++||+||+.||..+.||||+|+||||||||+.+| +|+++++..|+++..+++||||||||+.||+
T Consensus 60 ~~~~Dl~~L~~l~e~~vl~nL~~Ry~~~~iYTy~G~ilvavNPyk~l~-iy~~~~~~~Y~~~~~~~~pPHifaiA~~Ay~ 138 (995)
T 2ycu_A 60 SKAEDMAELTCLNEASVLHNLRERYYSGLIYTYSGLFCVVINPYKQLP-IYTEAIVEMYRGKKRHEVPPHVYAVTEGAYR 138 (995)
T ss_dssp TTCSBGGGCSSCSHHHHHHHHHHHHHTTCCEEEETTEEEEECCSSCCS-CCSHHHHHHHTTCCGGGSCCCHHHHHHHHHH
T ss_pred cccchhhhhccccHHHHHHHHHHHHhcCceeeecCceeeeeCCccccC-CCCHHHHHHhcCCccCCCCchHHHHhHHHHH
Confidence 589999999999999999999999999999999999999999999998 9999999999999999999999999999999
Q ss_pred HHHHcCCCeEEEEeCCcCCCchhhHHHHHHHHHHHhCCCCcC-----CCcHHHHHHhhchHHHhhcccccccCCCCCccc
Q 048174 86 EMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAAE-----GRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFG 160 (1303)
Q Consensus 86 ~m~~~~~~QsIiisGESGaGKTe~~k~i~~yLa~~~~~~~~~-----~~~ie~~il~snpiLEAFGNAkT~rN~NSSRfG 160 (1303)
+|+.+++||||||||||||||||++|+||+|||.+++..... ..+|+++|+++||||||||||||+|||||||||
T Consensus 139 ~m~~~~~~QsIiisGESGAGKTe~~K~i~~yla~~~~~~~~~~~~~~~~~ie~~il~~npiLEAFGNAkT~rN~NSSRFG 218 (995)
T 2ycu_A 139 SMLQDREDQSILCTGESGAGKTENTKKVIQYLAHVASSPKGRKEPGVPGELERQLLQANPILEAFGNAKTVKNDNSSRFG 218 (995)
T ss_dssp HHHHHCCCEEEEEECBTTSSHHHHHHHHHHHHHHHSCCSSSCSSSCCCC-CCSTTTSHHHHHHHHHEECCSSCTTEESSE
T ss_pred HHHhcCCCcEEEecCCCCCCchhhHHHHHHHHHHhcccCCccccccccccHHHHHHHHHHHHHHhcCccCCCCCCCCccc
Confidence 999999999999999999999999999999999998654211 257899999999999999999999999999999
Q ss_pred ceEEEEEcCCCCeeeeEEeeeeecccceeecCCCCCceeeeeeccc-CChhhHhhcCCCCCCCCccccCCCcccccCCCC
Q 048174 161 KFVEIQFDKRGRISGAAIRTYLLERSRVCKISDPERNYHCFYLLCA-APPDEIERYKLGNPTSFHYLNQSNCYELVGVND 239 (1303)
Q Consensus 161 K~i~l~f~~~g~i~Ga~i~~yLLEksRvv~q~~~ERNfHIFYqll~-~~~~~~~~l~L~~~~~~~yl~~~~~~~~~~~dd 239 (1303)
|||+|+||.+|.|+||+|.+|||||||||.|++||||||||||||+ +++++++.|+|.++.+|+||++++ ..+++ ||
T Consensus 219 K~i~i~F~~~g~i~Ga~i~~yLLEksRvv~q~~~ERnfHIFYqll~g~~~~~~~~l~L~~~~~y~yl~~~~-~~~~~-dD 296 (995)
T 2ycu_A 219 KFIRINFDVAGYIVGANIETYLLEKSRAIRQAKDECSFHIFYQLLGGAGEQLKADLLLEPCSHYRFLTNGP-SSSPG-QE 296 (995)
T ss_dssp EEEEEEECTTSCEEEEEEEEECCCGGGGTCCCTTCCCBHHHHHHHHHCCHHHHHHTTCCCGGGCTTSTTCS-CSSTT-TH
T ss_pred eEEEEEECCCCCEeeeEEEEEeccCCeeeccCCCCCcchhHHHHHcCCCHHHHHHcCCCChHHcccccCCc-cccCC-cH
Confidence 9999999999999999999999999999999999999999999999 788999999999999999999987 57889 99
Q ss_pred HHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHhcCeeeeecCC-ccceecCcccHHHHHHHHHhcCCCHHHHHHHHhhc
Q 048174 240 ANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEE-DSSVVKDNESKFHLQMTAKLLMCDPGELEDALCKR 318 (1303)
Q Consensus 240 ~~~f~~~~~Al~~lG~~~~~~~~I~~ilaaILhLGni~F~~~~~-d~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~L~~~ 318 (1303)
+++|..|+.||++|||+++++.+||+|||||||||||+|....+ +.+.+.+. ..++.||.||||++++|.++||++
T Consensus 297 ~~~f~~~~~A~~~lg~~~~e~~~i~~ilaaILhlGni~F~~~~~~~~~~~~~~---~~l~~~a~LLgv~~~~L~~~l~~~ 373 (995)
T 2ycu_A 297 RELFQETLESLRVLGFSHEEIISMLRMVSAVLQFGNIALKRERNTDQATMPDN---TAAQKLCRLLGLGVTDFSRALLTP 373 (995)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHGGGCCCEECSSSCCEECSCC---HHHHHHHHHTTCCHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhccceEeecCCCcccccCCh---HHHHHHHHHHCCCHHHHHHHhcCc
Confidence 99999999999999999999999999999999999999998764 45555443 579999999999999999999999
Q ss_pred eeeeCCceeeccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcCCC-CceEEEeeeccccccCCCCCHHHHHHHhh
Q 048174 319 VMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIGQDPH-SKCLIGVLDIYGFESFESNSFEQFCINFT 397 (1303)
Q Consensus 319 ~~~~~~e~i~~~l~~~~A~~~Rdalak~LY~~LF~wiV~~iN~~l~~~~~-~~~~IgiLDI~GFE~f~~NsfEQlcINya 397 (1303)
++.+++|.|+++++++||.++||||||+||++||+|||.+||.+|+.... ...+||||||||||+|+.|||||||||||
T Consensus 374 ~~~~~~e~v~~~~~~~qa~~~rdalak~lY~~LF~wlV~~iN~~l~~~~~~~~~~IgvLDI~GFE~f~~NsfEQlcINy~ 453 (995)
T 2ycu_A 374 RIKVGRDYVQKAQTKEQADFALEALAKATYERLFRWLVLRLNRALDRSPRQGASFLGILDIAGFEIFQLNSFEQLCINYT 453 (995)
T ss_dssp EEESSSSEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCCCSEEEEEEECCCBCCCSSBCHHHHHHHHH
T ss_pred EEEcCCceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccceEEEeccccccccccchHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999986554 67899999999999999999999999999
Q ss_pred hHHHHhHHhHhhHHhhHhhhhccCCCcccccc-cChHHHHHhhhc--CCCcccccchhhhcCCCCchHHHHHHHHHHhcC
Q 048174 398 NEKLQQHFNQNVFKMEQNDYRNEEIDWSYVHF-VDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHENFSQKLYQTFKD 474 (1303)
Q Consensus 398 NEkLq~~f~~~vf~~eq~ey~~EgI~w~~i~~-~dn~~~ldlie~--~p~Gil~lLdee~~~p~~td~~f~~kl~~~~~~ 474 (1303)
||||||+||+|||+.||+||.+|||+|.+|+| .||++|||||++ +|.|||+||||||++|++||.+|++||+..|++
T Consensus 454 NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idlie~~~~p~Gil~lLdee~~~p~~tD~~f~~kl~~~~~~ 533 (995)
T 2ycu_A 454 NEKLQQLFNHTMFVLEQEEYQREGIPWTFLDFGLDLQPCIDLIERPANPPGLLALLDEECWFPKATDKSFVEKVAQEQGG 533 (995)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCSCCCHHHHHHHHCCSSSCCHHHHHHHSSSSTTCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhhHHHHHHHhccCCCccccccccChHHHHHHHhccCCCCchhhhhHHHhcCCCCchHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999 699999999998 489999999999999999999999999999999
Q ss_pred CCCcccCCCC--CCCcEEEccCCCcchhhhhhhhhccchhHHHHHHHHhhchhhhhhccCCCCcc-----------c---
Q 048174 475 HKRFIKPKLT--RSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLFPPISE-----------E--- 538 (1303)
Q Consensus 475 ~~~f~~p~~~--~~~F~I~HyaG~V~Y~~~gflekN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~-----------~--- 538 (1303)
|++|.+|+.. ...|+|+||||+|+|+++|||+||+|.|+++++.||++|+++||+.||+.... .
T Consensus 534 ~~~f~~~~~~~~~~~F~i~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~v~~lf~~~~~~~~~~~~~~~~~~~~ 613 (995)
T 2ycu_A 534 HPKFQRPRHLRDQADFSVLHYAGKVDYKANEWLMKNMDPLNDNVAALLHQSTDRLTAEIWKDVEGIVGLEQVSSLGDGPP 613 (995)
T ss_dssp STTEECCCTTTCCSSEEEEETTEEEEECCTTHHHHHHCCCCHHHHHHHHTCSSHHHHHHTSSCCSSCSCCC---------
T ss_pred CCCcccCCccCCCCeeEEECCCCCccccccchhhhccccccHHHHHHHHhCcHHHHHHHhhccccccccccccccccccc
Confidence 9999999864 57999999999999999999999999999999999999999999999986331 0
Q ss_pred --ccCCCCccchhHhhHhhHHHHHHHHccCCCeeEEecCCCCCCCCCcCCccccccceecccHHHHHHHHhhCCCcccCH
Q 048174 539 --TTKSSKFSSIGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTF 616 (1303)
Q Consensus 539 --~~~~~~~~tv~~~fk~sL~~Lm~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gvle~iri~~~Gyp~r~~~ 616 (1303)
..+.++++||+++||.||+.||++|++|+||||||||||+.+.|+.||..+|++||||+||||+|||+|+|||+|++|
T Consensus 614 g~~~~~~~~~tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~r~~~ 693 (995)
T 2ycu_A 614 GGRPRRGMFRTVGQLYKESLSRLMATLSNTNPSFVRCIVPNHEKRAGKLEPRLVLDQLRCNGVLEGIRICRQGFPNRILF 693 (995)
T ss_dssp ----CCCSSCCHHHHHHHHHHHHHHHHHTSEEEEEEEECCCSSCCTTCCCTTTHHHHHHHHTHHHHHHHHHHSCCEEEEH
T ss_pred ccCcCCCCCCchHHHHHHHHHHHHHHHHhcCcceeeeecCCccccccccCHHHHHHHhcccchHHHHHHHHhcCCccccH
Confidence 012335789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccccchhcc-ccchHHHHHHHHHhcCCC--CcccccccceeccchhhHHHHHHHhhhchhHHHHhhhhhhhh
Q 048174 617 SEFLDRFGILLPEIRKQ-NYDEKIACKWILEKMDLK--GYQIGKTKVFLKAGQMAELDAKRAKLLGHSAEVIQSQHRRRV 693 (1303)
Q Consensus 617 ~eF~~Ry~~L~~~~~~~-~~~~~~~~~~il~~~~~~--~~~iGkTkVFlr~~~~~~LE~~R~~~l~~aA~~IQ~~~R~~~ 693 (1303)
.+|+.||++|.|..++. ..|.+++|+.||..++++ .|+||+||||||++++..||.+|.+.+..+.
T Consensus 694 ~~F~~RY~~L~~~~~~~~~~d~~~~~~~ll~~~~~~~~~~~~G~tkVF~r~~~~~~LE~~R~~~l~~~e----------- 762 (995)
T 2ycu_A 694 QEFRQRYEILTPNAIPKGFMDGKQACEKMIQALELDPNLYRVGQSKIFFRAGVLAQLEEERASEQTKSD----------- 762 (995)
T ss_dssp HHHHHHHGGGSTTTSCSCCCCSCCSCCCSCCCSSEEESSEEEESSCTTHHHHHHHHHHHHHHHHHHHHH-----------
T ss_pred HHHHHHHHHhCcccccccCCCHHHHHHHHHHHcCCChhheeecceEEEEecchhhhHHHHHHHHhhhhh-----------
Confidence 99999999999886543 457788999999988774 8999999999999999999999999877642
Q ss_pred hhhhhhhhhhHHHHHHhhccccceeccccccchhhhHHHHHHHHHHHHHHHhhcch
Q 048174 694 TQKHYITLVQAAVCIQSSCRGILARRYCKVKKKEAAAVKIQKNSRTMMTRKAYSNV 749 (1303)
Q Consensus 694 ~Rk~y~~~r~aai~IQa~~Rg~laRk~~~~~r~~~AAi~IQ~~~Rg~~aRr~~~k~ 749 (1303)
|. .-+..++.|+|+..++..++.. ..++..||+.||++..+++..+.
T Consensus 763 ----Ye---~~a~~Ll~WIr~k~a~l~~r~~--~~sl~~IQ~~ir~f~~fr~~ekp 809 (995)
T 2ycu_A 763 ----YL---KRANELVQWINDKQASLESRDF--GDSIESVQSFMNAHKEYKKTEKP 809 (995)
T ss_dssp ----HH---HHHHHHHHHTTTTTCCCSCHHH--HHHHHHHHHHHHHHTTHHHHTHH
T ss_pred ----HH---HHHHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHHHhcc
Confidence 21 1234567788888877655443 35778899999988777765543
No 9
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=100.00 E-value=1.3e-190 Score=1774.50 Aligned_cols=668 Identities=38% Similarity=0.699 Sum_probs=594.6
Q ss_pred CCCCCccCCCCCChHHHHHHHHHHhhcCceeeeccCeeEeeCCCCCCCCCCcHHHHHHhcCCCCCCCCchHHHHHHHHHH
Q 048174 6 GGADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGVPFGKLSPHVFAIADAAYR 85 (1303)
Q Consensus 6 ~~~~Dl~~L~~l~E~~vL~~L~~Ry~~~~iYT~~G~iLiavNP~~~l~~ly~~~~~~~y~~~~~~~~~PHifavA~~Ay~ 85 (1303)
.++|||+.|++|||++||+||+.||..+.||||+|+||||||||+.+| +|+++++++|+++..+++||||||||+.||+
T Consensus 85 ~~~eDl~~L~~LnE~svL~nL~~Ry~~~~IYTy~G~iLvavNPyk~l~-iY~~~~~~~Y~g~~~~~~pPHifaiA~~Ay~ 163 (783)
T 4db1_A 85 DKIEDMAMLTFLHEPAVLYNLKDRYGSWMIYTYSGLFCVTVNPYKWLP-VYTPEVVAAYRGKKRSEAPPHIFSISDNAYQ 163 (783)
T ss_dssp TTCSBGGGCSCCSHHHHHHHHHHHHHTTCCEEEETTEEEEECCSSCCS-CSSHHHHHHHTTCCGGGSCCCHHHHHHHHHH
T ss_pred CCcchhhccccccHHHHHHHHHHHhcCCceEEecCceeEecCCCccCC-CCCHHHHHHhcCCCcCCCCchhhHHHHHHHH
Confidence 589999999999999999999999999999999999999999999998 9999999999999999999999999999999
Q ss_pred HHHHcCCCeEEEEeCCcCCCchhhHHHHHHHHHHHhCCCCc-------CCCcHHHHHHhhchHHHhhcccccccCCCCCc
Q 048174 86 EMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAA-------EGRSVEQQVLESNPVLEAFGNAKTVKNNNSSR 158 (1303)
Q Consensus 86 ~m~~~~~~QsIiisGESGaGKTe~~k~i~~yLa~~~~~~~~-------~~~~ie~~il~snpiLEAFGNAkT~rN~NSSR 158 (1303)
+|+++++||||||||||||||||++|+||+|||.+++.... ...+|+++|+++||||||||||||+|||||||
T Consensus 164 ~m~~~~~nQsIiiSGESGAGKTe~tK~im~yla~v~~~~~~~~~~~~~~~~~ve~~il~snpiLEAFGNAkT~rNdNSSR 243 (783)
T 4db1_A 164 YMLTDRENQSILITGESGAGKTVNTKRVIQYFAVIAAIGDRSKKDQSPGKGTLEDQIIQANPALEAFGNAKTVRNDNSSR 243 (783)
T ss_dssp HHHHHTCCEEEEEECSTTSSHHHHHHHHHHHHHHHSBCCCC-------CCSCHHHHHHHHHHHHHHHHEECCSSCTTEEC
T ss_pred HHHhhCCCceEEEeCCCCCCCchHHHHHHHhhhhhccCCCccccccccccccHHHHHHHhHHHHHhccCcccCCCCCCCc
Confidence 99999999999999999999999999999999999864321 12579999999999999999999999999999
Q ss_pred ccceEEEEEcCCCCeeeeEEeeeeecccceeecCCCCCceeeeeeccc-CChhhHhhcCCC-CCCCCccccCCCcccccC
Q 048174 159 FGKFVEIQFDKRGRISGAAIRTYLLERSRVCKISDPERNYHCFYLLCA-APPDEIERYKLG-NPTSFHYLNQSNCYELVG 236 (1303)
Q Consensus 159 fGK~i~l~f~~~g~i~Ga~i~~yLLEksRvv~q~~~ERNfHIFYqll~-~~~~~~~~l~L~-~~~~~~yl~~~~~~~~~~ 236 (1303)
|||||+|+||.+|.|+||+|.+|||||||||.|++||||||||||||+ +++++++.|+|. +|.+|+||+++. ..+++
T Consensus 244 FGK~i~i~F~~~g~i~Ga~I~~YLLEKSRVv~q~~gERnfHIFYqLlaG~~~~~~~~l~L~~~~~~y~yl~~g~-~~~~~ 322 (783)
T 4db1_A 244 FGKFIRIHFGATGKLASADIETYLLEKSRVIFQLKAERDYHIFYQILSNKKPELLDMLLITNNPYDYAFISQGE-TTVAS 322 (783)
T ss_dssp SEEEEEEEECTTSBEEEEEEEEECCCGGGGTCCCTTCCSBHHHHHHHTCSSHHHHHHTTCCSCGGGCGGGCSSC-CCCTT
T ss_pred cceeEEEEECCCCCEeeeEEEEeecccceeeccCCCCCcchhHHHHHcCCCHHHHHHhccCCCHHHCccccCCC-cccCC
Confidence 999999999999999999999999999999999999999999999999 788999999994 799999999975 67999
Q ss_pred CCCHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHhcCeeeeecCC-ccceecCcccHHHHHHHHHhcCCCHHHHHHHH
Q 048174 237 VNDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEE-DSSVVKDNESKFHLQMTAKLLMCDPGELEDAL 315 (1303)
Q Consensus 237 ~dd~~~f~~~~~Al~~lG~~~~~~~~I~~ilaaILhLGni~F~~~~~-d~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~L 315 (1303)
+||+++|..|+.||++|||+++++.+||+|||||||||||+|....+ +.+.+.+. ..++.||.||||++++|.++|
T Consensus 323 ~dD~~~f~~~~~Am~~lGfs~~e~~~i~~ilaaILhLGNi~F~~~~~~~~~~~~~~---~~l~~~a~LLgv~~~~L~~aL 399 (783)
T 4db1_A 323 IDDAEELMATDNAFDVLGFTSEEKNSMYKLTGAIMHFGNMKFKLKQREEQAEPDGT---EEADKSAYLMGLNSADLLKGL 399 (783)
T ss_dssp CCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEECTTSSCEEESCC---HHHHHHHHHTTCCHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhccceeeccCCCcccccCCh---HHHHHHHHHhCCCHHHHHHhh
Confidence 99999999999999999999999999999999999999999998655 44444443 579999999999999999999
Q ss_pred hhceeeeCCceeeccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcCCCCceEEEeeeccccccCCCCCHHHHHHH
Q 048174 316 CKRVMITPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIGQDPHSKCLIGVLDIYGFESFESNSFEQFCIN 395 (1303)
Q Consensus 316 ~~~~~~~~~e~i~~~l~~~~A~~~Rdalak~LY~~LF~wiV~~iN~~l~~~~~~~~~IgiLDI~GFE~f~~NsfEQlcIN 395 (1303)
|+|++.+++|.++++++++||.++||||||+||+|||+|||.+||.+|.+......+||||||||||+|+.|||||||||
T Consensus 400 ~~~~i~~~~e~v~~~~~~~qA~~~rdalAK~lY~rLF~wlV~~IN~~l~~~~~~~~~IGvLDI~GFE~f~~NsFEQlCIN 479 (783)
T 4db1_A 400 CHPRVKVGNEYVTKGQNVQQVIYATGALAKAVYERMFNWMVTRINATLETKQPRQYFIGVLDIAGFEIFDFNSFEQLCIN 479 (783)
T ss_dssp HSCC------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCCSEEEEEEECCCCCCCSSCCHHHHHHH
T ss_pred cceEEEeCCeeEeeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCceEEEeccccccccccCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997766778999999999999999999999999
Q ss_pred hhhHHHHhHHhHhhHHhhHhhhhccCCCcccccc-cChHHHHHhhhcCCCcccccchhhhcCCCCchHHHHHHHHHHh-c
Q 048174 396 FTNEKLQQHFNQNVFKMEQNDYRNEEIDWSYVHF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHENFSQKLYQTF-K 473 (1303)
Q Consensus 396 yaNEkLq~~f~~~vf~~eq~ey~~EgI~w~~i~~-~dn~~~ldlie~~p~Gil~lLdee~~~p~~td~~f~~kl~~~~-~ 473 (1303)
||||||||+||+|||+.||+||.+|||+|.+|+| .||++|||||++ |.|||+||||||++|++||.+|++||+..| +
T Consensus 480 yaNEkLQq~Fn~~~F~~EqeeY~~EgI~w~~i~f~~Dn~~~idLiek-p~Gil~lLDEec~~p~~tD~tf~~kl~~~~~~ 558 (783)
T 4db1_A 480 FTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLQACIDLIEK-PMGIMSILEEECMFPKATDMTFKAKLFDNHLG 558 (783)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCGGGGGHHHHHHHHS-TTSHHHHHCC-TTCTTCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhHHHHHHhhhcCCCcccccccCChHHHHHHHhC-CCchHhhhhHHhcCCCCCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999 599999999996 789999999999999999999999999887 8
Q ss_pred CCCCcccCCCC----CCCcEEEccCCCcchhhhhhhhhccchhHHHHHHHHhhchhhhhhccCCCCccc-----c-----
Q 048174 474 DHKRFIKPKLT----RSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLFPPISEE-----T----- 539 (1303)
Q Consensus 474 ~~~~f~~p~~~----~~~F~I~HyaG~V~Y~~~gflekN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~~-----~----- 539 (1303)
+|++|.+|+.. ...|+|+||||+|+|+++|||+||+|.|+++++.||++|+++||+.||+..... +
T Consensus 559 ~~~~f~~~~~~k~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~~~~v~~lf~~~~~~~~~~~~~~~~~ 638 (783)
T 4db1_A 559 KSANFQKPRNIKGKPEAHFSLIHYAGIVDYNIIGWLQKNKDPLNETVVGLYQKSSLKLLSTLFANYAGADAPIEKGKGKA 638 (783)
T ss_dssp TCTTEECCCC----C-CCEEEEETTEEEEECCTTHHHHHHCCCCHHHHHHHHTCSSHHHHHHHHSCC-------------
T ss_pred CCCCccCCCCCCCCCCCCeEEeCcCCceEEeCcChhhhccccccHHHHHHHHHCccHHHHHHhhccccccccccCccCCC
Confidence 99999999864 478999999999999999999999999999999999999999999999753211 0
Q ss_pred cCCCCccchhHhhHhhHHHHHHHHccCCCeeEEecCCCCCCCCCcCCccccccceecccHHHHHHHHhhCCCcccCHHHH
Q 048174 540 TKSSKFSSIGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEF 619 (1303)
Q Consensus 540 ~~~~~~~tv~~~fk~sL~~Lm~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gvle~iri~~~Gyp~r~~~~eF 619 (1303)
.+.++++||+++||.||+.||++|++|+||||||||||+.|.|+.||..+|++||||+||||+|||+|+|||+|++|.+|
T Consensus 639 ~~~~~~~Tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~f~eF 718 (783)
T 4db1_A 639 KKGSSFQTVSALHRENLNKLMTNLRSTHPHFVRCIIPNETKSPGVMDNPLVMHQLRCNGVLEGIRICRKGFPNRILYGDF 718 (783)
T ss_dssp -----CCCHHHHHHHHHHHHHHHHHTSEEEEEEEECCCSSCCTTCCCHHHHHHHHHHSSHHHHHHHHHTSCCEEEEC---
T ss_pred CcCCCCccHHHHHHHHHHHHHHHHHccCCEEEEeeCCCcccCCCcccchhhheeccccChHhheeehhcCCCccCcHHHH
Confidence 12235689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccchhccc--cchHHHHHHHHHhcCCC--CcccccccceeccchhhHHHHHHHhhhc
Q 048174 620 LDRFGILLPEIRKQN--YDEKIACKWILEKMDLK--GYQIGKTKVFLKAGQMAELDAKRAKLLG 679 (1303)
Q Consensus 620 ~~Ry~~L~~~~~~~~--~~~~~~~~~il~~~~~~--~~~iGkTkVFlr~~~~~~LE~~R~~~l~ 679 (1303)
+.||++|+|..+... .|.+++|+.||..++++ .|+||+||||||+++++.||.+|.+.+.
T Consensus 719 ~~RY~~L~~~~~~~~~~~d~k~~~~~ll~~~~~~~~~~~~G~TKVFlr~g~~~~LE~~R~~~l~ 782 (783)
T 4db1_A 719 RQRYRILNPAAIPEGQFIDSRKGAEKLLSSLDIDHNQYKFGHTKVFFKAGLLGLLEEMRDERLS 782 (783)
T ss_dssp -----------------------CCHHHHSSSSCGGGEEECSSEEEECTTHHHHHHHHC-----
T ss_pred HHHHHHhCccccCCCCCCCHHHHHHHHHHhCCCCcCeEEECCEEEEECcCHHHHHHHHHHHHhc
Confidence 999999999866433 57899999999999875 7999999999999999999999988764
No 10
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=100.00 E-value=1.7e-189 Score=1773.60 Aligned_cols=682 Identities=41% Similarity=0.700 Sum_probs=622.5
Q ss_pred CCCCCCCccCCCCCChHHHHHHHHHHhhcCceeeeccCeeEeeCCCCCCCCCCcHHHHHHhcCCCCCCCCchHHHHHHHH
Q 048174 4 PAGGADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGVPFGKLSPHVFAIADAA 83 (1303)
Q Consensus 4 ~~~~~~Dl~~L~~l~E~~vL~~L~~Ry~~~~iYT~~G~iLiavNP~~~l~~ly~~~~~~~y~~~~~~~~~PHifavA~~A 83 (1303)
...++|||+.|++|||++||+||+.||..+.||||+|+||||||||+.+|++|+++++..|+++..+++||||||||+.|
T Consensus 51 ~~~~~~Dl~~L~~L~E~svL~nL~~Ry~~~~IYTy~G~iLiaVNPyk~l~~iY~~~~~~~Y~g~~~~~~pPHifaiA~~A 130 (784)
T 2v26_A 51 SKKDVEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPHVFAIADKA 130 (784)
T ss_dssp SSCCCSBGGGSSSCSHHHHHHHHHHHHHTTCCEEEETTEEEEECCSSCCTTTTSHHHHHHHTTCCTTSSCSCHHHHHHHH
T ss_pred cccccchhhhhhhccHHHHHHHHHHHHhcCceeeeccceEEEecCCcCcCCCCCHHHHHHHhCCCcccCCchHHHHHHHH
Confidence 45689999999999999999999999999999999999999999999997799999999999999999999999999999
Q ss_pred HHHHHHcCCCeEEEEeCCcCCCchhhHHHHHHHHHHHhCCCCcCCCcHHHHHHhhchHHHhhcccccccCCCCCcccceE
Q 048174 84 YREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAAEGRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFV 163 (1303)
Q Consensus 84 y~~m~~~~~~QsIiisGESGaGKTe~~k~i~~yLa~~~~~~~~~~~~ie~~il~snpiLEAFGNAkT~rN~NSSRfGK~i 163 (1303)
|++|+++++||||||||||||||||++|+||+|||.+++.. ..|+++|+++||||||||||||+||||||||||||
T Consensus 131 y~~m~~~~~nQsIiiSGESGAGKTe~tK~i~~yla~~~~~~----~~ie~~il~snpiLEAFGNAKT~rNdNSSRFGKfi 206 (784)
T 2v26_A 131 FRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTG----QDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFV 206 (784)
T ss_dssp HHHHHHHTCCEEEEEECSTTSSHHHHHHHHHHHHHHHHC----------CHHHHTHHHHHHHHEECCSSCTTEECSEEEE
T ss_pred HHHHHhcCCCcEEEEcCCCCCCceehHHHHHHHHHhhcCCC----CcHHHHHHHHHHHHHHhCCCcCCCCCCcchhheEE
Confidence 99999999999999999999999999999999999987632 47999999999999999999999999999999999
Q ss_pred EEEEcCCCCeeeeEEeeeeecccceeecCCCCCceeeeeeccc-CChhhHhhcCCCCCCCCccccCCCc-----------
Q 048174 164 EIQFDKRGRISGAAIRTYLLERSRVCKISDPERNYHCFYLLCA-APPDEIERYKLGNPTSFHYLNQSNC----------- 231 (1303)
Q Consensus 164 ~l~f~~~g~i~Ga~i~~yLLEksRvv~q~~~ERNfHIFYqll~-~~~~~~~~l~L~~~~~~~yl~~~~~----------- 231 (1303)
+|+||.+|.|+||+|.+|||||||||.|++||||||||||||+ +++++++.|+|.++.+|+||+++.+
T Consensus 207 ~i~F~~~g~i~Ga~I~~YLLEKSRVv~q~~gERNfHIFYqLlaG~~~~~~~~l~L~~~~~y~yL~~g~~~~~~~~~~~~~ 286 (784)
T 2v26_A 207 EIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQ 286 (784)
T ss_dssp EEEECTTSCEEEEEEEEECCCCGGGTCCCTTCCSBHHHHHHHHHSCHHHHHHTTCCCGGGCHHHHTSCCCCBCCHHHHTT
T ss_pred EEEEecCCcEeeeeeeeeeccCCeEeeecCCCCcchhhHHHHcCCCHHHHHHcCCCChhhCccccCCCcccccccccccc
Confidence 9999999999999999999999999999999999999999999 8889999999999999999998753
Q ss_pred ---------------ccccCCCCHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHhcCeeeeecCC--ccceecCcccH
Q 048174 232 ---------------YELVGVNDANDYLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEE--DSSVVKDNESK 294 (1303)
Q Consensus 232 ---------------~~~~~~dd~~~f~~~~~Al~~lG~~~~~~~~I~~ilaaILhLGni~F~~~~~--d~~~~~~~~~~ 294 (1303)
..++++||+++|..|+.||++|||+++++.+||+|||||||||||+|.+..+ +++.+.+ .+.
T Consensus 287 i~~~~~s~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lG~~~~e~~~i~~ilaaILhLGNi~F~~~~~~~~~~~v~~-~~~ 365 (784)
T 2v26_A 287 ILQNRKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKN-KST 365 (784)
T ss_dssp SCGGGCCHHHHHHCCBCCSSCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTCCEEECTTTTSSEEECG-GGH
T ss_pred ccccccccccccccccCCCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccceeeeccCCCCcccccc-CCH
Confidence 2456899999999999999999999999999999999999999999988433 3444433 245
Q ss_pred HHHHHHHHhcCCCHHHHHHHHhhceee-----eCCceeeccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcCCCC
Q 048174 295 FHLQMTAKLLMCDPGELEDALCKRVMI-----TPEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIGQDPHS 369 (1303)
Q Consensus 295 ~~l~~~a~LLgv~~~~L~~~L~~~~~~-----~~~e~i~~~l~~~~A~~~Rdalak~LY~~LF~wiV~~iN~~l~~~~~~ 369 (1303)
..++.||.||||++++|.++||+|++. ++|+.|+++++++||.++||||||+||++||+|||.+||.+|... ..
T Consensus 366 ~~l~~~a~LLgv~~~~L~~aL~~r~~~t~~g~~~ge~i~~~l~~~qA~~~rdalaK~lY~rLF~wlV~~IN~~l~~~-~~ 444 (784)
T 2v26_A 366 QALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFE-TS 444 (784)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHEEEC-----------CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCS-CC
T ss_pred HHHHHHHHHhCCCHHHHHHHHhhcEEeccccCCCCCeEeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-cc
Confidence 689999999999999999999999987 678999999999999999999999999999999999999999754 35
Q ss_pred ceEEEeeeccccccCCCCCHHHHHHHhhhHHHHhHHhHhhHHhhHhhhhccCCCcccccccChHHHHHhhhcCCCccccc
Q 048174 370 KCLIGVLDIYGFESFESNSFEQFCINFTNEKLQQHFNQNVFKMEQNDYRNEEIDWSYVHFVDNQDVLDLIEKKPGGIIAL 449 (1303)
Q Consensus 370 ~~~IgiLDI~GFE~f~~NsfEQlcINyaNEkLq~~f~~~vf~~eq~ey~~EgI~w~~i~~~dn~~~ldlie~~p~Gil~l 449 (1303)
..+||||||||||+|+.|||||||||||||||||+||+|||+.||+||.+|||+|.+|+|.||++|||||+++|.|||+|
T Consensus 445 ~~~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~DN~~~idLie~kp~GIlsl 524 (784)
T 2v26_A 445 SYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDI 524 (784)
T ss_dssp SEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHHHHHHCTTTSHHHH
T ss_pred cceeeecccCCcccCCcCCHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhcCCCcccccccChHHHHHHHhhccccHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhcCCCCchHHHHHHHHHHhcCCCCcccCCCC----------CCCcEEEccCCCcchhhhhhhhhccchhHHHHHHH
Q 048174 450 LDEACMFPKSTHENFSQKLYQTFKDHKRFIKPKLT----------RSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDL 519 (1303)
Q Consensus 450 Ldee~~~p~~td~~f~~kl~~~~~~~~~f~~p~~~----------~~~F~I~HyaG~V~Y~~~gflekN~D~l~~~~~~l 519 (1303)
|||||++|++||++|++||++.+++|++|.+|+.+ ...|+|+||||+|+|+++|||+||+|.|+++++.|
T Consensus 525 LDEe~~~p~~tD~~f~~kl~~~~~~~~~~~~p~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~l 604 (784)
T 2v26_A 525 LDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESL 604 (784)
T ss_dssp HHHHHHSSSCCHHHHHHHHHHHTTTCTTEECGGGCSSGGGTTSCTTSEEEEEETTEEEEEECTTHHHHTBCCCCHHHHHH
T ss_pred HHHHhcCCCCChHHHHHHHHHHhCCCcccccCCCccccccccccCCCceEeeecCccEeeeccCHHHhccchhhHHHHHH
Confidence 99999999999999999999999999999888643 25899999999999999999999999999999999
Q ss_pred HhhchhhhhhccCCCCcccc------cCCCCccchhHhhHhhHHHHHHHHccCCCeeEEecCCCCCCCCCcCCccccccc
Q 048174 520 LSASECSFVSGLFPPISEET------TKSSKFSSIGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQ 593 (1303)
Q Consensus 520 l~~S~~~~i~~lf~~~~~~~------~~~~~~~tv~~~fk~sL~~Lm~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~Q 593 (1303)
|++|+++||+.||+...... .+..++.||+++||.||+.||++|++|+||||||||||+.+.|+.||..+|++|
T Consensus 605 l~~S~~~~l~~Lf~~~~~~~~~~~~~~~~~~~~Tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~Q 684 (784)
T 2v26_A 605 ICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQ 684 (784)
T ss_dssp HHTCSCHHHHHHC----------------CCCCBHHHHHHHHHHHHHHHHHTSEEEEEEEECCCSSCCSSCCCHHHHHHH
T ss_pred HHhchhhHHHHHcccccccccCcccCCCCCccccHHHHHHHHHHHHHHHHHccCCeeEEEecCCcccccCcccccccccc
Confidence 99999999999998642111 112246899999999999999999999999999999999999999999999999
Q ss_pred eecccHHHHHHHHhhCCCcccCHHHHHHhhcccccchhccccchHHHHHHHHHhcCCC--CcccccccceeccchhhHHH
Q 048174 594 LRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRKQNYDEKIACKWILEKMDLK--GYQIGKTKVFLKAGQMAELD 671 (1303)
Q Consensus 594 Lr~~gvle~iri~~~Gyp~r~~~~eF~~Ry~~L~~~~~~~~~~~~~~~~~il~~~~~~--~~~iGkTkVFlr~~~~~~LE 671 (1303)
|||+||||+|||+|+|||+|++|.+|+.||++|+|..+. ..|++.+|+.||..++++ +|+||+||||||+++++.||
T Consensus 685 Lr~~GvlE~iri~r~Gyp~R~~f~eF~~RY~~L~~~~~~-~~d~~~~~~~ll~~~~~~~~~~~~G~TKVF~r~g~~~~le 763 (784)
T 2v26_A 685 LQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKLA-RLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 763 (784)
T ss_dssp HHHTTHHHHHHHHTSCCSEEEEHHHHHHHHGGGCCHHHH-TSCHHHHHHHHHHHTTCCGGGEEECSSEEEECTTCHHHHH
T ss_pred ccccccHHHHHHHHhcCCccccHHHHHHHHhhcCCcccC-CCCHHHHHHHHHHHcCCCcCcEEeCCceEEEcCCHHHHHH
Confidence 999999999999999999999999999999999987653 357899999999999875 89999999999999999999
Q ss_pred HHHHhhhchhHHHHhhhhhhhh
Q 048174 672 AKRAKLLGHSAEVIQSQHRRRV 693 (1303)
Q Consensus 672 ~~R~~~l~~aA~~IQ~~~R~~~ 693 (1303)
.++.......+. |++.+|+|+
T Consensus 764 ~~~~~~~~~~~~-ii~~v~~wl 784 (784)
T 2v26_A 764 QIMKSDPDHLAE-LVKRVNHWL 784 (784)
T ss_dssp HHHCCCHHHHHH-HHHHHHHHC
T ss_pred HHHhhCHHHHHH-HHHHHHhhC
Confidence 987766655544 557778875
No 11
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=100.00 E-value=8.2e-190 Score=1761.49 Aligned_cols=671 Identities=43% Similarity=0.782 Sum_probs=591.4
Q ss_pred CCCCCccCCCCCChHHHHHHHHHHhhcCceeeeccCeeEeeCCCCCCCCCCcHHHHHHhcCCCCCCCCchHHHHHHHHHH
Q 048174 6 GGADDMTKLSYLHEPGVLHNLATRYEINEIYTYTGNILIALNPFQPLSHLYDAYMMERYKGVPFGKLSPHVFAIADAAYR 85 (1303)
Q Consensus 6 ~~~~Dl~~L~~l~E~~vL~~L~~Ry~~~~iYT~~G~iLiavNP~~~l~~ly~~~~~~~y~~~~~~~~~PHifavA~~Ay~ 85 (1303)
.++|||+.|++|||++||+||+.||..+.||||+|+||||||||+++| +|+++++..|+++..+++||||||||+.||+
T Consensus 86 ~~~~Dl~~L~~l~E~svL~nL~~Ry~~~~IYTy~G~iLvavNPyk~l~-iY~~~~~~~Y~~~~~~~~pPHifaiA~~Ay~ 164 (770)
T 1w9i_A 86 DGVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRNEVAPHIFAISDVAYR 164 (770)
T ss_dssp TTCSBGGGCSCCCHHHHHHHHHHHHHTTCCEEEETTEEEEECCSSCCS-CCSHHHHHHHTTCCGGGSCCCHHHHHHHHHH
T ss_pred cchhhhhhhccCCHHHHHHHHHHHHhcCCceeccCceeEEecCCcccc-CCCHHHHHHhcCCCcCCCCccHHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999998 9999999999999999999999999999999
Q ss_pred HHHHcCCCeEEEEeCCcCCCchhhHHHHHHHHHHHhCCCC-cCCCcHHHHHHhhchHHHhhcccccccCCCCCcccceEE
Q 048174 86 EMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTA-AEGRSVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVE 164 (1303)
Q Consensus 86 ~m~~~~~~QsIiisGESGaGKTe~~k~i~~yLa~~~~~~~-~~~~~ie~~il~snpiLEAFGNAkT~rN~NSSRfGK~i~ 164 (1303)
+|+++++||||||||||||||||++|+||+|||.+++... ....+|+++|+++||||||||||||+||||||||||||+
T Consensus 165 ~m~~~~~nQsIiisGESGAGKTe~tK~i~~yla~~~~~~~~~~~~~ie~~il~snpiLEAFGNAkT~rNdNSSRFGKfi~ 244 (770)
T 1w9i_A 165 SMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIE 244 (770)
T ss_dssp HHHHHCCCEEEEEECSTTSSHHHHHHHHHHHHHHHHCC------CHHHHHHHHHHHHHHHHHEECCSSCTTEESSEEEEE
T ss_pred HHHhhcCCcEEEEecCCCCcchHHHHHHHHHHHHhccccCCcccCcHHHHHHHHHHHHHHhCCCcCCCCCCcCCcceEEE
Confidence 9999999999999999999999999999999999987532 123689999999999999999999999999999999999
Q ss_pred EEEcCCCCeeeeEEeeeeecccceeecCCCCCceeeeeeccc-CChhhHhhcCCCCCCCCcc-ccCCCcccccCCCCHHH
Q 048174 165 IQFDKRGRISGAAIRTYLLERSRVCKISDPERNYHCFYLLCA-APPDEIERYKLGNPTSFHY-LNQSNCYELVGVNDAND 242 (1303)
Q Consensus 165 l~f~~~g~i~Ga~i~~yLLEksRvv~q~~~ERNfHIFYqll~-~~~~~~~~l~L~~~~~~~y-l~~~~~~~~~~~dd~~~ 242 (1303)
|+||.+|.|+||+|.+|||||||||.|++||||||||||||+ +++++++.|+|.++.+|+| |+++ |..++++||+++
T Consensus 245 i~F~~~g~i~Ga~I~~yLLEKSRVv~q~~gERnfHIFYqLlaG~~~~~~~~l~L~~~~~y~yll~~g-~~~~~~~dD~~~ 323 (770)
T 1w9i_A 245 IQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSG-CVDIKGVSDSEE 323 (770)
T ss_dssp EEECTTSCEEEEEEEEECCCGGGGTCCCTTCCSBHHHHHHHHHCCHHHHHHHTCCCGGGCTTTSSSS-CCCCTTCCHHHH
T ss_pred EEECCCCCEeeeEEEEEeccCceeecccCCCCcchhHHHHhcCCCHHHHHHhCCCChhhccccccCC-ccccCCCchHHH
Confidence 999999999999999999999999999999999999999999 8889999999999999999 7765 578999999999
Q ss_pred HHHHHhhhhhccCCHHHHHHHHHHHHHHHHhcCeeeeecCCccceecCcccHHHHHHHHHhcCCCHHHHHHHHhhceeee
Q 048174 243 YLATRRAMDVIGISRKEQDAIFGVVAAILHLGNIEFEKGEEDSSVVKDNESKFHLQMTAKLLMCDPGELEDALCKRVMIT 322 (1303)
Q Consensus 243 f~~~~~Al~~lG~~~~~~~~I~~ilaaILhLGni~F~~~~~d~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~L~~~~~~~ 322 (1303)
|..|+.||++|||+++++.+||+|||||||||||+|....++.+.+.+. ..++.||.||||++++|.++||+|++.+
T Consensus 324 f~~~~~Am~~lGf~~~e~~~i~~ilaaILhLGNi~F~~~~~~~~~~~~~---~~l~~~a~LLgv~~~~L~~aL~~~~~~~ 400 (770)
T 1w9i_A 324 FKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDK---TALNAASTVFGVNPSVLEKALMEPRILA 400 (770)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCCEECSSSSEECSCC---HHHHHHHHHHTCCHHHHHHHHHSCEEEE
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCceEecCCCCccccCCh---HHHHHHHHHhCCCHHHHHHHhhCcEEEe
Confidence 9999999999999999999999999999999999999544455655543 5799999999999999999999999999
Q ss_pred CCceeeccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcCCCCceEEEeeeccccccCCCCCHHHHHHHhhhHHHH
Q 048174 323 PEEIIKKSLDPVAATVSRDGLAKTIYSRLFDWLVDKINVSIGQDPHSKCLIGVLDIYGFESFESNSFEQFCINFTNEKLQ 402 (1303)
Q Consensus 323 ~~e~i~~~l~~~~A~~~Rdalak~LY~~LF~wiV~~iN~~l~~~~~~~~~IgiLDI~GFE~f~~NsfEQlcINyaNEkLq 402 (1303)
++|.|+++++++||.++||||||+||+|||+|||.+||.+|..... ..+||||||||||+|+.||||||||||||||||
T Consensus 401 ~~e~v~~~~~~~qA~~~rdalaK~lY~rLF~wlV~~IN~~l~~~~~-~~~IGvLDI~GFE~F~~NsFEQlCINyaNEkLQ 479 (770)
T 1w9i_A 401 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERK-AYFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQ 479 (770)
T ss_dssp TTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCC-SEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHH
T ss_pred CCeeEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CCeeeeccCccccccccCCHHHHHHHhhHHHHH
Confidence 9999999999999999999999999999999999999999986555 889999999999999999999999999999999
Q ss_pred hHHhHhhHHhhHhhhhccCCCcccccc-cChHHHHHhhhc-CCCcccccchhhhcCCCCchHHHHHHHHH-HhcCCCCcc
Q 048174 403 QHFNQNVFKMEQNDYRNEEIDWSYVHF-VDNQDVLDLIEK-KPGGIIALLDEACMFPKSTHENFSQKLYQ-TFKDHKRFI 479 (1303)
Q Consensus 403 ~~f~~~vf~~eq~ey~~EgI~w~~i~~-~dn~~~ldlie~-~p~Gil~lLdee~~~p~~td~~f~~kl~~-~~~~~~~f~ 479 (1303)
|+||+|||+.||+||.+|||+|.+|+| .||++|||||++ +|.|||+||||||++|++||.+|++||+. .+++|++|.
