Your job contains 1 sequence.
>048175
ENKINHWMLNLLMGFLSPQIDLEYSDGPTLPTHGSDEFRPFVRCLLESFCIGFLMTFFSA
FDVHVFWPILLFYWLTLFTLTMRRQIMHMIKYRYVPFSFVKQRYDGKMPSSSDAMSTDDW
GGACYIHIVLFFFG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048175
(134 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2136373 - symbol:ATRER1A "AT4G39220" species:3... 320 9.1e-29 1
TAIR|locus:2049354 - symbol:RER1B "AT2G21600" species:370... 311 8.2e-28 1
TAIR|locus:2058583 - symbol:ATRER1C1 "AT2G23310" species:... 278 2.6e-24 1
MGI|MGI:1915080 - symbol:Rer1 "RER1 retention in endoplas... 238 4.4e-20 1
RGD|1306324 - symbol:Rer1 "RER1 retention in endoplasmic ... 238 4.4e-20 1
UNIPROTKB|O15258 - symbol:RER1 "Protein RER1" species:960... 236 7.2e-20 1
UNIPROTKB|Q5ZHM5 - symbol:RER1 "Protein RER1" species:903... 235 9.2e-20 1
UNIPROTKB|I3LJC8 - symbol:LOC100736849 "Uncharacterized p... 232 1.9e-19 1
UNIPROTKB|A5PJ65 - symbol:RER1 "Protein RER1" species:991... 231 2.5e-19 1
UNIPROTKB|F6XF58 - symbol:RER1 "Uncharacterized protein" ... 229 4.0e-19 1
WB|WBGene00009783 - symbol:rer-1 species:6239 "Caenorhabd... 226 8.3e-19 1
ZFIN|ZDB-GENE-040426-1494 - symbol:rer1 "RER1 retention i... 223 1.7e-18 1
TAIR|locus:2062185 - symbol:AT2G18240 "AT2G18240" species... 218 5.8e-18 1
ASPGD|ASPL0000006680 - symbol:AN5915 species:162425 "Emer... 216 9.5e-18 1
CGD|CAL0003736 - symbol:orf19.7202 species:5476 "Candida ... 171 2.5e-16 2
UNIPROTKB|Q5A093 - symbol:RER1 "Putative uncharacterized ... 171 2.5e-16 2
FB|FBgn0039303 - symbol:CG11857 species:7227 "Drosophila ... 194 2.0e-15 1
UNIPROTKB|G4N8F0 - symbol:MGG_06273 "Uncharacterized prot... 193 2.6e-15 1
SGD|S000000507 - symbol:RER1 "Protein involved in retenti... 177 1.3e-13 1
POMBASE|SPAC22E12.05c - symbol:rer1 "Rer1 family protein ... 166 1.9e-12 1
DICTYBASE|DDB_G0292588 - symbol:rer1 "retention in endopl... 163 3.9e-12 1
UNIPROTKB|Q5T092 - symbol:RER1 "Protein RER1" species:960... 147 2.0e-10 1
UNIPROTKB|E2R2Q8 - symbol:RER1 "Uncharacterized protein" ... 145 3.2e-10 1
UNIPROTKB|Q5T091 - symbol:RER1 "Protein RER1" species:960... 108 3.2e-06 1
>TAIR|locus:2136373 [details] [associations]
symbol:ATRER1A "AT4G39220" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=RCA] [GO:0006944
"cellular membrane fusion" evidence=RCA] [GO:0005794 "Golgi
apparatus" evidence=IDA] InterPro:IPR004932 Pfam:PF03248
PIRSF:PIRSF016013 GO:GO:0016021 GO:GO:0005794 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161594 GO:GO:0006890 EMBL:AL050351
EMBL:AB010945 EMBL:AY044321 EMBL:BT000929 EMBL:AY086110
IPI:IPI00518107 PIR:T08570 RefSeq:NP_195633.1 UniGene:At.472
TCDB:9.B.82.1.3 PaxDb:O48670 PRIDE:O48670 EnsemblPlants:AT4G39220.1
GeneID:830077 KEGG:ath:AT4G39220 TAIR:At4g39220 eggNOG:COG5249
HOGENOM:HOG000163668 InParanoid:O48670 OMA:FFDVPVF PhylomeDB:O48670
ProtClustDB:CLSN2683605 Genevestigator:O48670 GermOnline:AT4G39220
PANTHER:PTHR10743 Uniprot:O48670
Length = 191