T Consensus 480 q~Fn~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idLiek~~p~GilslLDEec~~p~~tD~~f~~kL~~~~~~~~~~f~ 559 (770)
T 1w9i_A 480 QFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYE 559 (770)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCCCCCCGGGGGHHHHHHHHCTTTTCHHHHHHHHHSSSSCCHHHHHHHHHHHHTTTSTTEE
T ss_pred HHHHhhhhHHHHHHhhccCCCceeeccccCcHHHHHHHhCCCCCchhhhhhhhhCCCCCChHHHHHHHHHHhcCCCCCcc
Confidence 999999999999999999999999999 599999999998 48999999999999999999999999765 568999999
Q ss_pred cCCCCCCCcEEEccCCCcchhhhhhhhhccchhHHHHHHHHhhchhhhhhccCCCCcc--cccCCCCccchhHhhHhhHH
Q 048174 480 KPKLTRSDFTIVHYAGEVHYQSDLFLDKNKDYVVAEHQDLLSASECSFVSGLFPPISE--ETTKSSKFSSIGSRFKLQLQ 557 (1303)
Q Consensus 480 ~p~~~~~~F~I~HyaG~V~Y~~~gflekN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~--~~~~~~~~~tv~~~fk~sL~ 557 (1303)
+|+.....|+|+||||+|+|+++|||+||+|.++++++.||++|+++||+.||+.... ...++++++||+++||.||+
T Consensus 560 ~p~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~~~~v~~Lf~~~~~~~~~~k~~~~~Tv~~~fk~sL~ 639 (770)
T 1w9i_A 560 EPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAAQYKEQLA 639 (770)
T ss_dssp CCSSCSSEEEEEETTEEEEEECTTHHHHHHCCCCHHHHHHHHTCSSTTHHHHHHCHHHHCCCEETTEECCHHHHHHHHHH
T ss_pred CCCCCCCceEeeccCccccccccChhhhccCcccHHHHHHHHhchHHHHHHHhhccCCCCCCCCCCCCcchhHHHHHHHH
Confidence 9998779999999999999999999999999999999999999999999999976321 12233456899999999999
Q ss_pred HHHHHHccCCCeeEEecCCCCCCCCCcCCccccccceecccHHHHHHHHhhCCCcccCHHHHHHhhcccccchhc-cccc
Q 048174 558 QLMDTLNSTEPHYIRCVKPNNELKPVILDSNNVMQQLRSGGVLEAIRVKCAGYPTRKTFSEFLDRFGILLPEIRK-QNYD 636 (1303)
Q Consensus 558 ~Lm~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gvle~iri~~~Gyp~r~~~~eF~~Ry~~L~~~~~~-~~~~ 636 (1303)
.||++|++|+||||||||||+.+.|+.||..+|++||||+||||+|||+|+|||+|++|.+|+.||++|+| .+. +..|
T Consensus 640 ~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~f~eF~~RY~~L~~-~~~~~~~d 718 (770)
T 1w9i_A 640 SLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAP-NVPRDAED 718 (770)
T ss_dssp HHHHHHHTSEEEEEEEECSCSSCCSSCCCHHHHHHHHHHSSHHHHHHHTTSSCCEEEESCC-------------------
T ss_pred HHHHHHHhcCceeeeeecCCcccccCccCchhhHhHhcccchHHHHHHHHhcCcccccHHHHHHHHHHhcc-ccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998 443 2457
Q ss_pred hHHHHHHHHHhcCCC--CcccccccceeccchhhHHHHHHHhhhchhHH
Q 048174 637 EKIACKWILEKMDLK--GYQIGKTKVFLKAGQMAELDAKRAKLLGHSAE 683 (1303)
Q Consensus 637 ~~~~~~~il~~~~~~--~~~iGkTkVFlr~~~~~~LE~~R~~~l~~aA~ 683 (1303)
.+++|+.||..++++ .|++|+||||||++++..||.+|.+.+..+++
T Consensus 719 ~k~~~~~lL~~~~~~~~~~~~G~TKVF~r~~~l~~LE~~R~~~l~~~~~ 767 (770)
T 1w9i_A 719 SQKATDAVLKHLNIDPEQFRFGITKIFFRAGQLARIEEARELRGDYKDD 767 (770)
T ss_dssp -----------------CCCCCSSEEEECTTTTTC--------------
T ss_pred HHHHHHHHHHhcCCCcccEEeCCeeEEecccHHHHHHHHHHHHHHHHhc
Confidence 899999999998775 89999999999999999999999999887654
No 12
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=99.90 E-value=5e-23 Score=269.32 Aligned_cols=277 Identities=15% Similarity=0.147 Sum_probs=157.9
Q ss_pred hhhhhhhhhhhHHHHHHhhccccceeccccccchhhhHHHHHHHHHHHHHHHhhcch--hHHHHHHHHHHHHHHHHHHHH
Q 048174 693 VTQKHYITLVQAAVCIQSSCRGILARRYCKVKKKEAAAVKIQKNSRTMMTRKAYSNV--KAAAIVLQAWLRARAAVRAMA 770 (1303)
Q Consensus 693 ~~Rk~y~~~r~aai~IQa~~Rg~laRk~~~~~r~~~AAi~IQ~~~Rg~~aRr~~~k~--r~aai~IQ~~~R~~~~~R~~~ 770 (1303)
+.+.+...+..+++.||++||||++|+.|.+++ .||+.||++||||++|++|..+ ..+++.||++||++..++.+.
T Consensus 759 LE~~R~~~l~~aa~~IQa~~Rg~l~Rk~~~~~r--~aai~IQ~~~Rg~~aR~~~~~lr~~~AAi~IQs~~Rg~~~Rk~y~ 836 (1080)
T 2dfs_A 759 LEKIRADKLRAACIRIQKTIRGWLMRKKYMRMR--RAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQ 836 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhH--HHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHhhHHHHHHHH
Confidence 444555667789999999999999999998775 5899999999999999998765 468999999777765555443
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhHHHHHHHHHHh--hhhHHhhhhhhhHHHHHHHHHHHHHHHHHHH--HHHHH--HHHh
Q 048174 771 ALSELRHRKHAKGALSIQTSWRGHRDFSYYKRLR--KASVFSQSRWRGIAARREFRKLKMTAKKEER--GQEIT--ESQE 844 (1303)
Q Consensus 771 arr~~~~~~~~~AA~~IQ~~~Rg~~aRr~~~~~~--kaav~IQ~~~R~~~aRkel~~lk~aa~~~~L--E~kl~--eL~r 844 (1303)
.. ..+++.||++|||+++|+.|..++ .+++.||++||++++|+.+++.+.++...+. ...+. ++.+
T Consensus 837 ~l--------r~aai~IQs~~Rg~laRr~~~~lr~~~aav~IQ~~~Rg~l~R~~y~~~~~aai~iQs~~R~~laRr~~~~ 908 (1080)
T 2dfs_A 837 CM--------RDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKK 908 (1080)
T ss_dssp HH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 32 258999999999999999998776 4899999999999999999876655544431 11111 1133
Q ss_pred hHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhhcchhhhhhccCCCccCcccCch
Q 048174 845 SQEAVQYIVDETSEVKECDITNKGIEVHVKECDTTDRAIEVYVKECDTKDRATEVHVEDCDDIDRAIEPHPITGKIPCSN 924 (1303)
Q Consensus 845 Le~ee~~r~eee~~~~E~~kL~~~ve~Le~qlee~e~~~~~le~e~~~~~~~~~~~~ee~~~~k~~l~e~~~~~e~~~~~ 924 (1303)
|..+.+.. +...+.+.+|+.++++|+.++++++++..++.+++...+.+ +..++.+.++
T Consensus 909 Lk~ear~~---~~l~~~~~~LE~kl~eLq~rL~~~e~~n~~L~~~~~~~~~~---~~~e~~~L~~--------------- 967 (1080)
T 2dfs_A 909 LKIEARSV---ERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEIT---YSTETEKLRS--------------- 967 (1080)
T ss_dssp C--------------------------------------------CHHHHHH---HHHHHHHHHH---------------
T ss_pred HHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH---HHHHHHHHHH---------------
Confidence 32222211 12345577888888888888887776666655553322211 2222222221
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 925 EEEEKIENLSAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLKKL----EETERRVYQLQDSLNRLLYCMSEQFSQL 1000 (1303)
Q Consensus 925 ~~~~ki~~L~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl----~e~E~~~~~Lq~el~~Le~kl~~le~El 1000 (1303)
..+.++.+++|+..++..+.+++++++++++++.++.++.+++.++. ++++..+..|++++..|++++.+|+..+
T Consensus 968 -~l~~le~~~~e~~~~~~~v~~L~~e~~~l~~~~~~~~ke~~~lee~~~~~~~~L~~kv~~L~~e~~~L~qq~~~l~~~~ 1046 (1080)
T 2dfs_A 968 -DVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRI 1046 (1080)
T ss_dssp -THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333344455555555555555555555555555554444443322 3555777788888888888888887665
Q ss_pred H
Q 048174 1001 K 1001 (1303)
Q Consensus 1001 ~ 1001 (1303)
.
T Consensus 1047 ~ 1047 (1080)
T 2dfs_A 1047 H 1047 (1080)
T ss_dssp H
T ss_pred H
Confidence 5
No 13
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=99.08 E-value=1.2e-10 Score=155.85 Aligned_cols=20 Identities=15% Similarity=0.227 Sum_probs=14.3
Q ss_pred HHHHHHHHHHhhHHHHHHHH
Q 048174 782 KGALSIQTSWRGHRDFSYYK 801 (1303)
Q Consensus 782 ~AA~~IQ~~~Rg~~aRr~~~ 801 (1303)
.|++.||++||+|+.|+.|.
T Consensus 819 ~a~~~iQ~~~r~~~~~k~~~ 838 (1184)
T 1i84_S 819 ESIFCIQYNVRSFMNVXHWP 838 (1184)
T ss_dssp HHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHhhhH
Confidence 46777777777777776653
No 14
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=98.89 E-value=2.3e-10 Score=98.02 Aligned_cols=55 Identities=31% Similarity=0.405 Sum_probs=50.1
Q ss_pred hhchhHHHHhhhhhhhhhhhhhhhhhhHHHHHHhhccccceeccccccchhhhHH
Q 048174 677 LLGHSAEVIQSQHRRRVTQKHYITLVQAAVCIQSSCRGILARRYCKVKKKEAAAV 731 (1303)
Q Consensus 677 ~l~~aA~~IQ~~~R~~~~Rk~y~~~r~aai~IQa~~Rg~laRk~~~~~r~~~AAi 731 (1303)
.++.+|+.||++||||++|+.|..++.|++.||++|||+++|+.|..++++.||+
T Consensus 3 ~~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~~r~~~aA~ 57 (58)
T 2ix7_C 3 KLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRRTKAAT 57 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 4678999999999999999999999999999999999999999999888877775
No 15
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=98.74 E-value=1.2e-09 Score=94.31 Aligned_cols=49 Identities=24% Similarity=0.555 Sum_probs=42.1
Q ss_pred cccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcchhhh
Q 048174 1085 VKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRDRA 1143 (1303)
Q Consensus 1085 ~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~ 1143 (1303)
+++||+|+.|+ |...++|+ |||+|++|||.|.....|..||++|++|.+
T Consensus 1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~e----------kp~~C~~C~k~F~~~~~L~~H~~~Htgepa 60 (60)
T 4gzn_C 1 SERPFFCNFCGKTYRDASGLSRHRRAHLGY----------RPRSCPECGKCFRDQSEVNRHLKVHQNKPA 60 (60)
T ss_dssp CCCCEECTTTCCEESSHHHHHHHHHHHHTC----------CCEECTTTCCEESSHHHHHHHGGGGSCC--
T ss_pred CCCCccCCCCCCEeCCHHHHHHHHHHhCCC----------cCeECCCCCCCcCCHHHHHHHhCccCCCCC
Confidence 36899999996 55667666 899999999999999999999999999753
No 16
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=98.69 E-value=4e-09 Score=86.64 Aligned_cols=46 Identities=22% Similarity=0.237 Sum_probs=38.1
Q ss_pred hhhHHHHHHhhccccceeccccccchhhhHHHHHHHHHHHHHHHhh
Q 048174 701 LVQAAVCIQSSCRGILARRYCKVKKKEAAAVKIQKNSRTMMTRKAY 746 (1303)
Q Consensus 701 ~r~aai~IQa~~Rg~laRk~~~~~r~~~AAi~IQ~~~Rg~~aRr~~ 746 (1303)
++.+++.||++|||+++|+.+..++++.||++||++||||.+|+.|
T Consensus 2 ~r~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y 47 (48)
T 1n2d_C 2 ISQAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV 47 (48)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence 4567788888888888888887777778999999999999999876
No 17
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=98.62 E-value=7.9e-08 Score=82.20 Aligned_cols=51 Identities=25% Similarity=0.233 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHHhhHHHHHHHHHHhhhhHHhhhhhhhHHHHHHHHHHHHHH
Q 048174 780 HAKGALSIQTSWRGHRDFSYYKRLRKASVFSQSRWRGIAARREFRKLKMTA 830 (1303)
Q Consensus 780 ~~~AA~~IQ~~~Rg~~aRr~~~~~~kaav~IQ~~~R~~~aRkel~~lk~aa 830 (1303)
.+.||+.||++||||++|+.|..++.+++.||++||++++|+.+..++.+.
T Consensus 4 ~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~~r~~~ 54 (58)
T 2ix7_C 4 LRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRRTK 54 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 357999999999999999999999999999999999999999999887654
No 18
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=98.28 E-value=1.6e-06 Score=71.13 Aligned_cols=21 Identities=24% Similarity=0.295 Sum_probs=15.4
Q ss_pred hHHHHHHHHHHHhhHHHHHHH
Q 048174 780 HAKGALSIQTSWRGHRDFSYY 800 (1303)
Q Consensus 780 ~~~AA~~IQ~~~Rg~~aRr~~ 800 (1303)
++.||+.||++||||.+|+.|
T Consensus 27 ~~~aai~IQ~~~Rg~~~Rk~y 47 (48)
T 1n2d_C 27 KVNCATLLQAAYRGHSIRANV 47 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHhh
Confidence 345777888888888877765
No 19
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=98.13 E-value=3.4e-07 Score=81.41 Aligned_cols=52 Identities=23% Similarity=0.680 Sum_probs=41.8
Q ss_pred cccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcchhh
Q 048174 1081 SMEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1081 ~~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.....+++|+|..|+ |...+.+ .++|+|++|++.|.+...|..||++|++++
T Consensus 10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~----------~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k 72 (74)
T 2lce_A 10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTG----------EKPYRCNICGAQFNRPANLKTHTRIHSGEK 72 (74)
T ss_dssp -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCC----------CCSEECTTTCCEESCHHHHHHHHHHHCCSC
T ss_pred cccCCCCCeECCCCCceeCCHHHHHHHHHHcCC----------CCCEECCCCCchhCCHHHHHHHHHhcCCCC
Confidence 344567899999996 3333433 389999999999999999999999999874
No 20
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=98.07 E-value=8.2e-07 Score=78.01 Aligned_cols=52 Identities=19% Similarity=0.438 Sum_probs=42.6
Q ss_pred cccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcchhh
Q 048174 1081 SMEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1081 ~~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
+++..+.+|+|..|+ |...+.++ ++|+|++|++.|.....|..||++|.+++
T Consensus 2 ss~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~----------~~~~C~~C~~~f~~~~~L~~H~~~h~~~~ 64 (70)
T 1x5w_A 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTD----------RPFKCNYCSFDTKQPSNLSKHMKKFHGDM 64 (70)
T ss_dssp CSCCCCCSEECSSSSCEESSHHHHHHHHGGGCCS----------CSEECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCC----------CCEeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence 345678899999996 34444433 88999999999999999999999999763
No 21
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=97.95 E-value=1.2e-06 Score=73.35 Aligned_cols=45 Identities=24% Similarity=0.688 Sum_probs=37.1
Q ss_pred ceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcchhh
Q 048174 1088 KWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1088 ~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
+|+|..|+ |...+.+ .+||+|++|++.|.+...|..|+++|.+++
T Consensus 1 p~~C~~C~~~f~~~~~l~~H~~~h~~----------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k 56 (57)
T 1bbo_A 1 KYICEECGIRXKKPSMLKKHIRTHTD----------VRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56 (57)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHHTSS----------CCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred CCcCCCCcCcCCCHHHHHHHHHhcCC----------CCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence 58999996 3333333 388999999999999999999999999864
No 22
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.94 E-value=1.7e-06 Score=76.43 Aligned_cols=50 Identities=22% Similarity=0.544 Sum_probs=41.1
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcchh
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRD 1141 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~ 1141 (1303)
.+..+.+|+|..|+ |...+.+ .+||+|++|++.|.+...|..||++|+++
T Consensus 8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~----------~~~~~C~~C~~~f~~~~~L~~H~~~H~~~ 68 (72)
T 1x6e_A 8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG----------EKPYKCLECGKAFSQNSGLINHQRIHTSG 68 (72)
T ss_dssp TTTTCCCEECSSSCCEESSHHHHHHHHHGGGC----------SCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred ccCCCCCccCCCCCCccCCHHHHHHHHHhcCC----------CCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence 35677899999996 3333433 38999999999999999999999999975
No 23
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.93 E-value=2.3e-06 Score=76.63 Aligned_cols=50 Identities=26% Similarity=0.652 Sum_probs=40.9
Q ss_pred cccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcchhh
Q 048174 1083 EWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1083 ~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
...+++|+|..|+ |...+.+ .++|+|++|++.|.....|..||++|++++
T Consensus 13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~----------~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~ 73 (77)
T 2cot_A 13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTG----------EKPYKCDECGKAFIQRSHLIGHHRVHTGSG 73 (77)
T ss_dssp CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC----------SCSEECSSSCCEESSHHHHHHHGGGSCCCC
T ss_pred CCCCCCEECCCCCcccCCHHHHHHHHHHcCC----------CcCeeCCCCCCccCCHHHHHHHHHHhCCCC
Confidence 3467899999996 3333333 389999999999999999999999999864
No 24
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=97.14 E-value=1.4e-06 Score=62.20 Aligned_cols=29 Identities=28% Similarity=0.634 Sum_probs=27.2
Q ss_pred CccccCccccccCccccchhHHhhcchhh
Q 048174 1114 KNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1114 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
|||+|++||+.|.....|..|+++|++++
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k 29 (29)
T 2lvt_A 1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK 29 (29)
Confidence 58999999999999999999999999874
No 25
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.91 E-value=2.5e-06 Score=64.18 Aligned_cols=31 Identities=29% Similarity=0.560 Sum_probs=28.6
Q ss_pred CCCccccCccccccCccccchhHHhhcchhh
Q 048174 1112 PPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1112 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
..++|+|++|++.|.+...|..|+++|++|+
T Consensus 6 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek 36 (36)
T 2elr_A 6 SGKTHLCDMCGKKFKSKGTLKSHKLLHTADG 36 (36)
T ss_dssp CCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred CCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence 4589999999999999999999999999864
No 26
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.90 E-value=2.4e-06 Score=66.42 Aligned_cols=30 Identities=20% Similarity=0.295 Sum_probs=27.9
Q ss_pred CCCccccCc--cccccCccccchhHHhhcchh
Q 048174 1112 PPKNYNCSF--CRREFRSAQALGGHMNVHRRD 1141 (1303)
Q Consensus 1112 ~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~~ 1141 (1303)
..|||+|++ |+|.|...+.|..||++|+++
T Consensus 6 gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~ 37 (38)
T 2eln_A 6 SGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL 37 (38)
T ss_dssp CCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred CCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence 459999987 999999999999999999985
No 27
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=97.89 E-value=2.1e-06 Score=63.88 Aligned_cols=29 Identities=21% Similarity=0.516 Sum_probs=27.5
Q ss_pred CccccCccccccCccccchhHHhhcchhh
Q 048174 1114 KNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1114 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
|||+|++||+.|.....|..||++|++++
T Consensus 1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~ 29 (33)
T 1rim_A 1 YKFACPECPKRFMRSDHLSKHITLHELLG 29 (33)
T ss_dssp CCCCCSSSCCCCSSHHHHHHHHHHHTTTC
T ss_pred CcccCCCCCchhCCHHHHHHHHHHhCCCC
Confidence 68999999999999999999999999875
No 28
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.89 E-value=2.4e-06 Score=60.55 Aligned_cols=29 Identities=28% Similarity=0.675 Sum_probs=27.1
Q ss_pred CccccCccccccCccccchhHHhhcchhh
Q 048174 1114 KNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1114 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
|||+|++|++.|.....|..|+++|++|+
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~ 29 (29)
T 2m0e_A 1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG 29 (29)
T ss_dssp CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence 68999999999999999999999999864
No 29
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=97.87 E-value=2.7e-06 Score=60.58 Aligned_cols=29 Identities=21% Similarity=0.543 Sum_probs=27.1
Q ss_pred CccccCccccccCccccchhHHhhcchhh
Q 048174 1114 KNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1114 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
|||+|+.||+.|.+...|..|+++|++++
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k 29 (29)
T 1rik_A 1 YKFACPECPKRFMRSDHLTLHILLHENKK 29 (29)
T ss_dssp CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence 68999999999999999999999999763
No 30
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.87 E-value=2.4e-06 Score=61.07 Aligned_cols=30 Identities=30% Similarity=0.729 Sum_probs=27.7
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||.|++||+.|.....|..||++|++++
T Consensus 1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k 30 (30)
T 2m0d_A 1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK 30 (30)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence 378999999999999999999999999764
No 31
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.87 E-value=2.9e-06 Score=64.03 Aligned_cols=31 Identities=23% Similarity=0.755 Sum_probs=28.6
Q ss_pred CCCccccCccccccCccccchhHHhhcchhh
Q 048174 1112 PPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1112 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
..+||+|++|++.|.....|..|+++|++++
T Consensus 6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2els_A 6 SGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36 (36)
T ss_dssp CCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred CCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence 4589999999999999999999999999864
No 32
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=97.86 E-value=3.3e-06 Score=77.98 Aligned_cols=50 Identities=22% Similarity=0.482 Sum_probs=40.9
Q ss_pred cccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHH-hhcchhh
Q 048174 1083 EWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHM-NVHRRDR 1142 (1303)
Q Consensus 1083 ~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~-~~h~~~~ 1142 (1303)
+....+|.|+.|+ |...++++ |||+|++|+|.|.....|..|+ ++|++|.
T Consensus 23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~----------k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~ 84 (85)
T 2lv2_A 23 SASAECHLCPVCGESFASKGAQERHLRLLHAA----------QVFPCKYCPATFYSSPGLTRHINKCHPSEN 84 (85)
T ss_dssp CCCCTTEECTTSCCEESSHHHHHHHHHTTSCS----------SSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred CCCCCCEECCCCCCCcCcHHHHhhhhhhccCC----------CccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence 3456789999996 45555554 8999999999999999999996 7898764
No 33
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.85 E-value=2.2e-06 Score=60.83 Aligned_cols=29 Identities=21% Similarity=0.615 Sum_probs=27.1
Q ss_pred CccccCccccccCccccchhHHhhcchhh
Q 048174 1114 KNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1114 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
+||+|++|++.|.+...|..|+++|++++
T Consensus 1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k 29 (29)
T 2m0f_A 1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK 29 (29)
T ss_dssp CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence 58999999999999999999999999864
No 34
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=97.85 E-value=3.3e-06 Score=65.05 Aligned_cols=32 Identities=88% Similarity=1.597 Sum_probs=29.3
Q ss_pred CCCccccCccccccCccccchhHHhhcchhhh
Q 048174 1112 PPKNYNCSFCRREFRSAQALGGHMNVHRRDRA 1143 (1303)
Q Consensus 1112 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~ 1143 (1303)
+.+||+|++||+.|.+...|..||++|++++.
T Consensus 3 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~ 34 (39)
T 1njq_A 3 PPRSYTCSFCKREFRSAQALGGHMNVHRRDRA 34 (39)
T ss_dssp CSSSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred CCCceECCCCCcccCCHHHHHHHHHHcCCCcc
Confidence 35899999999999999999999999998764
No 35
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=97.06 E-value=2.2e-06 Score=61.44 Aligned_cols=29 Identities=34% Similarity=0.789 Sum_probs=27.3
Q ss_pred CccccCccccccCccccchhHHhhcchhh
Q 048174 1114 KNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1114 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
+||+|++||+.|.+..+|..|+++|++++
T Consensus 2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~k 30 (30)
T 2lvr_A 2 KPYVCIHCQRQFADPGALQRHVRIHTGEK 30 (30)
Confidence 78999999999999999999999999864
No 36
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.84 E-value=3.5e-06 Score=63.36 Aligned_cols=31 Identities=23% Similarity=0.443 Sum_probs=28.4
Q ss_pred CCCccccCccccccCccccchhHHhhcchhh
Q 048174 1112 PPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1112 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
..+||+|++|++.|.....|..||++|++++
T Consensus 6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2elt_A 6 SGKPYKCPQCSYASAIKANLNVHLRKHTGEK 36 (36)
T ss_dssp CCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred CCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence 4589999999999999999999999999864
No 37
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.84 E-value=4.4e-06 Score=63.01 Aligned_cols=31 Identities=35% Similarity=0.683 Sum_probs=28.6
Q ss_pred CCCccccCccccccCccccchhHHhhcchhh
Q 048174 1112 PPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1112 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
..+||+|++|++.|.+...|..|+++|++++
T Consensus 6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2elq_A 6 SGKPFKCSLCEYATRSKSNLKAHMNRHSTEK 36 (36)
T ss_dssp CCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred CCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence 4589999999999999999999999999864
No 38
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=97.83 E-value=5.2e-06 Score=62.94 Aligned_cols=29 Identities=28% Similarity=0.452 Sum_probs=27.1
Q ss_pred CCccccCccccccCccccchhHHhhcchh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRD 1141 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~ 1141 (1303)
.+||+|++|++.|.....|..|+++|+++
T Consensus 9 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~ 37 (37)
T 1p7a_A 9 IKPFQCPDCDRSFSRSDHLALHRKRHMLV 37 (37)
T ss_dssp SSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred CCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence 38999999999999999999999999874
No 39
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=97.83 E-value=3.1e-06 Score=60.16 Aligned_cols=29 Identities=24% Similarity=0.686 Sum_probs=26.9
Q ss_pred CccccCccccccCccccchhHHhhcchhh
Q 048174 1114 KNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1114 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
+||+|++|++.|.....|..|+++|++++
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k 29 (29)
T 1ard_A 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29 (29)
T ss_dssp CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence 58999999999999999999999999763
No 40
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=97.83 E-value=1.5e-06 Score=64.07 Aligned_cols=29 Identities=21% Similarity=0.421 Sum_probs=27.3
Q ss_pred CccccCccccccCccccchhHHhhcchhh
Q 048174 1114 KNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1114 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
|||+|++|||.|.....|..||++|++++
T Consensus 1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~k 29 (32)
T 2kfq_A 1 YAFACPACPKRFMRSDALSKHIKTAFIVV 29 (32)
T ss_dssp CCSSSSSSCTTHHHHHTTSSSTTSSSSSS
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHccCC
Confidence 68999999999999999999999999874
No 41
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.82 E-value=4.6e-06 Score=62.89 Aligned_cols=31 Identities=29% Similarity=0.578 Sum_probs=28.5
Q ss_pred CCCccccCccccccCccccchhHHhhcchhh
Q 048174 1112 PPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1112 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
..+||+|++|++.|.....|..||++|++++
T Consensus 6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2elv_A 6 SGLLYDCHICERKFKNELDRDRHMLVHGDKW 36 (36)
T ss_dssp CCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred CCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence 3589999999999999999999999999864
No 42
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=97.79 E-value=2.4e-06 Score=85.68 Aligned_cols=51 Identities=22% Similarity=0.384 Sum_probs=35.1
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcchhh
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.++++.+|.|+.|+ |...++++ |||+|++|++.|.+...|..||++|++++
T Consensus 16 ~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~----------k~~~C~~C~k~F~~~~~L~~H~~~H~~~k 77 (133)
T 2lt7_A 16 IVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWE----------KKYPCRYCEKVFPLAEYRTKHEIHHTGER 77 (133)
T ss_dssp EETTEEEEEETTTCCEESCHHHHHHHHHHHHCC----------SCEECSSSSCEESSHHHHHHHHHHHHTCC
T ss_pred ecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCC----------CCeeCCccCeecccccchhhhccccCCCc
Confidence 34567778888885 33344443 67777777777777777777777777653
No 43
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=97.77 E-value=2.8e-06 Score=71.04 Aligned_cols=45 Identities=27% Similarity=0.609 Sum_probs=33.8
Q ss_pred ccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcch
Q 048174 1086 KEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRR 1140 (1303)
Q Consensus 1086 ~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~ 1140 (1303)
+++|+|..|+ |...+.+ .+||+|++|++.|.+..+|..|+++|.+
T Consensus 2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~----------~~~~~C~~C~~~f~~~~~l~~H~~~hh~ 57 (57)
T 3uk3_C 2 SSSRECSYCGKFFRSNYYLNIHLRTHTG----------EKPYKCEFCEYAAAQKTSLRYHLERHHK 57 (57)
T ss_dssp ---CBCTTTCCBCSCHHHHHHHHHHHHC----------CCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred CCCccCCCCcchhCChHHHHHHHHHcCC----------CCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence 4689999996 2233333 3889999999999999999999999863
No 44
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=97.77 E-value=4.1e-06 Score=72.02 Aligned_cols=30 Identities=30% Similarity=0.689 Sum_probs=28.6
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
+|||+|.+|||.|.....|..||++|++++
T Consensus 2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ek 31 (60)
T 4gzn_C 2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYR 31 (60)
T ss_dssp CCCEECTTTCCEESSHHHHHHHHHHHHTCC
T ss_pred CCCccCCCCCCEeCCHHHHHHHHHHhCCCc
Confidence 599999999999999999999999999875
No 45
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.76 E-value=4.6e-06 Score=74.74 Aligned_cols=52 Identities=17% Similarity=0.431 Sum_probs=40.1
Q ss_pred cccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHH-hhcchh
Q 048174 1083 EWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHM-NVHRRD 1141 (1303)
Q Consensus 1083 ~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~-~~h~~~ 1141 (1303)
+.++++|+|+.|+ |...+.+. ...++|.|++|++.|.+...|..|| +.|.++
T Consensus 2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~-------~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~ 65 (78)
T 2d9h_A 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAET-------VAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65 (78)
T ss_dssp CCSCCCEECSSSCCEESSHHHHHHHHHHHHHH-------TTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred CCCCcCeECCCCCCeeCCHHHHHHHHHHhhcc-------CCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence 4678899999996 33333331 1248999999999999999999999 677764
No 46
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.76 E-value=5.3e-06 Score=79.29 Aligned_cols=53 Identities=21% Similarity=0.410 Sum_probs=41.8
Q ss_pred cccccceecCCCc-----------cCC-ccCCCCCCCCcCCCCCccccCccccccCccccchhH-Hhhcchhh
Q 048174 1083 EWVKEKWECEKCS-----------CSE-AQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGH-MNVHRRDR 1142 (1303)
Q Consensus 1083 ~~~~~~~~c~~c~-----------~~~-~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h-~~~h~~~~ 1142 (1303)
..++++|+|+.|+ |.. .++|. ...+||+|.+|||.|.+...|..| +++|++|+
T Consensus 13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~-------~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgek 78 (102)
T 2ghf_A 13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNV-------VLNSSYVCVECNFLTKRYDALSEHNLKYHPGEE 78 (102)
T ss_dssp CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSC-------CCSCCEEETTTTEEESSTHHHHTHHHHTSTTCC
T ss_pred CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCC-------CCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCC
Confidence 3577899999996 322 23221 134899999999999999999999 89999875
No 47
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.75 E-value=6.7e-06 Score=64.35 Aligned_cols=30 Identities=33% Similarity=0.728 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..||++|++++
T Consensus 9 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 38 (42)
T 2eos_A 9 EKPYPCEICGTRFRHLQTLKSHLRIHTGSG 38 (42)
T ss_dssp SCCBCCSSSCCCBSSHHHHHHHTTTTSCCS
T ss_pred CCCEECCCCCCccCCHHHHHHHHHhcCCCC
Confidence 389999999999999999999999999864
No 48
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=97.75 E-value=5.4e-06 Score=61.98 Aligned_cols=30 Identities=20% Similarity=0.525 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..||++|++++
T Consensus 5 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~ 34 (35)
T 1srk_A 5 KRPFVCRICLSAFTTKANCARHLKVHTDTL 34 (35)
T ss_dssp CSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred CcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999764
No 49
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.75 E-value=2e-05 Score=69.02 Aligned_cols=33 Identities=21% Similarity=0.347 Sum_probs=29.8
Q ss_pred CCCCccccCccccccCccccchhHHhhcchhhh
Q 048174 1111 WPPKNYNCSFCRREFRSAQALGGHMNVHRRDRA 1143 (1303)
Q Consensus 1111 ~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~ 1143 (1303)
...|||+|.+|+|.|.....|..||++|++++.
T Consensus 9 ~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~ 41 (66)
T 2epp_A 9 REAGILPCGLCGKVFTDANRLRQHEAQHGVTSL 41 (66)
T ss_dssp CCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred CCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence 356999999999999999999999999998644
No 50
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.75 E-value=6.1e-06 Score=61.53 Aligned_cols=30 Identities=23% Similarity=0.524 Sum_probs=28.1
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.++|+|++|++.|.....|..|+++|++++
T Consensus 5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k 34 (35)
T 2elx_A 5 SSGYVCALCLKKFVSSIRLRSHIREVHGAA 34 (35)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred CCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence 489999999999999999999999999864
No 51
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=97.74 E-value=5.2e-06 Score=71.75 Aligned_cols=49 Identities=22% Similarity=0.548 Sum_probs=38.9
Q ss_pred cccccceecCCCc-----------cCCc-cCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcch
Q 048174 1083 EWVKEKWECEKCS-----------CSEA-QHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRR 1140 (1303)
Q Consensus 1083 ~~~~~~~~c~~c~-----------~~~~-~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~ 1140 (1303)
+.++++|.|+.|+ |... +. ...+||+|++|++.|.+..+|..|+++|.+
T Consensus 5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~---------~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHK---------RNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp EEETTEEECTTTCCEESSHHHHHHHHHHHSS---------SSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred cCCCcceECCCCcchhCCHHHHHHHHHHHcC---------CCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence 4567899999996 2222 21 134899999999999999999999999874
No 52
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=97.73 E-value=5.7e-06 Score=70.01 Aligned_cols=45 Identities=27% Similarity=0.650 Sum_probs=36.4
Q ss_pred cceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHH-hhcchh
Q 048174 1087 EKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHM-NVHRRD 1141 (1303)
Q Consensus 1087 ~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~-~~h~~~ 1141 (1303)
++|+|..|+ |...+.+ .+||.|++|++.|.+...|..|+ ++|+++
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~~h~~----------~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~ 57 (60)
T 2adr_A 1 RSFVCEVCTRAFARQEHLKRHYRSHTN----------EKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57 (60)
T ss_dssp CCBCCTTTCCCBSCHHHHHHHHHTTTS----------SCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred CcCcCCCCccccCCHHHHHHHHHHhCC----------CCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence 379999996 3333333 38999999999999999999996 899875
No 53
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=97.71 E-value=6.3e-06 Score=59.89 Aligned_cols=29 Identities=21% Similarity=0.714 Sum_probs=27.0
Q ss_pred CccccC--ccccccCccccchhHHhhcchhh
Q 048174 1114 KNYNCS--FCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1114 ~~~~c~--~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
|||+|+ .||+.|.+...|..|+++|++++
T Consensus 1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k 31 (31)
T 1sp2_A 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31 (31)
T ss_dssp CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence 689998 99999999999999999999864
No 54
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.71 E-value=7e-06 Score=57.59 Aligned_cols=27 Identities=30% Similarity=0.659 Sum_probs=25.4
Q ss_pred CCccccCccccccCccccchhHHhhcc
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHR 1139 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~ 1139 (1303)
.|||+|+.||+.|.+...|..|+++|+
T Consensus 1 ek~~~C~~C~k~f~~~~~l~~H~~~H~ 27 (27)
T 2kvh_A 1 EKPFSCSLCPQRSRDFSAMTKHLRTHG 27 (27)
T ss_dssp CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence 378999999999999999999999995
No 55
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.71 E-value=8.5e-06 Score=61.78 Aligned_cols=31 Identities=19% Similarity=0.445 Sum_probs=28.2
Q ss_pred CCCccccCccccccCcc-ccchhHHhhcchhh
Q 048174 1112 PPKNYNCSFCRREFRSA-QALGGHMNVHRRDR 1142 (1303)
Q Consensus 1112 ~~~~~~c~~c~~~f~~~-~~l~~h~~~h~~~~ 1142 (1303)
..+||+|++|++.|.+. ..|..|+++|++++
T Consensus 6 ~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k 37 (37)
T 2elp_A 6 SGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK 37 (37)
T ss_dssp CCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred CCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence 35899999999999999 99999999999863
No 56
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.70 E-value=6.5e-06 Score=62.39 Aligned_cols=30 Identities=17% Similarity=0.639 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.....|..|+++|++++
T Consensus 7 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k 36 (37)
T 2elo_A 7 GRSYSCPVCEKSFSEDRLIKSHIKTNHPEV 36 (37)
T ss_dssp CCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred CCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence 489999999999999999999999999864
No 57
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.69 E-value=1e-05 Score=64.17 Aligned_cols=30 Identities=27% Similarity=0.378 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.....|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k 39 (44)
T 2epv_A 10 EKPYECNECGKAFIWKSLLIVHERTHAGVS 39 (44)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHGGGSSCS
T ss_pred CcCeECCCCCcccCchHHHHHHHhHhcCCC
Confidence 489999999999999999999999999864
No 58
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.69 E-value=7.4e-06 Score=64.03 Aligned_cols=30 Identities=27% Similarity=0.556 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..|+++|++++
T Consensus 9 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 38 (42)
T 2en2_A 9 EKPYKCETCGARFVQVAHLRAHVLIHTGSG 38 (42)
T ss_dssp SCSEECTTTCCEESSHHHHHHHTHHHHSCC
T ss_pred CCCEeCCCcChhhCCHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999864
No 59
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=97.69 E-value=9.6e-06 Score=63.28 Aligned_cols=30 Identities=20% Similarity=0.420 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.....|..||++|++++
T Consensus 9 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k 38 (42)
T 2epc_A 9 ETPYLCGQCGKSFTQRGSLAVHQRSCSQSG 38 (42)
T ss_dssp SCCEECSSSCCEESSHHHHHHHHHHTTCCC
T ss_pred CCCeECCCCCcccCCHHHHHHHhhhcCCCC
Confidence 389999999999999999999999999864
No 60
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=97.68 E-value=8e-06 Score=57.04 Aligned_cols=27 Identities=37% Similarity=0.839 Sum_probs=24.3
Q ss_pred ccccCccccccCccccchhHHhhcchh
Q 048174 1115 NYNCSFCRREFRSAQALGGHMNVHRRD 1141 (1303)
Q Consensus 1115 ~~~c~~c~~~f~~~~~l~~h~~~h~~~ 1141 (1303)
||+|++|||.|.+...|..||++|+++
T Consensus 1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~ 27 (27)
T 1znf_A 1 XYKCGLCERSFVEKSALSRHQRVHKNX 27 (27)
T ss_dssp -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence 699999999999999999999999864
No 61
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.68 E-value=7.1e-06 Score=57.78 Aligned_cols=27 Identities=30% Similarity=0.635 Sum_probs=25.3
Q ss_pred CCccccCccccccCccccchhHHhhcc
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHR 1139 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~ 1139 (1303)
.|||+|++||+.|.....|..||++|+
T Consensus 1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~ 27 (27)
T 2kvg_A 1 AAPYRCPLCRAGCPSLASMQAHMRGHS 27 (27)
T ss_dssp CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence 378999999999999999999999995
No 62
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.68 E-value=1e-05 Score=59.17 Aligned_cols=29 Identities=24% Similarity=0.544 Sum_probs=27.2
Q ss_pred CccccC--ccccccCccccchhHHhhcchhh
Q 048174 1114 KNYNCS--FCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1114 ~~~~c~--~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
|||+|+ .||+.|.+...|..|+++|++++
T Consensus 2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~ 32 (32)
T 1zfd_A 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA 32 (32)
T ss_dssp CSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred CCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence 789999 89999999999999999999864
No 63
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.68 E-value=1.3e-05 Score=64.07 Aligned_cols=30 Identities=33% Similarity=0.767 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|.+|++.|.....|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k 39 (46)
T 2enh_A 10 EKPYECDVCRKAFSHHASLTQHQRVHSGEK 39 (46)
T ss_dssp SSSCBCTTTCCBCSSSHHHHHHGGGSCCSC
T ss_pred CCCcCCCCcCchhCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999864
No 64
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.67 E-value=8.4e-06 Score=58.39 Aligned_cols=29 Identities=31% Similarity=0.675 Sum_probs=26.8
Q ss_pred CccccCccccccCccccchhH-Hhhcchhh
Q 048174 1114 KNYNCSFCRREFRSAQALGGH-MNVHRRDR 1142 (1303)
Q Consensus 1114 ~~~~c~~c~~~f~~~~~l~~h-~~~h~~~~ 1142 (1303)
|||+|+.||+.|.+...|..| +++|++|+
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~ 30 (30)
T 1paa_A 1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL 30 (30)
T ss_dssp CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence 589999999999999999999 79999864
No 65
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.67 E-value=8.4e-06 Score=57.55 Aligned_cols=27 Identities=30% Similarity=0.721 Sum_probs=25.6
Q ss_pred CccccCccccccCccccchhHHhhcch
Q 048174 1114 KNYNCSFCRREFRSAQALGGHMNVHRR 1140 (1303)
Q Consensus 1114 ~~~~c~~c~~~f~~~~~l~~h~~~h~~ 1140 (1303)
+||+|++|++.|.+...|..|+++|++
T Consensus 2 k~~~C~~C~k~f~~~~~l~~H~~~h~~ 28 (28)
T 2kvf_A 2 RPYSCSVCGKRFSLKHQMETHYRVHTG 28 (28)
T ss_dssp CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence 789999999999999999999999974
No 66
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.67 E-value=1.1e-05 Score=64.35 Aligned_cols=30 Identities=30% Similarity=0.719 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.++|+|++|+|.|.....|..|+++|++++
T Consensus 10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k 39 (46)
T 2emi_A 10 ERHYECSECGKAFIQKSTLSMHQRIHRGEK 39 (46)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHGGGCSCC
T ss_pred CCCCCCCCCCcccCCHHHHHHHHhHhCCCC
Confidence 389999999999999999999999999864
No 67
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=97.66 E-value=1.2e-05 Score=62.85 Aligned_cols=30 Identities=27% Similarity=0.563 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.++|+|++|++.|.+...|..||++|++++
T Consensus 8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 37 (42)
T 2el5_A 8 ENPYECSECGKAFNRKDQLISHQRTHAGES 37 (42)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHGGGCCCC
T ss_pred CCCccCCCcChhhCCHHHHHHHHHhcCCCC
Confidence 489999999999999999999999999863
No 68
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=96.83 E-value=6.4e-06 Score=57.24 Aligned_cols=26 Identities=31% Similarity=0.689 Sum_probs=24.7
Q ss_pred CccccCccccccCccccchhHHhhcc
Q 048174 1114 KNYNCSFCRREFRSAQALGGHMNVHR 1139 (1303)
Q Consensus 1114 ~~~~c~~c~~~f~~~~~l~~h~~~h~ 1139 (1303)
|||+|++||+.|.....|..||++|+
T Consensus 1 kp~~C~~C~k~f~~~~~l~~H~~~H~ 26 (26)
T 2lvu_A 1 KPYVCERCGKRFVQSSQLANHIRHHD 26 (26)
Confidence 68999999999999999999999995
No 69
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=97.66 E-value=6.9e-06 Score=75.30 Aligned_cols=50 Identities=22% Similarity=0.585 Sum_probs=39.0
Q ss_pred cccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcchhh
Q 048174 1083 EWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1083 ~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
+..+.+|.|..|+ |...+.+ .++|+|++|++.|.+...|..|+++|++++
T Consensus 29 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~----------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k 89 (90)
T 1a1h_A 29 HTGQKPFQCRICMRNFSRSDHLTTHIRTHTG----------EKPFACDICGRKFARSDERKRHTKIHLRQK 89 (90)
T ss_dssp HHCCCCEECTTTCCEESCHHHHHHHHHHHHC----------CCCEECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred hCCCCCccCCCCCcccCCHHHHHHHHHHcCC----------CCCccCCCCCchhCCHHHHHHHHHHhcccC
Confidence 3456789999996 2233333 378999999999999999999999999874
No 70
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=97.66 E-value=1.5e-05 Score=63.68 Aligned_cols=30 Identities=27% Similarity=0.599 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|+|.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2ely_A 10 EKPFKCVECGKGFSRRSALNVHHKLHTGEK 39 (46)
T ss_dssp CCSBCCSSSCCCBSSTTHHHHHHHHHSCCS
T ss_pred CCCcccCccCcccCCHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999764
No 71
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.65 E-value=1.1e-05 Score=62.90 Aligned_cols=30 Identities=30% Similarity=0.577 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++||+.|.+...|..|+++|++++
T Consensus 9 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 38 (42)
T 2ytb_A 9 EKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38 (42)
T ss_dssp CCSBCCTTTTCCBSSHHHHHTTGGGTSCCS
T ss_pred CCCeeCCCccchhCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999864
No 72
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.65 E-value=1.1e-05 Score=64.49 Aligned_cols=30 Identities=23% Similarity=0.586 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|+|.|.....|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2em4_A 10 QRPYECIECGKAFKTKSSLICHRRSHTGEK 39 (46)
T ss_dssp SSSEECSSSCCEESSHHHHHHHHHHHSSSS
T ss_pred CcCcCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence 389999999999999999999999999864
No 73
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.64 E-value=1.3e-05 Score=64.06 Aligned_cols=30 Identities=37% Similarity=0.700 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.....|..||++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2eoh_A 10 KKPYECKECRKTFIQIGHLNQHKRVHTGER 39 (46)
T ss_dssp SCSCCCSSSCCCCSSHHHHHHHHHHCSSCC
T ss_pred CCCcCCCCcCchhCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999864
No 74
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.64 E-value=1.4e-05 Score=62.34 Aligned_cols=30 Identities=27% Similarity=0.578 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..|+++|++++
T Consensus 8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 37 (42)
T 2yte_A 8 EKPYSCAECKETFSDNNRLVQHQKMHTVKS 37 (42)
T ss_dssp CCSCBCTTTCCBCSSHHHHHHHHHHTSCCS
T ss_pred CCCeECCCCCCccCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999764
No 75
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.64 E-value=1.3e-05 Score=64.15 Aligned_cols=30 Identities=37% Similarity=0.750 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|+|.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2eon_A 10 EKPYKCQVCGKAFRVSSHLVQHHSVHSGER 39 (46)
T ss_dssp CCSCBCSSSCCBCSSHHHHHHHTTTTTSCC
T ss_pred CcccCCCCCCcccCcHHHHHHHHHhcCCCC
Confidence 489999999999999999999999999764
No 76
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.64 E-value=1.4e-05 Score=63.77 Aligned_cols=30 Identities=23% Similarity=0.599 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|+|.|.....|..||++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2epz_A 10 EKPFDCIDCGKAFSDHIGLNQHRRIHTGEK 39 (46)
T ss_dssp CCSBCCTTTCCCBSSHHHHHHHHTTTTTCC
T ss_pred CCCeECCCCCceeCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999864
No 77
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.64 E-value=1.4e-05 Score=63.90 Aligned_cols=30 Identities=27% Similarity=0.499 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.++|+|++|++.|.+...|..||++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2emg_A 10 ENPFICSECGKVFTHKTNLIIHQKIHTGER 39 (46)
T ss_dssp CCSCBCTTTCCBCSSHHHHHHHHTTTSCCC
T ss_pred CCCEECCccCcccCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999864
No 78
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=97.63 E-value=1.1e-05 Score=57.57 Aligned_cols=29 Identities=21% Similarity=0.566 Sum_probs=26.8
Q ss_pred CccccCccccccCccccchhHHhhcchhh
Q 048174 1114 KNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1114 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
+||+|++||+.|.....|..|+++|.+++
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~ 29 (30)
T 1klr_A 1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE 29 (30)
T ss_dssp CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence 58999999999999999999999998753
No 79
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.62 E-value=1.6e-05 Score=63.49 Aligned_cols=30 Identities=27% Similarity=0.600 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.....|..||++|++++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k 39 (46)
T 2enf_A 10 EKPYKCNECGKVFTQNSHLVRHRGIHTGEK 39 (46)
T ss_dssp CCSCBCSSSCCBCSSHHHHHHHHTTTTTSS
T ss_pred CcCeECCCCCcccCCHHHHHHHHHhhCCCC
Confidence 489999999999999999999999999864
No 80
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=97.62 E-value=1.1e-05 Score=61.39 Aligned_cols=31 Identities=23% Similarity=0.514 Sum_probs=28.2
Q ss_pred CCCccccCc--cccccCccccchhHHhhcchhh
Q 048174 1112 PPKNYNCSF--CRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1112 ~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
..+||.|.+ |||.|...+.|..|+++|++|+
T Consensus 5 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek 37 (37)
T 1va1_A 5 KKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37 (37)
T ss_dssp SCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence 458999996 9999999999999999999874
No 81
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.61 E-value=1.4e-05 Score=62.97 Aligned_cols=30 Identities=33% Similarity=0.520 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..||++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (44)
T 2en7_A 10 MKPYVCNECGKAFRSKSYLIIHTRTHTGES 39 (44)
T ss_dssp SSSSCCTTTCCCCSSHHHHHHHHTTTCCSS
T ss_pred CcCeECCCCCCccCCHHHHHHHhhhcCCCC
Confidence 489999999999999999999999999864
No 82
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.61 E-value=1.8e-05 Score=63.31 Aligned_cols=30 Identities=27% Similarity=0.564 Sum_probs=27.8
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~ 39 (46)
T 2elz_A 10 EKPYKCEDCGKGYNRRLNLDMHQRVHMGEK 39 (46)
T ss_dssp CSSCBCSSSCCBCSSHHHHHHHGGGGGSCC
T ss_pred CCCeeCcccCchhCCHHHHHHHHHhcCCCC
Confidence 489999999999999999999999999763
No 83
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.61 E-value=1.4e-05 Score=63.10 Aligned_cols=30 Identities=23% Similarity=0.516 Sum_probs=27.8
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.....|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (44)
T 2eoj_A 10 ENPYECCECGKVFSRKDQLVSHQKTHSGQS 39 (44)
T ss_dssp CCSCEETTTTEECSSHHHHHHHHTTSSSSC
T ss_pred CcCeeCCCCCCccCCHHHHHHHHHHcCCCC
Confidence 389999999999999999999999999763
No 84
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.60 E-value=1.6e-05 Score=63.45 Aligned_cols=30 Identities=27% Similarity=0.593 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..||++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2ytf_A 10 EKPFECSECQKAFNTKSNLIVHQRTHTGEK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHTSCSSS
T ss_pred CCCcCCCCCCcccCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999864
No 85
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.60 E-value=1.8e-05 Score=63.28 Aligned_cols=30 Identities=37% Similarity=0.616 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.....|..||++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2ytq_A 10 EKPYGCSECGKAFSSKSYLIIHMRTHSGEK 39 (46)
T ss_dssp CCSCBCSSSCCBCSCHHHHHHHHTTTCCSC
T ss_pred CCCcCCCccChhhCChHHHHHHHHHhCCCC
Confidence 489999999999999999999999999864
No 86
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.60 E-value=1.5e-05 Score=63.79 Aligned_cols=30 Identities=27% Similarity=0.626 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|+|.|.....|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k 39 (46)
T 2ytp_A 10 ERHYECSECGKAFARKSTLIMHQRIHTGEK 39 (46)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHTTTSCCC
T ss_pred CCCeECCcCCcccCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999863
No 87
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.60 E-value=1.7e-05 Score=63.36 Aligned_cols=30 Identities=30% Similarity=0.566 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.++|+|++|+|.|.+...|..||++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2em7_A 10 EKPYKCEECGKGFICRRDLYTHHMVHTGEK 39 (46)
T ss_dssp CCSEECSSSCCEESCHHHHHHHGGGGTTCC
T ss_pred CcCccCCCccchhCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999864
No 88
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.60 E-value=1.6e-05 Score=62.64 Aligned_cols=30 Identities=27% Similarity=0.587 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..||++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (44)
T 2eof_A 10 EKPYECNECQKAFNTKSNLMVHQRTHTGES 39 (44)
T ss_dssp CCSEECTTTCCEESCHHHHHHHHHHTTTSS
T ss_pred CCCeECCCCCcccCCHhHHHHHHHHhCCCC
Confidence 489999999999999999999999999864
No 89
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.59 E-value=1.6e-05 Score=62.92 Aligned_cols=30 Identities=23% Similarity=0.456 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.++|+|++|++.|.....|..||++|++++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (44)
T 2eou_A 10 KTTSECQECGKIFRHSSLLIEHQALHAGES 39 (44)
T ss_dssp SCCCCCTTTCCCCSSHHHHHHHHHHHTTSC
T ss_pred CcCeECCCCCcccCCHHHHHHHHHHHCCCC
Confidence 489999999999999999999999999864
No 90
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.59 E-value=1.4e-05 Score=63.55 Aligned_cols=31 Identities=26% Similarity=0.668 Sum_probs=28.5
Q ss_pred CCCccccCccccccCccccchhHHhhcchhh
Q 048174 1112 PPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1112 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
..++|+|++|+|.|.....|..||++|++++
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k 39 (45)
T 2epu_A 9 GQKPFECTHCGKSFRAKGNLVTHQRIHTGEK 39 (45)
T ss_dssp SCCSEEETTTTEEESSHHHHHHHHTTTSSCC
T ss_pred CCcCccCCCCCCccCChHHHHHHHHHhCCCC
Confidence 3589999999999999999999999999864
No 91
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.59 E-value=1.7e-05 Score=63.43 Aligned_cols=30 Identities=23% Similarity=0.646 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|+|.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k 39 (46)
T 2emf_A 10 GKHFECTECGKAFTRKSTLSMHQKIHTGEK 39 (46)
T ss_dssp SCCEECSSSCCEESCHHHHHHHGGGTSCSS
T ss_pred CCCeECCCCCchhCCHHHHHHHHHHhCCCC
Confidence 389999999999999999999999999864
No 92
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=97.59 E-value=1.5e-05 Score=63.66 Aligned_cols=30 Identities=23% Similarity=0.645 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k 39 (46)
T 2emj_A 10 EKPFECAECGKSFSISSQLATHQRIHTGEK 39 (46)
T ss_dssp CCSEECSSSSCEESSHHHHHHHHHHHTTSC
T ss_pred CCCEECCCCCcccCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999764
No 93
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.59 E-value=1.7e-05 Score=63.34 Aligned_cols=30 Identities=27% Similarity=0.643 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..||++|++++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k 39 (46)
T 2yti_A 10 EKPYKCNECGKVFTQNSHLARHRGIHTGEK 39 (46)
T ss_dssp CCTTCCSSSCCCCSSHHHHHHHHTTTSCSC
T ss_pred CcCeECCCCCcccCChhHHHHHhHhcCCCC
Confidence 489999999999999999999999999864
No 94
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.58 E-value=1.3e-05 Score=70.30 Aligned_cols=55 Identities=16% Similarity=0.276 Sum_probs=42.2
Q ss_pred ccccccceecCCCccCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcchhh
Q 048174 1082 MEWVKEKWECEKCSCSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+.++.+|.|..|+..-..... .. ..++|+|++||+.|.+...|..||++|++++
T Consensus 12 ~h~~~~~~~C~~C~k~f~~~~~--l~----~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~ 66 (73)
T 2ctu_A 12 IHLGDRSQKCSKCGIIFIRRST--LS----RRKTPMCEKCRKDSCQEAALNKDEGNESGKK 66 (73)
T ss_dssp CCCCCSEEECSSSCCEEECCCC--CC----CSSSCCCHHHHHTCSCCCSSCCCSSCCCCCC
T ss_pred HhCCCCCeeCCcccchhCCHHH--hC----cCCCCCCCCCChhhcCHHHHHHHHHhhcCCC
Confidence 4567889999999743322111 11 1689999999999999999999999999763
No 95
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.58 E-value=2e-05 Score=62.96 Aligned_cols=30 Identities=27% Similarity=0.637 Sum_probs=27.8
Q ss_pred CCccccCccccccCccccchhHHhhcch-hh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRR-DR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~-~~ 1142 (1303)
.+||+|++|++.|.....|..||++|++ ++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~ 40 (46)
T 2eoy_A 10 EKCFKCNKCEKTFSCSKYLTQHERIHTRGVK 40 (46)
T ss_dssp SCCEECSSSCCEESSSHHHHHHHTTCCSCCT
T ss_pred CCCEECcCCCCcCCCHHHHHHHHHHcCCCCC
Confidence 4899999999999999999999999997 54
No 96
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.58 E-value=1.9e-05 Score=63.03 Aligned_cols=30 Identities=27% Similarity=0.641 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..||++|++++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k 39 (46)
T 2ytn_A 10 KKPYKCNECGKVFTQNSHLARHRGIHTGEK 39 (46)
T ss_dssp CSSCBCTTTCCBCSSHHHHHHHGGGTSCCC
T ss_pred CcCeECCCCCCeeCCHHHHHHHhhhcCCCC
Confidence 489999999999999999999999999864
No 97
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.58 E-value=1.8e-05 Score=63.17 Aligned_cols=30 Identities=30% Similarity=0.675 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||.|++|++.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2eq2_A 10 GKPYQCNECGKAFSQTSKLARHQRVHTGEK 39 (46)
T ss_dssp SCSSSCCSSCCCCSSHHHHHHHGGGGCCCC
T ss_pred CCCeECCCCCcccCCHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999864
No 98
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.57 E-value=1.6e-05 Score=63.55 Aligned_cols=30 Identities=27% Similarity=0.569 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..||++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2ytm_A 10 EKPYKCMECGKAFGDNSSCTQHQRLHTGQR 39 (46)
T ss_dssp CCSSSBTTTTBCCSSHHHHHHHHHHHHSCC
T ss_pred CCCcCCCCCCchhCCHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999764
No 99
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.57 E-value=1.9e-05 Score=63.06 Aligned_cols=30 Identities=33% Similarity=0.741 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2em6_A 10 EKCYKCDVCGKEFSQSSHLQTHQRVHTGEK 39 (46)
T ss_dssp CCCCBCSSSCCBCSSHHHHHHHHTTTSSSC
T ss_pred CCCeECCCCCcccCCHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999864
No 100
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.57 E-value=2e-05 Score=62.24 Aligned_cols=30 Identities=30% Similarity=0.545 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.....|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (44)
T 2yu5_A 10 ENPFKCSKCDRVFTQRNYLVQHERTHARKS 39 (44)
T ss_dssp CCSEECSSSSCEESSSHHHHHHHHHCCCCC
T ss_pred CCCeECCCCCchhCCHHHHHHHhHhcCCCC
Confidence 489999999999999999999999999763
No 101
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.57 E-value=1.6e-05 Score=62.84 Aligned_cols=30 Identities=30% Similarity=0.607 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++||+.|.+...|..|+++|++++
T Consensus 8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 37 (44)
T 2emx_A 8 EKPFGCSCCEKAFSSKSYLLVHQQTHAEEK 37 (44)
T ss_dssp CCCEECSSSSCEESSHHHHHHHHHHHTSSC
T ss_pred CcCccCCCCCcccCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999864
No 102
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.57 E-value=1.8e-05 Score=63.16 Aligned_cols=30 Identities=33% Similarity=0.720 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+..+|..||++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2eml_A 10 EKPYECSVCGKAFSHRQSLSVHQRIHSGKK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHGGGSSCC
T ss_pred CCCeeCCCcCCccCCHHHHHHHHHHhcCCC
Confidence 489999999999999999999999999864
No 103
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.57 E-value=1.9e-05 Score=63.04 Aligned_cols=30 Identities=20% Similarity=0.486 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|+|.|.....|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2enc_A 10 EKPFKCEECGKGFYTNSQCYSHQRSHSGEK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHSCCSS
T ss_pred CCCcCCCCCCCcCCChHHHHHHHHHhCCCC
Confidence 489999999999999999999999999864
No 104
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.57 E-value=1.9e-05 Score=63.09 Aligned_cols=30 Identities=27% Similarity=0.784 Sum_probs=28.1
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.....|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2emz_A 10 ERPFKCNECGKGFGRRSHLAGHLRLHSREK 39 (46)
T ss_dssp CCSCCCSSSCCCCSSHHHHHHHHHHHHHTT
T ss_pred CCCeECCCCCcccCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999874
No 105
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.57 E-value=1.8e-05 Score=62.48 Aligned_cols=30 Identities=30% Similarity=0.542 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.....|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (44)
T 2emb_A 10 RKRYECSKCQATFNLRKHLIQHQKTHAAKS 39 (44)
T ss_dssp CSSEECTTTCCEESCHHHHHHHGGGGCCCC
T ss_pred CCCeECCCCCCccCCHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999864
No 106
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.57 E-value=1.6e-05 Score=63.36 Aligned_cols=30 Identities=30% Similarity=0.672 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||.|++|++.|.....|..||++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2eow_A 10 EKPYKCNECGKAFRARSSLAIHQATHSGEK 39 (46)
T ss_dssp CCCEECTTSCCEESSHHHHHHHHHHHCCCS
T ss_pred CCCeeccccCChhcCHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999864
No 107
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.57 E-value=2e-05 Score=62.77 Aligned_cols=30 Identities=27% Similarity=0.422 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|||.|.....|..||++|++++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k 39 (46)
T 2epw_A 10 EKPCKCTECGKAFCWKSQLIMHQRTHVDDK 39 (46)
T ss_dssp CCSEECSSSCCEESSSHHHHHHHHHCCSCC
T ss_pred CCCeeCCCCCCccCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999864
No 108
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.57 E-value=6.8e-06 Score=77.45 Aligned_cols=60 Identities=15% Similarity=0.284 Sum_probs=41.2
Q ss_pred cccccceecCCCccCCc-cCCCCCCC--CcCCC-CCccccCccccccCccccchhHHhhcchhhh
Q 048174 1083 EWVKEKWECEKCSCSEA-QHGQSSCG--LIVWP-PKNYNCSFCRREFRSAQALGGHMNVHRRDRA 1143 (1303)
Q Consensus 1083 ~~~~~~~~c~~c~~~~~-~~~~~~~~--~~~~~-~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~ 1143 (1303)
+..+++|.|..|+..-. .... ... ..-.. .++|+|.+|+|.|.+...|..||++|.+++.
T Consensus 19 h~~~~~~~C~~C~k~f~~~~~~-L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp 82 (98)
T 2gqj_A 19 IHERGEAVCPTCNVVTRKTLVG-LKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82 (98)
T ss_dssp TTTTSCCCCTTTCCCCSSCSHH-HHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred hccCCCcCCCCCCCChhhhHHH-HHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence 45678999999964332 1100 000 00011 4799999999999999999999999998643
No 109
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=97.56 E-value=1.9e-05 Score=62.99 Aligned_cols=30 Identities=30% Similarity=0.475 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2el4_A 10 VKPYGCSQCAKTFSLKSQLIVHQRSHTGVK 39 (46)
T ss_dssp CCSEECSSSSCEESSHHHHHHHGGGSSSCC
T ss_pred CCceECCCCCchhCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999864
No 110
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.56 E-value=1.9e-05 Score=63.09 Aligned_cols=30 Identities=23% Similarity=0.649 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.++|+|++|++.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k 39 (46)
T 2en9_A 10 KKLFKCNECKKTFTQSSSLTVHQRIHTGEK 39 (46)
T ss_dssp SCCCBCTTTCCBCSSHHHHHHHHHHHTSSC
T ss_pred CCCEECCccCcccCCHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999864
No 111
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.56 E-value=1.9e-05 Score=62.98 Aligned_cols=30 Identities=27% Similarity=0.598 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2yts_A 10 EKPYICNECGKSFIQKSHLNRHRRIHTGEK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHGGGTSSCC
T ss_pred CcCEECCCCChhhCChHHHHHHHHhcCCCC
Confidence 489999999999999999999999999764
No 112
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.56 E-value=1.8e-05 Score=63.27 Aligned_cols=30 Identities=27% Similarity=0.720 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.++|+|++|++.|.....|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2em2_A 10 EKPFKCKECGKAFRQNIHLASHLRIHTGEK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHHCCCC
T ss_pred CCCEECCcCCchhCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999864
No 113
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.56 E-value=1.9e-05 Score=62.98 Aligned_cols=30 Identities=27% Similarity=0.614 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2ep3_A 10 EKPYRCAECGKAFTDRSNLFTHQKIHTGEK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHTTTTTSC
T ss_pred CCCeECCCCCchhCCHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999764
No 114
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.55 E-value=2.1e-05 Score=62.63 Aligned_cols=30 Identities=33% Similarity=0.628 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..||++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2eq4_A 10 EKLYNCKECGKSFSRAPCLLKHERLHSGEK 39 (46)
T ss_dssp CCCCCBTTTTBCCSCHHHHHHHHHHCCSSS
T ss_pred CCCeECCCCCCccCchHHHHHHHHhcCCCC
Confidence 489999999999999999999999999863
No 115
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.55 E-value=1.9e-05 Score=63.00 Aligned_cols=30 Identities=30% Similarity=0.688 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.....|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2eq1_A 10 EKPYKCNECGKAFRAHSNLTTHQVIHTGEK 39 (46)
T ss_dssp SCCCCCTTTTCCCSSHHHHHHHHTTTCCSC
T ss_pred CCCeECCcCChhhCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999864
No 116
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.55 E-value=2.2e-05 Score=62.61 Aligned_cols=30 Identities=30% Similarity=0.588 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.++|+|++|++.|.....|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2ep1_A 10 EKPYECSDCGKSFIKKSQLHVHQRIHTGEN 39 (46)
T ss_dssp CCSSCCSSSCCCCSSHHHHHHHHGGGSSSC
T ss_pred CCCcCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999864
No 117
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=97.55 E-value=2.1e-05 Score=74.57 Aligned_cols=49 Identities=18% Similarity=0.459 Sum_probs=40.4
Q ss_pred cccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcchh
Q 048174 1083 EWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRD 1141 (1303)
Q Consensus 1083 ~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~ 1141 (1303)
+..+.+|.|..|+ |...+.+ .++|+|++|++.|.+...|..||++|+++
T Consensus 40 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~----------~~~~~C~~C~~~f~~~~~L~~H~~~H~~~ 99 (106)
T 2ee8_A 40 HTDERPYTCDICHKAFRRQDHLRDHRYIHSK----------EKPFKCQECGKGFCQSRTLAVHKTLHMQT 99 (106)
T ss_dssp HCCSCCCBCSSSCCBCSCHHHHHHHGGGSCC----------CCTTSCSSSCCCCSSHHHHHHHHHHTTSC
T ss_pred cCCCCCcCCCCccchhCCHHHHHHHHHHhCC----------CCCeECCCcCCcccCHHHHHHHHHHhCCC
Confidence 4567789999995 3343433 38899999999999999999999999975
No 118
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.55 E-value=1.8e-05 Score=63.22 Aligned_cols=30 Identities=27% Similarity=0.681 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..|+++|++++
T Consensus 10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~ 39 (46)
T 2em3_A 10 EKPYECKVCSKAFTQKAHLAQHQKTHTGEK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHHCCCC
T ss_pred CcCeECCCCCcccCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999763
No 119
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.55 E-value=2.2e-05 Score=62.67 Aligned_cols=30 Identities=27% Similarity=0.634 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||.|++|++.|.+...|..||++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2yth_A 10 EKPFQCEECGKRFTQNSHLHSHQRVHTGEK 39 (46)
T ss_dssp SSSBCCSSSCCCBSSHHHHHHHGGGGTTCC
T ss_pred CcCCCCCCCCcccCCHHHHHHHHHhcCCCC
Confidence 489999999999999999999999999864
No 120
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.55 E-value=1.8e-05 Score=63.24 Aligned_cols=30 Identities=33% Similarity=0.639 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2ysp_A 10 EKPYKCEKCGKGYNSKFNLDMHQKVHTGER 39 (46)
T ss_dssp CCSEEETTTTEEESCHHHHHHHHTTSCSCC
T ss_pred CCCeECCCCCCccCCHHHHHHHHHhhCCCC
Confidence 489999999999999999999999999764
No 121
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.55 E-value=2e-05 Score=62.85 Aligned_cols=30 Identities=30% Similarity=0.705 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||.|++|++.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2ep2_A 10 EKPYECSICGKSFTKKSQLHVHQQIHTGEK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHTTSSCC
T ss_pred CcCcCCCCCCcccCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999864
No 122
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.55 E-value=1.9e-05 Score=63.06 Aligned_cols=30 Identities=27% Similarity=0.619 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||.|++||+.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k 39 (46)
T 2eoo_A 10 ERPYGCNECGKNFGRHSHLIEHLKRHFREK 39 (46)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHHHHHSTT
T ss_pred CCCEEccccCcccCCHHHHHHHHHHHcCCC
Confidence 489999999999999999999999999864
No 123
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.55 E-value=2.2e-05 Score=62.53 Aligned_cols=30 Identities=23% Similarity=0.417 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+..+|..||++|++++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2eop_A 10 EKPHECRECGKSFSFNSQLIVHQRIHTGEN 39 (46)
T ss_dssp CCSCBCTTTCCBCSSHHHHHHHHTTTTTSC
T ss_pred CCCeeCCCCCchhCCHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999864
No 124
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=97.54 E-value=2.2e-05 Score=62.66 Aligned_cols=31 Identities=29% Similarity=0.589 Sum_probs=28.4
Q ss_pred CCCccccCccccccCccccchhHHhhcchhh
Q 048174 1112 PPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1112 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
..++|+|++|++.|.+..+|..|+++|++++
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2el6_A 9 GVNPYKCSQCEKSFSGKLRLLVHQRMHTREK 39 (46)
T ss_dssp CCCSEECSSSSCEESSHHHHHHHHGGGCCSS
T ss_pred CCCCeECCCCCcccCCHHHHHHHHHHcCCCC
Confidence 3489999999999999999999999999864
No 125
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=97.54 E-value=2.3e-05 Score=62.57 Aligned_cols=30 Identities=33% Similarity=0.577 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.....|..||++|++++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~ 39 (46)
T 2em0_A 10 EKTWKCRECDMCFSQASSLRLHQNVHVGEK 39 (46)
T ss_dssp CCCCCCSSSCCCCSSHHHHHHHGGGGSSSS
T ss_pred CcCeECCCCCcccCCHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999864
No 126
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.54 E-value=1.9e-05 Score=63.05 Aligned_cols=30 Identities=30% Similarity=0.682 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2ene_A 10 EKPYKCNECGKVFRHNSYLSRHQRIHTGEK 39 (46)
T ss_dssp SSSEECSSSCCEESSHHHHHHHHTTTCCCC
T ss_pred CCCeECCCCCchhCChHHHHHHHhhcCCCC
Confidence 489999999999999999999999999764
No 127
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.54 E-value=2.6e-05 Score=70.69 Aligned_cols=55 Identities=16% Similarity=0.412 Sum_probs=41.9
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcchhh
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+..+.+|.|..|+ |...+.+. ...+++|.|++|++.|.+..+|..||++|.+++
T Consensus 9 ~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~------~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~ 74 (86)
T 1x6h_A 9 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP------NFVPAAFVCSKCGKTFTRRNTMARHADNCAGPD 74 (86)
T ss_dssp TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS------SCCCCCEECSSSCCEESCHHHHHHHHHHCCCCC
T ss_pred eecCCCCCcCCCCCCccCCHHHHHHHHHHhcCC------cCCCcceECCCCCChhCCHHHHHHHHHHccCCC
Confidence 45678899999996 22222222 123579999999999999999999999999754
No 128
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.54 E-value=2.1e-05 Score=62.78 Aligned_cols=30 Identities=27% Similarity=0.500 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.....|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~ 39 (46)
T 2en3_A 10 EKPFQCKECGMNFSWSCSLFKHLRSHERTD 39 (46)
T ss_dssp CCSEECSSSCCEESSSHHHHHHHHHHHHSC
T ss_pred CCCeeCcccChhhCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999864
No 129
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.54 E-value=1.9e-05 Score=62.99 Aligned_cols=30 Identities=30% Similarity=0.659 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..|+++|++++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2eor_A 10 EKPYNCEECGKAFIHDSQLQEHQRIHTGEK 39 (46)
T ss_dssp CCSEECTTTCCEESSHHHHHHHHHHHHSCC
T ss_pred CcCccCCCCCCCcCCHHHHHHHHHhcCCCC
Confidence 489999999999999999999999999764
No 130
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.54 E-value=2.2e-05 Score=62.59 Aligned_cols=30 Identities=27% Similarity=0.685 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2ytr_A 10 EKPYKCNECGKAFSQTSKLARHQRIHTGEK 39 (46)
T ss_dssp CCTTCCTTTCCCCSSHHHHHHHHTTTTTCS
T ss_pred CcCcCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence 489999999999999999999999999764
No 131
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.54 E-value=2.1e-05 Score=62.72 Aligned_cols=30 Identities=27% Similarity=0.603 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..||++|++++
T Consensus 10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~ 39 (46)
T 2eoe_A 10 EKPYKCNECGKVFTQNSHLANHQRIHTGVK 39 (46)
T ss_dssp CCSSEETTTTEECSSHHHHHHHHGGGSCCC
T ss_pred CCCeECCCcChhhCCHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999764
No 132
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.54 E-value=2.2e-05 Score=62.70 Aligned_cols=30 Identities=27% Similarity=0.646 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..|+++|++++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2eoq_A 10 EKPFKCDICGKSFCGRSRLNRHSMVHTAEK 39 (46)
T ss_dssp SCSCCCSSSCCCCSSHHHHHHHHHHTTCCC
T ss_pred CCCcCCCcCCchhCCHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999864
No 133
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.54 E-value=3.8e-05 Score=72.34 Aligned_cols=55 Identities=18% Similarity=0.313 Sum_probs=38.5
Q ss_pred cccceecCCCccCC-ccCCCCC-CCCcCCCCCccccCccccccCccccchhH-Hhhcch
Q 048174 1085 VKEKWECEKCSCSE-AQHGQSS-CGLIVWPPKNYNCSFCRREFRSAQALGGH-MNVHRR 1140 (1303)
Q Consensus 1085 ~~~~~~c~~c~~~~-~~~~~~~-~~~~~~~~~~~~c~~c~~~f~~~~~l~~h-~~~h~~ 1140 (1303)
.+++|+|+.|+..- .....-. --..- ..++|+|.+|||.|.+...|..| |++|++
T Consensus 31 ~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~ 88 (96)
T 2ctd_A 31 DKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNS 88 (96)
T ss_dssp HTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred CCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence 46789999997433 2110000 00001 34899999999999999999999 999985
No 134
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.54 E-value=1.9e-05 Score=63.09 Aligned_cols=30 Identities=30% Similarity=0.616 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.....|..||++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2yu8_A 10 EKPYKCNECGKVFTQNSHLARHRRVHTGGK 39 (46)
T ss_dssp CSSEECSSSCCEESSSHHHHHHTHHHHSCC
T ss_pred CCCeECCcCCchhCCHHHHHHHHHhcCCCC
Confidence 489999999999999999999999999764
No 135
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.53 E-value=2e-05 Score=62.92 Aligned_cols=30 Identities=23% Similarity=0.534 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|||.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k 39 (46)
T 2emy_A 10 ENPYECHECGKAFSRKYQLISHQRTHAGEK 39 (46)
T ss_dssp SCCEECSSSCCEESSHHHHHHHHHHHTTSC
T ss_pred CcCcCCCCCCcccCcHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999863
No 136
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.53 E-value=2.3e-05 Score=62.48 Aligned_cols=30 Identities=27% Similarity=0.676 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++||+.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2eme_A 10 EKPYVCDYCGKAFGLSAELVRHQRIHTGEK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHGGGCCCS
T ss_pred CCCeECCCCChhhCCHHHHHHHHHhcCCCC
Confidence 489999999999999999999999999764
No 137
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.53 E-value=2e-05 Score=62.85 Aligned_cols=30 Identities=30% Similarity=0.650 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k 39 (46)
T 2eq0_A 10 EKPYKCHECGKVFRRNSHLARHQLIHTGEK 39 (46)
T ss_dssp CCCEECTTTCCEESSHHHHHHHHTTTCCCC
T ss_pred CCCeECCCCCchhCCHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999764
No 138
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=97.53 E-value=2.3e-05 Score=62.42 Aligned_cols=30 Identities=40% Similarity=0.704 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2em9_A 10 EKPYNCKECGKSFRWASCLLKHQRVHSGEK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHGGGGTSCC
T ss_pred CcCeECCccccccCChHHHHHHHHHhCCCC
Confidence 489999999999999999999999999764
No 139
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.53 E-value=2e-05 Score=63.03 Aligned_cols=30 Identities=33% Similarity=0.608 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2yto_A 10 EKPYKCSDCGKAFTRKSGLHIHQQSHTGER 39 (46)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHHHHTCCC
T ss_pred CCCEECcccCCccCCHhHHHHHHHHcCCCC
Confidence 489999999999999999999999999864
No 140
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.52 E-value=2.3e-05 Score=63.38 Aligned_cols=33 Identities=24% Similarity=0.446 Sum_probs=29.7
Q ss_pred CCCCCccccCccccccCccccchhHHhhcchhh
Q 048174 1110 VWPPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1110 ~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
....++|+|.+|++.|.....|..||++|++++
T Consensus 7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (48)
T 2epr_A 7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEK 39 (48)
T ss_dssp CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCC
T ss_pred CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCC
Confidence 345689999999999999999999999999864
No 141
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=97.52 E-value=1.5e-05 Score=70.33 Aligned_cols=48 Identities=23% Similarity=0.573 Sum_probs=38.1
Q ss_pred ccccccceecC--CCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcc
Q 048174 1082 MEWVKEKWECE--KCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHR 1139 (1303)
Q Consensus 1082 ~~~~~~~~~c~--~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~ 1139 (1303)
.+..+++|+|. .|+ |...+.+ .++|+|++||+.|.+...|..|+++|+
T Consensus 13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~----------~~~~~C~~C~~~f~~~~~l~~H~~~Ht 73 (73)
T 1f2i_G 13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTG----------QKPFQCRICMRNFSRSDHLTTHIRTHT 73 (73)
T ss_dssp CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHC----------CCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCC----------CCCeECCCCCchhCCHHHHHHHHHhcC
Confidence 34577899996 696 2233333 388999999999999999999999995
No 142
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.52 E-value=2.2e-05 Score=62.66 Aligned_cols=30 Identities=27% Similarity=0.583 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||.|++|++.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2ytj_A 10 EKPYICAECGKAFTIRSNLIKHQKIHTKQK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHTSCCC
T ss_pred CcCeECCCCChhhCCHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999764
No 143
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=97.52 E-value=2.3e-05 Score=62.61 Aligned_cols=30 Identities=30% Similarity=0.618 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.....|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k 39 (46)
T 2emk_A 10 EKPYECKECGKAFSQTTHLIQHQRVHTGEK 39 (46)
T ss_dssp SCSCBCSSSCCBCSCHHHHHHHHHHHSSCC
T ss_pred CCceECCCCCchhCCHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999864
No 144
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.52 E-value=2e-05 Score=62.95 Aligned_cols=30 Identities=27% Similarity=0.582 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.++|+|++|++.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2em8_A 10 EKPYKCVECGKGYKRRLDLDFHQRVHTGEK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHHHCCC
T ss_pred CCCeECcccCchhCCHHHHHHHHHHHcCCC
Confidence 489999999999999999999999999764
No 145
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.52 E-value=2.2e-05 Score=62.55 Aligned_cols=30 Identities=27% Similarity=0.637 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.....|..|+++|++++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2yrj_A 10 EKPYRCGECGKAFAQKANLTQHQRIHTGEK 39 (46)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHTTTSSCC
T ss_pred CCCeECCCCCCccCCHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999764
No 146
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.52 E-value=2.4e-05 Score=62.35 Aligned_cols=30 Identities=33% Similarity=0.580 Sum_probs=27.8
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++||+.|.+...|..|+++|++++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2eov_A 10 EKPYKCSDCGKSFTWKSRLRIHQKCHTGER 39 (46)
T ss_dssp CCSCBCSSSCCBCSSHHHHHHHHHHHSCCS
T ss_pred CCCccCCccChhhCCHHHHHHHHHhcCCCC
Confidence 489999999999999999999999999763
No 147
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.51 E-value=1.9e-05 Score=63.10 Aligned_cols=30 Identities=30% Similarity=0.721 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.....|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2eoz_A 10 EKPYSCNVCGKAFVLSAHLNQHLRVHTQET 39 (46)
T ss_dssp CCSEEETTTTEEESSHHHHHHHHHHHSSCC
T ss_pred CCCeECcccChhhCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999864
No 148
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.51 E-value=2e-05 Score=62.86 Aligned_cols=30 Identities=23% Similarity=0.630 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|+|.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k 39 (46)
T 2emh_A 10 ERPYICTVCGKAFTDRSNLIKHQKIHTGEK 39 (46)
T ss_dssp CCSEECTTTCCEESSHHHHHHHHHHHHCSS
T ss_pred CCCcCCCCCCchhCCHHHHHHHHHhcCCCC
Confidence 489999999999999999999999999764
No 149
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=97.51 E-value=2.3e-05 Score=62.49 Aligned_cols=30 Identities=27% Similarity=0.669 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|+|.|.....|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2ema_A 10 EKRYKCNECGKVFSRNSQLSQHQKIHTGEK 39 (46)
T ss_dssp SCCEECSSSCCEESSHHHHHHHHTGGGCCC
T ss_pred CcCcCCCCCcchhCCHHHHHHHHHhcCCCC
Confidence 489999999999999999999999999764
No 150
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.51 E-value=2.1e-05 Score=62.80 Aligned_cols=30 Identities=27% Similarity=0.563 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..||++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2emp_A 10 VKPYMCNECGKAFSVYSSLTTHQVIHTGEK 39 (46)
T ss_dssp CCSEECSSSCCEESCHHHHHHHHHHHHCCS
T ss_pred CcCeECCCCCchhCCHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999864
No 151
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.50 E-value=2.2e-05 Score=62.61 Aligned_cols=30 Identities=33% Similarity=0.636 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2ytd_A 10 EKPYKCSECGKAFHRHTHLNEHRRIHTGYR 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHHTCCC
T ss_pred CcCeECCCCCCeeCChHHHHHHHHHcCCCC
Confidence 489999999999999999999999999864
No 152
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.50 E-value=2.6e-05 Score=60.53 Aligned_cols=31 Identities=26% Similarity=0.543 Sum_probs=28.4
Q ss_pred CCCccccCccccccCccccchhHHhhcchhh
Q 048174 1112 PPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1112 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
..+||+|++|++.|.....|..|+++|++++
T Consensus 7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 37 (41)
T 2ept_A 7 GQRVYECQECGKSFRQKGSLTLHERIHTGSG 37 (41)
T ss_dssp CCCCEECSSSCCEESSHHHHHHHGGGCCCCS
T ss_pred CCCCeECCCCCCCcCCHHHHHHHHHHhCCCC
Confidence 3489999999999999999999999999864
No 153
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.50 E-value=2.3e-05 Score=62.46 Aligned_cols=30 Identities=20% Similarity=0.487 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2emm_A 10 ERPHKCNECGKSFIQSAHLIQHQRIHTGEK 39 (46)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHHHSCCC
T ss_pred CCCeeCCCCChhhCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999864
No 154
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.50 E-value=2e-05 Score=62.27 Aligned_cols=30 Identities=33% Similarity=0.687 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..|+++|++++
T Consensus 10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~ 39 (44)
T 2eox_A 10 SKSYNCNECGKAFTRIFHLTRHQKIHTRKS 39 (44)
T ss_dssp CCCEEETTTTEEESSSHHHHTTHHHHCCCC
T ss_pred CCCeECcccCcccCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999764
No 155
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.50 E-value=2.4e-05 Score=62.52 Aligned_cols=30 Identities=27% Similarity=0.558 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++||+.|.+...|..|+++|++++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2em5_A 10 TKSHQCHECGRGFTLKSHLNQHQRIHTGEK 39 (46)
T ss_dssp SCSEECSSSCCEESSHHHHHHHHTTTSCSC
T ss_pred CCCeECCcCCCccCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999764
No 156
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.50 E-value=2.4e-05 Score=62.43 Aligned_cols=30 Identities=23% Similarity=0.327 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++||+.|.+...|..||++|++++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2yso_A 10 EKSHQCRECGEIFFQYVSLIEHQVLHMGQK 39 (46)
T ss_dssp CCCEECTTTCCEESSHHHHHHHHHHHSCCS
T ss_pred CCCEEccccChhhCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999764
No 157
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.49 E-value=2.4e-05 Score=62.37 Aligned_cols=30 Identities=23% Similarity=0.585 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..||++|++++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2ytg_A 10 EKPFKCGECGKSYNQRVHLTQHQRVHTGEK 39 (46)
T ss_dssp CCSEECTTTCCEESSSHHHHTTGGGGSSCC
T ss_pred CCCeECCCCCcccCCHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999864
No 158
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.49 E-value=2.1e-05 Score=62.72 Aligned_cols=30 Identities=27% Similarity=0.645 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.++|+|++|++.|.....|..||++|++++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2en6_A 10 EKPYGCNECGKTFSQKSILSAHQRTHTGEK 39 (46)
T ss_dssp SCCEEETTTTEEESSHHHHHHHHHHHSSCC
T ss_pred CcCeECCCCCcccCchHHHHHHHHHcCCCC
Confidence 489999999999999999999999999764
No 159
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.49 E-value=2.5e-05 Score=62.29 Aligned_cols=30 Identities=30% Similarity=0.497 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.....|..||++|++++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2en8_A 10 EKSHTCDECGKNFCYISALRIHQRVHMGEK 39 (46)
T ss_dssp CSSEECTTTCCEESSHHHHHHHHTTTCCSC
T ss_pred CCCeECCCcCcccCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999864
No 160
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=97.47 E-value=1.5e-05 Score=71.44 Aligned_cols=48 Identities=21% Similarity=0.442 Sum_probs=37.5
Q ss_pred cccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcch
Q 048174 1083 EWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRR 1140 (1303)
Q Consensus 1083 ~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~ 1140 (1303)
+..+.+|.|..|+ |...+.+ .++|+|++|++.|.+...|..||++|+|
T Consensus 24 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~----------~~~~~C~~C~~~f~~~~~l~~H~~~H~g 82 (82)
T 2kmk_A 24 HSDTRPYPCQYCGKRFHQKSDMKKHTFIHTG----------EKPHKCQVCGKAFSQSSNLITHSRKHTG 82 (82)
T ss_dssp HHTCCCEECSSSCCEESSHHHHHHHHHHHHT----------CCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred cCCCCCeeCCcCChhhCCHHHHHHHHHHhcC----------CCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence 3456789999996 2233333 3789999999999999999999999975
No 161
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.47 E-value=2.6e-05 Score=62.23 Aligned_cols=30 Identities=27% Similarity=0.647 Sum_probs=28.0
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+...|..|+++|++++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2ytk_A 10 EKPYKCNECGKVFTQNSHLTNHWRIHTGEK 39 (46)
T ss_dssp SCSEECSSSCCEESSHHHHHHHHHHHSSSS
T ss_pred CCCEeCCcCCCccCCHHHHHHHHHHHCCCC
Confidence 489999999999999999999999999864
No 162
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.47 E-value=2.6e-05 Score=62.13 Aligned_cols=30 Identities=27% Similarity=0.640 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||.|++|++.|.....|..|+++|++++
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2eq3_A 10 EKPYECNQCGKAFSVRSSLTTHQAIHTGKK 39 (46)
T ss_dssp CCSSEETTTTEECSSHHHHHHHHTTSCCCC
T ss_pred CCCeECCCCChhhCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999763
No 163
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=97.47 E-value=2.5e-05 Score=72.54 Aligned_cols=50 Identities=18% Similarity=0.464 Sum_probs=39.2
Q ss_pred cccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcchhh
Q 048174 1083 EWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1083 ~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
+..+.+|.|..|+ |...+.+ .++|+|++|++.|.+...|..|+++|++++
T Consensus 31 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~----------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~ 91 (96)
T 2dmd_A 31 HTGVKPYKCKTCDYAAADSSSLNKHLRIHSD----------ERPFKCQICPYASRNSSQLTVHLRSHTGDS 91 (96)
T ss_dssp CCCCCSEECSSSCCEESSHHHHHHHHHHSCC----------CCCEECSSSSCEESSHHHHHHHHTTCCSCC
T ss_pred cCCCCCEeCCCCCCccCCHHHHHHHHHHhCC----------CCCccCCCCCCccCCHHHHHHHHHHhcCCC
Confidence 4556789999995 2233333 378999999999999999999999999753
No 164
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.46 E-value=3.3e-05 Score=60.87 Aligned_cols=31 Identities=19% Similarity=0.369 Sum_probs=28.5
Q ss_pred CCCccccCccccccCccccchhHHhhcchhh
Q 048174 1112 PPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1112 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
..++|+|.+|++.|.+...|..||++|++++
T Consensus 7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 37 (43)
T 2yrm_A 7 GNGAFFCNECDCRFSEEASLKRHTLQTHSDK 37 (43)
T ss_dssp SSCCBCCSSSCCCBSSHHHHHHHHHHHTCTT
T ss_pred CCCCEECCCCCCeeCChHHHHHHHHhhCCCC
Confidence 3489999999999999999999999999864
No 165
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.45 E-value=3.2e-05 Score=61.82 Aligned_cols=31 Identities=23% Similarity=0.424 Sum_probs=28.5
Q ss_pred CCCccccCccccccCccccchhHHhhcchhh
Q 048174 1112 PPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1112 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
..++|+|++|++.|.....|..|+++|++++
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k 39 (46)
T 2eom_A 9 GERGHRCSDCGKFFLQASNFIQHRRIHTGEK 39 (46)
T ss_dssp CCSSCCCSSSCCCCSSHHHHHHHHHHHSSCC
T ss_pred CCCCcCCCCCCCeeCChHHHHHHHHHhCCCC
Confidence 3589999999999999999999999999864
No 166
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.45 E-value=3.2e-05 Score=61.66 Aligned_cols=31 Identities=29% Similarity=0.707 Sum_probs=28.5
Q ss_pred CCCccccCccccccCccccchhHHhhcchhh
Q 048174 1112 PPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1112 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
..++|+|++|++.|.....|..|+++|++++
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2ep0_A 9 GEKPYKCDVCHKSFRYGSSLTVHQRIHTGEK 39 (46)
T ss_dssp TCCSEECSSSCCEESSHHHHHHHHTTTSSSC
T ss_pred CCCCeeCcccCcccCChHHHHHHHHHhCCCC
Confidence 4589999999999999999999999999864
No 167
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.44 E-value=3e-05 Score=61.81 Aligned_cols=30 Identities=27% Similarity=0.641 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++||+.|.+...|..|+++|++++
T Consensus 10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 39 (46)
T 2en1_A 10 EKPFKCEECGKRFTQNSQLHSHQRVHTGEK 39 (46)
T ss_dssp CCSEEETTTTEEESSHHHHHHHGGGGSCCC
T ss_pred CCCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999763
No 168
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.43 E-value=3.4e-05 Score=61.61 Aligned_cols=31 Identities=32% Similarity=0.623 Sum_probs=28.5
Q ss_pred CCCccccCccccccCccccchhHHhhcchhh
Q 048174 1112 PPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1112 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
..++|+|++|++.|.+...|..||++|++++
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 39 (46)
T 2ytt_A 9 GEKPYQCSECGKSFSGSYRLTQHWITHTREK 39 (46)
T ss_dssp CCCTTCCSSSCCCCSSHHHHHHHHTHHHHCC
T ss_pred CCCCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence 3589999999999999999999999999864
No 169
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=97.43 E-value=4.4e-05 Score=66.47 Aligned_cols=49 Identities=22% Similarity=0.256 Sum_probs=34.6
Q ss_pred hhHHHHHHhhccccceeccccccchh-hhHHHHHHHHHHHHHHHhhcchh
Q 048174 702 VQAAVCIQSSCRGILARRYCKVKKKE-AAAVKIQKNSRTMMTRKAYSNVK 750 (1303)
Q Consensus 702 r~aai~IQa~~Rg~laRk~~~~~r~~-~AAi~IQ~~~Rg~~aRr~~~k~r 750 (1303)
...++.||+.+||+++|+.|.++..+ .|+.+||+++|+|..++.+...+
T Consensus 6 ~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~w~W~~ 55 (64)
T 1wdc_A 6 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQWWK 55 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHH
Confidence 34556666666666666666665544 45669999999999999887544
No 170
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.42 E-value=6.3e-05 Score=65.94 Aligned_cols=33 Identities=33% Similarity=0.523 Sum_probs=28.6
Q ss_pred CCCCccccCc--cccccCccccchhHH-hhcchhhh
Q 048174 1111 WPPKNYNCSF--CRREFRSAQALGGHM-NVHRRDRA 1143 (1303)
Q Consensus 1111 ~~~~~~~c~~--c~~~f~~~~~l~~h~-~~h~~~~~ 1143 (1303)
...|||+|++ |+|.|...+.|..|| ++|++|+-
T Consensus 23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP 58 (73)
T 1x3c_A 23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLP 58 (73)
T ss_dssp CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCC
T ss_pred cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCC
Confidence 3569999976 999999999999998 79998753
No 171
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=97.42 E-value=3.5e-05 Score=66.87 Aligned_cols=50 Identities=22% Similarity=0.317 Sum_probs=37.6
Q ss_pred hhhHHHHHHhhccccceeccccccchh-hhHHHHHHHHHHHHHHHhhcchh
Q 048174 701 LVQAAVCIQSSCRGILARRYCKVKKKE-AAAVKIQKNSRTMMTRKAYSNVK 750 (1303)
Q Consensus 701 ~r~aai~IQa~~Rg~laRk~~~~~r~~-~AAi~IQ~~~Rg~~aRr~~~k~r 750 (1303)
+...++.||+.+||+++|+.|.++..+ .|+.+||+++|+|..++.+...+
T Consensus 3 l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~w~W~~ 53 (63)
T 2bl0_A 3 IGEIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKNWAWWK 53 (63)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHHH
Confidence 345567778888888888777776544 45569999999999999887543
No 172
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=97.40 E-value=4.3e-05 Score=70.88 Aligned_cols=50 Identities=24% Similarity=0.545 Sum_probs=40.7
Q ss_pred cccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcchhh
Q 048174 1083 EWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1083 ~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
+..+++|+|..|+ |...+.+ .++|.|++|++.|.+...|..|+++|.+++
T Consensus 3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~----------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~ 63 (96)
T 2dmd_A 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTG----------VKPYKCKTCDYAAADSSSLNKHLRIHSDER 63 (96)
T ss_dssp CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCC----------CCSEECSSSCCEESSHHHHHHHHHHSCCCC
T ss_pred CCCCcCeECCCCCCccCCHHHHHHHHHhcCC----------CCCEeCCCCCCccCCHHHHHHHHHHhCCCC
Confidence 4567899999996 3333332 489999999999999999999999998753
No 173
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.38 E-value=5.1e-05 Score=60.64 Aligned_cols=30 Identities=27% Similarity=0.533 Sum_probs=27.9
Q ss_pred CCccccCccccccCccccchhHHh-hcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMN-VHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~-~h~~~~ 1142 (1303)
.+||+|++|++.|.....|..|++ +|++++
T Consensus 10 ~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k 40 (47)
T 2epx_A 10 KKPYECIECGKAFIQNTSLIRHWRYYHTGEK 40 (47)
T ss_dssp CCSBCCSSSCCCBSSHHHHHHHHTTTTTTSC
T ss_pred CCCEECCccCchhCChHHHHHHhHhhcCCCC
Confidence 489999999999999999999999 999764
No 174
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.38 E-value=2.8e-05 Score=59.16 Aligned_cols=29 Identities=24% Similarity=0.378 Sum_probs=27.1
Q ss_pred CCccccCccccccCccccchhH-Hhhcchh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGH-MNVHRRD 1141 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h-~~~h~~~ 1141 (1303)
.|||+|+.|++.|.+...|..| +++|+++
T Consensus 7 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~ 36 (37)
T 2elm_A 7 GHLYYCSQCHYSSITKNCLKRHVIQKHSNI 36 (37)
T ss_dssp SCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred CcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence 4899999999999999999999 9999864
No 175
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=97.36 E-value=2.2e-05 Score=78.67 Aligned_cols=50 Identities=20% Similarity=0.529 Sum_probs=42.1
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcchh
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRD 1141 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~ 1141 (1303)
.+.++.+|+|+.|+ |...++|+ +||.|++||+.|.+...|..|+++|.++
T Consensus 44 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~----------k~~~C~~C~k~F~~~~~L~~H~~~hh~~ 104 (133)
T 2lt7_A 44 IHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGE----------RRYQCLACGKSFINYQFMSSHIKSVHSQ 104 (133)
T ss_dssp HHHCCSCEECSSSSCEESSHHHHHHHHHHHHTC----------CCEEESSSCCEESSHHHHHHHHHHHTCC
T ss_pred HcCCCCCeeCCccCeecccccchhhhccccCCC----------ccccCCCCCCCcCCHHHHHHHhHHhcCC
Confidence 45678899999996 44445554 8999999999999999999999999865
No 176
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=97.35 E-value=3.7e-05 Score=63.87 Aligned_cols=30 Identities=17% Similarity=0.452 Sum_probs=28.1
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||.|++||+.|.+...|..||++|++++
T Consensus 22 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k 51 (54)
T 1yui_A 22 EQPATCPICYAVIRQSRNLRRHLELRHFAK 51 (54)
T ss_dssp SCCEECTTTCCEESSHHHHHHHHHHHTTTS
T ss_pred CCCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence 489999999999999999999999999874
No 177
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.33 E-value=4.6e-05 Score=60.49 Aligned_cols=31 Identities=23% Similarity=0.520 Sum_probs=28.6
Q ss_pred CCCccccCccccccCccccchhHHhhcchhh
Q 048174 1112 PPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1112 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
..|||+|++|++.|.....|..||++|++++
T Consensus 7 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~ 37 (45)
T 2epq_A 7 GEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV 37 (45)
T ss_dssp SCCSSEETTTTEECSCHHHHHHHHHHHSCCC
T ss_pred CCCCCcCCCCCcccCCHHHHHHHHHHccCCC
Confidence 4589999999999999999999999999864
No 178
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=97.33 E-value=4.3e-05 Score=62.04 Aligned_cols=32 Identities=22% Similarity=0.566 Sum_probs=27.0
Q ss_pred CCccccCccccccCccccchhHHh-hcchhhhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMN-VHRRDRAR 1144 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~-~h~~~~~~ 1144 (1303)
.|||.|.+|||.|.....|..||+ +|+++...
T Consensus 5 ~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~ 37 (48)
T 3iuf_A 5 DKPYACDICGKRYKNRPGLSYHYAHSHLAEEEG 37 (48)
T ss_dssp TSCEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred CcCEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence 489999999999999999999999 99987543
No 179
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.28 E-value=6.6e-05 Score=60.48 Aligned_cols=30 Identities=27% Similarity=0.656 Sum_probs=27.5
Q ss_pred CCccccC--ccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCS--FCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~--~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.|||+|. .|||.|.....|..|+++|++++
T Consensus 16 ~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek 47 (47)
T 1ncs_A 16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47 (47)
T ss_dssp TTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred CCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence 4899996 69999999999999999999874
No 180
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.26 E-value=5.7e-05 Score=65.41 Aligned_cols=56 Identities=18% Similarity=0.214 Sum_probs=39.1
Q ss_pred ccccceecCCCccCCccCCCC-CCCCcCCCCCccccC-ccccccCccccchhHHhhcchh
Q 048174 1084 WVKEKWECEKCSCSEAQHGQS-SCGLIVWPPKNYNCS-FCRREFRSAQALGGHMNVHRRD 1141 (1303)
Q Consensus 1084 ~~~~~~~c~~c~~~~~~~~~~-~~~~~~~~~~~~~c~-~c~~~f~~~~~l~~h~~~h~~~ 1141 (1303)
-.+++|.|..|+..-. ...- .--.. .+.+||+|+ .||+.|.....|..||++|-..
T Consensus 6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~ 63 (66)
T 2eod_A 6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNT 63 (66)
T ss_dssp CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSS
T ss_pred CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhccc
Confidence 4567899999963221 0000 00001 345899999 9999999999999999999754
No 181
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.25 E-value=0.00014 Score=69.39 Aligned_cols=53 Identities=17% Similarity=0.426 Sum_probs=41.5
Q ss_pred cccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcchhhhhh
Q 048174 1083 EWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRDRARL 1145 (1303)
Q Consensus 1083 ~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~ 1145 (1303)
+..+.+|+|..|+ |...+.+ .++|+|++|++.|.+...|..||+.|.+.....
T Consensus 32 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~----------~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~ 95 (110)
T 2csh_A 32 HLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG----------IKPYECNICAKRFMWRDSFHRHVTSCTKSYEAA 95 (110)
T ss_dssp HSCCCSEECTTTSCEESSSHHHHHHHTTTCC----------CCCEECSSSCCEESCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcCccCCCCCcccCCHHHHHHHHHHcCC----------CCCeeCCCCcchhcCHHHHHHHHHHccccccch
Confidence 4556789999995 3333333 378999999999999999999999998765544
No 182
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=97.24 E-value=5.8e-05 Score=53.29 Aligned_cols=27 Identities=30% Similarity=0.625 Sum_probs=25.3
Q ss_pred CccccC--ccccccCccccchhHHhhcch
Q 048174 1114 KNYNCS--FCRREFRSAQALGGHMNVHRR 1140 (1303)
Q Consensus 1114 ~~~~c~--~c~~~f~~~~~l~~h~~~h~~ 1140 (1303)
+||+|+ .||+.|.....|..|+++|++
T Consensus 1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~ 29 (29)
T 2ab3_A 1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG 29 (29)
T ss_dssp CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence 589999 999999999999999999974
No 183
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.24 E-value=6.1e-05 Score=71.87 Aligned_cols=51 Identities=25% Similarity=0.593 Sum_probs=41.0
Q ss_pred cccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcchhh
Q 048174 1081 SMEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1081 ~~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
+.+..+++|.| .|+ |...+.+ .++|+|++|++.|.+...|..|+++|.+++
T Consensus 3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~----------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~ 64 (110)
T 2csh_A 3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLG----------LRPYGCGVCGKKFKMKHHLVGHMKIHTGIK 64 (110)
T ss_dssp CCCCCCCCEEC-TTSCEESSHHHHHHHHHHHSC----------CCSEECTTTSCEESSSHHHHHHHTTTCCCC
T ss_pred CCCCCCCCEec-cCCCccCCHHHHHHHHHHcCC----------CcCccCCCCCcccCCHHHHHHHHHHcCCCC
Confidence 45677889999 896 3333333 378999999999999999999999998764
No 184
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=97.23 E-value=4.7e-05 Score=69.83 Aligned_cols=45 Identities=20% Similarity=0.600 Sum_probs=36.6
Q ss_pred ccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcch
Q 048174 1086 KEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRR 1140 (1303)
Q Consensus 1086 ~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~ 1140 (1303)
+++|.|..|+ |...+.++ +||+|++|++.|.+..+|..|+++|.+
T Consensus 1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~----------~~~~C~~C~k~f~~~~~L~~H~~~h~~ 56 (88)
T 1llm_C 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGE----------KPFACDICGRKFARSDERKRHRDIQHI 56 (88)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHHHHHCC----------CCEECTTTCCEESSHHHHHHHHHHHTH
T ss_pred CCCCcCCCCCCccCCHHHHHHHHHHcCCC----------CCccCCCCCCccCCHHHHHHHHHHhCC
Confidence 3689999996 33333333 789999999999999999999999985
No 185
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=97.23 E-value=6.9e-05 Score=70.91 Aligned_cols=50 Identities=22% Similarity=0.648 Sum_probs=40.1
Q ss_pred cccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcchhh
Q 048174 1083 EWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1083 ~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
...+.+|.|..|+ |...+.+ .++|.|++|++.|.+...|..|+++|.+++
T Consensus 12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~----------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~ 72 (106)
T 2ee8_A 12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTD----------ERPYTCDICHKAFRRQDHLRDHRYIHSKEK 72 (106)
T ss_dssp CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCC----------SCCCBCSSSCCBCSCHHHHHHHGGGSCCCC
T ss_pred cCCCcCeECCCCCCccCCHHHHHHHHHHcCC----------CCCcCCCCccchhCCHHHHHHHHHHhCCCC
Confidence 3567789999996 2233333 378999999999999999999999998753
No 186
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=97.22 E-value=6.8e-05 Score=69.36 Aligned_cols=27 Identities=37% Similarity=0.791 Sum_probs=17.9
Q ss_pred CccccCccccccCccccchhHHh-hcch
Q 048174 1114 KNYNCSFCRREFRSAQALGGHMN-VHRR 1140 (1303)
Q Consensus 1114 ~~~~c~~c~~~f~~~~~l~~h~~-~h~~ 1140 (1303)
++|+|++|++.|.+...|..|++ +|.+
T Consensus 64 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~ 91 (95)
T 2yt9_A 64 KPYICQSCGKGFSRPDHLNGHIKQVHSG 91 (95)
T ss_dssp SSBCCSSSCCCBSSHHHHHHHHHHTSCC
T ss_pred CceECCCccchhCCHHHHHHHHHHhcCC
Confidence 56677777777777777777763 6664
No 187
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.21 E-value=8e-05 Score=66.39 Aligned_cols=50 Identities=16% Similarity=0.371 Sum_probs=38.8
Q ss_pred ccccccceecCCCc-----------cCC-ccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcch
Q 048174 1082 MEWVKEKWECEKCS-----------CSE-AQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRR 1140 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~-~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~ 1140 (1303)
.+..+++|+|..|+ |.. .+.+ ..++|+|++|++.|.+...|..||++|.+
T Consensus 9 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~---------~~~~~~C~~C~~~f~~~~~L~~H~~~~H~ 70 (77)
T 2ct1_A 9 THSGEKPYECYICHARFTQSGTMKMHILQKHTE---------NVAKFHCPHCDTVIARKSDLGVHLRKQHS 70 (77)
T ss_dssp CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS---------SCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred ccCCCCCeECCCcCchhCCHHHHHHHHHHhcCC---------CCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence 45678899999996 222 2221 23789999999999999999999998653
No 188
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=97.18 E-value=6e-05 Score=74.23 Aligned_cols=47 Identities=17% Similarity=0.346 Sum_probs=39.2
Q ss_pred cccccceecCCCcc-----------CCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcchh
Q 048174 1083 EWVKEKWECEKCSC-----------SEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRD 1141 (1303)
Q Consensus 1083 ~~~~~~~~c~~c~~-----------~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~ 1141 (1303)
+.++++|.|+.|+. ...+ .+||+|++||+.|.+..+|..|+++|.++
T Consensus 69 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H------------~~~~~C~~C~k~f~~~~~l~~H~~~h~~~ 126 (129)
T 2wbt_A 69 SKAISQFVCPLCLMPFSSSVSLKQHIRYT------------EHTKVCPVCKKEFTSTDSALDHVCKKHNI 126 (129)
T ss_dssp HHHHCSEECTTTCCEESSHHHHHHHHHHT------------CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred hCCCCCeECCCCCcccCCHhHHHHHHHHC------------CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence 55688999999962 2222 37899999999999999999999999874
No 189
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=97.15 E-value=0.0001 Score=68.16 Aligned_cols=49 Identities=22% Similarity=0.489 Sum_probs=40.5
Q ss_pred cccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcchh
Q 048174 1083 EWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRD 1141 (1303)
Q Consensus 1083 ~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~ 1141 (1303)
+.++.+|+|..|+ |...+.+ .++|.|++|++.|.+...|..|+++|.++
T Consensus 2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~----------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~ 61 (95)
T 2yt9_A 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSG----------EKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61 (95)
T ss_dssp CCCCSCEECSSSCCEESSSHHHHHHHHHSCS----------SCSEECSSSCCEESCHHHHHHHHHHHCCC
T ss_pred CCCCCCeECCCCCCccCChHHHHHHHHhcCC----------CCCCcCCCCCCccCCHHHHHHHHHHhcCC
Confidence 3567889999996 3333333 37899999999999999999999999987
No 190
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.15 E-value=8.4e-05 Score=56.49 Aligned_cols=30 Identities=23% Similarity=0.440 Sum_probs=27.6
Q ss_pred CCccccC--ccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCS--FCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~--~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|. .|++.|.+...|..|+++|++++
T Consensus 4 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k 35 (38)
T 1bhi_A 4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTL 35 (38)
T ss_dssp CCCEECCCTTTCCEESSHHHHHHHHHHHHTTT
T ss_pred CcceECCCCCCCcccCCHHHHHHHHHHhCCCC
Confidence 4899999 59999999999999999999874
No 191
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=97.13 E-value=0.1 Score=54.53 Aligned_cols=29 Identities=7% Similarity=-0.075 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 858 EVKECDITNKGIEVHVKECDTTDRAIEVY 886 (1303)
Q Consensus 858 ~~~E~~kL~~~ve~Le~qlee~e~~~~~l 886 (1303)
.....+.|+.++..|..+++.++.++...
T Consensus 54 ~Ek~~~~L~~~~~~L~~E~e~~k~K~~~~ 82 (189)
T 2v71_A 54 AEQRNRDLQADNQRLKYEVEALKEKLEHQ 82 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445556666666666666665444443
No 192
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=97.12 E-value=0.00012 Score=56.10 Aligned_cols=30 Identities=23% Similarity=0.397 Sum_probs=25.8
Q ss_pred CCCCccccCccccccCccccchhHHhhcch
Q 048174 1111 WPPKNYNCSFCRREFRSAQALGGHMNVHRR 1140 (1303)
Q Consensus 1111 ~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~ 1140 (1303)
..+|||+|+.|||.|++.+.|..||.-|-.
T Consensus 4 ~gekp~~C~~CgK~F~~~s~L~~H~py~C~ 33 (36)
T 1fv5_A 4 LKPARFMCLPCGIAFSSPSTLEAHQAYYCS 33 (36)
T ss_dssp SSCCCCEETTTTEECSCHHHHHHHHHHTST
T ss_pred CCccCeECCCCCCccCCHhHccCcCCeECc
Confidence 456999999999999999999999955443
No 193
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.12 E-value=9.8e-05 Score=65.83 Aligned_cols=49 Identities=22% Similarity=0.495 Sum_probs=39.1
Q ss_pred ccccceecCC--Cc-----------cCC-ccCCCCCCCCcCCCCCccccCc--cccccCccccchhHHhhcchhh
Q 048174 1084 WVKEKWECEK--CS-----------CSE-AQHGQSSCGLIVWPPKNYNCSF--CRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1084 ~~~~~~~c~~--c~-----------~~~-~~~~~~~~~~~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.++++|.|.- |+ |.. .+.+ .++|+|++ |++.|.+..+|..||++|++++
T Consensus 3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~----------~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~ 67 (79)
T 2dlk_A 3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIH----------QKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67 (79)
T ss_dssp SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGS----------CCCEECSCTTTCCEESSHHHHHHHHHHHHTSC
T ss_pred CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCC----------CCCeECCCCCCcCccCCHHHHHHHHHHhCCCC
Confidence 4567899986 85 333 3333 38999999 9999999999999999999763
No 194
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=97.11 E-value=7e-05 Score=78.86 Aligned_cols=29 Identities=31% Similarity=0.644 Sum_probs=21.5
Q ss_pred CccccCccccccCccccchhHHhhcchhh
Q 048174 1114 KNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1114 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
+||.|++|++.|.+..+|..||++|++++
T Consensus 160 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~k 188 (190)
T 2i13_A 160 KPYKCPECGKSFSRRDALNVHQRTHTGKK 188 (190)
T ss_dssp CCEECTTTCCEESSHHHHHHHHTTC----
T ss_pred CCeECCCCCCccCCHHHHHHHHHhcCCCC
Confidence 77888888888888888888888888764
No 195
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=97.11 E-value=9.6e-05 Score=68.95 Aligned_cols=48 Identities=25% Similarity=0.620 Sum_probs=38.1
Q ss_pred cccccceecC--CCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcch
Q 048174 1083 EWVKEKWECE--KCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRR 1140 (1303)
Q Consensus 1083 ~~~~~~~~c~--~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~ 1140 (1303)
+..+.+|+|. .|+ |...+.+ .++|+|++|++.|.+...|..||++|++
T Consensus 40 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~----------~~~~~C~~C~~~f~~~~~l~~H~~~H~~ 100 (100)
T 2ebt_A 40 HTGEKPYKCTWEGCDWRFARSDELTRHYRKHTG----------AKPFQCGVCNRSFSRSDHLALHMKRHQN 100 (100)
T ss_dssp HSCCCCEECCSSSCCCEESSHHHHHHHHHHHTS----------CCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred hCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCC----------CCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence 4567789995 685 3333333 3889999999999999999999999974
No 196
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=97.08 E-value=0.041 Score=54.53 Aligned_cols=52 Identities=4% Similarity=-0.110 Sum_probs=31.1
Q ss_pred HHHHHHHH-HhhHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 048174 835 RGQEITES-QESQEAVQYIVDETSEVKECDITNKGIEVHVKECDTTDRAIEVYVKE 889 (1303)
Q Consensus 835 LE~kl~eL-~rLe~ee~~r~eee~~~~E~~kL~~~ve~Le~qlee~e~~~~~le~e 889 (1303)
++.++..+ ..+..++..+.+ ......+|..+...|+.+|+.....+..++..
T Consensus 18 ~~eel~~lke~l~k~e~~r~e---le~~~~~l~~Ek~~L~~qL~~E~~~l~e~EE~ 70 (129)
T 2fxo_A 18 MKEEFTRLKEALEKSEARRKE---LEEKMVSLLQEKNDLQLQVQAEQDNLADAEER 70 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 56666666 666666555555 45556666666666666666665444444433
No 197
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=97.07 E-value=7.3e-05 Score=66.94 Aligned_cols=30 Identities=20% Similarity=0.697 Sum_probs=27.5
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.++|.|++|++.|.+...|..|+++|.+++
T Consensus 27 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~ 56 (82)
T 2kmk_A 27 TRPYPCQYCGKRFHQKSDMKKHTFIHTGEK 56 (82)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHHHHHTCC
T ss_pred CCCeeCCcCChhhCCHHHHHHHHHHhcCCC
Confidence 378999999999999999999999998753
No 198
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=97.04 E-value=0.00026 Score=65.17 Aligned_cols=34 Identities=18% Similarity=0.321 Sum_probs=30.4
Q ss_pred cCCCCCccccCccccccCccccchhHHhhcchhh
Q 048174 1109 IVWPPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1109 ~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
...+.++|.|++|||.|.+...|..|+++|++++
T Consensus 22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k 55 (85)
T 2lv2_A 22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQ 55 (85)
T ss_dssp SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSS
T ss_pred CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCC
Confidence 3446789999999999999999999999999875
No 199
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.04 E-value=0.00017 Score=59.79 Aligned_cols=32 Identities=34% Similarity=0.683 Sum_probs=28.1
Q ss_pred CCCCccccCccccccCccccchhHHh-hcchhh
Q 048174 1111 WPPKNYNCSFCRREFRSAQALGGHMN-VHRRDR 1142 (1303)
Q Consensus 1111 ~~~~~~~c~~c~~~f~~~~~l~~h~~-~h~~~~ 1142 (1303)
...+||.|++|++.|.....|..||+ +|++++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k 40 (54)
T 2eps_A 8 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSER 40 (54)
T ss_dssp CSSCCEECSSSCCEESSHHHHHHHHHHTSCCCC
T ss_pred CCCCCeECCCCCcccCCHHHHHHHHHHhcCCCC
Confidence 35689999999999999999999997 998763
No 200
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=97.02 E-value=0.057 Score=55.11 Aligned_cols=73 Identities=8% Similarity=-0.051 Sum_probs=33.5
Q ss_pred HHHHHHHHHH-HhhHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhhcchhhh
Q 048174 833 EERGQEITES-QESQEAVQYIVDETSEVKECDITNKGIEVHVKECDTTDRAIEVYVKECDTKDRATEVHVEDCDDID 908 (1303)
Q Consensus 833 ~~LE~kl~eL-~rLe~ee~~r~eee~~~~E~~kL~~~ve~Le~qlee~e~~~~~le~e~~~~~~~~~~~~ee~~~~k 908 (1303)
..|++++.++ ..|+.|-+.... ..+...++...+..++..+.++.+.+..++..+..++..+-.++..++.++
T Consensus 9 ~~LekQL~E~n~kLk~EsE~~~r---lkK~~tEl~k~~~~~E~~~rELq~~~~~L~~~k~~Leke~~~LQa~L~qEr 82 (168)
T 3o0z_A 9 SQLQKQLEEANDLLRTESDTAVR---LRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDKDYYQLQAILEAER 82 (168)
T ss_dssp -CTHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3377788888 666544332222 233333444444444444444444444444444433333333333343333
No 201
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.99 E-value=0.00013 Score=67.49 Aligned_cols=27 Identities=22% Similarity=0.465 Sum_probs=25.8
Q ss_pred cccCccccccCccccchhHHhhcchhh
Q 048174 1116 YNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1116 ~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
|+|++|++.|.+...|..||++|++++
T Consensus 63 ~~C~~C~k~f~~~~~L~~H~~~H~~~k 89 (95)
T 2ej4_A 63 EECPREGKSFKAKYKLVNHIRVHTGEK 89 (95)
T ss_dssp TTCSSTTCCCSSHHHHHHHHHHHHTCC
T ss_pred cCCCCCCcccCCHHHHHHHHHhcCCCC
Confidence 999999999999999999999999864
No 202
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=96.98 E-value=0.00014 Score=66.28 Aligned_cols=47 Identities=23% Similarity=0.567 Sum_probs=34.2
Q ss_pred cccccceecC--CCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcc
Q 048174 1083 EWVKEKWECE--KCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHR 1139 (1303)
Q Consensus 1083 ~~~~~~~~c~--~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~ 1139 (1303)
+..+.+|.|. .|+ |...+.+ .++|+|++|++.|.+...|..||++|.
T Consensus 30 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~----------~~~~~C~~C~~~f~~~~~l~~H~~~H~ 89 (89)
T 2wbs_A 30 HTGEKPYHCDWDGCGWKFARSDELTRHYRKHTG----------HRPFQCQKCDRAFSRSDHLALHMKRHF 89 (89)
T ss_dssp SCSSCCEECCSTTTCCEESSHHHHHHHHHHHHC----------CCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred cCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCC----------CCCccCCCCCcccCCHHHHHHHHHhhC
Confidence 4556788886 685 2222333 378999999999999999999998884
No 203
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.96 E-value=0.00021 Score=57.22 Aligned_cols=31 Identities=23% Similarity=0.456 Sum_probs=28.1
Q ss_pred CCCccccC--ccccccCccccchhHHhhcchhh
Q 048174 1112 PPKNYNCS--FCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1112 ~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
..+||+|. .|++.|.....|..||++|++++
T Consensus 9 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k 41 (48)
T 2ent_A 9 GEKPFACTWPGCGWRFSRSDELSRHRRSHSGVK 41 (48)
T ss_dssp CCCCEECCSSSCCCEESSHHHHHHHHTTSCCCC
T ss_pred CCCCeECCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence 34899998 89999999999999999999764
No 204
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.95 E-value=0.00012 Score=69.49 Aligned_cols=45 Identities=27% Similarity=0.442 Sum_probs=36.0
Q ss_pred cceecCCCccCC----------ccCCCCCCCCcCCCCCccccCccccccCccccchhHHh-hcchh
Q 048174 1087 EKWECEKCSCSE----------AQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMN-VHRRD 1141 (1303)
Q Consensus 1087 ~~~~c~~c~~~~----------~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~-~h~~~ 1141 (1303)
++|+|..|+..- .+. ..++|+|++|++.|.+...|..|++ +|+++
T Consensus 41 ~~~~C~~C~~~f~~~~~l~~H~~H~----------~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~ 96 (107)
T 1wjp_A 41 NAAVCPYCSLRFFSPELKQEHESKC----------EYKKLTCLECMRTFKSSFSIWRHQVEVHNQN 96 (107)
T ss_dssp HSBCCTTTCCCBSSHHHHHHHHHHC----------STGGGEEGGGTEECSSHHHHHHHHHHTSCCC
T ss_pred CCccCCCCCCccCCHHHHHHHHHcC----------CCCCccCccccchhCCHHHHHHHHHHHcCCC
Confidence 579999996211 133 3489999999999999999999997 99875
No 205
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=96.91 E-value=0.00015 Score=60.34 Aligned_cols=30 Identities=30% Similarity=0.639 Sum_probs=25.6
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|++|++.|.+..+|..|+++|++++
T Consensus 2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~ 31 (57)
T 3uk3_C 2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEK 31 (57)
T ss_dssp ---CBCTTTCCBCSCHHHHHHHHHHHHCCC
T ss_pred CCCccCCCCcchhCChHHHHHHHHHcCCCC
Confidence 489999999999999999999999999754
No 206
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.90 E-value=0.00019 Score=69.55 Aligned_cols=27 Identities=33% Similarity=0.685 Sum_probs=16.6
Q ss_pred CccccCccccccCccccchhHHh-hcch
Q 048174 1114 KNYNCSFCRREFRSAQALGGHMN-VHRR 1140 (1303)
Q Consensus 1114 ~~~~c~~c~~~f~~~~~l~~h~~-~h~~ 1140 (1303)
+||.|++|++.|.+...|..|++ .|.+
T Consensus 93 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~ 120 (124)
T 2dlq_A 93 MPYKCSSCSQQFMQKKDLQSHMIKLHSG 120 (124)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred CCccCCCccchhCCHHHHHHHHHHHCCC
Confidence 55666666666666666666654 4554
No 207
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=96.89 E-value=0.00013 Score=66.68 Aligned_cols=30 Identities=27% Similarity=0.713 Sum_probs=27.5
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.++|.|++|++.|.+...|..|+++|.+++
T Consensus 32 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~ 61 (90)
T 1a1h_A 32 QKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61 (90)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHHHHHCCC
T ss_pred CCCccCCCCCcccCCHHHHHHHHHHcCCCC
Confidence 478999999999999999999999998753
No 208
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.84 E-value=0.0003 Score=61.35 Aligned_cols=32 Identities=31% Similarity=0.363 Sum_probs=29.0
Q ss_pred CCCCccccCccccccCccccchhHHhhcchhh
Q 048174 1111 WPPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1111 ~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+.++|+|++|++.|.+...|..||++|.+++
T Consensus 5 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~ 36 (70)
T 1x5w_A 5 SSGHPEKCSECSYSCSSKAALRIHERIHCTDR 36 (70)
T ss_dssp CCCCSEECSSSSCEESSHHHHHHHHGGGCCSC
T ss_pred CCCCCeECCCCCcccCCHHHHHHHHHHcCCCC
Confidence 34689999999999999999999999999764
No 209
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=96.79 E-value=0.0003 Score=61.16 Aligned_cols=48 Identities=25% Similarity=0.244 Sum_probs=42.1
Q ss_pred HHhhhchhHHHHhhhhhhhhhhhhhhhh---hhHHHHHHhhccccceeccc
Q 048174 674 RAKLLGHSAEVIQSQHRRRVTQKHYITL---VQAAVCIQSSCRGILARRYC 721 (1303)
Q Consensus 674 R~~~l~~aA~~IQ~~~R~~~~Rk~y~~~---r~aai~IQa~~Rg~laRk~~ 721 (1303)
|++.+..+++.||+..|||++|+.|.++ +.|+..||+.+|+|++++..
T Consensus 1 Rd~~l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~w 51 (64)
T 1wdc_A 1 RDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW 51 (64)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 3456778899999999999999999998 78999999999999887643
No 210
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=96.76 E-value=0.00029 Score=61.70 Aligned_cols=45 Identities=27% Similarity=0.660 Sum_probs=32.7
Q ss_pred ccccceecCC--Cc-----------cCCccCCCCCCCCcCCCCCccccCc--cccccCccccchhHHhhc
Q 048174 1084 WVKEKWECEK--CS-----------CSEAQHGQSSCGLIVWPPKNYNCSF--CRREFRSAQALGGHMNVH 1138 (1303)
Q Consensus 1084 ~~~~~~~c~~--c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~h 1138 (1303)
....+|.|.. |+ |...+.++ +||+|++ |++.|.....|..|+++|
T Consensus 13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~----------~~~~C~~~~C~k~f~~~~~l~~H~~~H 72 (72)
T 2epa_A 13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGE----------KPFSCSWKGCERRFARSDELSRHRRTH 72 (72)
T ss_dssp CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSS----------CSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred cccCceeCCCCCCccccCCHHHHHHHHHhcCCC----------CCccCCCCCCCcccCCHHHHHhHhhcC
Confidence 4566788877 85 33333333 7888865 888888888888888887
No 211
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=96.72 E-value=0.00032 Score=58.99 Aligned_cols=28 Identities=25% Similarity=0.679 Sum_probs=26.6
Q ss_pred CccccCccccccCccccchhHHhhcchh
Q 048174 1114 KNYNCSFCRREFRSAQALGGHMNVHRRD 1141 (1303)
Q Consensus 1114 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~ 1141 (1303)
|||+|++|++.|.+...|..|+++|+++
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~ 28 (60)
T 2adr_A 1 RSFVCEVCTRAFARQEHLKRHYRSHTNE 28 (60)
T ss_dssp CCBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred CcCcCCCCccccCCHHHHHHHHHHhCCC
Confidence 6899999999999999999999999975
No 212
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=96.71 E-value=0.00043 Score=67.27 Aligned_cols=29 Identities=28% Similarity=0.789 Sum_probs=19.3
Q ss_pred CccccCc--cccccCccccchhHHhhcchhh
Q 048174 1114 KNYNCSF--CRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1114 ~~~~c~~--c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
++|.|++ |++.|.+..+|..|+++|++++
T Consensus 91 ~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k 121 (124)
T 1ubd_C 91 RPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121 (124)
T ss_dssp CCCCCCSTTCCCCCSSTTTTHHHHHHHC---
T ss_pred CceECCCCCCCCccCCHHHHHHHHHHHcccc
Confidence 6777754 7777777777777777777654
No 213
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=96.71 E-value=0.1 Score=49.88 Aligned_cols=100 Identities=11% Similarity=0.091 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhhcchhhhhhccCCCccCcccCchhHHHHHHHHHHHHHH
Q 048174 860 KECDITNKGIEVHVKECDTTDRAIEVYVKECDTKDRATEVHVEDCDDIDRAIEPHPITGKIPCSNEEEEKIENLSAEVEK 939 (1303)
Q Consensus 860 ~E~~kL~~~ve~Le~qlee~e~~~~~le~e~~~~~~~~~~~~ee~~~~k~~l~e~~~~~e~~~~~~~~~ki~~L~~E~~k 939 (1303)
+..+.|+..++.|..++++|+.++.....+ ....+..|++++..
T Consensus 3 k~~rdL~~~~~~L~~E~e~~k~K~~~~~~e------------------------------------~~~~~~~Lq~El~~ 46 (111)
T 2v66_B 3 QRNRDLQADNQRLKYEVEALKEKLEHQYAQ------------------------------------SYKQVSVLEDDLSQ 46 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------------HHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------------HHHHHHHHHHHHHH
Confidence 345678888888888888888665554433 23456677777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 940 LKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRLLYCMSE 995 (1303)
Q Consensus 940 Le~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl~~ 995 (1303)
|+...+.+...+.++|..+++++.........+++.|.++++.=....-|+..+..
T Consensus 47 lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k~n~aiErnalLE~El~E 102 (111)
T 2v66_B 47 TRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDE 102 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777777777777777777777777777777777777666666666653
No 214
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.71 E-value=0.00053 Score=60.15 Aligned_cols=31 Identities=29% Similarity=0.580 Sum_probs=28.3
Q ss_pred CCCccccCccccccCccccchhHHhhcchhh
Q 048174 1112 PPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1112 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
..++|+|++|++.|.+...|..||++|.+++
T Consensus 11 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~ 41 (72)
T 1x6e_A 11 GEKPYGCVECGKAFSRSSILVQHQRVHTGEK 41 (72)
T ss_dssp TCCCEECSSSCCEESSHHHHHHHHHGGGCSC
T ss_pred CCCCccCCCCCCccCCHHHHHHHHHhcCCCC
Confidence 4589999999999999999999999999753
No 215
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=96.67 E-value=0.00065 Score=56.21 Aligned_cols=38 Identities=16% Similarity=0.302 Sum_probs=29.0
Q ss_pred cccccccceecCCCc-----------cCC-ccCCCCCCCCcCCCCCccccCccccccCcc
Q 048174 1081 SMEWVKEKWECEKCS-----------CSE-AQHGQSSCGLIVWPPKNYNCSFCRREFRSA 1128 (1303)
Q Consensus 1081 ~~~~~~~~~~c~~c~-----------~~~-~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~ 1128 (1303)
+.+..+++|.|+.|+ |.. .+.++ +||+|++|++.|++.
T Consensus 5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~----------k~~~C~~C~k~F~~~ 54 (54)
T 2eps_A 5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSE----------RPHKCQVWVSGPSSG 54 (54)
T ss_dssp CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCC----------CCCCSSSSCCSSCCC
T ss_pred CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCC----------CCccCCCCCCCCCCC
Confidence 345678899999995 433 44443 899999999999874
No 216
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=96.66 E-value=0.00024 Score=68.38 Aligned_cols=50 Identities=22% Similarity=0.626 Sum_probs=38.3
Q ss_pred cccccceecC--CCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcchhh
Q 048174 1083 EWVKEKWECE--KCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1083 ~~~~~~~~c~--~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
+..+.+|.|. .|+ |...+.+ .++|.|++|++.|.+...|..||++|.+++
T Consensus 31 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~----------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~ 93 (119)
T 2jp9_A 31 HTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG----------VKPFQCKTCQRKFSRSDHLKTHTRTHTGEK 93 (119)
T ss_dssp HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHC----------CCCEECTTTCCEESCHHHHHHHHHHHHTCC
T ss_pred hCCCCCccCCCCCCcCccCCHHHHHHHHHHcCC----------CCCccCCccCchhCCHHHHHHHHHHhcCCC
Confidence 3456789998 785 2222333 378999999999999999999999998753
No 217
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.61 E-value=0.00099 Score=63.89 Aligned_cols=30 Identities=30% Similarity=0.515 Sum_probs=27.1
Q ss_pred CCCccccCccccccCccccchhHHhhcchh
Q 048174 1112 PPKNYNCSFCRREFRSAQALGGHMNVHRRD 1141 (1303)
Q Consensus 1112 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~ 1141 (1303)
..+||+|++|++.|.+..+|..||++|...
T Consensus 77 ~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~ 106 (115)
T 2dmi_A 77 AQKVLKCMYCGHSFESLQDLSVHMIKTKHY 106 (115)
T ss_dssp CCSSCBCSSSCCBCSSHHHHHHHHHHTTTT
T ss_pred CCcceECCCCCCccCCHHHHHHHHHHhCCc
Confidence 468999999999999999999999998753
No 218
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=96.59 E-value=0.00043 Score=70.17 Aligned_cols=28 Identities=39% Similarity=0.860 Sum_probs=22.2
Q ss_pred CccccCc--cccccCccccchhHHhhcchh
Q 048174 1114 KNYNCSF--CRREFRSAQALGGHMNVHRRD 1141 (1303)
Q Consensus 1114 ~~~~c~~--c~~~f~~~~~l~~h~~~h~~~ 1141 (1303)
++|.|++ |++.|.+...|..|+++|+++
T Consensus 119 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~ 148 (155)
T 2rpc_A 119 KPFKCEFEGCDRRFANSSDRKKHMHVHTSD 148 (155)
T ss_dssp CSBCCSSTTCCCCBSSHHHHHHSSTTTTSC
T ss_pred CCccCCCCCCCCccCCHHHHHHHHHHhcCC
Confidence 6788886 888888888888888888765
No 219
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.58 E-value=0.00044 Score=66.91 Aligned_cols=60 Identities=22% Similarity=0.394 Sum_probs=39.8
Q ss_pred cccccceecCCCccCCccCCCC----CCCCcCCCCCccccCccccccCccccchhHHhhcchhh
Q 048174 1083 EWVKEKWECEKCSCSEAQHGQS----SCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1083 ~~~~~~~~c~~c~~~~~~~~~~----~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
+..+.+|+|..|+..-.....- .........++|.|++|++.|.+...|..||++|.+++
T Consensus 30 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~ 93 (124)
T 2dlq_A 30 HTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEM 93 (124)
T ss_dssp HSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSC
T ss_pred CCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCC
Confidence 3456789999996221000000 00000124588999999999999999999999999763
No 220
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=96.57 E-value=0.00053 Score=60.45 Aligned_cols=32 Identities=31% Similarity=0.655 Sum_probs=29.0
Q ss_pred CCCCccccCccccccCccccchhHHhhcchhh
Q 048174 1111 WPPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1111 ~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
...++|+|++|++.|.+...|..|+++|.+++
T Consensus 13 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~ 44 (74)
T 2lce_A 13 HSDKPYKCDRCQASFRYKGNLASHKTVHTGEK 44 (74)
T ss_dssp CCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCC
T ss_pred CCCCCeECCCCCceeCCHHHHHHHHHHcCCCC
Confidence 45689999999999999999999999999754
No 221
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=96.57 E-value=0.00059 Score=66.28 Aligned_cols=47 Identities=26% Similarity=0.607 Sum_probs=38.4
Q ss_pred cccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCc--cccccCccccchhHHhhcchh
Q 048174 1085 VKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSF--CRREFRSAQALGGHMNVHRRD 1141 (1303)
Q Consensus 1085 ~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~~ 1141 (1303)
...+|.|..|+ |...+.+ .++|.|++ |++.|.+...|..|+++|.++
T Consensus 31 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~----------~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~ 90 (124)
T 1ubd_C 31 GPRVHVCAECGKAFVESSKLKRHQLVHTG----------EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 90 (124)
T ss_dssp SCCCEECTTTCCEESSHHHHHHHGGGTSC----------CCCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred CCCCeECCCCCchhCCHHHHHHHHHHcCC----------CCCeeCCCCCCcCccCCHHHHHHHHHHhCCC
Confidence 56789999996 3343433 38899987 999999999999999999975
No 222
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=96.56 E-value=0.0006 Score=63.12 Aligned_cols=32 Identities=25% Similarity=0.654 Sum_probs=29.4
Q ss_pred CCCccccCccccccCccccchhHHhhcchhhh
Q 048174 1112 PPKNYNCSFCRREFRSAQALGGHMNVHRRDRA 1143 (1303)
Q Consensus 1112 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~ 1143 (1303)
..+||+|++|++.|.....|..|+++|++++.
T Consensus 22 ~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp 53 (88)
T 1x6f_A 22 QNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQ 53 (88)
T ss_dssp CCSCEECSSSCCEESSHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCC
Confidence 34899999999999999999999999999864
No 223
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=96.55 E-value=0.00038 Score=66.97 Aligned_cols=46 Identities=24% Similarity=0.660 Sum_probs=37.7
Q ss_pred cccccceecCCCc-----------cCCccCCCCCCCCcCCCCCcccc--CccccccCccccchhHHhhc
Q 048174 1083 EWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNC--SFCRREFRSAQALGGHMNVH 1138 (1303)
Q Consensus 1083 ~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c--~~c~~~f~~~~~l~~h~~~h 1138 (1303)
+..+.+|.|..|+ |...+.++ ++|.| +.|++.|.+..+|..|+++|
T Consensus 61 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----------~~~~C~~~~C~~~f~~~~~L~~H~~~H 119 (119)
T 2jp9_A 61 HTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGE----------KPFSCRWPSCQKKFARSDELVRHHNMH 119 (119)
T ss_dssp HHCCCCEECTTTCCEESCHHHHHHHHHHHHTC----------CCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred cCCCCCccCCccCchhCCHHHHHHHHHHhcCC----------CCeeCCCCCCccccCCHHHHHHHHhcC
Confidence 4567789999996 33334443 78999 89999999999999999998
No 224
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=96.53 E-value=0.00033 Score=73.67 Aligned_cols=29 Identities=28% Similarity=0.613 Sum_probs=23.2
Q ss_pred CCccccCccccccCccccchhHHhhcchh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRD 1141 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~ 1141 (1303)
.++|.|++|++.|.+...|..|+++|.++
T Consensus 131 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~ 159 (190)
T 2i13_A 131 EKPYKCPECGKSFSREDNLHTHQRTHTGE 159 (190)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHHHHHCC
T ss_pred CCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence 47788888888888888888888888764
No 225
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=96.48 E-value=0.12 Score=57.14 Aligned_cols=14 Identities=21% Similarity=0.624 Sum_probs=10.7
Q ss_pred CCccccCccccccC
Q 048174 1113 PKNYNCSFCRREFR 1126 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~ 1126 (1303)
.+...|+.|||=-.
T Consensus 220 ~~Iv~Cp~CgRIL~ 233 (256)
T 3na7_A 220 GDMITCPYCGRILY 233 (256)
T ss_dssp SSCEECTTTCCEEE
T ss_pred CCEEECCCCCeeEE
Confidence 36799999998544
No 226
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=96.46 E-value=0.00041 Score=62.33 Aligned_cols=27 Identities=30% Similarity=0.629 Sum_probs=23.1
Q ss_pred CccccCc--cccccCccccchhHHhhcch
Q 048174 1114 KNYNCSF--CRREFRSAQALGGHMNVHRR 1140 (1303)
Q Consensus 1114 ~~~~c~~--c~~~f~~~~~l~~h~~~h~~ 1140 (1303)
++|+|++ |++.|.+...|..|+++|++
T Consensus 30 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 58 (85)
T 2j7j_A 30 LPYECPHEGCDKRFSLPSRLKRHEKVHAG 58 (85)
T ss_dssp CCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred CCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence 7788888 88888888888888888886
No 227
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=96.45 E-value=0.026 Score=70.11 Aligned_cols=72 Identities=11% Similarity=0.034 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 929 KIENLSAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRLLYCMSEQFSQL 1000 (1303)
Q Consensus 929 ki~~L~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl~~le~El 1000 (1303)
.+..++...++++.+++..++..++.+++++.++++..++.+++++.+.....|++++..+..+++.++++.
T Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~~~~~~~l~~~~ 581 (597)
T 3oja_B 510 VFTHLKERQAFKLRETQARRTEADAKQKETEDLEQENIALEKQLDNKRAKQAELRQETSLKRQKVKQLEAKK 581 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhhhhhHHHHHHHHHhhhhhhcchhhHHhhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333444444444555555555555555555555555555555555555555555555555555555555433
No 228
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=96.44 E-value=0.34 Score=70.02 Aligned_cols=71 Identities=14% Similarity=0.116 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 932 NLSAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRLLYCMSEQFSQLKM 1002 (1303)
Q Consensus 932 ~L~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl~~le~El~~ 1002 (1303)
..+++++++++.++.++.+.++..++..+++.+.+....++..++..+..|-.|..+=.+.+..++.++..
T Consensus 2032 ~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~~~~kl~rA~~Li~gL~~Ek~RW~~~~~~l~~~~~~ 2102 (3245)
T 3vkg_A 2032 EIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLDNLNSERGRWEQQSENFNTQMST 2102 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccHHHHHHHHHHHHHh
Confidence 33334444444444444444444444444455555555566677777777777777777667666666554
No 229
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=96.43 E-value=0.0008 Score=58.27 Aligned_cols=45 Identities=27% Similarity=0.331 Sum_probs=39.7
Q ss_pred hhchhHHHHhhhhhhhhhhhhhhhh---hhHHHHHHhhccccceeccc
Q 048174 677 LLGHSAEVIQSQHRRRVTQKHYITL---VQAAVCIQSSCRGILARRYC 721 (1303)
Q Consensus 677 ~l~~aA~~IQ~~~R~~~~Rk~y~~~---r~aai~IQa~~Rg~laRk~~ 721 (1303)
.+..+++.||+..|||++|+.|.++ +.|+..||+.+|+|++++..
T Consensus 2 ~l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~w 49 (63)
T 2bl0_A 2 RIGEIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKNW 49 (63)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 3456789999999999999999998 78999999999999987643
No 230
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.42 E-value=0.0012 Score=58.49 Aligned_cols=32 Identities=22% Similarity=0.582 Sum_probs=28.8
Q ss_pred CCCCccccCccccccCccccchhHHhhcchhh
Q 048174 1111 WPPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1111 ~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
...++|+|++|++.|.+...|..||++|.+++
T Consensus 14 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~ 45 (77)
T 2cot_A 14 RERRRYKCDECGKSFSHSSDLSKHRRTHTGEK 45 (77)
T ss_dssp CCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSC
T ss_pred CCCCCEECCCCCcccCCHHHHHHHHHHcCCCc
Confidence 34689999999999999999999999999753
No 231
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=96.41 E-value=0.25 Score=71.33 Aligned_cols=74 Identities=12% Similarity=0.148 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 927 EEKIENLSAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRLLYCMSEQFSQL 1000 (1303)
Q Consensus 927 ~~ki~~L~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl~~le~El 1000 (1303)
.+++..++++.++.++.+.+.++++.+++.+++++++++++...+.+.++.+....+..+.+-+.=+..|..|.
T Consensus 2013 r~~l~~ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~~~~kl~rA~~Li~gL~~Ek 2086 (3245)
T 3vkg_A 2013 REEVEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLDNLNSER 2086 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 44555555555555555555555555555555555555555444444444444444444444443344444433
No 232
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=96.40 E-value=0.00079 Score=61.17 Aligned_cols=48 Identities=25% Similarity=0.546 Sum_probs=37.5
Q ss_pred cccceecCC--Cc-----------cCCccCCCCCCCCcCCCCCccccC--ccccccCccccchhHHhhcchhh
Q 048174 1085 VKEKWECEK--CS-----------CSEAQHGQSSCGLIVWPPKNYNCS--FCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1085 ~~~~~~c~~--c~-----------~~~~~~~~~~~~~~~~~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
..++|.|.. |+ |...+.+ .++|.|+ .|++.|.+...|..|+++|.+++
T Consensus 2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~----------~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~ 64 (89)
T 2wbs_A 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTG----------EKPYHCDWDGCGWKFARSDELTRHYRKHTGHR 64 (89)
T ss_dssp -CCCEECCSTTTCCEESSHHHHHHHHTTSCS----------SCCEECCSTTTCCEESSHHHHHHHHHHHHCCC
T ss_pred CCCCeeCCCCCCCCcCCCHHHHHHHHHhcCC----------CCCcCCCCCCCCCccCCHHHHHHHHHHcCCCC
Confidence 356899999 95 3333332 3789998 59999999999999999999753
No 233
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=96.34 E-value=0.36 Score=48.94 Aligned_cols=61 Identities=15% Similarity=0.220 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 929 KIENLSAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRL 989 (1303)
Q Consensus 929 ki~~L~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~L 989 (1303)
+-...+.++..|...+.+.+.+.+..++....+++.+.++...+......+..+++++...
T Consensus 71 rEd~yEeqIk~L~~kLKEAE~RAE~AERsv~kLEk~id~lEd~L~~~Kek~~~i~~eLd~t 131 (155)
T 2efr_A 71 KEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEEMKQL 131 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555555555555555555555555555555555555555445554444444443
No 234
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=96.30 E-value=0.49 Score=49.42 Aligned_cols=99 Identities=9% Similarity=0.074 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhhcchhhhhhccCCCccCcccCchhHHHHHHHHHHHHHHHH
Q 048174 862 CDITNKGIEVHVKECDTTDRAIEVYVKECDTKDRATEVHVEDCDDIDRAIEPHPITGKIPCSNEEEEKIENLSAEVEKLK 941 (1303)
Q Consensus 862 ~~kL~~~ve~Le~qlee~e~~~~~le~e~~~~~~~~~~~~ee~~~~k~~l~e~~~~~e~~~~~~~~~ki~~L~~E~~kLe 941 (1303)
-+.|+.+++.++++..++..+...+..+++.+..+......+ ....+..|++++..|+
T Consensus 44 E~ELE~eL~~~Ek~~~~L~~~~~~L~~E~e~~k~K~~~~~~e----------------------~~~~~~~Lq~el~~l~ 101 (189)
T 2v71_A 44 EAELEAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQYAQ----------------------SYKQVSVLEDDLSQTR 101 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHH
Confidence 356666677777777777776777766666444443332222 2233444444444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 942 ALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQL 982 (1303)
Q Consensus 942 ~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~L 982 (1303)
...+.+...+.++|..+..++.........+++.+.++++.
T Consensus 102 ~~~~~l~~~ireLEq~NDdlEr~~R~~~~SleD~e~kln~a 142 (189)
T 2v71_A 102 AIKEQLHKYVRELEQANDDLERAKRATIMSLEDFEQRLNQA 142 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHHHHHH
Confidence 44444444444444444444444444444444444444333
No 235
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.28 E-value=0.00083 Score=64.44 Aligned_cols=53 Identities=11% Similarity=0.193 Sum_probs=37.0
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCC-ccccCcccccc--CccccchhHHhhcchhh
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPK-NYNCSFCRREF--RSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~-~~~c~~c~~~f--~~~~~l~~h~~~h~~~~ 1142 (1303)
.+..+.+|+|..|+ |... .+. ...+ .|.|++|++.| .+...|..|+++|++++
T Consensus 13 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-~~h-------~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~ 79 (115)
T 2dmi_A 13 IFTGASKFRCKDCSAAYDTLVELTVHMNE-TGH-------YRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQK 79 (115)
T ss_dssp CCCCCCSEEBSSSSCEESSHHHHHHHHHH-TCC-------CBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCS
T ss_pred eeCCCCCEECCccCchhcCHHHHHHHHHH-hCc-------cccCCCccCCCCCcccccccHHHHHHHhhccCCCc
Confidence 35667889999996 2222 111 1123 45699999999 89999999999998763
No 236
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=96.28 E-value=0.094 Score=58.13 Aligned_cols=12 Identities=17% Similarity=0.443 Sum_probs=8.7
Q ss_pred cccceecCCCcc
Q 048174 1085 VKEKWECEKCSC 1096 (1303)
Q Consensus 1085 ~~~~~~c~~c~~ 1096 (1303)
..+...|+.||.
T Consensus 219 ~~~Iv~Cp~CgR 230 (256)
T 3na7_A 219 SGDMITCPYCGR 230 (256)
T ss_dssp SSSCEECTTTCC
T ss_pred CCCEEECCCCCe
Confidence 345689999973
No 237
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=96.27 E-value=0.00086 Score=55.61 Aligned_cols=27 Identities=22% Similarity=0.472 Sum_probs=25.7
Q ss_pred ccccCccccccCccccchhHHhhcchh
Q 048174 1115 NYNCSFCRREFRSAQALGGHMNVHRRD 1141 (1303)
Q Consensus 1115 ~~~c~~c~~~f~~~~~l~~h~~~h~~~ 1141 (1303)
||+|++|++.|.+...|..|+++|.++
T Consensus 1 p~~C~~C~~~f~~~~~l~~H~~~h~~~ 27 (57)
T 1bbo_A 1 KYICEECGIRXKKPSMLKKHIRTHTDV 27 (57)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred CCcCCCCcCcCCCHHHHHHHHHhcCCC
Confidence 699999999999999999999999975
No 238
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=96.26 E-value=0.0051 Score=78.84 Aligned_cols=47 Identities=26% Similarity=0.150 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHH---hhhhHHhhhhhhhHHHHHHHHHHH
Q 048174 781 AKGALSIQTSWRGHRDFSYYKRL---RKASVFSQSRWRGIAARREFRKLK 827 (1303)
Q Consensus 781 ~~AA~~IQ~~~Rg~~aRr~~~~~---~kaav~IQ~~~R~~~aRkel~~lk 827 (1303)
..+++.||++||||++|+.|+++ +.|+++||+.||++++++.+..+|
T Consensus 779 ~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~~w~~ 828 (837)
T 1kk8_A 779 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQWWK 828 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHHH
Confidence 44666677777777777777665 456677777777777766655444
No 239
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.25 E-value=0.00058 Score=64.75 Aligned_cols=60 Identities=15% Similarity=0.184 Sum_probs=39.1
Q ss_pred ccccccceecCCCccCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcchhhh
Q 048174 1082 MEWVKEKWECEKCSCSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRDRA 1143 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~ 1143 (1303)
.+..+++|+|..|+..-..... ...-...-.++|+|++|++.|.+...|..|++ |++++.
T Consensus 10 ~h~~~~~~~C~~C~~~f~~~~~-l~~H~~~H~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~ 69 (107)
T 1wjp_A 10 PVENKEVYQCRLCNAKLSSLLE-QGSHERLCRNAAVCPYCSLRFFSPELKQEHES-KCEYKK 69 (107)
T ss_dssp CCCCCCCCBCTTTCCBCSSHHH-HHHHHHHHHHSBCCTTTCCCBSSHHHHHHHHH-HCSTGG
T ss_pred ccCCCcCeECCCCCCccCCHHH-HHHHHHHCCCCccCCCCCCccCCHHHHHHHHH-cCCCCC
Confidence 4567789999999632110000 00000000268999999999999999999996 998753
No 240
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=96.21 E-value=0.0009 Score=57.23 Aligned_cols=44 Identities=16% Similarity=0.391 Sum_probs=31.6
Q ss_pred ccccccceecCCCccC--------CccCCCCCCCCcCCCCCccccCccccccCccccchhHH
Q 048174 1082 MEWVKEKWECEKCSCS--------EAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHM 1135 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~~~--------~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~ 1135 (1303)
.+.++.+|.|..|+.. ..+.+ .+||.|++||+.|.....++-|+
T Consensus 8 ~H~~~k~~~C~~C~k~F~~~~~l~~~H~~----------~k~~~C~~C~k~f~~~~~~~~~~ 59 (62)
T 1vd4_A 8 DSTNRASFKCPVCSSTFTDLEANQLFDPM----------TGTFRCTFCHTEVEEDESAMPKK 59 (62)
T ss_dssp SCCSSSEEECSSSCCEEEHHHHHHHEETT----------TTEEBCSSSCCBCEECTTCSCCC
T ss_pred HcCCCCCccCCCCCchhccHHHhHhhcCC----------CCCEECCCCCCccccCccccccc
Confidence 4567788999999632 12222 47899999999999888877553
No 241
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.13 E-value=0.0011 Score=58.97 Aligned_cols=30 Identities=20% Similarity=0.382 Sum_probs=27.7
Q ss_pred CCCccccCccccccCccccchhHHhhcchh
Q 048174 1112 PPKNYNCSFCRREFRSAQALGGHMNVHRRD 1141 (1303)
Q Consensus 1112 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~ 1141 (1303)
..|||+|.+|++.|.+...|..||++|.++
T Consensus 4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~ 33 (78)
T 2d9h_A 4 GSSGLQCEICGFTCRQKASLNWHQRKHAET 33 (78)
T ss_dssp SCCCEECSSSCCEESSHHHHHHHHHHHHHH
T ss_pred CCcCeECCCCCCeeCCHHHHHHHHHHhhcc
Confidence 358999999999999999999999999974
No 242
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=96.08 E-value=0.0015 Score=66.01 Aligned_cols=30 Identities=27% Similarity=0.640 Sum_probs=26.6
Q ss_pred CCccccCc--cccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSF--CRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~--c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.++|.|++ |++.|.+...|..|+++|++++
T Consensus 88 ~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~ 119 (155)
T 2rpc_A 88 EKPFPCPFPGCGKIFARSENLKIHKRTHTGEK 119 (155)
T ss_dssp CCSEECSCTTTCCEESCHHHHHHHHTTTCSSC
T ss_pred CCcccCCcCCCCCccCCHHHHHHHHHhhCCCC
Confidence 37899998 9999999999999999998753
No 243
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=95.95 E-value=1.3 Score=44.91 Aligned_cols=56 Identities=20% Similarity=0.207 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 934 SAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRL 989 (1303)
Q Consensus 934 ~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~L 989 (1303)
+..+.+|+..+++++..+...+.++..+.+++......+......+..|..++.+|
T Consensus 97 ERsv~kLEk~id~lEd~L~~~Kek~~~i~~eLd~tl~el~~~~~~~~~~~~~~~~~ 152 (155)
T 2efr_A 97 ERSVTKLEKSIDDLEDELYAQKLKYKAISEEMKQLEDKVEELLSKNYHLENEVARL 152 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHh
Confidence 33444444444555545544444455555555544445555555555555555444
No 244
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=95.92 E-value=0.0027 Score=55.46 Aligned_cols=33 Identities=18% Similarity=0.398 Sum_probs=29.4
Q ss_pred CCCCCccccCc--cccccCccccchhHHhhcchhh
Q 048174 1110 VWPPKNYNCSF--CRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1110 ~~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
....++|.|.+ |++.|.+...|..|+++|++++
T Consensus 12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~ 46 (72)
T 2epa_A 12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEK 46 (72)
T ss_dssp CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSC
T ss_pred ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCC
Confidence 44568999999 9999999999999999999764
No 245
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=95.92 E-value=0.0014 Score=59.87 Aligned_cols=29 Identities=28% Similarity=0.682 Sum_probs=27.1
Q ss_pred CCccccCccccccCccccchhHHhhcchh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRD 1141 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~ 1141 (1303)
.|||.|++|++.|.+..+|..|+++|.++
T Consensus 1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~ 29 (88)
T 1llm_C 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGE 29 (88)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHHHHHCC
T ss_pred CCCCcCCCCCCccCCHHHHHHHHHHcCCC
Confidence 37999999999999999999999999875
No 246
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=95.85 E-value=0.0014 Score=56.10 Aligned_cols=29 Identities=24% Similarity=0.564 Sum_probs=26.0
Q ss_pred CCccccCccccccCccccchhHHhh-c-chh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNV-H-RRD 1141 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~-h-~~~ 1141 (1303)
.+||.|++|++.|.+..+|..|++. | +++
T Consensus 8 ~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~ 38 (66)
T 2drp_A 8 EHTYRCKVCSRVYTHISNFCRHYVTSHKRNV 38 (66)
T ss_dssp TTEEECTTTCCEESSHHHHHHHHHHHSSSSC
T ss_pred CcceECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence 4899999999999999999999998 7 443
No 247
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=95.84 E-value=0.7 Score=47.19 Aligned_cols=10 Identities=40% Similarity=0.335 Sum_probs=3.6
Q ss_pred HHHHHHHHHH
Q 048174 981 QLQDSLNRLL 990 (1303)
Q Consensus 981 ~Lq~el~~Le 990 (1303)
+|++.+..|+
T Consensus 122 ~L~Ekl~~lE 131 (168)
T 3o0z_A 122 EAQDMLNHSE 131 (168)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 248
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=95.80 E-value=0.0026 Score=66.72 Aligned_cols=27 Identities=30% Similarity=0.629 Sum_probs=21.2
Q ss_pred CccccCc--cccccCccccchhHHhhcch
Q 048174 1114 KNYNCSF--CRREFRSAQALGGHMNVHRR 1140 (1303)
Q Consensus 1114 ~~~~c~~--c~~~f~~~~~l~~h~~~h~~ 1140 (1303)
+||+|++ |++.|.+...|..|+++|++
T Consensus 133 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~ 161 (190)
T 1tf6_A 133 LPYECPHEGCDKRFSLPSRLKRHEKVHAG 161 (190)
T ss_dssp CSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred CCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence 6788877 88888888888888888775
No 249
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=95.78 E-value=0.6 Score=46.12 Aligned_cols=42 Identities=19% Similarity=0.124 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 960 EARVLSEKRLKKLEETERRVYQLQDSLNRLLYCMSEQFSQLK 1001 (1303)
Q Consensus 960 e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl~~le~El~ 1001 (1303)
+++..+.++..++++.+..+..|......|+..+..|+.++.
T Consensus 80 eLe~~l~el~~rleeeee~~~~L~~~kkkle~e~~~Lk~~le 121 (129)
T 2fxo_A 80 QLEAKVKEMNKRLEDEEEMNAELTAKKRKLEDECSELKRDID 121 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334444445555555555555555555555555555544
No 250
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.77 E-value=0.0024 Score=59.79 Aligned_cols=31 Identities=23% Similarity=0.359 Sum_probs=28.4
Q ss_pred CCCccccCccccccC-ccccchhHHhhcch-hh
Q 048174 1112 PPKNYNCSFCRREFR-SAQALGGHMNVHRR-DR 1142 (1303)
Q Consensus 1112 ~~~~~~c~~c~~~f~-~~~~l~~h~~~h~~-~~ 1142 (1303)
..++|.|++|++.|. +...|..||++|.+ ++
T Consensus 21 ~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~ 53 (98)
T 2gqj_A 21 ERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQD 53 (98)
T ss_dssp TTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHH
T ss_pred cCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCC
Confidence 358999999999999 99999999999998 54
No 251
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=95.74 E-value=0.1 Score=64.72 Aligned_cols=73 Identities=12% Similarity=0.050 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 929 KIENLSAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRLLYCMSEQFSQLK 1001 (1303)
Q Consensus 929 ki~~L~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl~~le~El~ 1001 (1303)
..+.++++..++++..+.++.++...+++..+.+++++.+.++.++.|.+....++.+.++++++.++..+++
T Consensus 503 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~~~~~~ 575 (597)
T 3oja_B 503 SSDNLNKVFTHLKERQAFKLRETQARRTEADAKQKETEDLEQENIALEKQLDNKRAKQAELRQETSLKRQKVK 575 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhhcchhhHHhhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Confidence 3456777777788888888777777777777777777777788888888888888888888888888887777
No 252
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=95.70 E-value=0.0023 Score=59.35 Aligned_cols=50 Identities=22% Similarity=0.460 Sum_probs=38.5
Q ss_pred cccccceecCC--Cc-----------cCCccCCCCCCCCcCCCCCccccC--ccccccCccccchhHHhhcchhh
Q 048174 1083 EWVKEKWECEK--CS-----------CSEAQHGQSSCGLIVWPPKNYNCS--FCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1083 ~~~~~~~~c~~--c~-----------~~~~~~~~~~~~~~~~~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
...+++|.|.- |+ |...+.+ .++|+|+ .|++.|.+...|..|+++|.+++
T Consensus 10 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~----------~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~ 74 (100)
T 2ebt_A 10 LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTG----------EKPYKCTWEGCDWRFARSDELTRHYRKHTGAK 74 (100)
T ss_dssp CCSCCCEECCSSSCCCEESCHHHHHHHHHHHSC----------CCCEECCSSSCCCEESSHHHHHHHHHHHTSCC
T ss_pred cccCcceEcCCCCCCCcccCHHHHHHHHHHhCC----------CCCeeCCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence 34567899995 85 3333333 3789997 59999999999999999999753
No 253
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.68 E-value=0.0031 Score=55.84 Aligned_cols=29 Identities=24% Similarity=0.588 Sum_probs=26.2
Q ss_pred CCccccCccccccCccccchhHHh-hcchh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMN-VHRRD 1141 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~-~h~~~ 1141 (1303)
.|||+|++|++.|.+...|..|++ .|.++
T Consensus 13 ~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~ 42 (77)
T 2ct1_A 13 EKPYECYICHARFTQSGTMKMHILQKHTEN 42 (77)
T ss_dssp CCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred CCCeECCCcCchhCCHHHHHHHHHHhcCCC
Confidence 489999999999999999999997 78753
No 254
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.66 E-value=0.003 Score=63.64 Aligned_cols=28 Identities=29% Similarity=0.653 Sum_probs=16.7
Q ss_pred CccccCc--cccccCccccchhHH-hhcchh
Q 048174 1114 KNYNCSF--CRREFRSAQALGGHM-NVHRRD 1141 (1303)
Q Consensus 1114 ~~~~c~~--c~~~f~~~~~l~~h~-~~h~~~ 1141 (1303)
++|.|++ |++.|.+...|..|+ ++|.++
T Consensus 96 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~ 126 (155)
T 2gli_A 96 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE 126 (155)
T ss_dssp CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred CCeeCCCCCCCCccCCHHHHHHHHHHhcCCC
Confidence 4566665 666666666666665 556555
No 255
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.64 E-value=0.0021 Score=60.25 Aligned_cols=29 Identities=17% Similarity=0.382 Sum_probs=26.6
Q ss_pred CCccccCcccccc-CccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREF-RSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f-~~~~~l~~h~~~h~~~~ 1142 (1303)
.++|+|++|++.| .+...|..||++| +++
T Consensus 32 ~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k 61 (96)
T 2ctd_A 32 KGSVSCPTCQAVGRKTIEGLKKHMENC-KQE 61 (96)
T ss_dssp TSCEECTTTCSCEESSHHHHHHHHHHH-CCC
T ss_pred CCCcCCCCCCCCcccCHHHHHHHHHHH-CCC
Confidence 4789999999999 9999999999999 763
No 256
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.39 E-value=0.0042 Score=62.54 Aligned_cols=28 Identities=21% Similarity=0.599 Sum_probs=20.4
Q ss_pred CCccccCc--cccccCccccchhHHhhcch
Q 048174 1113 PKNYNCSF--CRREFRSAQALGGHMNVHRR 1140 (1303)
Q Consensus 1113 ~~~~~c~~--c~~~f~~~~~l~~h~~~h~~ 1140 (1303)
.++|.|++ |++.|.+..+|..|+++|.|
T Consensus 126 ~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg 155 (155)
T 2gli_A 126 EKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155 (155)
T ss_dssp CCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred CCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence 36777777 77777777777777777753
No 257
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=95.31 E-value=0.0042 Score=54.25 Aligned_cols=32 Identities=25% Similarity=0.599 Sum_probs=28.2
Q ss_pred CCCCccccC--ccccccCccccchhHHhhcchhh
Q 048174 1111 WPPKNYNCS--FCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1111 ~~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
...++|+|+ .|++.|.+...|..|+++|.+++
T Consensus 15 ~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~ 48 (73)
T 1f2i_G 15 PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQK 48 (73)
T ss_dssp CCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCC
T ss_pred CCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCC
Confidence 356899998 59999999999999999999753
No 258
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=95.24 E-value=0.0076 Score=48.18 Aligned_cols=33 Identities=21% Similarity=0.396 Sum_probs=25.7
Q ss_pred cccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcccc
Q 048174 1081 SMEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRR 1123 (1303)
Q Consensus 1081 ~~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~ 1123 (1303)
+.+..+.+|.|..|+ |...+.++ +||+|++|+|
T Consensus 5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------k~~~C~~C~k 48 (48)
T 2epr_A 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGE----------KPYSSGPSSG 48 (48)
T ss_dssp SCCCCCCSEEETTTTEEESSHHHHHHHGGGSCSC----------CCCCSCCCCC
T ss_pred CCCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCC----------CCccCCCCCC
Confidence 445678899999995 55555544 8999999997
No 259
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=95.23 E-value=0.14 Score=51.36 Aligned_cols=54 Identities=11% Similarity=0.047 Sum_probs=36.8
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhHHHHHHHHH
Q 048174 735 KNSRTMMTRKAYSNVKAAAIVLQAWLRARAAVRAMAALSELRHRKHAKGALSIQTSWRGHRDFSYYKR 802 (1303)
Q Consensus 735 ~~~Rg~~aRr~~~k~r~aai~IQ~~~R~~~~~R~~~arr~~~~~~~~~AA~~IQ~~~Rg~~aRr~~~~ 802 (1303)
..+..|+.+.+|.+...+++.+=. .......| ..+++.||+.+|||++|+.|+-
T Consensus 13 ~kV~~WLi~sRWrK~q~~~lsvIK------LknKI~yR--------~~~~i~iQktvR~~L~rkkhkP 66 (148)
T 3gn4_A 13 KRVNHWLICSRWKKVQWCSLSVIK------LKNKIKYR--------AEACIKMQKTIRMWLCKRRHKP 66 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHH--------HHHHHHHHHHHHHHHHHHhhhh
Confidence 457789999998887765544333 11122222 3489999999999999998754
No 260
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=95.03 E-value=0.0039 Score=65.33 Aligned_cols=27 Identities=30% Similarity=0.535 Sum_probs=15.3
Q ss_pred Ccccc--CccccccCccccchhHHhhcch
Q 048174 1114 KNYNC--SFCRREFRSAQALGGHMNVHRR 1140 (1303)
Q Consensus 1114 ~~~~c--~~c~~~f~~~~~l~~h~~~h~~ 1140 (1303)
++|.| ++|++.|.+..+|..|+++|.+
T Consensus 41 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 69 (190)
T 1tf6_A 41 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG 69 (190)
T ss_dssp CSSCCSSTTCCCCCSSHHHHHHHHTTTTT
T ss_pred CCccCCCCCCChhhCCHHHHHHHHHHccC
Confidence 45555 5555555555555555555554
No 261
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=94.99 E-value=0.35 Score=44.65 Aligned_cols=76 Identities=12% Similarity=0.122 Sum_probs=69.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 925 EEEEKIENLSAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRLLYCMSEQFSQL 1000 (1303)
Q Consensus 925 ~~~~ki~~L~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl~~le~El 1000 (1303)
...+.+..+..++.+|+..++..+....+++.++..+..+..++...+.+.+.++..|......|+.++.++++.+
T Consensus 11 ~~eeEm~~~eeel~~lke~l~k~e~~rkele~~~~~l~~ek~~L~~ql~eaEe~~~~L~~~K~eLE~~l~el~~rl 86 (89)
T 3bas_A 11 RQEEEMKEQLKQMDKMKEDLAKTERIKKELEEQNVTLLEQKNDLFGSMKQLEDKVEELLSKNYHLENEVARLKKLV 86 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4578888899999999999999999999999999999999999888899999999999999999999999998765
No 262
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.97 E-value=0.0039 Score=55.67 Aligned_cols=49 Identities=20% Similarity=0.304 Sum_probs=38.4
Q ss_pred ccccccceecCCCccCC---------ccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcchh
Q 048174 1082 MEWVKEKWECEKCSCSE---------AQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRD 1141 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~~~~---------~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~ 1141 (1303)
.+...+++.|..|+..- .+. +.+||.|+.|++.|. ...|..|+++|.++
T Consensus 11 ~~c~~r~~~C~~C~~~~~~~~L~~H~~~c----------~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~ 68 (75)
T 2d9k_A 11 TECPLRLAVCQHCDLELSILKLKEHEDYC----------GARTELCGNCGRNVL-VKDLKTHPEVCGRE 68 (75)
T ss_dssp CCCCCCCEECSSSCCEECHHHHHHHHHHH----------HHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred ccCCCcccCCcccChHhhHHHHHHHHhHc----------CCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence 34667899999995221 222 348999999999988 59999999999986
No 263
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.94 E-value=0.0075 Score=54.14 Aligned_cols=29 Identities=34% Similarity=0.622 Sum_probs=26.4
Q ss_pred CCccccCccccccCccccchhHHhhcchh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRD 1141 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~ 1141 (1303)
.+||.|++|++.|.+...|..|+++|..+
T Consensus 13 ~k~~~C~~C~~~f~~~~~l~~H~~~~~~~ 41 (86)
T 1x6h_A 13 EKPYACSHCDKTFRQKQLLDMHFKRYHDP 41 (86)
T ss_dssp CCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred CCCCcCCCCCCccCCHHHHHHHHHHhcCC
Confidence 48999999999999999999999987753
No 264
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.87 E-value=0.006 Score=58.01 Aligned_cols=29 Identities=17% Similarity=0.431 Sum_probs=26.0
Q ss_pred CCCccccCccccccCccccchhHHh-hcch
Q 048174 1112 PPKNYNCSFCRREFRSAQALGGHMN-VHRR 1140 (1303)
Q Consensus 1112 ~~~~~~c~~c~~~f~~~~~l~~h~~-~h~~ 1140 (1303)
+.+||+|++||+.|.+...|..||+ +|++
T Consensus 15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~ 44 (102)
T 2ghf_A 15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPN 44 (102)
T ss_dssp CCSSEECSSCSCEESCHHHHHHHHHHHCSS
T ss_pred CCcCcCCCCCCCccCCHHHHHHHHHhhCCC
Confidence 4589999999999999999999998 5953
No 265
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=94.74 E-value=1.5 Score=44.17 Aligned_cols=33 Identities=21% Similarity=0.065 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 048174 973 EETERRVYQLQDSLNRLLYCMSEQFSQLKMILRS 1006 (1303)
Q Consensus 973 ~e~E~~~~~Lq~el~~Le~kl~~le~El~~~l~q 1006 (1303)
...|.++.+|+.++..-+..+..++.++. -|+.
T Consensus 111 ~~~e~r~~~L~~ql~e~~~~l~~lq~ql~-~LK~ 143 (154)
T 2ocy_A 111 YAIEILNKRLTEQLREKDTLLDTLTLQLK-NLKK 143 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 33455555555555555555556665555 4443
No 266
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.53 E-value=0.0067 Score=52.13 Aligned_cols=29 Identities=17% Similarity=0.426 Sum_probs=25.8
Q ss_pred CCCccccCccccccCccccchhHHhhcchhh
Q 048174 1112 PPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1112 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
+.|||.|++|++.|. ...|..|+++ ++++
T Consensus 7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~ 35 (66)
T 2eod_A 7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRL 35 (66)
T ss_dssp CCCEEECSSSCCEEE-HHHHHHHHHH-CSSS
T ss_pred CCCCeeccccCCccC-HHHHHHHHHH-cCCc
Confidence 568999999999999 9999999998 6653
No 267
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=94.53 E-value=0.28 Score=48.98 Aligned_cols=68 Identities=10% Similarity=0.125 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 934 SAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRLLYCMSEQFSQLK 1001 (1303)
Q Consensus 934 ~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl~~le~El~ 1001 (1303)
..|..+++.+.+.++..++++++++..++.++.....++++.+..+..|++++..|+.++..|+.++.
T Consensus 67 adEl~k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~le~~~~ 134 (138)
T 3hnw_A 67 ADDYFKAKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKLETELN 134 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34666777777777777777788888888888888888888888888888888888888888888776
No 268
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=94.52 E-value=0.0066 Score=51.75 Aligned_cols=27 Identities=15% Similarity=0.354 Sum_probs=23.4
Q ss_pred CCccccCccccccCccccchhHHhhcchhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+||+|+.||+.|....+|. ++|++++
T Consensus 12 ~k~~~C~~C~k~F~~~~~l~---~~H~~~k 38 (62)
T 1vd4_A 12 RASFKCPVCSSTFTDLEANQ---LFDPMTG 38 (62)
T ss_dssp SSEEECSSSCCEEEHHHHHH---HEETTTT
T ss_pred CCCccCCCCCchhccHHHhH---hhcCCCC
Confidence 38999999999999988775 8998864
No 269
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=94.29 E-value=1.3 Score=41.70 Aligned_cols=29 Identities=14% Similarity=0.060 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 966 EKRLKKLEETERRVYQLQDSLNRLLYCMS 994 (1303)
Q Consensus 966 ~~l~~kl~e~E~~~~~Lq~el~~Le~kl~ 994 (1303)
.....++++.+........++..|.-++.
T Consensus 68 ~ea~~kLee~ek~~~~aE~ev~~L~Rriq 96 (101)
T 3u1c_A 68 HKSEDSLLFAEENAAKAESEVASLNRRIQ 96 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333334444433333
No 270
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=94.07 E-value=0.032 Score=57.83 Aligned_cols=28 Identities=18% Similarity=0.329 Sum_probs=25.3
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHHHHHH
Q 048174 92 KSNSILVSGESGAGKTETTKMIMRYLAY 119 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~yLa~ 119 (1303)
..+.|+|.|++|+|||+.++.|...+..
T Consensus 37 ~g~~~~l~G~~G~GKTtL~~~i~~~~~~ 64 (180)
T 3ec2_A 37 EGKGLTFVGSPGVGKTHLAVATLKAIYE 64 (180)
T ss_dssp GCCEEEECCSSSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999998864
No 271
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=94.03 E-value=0.063 Score=53.73 Aligned_cols=63 Identities=11% Similarity=0.140 Sum_probs=45.1
Q ss_pred HhhhhhhhhhhhhhhhhhhHHHHHHhhccccceeccccccchhhhHHHHHHHHHHHHHHHhhcchhHHHHH
Q 048174 685 IQSQHRRRVTQKHYITLVQAAVCIQSSCRGILARRYCKVKKKEAAAVKIQKNSRTMMTRKAYSNVKAAAIV 755 (1303)
Q Consensus 685 IQ~~~R~~~~Rk~y~~~r~aai~IQa~~Rg~laRk~~~~~r~~~AAi~IQ~~~Rg~~aRr~~~k~r~aai~ 755 (1303)
+-+.+..|+.|.+|.+...+++.+=..-... ..+..|+++||+.+|||++|++|+....+...
T Consensus 11 Lv~kV~~WLi~sRWrK~q~~~lsvIKLknKI--------~yR~~~~i~iQktvR~~L~rkkhkPRi~g~~k 73 (148)
T 3gn4_A 11 LVKRVNHWLICSRWKKVQWCSLSVIKLKNKI--------KYRAEACIKMQKTIRMWLCKRRHKPRIDGLVK 73 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 3456788999999999888776655432221 22347899999999999999998765444333
No 272
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=93.96 E-value=1.2 Score=42.41 Aligned_cols=79 Identities=10% Similarity=0.043 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhhcchhhhhhccCCCccCcccCchhHHHHHHHHHHHHHH
Q 048174 860 KECDITNKGIEVHVKECDTTDRAIEVYVKECDTKDRATEVHVEDCDDIDRAIEPHPITGKIPCSNEEEEKIENLSAEVEK 939 (1303)
Q Consensus 860 ~E~~kL~~~ve~Le~qlee~e~~~~~le~e~~~~~~~~~~~~ee~~~~k~~l~e~~~~~e~~~~~~~~~ki~~L~~E~~k 939 (1303)
.+.++|+.++.+++.+|+.+.....+++.. +..+.++-..++..
T Consensus 6 ~~~~~lq~~~~ql~~qL~k~~~~r~~Le~~------------------------------------w~~k~E~~k~qV~~ 49 (112)
T 1x79_B 6 DQVKKLQLMLRQANDQLEKTMKDKQELEDF------------------------------------IKQSSEDSSHQISA 49 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------------HHHHHHHHHHHHHH
Confidence 345667777777777777666555555433 44555555667777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 940 LKALLQAEKQRADDSARKCAEARVLSEKRLKKLEE 974 (1303)
Q Consensus 940 Le~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e 974 (1303)
|...++..+..+.++.+.+...+....+.+.+|..
T Consensus 50 L~~~~q~sE~~L~~Lqq~fsq~q~~vq~qL~~Lt~ 84 (112)
T 1x79_B 50 LVLRAQASEILLEELQQGLSQAKRDVQEQMAVLMQ 84 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777777777777766665554444433
No 273
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=93.90 E-value=0.074 Score=65.73 Aligned_cols=71 Identities=13% Similarity=0.121 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 931 ENLSAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRLLYCMSEQFSQLK 1001 (1303)
Q Consensus 931 ~~L~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl~~le~El~ 1001 (1303)
.+++.++..|+......++.-..++.++.+.+.....+.+..+..+.+..+|+.++..-++...+.++++.
T Consensus 387 ~~~e~~~~~l~~~~~~~~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~a~~~~~~~~~~l~ 457 (575)
T 2i1j_A 387 NELQAMMQRLEETKNMEAAERQKLEDEIRAKQEEVSRIQQEVELKDSETRRLQEEVEDARRKQDEAAAALL 457 (575)
T ss_dssp -------------------------------------------------------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555544444445555666666666666666666666666777888888887777766666666
No 274
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}
Probab=93.67 E-value=0.036 Score=39.29 Aligned_cols=22 Identities=27% Similarity=0.475 Sum_probs=18.4
Q ss_pred cchhhhHHHHHHHHHHHHHHHh
Q 048174 724 KKKEAAAVKIQKNSRTMMTRKA 745 (1303)
Q Consensus 724 ~r~~~AAi~IQ~~~Rg~~aRr~ 745 (1303)
.+++.||++||+.||+|+.++.
T Consensus 3 k~Ee~aA~vIQrA~R~yl~~~~ 24 (27)
T 2kxw_B 3 KQEEVSAIVIQRAYRRYLLKQK 24 (27)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 3466899999999999998865
No 275
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=93.61 E-value=0.011 Score=52.71 Aligned_cols=44 Identities=18% Similarity=0.345 Sum_probs=34.5
Q ss_pred cccccceecCC--Ccc-----------CCccCCCCCCCCcCCCCCccccCc---cccccCccccchhHHhhcc
Q 048174 1083 EWVKEKWECEK--CSC-----------SEAQHGQSSCGLIVWPPKNYNCSF---CRREFRSAQALGGHMNVHR 1139 (1303)
Q Consensus 1083 ~~~~~~~~c~~--c~~-----------~~~~~~~~~~~~~~~~~~~~~c~~---c~~~f~~~~~l~~h~~~h~ 1139 (1303)
+..+.+|+|.. |+. ...+.+ |.|++ |++.|.+...|..|+++|.
T Consensus 26 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-------------~~C~~~~~C~~~f~~~~~l~~H~~~hh 85 (85)
T 2j7j_A 26 HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG-------------YPCKKDDSCSFVGKTWTLYLKHVAECH 85 (85)
T ss_dssp HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS-------------EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred hCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC-------------CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence 45677899988 962 222211 99999 9999999999999999984
No 276
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=93.43 E-value=0.017 Score=56.34 Aligned_cols=26 Identities=23% Similarity=0.528 Sum_probs=25.1
Q ss_pred CCccccCccccccCccccchhHHhhc
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVH 1138 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h 1138 (1303)
.|||.|++||+.|.+...|..|+++|
T Consensus 72 ~~~~~C~~C~k~f~~~~~l~~H~~~H 97 (129)
T 2wbt_A 72 ISQFVCPLCLMPFSSSVSLKQHIRYT 97 (129)
T ss_dssp HCSEECTTTCCEESSHHHHHHHHHHT
T ss_pred CCCeECCCCCcccCCHhHHHHHHHHC
Confidence 48999999999999999999999999
No 277
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=93.33 E-value=3.5 Score=41.63 Aligned_cols=46 Identities=17% Similarity=0.218 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 951 ADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRLLYCMSEQ 996 (1303)
Q Consensus 951 ~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl~~l 996 (1303)
+.+..++...++.....+.+.+.+.+..+..|+.++..|+.-+..+
T Consensus 103 Va~ar~~~~~~e~r~~~L~~ql~e~~~~l~~lq~ql~~LK~v~~~m 148 (154)
T 2ocy_A 103 VADARKEKYAIEILNKRLTEQLREKDTLLDTLTLQLKNLKKVMHSL 148 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444555566666666777777777777777777776554433
No 278
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=93.32 E-value=0.057 Score=57.08 Aligned_cols=30 Identities=30% Similarity=0.358 Sum_probs=27.0
Q ss_pred HcCCCeEEEEeCCcCCCchhhHHHHHHHHH
Q 048174 89 NEGKSNSILVSGESGAGKTETTKMIMRYLA 118 (1303)
Q Consensus 89 ~~~~~QsIiisGESGaGKTe~~k~i~~yLa 118 (1303)
.......|+|.|.||||||+.++.+...|.
T Consensus 21 ~~~~g~~i~l~G~sGsGKSTl~~~La~~l~ 50 (200)
T 3uie_A 21 LDQKGCVIWVTGLSGSGKSTLACALNQMLY 50 (200)
T ss_dssp HTSCCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 456678999999999999999999999986
No 279
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=93.32 E-value=0.035 Score=59.16 Aligned_cols=30 Identities=20% Similarity=0.335 Sum_probs=27.0
Q ss_pred cCCCeEEEEeCCcCCCchhhHHHHHHHHHH
Q 048174 90 EGKSNSILVSGESGAGKTETTKMIMRYLAY 119 (1303)
Q Consensus 90 ~~~~QsIiisGESGaGKTe~~k~i~~yLa~ 119 (1303)
.+..+.|.|.|.||||||+.++.|...+..
T Consensus 19 ~~~g~~v~I~G~sGsGKSTl~~~l~~~~~~ 48 (208)
T 3c8u_A 19 QPGRQLVALSGAPGSGKSTLSNPLAAALSA 48 (208)
T ss_dssp CCSCEEEEEECCTTSCTHHHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHHhh
Confidence 456789999999999999999999999874
No 280
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=93.28 E-value=4.6 Score=38.54 Aligned_cols=62 Identities=23% Similarity=0.235 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 927 EEKIENLSAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNR 988 (1303)
Q Consensus 927 ~~ki~~L~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~ 988 (1303)
.+.+..|...+..|+..+-+++..++++|+........+++...++..+-.++.-|+.++..
T Consensus 41 q~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k~n~aiErnalLE~El~E 102 (111)
T 2v66_B 41 EDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDE 102 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556667777777788888888888888888888888888888888888888888887763
No 281
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=93.20 E-value=0.024 Score=49.99 Aligned_cols=30 Identities=30% Similarity=0.548 Sum_probs=26.8
Q ss_pred CCCccccCc--cccccCccccchhHHh-hcchh
Q 048174 1112 PPKNYNCSF--CRREFRSAQALGGHMN-VHRRD 1141 (1303)
Q Consensus 1112 ~~~~~~c~~--c~~~f~~~~~l~~h~~-~h~~~ 1141 (1303)
..++|.|.. |++.|.+...|..|++ +|.++
T Consensus 4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~ 36 (79)
T 2dlk_A 4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQ 36 (79)
T ss_dssp CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSC
T ss_pred CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCC
Confidence 457899998 9999999999999999 79864
No 282
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}
Probab=93.18 E-value=0.059 Score=39.43 Aligned_cols=23 Identities=22% Similarity=0.361 Sum_probs=19.2
Q ss_pred chhhhHHHHHHHHHHHHHHHhhc
Q 048174 725 KKEAAAVKIQKNSRTMMTRKAYS 747 (1303)
Q Consensus 725 r~~~AAi~IQ~~~Rg~~aRr~~~ 747 (1303)
+++.||++||+.||+|+.++...
T Consensus 4 ~Ee~aA~vIQrA~R~yl~rr~~~ 26 (31)
T 2l53_B 4 SEEVSAMVIQRAFRRHLLQRSLK 26 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Confidence 46689999999999999987644
No 283
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=93.17 E-value=0.044 Score=57.99 Aligned_cols=32 Identities=25% Similarity=0.374 Sum_probs=24.2
Q ss_pred HHHHcCCCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 86 EMINEGKSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 86 ~m~~~~~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
.|+.......|+|.|.||||||+.++.|...+
T Consensus 22 ~~m~~~~g~~i~l~G~~GsGKSTl~~~L~~~~ 53 (200)
T 4eun_A 22 SMMTGEPTRHVVVMGVSGSGKTTIAHGVADET 53 (200)
T ss_dssp ------CCCEEEEECCTTSCHHHHHHHHHHHH
T ss_pred hhhcCCCCcEEEEECCCCCCHHHHHHHHHHhh
Confidence 45556677899999999999999999998876
No 284
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=93.07 E-value=2.4 Score=39.89 Aligned_cols=30 Identities=17% Similarity=0.257 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 965 SEKRLKKLEETERRVYQLQDSLNRLLYCMS 994 (1303)
Q Consensus 965 ~~~l~~kl~e~E~~~~~Lq~el~~Le~kl~ 994 (1303)
+.....++++.+........++..|.-+|.
T Consensus 67 l~~a~~kLe~~ek~~~~AE~evasLnRriq 96 (101)
T 3u59_A 67 VKEAQEKLEQAEKKATDAEAEVASLNRRIQ 96 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333333444444443433
No 285
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Probab=92.89 E-value=0.65 Score=46.84 Aligned_cols=72 Identities=18% Similarity=0.237 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 926 EEEKIENLSAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRLLYCMSEQF 997 (1303)
Q Consensus 926 ~~~ki~~L~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl~~le 997 (1303)
..+++..|+.++.+.+...++...+.++..+++.-++..++....+.+..+..+..|..++..+-+.++.|+
T Consensus 50 deEr~~~lE~qLkeak~~aeeadrKyeE~~RKl~~~E~dLeraeeRae~aE~k~~eLEeeL~~~~~nlKsLE 121 (147)
T 2b9c_A 50 DEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLE 121 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 467888888888888888888888888888888888888888888888888888888888888877776663
No 286
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=92.80 E-value=0.042 Score=57.96 Aligned_cols=23 Identities=35% Similarity=0.559 Sum_probs=20.3
Q ss_pred EEEEeCCcCCCchhhHHHHHHHH
Q 048174 95 SILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 95 sIiisGESGaGKTe~~k~i~~yL 117 (1303)
-|||||.||||||+.++.++.-+
T Consensus 3 pIVi~GPSG~GK~Tl~~~L~~~~ 25 (186)
T 1ex7_A 3 PIVISGPSGTGKSTLLKKLFAEY 25 (186)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHhC
Confidence 39999999999999999888654
No 287
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=92.70 E-value=0.14 Score=52.23 Aligned_cols=62 Identities=13% Similarity=0.177 Sum_probs=39.8
Q ss_pred CcHHHHHHhcCCCCCCCCchHHHHHHHHHHHHHHcCCCeEEEEeCCcCCCchhhHHHHHHHHHH
Q 048174 56 YDAYMMERYKGVPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAY 119 (1303)
Q Consensus 56 y~~~~~~~y~~~~~~~~~PHifavA~~Ay~~m~~~~~~QsIiisGESGaGKTe~~k~i~~yLa~ 119 (1303)
|.....+.|+.....++.-+--.+ . .....+.......|+|+|++|+|||+.++.+.+.+..
T Consensus 8 ~~~~l~~~~~~~~~~~~~g~~~~~-~-~l~~~l~~~~~~~vll~G~~G~GKT~la~~~~~~~~~ 69 (187)
T 2p65_A 8 YSRDLTALARAGKLDPVIGRDTEI-R-RAIQILSRRTKNNPILLGDPGVGKTAIVEGLAIKIVQ 69 (187)
T ss_dssp TEEEHHHHHHTTCSCCCCSCHHHH-H-HHHHHHTSSSSCEEEEESCGGGCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccccchhhcchHHH-H-HHHHHHhCCCCCceEEECCCCCCHHHHHHHHHHHHHh
Confidence 455556667655554443222111 1 2223334566789999999999999999999888754
No 288
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=92.69 E-value=0.046 Score=56.92 Aligned_cols=25 Identities=12% Similarity=0.399 Sum_probs=22.5
Q ss_pred CeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 93 SNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 93 ~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
...|+|+|.||||||+.++.++..+
T Consensus 5 g~~i~i~GpsGsGKSTL~~~L~~~~ 29 (180)
T 1kgd_A 5 RKTLVLLGAHGVGRRHIKNTLITKH 29 (180)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHC
T ss_pred CCEEEEECCCCCCHHHHHHHHHhhC
Confidence 4689999999999999999998865
No 289
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=92.66 E-value=0.051 Score=53.15 Aligned_cols=33 Identities=18% Similarity=0.266 Sum_probs=27.7
Q ss_pred CCccccCccccccCccccchhHHhhcchhhhhh
Q 048174 1113 PKNYNCSFCRREFRSAQALGGHMNVHRRDRARL 1145 (1303)
Q Consensus 1113 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~ 1145 (1303)
.++|.|..|+|.|.+..+|..|+|+..-.+...
T Consensus 48 ekpfyC~~C~K~F~~~~~L~~H~rsK~HKrrvk 80 (124)
T 1zr9_A 48 GGLHRCLACARYFIDSTNLKTHFRSKDHKKRLK 80 (124)
T ss_dssp GGCSEETTTTEECSSHHHHHHHTTCHHHHHHHH
T ss_pred CcceEcccCcchhCCHHHHHHHHhhhhhhHHHH
Confidence 489999999999999999999998776554433
No 290
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=92.53 E-value=0.03 Score=43.83 Aligned_cols=31 Identities=10% Similarity=0.187 Sum_probs=23.5
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCR 1122 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~ 1122 (1303)
.+..+++|+|+.|+ |...+.++ ++|.|++||
T Consensus 4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~----------~~~~C~~cg 45 (45)
T 2epq_A 4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS----------VGKSGPSSG 45 (45)
T ss_dssp CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCC----------CCCCCCCCC
T ss_pred CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCC----------CCCCCcCCC
Confidence 45678899999996 34444444 899999997
No 291
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=92.34 E-value=0.052 Score=57.53 Aligned_cols=26 Identities=31% Similarity=0.515 Sum_probs=22.8
Q ss_pred CeEEEEeCCcCCCchhhHHHHHHHHH
Q 048174 93 SNSILVSGESGAGKTETTKMIMRYLA 118 (1303)
Q Consensus 93 ~QsIiisGESGaGKTe~~k~i~~yLa 118 (1303)
.+.|+|.|.||||||+..++|+.++.
T Consensus 4 g~~i~lvGpsGaGKSTLl~~L~~~~~ 29 (198)
T 1lvg_A 4 PRPVVLSGPSGAGKSTLLKKLFQEHS 29 (198)
T ss_dssp -CCEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHhhCc
Confidence 46899999999999999999998764
No 292
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=92.32 E-value=1.1 Score=44.73 Aligned_cols=69 Identities=12% Similarity=0.182 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 927 EEKIENLSAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRLLYCMSE 995 (1303)
Q Consensus 927 ~~ki~~L~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl~~ 995 (1303)
.+..-.+..+...|+++++++.+.+..+..++..++..++...++++++..++..|+.++..|+.++.+
T Consensus 67 adEl~k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~le~~~~~ 135 (138)
T 3hnw_A 67 ADDYFKAKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKLETELND 135 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455556666777777777777777777777777777777777777777888888888888888877654
No 293
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=92.23 E-value=0.046 Score=57.13 Aligned_cols=25 Identities=32% Similarity=0.522 Sum_probs=22.3
Q ss_pred eEEEEeCCcCCCchhhHHHHHHHHH
Q 048174 94 NSILVSGESGAGKTETTKMIMRYLA 118 (1303)
Q Consensus 94 QsIiisGESGaGKTe~~k~i~~yLa 118 (1303)
..|+|+|.||||||+.++.|+..+.
T Consensus 2 ~ii~l~GpsGaGKsTl~~~L~~~~~ 26 (186)
T 3a00_A 2 RPIVISGPSGTGKSTLLKKLFAEYP 26 (186)
T ss_dssp CCEEEESSSSSSHHHHHHHHHHHCG
T ss_pred CEEEEECCCCCCHHHHHHHHHhhCC
Confidence 4689999999999999999998764
No 294
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=92.17 E-value=0.11 Score=53.23 Aligned_cols=32 Identities=22% Similarity=0.377 Sum_probs=27.0
Q ss_pred HHcCCCeEEEEeCCcCCCchhhHHHHHHHHHH
Q 048174 88 INEGKSNSILVSGESGAGKTETTKMIMRYLAY 119 (1303)
Q Consensus 88 ~~~~~~QsIiisGESGaGKTe~~k~i~~yLa~ 119 (1303)
+..+....|+|+|++|+|||..++.+.+.+..
T Consensus 38 l~~~~~~~~ll~G~~G~GKT~l~~~~~~~~~~ 69 (195)
T 1jbk_A 38 LQRRTKNNPVLIGEPGVGKTAIVEGLAQRIIN 69 (195)
T ss_dssp HTSSSSCEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred HhcCCCCceEEECCCCCCHHHHHHHHHHHHHh
Confidence 34466789999999999999999999888754
No 295
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25
Probab=92.17 E-value=0.063 Score=55.86 Aligned_cols=30 Identities=27% Similarity=0.506 Sum_probs=23.7
Q ss_pred HHHcCCCeEEEEeCCcCCCchhhHHHHHHH
Q 048174 87 MINEGKSNSILVSGESGAGKTETTKMIMRY 116 (1303)
Q Consensus 87 m~~~~~~QsIiisGESGaGKTe~~k~i~~y 116 (1303)
|..-.+...|+|.|.||||||+.+|.|...
T Consensus 3 m~~i~~g~~i~l~G~~GsGKSTl~~~La~~ 32 (191)
T 1zp6_A 3 MTDDLGGNILLLSGHPGSGKSTIAEALANL 32 (191)
T ss_dssp ---CCTTEEEEEEECTTSCHHHHHHHHHTC
T ss_pred ccCCCCCeEEEEECCCCCCHHHHHHHHHhc
Confidence 555667889999999999999999988654
No 296
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=91.92 E-value=0.066 Score=55.02 Aligned_cols=25 Identities=28% Similarity=0.493 Sum_probs=21.9
Q ss_pred CeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 93 SNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 93 ~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
+..|+|+|-||||||+.++.+.+.|
T Consensus 3 ~~~i~l~G~~GsGKST~a~~La~~l 27 (178)
T 1qhx_A 3 TRMIILNGGSSAGKSGIVRCLQSVL 27 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHS
T ss_pred ceEEEEECCCCCCHHHHHHHHHHhc
Confidence 4589999999999999999987764
No 297
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus}
Probab=91.82 E-value=0.096 Score=58.19 Aligned_cols=36 Identities=31% Similarity=0.492 Sum_probs=29.5
Q ss_pred HHHHHHcCCCeEEEEeCCcCCCchhhHHHHHHHHHHH
Q 048174 84 YREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYL 120 (1303)
Q Consensus 84 y~~m~~~~~~QsIiisGESGaGKTe~~k~i~~yLa~~ 120 (1303)
++.+. -...+.|+|+|+||||||++.+.++.++...
T Consensus 17 l~~i~-i~~g~~v~i~Gp~GsGKSTll~~l~g~~~~~ 52 (261)
T 2eyu_A 17 VLELC-HRKMGLILVTGPTGSGKSTTIASMIDYINQT 52 (261)
T ss_dssp HHHGG-GCSSEEEEEECSTTCSHHHHHHHHHHHHHHH
T ss_pred HHHHh-hCCCCEEEEECCCCccHHHHHHHHHHhCCCC
Confidence 33433 5678899999999999999999999988643
No 298
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=91.80 E-value=4.5 Score=48.61 Aligned_cols=21 Identities=5% Similarity=0.047 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 048174 860 KECDITNKGIEVHVKECDTTD 880 (1303)
Q Consensus 860 ~E~~kL~~~ve~Le~qlee~e 880 (1303)
++.+.++..++..++..++.+
T Consensus 367 ~~~~~le~~~~~~~~~~~~~~ 387 (487)
T 3oja_A 367 QKKKALDEQVSNGRRAHAELD 387 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhh
Confidence 333444444444444444444
No 299
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=91.72 E-value=0.15 Score=54.50 Aligned_cols=37 Identities=14% Similarity=0.121 Sum_probs=30.1
Q ss_pred HHHHHHHcCCCeEEEEeCCcCCCchhhHHHHHHHHHH
Q 048174 83 AYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAY 119 (1303)
Q Consensus 83 Ay~~m~~~~~~QsIiisGESGaGKTe~~k~i~~yLa~ 119 (1303)
....+......+.|+|+|++|+|||+.++.+.+.+..
T Consensus 42 ~l~~~~~~~~~~~~ll~G~~G~GKT~la~~l~~~~~~ 78 (242)
T 3bos_A 42 ALKSAASGDGVQAIYLWGPVKSGRTHLIHAACARANE 78 (242)
T ss_dssp HHHHHHHTCSCSEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCeEEEECCCCCCHHHHHHHHHHHHHH
Confidence 3444455557899999999999999999999988764
No 300
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=91.51 E-value=0.12 Score=54.30 Aligned_cols=26 Identities=31% Similarity=0.353 Sum_probs=23.9
Q ss_pred eEEEEeCCcCCCchhhHHHHHHHHHH
Q 048174 94 NSILVSGESGAGKTETTKMIMRYLAY 119 (1303)
Q Consensus 94 QsIiisGESGaGKTe~~k~i~~yLa~ 119 (1303)
+.|+|.|++|+|||+.++.+..++..
T Consensus 55 ~~~~l~G~~GtGKT~la~~i~~~~~~ 80 (202)
T 2w58_A 55 KGLYLHGSFGVGKTYLLAAIANELAK 80 (202)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHHT
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHH
Confidence 89999999999999999999988764
No 301
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=91.45 E-value=3.5 Score=48.74 Aligned_cols=20 Identities=5% Similarity=-0.170 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 048174 862 CDITNKGIEVHVKECDTTDR 881 (1303)
Q Consensus 862 ~~kL~~~ve~Le~qlee~e~ 881 (1303)
.+.+...|++|+.++++...
T Consensus 59 ErDltkrINELKnqLEdlsK 78 (562)
T 3ghg_A 59 NQDFTNRINKLKNSLFEYQK 78 (562)
T ss_dssp HHHHHHHHHHHHHHHTHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHh
Confidence 34455555555555555543
No 302
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=91.41 E-value=0.083 Score=55.57 Aligned_cols=26 Identities=38% Similarity=0.621 Sum_probs=22.8
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 92 KSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
..+.|.|.|.||||||+.+++|...+
T Consensus 6 ~g~ii~l~Gp~GsGKSTl~~~L~~~~ 31 (205)
T 3tr0_A 6 KANLFIISAPSGAGKTSLVRALVKAL 31 (205)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHHS
T ss_pred CCcEEEEECcCCCCHHHHHHHHHhhC
Confidence 45689999999999999999988764
No 303
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.37 E-value=0.082 Score=41.37 Aligned_cols=30 Identities=17% Similarity=0.295 Sum_probs=22.4
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+++|+|..|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------k~~~C~~C 46 (46)
T 2ene_A 6 SGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGE----------KPSGPSSG 46 (46)
T ss_dssp SCCCSSSEECSSSCCEESSHHHHHHHHTTTCCC----------CCCSCCCC
T ss_pred CCCCCCCeECCCCCchhCChHHHHHHHhhcCCC----------CCCCCCCC
Confidence 35678899999996 33444443 89999998
No 304
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.37 E-value=0.094 Score=41.01 Aligned_cols=30 Identities=17% Similarity=0.281 Sum_probs=22.3
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+.+|.|+.|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~----------k~~~C~~C 46 (46)
T 2ytg_A 6 SGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGE----------KPSGPSSG 46 (46)
T ss_dssp CCSSCCSEECTTTCCEESSSHHHHTTGGGGSSC----------CSSCSCCC
T ss_pred CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCC----------CCCCCCCC
Confidence 35678899999996 44444443 89999998
No 305
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.19 E-value=0.09 Score=41.13 Aligned_cols=30 Identities=20% Similarity=0.304 Sum_probs=22.6
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+++|+|+.|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------k~~~C~~C 46 (46)
T 2em7_A 6 SGTGEKPYKCEECGKGFICRRDLYTHHMVHTGE----------KPSGPSSG 46 (46)
T ss_dssp SSSCCCSEECSSSCCEESCHHHHHHHGGGGTTC----------CCSSTTCC
T ss_pred CCCCCcCccCCCccchhCCHHHHHHHHHHhCCC----------CCCCCCCC
Confidence 35677899999996 44445444 89999998
No 306
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=91.18 E-value=0.09 Score=41.07 Aligned_cols=30 Identities=17% Similarity=0.306 Sum_probs=22.5
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+++|+|..|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------~~~~C~~C 46 (46)
T 2em9_A 6 SGTGEKPYNCKECGKSFRWASCLLKHQRVHSGE----------KPSGPSSG 46 (46)
T ss_dssp SCCCCCSEECSSSCCEESSHHHHHHHGGGGTSC----------CCCSTTCC
T ss_pred CCCCCcCeECCccccccCChHHHHHHHHHhCCC----------CCCCCCCC
Confidence 35678899999996 44444444 89999998
No 307
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.16 E-value=0.085 Score=41.28 Aligned_cols=30 Identities=20% Similarity=0.299 Sum_probs=22.5
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+.+|+|+.|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~----------k~~~C~~C 46 (46)
T 2ytn_A 6 SGTGKKPYKCNECGKVFTQNSHLARHRGIHTGE----------KPSGPSSG 46 (46)
T ss_dssp CCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCC----------CCCSCCCC
T ss_pred CCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCC----------CCCCCCCC
Confidence 45678899999996 44444444 89999998
No 308
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=91.14 E-value=0.11 Score=52.45 Aligned_cols=28 Identities=29% Similarity=0.296 Sum_probs=25.3
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHHHHHH
Q 048174 92 KSNSILVSGESGAGKTETTKMIMRYLAY 119 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~yLa~ 119 (1303)
..+.++|.|++|+|||+.++.+..++..
T Consensus 35 ~g~~~~l~G~~G~GKTtL~~~i~~~~~~ 62 (149)
T 2kjq_A 35 HGQFIYVWGEEGAGKSHLLQAWVAQALE 62 (149)
T ss_dssp CCSEEEEESSSTTTTCHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 6789999999999999999999988763
No 309
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=91.11 E-value=0.079 Score=56.49 Aligned_cols=27 Identities=26% Similarity=0.411 Sum_probs=23.4
Q ss_pred CCCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 91 GKSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 91 ~~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
.....|+|+|.||||||+.++.++..+
T Consensus 6 ~~g~~i~l~GpsGsGKsTl~~~L~~~~ 32 (208)
T 3tau_A 6 ERGLLIVLSGPSGVGKGTVREAVFKDP 32 (208)
T ss_dssp CCCCEEEEECCTTSCHHHHHHHHHHST
T ss_pred CCCcEEEEECcCCCCHHHHHHHHHhhC
Confidence 356789999999999999999988765
No 310
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.09 E-value=0.082 Score=41.44 Aligned_cols=30 Identities=23% Similarity=0.408 Sum_probs=22.5
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+++|+|+.|+ |...+.++ +||+|++|
T Consensus 6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~----------~~~~C~~C 46 (46)
T 2elz_A 6 SGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGE----------KTSGPSSG 46 (46)
T ss_dssp CCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSC----------CCCCSCCC
T ss_pred CCCCCCCeeCcccCchhCCHHHHHHHHHhcCCC----------CCCCCCCC
Confidence 35678899999996 34444444 89999998
No 311
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.07 E-value=0.095 Score=41.04 Aligned_cols=30 Identities=20% Similarity=0.302 Sum_probs=22.5
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+++|+|+.|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~----------k~~~C~~c 46 (46)
T 2emf_A 6 SGTGGKHFECTECGKAFTRKSTLSMHQKIHTGE----------KPSGPSSG 46 (46)
T ss_dssp SSSSSCCEECSSSCCEESCHHHHHHHGGGTSCS----------SCSCCCCC
T ss_pred ccCCCCCeECCCCCchhCCHHHHHHHHHHhCCC----------CCCCCCCC
Confidence 35677899999996 44444444 89999998
No 312
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=91.07 E-value=0.098 Score=40.84 Aligned_cols=30 Identities=17% Similarity=0.230 Sum_probs=22.7
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+.++.+|+|+.|+ |...++++ +||+|+.|
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------k~~~C~~C 46 (46)
T 2el4_A 6 SGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGV----------KPSGPSSG 46 (46)
T ss_dssp CSCCCCSEECSSSSCEESSHHHHHHHGGGSSSC----------CCSCCTTC
T ss_pred CCCCCCceECCCCCchhCCHHHHHHHHHHhCCC----------CCCCCCCC
Confidence 35678899999996 44445444 89999998
No 313
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=90.98 E-value=0.093 Score=55.78 Aligned_cols=29 Identities=17% Similarity=0.356 Sum_probs=23.6
Q ss_pred HcCCCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 89 NEGKSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 89 ~~~~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
.-...+.+.|.|+||||||+..+.|+..+
T Consensus 16 ~i~~Gei~~l~GpnGsGKSTLl~~l~gl~ 44 (207)
T 1znw_A 16 PAAVGRVVVLSGPSAVGKSTVVRCLRERI 44 (207)
T ss_dssp ---CCCEEEEECSTTSSHHHHHHHHHHHS
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHhhC
Confidence 33456799999999999999999998875
No 314
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.98 E-value=0.089 Score=41.16 Aligned_cols=30 Identities=20% Similarity=0.360 Sum_probs=22.5
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+++|+|+.|+ |...+.++ +||+|++|
T Consensus 6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------~~~~C~~C 46 (46)
T 2ysp_A 6 SGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGE----------RPSGPSSG 46 (46)
T ss_dssp CCSSCCSEEETTTTEEESCHHHHHHHHTTSCSC----------CSSCCSCC
T ss_pred CCCCCCCeECCCCCCccCCHHHHHHHHHhhCCC----------CCCCCCCC
Confidence 45678899999996 44444444 89999998
No 315
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.93 E-value=0.093 Score=41.04 Aligned_cols=30 Identities=17% Similarity=0.254 Sum_probs=22.4
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+.+|+|+.|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~----------k~~~C~~c 46 (46)
T 2eq0_A 6 SGTGEKPYKCHECGKVFRRNSHLARHQLIHTGE----------KPSGPSSG 46 (46)
T ss_dssp CTTCCCCEECTTTCCEESSHHHHHHHHTTTCCC----------CCSCCSCC
T ss_pred CCCCCCCeECCCCCchhCCHHHHHHHHHHcCCC----------CCCCCCCC
Confidence 45678899999996 34444443 89999998
No 316
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.90 E-value=0.095 Score=41.05 Aligned_cols=30 Identities=17% Similarity=0.264 Sum_probs=22.3
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+.+|+|+.|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~----------~~~~C~~C 46 (46)
T 2em5_A 6 SGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGE----------KPSGPSSG 46 (46)
T ss_dssp CCCCSCSEECSSSCCEESSHHHHHHHHTTTSCS----------CCSSCCCC
T ss_pred CCCCCCCeECCcCCCccCCHHHHHHHHHHhCCC----------CCCCCCCC
Confidence 35667899999996 34444444 89999998
No 317
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=90.86 E-value=0.11 Score=52.86 Aligned_cols=25 Identities=20% Similarity=0.294 Sum_probs=22.4
Q ss_pred CeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 93 SNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 93 ~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
-|.|+|+|.+|||||+.++.+-+.|
T Consensus 7 ~~~i~l~G~~GsGKSTva~~La~~l 31 (168)
T 1zuh_A 7 MQHLVLIGFMGSGKSSLAQELGLAL 31 (168)
T ss_dssp -CEEEEESCTTSSHHHHHHHHHHHH
T ss_pred cceEEEECCCCCCHHHHHHHHHHHh
Confidence 4899999999999999999988775
No 318
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.85 E-value=0.081 Score=41.35 Aligned_cols=30 Identities=17% Similarity=0.260 Sum_probs=22.5
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+.+|+|+.|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~----------~~~~C~~C 46 (46)
T 2eoe_A 6 SGTGEKPYKCNECGKVFTQNSHLANHQRIHTGV----------KPSGPSSG 46 (46)
T ss_dssp CCCCCCSSEETTTTEECSSHHHHHHHHGGGSCC----------CSCSSCCC
T ss_pred CCCCCCCeECCCcChhhCCHHHHHHHHHHcCCC----------CCCCCCCC
Confidence 45678899999996 34444444 89999998
No 319
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.78 E-value=0.093 Score=41.05 Aligned_cols=30 Identities=20% Similarity=0.281 Sum_probs=22.5
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+.++.+|+|+.|+ |...+.++ +||.|++|
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------~~~~C~~C 46 (46)
T 2eml_A 6 SGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGK----------KPSGPSSG 46 (46)
T ss_dssp CCSSCCSEECSSSCCEESSHHHHHHHHGGGSSC----------CCSCSSCC
T ss_pred CcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCC----------CCCCCCCC
Confidence 35678899999996 44444444 89999998
No 320
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=90.77 E-value=0.09 Score=41.20 Aligned_cols=30 Identities=13% Similarity=0.169 Sum_probs=22.6
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+.+|+|+.|+ |...+.++ +||+|++|
T Consensus 6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------~~~~C~~C 46 (46)
T 2el6_A 6 SGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTRE----------KPSGPSSG 46 (46)
T ss_dssp SSCCCCSEECSSSSCEESSHHHHHHHHGGGCCS----------SCCSCCCC
T ss_pred CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCC----------CCCCCCCC
Confidence 35678899999996 44445444 89999998
No 321
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=90.73 E-value=0.11 Score=54.87 Aligned_cols=25 Identities=36% Similarity=0.485 Sum_probs=22.3
Q ss_pred CeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 93 SNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 93 ~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
.-.|+|+|.||||||+.++.+.+.|
T Consensus 18 ~~~I~l~G~~GsGKSTla~~L~~~l 42 (202)
T 3t61_A 18 PGSIVVMGVSGSGKSSVGEAIAEAC 42 (202)
T ss_dssp SSCEEEECSTTSCHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHh
Confidence 3479999999999999999998876
No 322
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=90.73 E-value=0.12 Score=54.40 Aligned_cols=26 Identities=38% Similarity=0.460 Sum_probs=23.4
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 92 KSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
....|+|.|.||||||+.++.+.+.|
T Consensus 24 ~~~~i~l~G~~GsGKsTl~~~La~~l 49 (199)
T 3vaa_A 24 AMVRIFLTGYMGAGKTTLGKAFARKL 49 (199)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHc
Confidence 34699999999999999999999876
No 323
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=90.72 E-value=0.092 Score=41.07 Aligned_cols=30 Identities=20% Similarity=0.434 Sum_probs=22.3
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+.++++|+|+.|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~----------~~~~C~~C 46 (46)
T 2em0_A 6 SGMGEKTWKCRECDMCFSQASSLRLHQNVHVGE----------KPSGPSSG 46 (46)
T ss_dssp CSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSS----------SCSCSSCC
T ss_pred ccCCCcCeECCCCCcccCCHHHHHHHHHHcCCC----------CCcCCCCC
Confidence 35678899999996 34444444 89999998
No 324
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.71 E-value=0.1 Score=40.75 Aligned_cols=30 Identities=20% Similarity=0.331 Sum_probs=22.5
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+.++.+|+|+.|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~----------~~~~C~~C 46 (46)
T 2en1_A 6 SGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGE----------KPSGPSSG 46 (46)
T ss_dssp CCCCCCSEEETTTTEEESSHHHHHHHGGGGSCC----------CCSCCCCC
T ss_pred CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCC----------CCCCCCCC
Confidence 45678899999996 44444444 89999998
No 325
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=90.71 E-value=0.12 Score=54.75 Aligned_cols=28 Identities=29% Similarity=0.386 Sum_probs=23.9
Q ss_pred CCCeEEEEeCCcCCCchhhHHHHHHHHH
Q 048174 91 GKSNSILVSGESGAGKTETTKMIMRYLA 118 (1303)
Q Consensus 91 ~~~QsIiisGESGaGKTe~~k~i~~yLa 118 (1303)
.+...|.|.|.||||||+.++.|...+-
T Consensus 4 ~~~~~i~i~G~~GsGKSTl~~~l~~~~~ 31 (211)
T 3asz_A 4 PKPFVIGIAGGTASGKTTLAQALARTLG 31 (211)
T ss_dssp -CCEEEEEEESTTSSHHHHHHHHHHHHG
T ss_pred CCcEEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4567899999999999999999988763
No 326
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=90.66 E-value=5.9 Score=37.29 Aligned_cols=31 Identities=10% Similarity=-0.015 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 960 EARVLSEKRLKKLEETERRVYQLQDSLNRLL 990 (1303)
Q Consensus 960 e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le 990 (1303)
+....++...+...+.|..+..|...+.-|+
T Consensus 69 ea~~kLee~ek~~~~aE~ev~~L~RriqllE 99 (101)
T 3u1c_A 69 KSEDSLLFAEENAAKAESEVASLNRRIQLVE 99 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3333334444455566666666666666655
No 327
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.66 E-value=0.091 Score=41.10 Aligned_cols=30 Identities=17% Similarity=0.254 Sum_probs=22.1
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+.+|+|..|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------k~~~C~~C 46 (46)
T 2epz_A 6 SGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGE----------KPSGPSSG 46 (46)
T ss_dssp SCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTC----------CCCSSCCC
T ss_pred CcCCCCCeECCCCCceeCCHHHHHHHHHHhCCC----------CCCCCCCC
Confidence 35677899999996 33444433 89999998
No 328
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.65 E-value=0.1 Score=40.83 Aligned_cols=30 Identities=17% Similarity=0.276 Sum_probs=22.5
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+++|+|+.|+ |...+.++ +||+|++|
T Consensus 6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~----------k~~~C~~C 46 (46)
T 2ep0_A 6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGE----------KPSGPSSG 46 (46)
T ss_dssp SSTTCCSEECSSSCCEESSHHHHHHHHTTTSSS----------CCCSCCCC
T ss_pred CCCCCCCeeCcccCcccCChHHHHHHHHHhCCC----------CCCCCCCC
Confidence 35678899999996 44444444 89999998
No 329
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=90.64 E-value=0.12 Score=52.61 Aligned_cols=23 Identities=17% Similarity=0.225 Sum_probs=20.9
Q ss_pred EEEEeCCcCCCchhhHHHHHHHH
Q 048174 95 SILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 95 sIiisGESGaGKTe~~k~i~~yL 117 (1303)
.|+|+|.||||||+.++.+.+.|
T Consensus 3 ~i~l~G~~GsGKsT~~~~L~~~l 25 (173)
T 3kb2_A 3 LIILEGPDCCFKSTVAAKLSKEL 25 (173)
T ss_dssp EEEEECSSSSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 68999999999999999988765
No 330
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=90.57 E-value=0.1 Score=40.85 Aligned_cols=30 Identities=17% Similarity=0.340 Sum_probs=22.5
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+.++.+|+|+.|+ |...+.++ +||+|+.|
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------k~~~C~~c 46 (46)
T 2ema_A 6 SGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGE----------KPSGPSSG 46 (46)
T ss_dssp SCTTSCCEECSSSCCEESSHHHHHHHHTGGGCC----------CCCSSSCC
T ss_pred CCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCC----------CCCCCCCC
Confidence 35678899999996 34444444 89999998
No 331
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.56 E-value=0.096 Score=41.02 Aligned_cols=30 Identities=17% Similarity=0.238 Sum_probs=22.2
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+.+|+|+.|+ |...+.+ .+||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~----------~k~~~C~~C 46 (46)
T 2ytq_A 6 SGAGEKPYGCSECGKAFSSKSYLIIHMRTHSG----------EKPSGPSSG 46 (46)
T ss_dssp CSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCC----------SCSSCCCCC
T ss_pred CcCCCCCcCCCccChhhCChHHHHHHHHHhCC----------CCCCCCCCC
Confidence 35678899999996 3344443 389999998
No 332
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}
Probab=90.54 E-value=0.15 Score=36.24 Aligned_cols=20 Identities=20% Similarity=0.147 Sum_probs=16.2
Q ss_pred HhHHHHHHHHHHHhhHHHHH
Q 048174 779 KHAKGALSIQTSWRGHRDFS 798 (1303)
Q Consensus 779 ~~~~AA~~IQ~~~Rg~~aRr 798 (1303)
+++.||++||+.||+|+.++
T Consensus 4 ~Ee~aA~vIQrA~R~yl~~~ 23 (27)
T 2kxw_B 4 QEEVSAIVIQRAYRRYLLKQ 23 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 34679999999999998764
No 333
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=90.52 E-value=0.15 Score=52.31 Aligned_cols=26 Identities=23% Similarity=0.400 Sum_probs=23.0
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 92 KSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
....|+|.|.||||||+.++.+...+
T Consensus 7 ~g~~i~l~G~~GsGKSTl~~~l~~~~ 32 (175)
T 1knq_A 7 DHHIYVLMGVSGSGKSAVASEVAHQL 32 (175)
T ss_dssp TSEEEEEECSTTSCHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHhh
Confidence 45789999999999999999988765
No 334
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=90.48 E-value=0.11 Score=56.20 Aligned_cols=26 Identities=27% Similarity=0.442 Sum_probs=22.9
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 92 KSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
....|+|+|+||||||+..+.|+..+
T Consensus 15 ~G~ii~l~GpsGsGKSTLlk~L~g~~ 40 (219)
T 1s96_A 15 QGTLYIVSAPSGAGKSSLIQALLKTQ 40 (219)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHHS
T ss_pred CCcEEEEECCCCCCHHHHHHHHhccC
Confidence 46699999999999999999988764
No 335
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.47 E-value=0.1 Score=40.77 Aligned_cols=30 Identities=17% Similarity=0.246 Sum_probs=22.3
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+.+|+|+.|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------~~~~C~~C 46 (46)
T 2eme_A 6 SGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGE----------KPSGPSSG 46 (46)
T ss_dssp TTCCCCSEECSSSCCEESSHHHHHHHHGGGCCC----------SCCSSCCC
T ss_pred CCCCCCCeECCCCChhhCCHHHHHHHHHhcCCC----------CCCCCCCC
Confidence 35667899999996 34444444 89999998
No 336
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.45 E-value=0.11 Score=40.59 Aligned_cols=30 Identities=17% Similarity=0.245 Sum_probs=22.3
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+.+|+|+.|+ |...++++ +||+|+.|
T Consensus 6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~----------k~~~C~~C 46 (46)
T 2en8_A 6 SGSGEKSHTCDECGKNFCYISALRIHQRVHMGE----------KCSGPSSG 46 (46)
T ss_dssp CCCCCSSEECTTTCCEESSHHHHHHHHTTTCCS----------CSSCCSCC
T ss_pred cCCCCCCeECCCcCcccCCHHHHHHHHHHhCCC----------CCCCCCCC
Confidence 35678899999996 34444444 89999998
No 337
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=90.40 E-value=0.099 Score=54.98 Aligned_cols=26 Identities=38% Similarity=0.438 Sum_probs=22.9
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 92 KSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
....|+|.|.||||||+.++.|..++
T Consensus 5 ~g~~i~l~G~~GsGKSTl~~~L~~~~ 30 (207)
T 2j41_A 5 KGLLIVLSGPSGVGKGTVRKRIFEDP 30 (207)
T ss_dssp CCCEEEEECSTTSCHHHHHHHHHHCT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHhh
Confidence 45689999999999999999988765
No 338
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=90.35 E-value=0.19 Score=53.40 Aligned_cols=31 Identities=19% Similarity=0.318 Sum_probs=27.5
Q ss_pred HHcCCCeEEEEeCCcCCCchhhHHHHHHHHH
Q 048174 88 INEGKSNSILVSGESGAGKTETTKMIMRYLA 118 (1303)
Q Consensus 88 ~~~~~~QsIiisGESGaGKTe~~k~i~~yLa 118 (1303)
........|+|.|.+|||||+.++.+.++|.
T Consensus 20 ~~~~~~~~i~~~G~~GsGKsT~~~~l~~~l~ 50 (211)
T 1m7g_A 20 LRNQRGLTIWLTGLSASGKSTLAVELEHQLV 50 (211)
T ss_dssp HHTSSCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCCCHHHHHHHHHHHhc
Confidence 4456678999999999999999999999886
No 339
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.33 E-value=0.09 Score=41.06 Aligned_cols=30 Identities=17% Similarity=0.271 Sum_probs=22.0
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+++|+|+.|+ |...+.+ .+||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~----------~~~~~C~~C 46 (46)
T 2ytr_A 6 SGTGEKPYKCNECGKAFSQTSKLARHQRIHTG----------EKPSGPSSG 46 (46)
T ss_dssp CCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTT----------CSCCCSCCC
T ss_pred CCCCCcCcCCCCCCCccCCHHHHHHHHHhcCC----------CCCCCCCCC
Confidence 35678899999996 3344443 389999998
No 340
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=90.26 E-value=0.14 Score=54.53 Aligned_cols=27 Identities=15% Similarity=0.407 Sum_probs=24.0
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHHHHH
Q 048174 92 KSNSILVSGESGAGKTETTKMIMRYLA 118 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~yLa 118 (1303)
....|+|+|.||||||+.++.|++.+.
T Consensus 18 ~g~~ivl~GPSGaGKsTL~~~L~~~~~ 44 (197)
T 3ney_A 18 GRKTLVLIGASGVGRSHIKNALLSQNP 44 (197)
T ss_dssp SCCEEEEECCTTSSHHHHHHHHHHHCT
T ss_pred CCCEEEEECcCCCCHHHHHHHHHhhCC
Confidence 567999999999999999999998754
No 341
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.24 E-value=0.073 Score=41.65 Aligned_cols=30 Identities=23% Similarity=0.287 Sum_probs=22.1
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+++|+|+.|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~----------k~~~C~~C 46 (46)
T 2yso_A 6 SGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQ----------KNSGPSSG 46 (46)
T ss_dssp CSSCCCCEECTTTCCEESSHHHHHHHHHHHSCC----------SCCCTTCC
T ss_pred ccCCCCCEEccccChhhCCHHHHHHHHHHhCCC----------CCCCCCCC
Confidence 35677899999996 33344444 89999998
No 342
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=90.23 E-value=0.073 Score=55.31 Aligned_cols=27 Identities=26% Similarity=0.252 Sum_probs=24.8
Q ss_pred eEEEEeCCcCCCchhhHHHHHHHHHHH
Q 048174 94 NSILVSGESGAGKTETTKMIMRYLAYL 120 (1303)
Q Consensus 94 QsIiisGESGaGKTe~~k~i~~yLa~~ 120 (1303)
+.|.|.|+||||||+.++.|++++...
T Consensus 3 ~~v~IvG~SGsGKSTL~~~L~~~~~~~ 29 (171)
T 2f1r_A 3 LILSIVGTSDSGKTTLITRMMPILRER 29 (171)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhhhc
Confidence 578999999999999999999999864
No 343
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=90.19 E-value=2.5 Score=42.32 Aligned_cols=29 Identities=14% Similarity=-0.052 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 973 EETERRVYQLQDSLNRLLYCMSEQFSQLK 1001 (1303)
Q Consensus 973 ~e~E~~~~~Lq~el~~Le~kl~~le~El~ 1001 (1303)
+....++..|+-++..+++++..++.|+.
T Consensus 99 e~l~DEl~aLqlq~n~lE~kl~kLq~EN~ 127 (152)
T 3a7p_A 99 ERLNAALISGTIENNVLQQKLSDLKKEHS 127 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444444444445555555555443
No 344
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.17 E-value=0.1 Score=40.69 Aligned_cols=30 Identities=17% Similarity=0.211 Sum_probs=21.9
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+.++.+|+|..|+ |...+.+ .+||+|++|
T Consensus 6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~----------~k~~~C~~C 46 (46)
T 2eop_A 6 SGTGEKPHECRECGKSFSFNSQLIVHQRIHTG----------ENPSGPSSG 46 (46)
T ss_dssp SCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTT----------SCCSCCCCC
T ss_pred ccCCCCCeeCCCCCchhCCHHHHHHHHHHcCC----------CCCCCCCCC
Confidence 35677899999996 3333443 389999998
No 345
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=90.13 E-value=14 Score=35.60 Aligned_cols=23 Identities=13% Similarity=0.144 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 048174 862 CDITNKGIEVHVKECDTTDRAIE 884 (1303)
Q Consensus 862 ~~kL~~~ve~Le~qlee~e~~~~ 884 (1303)
+..|+..++.++.++++-...++
T Consensus 13 ia~L~~D~~s~~~eleEnqeEL~ 35 (167)
T 4gkw_A 13 VADLKQDTESLQKQLEENQEELE 35 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555544443
No 346
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=90.07 E-value=0.11 Score=56.05 Aligned_cols=27 Identities=22% Similarity=0.432 Sum_probs=23.6
Q ss_pred CCCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 91 GKSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 91 ~~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
...+.|.|.|+||||||+..+.|+..+
T Consensus 21 ~~G~~~~lvGpsGsGKSTLl~~L~g~~ 47 (218)
T 1z6g_A 21 NNIYPLVICGPSGVGKGTLIKKLLNEF 47 (218)
T ss_dssp -CCCCEEEECSTTSSHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHhhC
Confidence 356789999999999999999999876
No 347
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}
Probab=90.00 E-value=0.25 Score=36.18 Aligned_cols=20 Identities=25% Similarity=0.224 Sum_probs=16.7
Q ss_pred hHHHHHHHHHHHhhHHHHHH
Q 048174 780 HAKGALSIQTSWRGHRDFSY 799 (1303)
Q Consensus 780 ~~~AA~~IQ~~~Rg~~aRr~ 799 (1303)
++.+|+.||+.||+|+.|+.
T Consensus 5 Ee~aA~vIQrA~R~yl~rr~ 24 (31)
T 2l53_B 5 EEVSAMVIQRAFRRHLLQRS 24 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 46789999999999988765
No 348
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.97 E-value=0.12 Score=40.38 Aligned_cols=30 Identities=20% Similarity=0.292 Sum_probs=22.3
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+.++.+|.|+.|+ |...+.++ +||+|+.|
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------k~~~C~~c 46 (46)
T 2ep2_A 6 SGTGEKPYECSICGKSFTKKSQLHVHQQIHTGE----------KPSGPSSG 46 (46)
T ss_dssp CSSCCCSEECSSSCCEESSHHHHHHHHHTTSSC----------CSCCSCCC
T ss_pred CCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCC----------CCCCCCCC
Confidence 45678899999996 33444444 89999998
No 349
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.96 E-value=0.11 Score=40.59 Aligned_cols=30 Identities=23% Similarity=0.225 Sum_probs=22.1
Q ss_pred ccccccceecCCCc-----------cCC-ccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSE-AQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~-~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+++|+|..|+ |.. .+.+ .+||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~----------~k~~~C~~C 47 (47)
T 2epx_A 6 SGTGKKPYECIECGKAFIQNTSLIRHWRYYHTG----------EKPSGPSSG 47 (47)
T ss_dssp CCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTT----------SCSSSCCCC
T ss_pred ccCCCCCEECCccCchhCChHHHHHHhHhhcCC----------CCCCCCCCC
Confidence 45677899999996 333 4443 389999998
No 350
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.95 E-value=0.096 Score=40.91 Aligned_cols=30 Identities=13% Similarity=0.166 Sum_probs=21.9
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+.+|+|+.|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~----------k~~~C~~C 46 (46)
T 2epw_A 6 SGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDD----------KHSGPSSG 46 (46)
T ss_dssp CCCCCCSEECSSSCCEESSSHHHHHHHHHCCSC----------CCSCCCCC
T ss_pred cCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCC----------CCCCCCCC
Confidence 35677899999996 33334433 89999998
No 351
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.93 E-value=0.095 Score=41.00 Aligned_cols=30 Identities=20% Similarity=0.344 Sum_probs=22.3
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+++|+|+.|+ |...++++ +||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------~~~~C~~C 46 (46)
T 2enc_A 6 SGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGE----------KPSGPSSG 46 (46)
T ss_dssp CCCCCCSEECSSSCCEESSHHHHHHHHHHSCCS----------SCCSSCCC
T ss_pred CCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCC----------CCCCCCCC
Confidence 35677899999996 33444444 89999998
No 352
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11
Probab=89.90 E-value=0.14 Score=53.38 Aligned_cols=23 Identities=43% Similarity=0.720 Sum_probs=21.3
Q ss_pred EEEEeCCcCCCchhhHHHHHHHH
Q 048174 95 SILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 95 sIiisGESGaGKTe~~k~i~~yL 117 (1303)
.|.|.|++|||||+..|.|+..+
T Consensus 2 ~i~l~G~nGsGKTTLl~~l~g~l 24 (178)
T 1ye8_A 2 KIIITGEPGVGKTTLVKKIVERL 24 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 57899999999999999999887
No 353
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A
Probab=89.88 E-value=0.15 Score=52.10 Aligned_cols=27 Identities=30% Similarity=0.489 Sum_probs=25.2
Q ss_pred CCCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 91 GKSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 91 ~~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
...+.|.|.|++|||||+..|.|+..+
T Consensus 31 ~~Ge~v~L~G~nGaGKTTLlr~l~g~l 57 (158)
T 1htw_A 31 EKAIMVYLNGDLGAGKTTLTRGMLQGI 57 (158)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHhC
Confidence 677899999999999999999999988
No 354
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.84 E-value=0.088 Score=41.11 Aligned_cols=30 Identities=17% Similarity=0.232 Sum_probs=22.1
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+.+|+|+.|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------k~~~C~~C 46 (46)
T 2emm_A 6 SGTGERPHKCNECGKSFIQSAHLIQHQRIHTGE----------KPSGPSSG 46 (46)
T ss_dssp CSSCCCSEECSSSCCEESSHHHHHHHHHHHSCC----------CTTSSSCC
T ss_pred CcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCC----------CCCCCCCC
Confidence 35678899999996 33344444 89999998
No 355
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.84 E-value=0.084 Score=48.20 Aligned_cols=28 Identities=21% Similarity=0.330 Sum_probs=25.3
Q ss_pred CccccCccccccCccccchhHHhh-cchh
Q 048174 1114 KNYNCSFCRREFRSAQALGGHMNV-HRRD 1141 (1303)
Q Consensus 1114 ~~~~c~~c~~~f~~~~~l~~h~~~-h~~~ 1141 (1303)
..|.|+.|++.|.+..+|..|+++ |.++
T Consensus 24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~ 52 (95)
T 2ej4_A 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGG 52 (95)
T ss_dssp SSSSCCCCCCCCSSHHHHHHHHHHTTTCC
T ss_pred CCCcccccccccCCHHHHHHHHHHhccCC
Confidence 358899999999999999999998 8865
No 356
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.80 E-value=0.085 Score=40.85 Aligned_cols=30 Identities=13% Similarity=0.145 Sum_probs=22.0
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+.++++|+|+.|+ |...+.++ +||+|++|
T Consensus 4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------~~~~C~~C 44 (44)
T 2emx_A 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEE----------KPSGPSSG 44 (44)
T ss_dssp CCSSCCCEECSSSSCEESSHHHHHHHHHHHTSS----------CSCSCCCC
T ss_pred CcCCCcCccCCCCCcccCCHHHHHHHHHHhCCC----------CCCCCCCC
Confidence 34677899999996 33344444 89999998
No 357
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=89.79 E-value=0.15 Score=52.59 Aligned_cols=26 Identities=31% Similarity=0.378 Sum_probs=23.1
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 92 KSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
....|+|+|.||||||+.++.+.+.|
T Consensus 10 ~~~~i~i~G~~GsGKst~~~~l~~~~ 35 (180)
T 3iij_A 10 LLPNILLTGTPGVGKTTLGKELASKS 35 (180)
T ss_dssp CCCCEEEECSTTSSHHHHHHHHHHHH
T ss_pred cCCeEEEEeCCCCCHHHHHHHHHHHh
Confidence 45689999999999999999988776
No 358
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=89.74 E-value=0.12 Score=54.72 Aligned_cols=27 Identities=26% Similarity=0.464 Sum_probs=23.5
Q ss_pred CCCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 91 GKSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 91 ~~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
.....|+|+|.||||||+.++.+.+.+
T Consensus 10 ~~~~~i~l~G~sGsGKsTl~~~L~~~~ 36 (204)
T 2qor_A 10 ARIPPLVVCGPSGVGKGTLIKKVLSEF 36 (204)
T ss_dssp CCCCCEEEECCTTSCHHHHHHHHHHHC
T ss_pred ccCCEEEEECCCCCCHHHHHHHHHHhC
Confidence 356689999999999999999988776
No 359
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=89.74 E-value=0.16 Score=52.45 Aligned_cols=26 Identities=27% Similarity=0.563 Sum_probs=23.2
Q ss_pred CeEEEEeCCcCCCchhhHHHHHHHHH
Q 048174 93 SNSILVSGESGAGKTETTKMIMRYLA 118 (1303)
Q Consensus 93 ~QsIiisGESGaGKTe~~k~i~~yLa 118 (1303)
+.-|+|+|.+|||||+.++.+.+.|-
T Consensus 3 ~~~I~i~G~~GsGKsT~~~~L~~~l~ 28 (192)
T 1kht_A 3 NKVVVVTGVPGVGSTTSSQLAMDNLR 28 (192)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 35799999999999999999988775
No 360
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.70 E-value=0.089 Score=41.17 Aligned_cols=30 Identities=17% Similarity=0.271 Sum_probs=22.1
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+.++.+|+|+.|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------~~~~C~~C 46 (46)
T 2yu8_A 6 SGTGEKPYKCNECGKVFTQNSHLARHRRVHTGG----------KPSGPSSG 46 (46)
T ss_dssp CCCCCSSEECSSSCCEESSSHHHHHHTHHHHSC----------CCSCSCCC
T ss_pred CCCCCCCeECCcCCchhCCHHHHHHHHHhcCCC----------CCCCCCCC
Confidence 45678899999996 33334433 89999998
No 361
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=89.67 E-value=0.18 Score=51.92 Aligned_cols=28 Identities=32% Similarity=0.569 Sum_probs=25.0
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHHHHHH
Q 048174 92 KSNSILVSGESGAGKTETTKMIMRYLAY 119 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~yLa~ 119 (1303)
+...|+|+|.+|||||+.++.+..+|..
T Consensus 4 ~g~~i~l~G~~GsGKST~~~~L~~~l~~ 31 (179)
T 2pez_A 4 RGCTVWLTGLSGAGKTTVSMALEEYLVC 31 (179)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHhh
Confidence 4678999999999999999999998854
No 362
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A*
Probab=89.61 E-value=0.23 Score=58.95 Aligned_cols=35 Identities=31% Similarity=0.508 Sum_probs=29.2
Q ss_pred HHHHHHHcCCCeEEEEeCCcCCCchhhHHHHHHHHH
Q 048174 83 AYREMINEGKSNSILVSGESGAGKTETTKMIMRYLA 118 (1303)
Q Consensus 83 Ay~~m~~~~~~QsIiisGESGaGKTe~~k~i~~yLa 118 (1303)
+++.+. ......|+|+|++|||||++.+.++.++.
T Consensus 158 ~L~~l~-~~~ggii~I~GpnGSGKTTlL~allg~l~ 192 (418)
T 1p9r_A 158 NFRRLI-KRPHGIILVTGPTGSGKSTTLYAGLQELN 192 (418)
T ss_dssp HHHHHH-TSSSEEEEEECSTTSCHHHHHHHHHHHHC
T ss_pred HHHHHH-HhcCCeEEEECCCCCCHHHHHHHHHhhcC
Confidence 566664 46677999999999999999999999874
No 363
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=89.60 E-value=0.18 Score=56.90 Aligned_cols=30 Identities=30% Similarity=0.276 Sum_probs=26.7
Q ss_pred cCCCeEEEEeCCcCCCchhhHHHHHHHHHH
Q 048174 90 EGKSNSILVSGESGAGKTETTKMIMRYLAY 119 (1303)
Q Consensus 90 ~~~~QsIiisGESGaGKTe~~k~i~~yLa~ 119 (1303)
.+....|.|+|.||||||+.++.|..+|..
T Consensus 28 ~~~~~ii~I~G~sGsGKSTla~~L~~~l~~ 57 (290)
T 1odf_A 28 NKCPLFIFFSGPQGSGKSFTSIQIYNHLME 57 (290)
T ss_dssp CCSCEEEEEECCTTSSHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHhhh
Confidence 456789999999999999999999999864
No 364
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.58 E-value=0.088 Score=41.19 Aligned_cols=30 Identities=17% Similarity=0.290 Sum_probs=22.3
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+.+|+|+.|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~----------k~~~C~~C 46 (46)
T 2en6_A 6 SGSGEKPYGCNECGKTFSQKSILSAHQRTHTGE----------KPSGPSSG 46 (46)
T ss_dssp CCCSSCCEEETTTTEEESSHHHHHHHHHHHSSC----------CCSSSCCC
T ss_pred ccCCCcCeECCCCCcccCchHHHHHHHHHcCCC----------CCCCCCCC
Confidence 45678899999996 33444444 89999998
No 365
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=89.58 E-value=0.084 Score=41.37 Aligned_cols=30 Identities=17% Similarity=0.217 Sum_probs=21.6
Q ss_pred ccccccceecCCCcc-----------CCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCSC-----------SEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~~-----------~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+.+|+|+.|+. ...+.+ .+||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~----------~k~~~C~~C 46 (46)
T 2ely_A 6 SGTGEKPFKCVECGKGFSRRSALNVHHKLHTG----------EKPSGPSSG 46 (46)
T ss_dssp CCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSC----------CSSCSCCCC
T ss_pred CCCCCCCcccCccCcccCCHHHHHHHHHHcCC----------CCCCCCCCC
Confidence 356778999999963 233333 489999998
No 366
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.58 E-value=0.094 Score=41.01 Aligned_cols=30 Identities=13% Similarity=0.242 Sum_probs=22.2
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+++|+|+.|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------~~~~C~~C 46 (46)
T 2ytd_A 6 SGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGY----------RPSGPSSG 46 (46)
T ss_dssp CSCCCCSEECSSSCCEESSHHHHHHHHHHHTCC----------CSSCSSCC
T ss_pred ccCCCcCeECCCCCCeeCChHHHHHHHHHcCCC----------CCCCCCCC
Confidence 35677899999996 33444444 89999998
No 367
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.55 E-value=0.095 Score=40.98 Aligned_cols=30 Identities=17% Similarity=0.211 Sum_probs=21.9
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+.+|+|+.|+ |...++++ +||.|++|
T Consensus 6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~----------k~~~C~~C 46 (46)
T 2eoq_A 6 SGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAE----------KPSGPSSG 46 (46)
T ss_dssp CSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCC----------CSSSCCCC
T ss_pred CCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCC----------CCCCCCCC
Confidence 45678899999996 33334433 89999998
No 368
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.51 E-value=0.091 Score=41.03 Aligned_cols=30 Identities=17% Similarity=0.275 Sum_probs=21.9
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+.+|+|+.|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------~~~~C~~C 46 (46)
T 2eq4_A 6 SGTGEKLYNCKECGKSFSRAPCLLKHERLHSGE----------KPSGPSSG 46 (46)
T ss_dssp CSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSS----------SCCCCCCC
T ss_pred cCCCCCCeECCCCCCccCchHHHHHHHHhcCCC----------CCCCCCCC
Confidence 35677899999996 33334433 89999998
No 369
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=89.51 E-value=0.2 Score=52.94 Aligned_cols=31 Identities=23% Similarity=0.231 Sum_probs=26.8
Q ss_pred CCCeEEEEeCCcCCCchhhHHHHHHHHHHHh
Q 048174 91 GKSNSILVSGESGAGKTETTKMIMRYLAYLG 121 (1303)
Q Consensus 91 ~~~QsIiisGESGaGKTe~~k~i~~yLa~~~ 121 (1303)
.....|.|+|.||||||+.++.+...|...+
T Consensus 20 ~~~~~i~i~G~~GsGKstl~~~l~~~~~~~~ 50 (201)
T 1rz3_A 20 AGRLVLGIDGLSRSGKTTLANQLSQTLREQG 50 (201)
T ss_dssp SSSEEEEEEECTTSSHHHHHHHHHHHHHHTT
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHhhcC
Confidence 4568999999999999999999999886543
No 370
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=89.47 E-value=2 Score=38.22 Aligned_cols=61 Identities=20% Similarity=0.201 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 939 KLKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRLLYCMSEQFSQ 999 (1303)
Q Consensus 939 kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl~~le~E 999 (1303)
.|+..++....--.-+..++...+..+...+.++.+.+.++..|..++..|+.++.+|+.+
T Consensus 14 eLQSALeaEIqAKQ~i~EELs~vr~~ni~~eskL~eae~rn~eL~~e~~~l~~~~eelq~~ 74 (81)
T 1wt6_A 14 ELQEALEEEVLTRQSLSREMEAIRTDNQNFASQLREAEARNRDLEAHVRQLQERMELLQAE 74 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3444444444444455566777777777788888899999999988888888888876543
No 371
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.47 E-value=0.11 Score=40.57 Aligned_cols=30 Identities=17% Similarity=0.176 Sum_probs=22.2
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+.++.+|.|+.|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------k~~~C~~c 46 (46)
T 2ytj_A 6 SGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQ----------KPSGPSSG 46 (46)
T ss_dssp TTSSCCSEECSSSCCEESSHHHHHHHHHHTSCC----------CCSSCSCC
T ss_pred CCCCCcCeECCCCChhhCCHHHHHHHHHHcCCC----------CCCCCCCC
Confidence 35678899999996 33444444 89999998
No 372
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=89.37 E-value=0.19 Score=52.14 Aligned_cols=26 Identities=27% Similarity=0.429 Sum_probs=23.1
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 92 KSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
...-|+|+|.+|||||+.++.+.++|
T Consensus 4 ~~~~I~l~G~~GsGKST~~~~L~~~l 29 (193)
T 2rhm_A 4 TPALIIVTGHPATGKTTLSQALATGL 29 (193)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHc
Confidence 35689999999999999999998876
No 373
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A*
Probab=89.34 E-value=0.23 Score=57.77 Aligned_cols=36 Identities=25% Similarity=0.527 Sum_probs=28.7
Q ss_pred HHHHHHcCCCeEEEEeCCcCCCchhhHHHHHHHHHHH
Q 048174 84 YREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYL 120 (1303)
Q Consensus 84 y~~m~~~~~~QsIiisGESGaGKTe~~k~i~~yLa~~ 120 (1303)
+..+.. .....|+|+|.||||||++.+.++.++..-
T Consensus 115 l~~l~~-~~~g~i~I~GptGSGKTTlL~~l~g~~~~~ 150 (356)
T 3jvv_A 115 FKRVSD-VPRGLVLVTGPTGSGKSTTLAAMLDYLNNT 150 (356)
T ss_dssp HHHHHH-CSSEEEEEECSTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHh-CCCCEEEEECCCCCCHHHHHHHHHhcccCC
Confidence 445533 344599999999999999999999998754
No 374
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.34 E-value=0.098 Score=40.91 Aligned_cols=30 Identities=20% Similarity=0.323 Sum_probs=22.2
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+.+|+|+.|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~----------k~~~C~~C 46 (46)
T 2emy_A 6 SGTGENPYECHECGKAFSRKYQLISHQRTHAGE----------KPSGPSSG 46 (46)
T ss_dssp CCCSSCCEECSSSCCEESSHHHHHHHHHHHTTS----------CCSCSSCC
T ss_pred CCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCC----------CCCCCCCC
Confidence 45678899999996 33344444 89999998
No 375
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.27 E-value=0.096 Score=40.95 Aligned_cols=30 Identities=17% Similarity=0.258 Sum_probs=22.1
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+.+|+|..|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~----------~~~~C~~c 46 (46)
T 2ytk_A 6 SGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGE----------KPSGPSSG 46 (46)
T ss_dssp CSSSSCSEECSSSCCEESSHHHHHHHHHHHSSS----------SCSSCCCC
T ss_pred cCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCC----------CCCCCCCC
Confidence 35678899999996 33344443 89999998
No 376
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.15 E-value=0.095 Score=40.93 Aligned_cols=30 Identities=13% Similarity=0.296 Sum_probs=21.7
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+++|+|+.|+ |...+.+ .+||+|++|
T Consensus 6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~----------~~~~~C~~C 46 (46)
T 2eov_A 6 SGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTG----------ERHSGPSSG 46 (46)
T ss_dssp CCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSC----------CSSCCSCCC
T ss_pred CCCCCCCccCCccChhhCCHHHHHHHHHhcCC----------CCCCCCCCC
Confidence 35667899999996 3333333 389999998
No 377
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=89.12 E-value=0.19 Score=52.27 Aligned_cols=28 Identities=29% Similarity=0.308 Sum_probs=25.0
Q ss_pred eEEEEeCCcCCCchhhHHHHHHHHHHHh
Q 048174 94 NSILVSGESGAGKTETTKMIMRYLAYLG 121 (1303)
Q Consensus 94 QsIiisGESGaGKTe~~k~i~~yLa~~~ 121 (1303)
..|+|+|.||||||+.++.++..|...+
T Consensus 7 ~~i~i~G~sGsGKTTl~~~l~~~l~~~g 34 (174)
T 1np6_A 7 PLLAFAAWSGTGKTTLLKKLIPALCARG 34 (174)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHHTT
T ss_pred eEEEEEeCCCCCHHHHHHHHHHhccccC
Confidence 5799999999999999999999987643
No 378
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=89.03 E-value=4.6 Score=36.40 Aligned_cols=66 Identities=8% Similarity=0.103 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 927 EEKIENLSAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRLLYCMSEQFSQ 999 (1303)
Q Consensus 927 ~~ki~~L~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl~~le~E 999 (1303)
..+++.|..+.......++.++..+.+.+......+.++..+. .++..|+.++...++++......
T Consensus 5 kkKm~~lk~e~d~a~~~~~~~e~~l~~~e~~~~~~E~ev~~L~-------kKiq~lE~eld~~ee~l~~a~~k 70 (81)
T 1ic2_A 5 KKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQ-------KKLKGTEDELDKYSESLKDAQEK 70 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556666666666666666666665555555555554444444 44444444444444444444333
No 379
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=89.00 E-value=0.35 Score=54.38 Aligned_cols=26 Identities=27% Similarity=0.489 Sum_probs=23.0
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 92 KSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
....|||+|.||||||+.++.+...+
T Consensus 32 ~~~livl~G~sGsGKSTla~~L~~~~ 57 (287)
T 1gvn_B 32 SPTAFLLGGQPGSGKTSLRSAIFEET 57 (287)
T ss_dssp SCEEEEEECCTTSCTHHHHHHHHHHT
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHh
Confidence 45789999999999999999998765
No 380
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=88.99 E-value=0.035 Score=51.09 Aligned_cols=47 Identities=6% Similarity=0.096 Sum_probs=34.5
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCccccccCccccchhHHhhcchhh
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRDR 1142 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~ 1142 (1303)
.+..+.+|+|..|+ |...++++ +||+|..|. ....|..|++.|.+.-
T Consensus 19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~e----------kp~~C~~~~----~~~~~~~~~~~~~~~~ 76 (88)
T 1x6f_A 19 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEE----------FQKRAKRQE----RRKQLLSKQKYADGAF 76 (88)
T ss_dssp SCCCCSCEECSSSCCEESSHHHHHHHHHHHHHH----------HHHHCCCCS----CCCCCCCCCCCCCCSS
T ss_pred ccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCC----------CCcccchhh----hHHHHHhhhccccccc
Confidence 35677899999996 33334443 899997765 5778889999999743
No 381
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=88.99 E-value=0.21 Score=56.93 Aligned_cols=30 Identities=27% Similarity=0.307 Sum_probs=26.3
Q ss_pred cCCCeEEEEeCCcCCCchhhHHHHHHHHHH
Q 048174 90 EGKSNSILVSGESGAGKTETTKMIMRYLAY 119 (1303)
Q Consensus 90 ~~~~QsIiisGESGaGKTe~~k~i~~yLa~ 119 (1303)
..+...|.|.|.||||||+.++.|...+..
T Consensus 87 ~~~g~ivgI~G~sGsGKSTL~~~L~gll~~ 116 (312)
T 3aez_A 87 RPVPFIIGVAGSVAVGKSTTARVLQALLAR 116 (312)
T ss_dssp SCCCEEEEEECCTTSCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEECCCCchHHHHHHHHHhhccc
Confidence 466789999999999999999999888753
No 382
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=88.98 E-value=0.16 Score=52.43 Aligned_cols=24 Identities=25% Similarity=0.357 Sum_probs=22.6
Q ss_pred EEEEeCCcCCCchhhHHHHHHHHH
Q 048174 95 SILVSGESGAGKTETTKMIMRYLA 118 (1303)
Q Consensus 95 sIiisGESGaGKTe~~k~i~~yLa 118 (1303)
-|+|+|-+|||||+.++.+.+.|.
T Consensus 3 ~I~i~G~~GsGKsT~~~~L~~~l~ 26 (194)
T 1nks_A 3 IGIVTGIPGVGKSTVLAKVKEILD 26 (194)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Confidence 599999999999999999999886
No 383
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.97 E-value=0.092 Score=41.12 Aligned_cols=30 Identities=17% Similarity=0.253 Sum_probs=22.2
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+++|+|+.|+ |...+.++ +||.|++|
T Consensus 6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------~~~~C~~C 46 (46)
T 2em8_A 6 SGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGE----------KLSGPSSG 46 (46)
T ss_dssp CCCSCCSEECSSSCCEESSHHHHHHHHHHHHCC----------CCCCSCCC
T ss_pred CCCCCCCeECcccCchhCCHHHHHHHHHHHcCC----------CCCCCCCC
Confidence 35677899999996 33444444 89999998
No 384
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.93 E-value=0.091 Score=41.10 Aligned_cols=30 Identities=17% Similarity=0.202 Sum_probs=22.2
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+.++.+|.|+.|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------k~~~C~~C 46 (46)
T 2emp_A 6 SGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGE----------KPSGPSSG 46 (46)
T ss_dssp CSSCCCSEECSSSCCEESCHHHHHHHHHHHHCC----------SCCSCCCC
T ss_pred ccCCCcCeECCCCCchhCCHHHHHHHHHHcCCC----------CCCCCCCC
Confidence 35678899999996 33344444 89999998
No 385
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.89 E-value=0.091 Score=41.15 Aligned_cols=30 Identities=13% Similarity=0.190 Sum_probs=22.2
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+.++.+|.|+.|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~----------k~~~C~~C 46 (46)
T 2eoo_A 6 SGSGERPYGCNECGKNFGRHSHLIEHLKRHFRE----------KSSGPSSG 46 (46)
T ss_dssp CCSCCCCEECSSSCCEESSHHHHHHHHHHHHST----------TSSCCSCC
T ss_pred CCCCCCCEEccccCcccCCHHHHHHHHHHHcCC----------CCCCCCCC
Confidence 45678899999996 33334444 89999998
No 386
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=88.88 E-value=0.1 Score=40.91 Aligned_cols=30 Identities=20% Similarity=0.335 Sum_probs=22.0
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+.++.+|+|+.|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~----------k~~~C~~C 46 (46)
T 2emk_A 6 SGTGEKPYECKECGKAFSQTTHLIQHQRVHTGE----------KPSGPSSG 46 (46)
T ss_dssp CCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSC----------CCSSCCCC
T ss_pred ccCCCCceECCCCCchhCCHHHHHHHHHHcCCC----------CCCCCCCC
Confidence 35678899999996 33334443 89999998
No 387
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.88 E-value=0.17 Score=39.52 Aligned_cols=30 Identities=17% Similarity=0.285 Sum_probs=22.0
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+.+|.|+.|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------~~~~C~~~ 46 (46)
T 2ep3_A 6 SGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGE----------KPSGPSSG 46 (46)
T ss_dssp SSSCCCSEECSSSCCEESSHHHHHHHHTTTTTS----------CCCCTTCC
T ss_pred CCCCCCCeECCCCCchhCCHHHHHHHHHHcCCC----------CCCCCCCC
Confidence 35677899999996 34444443 89999987
No 388
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=88.86 E-value=0.31 Score=55.29 Aligned_cols=28 Identities=21% Similarity=0.376 Sum_probs=25.3
Q ss_pred CCCeEEEEeCCcCCCchhhHHHHHHHHH
Q 048174 91 GKSNSILVSGESGAGKTETTKMIMRYLA 118 (1303)
Q Consensus 91 ~~~QsIiisGESGaGKTe~~k~i~~yLa 118 (1303)
+....|.|+|.||||||+.++.|...+.
T Consensus 78 ~~g~iigI~G~~GsGKSTl~~~L~~~l~ 105 (308)
T 1sq5_A 78 RIPYIISIAGSVAVGKSTTARVLQALLS 105 (308)
T ss_dssp CCCEEEEEEECTTSSHHHHHHHHHHHHT
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHh
Confidence 5678999999999999999999998875
No 389
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=88.84 E-value=0.18 Score=62.06 Aligned_cols=30 Identities=23% Similarity=0.408 Sum_probs=26.3
Q ss_pred CCCeEEEEeCCcCCCchhhHHHHHHHHHHH
Q 048174 91 GKSNSILVSGESGAGKTETTKMIMRYLAYL 120 (1303)
Q Consensus 91 ~~~QsIiisGESGaGKTe~~k~i~~yLa~~ 120 (1303)
.+.+.|+|.|.||||||+.++.|...|...
T Consensus 367 ~~G~iI~LiG~sGSGKSTLar~La~~L~~~ 396 (552)
T 3cr8_A 367 RQGFTVFFTGLSGAGKSTLARALAARLMEM 396 (552)
T ss_dssp GSCEEEEEEESSCHHHHHHHHHHHHHHHTT
T ss_pred ccceEEEEECCCCChHHHHHHHHHHhhccc
Confidence 467899999999999999999999988643
No 390
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=88.77 E-value=0.87 Score=35.20 Aligned_cols=34 Identities=29% Similarity=0.322 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 048174 972 LEETERRVYQLQDSLNRLLYCMSEQFSQLKMILRS 1006 (1303)
Q Consensus 972 l~e~E~~~~~Lq~el~~Le~kl~~le~El~~~l~q 1006 (1303)
+.++|.+...|+..+.+|+++++-|+.|++ +|+|
T Consensus 5 l~eLE~r~k~le~~naeLEervstLq~EN~-mLRq 38 (42)
T 2oqq_A 5 LSELENRVKDLENKNSELEERLSTLQNENQ-MLRH 38 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-HHHH
Confidence 456778888888888888888888999988 7776
No 391
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=88.75 E-value=5 Score=36.12 Aligned_cols=62 Identities=18% Similarity=0.182 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 933 LSAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRLLYCMSEQFSQLK 1001 (1303)
Q Consensus 933 L~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl~~le~El~ 1001 (1303)
+.+.+..|+.+.+....+++.++.++.+.+ +.....+..+..|+..+..|+..+...++.+.
T Consensus 4 ikkKm~~lk~e~d~a~~~~~~~e~~l~~~e-------~~~~~~E~ev~~L~kKiq~lE~eld~~ee~l~ 65 (81)
T 1ic2_A 4 IKKKMQMLKLDKENALDRAEQAEADKKAAE-------ERSKQLEDELVALQKKLKGTEDELDKYSESLK 65 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555555555554444443333 33344555566666666666666666665555
No 392
>3tqf_A HPR(Ser) kinase; transferase, hydrolase; 2.80A {Coxiella burnetii}
Probab=88.74 E-value=0.2 Score=52.11 Aligned_cols=24 Identities=25% Similarity=0.538 Sum_probs=21.4
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHH
Q 048174 92 KSNSILVSGESGAGKTETTKMIMR 115 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~ 115 (1303)
....|+|+|+||||||+.+..+++
T Consensus 15 ~G~gvli~G~SGaGKStlal~L~~ 38 (181)
T 3tqf_A 15 DKMGVLITGEANIGKSELSLALID 38 (181)
T ss_dssp TTEEEEEEESSSSSHHHHHHHHHH
T ss_pred CCEEEEEEcCCCCCHHHHHHHHHH
Confidence 357999999999999999988876
No 393
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=88.72 E-value=0.33 Score=50.80 Aligned_cols=35 Identities=29% Similarity=0.420 Sum_probs=27.4
Q ss_pred HHHHHHcCCCeEEEEeCCcCCCchhhHHHHHHHHH
Q 048174 84 YREMINEGKSNSILVSGESGAGKTETTKMIMRYLA 118 (1303)
Q Consensus 84 y~~m~~~~~~QsIiisGESGaGKTe~~k~i~~yLa 118 (1303)
....+..+....|+|+|++|+|||+.++.+.+.+.
T Consensus 29 l~~~l~~~~~~~~ll~G~~G~GKT~l~~~l~~~~~ 63 (226)
T 2chg_A 29 LKGYVERKNIPHLLFSGPPGTGKTATAIALARDLF 63 (226)
T ss_dssp HHHHHHTTCCCCEEEECSTTSSHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCeEEEECCCCCCHHHHHHHHHHHHh
Confidence 33444555555699999999999999999998874
No 394
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.68 E-value=0.092 Score=41.07 Aligned_cols=30 Identities=17% Similarity=0.209 Sum_probs=22.0
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+.+|+|..|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~----------k~~~C~~c 46 (46)
T 2emh_A 6 SGTGERPYICTVCGKAFTDRSNLIKHQKIHTGE----------KPSGPSSG 46 (46)
T ss_dssp SCSCCCSEECTTTCCEESSHHHHHHHHHHHHCS----------SCSSSCCC
T ss_pred CCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCC----------CCCCCCCC
Confidence 35677899999996 33344444 89999998
No 395
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=88.65 E-value=0.42 Score=50.53 Aligned_cols=31 Identities=26% Similarity=0.386 Sum_probs=25.5
Q ss_pred HcCCCeEEEEeCCcCCCchhhHHHHHHHHHH
Q 048174 89 NEGKSNSILVSGESGAGKTETTKMIMRYLAY 119 (1303)
Q Consensus 89 ~~~~~QsIiisGESGaGKTe~~k~i~~yLa~ 119 (1303)
..+.+..|+|+|++|+|||+.++.+.+.+..
T Consensus 41 ~~~~~~~~ll~G~~G~GKT~l~~~~~~~~~~ 71 (250)
T 1njg_A 41 LGRIHHAYLFSGTRGVGKTSIARLLAKGLNC 71 (250)
T ss_dssp HTCCCSEEEEECSTTSCHHHHHHHHHHHHHC
T ss_pred cCCCCeEEEEECCCCCCHHHHHHHHHHHhcC
Confidence 3444569999999999999999999887753
No 396
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25
Probab=88.64 E-value=0.2 Score=52.06 Aligned_cols=22 Identities=27% Similarity=0.539 Sum_probs=20.1
Q ss_pred eEEEEeCCcCCCchhhHHHHHH
Q 048174 94 NSILVSGESGAGKTETTKMIMR 115 (1303)
Q Consensus 94 QsIiisGESGaGKTe~~k~i~~ 115 (1303)
..|+|.|.||||||+.++.|..
T Consensus 3 ~ii~l~G~~GaGKSTl~~~L~~ 24 (189)
T 2bdt_A 3 KLYIITGPAGVGKSTTCKRLAA 24 (189)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCCcHHHHHHHHhc
Confidence 5789999999999999999976
No 397
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=88.63 E-value=0.17 Score=51.63 Aligned_cols=25 Identities=28% Similarity=0.519 Sum_probs=21.7
Q ss_pred CeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 93 SNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 93 ~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
...|+|.|.||||||+.++.+...|
T Consensus 4 ~~~i~l~G~~GsGKSTl~~~La~~l 28 (173)
T 1kag_A 4 KRNIFLVGPMGAGKSTIGRQLAQQL 28 (173)
T ss_dssp CCCEEEECCTTSCHHHHHHHHHHHT
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHh
Confidence 3579999999999999999887765
No 398
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=88.58 E-value=0.11 Score=54.99 Aligned_cols=25 Identities=24% Similarity=0.316 Sum_probs=22.6
Q ss_pred EEEEeCCcCCCchhhHHHHHHHHHH
Q 048174 95 SILVSGESGAGKTETTKMIMRYLAY 119 (1303)
Q Consensus 95 sIiisGESGaGKTe~~k~i~~yLa~ 119 (1303)
-|+|.|.||||||+.++.+.++|..
T Consensus 2 ~I~i~G~~GsGKsTl~~~L~~~l~~ 26 (214)
T 1gtv_A 2 LIAIEGVDGAGKRTLVEKLSGAFRA 26 (214)
T ss_dssp EEEEEEEEEEEHHHHHHHHHHHHHE
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHh
Confidence 5899999999999999999998853
No 399
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A*
Probab=88.57 E-value=0.24 Score=50.93 Aligned_cols=21 Identities=29% Similarity=0.491 Sum_probs=19.1
Q ss_pred CCeEEEEeCCcCCCchhhHHH
Q 048174 92 KSNSILVSGESGAGKTETTKM 112 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~ 112 (1303)
+...+.|.|+||||||+.+|.
T Consensus 8 ~gei~~l~G~nGsGKSTl~~~ 28 (171)
T 4gp7_A 8 ELSLVVLIGSSGSGKSTFAKK 28 (171)
T ss_dssp SSEEEEEECCTTSCHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHH
Confidence 467899999999999999996
No 400
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=88.55 E-value=0.22 Score=54.26 Aligned_cols=32 Identities=22% Similarity=0.403 Sum_probs=23.6
Q ss_pred HHHHHHcCCCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 84 YREMINEGKSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 84 y~~m~~~~~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
+..|.. +...|+|.|.+|||||+.++.|.+.|
T Consensus 20 ~~~~~~--~~~~i~l~G~~GsGKSTl~k~La~~l 51 (246)
T 2bbw_A 20 FQSMAS--KLLRAVILGPPGSGKGTVCQRIAQNF 51 (246)
T ss_dssp --------CCCEEEEECCTTSSHHHHHHHHHHHH
T ss_pred HHHhcC--CCcEEEEECCCCCCHHHHHHHHHHHh
Confidence 344543 35799999999999999999999876
No 401
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.48 E-value=0.086 Score=41.38 Aligned_cols=30 Identities=17% Similarity=0.264 Sum_probs=21.9
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+++|+|+.|+ |...+.++ +||+|++|
T Consensus 6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------~~~~C~~C 46 (46)
T 2ytm_A 6 SGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQ----------RPSGPSSG 46 (46)
T ss_dssp CCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSC----------CCCCCCCC
T ss_pred CCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCC----------CCCCCCCC
Confidence 45678899999996 33334433 89999998
No 402
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A*
Probab=88.46 E-value=0.32 Score=55.24 Aligned_cols=46 Identities=20% Similarity=0.183 Sum_probs=33.2
Q ss_pred CchHHHHHHHHHHHHHHcC--CCeEEEEeCCcCCCchhhHHHHHHHHHHH
Q 048174 73 SPHVFAIADAAYREMINEG--KSNSILVSGESGAGKTETTKMIMRYLAYL 120 (1303)
Q Consensus 73 ~PHifavA~~Ay~~m~~~~--~~QsIiisGESGaGKTe~~k~i~~yLa~~ 120 (1303)
+.|..+.+ +.+.+.... ....|+|.|++|+|||+.++.|.+++...
T Consensus 17 ~~~~~a~~--~~~~~~~~~~~~~~~lll~G~~GtGKT~la~~i~~~~~~~ 64 (324)
T 1l8q_A 17 EGNRLAYE--VVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKR 64 (324)
T ss_dssp TTTHHHHH--HHHHHHHTTTTSCSSEEEECSSSSSHHHHHHHHHHHHHHT
T ss_pred CcHHHHHH--HHHHHHhCcCCCCCeEEEECCCCCcHHHHHHHHHHHHHHC
Confidence 34555443 344444443 46799999999999999999999988643
No 403
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=88.46 E-value=6.1 Score=35.47 Aligned_cols=64 Identities=17% Similarity=0.206 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 926 EEEKIENLSAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRLLYCMSEQ 996 (1303)
Q Consensus 926 ~~~ki~~L~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl~~l 996 (1303)
.+.+|+.+-..+..|+.++++|+.++..+..+..+++...+ .+...+.+|+++...-++++..|
T Consensus 11 LE~KIq~avdtI~lLqmEieELKekN~~L~~e~~e~~~~~~-------~L~~en~qLk~E~~~wq~Rl~~L 74 (81)
T 2jee_A 11 LEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQRE-------ELERENNHLKEQQNGWQERLQAL 74 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH-------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677777777777777777777776666665555443322 23344555555555555555444
No 404
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A*
Probab=88.45 E-value=0.24 Score=57.95 Aligned_cols=31 Identities=32% Similarity=0.549 Sum_probs=27.3
Q ss_pred cCCCeEEEEeCCcCCCchhhHHHHHHHHHHH
Q 048174 90 EGKSNSILVSGESGAGKTETTKMIMRYLAYL 120 (1303)
Q Consensus 90 ~~~~QsIiisGESGaGKTe~~k~i~~yLa~~ 120 (1303)
-...+.|+|+|.||||||++.+.++.++..-
T Consensus 133 ~~~g~~i~ivG~~GsGKTTll~~l~~~~~~~ 163 (372)
T 2ewv_A 133 HRKMGLILVTGPTGSGKSTTIASMIDYINQT 163 (372)
T ss_dssp TSSSEEEEEECSSSSSHHHHHHHHHHHHHHH
T ss_pred hcCCCEEEEECCCCCCHHHHHHHHHhhcCcC
Confidence 4567899999999999999999999998654
No 405
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=88.40 E-value=0.18 Score=54.37 Aligned_cols=26 Identities=23% Similarity=0.376 Sum_probs=17.1
Q ss_pred CCeEEEEeCCcCCCchhhHHHHH-HHH
Q 048174 92 KSNSILVSGESGAGKTETTKMIM-RYL 117 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~-~yL 117 (1303)
..+.|.|.|.||||||+.++.|+ ..+
T Consensus 26 ~G~ii~l~Gp~GsGKSTl~~~L~~~~~ 52 (231)
T 3lnc_A 26 VGVILVLSSPSGCGKTTVANKLLEKQK 52 (231)
T ss_dssp CCCEEEEECSCC----CHHHHHHC---
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhcCC
Confidence 45789999999999999999998 765
No 406
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=88.34 E-value=5.1 Score=35.19 Aligned_cols=45 Identities=18% Similarity=0.195 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 926 EEEKIENLSAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLK 970 (1303)
Q Consensus 926 ~~~ki~~L~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~ 970 (1303)
...+++.++.++..|+..+..++.++++...+-..++.++..+.+
T Consensus 5 ~~~kLq~~E~~N~~Le~~v~~le~~Le~s~~~q~~~~~Elk~~~e 49 (72)
T 3cve_A 5 SHMKLQEVEIRNKDLEGQLSEMEQRLEKSQSEQDAFRSNLKTLLE 49 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777777788888887777777777766555555544444444
No 407
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=88.34 E-value=0.29 Score=56.15 Aligned_cols=33 Identities=30% Similarity=0.386 Sum_probs=28.6
Q ss_pred cCCCeEEEEeCCcCCCchhhHHHHHHHHHHHhC
Q 048174 90 EGKSNSILVSGESGAGKTETTKMIMRYLAYLGG 122 (1303)
Q Consensus 90 ~~~~QsIiisGESGaGKTe~~k~i~~yLa~~~~ 122 (1303)
..+...|.|.|+||||||++++.|..++...++
T Consensus 126 ~~~g~vi~lvG~nGaGKTTll~~Lag~l~~~~g 158 (328)
T 3e70_C 126 AEKPYVIMFVGFNGSGKTTTIAKLANWLKNHGF 158 (328)
T ss_dssp SCSSEEEEEECCTTSSHHHHHHHHHHHHHHTTC
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHHHhcCC
Confidence 456899999999999999999999999876543
No 408
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=88.33 E-value=0.23 Score=51.30 Aligned_cols=25 Identities=28% Similarity=0.384 Sum_probs=22.4
Q ss_pred CeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 93 SNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 93 ~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
...|+|+|.+|||||+.++.+-+.|
T Consensus 5 ~~~i~l~G~~GsGKst~a~~La~~l 29 (185)
T 3trf_A 5 LTNIYLIGLMGAGKTSVGSQLAKLT 29 (185)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHh
Confidence 4589999999999999999998776
No 409
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A*
Probab=88.26 E-value=0.24 Score=52.99 Aligned_cols=25 Identities=36% Similarity=0.482 Sum_probs=22.5
Q ss_pred CeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 93 SNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 93 ~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
...|.|.|.||||||+.++.+.+.+
T Consensus 5 ~~~i~i~G~~GsGKSTl~~~L~~~~ 29 (227)
T 1cke_A 5 APVITIDGPSGAGKGTLCKAMAEAL 29 (227)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHh
Confidence 4589999999999999999998865
No 410
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A*
Probab=88.26 E-value=0.45 Score=53.16 Aligned_cols=27 Identities=30% Similarity=0.513 Sum_probs=24.3
Q ss_pred CCCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 91 GKSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 91 ~~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
..+.+|+|.|++|+|||+.++.+.+.+
T Consensus 48 ~~~~~vll~G~~GtGKT~la~~la~~l 74 (310)
T 1ofh_A 48 VTPKNILMIGPTGVGKTEIARRLAKLA 74 (310)
T ss_dssp CCCCCEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCCceEEEECCCCCCHHHHHHHHHHHh
Confidence 457899999999999999999998876
No 411
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=88.25 E-value=2.1 Score=39.41 Aligned_cols=64 Identities=2% Similarity=-0.076 Sum_probs=46.8
Q ss_pred HHHHHHHH-HhhHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhh
Q 048174 835 RGQEITES-QESQEAVQYIVDETSEVKECDITNKGIEVHVKECDTTDRAIEVYVKECDTKDRATEVHV 901 (1303)
Q Consensus 835 LE~kl~eL-~rLe~ee~~r~eee~~~~E~~kL~~~ve~Le~qlee~e~~~~~le~e~~~~~~~~~~~~ 901 (1303)
++.++..+ ..++.++..+.+ ......+|..+..+|..++.++++++..+...+..++.++.++.
T Consensus 19 ~eeel~~lke~l~k~e~~rke---le~~~~~l~~ek~~L~~ql~eaEe~~~~L~~~K~eLE~~l~el~ 83 (89)
T 3bas_A 19 QLKQMDKMKEDLAKTERIKKE---LEEQNVTLLEQKNDLFGSMKQLEDKVEELLSKNYHLENEVARLK 83 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777777 788777777777 66677788888888888888888888887777665555444433
No 412
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=88.22 E-value=0.26 Score=51.03 Aligned_cols=28 Identities=25% Similarity=0.163 Sum_probs=24.6
Q ss_pred eEEEEeCCcCCCchhhHHHHHHHHHHHh
Q 048174 94 NSILVSGESGAGKTETTKMIMRYLAYLG 121 (1303)
Q Consensus 94 QsIiisGESGaGKTe~~k~i~~yLa~~~ 121 (1303)
..|.|+|.||||||+.+..++.+|...+
T Consensus 5 ~~i~i~G~sGsGKTTl~~~L~~~l~~~g 32 (169)
T 1xjc_A 5 NVWQVVGYKHSGKTTLMEKWVAAAVREG 32 (169)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHTT
T ss_pred EEEEEECCCCCCHHHHHHHHHHhhHhcC
Confidence 4789999999999999999999987543
No 413
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=88.13 E-value=0.18 Score=50.93 Aligned_cols=21 Identities=38% Similarity=0.737 Sum_probs=18.9
Q ss_pred EEEEeCCcCCCchhhHHHHHHH
Q 048174 95 SILVSGESGAGKTETTKMIMRY 116 (1303)
Q Consensus 95 sIiisGESGaGKTe~~k~i~~y 116 (1303)
-|+|+|.+|||||+.++.+ +.
T Consensus 3 ~I~l~G~~GsGKsT~a~~L-~~ 23 (179)
T 3lw7_A 3 VILITGMPGSGKSEFAKLL-KE 23 (179)
T ss_dssp EEEEECCTTSCHHHHHHHH-HH
T ss_pred EEEEECCCCCCHHHHHHHH-HH
Confidence 5899999999999999988 44
No 414
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.12 E-value=0.086 Score=41.32 Aligned_cols=31 Identities=16% Similarity=0.161 Sum_probs=22.7
Q ss_pred cccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1081 SMEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1081 ~~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
..+..+.+|+|..|+ |...+.++ +||+|++|
T Consensus 5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------k~~~C~~C 46 (46)
T 2ytt_A 5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTRE----------KPSGPSSG 46 (46)
T ss_dssp SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHC----------CCCSCCCC
T ss_pred CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCC----------CCCCCCCC
Confidence 345678899999996 33444443 89999998
No 415
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=87.89 E-value=0.5 Score=54.10 Aligned_cols=57 Identities=26% Similarity=0.430 Sum_probs=37.1
Q ss_pred HHHHhcCCCCCCCCchHHHHHHHHHHHHHHcCCCeEEEEeCCcCCCchhhHHHHHHHHH
Q 048174 60 MMERYKGVPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLA 118 (1303)
Q Consensus 60 ~~~~y~~~~~~~~~PHifavA~~Ay~~m~~~~~~QsIiisGESGaGKTe~~k~i~~yLa 118 (1303)
+.+.|+-..+.+.-.|--.+ ......+..++-..+++.|++|+|||+.++.+.+.+.
T Consensus 15 ~~~k~rp~~~~~~~g~~~~~--~~L~~~i~~g~~~~~ll~Gp~G~GKTtla~~la~~l~ 71 (340)
T 1sxj_C 15 WVEKYRPETLDEVYGQNEVI--TTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIY 71 (340)
T ss_dssp HHHHTCCSSGGGCCSCHHHH--HHHHHHHHTTCCCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred hHHHhCCCcHHHhcCcHHHH--HHHHHHHhcCCCceEEEECCCCCCHHHHHHHHHHHHc
Confidence 45667655544443332222 2344445555433499999999999999999999875
No 416
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=87.80 E-value=0.24 Score=51.79 Aligned_cols=24 Identities=33% Similarity=0.489 Sum_probs=21.7
Q ss_pred EEEEeCCcCCCchhhHHHHHHHHH
Q 048174 95 SILVSGESGAGKTETTKMIMRYLA 118 (1303)
Q Consensus 95 sIiisGESGaGKTe~~k~i~~yLa 118 (1303)
-|+|.|.+|||||+.++.+.++|-
T Consensus 2 ~I~i~G~~GsGKsT~~~~L~~~l~ 25 (205)
T 2jaq_A 2 KIAIFGTVGAGKSTISAEISKKLG 25 (205)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHC
T ss_pred EEEEECCCccCHHHHHHHHHHhcC
Confidence 589999999999999999988763
No 417
>1svm_A Large T antigen; AAA+ fold, viral protein; HET: ATP; 1.94A {Simian virus 40} SCOP: c.37.1.20 PDB: 1svl_A* 1svo_A 1n25_A 2h1l_A
Probab=87.78 E-value=0.51 Score=55.22 Aligned_cols=47 Identities=21% Similarity=0.246 Sum_probs=37.5
Q ss_pred CCCchHHHHHHHHHHHHH-HcCCCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 71 KLSPHVFAIADAAYREMI-NEGKSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 71 ~~~PHifavA~~Ay~~m~-~~~~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
.+-|++......+++.+. .-.....|+|.|.+|||||+.++.|...+
T Consensus 146 ~l~~~~~~~~~~~l~~~~~~i~~~~~i~l~G~~GsGKSTl~~~l~~~~ 193 (377)
T 1svm_A 146 CLLPKMDSVVYDFLKCMVYNIPKKRYWLFKGPIDSGKTTLAAALLELC 193 (377)
T ss_dssp TTSTTHHHHHHHHHHHHHHCCTTCCEEEEECSTTSSHHHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHHHhcccccCCCCEEEEECCCCCCHHHHHHHHHhhc
Confidence 345777777777887774 34567899999999999999999998754
No 418
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=87.77 E-value=0.25 Score=50.33 Aligned_cols=23 Identities=30% Similarity=0.527 Sum_probs=21.0
Q ss_pred EEEEeCCcCCCchhhHHHHHHHH
Q 048174 95 SILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 95 sIiisGESGaGKTe~~k~i~~yL 117 (1303)
.|+|+|.+|||||+.++.+-+.|
T Consensus 4 ~I~l~G~~GsGKsT~a~~La~~l 26 (173)
T 1e6c_A 4 PIFMVGARGCGMTTVGRELARAL 26 (173)
T ss_dssp CEEEESCTTSSHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHh
Confidence 59999999999999999988765
No 419
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.72 E-value=0.23 Score=39.67 Aligned_cols=26 Identities=35% Similarity=0.575 Sum_probs=23.3
Q ss_pred CccccCccccccCccccchhHHhhcc
Q 048174 1114 KNYNCSFCRREFRSAQALGGHMNVHR 1139 (1303)
Q Consensus 1114 ~~~~c~~c~~~f~~~~~l~~h~~~h~ 1139 (1303)
-+|.|+-|++.|....+|.+||+---
T Consensus 11 ~~~~CPrCn~~f~~~~sLr~HmkycC 36 (49)
T 2e72_A 11 GRKICPRCNAQFRVTEALRGHMCYCC 36 (49)
T ss_dssp SCCCCTTTCCCCSSHHHHHHHHHHHC
T ss_pred CceeCCcccccccchHHHHhhhhhcC
Confidence 57999999999999999999998443
No 420
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=87.68 E-value=0.25 Score=50.08 Aligned_cols=23 Identities=26% Similarity=0.369 Sum_probs=21.1
Q ss_pred EEEEeCCcCCCchhhHHHHHHHH
Q 048174 95 SILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 95 sIiisGESGaGKTe~~k~i~~yL 117 (1303)
.|+|+|.+|||||+.++.+-+.|
T Consensus 2 ~I~l~G~~GsGKsT~a~~L~~~l 24 (168)
T 2pt5_A 2 RIYLIGFMCSGKSTVGSLLSRSL 24 (168)
T ss_dssp EEEEESCTTSCHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHh
Confidence 59999999999999999998875
No 421
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=87.65 E-value=8.3 Score=35.16 Aligned_cols=79 Identities=10% Similarity=0.064 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 048174 926 EEEKIENLSAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRLLYCMSEQFSQLKMILR 1005 (1303)
Q Consensus 926 ~~~ki~~L~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl~~le~El~~~l~ 1005 (1303)
...++..+..+++.|..+++.++..+++...++.+...........+..+..-++.+--....|+.++..|.+|+. -|+
T Consensus 5 Lr~qi~~l~~e~~~l~~e~dn~~~~~edfk~KyE~E~~~R~~~E~d~~~LrkdvD~a~l~r~dLE~kvesL~eEl~-fLk 83 (86)
T 3swk_A 5 LRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIA-FLK 83 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHH-HHT
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-HHh
Confidence 5677888888888888888888888877777765554444444445555555555666666778888888888887 665
No 422
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=87.65 E-value=0.31 Score=50.51 Aligned_cols=29 Identities=24% Similarity=0.331 Sum_probs=25.6
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHHHHHHH
Q 048174 92 KSNSILVSGESGAGKTETTKMIMRYLAYL 120 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~yLa~~ 120 (1303)
....|+|.|.+|||||+.++.+..+|...
T Consensus 12 ~~~~i~l~G~~GsGKsT~~~~L~~~l~~~ 40 (186)
T 2yvu_A 12 KGIVVWLTGLPGSGKTTIATRLADLLQKE 40 (186)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHHHHHT
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHHhc
Confidence 46789999999999999999999988643
No 423
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A*
Probab=87.63 E-value=0.28 Score=55.70 Aligned_cols=29 Identities=21% Similarity=0.376 Sum_probs=26.5
Q ss_pred HcCCCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 89 NEGKSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 89 ~~~~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
.-...++|.|.|+||||||+.++.|+.++
T Consensus 122 ~i~~Ge~vaIvGpsGsGKSTLl~lL~gl~ 150 (305)
T 2v9p_A 122 GIPKKNCLAFIGPPNTGKSMLCNSLIHFL 150 (305)
T ss_dssp TCTTCSEEEEECSSSSSHHHHHHHHHHHH
T ss_pred EecCCCEEEEECCCCCcHHHHHHHHhhhc
Confidence 34678899999999999999999999998
No 424
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=87.62 E-value=15 Score=34.04 Aligned_cols=91 Identities=15% Similarity=0.110 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhhcchhhhhhccCCCccCcccCchhHHHHHHHHHHHHHHH
Q 048174 861 ECDITNKGIEVHVKECDTTDRAIEVYVKECDTKDRATEVHVEDCDDIDRAIEPHPITGKIPCSNEEEEKIENLSAEVEKL 940 (1303)
Q Consensus 861 E~~kL~~~ve~Le~qlee~e~~~~~le~e~~~~~~~~~~~~ee~~~~k~~l~e~~~~~e~~~~~~~~~ki~~L~~E~~kL 940 (1303)
+..+++.++..++.++...+..+..+..+.. .+...-...+.++..+
T Consensus 6 ~~e~lre~l~~le~~~~~~~~e~~~L~~~l~---------------------------------eE~~~R~~aE~~~~~i 52 (97)
T 2eqb_B 6 NYNQLKEDYNTLKRELSDRDDEVKRLREDIA---------------------------------KENELRTKAEEEADKL 52 (97)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------------------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH---------------------------------HHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 941 KALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRLL 990 (1303)
Q Consensus 941 e~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le 990 (1303)
+.++++|...+-+ +..+....-...-...+.++.+|+.++....
T Consensus 53 e~ElEeLTasLFe------EAN~MVa~ar~e~~~~e~kn~~L~~qL~d~d 96 (97)
T 2eqb_B 53 NKEVEDLTASLFD------EANNMVADARKEKYAIEILNKRLTEQLREKD 96 (97)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
No 425
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=87.59 E-value=11 Score=35.38 Aligned_cols=26 Identities=23% Similarity=0.224 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 965 SEKRLKKLEETERRVYQLQDSLNRLL 990 (1303)
Q Consensus 965 ~~~l~~kl~e~E~~~~~Lq~el~~Le 990 (1303)
++...+...+.|..+..|...+.-|+
T Consensus 74 Le~~ek~~~~AE~evasLnRriqllE 99 (101)
T 3u59_A 74 LEQAEKKATDAEAEVASLNRRIQLVE 99 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 33334445556666666666666554
No 426
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.59 E-value=0.15 Score=45.17 Aligned_cols=30 Identities=23% Similarity=0.297 Sum_probs=26.2
Q ss_pred CCCccccCccccccCccccchhHHhhcchhhh
Q 048174 1112 PPKNYNCSFCRREFRSAQALGGHMNVHRRDRA 1143 (1303)
Q Consensus 1112 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~ 1143 (1303)
+.|||.|++|++.|. ...|..|+ .|.+++-
T Consensus 14 ~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~ 43 (75)
T 2d9k_A 14 PLRLAVCQHCDLELS-ILKLKEHE-DYCGART 43 (75)
T ss_dssp CCCCEECSSSCCEEC-HHHHHHHH-HHHHHCE
T ss_pred CCcccCCcccChHhh-HHHHHHHH-hHcCCCc
Confidence 459999999999995 89999999 8998754
No 427
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A*
Probab=87.49 E-value=0.32 Score=53.10 Aligned_cols=27 Identities=33% Similarity=0.393 Sum_probs=23.8
Q ss_pred CCCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 91 GKSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 91 ~~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
.....|-|.|.+|||||+.+|.|...+
T Consensus 23 ~~g~iigI~G~~GsGKSTl~k~L~~~l 49 (245)
T 2jeo_A 23 MRPFLIGVSGGTASGKSTVCEKIMELL 49 (245)
T ss_dssp CCSEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHh
Confidence 456789999999999999999988876
No 428
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=87.45 E-value=0.28 Score=50.60 Aligned_cols=25 Identities=24% Similarity=0.456 Sum_probs=22.5
Q ss_pred CeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 93 SNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 93 ~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
...|+|.|.+|||||+.++.+.+.|
T Consensus 4 g~~I~l~G~~GsGKST~~~~La~~l 28 (186)
T 3cm0_A 4 GQAVIFLGPPGAGKGTQASRLAQEL 28 (186)
T ss_dssp EEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHh
Confidence 4589999999999999999998765
No 429
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=87.38 E-value=0.32 Score=55.24 Aligned_cols=30 Identities=43% Similarity=0.643 Sum_probs=26.4
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHHHHHHHh
Q 048174 92 KSNSILVSGESGAGKTETTKMIMRYLAYLG 121 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~yLa~~~ 121 (1303)
..+.|.|.|.||||||++++.|..++..-+
T Consensus 101 ~g~vi~lvG~nGsGKTTll~~Lagll~~~~ 130 (304)
T 1rj9_A 101 KGRVVLVVGVNGVGKTTTIAKLGRYYQNLG 130 (304)
T ss_dssp SSSEEEEECSTTSSHHHHHHHHHHHHHTTT
T ss_pred CCeEEEEECCCCCcHHHHHHHHHHHHHhcC
Confidence 567999999999999999999999987543
No 430
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=87.24 E-value=0.36 Score=54.74 Aligned_cols=30 Identities=30% Similarity=0.453 Sum_probs=26.4
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHHHHHHHh
Q 048174 92 KSNSILVSGESGAGKTETTKMIMRYLAYLG 121 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~yLa~~~ 121 (1303)
....|.|.|++|||||++.+.|..++..-+
T Consensus 99 ~g~vi~lvG~nGsGKTTll~~Lag~l~~~~ 128 (302)
T 3b9q_A 99 KPAVIMIVGVNGGGKTTSLGKLAHRLKNEG 128 (302)
T ss_dssp SCEEEEEECCTTSCHHHHHHHHHHHHHHTT
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHHHcC
Confidence 467999999999999999999999987543
No 431
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=87.16 E-value=0.28 Score=50.68 Aligned_cols=23 Identities=22% Similarity=0.449 Sum_probs=21.0
Q ss_pred EEEEeCCcCCCchhhHHHHHHHH
Q 048174 95 SILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 95 sIiisGESGaGKTe~~k~i~~yL 117 (1303)
.|+|+|.+|||||+.++.+-+.|
T Consensus 4 ~I~l~G~~GsGKsT~a~~La~~l 26 (184)
T 2iyv_A 4 KAVLVGLPGSGKSTIGRRLAKAL 26 (184)
T ss_dssp SEEEECSTTSSHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHc
Confidence 49999999999999999998865
No 432
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=87.15 E-value=0.85 Score=51.22 Aligned_cols=57 Identities=19% Similarity=0.383 Sum_probs=37.9
Q ss_pred HHHHhcCCCCCCCCchHHHHHHHHHHHHHHcCCCeEEEEeCCcCCCchhhHHHHHHHHH
Q 048174 60 MMERYKGVPFGKLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLA 118 (1303)
Q Consensus 60 ~~~~y~~~~~~~~~PHifavA~~Ay~~m~~~~~~QsIiisGESGaGKTe~~k~i~~yLa 118 (1303)
+.+.|+-..+.++.-|--.+ .....++..+....++|+|++|+|||+.++.+.+.+.
T Consensus 15 ~~~k~~p~~~~~~~g~~~~~--~~l~~~l~~~~~~~~ll~G~~G~GKT~la~~l~~~l~ 71 (327)
T 1iqp_A 15 WVEKYRPQRLDDIVGQEHIV--KRLKHYVKTGSMPHLLFAGPPGVGKTTAALALARELF 71 (327)
T ss_dssp HHHHTCCCSTTTCCSCHHHH--HHHHHHHHHTCCCEEEEESCTTSSHHHHHHHHHHHHH
T ss_pred hhhccCCCCHHHhhCCHHHH--HHHHHHHHcCCCCeEEEECcCCCCHHHHHHHHHHHhc
Confidence 45567655555543332222 2334455556655699999999999999999998874
No 433
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=87.08 E-value=0.28 Score=50.32 Aligned_cols=23 Identities=26% Similarity=0.472 Sum_probs=20.9
Q ss_pred EEEEeCCcCCCchhhHHHHHHHH
Q 048174 95 SILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 95 sIiisGESGaGKTe~~k~i~~yL 117 (1303)
.|+|.|.+|||||+.++.|-+.|
T Consensus 6 ~i~i~G~~GsGKsTla~~La~~l 28 (175)
T 1via_A 6 NIVFIGFMGSGKSTLARALAKDL 28 (175)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHHHc
Confidence 59999999999999999998765
No 434
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=87.01 E-value=0.59 Score=53.95 Aligned_cols=37 Identities=16% Similarity=0.235 Sum_probs=28.8
Q ss_pred HHHHHHHHcCCCe--EEEEeCCcCCCchhhHHHHHHHHH
Q 048174 82 AAYREMINEGKSN--SILVSGESGAGKTETTKMIMRYLA 118 (1303)
Q Consensus 82 ~Ay~~m~~~~~~Q--sIiisGESGaGKTe~~k~i~~yLa 118 (1303)
.+.........+. +|+|+|++|+|||+.++.+.+.+.
T Consensus 31 ~~l~~~~~~~~~~~~~~li~G~~G~GKTtl~~~l~~~~~ 69 (389)
T 1fnn_A 31 ILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYK 69 (389)
T ss_dssp HHHHHHHHSTTSSCCEEEEECCTTSSHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCCCCCeEEEECCCCCCHHHHHHHHHHHHh
Confidence 3444445556667 999999999999999998887653
No 435
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A*
Probab=86.98 E-value=0.5 Score=52.17 Aligned_cols=28 Identities=25% Similarity=0.247 Sum_probs=24.5
Q ss_pred cCCCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 90 EGKSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 90 ~~~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
.....+|+|.|++|+|||..++.+.+.+
T Consensus 61 ~~~~~~vLl~G~~GtGKT~la~~ia~~~ 88 (272)
T 1d2n_A 61 RTPLVSVLLEGPPHSGKTALAAKIAEES 88 (272)
T ss_dssp SCSEEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCCCcHHHHHHHHHHHh
Confidence 4567899999999999999999988764
No 436
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=86.97 E-value=0.39 Score=59.01 Aligned_cols=50 Identities=18% Similarity=0.353 Sum_probs=35.2
Q ss_pred CCCCchHHH---HHHHHHHHHH-HcCCCeEEEEeCCcCCCchhhHHHHHHHHHH
Q 048174 70 GKLSPHVFA---IADAAYREMI-NEGKSNSILVSGESGAGKTETTKMIMRYLAY 119 (1303)
Q Consensus 70 ~~~~PHifa---vA~~Ay~~m~-~~~~~QsIiisGESGaGKTe~~k~i~~yLa~ 119 (1303)
+..+||-|. |+......+. ..+....|+++|-+|||||+.++.+.+.|..
T Consensus 345 g~~~p~~~~r~eV~~~lr~~~~~~~~~~~~I~l~G~~GsGKSTia~~La~~L~~ 398 (546)
T 2gks_A 345 GRKLPEWFTRPEVAEILAETYVPKHKQGFCVWLTGLPCAGKSTIAEILATMLQA 398 (546)
T ss_dssp TCCCCTTTSCHHHHHHHHHHSCCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred CCCCCccccchhHHHHHHHhhccccccceEEEccCCCCCCHHHHHHHHHHHhhh
Confidence 456677665 5533322221 2344678999999999999999999988764
No 437
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=86.97 E-value=0.23 Score=49.60 Aligned_cols=25 Identities=12% Similarity=0.377 Sum_probs=21.1
Q ss_pred CCCeEEEEeCCcCCCchhhHHHHHH
Q 048174 91 GKSNSILVSGESGAGKTETTKMIMR 115 (1303)
Q Consensus 91 ~~~QsIiisGESGaGKTe~~k~i~~ 115 (1303)
..+..|+|.||+|+|||..++.|-+
T Consensus 22 ~~~~~vll~G~~GtGKt~lA~~i~~ 46 (145)
T 3n70_A 22 ETDIAVWLYGAPGTGRMTGARYLHQ 46 (145)
T ss_dssp TCCSCEEEESSTTSSHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCHHHHHHHHHH
Confidence 4567899999999999999887643
No 438
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis}
Probab=86.96 E-value=0.15 Score=59.35 Aligned_cols=27 Identities=37% Similarity=0.604 Sum_probs=23.7
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHHHHH
Q 048174 92 KSNSILVSGESGAGKTETTKMIMRYLA 118 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~yLa 118 (1303)
..+.|+|+|+||||||+..+.|+.++.
T Consensus 174 ~G~~i~ivG~sGsGKSTll~~l~~~~~ 200 (361)
T 2gza_A 174 LERVIVVAGETGSGKTTLMKALMQEIP 200 (361)
T ss_dssp TTCCEEEEESSSSCHHHHHHHHHTTSC
T ss_pred cCCEEEEECCCCCCHHHHHHHHHhcCC
Confidence 456999999999999999999988753
No 439
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=86.84 E-value=0.29 Score=50.83 Aligned_cols=26 Identities=27% Similarity=0.492 Sum_probs=23.0
Q ss_pred EEEEeCCcCCCchhhHHHHHHHHHHH
Q 048174 95 SILVSGESGAGKTETTKMIMRYLAYL 120 (1303)
Q Consensus 95 sIiisGESGaGKTe~~k~i~~yLa~~ 120 (1303)
-|+|.|-+|||||+.++.+.++|...
T Consensus 2 ~I~l~G~~GsGKsT~~~~L~~~l~~~ 27 (197)
T 2z0h_A 2 FITFEGIDGSGKSTQIQLLAQYLEKR 27 (197)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHC
Confidence 38999999999999999999988543
No 440
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=86.83 E-value=8.4 Score=34.58 Aligned_cols=68 Identities=16% Similarity=0.123 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 937 VEKLKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRLLYCMSEQFSQLKMIL 1004 (1303)
Q Consensus 937 ~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl~~le~El~~~l 1004 (1303)
..+|++.++.+-..+.-++.++.+++.....+.....++......|..++..|++....-++.+..+|
T Consensus 8 leqLE~KIq~avdtI~lLqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl~~LL 75 (81)
T 2jee_A 8 FEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALL 75 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566666666666666666666777776767777777777777788888888877777777776544
No 441
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.82 E-value=0.18 Score=39.38 Aligned_cols=30 Identities=17% Similarity=0.269 Sum_probs=21.9
Q ss_pred ccccccceecCCCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECEKCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+++|+|+.|+ |...+.++ +||+|++|
T Consensus 6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~----------k~~~C~~~ 46 (46)
T 2em2_A 6 SGSGEKPFKCKECGKAFRQNIHLASHLRIHTGE----------KPSGPSSG 46 (46)
T ss_dssp SCCCCCSEECSSSCCEESSHHHHHHHHHHHCCC----------CSSCSSCC
T ss_pred CCCCCCCEECCcCCchhCCHHHHHHHHHHhCCC----------CCCCCCCC
Confidence 35678899999996 33444444 89999987
No 442
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=86.78 E-value=0.18 Score=66.09 Aligned_cols=41 Identities=7% Similarity=-0.117 Sum_probs=26.1
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhhhHHhhhhhhhHHHHHHHH
Q 048174 784 ALSIQTSWRGHRDFSYYKRLRKASVFSQSRWRGIAARREFR 824 (1303)
Q Consensus 784 A~~IQ~~~Rg~~aRr~~~~~~kaav~IQ~~~R~~~aRkel~ 824 (1303)
|..++.++|+..++..+++...+++.+|+.||++.+++...
T Consensus 767 a~~Ll~WIr~k~a~l~~r~~~~sl~~IQ~~ir~f~~fr~~e 807 (995)
T 2ycu_A 767 ANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTE 807 (995)
T ss_dssp HHHHHHHTTTTTCCCSCHHHHHHHHHHHHHHHHHTTHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh
Confidence 34456666766666666666667777777777665555443
No 443
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis}
Probab=86.72 E-value=0.3 Score=53.71 Aligned_cols=27 Identities=37% Similarity=0.438 Sum_probs=23.3
Q ss_pred CCCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 91 GKSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 91 ~~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
.....|.|.|.||||||+.+|.|.+.|
T Consensus 25 ~~g~~I~I~G~~GsGKSTl~k~La~~L 51 (252)
T 4e22_A 25 AIAPVITVDGPSGAGKGTLCKALAESL 51 (252)
T ss_dssp TTSCEEEEECCTTSSHHHHHHHHHHHT
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHhc
Confidence 345689999999999999999998665
No 444
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=86.70 E-value=0.56 Score=54.17 Aligned_cols=39 Identities=28% Similarity=0.307 Sum_probs=32.1
Q ss_pred HHHHHHHHcCCCeEEEEeCCcCCCchhhHHHHHHHHHHH
Q 048174 82 AAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYL 120 (1303)
Q Consensus 82 ~Ay~~m~~~~~~QsIiisGESGaGKTe~~k~i~~yLa~~ 120 (1303)
.+...+...+...+|+|+|++|+|||..++.+.+.+...
T Consensus 34 ~~l~~~~~~~~~~~vll~G~~G~GKT~la~~l~~~~~~~ 72 (384)
T 2qby_B 34 IAIRYFVKNEVKFSNLFLGLTGTGKTFVSKYIFNEIEEV 72 (384)
T ss_dssp HHHHHHHTTCCCCEEEEEECTTSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCcEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 345555667778899999999999999999999987654
No 445
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=86.69 E-value=0.32 Score=49.64 Aligned_cols=22 Identities=27% Similarity=0.438 Sum_probs=20.2
Q ss_pred eEEEEeCCcCCCchhhHHHHHH
Q 048174 94 NSILVSGESGAGKTETTKMIMR 115 (1303)
Q Consensus 94 QsIiisGESGaGKTe~~k~i~~ 115 (1303)
..|+|+|.+|||||+.++.+.+
T Consensus 3 ~~I~i~G~~GsGKST~a~~L~~ 24 (181)
T 1ly1_A 3 KIILTIGCPGSGKSTWAREFIA 24 (181)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred eEEEEecCCCCCHHHHHHHHHh
Confidence 5799999999999999999887
No 446
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=86.59 E-value=0.29 Score=50.58 Aligned_cols=25 Identities=32% Similarity=0.514 Sum_probs=22.3
Q ss_pred CeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 93 SNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 93 ~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
...|+|+|.+|||||+.++.+.+.|
T Consensus 6 ~~~I~l~G~~GsGKsT~~~~L~~~l 30 (194)
T 1qf9_A 6 PNVVFVLGGPGSGKGTQCANIVRDF 30 (194)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHh
Confidence 3579999999999999999998875
No 447
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=86.53 E-value=11 Score=34.97 Aligned_cols=75 Identities=13% Similarity=0.137 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 927 EEKIENLSAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRLLYCMSEQFSQLK 1001 (1303)
Q Consensus 927 ~~ki~~L~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl~~le~El~ 1001 (1303)
...+..|..+-+.|-+++.++++.-..+..++..++.+...+.......-..++.++.++..+++.+..++.++.
T Consensus 10 ~~eL~~l~~eE~~L~~eL~~lEke~~~l~~el~~le~E~~~L~~eE~~~w~eyn~~~~ql~e~~dE~~Sl~~q~~ 84 (96)
T 3q8t_A 10 QRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLELDDELKSVENQMR 84 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555555556666555555555555555555555444444445566666666666666655555544
No 448
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=86.52 E-value=0.78 Score=50.02 Aligned_cols=28 Identities=14% Similarity=0.241 Sum_probs=24.3
Q ss_pred cCCCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 90 EGKSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 90 ~~~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
....=.|+|+|.+|||||+.++.+.+.+
T Consensus 26 ~~~~~~I~l~G~~GsGKsT~a~~L~~~~ 53 (243)
T 3tlx_A 26 SKPDGRYIFLGAPGSGKGTQSLNLKKSH 53 (243)
T ss_dssp TSCCEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred cCCCcEEEEECCCCCCHHHHHHHHHHHh
Confidence 3456689999999999999999998765
No 449
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=86.51 E-value=7.6 Score=36.67 Aligned_cols=21 Identities=10% Similarity=0.041 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 048174 980 YQLQDSLNRLLYCMSEQFSQL 1000 (1303)
Q Consensus 980 ~~Lq~el~~Le~kl~~le~El 1000 (1303)
.++..++..|++++..|+.++
T Consensus 86 Ekl~~eKe~L~~ql~~Lq~q~ 106 (110)
T 2v4h_A 86 EKLVEKKEYLQEQLEQLQREF 106 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHH
Confidence 344444444444444444443
No 450
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A*
Probab=86.44 E-value=0.18 Score=54.51 Aligned_cols=26 Identities=27% Similarity=0.526 Sum_probs=22.4
Q ss_pred CCCeEEEEeCCcCCCchhhHHHHHHH
Q 048174 91 GKSNSILVSGESGAGKTETTKMIMRY 116 (1303)
Q Consensus 91 ~~~QsIiisGESGaGKTe~~k~i~~y 116 (1303)
.+...|.|.|.+|||||+.++.|..+
T Consensus 18 ~~g~~i~i~G~~GsGKSTl~~~L~~~ 43 (230)
T 2vp4_A 18 TQPFTVLIEGNIGSGKTTYLNHFEKY 43 (230)
T ss_dssp CCCEEEEEECSTTSCHHHHHHTTGGG
T ss_pred CCceEEEEECCCCCCHHHHHHHHHhc
Confidence 35689999999999999998887665
No 451
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=86.40 E-value=0.32 Score=51.66 Aligned_cols=22 Identities=32% Similarity=0.510 Sum_probs=20.2
Q ss_pred EEEeCCcCCCchhhHHHHHHHH
Q 048174 96 ILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 96 IiisGESGaGKTe~~k~i~~yL 117 (1303)
|+|+|.+|||||+.++.+.+.+
T Consensus 3 I~l~G~~GsGKsT~a~~L~~~~ 24 (216)
T 3fb4_A 3 IVLMGLPGAGKGTQAEQIIEKY 24 (216)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 8999999999999999997765
No 452
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=86.25 E-value=0.23 Score=52.49 Aligned_cols=26 Identities=35% Similarity=0.401 Sum_probs=22.0
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 92 KSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
....|.|+|.||||||+.++.+...+
T Consensus 20 ~~~~i~i~G~~GsGKSTl~~~L~~~~ 45 (207)
T 2qt1_A 20 KTFIIGISGVTNSGKTTLAKNLQKHL 45 (207)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHTTS
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHhc
Confidence 45789999999999999988877653
No 453
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=86.22 E-value=11 Score=36.37 Aligned_cols=67 Identities=9% Similarity=0.094 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 927 EEKIENLSAEVEKLKALLQAEKQRADDSARKCA-------EARVLSEKRLKKLEETERRVYQLQDSLNRLLYCM 993 (1303)
Q Consensus 927 ~~ki~~L~~E~~kLe~~leel~~~~~ele~~~~-------e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl 993 (1303)
..++..+..+++.|..++..++..+++...++. .++..+..+.+.+.+.--....|+.++..|++.+
T Consensus 26 R~qid~~~~e~a~l~leldn~~~~~edfk~KyE~E~~~r~~~E~di~~lrK~lD~~~l~r~dLE~~iesL~eEl 99 (119)
T 3ol1_A 26 RRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEI 99 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555555555555544444444332 2222222333333333333444555555555554
No 454
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=86.22 E-value=0.29 Score=53.39 Aligned_cols=27 Identities=22% Similarity=0.300 Sum_probs=22.4
Q ss_pred CCCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 91 GKSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 91 ~~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
...+.+.|.|+||||||+..|.|+..+
T Consensus 29 ~~Ge~~~iiG~nGsGKSTLl~~l~Gl~ 55 (235)
T 3tif_A 29 KEGEFVSIMGPSGSGKSTMLNIIGCLD 55 (235)
T ss_dssp CTTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred cCCCEEEEECCCCCcHHHHHHHHhcCC
Confidence 356799999999999999988876543
No 455
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=86.19 E-value=8.8 Score=38.44 Aligned_cols=67 Identities=7% Similarity=0.029 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 927 EEKIENLSAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRLLYCM 993 (1303)
Q Consensus 927 ~~ki~~L~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl 993 (1303)
...+..|+.++..|+..+.+++..+.+..+.+..+++++..+.-.+...|.+...|+.+...|=++.
T Consensus 67 ~~~I~~L~~El~~l~~ki~dLeeel~eK~K~~e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~LV~RW 133 (152)
T 3a7p_A 67 LNTLAILQKELKSKEQEIRRLKEVIALKNKNTERLNAALISGTIENNVLQQKLSDLKKEHSQLVARW 133 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777777777777777777777776666777777777777777777777777777777766664
No 456
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=86.09 E-value=0.56 Score=56.20 Aligned_cols=107 Identities=21% Similarity=0.289 Sum_probs=56.1
Q ss_pred HHHhcCCCCCCC--CchHHHHHHHHHHHHHHcCCCeEEEEeCCcCCCchhhHHHHHHHHHHHhCCCCcCCCcHHHHHHhh
Q 048174 61 MERYKGVPFGKL--SPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYLGGHTAAEGRSVEQQVLES 138 (1303)
Q Consensus 61 ~~~y~~~~~~~~--~PHifavA~~Ay~~m~~~~~~QsIiisGESGaGKTe~~k~i~~yLa~~~~~~~~~~~~ie~~il~s 138 (1303)
.+.|+-..+.++ ..|+..- ....+.++..+.-.+|+|.|++|+|||+.++.|.+.+..-...-......+.
T Consensus 17 a~r~rP~~l~~ivGq~~~~~~-~~~L~~~i~~~~~~~vLL~GppGtGKTtlAr~ia~~~~~~f~~l~a~~~~~~------ 89 (447)
T 3pvs_A 17 AARMRPENLAQYIGQQHLLAA-GKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVK------ 89 (447)
T ss_dssp HHHTCCCSTTTCCSCHHHHST-TSHHHHHHHHTCCCEEEEECSTTSSHHHHHHHHHHHTTCEEEEEETTTCCHH------
T ss_pred HHHhCCCCHHHhCCcHHHHhc-hHHHHHHHHcCCCcEEEEECCCCCcHHHHHHHHHHHhCCCeEEEEeccCCHH------
Confidence 445555544443 2343311 1445666777777899999999999999999998875211000000011121
Q ss_pred chHHHhhcccccccCCCCCcccceEEEEEcCCCCeeeeEEee
Q 048174 139 NPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKRGRISGAAIRT 180 (1303)
Q Consensus 139 npiLEAFGNAkT~rN~NSSRfGK~i~l~f~~~g~i~Ga~i~~ 180 (1303)
.+-+.|..|++.. .+|+..-|.+|.-+.+.......
T Consensus 90 -~ir~~~~~a~~~~-----~~~~~~iLfIDEI~~l~~~~q~~ 125 (447)
T 3pvs_A 90 -EIREAIERARQNR-----NAGRRTILFVDEVHRFNKSQQDA 125 (447)
T ss_dssp -HHHHHHHHHHHHH-----HTTCCEEEEEETTTCC------C
T ss_pred -HHHHHHHHHHHhh-----hcCCCcEEEEeChhhhCHHHHHH
Confidence 1233333333321 14666778888877776554433
No 457
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=86.00 E-value=0.32 Score=50.68 Aligned_cols=26 Identities=19% Similarity=0.404 Sum_probs=23.1
Q ss_pred CeEEEEeCCcCCCchhhHHHHHHHHH
Q 048174 93 SNSILVSGESGAGKTETTKMIMRYLA 118 (1303)
Q Consensus 93 ~QsIiisGESGaGKTe~~k~i~~yLa 118 (1303)
..-|+|+|.+|||||+.++.+.++|-
T Consensus 12 ~~~I~l~G~~GsGKsT~a~~L~~~l~ 37 (199)
T 2bwj_A 12 CKIIFIIGGPGSGKGTQCEKLVEKYG 37 (199)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhC
Confidence 35899999999999999999998863
No 458
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=85.98 E-value=0.35 Score=50.06 Aligned_cols=25 Identities=36% Similarity=0.539 Sum_probs=22.2
Q ss_pred EEEEeCCcCCCchhhHHHHHHHHHH
Q 048174 95 SILVSGESGAGKTETTKMIMRYLAY 119 (1303)
Q Consensus 95 sIiisGESGaGKTe~~k~i~~yLa~ 119 (1303)
-|+|+|-+|||||+.++.+.+.|..
T Consensus 2 ~I~l~G~~GsGKsT~~~~L~~~l~~ 26 (195)
T 2pbr_A 2 LIAFEGIDGSGKTTQAKKLYEYLKQ 26 (195)
T ss_dssp EEEEECSTTSCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHH
Confidence 4899999999999999999888753
No 459
>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae}
Probab=85.98 E-value=0.52 Score=53.84 Aligned_cols=37 Identities=8% Similarity=0.097 Sum_probs=31.8
Q ss_pred HHHHHHcCCCeEEEEeCCcCCCchhhHHHHHHHHHHH
Q 048174 84 YREMINEGKSNSILVSGESGAGKTETTKMIMRYLAYL 120 (1303)
Q Consensus 84 y~~m~~~~~~QsIiisGESGaGKTe~~k~i~~yLa~~ 120 (1303)
.+..+..+.+-+|+|+|.+|+|||.+++.+++-|...
T Consensus 36 L~~~i~~~~~~~lli~GpPGTGKT~~v~~v~~~L~~~ 72 (318)
T 3te6_A 36 IYDSLMSSQNKLFYITNADDSTKFQLVNDVMDELITS 72 (318)
T ss_dssp HHHHHHTTCCCEEEEECCCSHHHHHHHHHHHHHHHHT
T ss_pred HHHHhcCCCCCeEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 3445667899999999999999999999999999653
No 460
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=85.97 E-value=0.49 Score=50.26 Aligned_cols=30 Identities=27% Similarity=0.239 Sum_probs=26.0
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHHHHHHHh
Q 048174 92 KSNSILVSGESGAGKTETTKMIMRYLAYLG 121 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~yLa~~~ 121 (1303)
....++|.|++|||||+.++.++..++..+
T Consensus 22 ~G~~~~i~G~~GsGKTtl~~~l~~~~~~~~ 51 (235)
T 2w0m_A 22 QGFFIALTGEPGTGKTIFSLHFIAKGLRDG 51 (235)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHCC
Confidence 567999999999999999999998877543
No 461
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana}
Probab=85.90 E-value=0.33 Score=53.52 Aligned_cols=25 Identities=36% Similarity=0.567 Sum_probs=22.7
Q ss_pred CeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 93 SNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 93 ~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
...|+|.|.||||||+.++.+.+.|
T Consensus 48 g~~i~l~G~~GsGKSTl~~~La~~l 72 (250)
T 3nwj_A 48 GRSMYLVGMMGSGKTTVGKIMARSL 72 (250)
T ss_dssp TCCEEEECSTTSCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHhc
Confidence 5689999999999999999998865
No 462
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=85.88 E-value=0.31 Score=54.93 Aligned_cols=26 Identities=27% Similarity=0.390 Sum_probs=20.0
Q ss_pred CeEEEEeCCcCCCchhhHHHHHHHHH
Q 048174 93 SNSILVSGESGAGKTETTKMIMRYLA 118 (1303)
Q Consensus 93 ~QsIiisGESGaGKTe~~k~i~~yLa 118 (1303)
.--|.|+|.||||||+.++.+.+.|-
T Consensus 5 ~~iIgItG~sGSGKSTva~~L~~~lg 30 (290)
T 1a7j_A 5 HPIISVTGSSGAGTSTVKHTFDQIFR 30 (290)
T ss_dssp SCEEEEESCC---CCTHHHHHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHHh
Confidence 44799999999999999999988775
No 463
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Probab=85.84 E-value=6.1 Score=39.75 Aligned_cols=49 Identities=24% Similarity=0.309 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 928 EKIENLSAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETE 976 (1303)
Q Consensus 928 ~ki~~L~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E 976 (1303)
.+.......+.-++..++..+.+++..+.++.+++.++......+..++
T Consensus 73 rKyeE~~RKl~~~E~dLeraeeRae~aE~k~~eLEeeL~~~~~nlKsLE 121 (147)
T 2b9c_A 73 RKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLE 121 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 3344444455555555555555555555555555555554444333333
No 464
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11
Probab=85.82 E-value=0.39 Score=50.58 Aligned_cols=25 Identities=24% Similarity=0.426 Sum_probs=23.1
Q ss_pred eEEEEeCCcCCCchhhHHHHHHHHH
Q 048174 94 NSILVSGESGAGKTETTKMIMRYLA 118 (1303)
Q Consensus 94 QsIiisGESGaGKTe~~k~i~~yLa 118 (1303)
+.|.|.|.+|||||+..+.|+.++.
T Consensus 2 ~~i~i~G~nG~GKTTll~~l~g~~~ 26 (189)
T 2i3b_A 2 RHVFLTGPPGVGKTTLIHKASEVLK 26 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCChHHHHHHHHHhhcc
Confidence 4688999999999999999999987
No 465
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=85.77 E-value=0.23 Score=57.02 Aligned_cols=22 Identities=23% Similarity=0.528 Sum_probs=20.6
Q ss_pred EEEeCCcCCCchhhHHHHHHHH
Q 048174 96 ILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 96 IiisGESGaGKTe~~k~i~~yL 117 (1303)
++|+|++|+|||+.++.+.+.|
T Consensus 39 ~ll~Gp~G~GKTtl~~~la~~l 60 (354)
T 1sxj_E 39 LLLYGPNGTGKKTRCMALLESI 60 (354)
T ss_dssp EEEECSTTSSHHHHHHTHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 9999999999999999998865
No 466
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A*
Probab=85.75 E-value=0.36 Score=50.63 Aligned_cols=23 Identities=22% Similarity=0.439 Sum_probs=21.0
Q ss_pred EEEEeCCcCCCchhhHHHHHHHH
Q 048174 95 SILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 95 sIiisGESGaGKTe~~k~i~~yL 117 (1303)
.|.|+|.+|||||+.++.+...|
T Consensus 4 ~i~i~G~~GsGKst~~~~la~~l 26 (208)
T 3ake_A 4 IVTIDGPSASGKSSVARRVAAAL 26 (208)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHhc
Confidence 79999999999999999988765
No 467
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=85.72 E-value=0.4 Score=49.74 Aligned_cols=26 Identities=35% Similarity=0.538 Sum_probs=23.0
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 92 KSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
+.-.|+|.|.+|||||+.++.+.+.|
T Consensus 8 ~~~~I~l~G~~GsGKsT~~~~La~~l 33 (196)
T 2c95_A 8 KTNIIFVVGGPGSGKGTQCEKIVQKY 33 (196)
T ss_dssp TSCEEEEEECTTSSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHh
Confidence 34589999999999999999998876
No 468
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=85.68 E-value=1.8 Score=42.68 Aligned_cols=128 Identities=15% Similarity=0.140 Sum_probs=0.0
Q ss_pred HHHH-HhhHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhhcchhhhhhccCCCcc
Q 048174 839 ITES-QESQEAVQYIVDETSEVKECDITNKGIEVHVKECDTTDRAIEVYVKECDTKDRATEVHVEDCDDIDRAIEPHPIT 917 (1303)
Q Consensus 839 l~eL-~rLe~ee~~r~eee~~~~E~~kL~~~ve~Le~qlee~e~~~~~le~e~~~~~~~~~~~~ee~~~~k~~l~e~~~~ 917 (1303)
+.+| ..|............+..+...+..+...+...+......+..+..+..
T Consensus 3 ~s~LEd~L~~~r~~l~~~~~~~~~le~l~~~l~~l~~~l~~~~~e~~~L~~~l~-------------------------- 56 (135)
T 2e7s_A 3 LGSLEEQLNKSLKTIASQKAAIENYNQLKEDYNTLKRELSDRDDEVKRLREDIA-------------------------- 56 (135)
T ss_dssp ---CCSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHTHHHHHH--------------------------
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH--------------------------
Q ss_pred CcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 918 GKIPCSNEEEEKIENLSAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRLLYCMSEQF 997 (1303)
Q Consensus 918 ~e~~~~~~~~~ki~~L~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl~~le 997 (1303)
++...-...+.++..++.++++|...+-+ ++.+....-...-...+.++.+|+.++..-+..+..++
T Consensus 57 -------eE~~~R~~aE~~~~~ie~ElE~LTasLFe------EAN~MVa~ar~~~~~~e~r~~~L~~ql~e~e~ll~~lq 123 (135)
T 2e7s_A 57 -------KENELRTKAEEEADKLNKEVEDLTASLFD------EANNLVADARMEKYAIEILNKRLTEQLREKDMLLDTLT 123 (135)
T ss_dssp -------HTTSHHHHHHHTTHHHHHHHHHHHHHHHH------HHHHHHHHTTHHHHHHHHHHHHHHHTTTHHHHCC----
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHhh
Q 048174 998 SQLKMILRS 1006 (1303)
Q Consensus 998 ~El~~~l~q 1006 (1303)
.+++ -|+.
T Consensus 124 ~QL~-~LK~ 131 (135)
T 2e7s_A 124 LQLK-NLKK 131 (135)
T ss_dssp ---------
T ss_pred HHHH-HHHH
No 469
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=85.64 E-value=14 Score=34.30 Aligned_cols=71 Identities=20% Similarity=0.099 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 931 ENLSAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRLLYCMSEQFSQLK 1001 (1303)
Q Consensus 931 ~~L~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl~~le~El~ 1001 (1303)
..+.+++..|+.+=..+...+.+++++...+..++..+......+...-.+.-.+.+.+.-++..+++++.
T Consensus 7 ~~l~~eL~~l~~eE~~L~~eL~~lEke~~~l~~el~~le~E~~~L~~eE~~~w~eyn~~~~ql~e~~dE~~ 77 (96)
T 3q8t_A 7 EQLQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLELDDELK 77 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444444444444444444444444444444444444444444444444444
No 470
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=85.60 E-value=0.49 Score=54.98 Aligned_cols=47 Identities=23% Similarity=0.338 Sum_probs=35.1
Q ss_pred hHHHHHHHHHHHHHHc-----------CCCeEEEEeCCcCCCchhhHHHHHHHHHHHh
Q 048174 75 HVFAIADAAYREMINE-----------GKSNSILVSGESGAGKTETTKMIMRYLAYLG 121 (1303)
Q Consensus 75 HifavA~~Ay~~m~~~-----------~~~QsIiisGESGaGKTe~~k~i~~yLa~~~ 121 (1303)
.+..+-......++.. .....|.|.|++|||||++++.|..++..-+
T Consensus 128 ~~~~~l~~~l~~~l~~~~~~~~l~l~~~~g~vi~lvG~nGsGKTTll~~Lag~l~~~~ 185 (359)
T 2og2_A 128 EIKDALKESVLEMLAKKNSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAHRLKNEG 185 (359)
T ss_dssp HHHHHHHHHHHHHHCCC---CSCCCCSSSSEEEEEECCTTSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCcccCCCcceecCCCeEEEEEcCCCChHHHHHHHHHhhccccC
Confidence 4555555555555532 2467999999999999999999999987543
No 471
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=85.55 E-value=0.4 Score=52.50 Aligned_cols=26 Identities=31% Similarity=0.394 Sum_probs=22.8
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 92 KSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
.+..|+|.|++|+|||+.++.|...+
T Consensus 44 ~~~~vll~G~~GtGKT~la~~la~~~ 69 (257)
T 1lv7_A 44 IPKGVLMVGPPGTGKTLLAKAIAGEA 69 (257)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCeEEEECcCCCCHHHHHHHHHHHc
Confidence 46689999999999999999988765
No 472
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=85.47 E-value=0.31 Score=52.40 Aligned_cols=26 Identities=19% Similarity=0.339 Sum_probs=22.4
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 92 KSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
+..-|+|.|-+|||||+.++.+.+.|
T Consensus 6 ~~~~I~l~G~~GsGKsT~a~~La~~l 31 (227)
T 1zd8_A 6 RLLRAVIMGAPGSGKGTVSSRITTHF 31 (227)
T ss_dssp -CCEEEEEECTTSSHHHHHHHHHHHS
T ss_pred cCcEEEEECCCCCCHHHHHHHHHHHc
Confidence 44689999999999999999998765
No 473
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=85.47 E-value=0.35 Score=53.06 Aligned_cols=27 Identities=33% Similarity=0.546 Sum_probs=22.5
Q ss_pred CCCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 91 GKSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 91 ~~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
.....|+|+|.||||||+.++.+.+.+
T Consensus 30 ~~~~~i~l~G~~GsGKSTla~~L~~~l 56 (253)
T 2p5t_B 30 KQPIAILLGGQSGAGKTTIHRIKQKEF 56 (253)
T ss_dssp SSCEEEEEESCGGGTTHHHHHHHHHHT
T ss_pred cCCeEEEEECCCCCCHHHHHHHHHHhc
Confidence 346789999999999999988876654
No 474
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=85.45 E-value=0.4 Score=50.08 Aligned_cols=26 Identities=19% Similarity=0.413 Sum_probs=22.3
Q ss_pred CCCeEEEEeCCcCCCchhhHHHHHHH
Q 048174 91 GKSNSILVSGESGAGKTETTKMIMRY 116 (1303)
Q Consensus 91 ~~~QsIiisGESGaGKTe~~k~i~~y 116 (1303)
.+...|.|+|.+|||||+.++.+.+.
T Consensus 6 ~~~~~I~i~G~~GsGKST~~~~La~~ 31 (203)
T 1uf9_A 6 KHPIIIGITGNIGSGKSTVAALLRSW 31 (203)
T ss_dssp CCCEEEEEEECTTSCHHHHHHHHHHT
T ss_pred cCceEEEEECCCCCCHHHHHHHHHHC
Confidence 34678999999999999999988764
No 475
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=85.42 E-value=0.46 Score=49.86 Aligned_cols=26 Identities=19% Similarity=0.441 Sum_probs=22.8
Q ss_pred CeEEEEeCCcCCCchhhHHHHHHHHH
Q 048174 93 SNSILVSGESGAGKTETTKMIMRYLA 118 (1303)
Q Consensus 93 ~QsIiisGESGaGKTe~~k~i~~yLa 118 (1303)
..-|+|.|-+|||||+.++.+.+.|-
T Consensus 4 ~~~I~i~G~~GsGKsT~~~~L~~~l~ 29 (213)
T 2plr_A 4 GVLIAFEGIDGSGKSSQATLLKDWIE 29 (213)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CeEEEEEcCCCCCHHHHHHHHHHHHh
Confidence 45799999999999999999888763
No 476
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=85.41 E-value=1.3 Score=50.95 Aligned_cols=55 Identities=20% Similarity=0.369 Sum_probs=35.3
Q ss_pred HHHhcCCCCCCCCc--hHHHHHHHHHHHHHHcCCCeEEEEeCCcCCCchhhHHHHHHHHH
Q 048174 61 MERYKGVPFGKLSP--HVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLA 118 (1303)
Q Consensus 61 ~~~y~~~~~~~~~P--HifavA~~Ay~~m~~~~~~QsIiisGESGaGKTe~~k~i~~yLa 118 (1303)
...|+-..+.++-- ++...-..+ +...+.+.+++|+|++|+|||+.++.+.+.+.
T Consensus 7 ~~k~rp~~~~~~vg~~~~~~~L~~~---l~~~~~~~~~ll~G~~G~GKT~la~~la~~l~ 63 (373)
T 1jr3_A 7 ARKWRPQTFADVVGQEHVLTALANG---LSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 (373)
T ss_dssp HHHTCCCSTTTSCSCHHHHHHHHHH---HHHTCCCSEEEEESCTTSSHHHHHHHHHHHHS
T ss_pred HHhhCCCchhhccCcHHHHHHHHHH---HHhCCCCeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 34565555444432 333322222 22344567899999999999999999988874
No 477
>2ehv_A Hypothetical protein PH0186; KAIC, RECA ATPase, unknown function; HET: ADP; 2.07A {Pyrococcus horikoshii} PDB: 2zts_A*
Probab=85.30 E-value=0.46 Score=51.29 Aligned_cols=27 Identities=26% Similarity=0.437 Sum_probs=23.7
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHHHHH
Q 048174 92 KSNSILVSGESGAGKTETTKMIMRYLA 118 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~yLa 118 (1303)
..+.+.|.|++|||||+.++.|+....
T Consensus 29 ~G~~~~l~GpnGsGKSTLl~~i~~~~~ 55 (251)
T 2ehv_A 29 EGTTVLLTGGTGTGKTTFAAQFIYKGA 55 (251)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 578999999999999999999986544
No 478
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A*
Probab=85.29 E-value=0.37 Score=51.33 Aligned_cols=26 Identities=27% Similarity=0.328 Sum_probs=23.1
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 92 KSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
..+.+.|.|+||||||+.++.|+..+
T Consensus 24 ~G~~~~l~G~nGsGKSTll~~l~g~~ 49 (231)
T 4a74_A 24 TQAITEVFGEFGSGKTQLAHTLAVMV 49 (231)
T ss_dssp SSEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHH
Confidence 67899999999999999999888654
No 479
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A
Probab=85.25 E-value=0.52 Score=56.87 Aligned_cols=48 Identities=23% Similarity=0.376 Sum_probs=37.1
Q ss_pred hHHHHHHHHHHHHHHc---------CCCeEEEEeCCcCCCchhhHHHHHHHHHHHhC
Q 048174 75 HVFAIADAAYREMINE---------GKSNSILVSGESGAGKTETTKMIMRYLAYLGG 122 (1303)
Q Consensus 75 HifavA~~Ay~~m~~~---------~~~QsIiisGESGaGKTe~~k~i~~yLa~~~~ 122 (1303)
.++.+-......++.. ...+.|.|.|.||||||++++.|..++..-++
T Consensus 266 ~~~~~l~~~l~~~l~~~~~~Isl~i~~GeVI~LVGpNGSGKTTLl~~LAgll~~~~G 322 (503)
T 2yhs_A 266 ALYGLLKEEMGEILAKVDEPLNVEGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGK 322 (503)
T ss_dssp GHHHHHHHHHHHHHHTTBCCCCCCSCTTEEEEEECCTTSSHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhCCCCCCceeeccCCeEEEEECCCcccHHHHHHHHHHHhhhcCC
Confidence 4666666666666542 35789999999999999999999999875443
No 480
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=85.23 E-value=0.33 Score=49.82 Aligned_cols=25 Identities=36% Similarity=0.490 Sum_probs=17.5
Q ss_pred CeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 93 SNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 93 ~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
...|+|+|.+|||||+.++.+-+.|
T Consensus 5 ~~~I~l~G~~GsGKST~a~~La~~l 29 (183)
T 2vli_A 5 SPIIWINGPFGVGKTHTAHTLHERL 29 (183)
T ss_dssp CCEEEEECCC----CHHHHHHHHHS
T ss_pred CeEEEEECCCCCCHHHHHHHHHHhc
Confidence 4579999999999999999886654
No 481
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=85.18 E-value=0.47 Score=57.63 Aligned_cols=47 Identities=11% Similarity=0.091 Sum_probs=37.2
Q ss_pred CCCchHHHHHHHHHHHHHHcCCCeEEEEeCCcCCCchhhHHHHHHHHHH
Q 048174 71 KLSPHVFAIADAAYREMINEGKSNSILVSGESGAGKTETTKMIMRYLAY 119 (1303)
Q Consensus 71 ~~~PHifavA~~Ay~~m~~~~~~QsIiisGESGaGKTe~~k~i~~yLa~ 119 (1303)
-.+|+|..+..++|..- .++...|+|+|-||||||+.++.+-+.|-.
T Consensus 375 f~rpeV~~vLr~~~~~~--~~~~~~I~l~GlsGsGKSTIa~~La~~L~~ 421 (511)
T 1g8f_A 375 FSYPEVVKILRESNPPR--PKQGFSIVLGNSLTVSREQLSIALLSTFLQ 421 (511)
T ss_dssp TSCHHHHHHHHHHSCCG--GGCCEEEEECTTCCSCHHHHHHHHHHHHTT
T ss_pred ccChhhHHHHHHhcccc--cccceEEEecccCCCCHHHHHHHHHHHHHH
Confidence 35678888877777321 244579999999999999999999999875
No 482
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=85.14 E-value=0.47 Score=49.00 Aligned_cols=25 Identities=28% Similarity=0.373 Sum_probs=22.2
Q ss_pred CeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 93 SNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 93 ~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
+--|+|.|.+|||||+.++.+.+.+
T Consensus 3 ~~~I~l~G~~GsGKsT~a~~L~~~~ 27 (196)
T 1tev_A 3 PLVVFVLGGPGAGKGTQCARIVEKY 27 (196)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHh
Confidence 4579999999999999999988765
No 483
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=85.06 E-value=0.43 Score=50.22 Aligned_cols=27 Identities=26% Similarity=0.524 Sum_probs=24.2
Q ss_pred CeEEEEeCCcCCCchhhHHHHHHHHHH
Q 048174 93 SNSILVSGESGAGKTETTKMIMRYLAY 119 (1303)
Q Consensus 93 ~QsIiisGESGaGKTe~~k~i~~yLa~ 119 (1303)
..-|+|+|-+|||||+.++.+.++|-.
T Consensus 10 ~~~I~l~G~~GsGKST~~~~L~~~l~~ 36 (212)
T 2wwf_A 10 GKFIVFEGLDRSGKSTQSKLLVEYLKN 36 (212)
T ss_dssp SCEEEEEESTTSSHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 458999999999999999999988754
No 484
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=85.05 E-value=0.38 Score=37.65 Aligned_cols=30 Identities=17% Similarity=0.222 Sum_probs=22.1
Q ss_pred ccccccceecC--CCc-----------cCCccCCCCCCCCcCCCCCccccCcc
Q 048174 1082 MEWVKEKWECE--KCS-----------CSEAQHGQSSCGLIVWPPKNYNCSFC 1121 (1303)
Q Consensus 1082 ~~~~~~~~~c~--~c~-----------~~~~~~~~~~~~~~~~~~~~~~c~~c 1121 (1303)
.+..+.+|+|. .|+ |...+.++ |||+|.+|
T Consensus 6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~----------k~~~C~~C 48 (48)
T 2ent_A 6 SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGV----------KPSGPSSG 48 (48)
T ss_dssp SSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCC----------CSCSSCCC
T ss_pred CcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCC----------CCCCCCCC
Confidence 35678899998 896 34444443 89999998
No 485
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=85.01 E-value=6.5 Score=36.43 Aligned_cols=25 Identities=24% Similarity=0.153 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 926 EEEKIENLSAEVEKLKALLQAEKQR 950 (1303)
Q Consensus 926 ~~~ki~~L~~E~~kLe~~leel~~~ 950 (1303)
..++|..|+.+|..|+.+++.+..+
T Consensus 21 yIdKVR~LEqqN~~Le~~i~~l~~~ 45 (93)
T 3s4r_A 21 LIDKVRFLEQQNKILLAELEQLKGQ 45 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 5678888999999998888777654
No 486
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=84.98 E-value=8.2 Score=34.54 Aligned_cols=44 Identities=16% Similarity=0.286 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 927 EEKIENLSAEVEKLKALLQAEKQRADDSARKCAEARVLSEKRLK 970 (1303)
Q Consensus 927 ~~ki~~L~~E~~kLe~~leel~~~~~ele~~~~e~~~~~~~l~~ 970 (1303)
..+++.++.++..|+..+..++..+++...+-..++.++..+.+
T Consensus 12 ~~klq~~E~rN~~Le~~v~~le~~Le~s~~~q~~~~~Elk~l~e 55 (79)
T 3cvf_A 12 QQKVQDLETRNAELEHQLRAMERSLEEARAERERARAEVGRAAQ 55 (79)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677777777777777777777777665555455444444444
No 487
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=84.97 E-value=0.48 Score=51.60 Aligned_cols=27 Identities=26% Similarity=0.309 Sum_probs=23.8
Q ss_pred CCCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 91 GKSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 91 ~~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
..+..|+|.|++|+|||..++.+.+.+
T Consensus 37 ~~~~~vll~G~~GtGKT~la~~la~~~ 63 (262)
T 2qz4_A 37 KVPKGALLLGPPGCGKTLLAKAVATEA 63 (262)
T ss_dssp CCCCEEEEESCTTSSHHHHHHHHHHHH
T ss_pred CCCceEEEECCCCCCHHHHHHHHHHHh
Confidence 456789999999999999999988765
No 488
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=84.90 E-value=0.38 Score=51.44 Aligned_cols=25 Identities=20% Similarity=0.389 Sum_probs=22.4
Q ss_pred eEEEEeCCcCCCchhhHHHHHHHHH
Q 048174 94 NSILVSGESGAGKTETTKMIMRYLA 118 (1303)
Q Consensus 94 QsIiisGESGaGKTe~~k~i~~yLa 118 (1303)
.-|+|.|.+|||||+.++.+.+.|-
T Consensus 6 ~~I~l~G~~GsGKsT~~~~La~~l~ 30 (222)
T 1zak_A 6 LKVMISGAPASGKGTQCELIKTKYQ 30 (222)
T ss_dssp CCEEEEESTTSSHHHHHHHHHHHHC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4699999999999999999988763
No 489
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=84.90 E-value=0.44 Score=52.58 Aligned_cols=28 Identities=25% Similarity=0.364 Sum_probs=24.6
Q ss_pred CeEEEEeCCcCCCchhhHHHHHHHHHHH
Q 048174 93 SNSILVSGESGAGKTETTKMIMRYLAYL 120 (1303)
Q Consensus 93 ~QsIiisGESGaGKTe~~k~i~~yLa~~ 120 (1303)
..-|+|+|-+|||||+.++.+.++|...
T Consensus 4 ~~lIvl~G~pGSGKSTla~~La~~L~~~ 31 (260)
T 3a4m_A 4 IMLIILTGLPGVGKSTFSKNLAKILSKN 31 (260)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHT
T ss_pred CEEEEEEcCCCCCHHHHHHHHHHHHHhC
Confidence 3579999999999999999999988654
No 490
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=84.89 E-value=0.34 Score=51.48 Aligned_cols=23 Identities=26% Similarity=0.436 Sum_probs=20.4
Q ss_pred EEEEeCCcCCCchhhHHHHHHHH
Q 048174 95 SILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 95 sIiisGESGaGKTe~~k~i~~yL 117 (1303)
-|+|+|.+|||||+.++.+.+.+
T Consensus 2 ~I~l~G~~GsGKsT~a~~L~~~~ 24 (216)
T 3dl0_A 2 NLVLMGLPGAGKGTQGERIVEKY 24 (216)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 38999999999999999987754
No 491
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=84.87 E-value=0.51 Score=49.51 Aligned_cols=28 Identities=29% Similarity=0.445 Sum_probs=24.3
Q ss_pred cCCCeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 90 EGKSNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 90 ~~~~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
...+..|+|+|.+|||||+.++.+.++|
T Consensus 17 ~~~~~~I~l~G~~GsGKST~a~~La~~l 44 (201)
T 2cdn_A 17 RGSHMRVLLLGPPGAGKGTQAVKLAEKL 44 (201)
T ss_dssp CCSCCEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHh
Confidence 3455689999999999999999998876
No 492
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=84.76 E-value=3.4 Score=37.03 Aligned_cols=58 Identities=16% Similarity=0.147 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 048174 944 LQAEKQRADDSARKCAEARVLSEKRLKKLEETERRVYQLQDSLNRLLYCMSEQFSQLK 1001 (1303)
Q Consensus 944 leel~~~~~ele~~~~e~~~~~~~l~~kl~e~E~~~~~Lq~el~~Le~kl~~le~El~ 1001 (1303)
.+++..++.+++.++.++++.++.+...+++......+++.++..+-+.+.---.||+
T Consensus 8 ~e~~~~klq~~E~rN~~Le~~v~~le~~Le~s~~~q~~~~~Elk~l~e~Ld~KI~eL~ 65 (79)
T 3cvf_A 8 REETQQKVQDLETRNAELEHQLRAMERSLEEARAERERARAEVGRAAQLLDVSLFELS 65 (79)
T ss_dssp --CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 3344444444455555555555556666666666666777777777666655445554
No 493
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=84.72 E-value=0.48 Score=49.96 Aligned_cols=28 Identities=21% Similarity=0.406 Sum_probs=24.7
Q ss_pred CCeEEEEeCCcCCCchhhHHHHHHHHHH
Q 048174 92 KSNSILVSGESGAGKTETTKMIMRYLAY 119 (1303)
Q Consensus 92 ~~QsIiisGESGaGKTe~~k~i~~yLa~ 119 (1303)
++--|+|+|-+|||||+.++.+.+.|-.
T Consensus 8 ~~~~I~l~G~~GsGKsT~~~~L~~~l~~ 35 (215)
T 1nn5_A 8 RGALIVLEGVDRAGKSTQSRKLVEALCA 35 (215)
T ss_dssp CCCEEEEEESTTSSHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 4568999999999999999999988754
No 494
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A*
Probab=84.65 E-value=0.71 Score=55.11 Aligned_cols=40 Identities=25% Similarity=0.267 Sum_probs=30.7
Q ss_pred HHHHHHHHHcCC-CeEEEEeCCcCCCchhhHHHHHHHHHHH
Q 048174 81 DAAYREMINEGK-SNSILVSGESGAGKTETTKMIMRYLAYL 120 (1303)
Q Consensus 81 ~~Ay~~m~~~~~-~QsIiisGESGaGKTe~~k~i~~yLa~~ 120 (1303)
..+...+..... ...++|.|++|+|||+.++.|.+++...
T Consensus 117 ~~~~~~~a~~~~~~~~lll~Gp~G~GKTtLa~aia~~l~~~ 157 (440)
T 2z4s_A 117 YHAALEVAKHPGRYNPLFIYGGVGLGKTHLLQSIGNYVVQN 157 (440)
T ss_dssp HHHHHHHHHSTTSSCCEEEECSSSSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 344445554433 7899999999999999999999988654
No 495
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=84.59 E-value=0.59 Score=53.07 Aligned_cols=46 Identities=22% Similarity=0.291 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHc--------CCCeEEEEeCCcCCCchhhHHHHHHHHHHHh
Q 048174 76 VFAIADAAYREMINE--------GKSNSILVSGESGAGKTETTKMIMRYLAYLG 121 (1303)
Q Consensus 76 ifavA~~Ay~~m~~~--------~~~QsIiisGESGaGKTe~~k~i~~yLa~~~ 121 (1303)
+..+-.+....++.. .....|+|.|.+|||||++++.+..+++..+
T Consensus 79 ~~~~~~~~l~~~l~~~~~~~~~~~~~~vi~ivG~~GsGKTTl~~~LA~~l~~~g 132 (306)
T 1vma_A 79 ALESLKEIILEILNFDTKLNVPPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEG 132 (306)
T ss_dssp HHHHHHHHHHHHTCSCCCCCCCSSSCEEEEEECCTTSSHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCCCCcccCCCCeEEEEEcCCCChHHHHHHHHHHHHHhcC
Confidence 555555555555432 3467899999999999999999999997643
No 496
>1nij_A Hypothetical protein YJIA; structural genomics, P-loop protein, GTP binding, structure function project, S2F, unknown function; 2.00A {Escherichia coli} SCOP: c.37.1.10 d.237.1.1
Probab=84.54 E-value=0.42 Score=54.50 Aligned_cols=23 Identities=35% Similarity=0.442 Sum_probs=20.4
Q ss_pred eEEEEeCCcCCCchhhHHHHHHH
Q 048174 94 NSILVSGESGAGKTETTKMIMRY 116 (1303)
Q Consensus 94 QsIiisGESGaGKTe~~k~i~~y 116 (1303)
..++|+|.||||||+..++++..
T Consensus 5 ~v~~i~G~~GaGKTTll~~l~~~ 27 (318)
T 1nij_A 5 AVTLLTGFLGAGKTTLLRHILNE 27 (318)
T ss_dssp EEEEEEESSSSSCHHHHHHHHHS
T ss_pred cEEEEEecCCCCHHHHHHHHHhh
Confidence 57899999999999998888765
No 497
>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1
Probab=84.33 E-value=0.41 Score=58.34 Aligned_cols=25 Identities=40% Similarity=0.599 Sum_probs=22.0
Q ss_pred CeEEEEeCCcCCCchhhHHHHHHHH
Q 048174 93 SNSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 93 ~QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
.+.|+|+|++|||||++.+.++.++
T Consensus 260 g~~i~I~GptGSGKTTlL~aL~~~i 284 (511)
T 2oap_1 260 KFSAIVVGETASGKTTTLNAIMMFI 284 (511)
T ss_dssp TCCEEEEESTTSSHHHHHHHHGGGS
T ss_pred CCEEEEECCCCCCHHHHHHHHHhhC
Confidence 3469999999999999999988776
No 498
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D*
Probab=84.22 E-value=0.85 Score=52.46 Aligned_cols=45 Identities=18% Similarity=0.245 Sum_probs=0.0
Q ss_pred CchHHHHHHHHHHHHHHcCCC-eEEEEeCCcCCCchhhHHHHHHHH
Q 048174 73 SPHVFAIADAAYREMINEGKS-NSILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 73 ~PHifavA~~Ay~~m~~~~~~-QsIiisGESGaGKTe~~k~i~~yL 117 (1303)
..++..........+.....+ ..|+|+|++|+|||..++.+.+.+
T Consensus 49 ~~~~~~~l~~l~~~~~~~~~~~~~vLl~GppGtGKT~la~~la~~l 94 (368)
T 3uk6_A 49 QLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQAL 94 (368)
T ss_dssp CHHHHHHHHHHHHHHHTTCCTTCEEEEEESTTSSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCCHHHHHHHHHHHh
No 499
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=84.18 E-value=0.45 Score=52.33 Aligned_cols=22 Identities=27% Similarity=0.341 Sum_probs=0.0
Q ss_pred EEEeCCcCCCchhhHHHHHHHH
Q 048174 96 ILVSGESGAGKTETTKMIMRYL 117 (1303)
Q Consensus 96 IiisGESGaGKTe~~k~i~~yL 117 (1303)
|+|+|.+|||||+.++.+.+.+
T Consensus 4 i~I~G~~GSGKSTla~~La~~~ 25 (253)
T 2ze6_A 4 HLIYGPTCSGKTDMAIQIAQET 25 (253)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHhcC
No 500
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=84.08 E-value=0.55 Score=48.70 Aligned_cols=26 Identities=38% Similarity=0.575 Sum_probs=0.0
Q ss_pred CCCeEEEEeCCcCCCchhhHHHHHHH
Q 048174 91 GKSNSILVSGESGAGKTETTKMIMRY 116 (1303)
Q Consensus 91 ~~~QsIiisGESGaGKTe~~k~i~~y 116 (1303)
.+...|+|+|-+|||||+.++.+-+.
T Consensus 8 ~~~~~I~l~G~~GsGKSTv~~~La~~ 33 (184)
T 1y63_A 8 PKGINILITGTPGTGKTSMAEMIAAE 33 (184)
T ss_dssp CSSCEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHh
Done!