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 68/120 (56%), Positives = 80/120 (66%)
Query: 7 WMLNLLMGFLSPQIDLE---YSDGPTLPTHGSDEFRPFVRCLLE---------SFCIGFL 54
++LNLL+GFLSP +D E SDGP+LPT GSDEF+PF+R L E +FCI FL
Sbjct: 71 YLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWYSMTKAFCIAFL 130
Query: 55 MTFFSAFDVHVFWPIXXXXXXXXXXXXMRRQIMHMIKYRYVPFSFVKQRYDGKMPSSSDA 114
MTFFS FDV VFWPI MRRQI HMIKY+Y+PFSF KQ+Y G+ S S A
Sbjct: 131 MTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSFGKQKYGGRSSSGSRA 190
>TAIR|locus:2049354 [details] [associations]
symbol:RER1B "AT2G21600" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005801 "cis-Golgi network"
evidence=TAS] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA]
[GO:0006944 "cellular membrane fusion" evidence=RCA]
InterPro:IPR004932 Pfam:PF03248 PIRSF:PIRSF016013 GO:GO:0005783
GO:GO:0016021 GO:GO:0005794 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006890 GO:GO:0005801 EMBL:AC007119 eggNOG:COG5249
HOGENOM:HOG000163668 ProtClustDB:CLSN2683605 PANTHER:PTHR10743
EMBL:AB010946 EMBL:AY057644 EMBL:AY113014 EMBL:AY088719
IPI:IPI00518139 PIR:B84603 PIR:T51628 RefSeq:NP_179754.1
UniGene:At.473 UniGene:At.72685 STRING:O48671 PaxDb:O48671
PRIDE:O48671 EnsemblPlants:AT2G21600.1 GeneID:816698
KEGG:ath:AT2G21600 TAIR:At2g21600 InParanoid:O48671 OMA:GKQKYSG
PhylomeDB:O48671 Genevestigator:O48671 GermOnline:AT2G21600
Uniprot:O48671
Length = 195
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 65/117 (55%), Positives = 79/117 (67%)
Query: 7 WMLNLLMGFLSPQID--LEYSDGPTLPTHGSDEFRPFVRCLLE---------SFCIGFLM 55
++LNLL+GFLSP +D LE SDG TLPT GSDEF+PF+R L E +FCI FLM
Sbjct: 71 YLLNLLIGFLSPLVDPELEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSMTKAFCIAFLM 130
Query: 56 TFFSAFDVHVFWPIXXXXXXXXXXXXMRRQIMHMIKYRYVPFSFVKQRYDGKMPSSS 112
TFFS FDV VFWPI MRRQI HMIK++Y+PFS KQ+Y G+ S++
Sbjct: 131 TFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGKQKYSGRKSSAN 187
>TAIR|locus:2058583 [details] [associations]
symbol:ATRER1C1 "AT2G23310" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016021 "integral to membrane"
evidence=IEA;ISS] [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=NAS] [GO:0045185 "maintenance of
protein location" evidence=IGI] InterPro:IPR004932 Pfam:PF03248
PIRSF:PIRSF016013 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC002391 GO:GO:0006890 GO:GO:0045185
eggNOG:COG5249 HOGENOM:HOG000163668 ProtClustDB:CLSN2683605
PANTHER:PTHR10743 EMBL:AB018552 EMBL:AY069898 EMBL:AY097390
EMBL:AY086455 IPI:IPI00548979 PIR:T00501 PIR:T51629
RefSeq:NP_565550.1 UniGene:At.25538 IntAct:Q9ZWI7 PaxDb:Q9ZWI7
PRIDE:Q9ZWI7 EnsemblPlants:AT2G23310.1 GeneID:816863
KEGG:ath:AT2G23310 TAIR:At2g23310 InParanoid:Q9ZWI7 OMA:TRRSDEY
PhylomeDB:Q9ZWI7 Genevestigator:Q9ZWI7 Uniprot:Q9ZWI7
Length = 212
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 63/122 (51%), Positives = 78/122 (63%)
Query: 4 INHWMLNLLMGFLSPQIDLEYS--DGPTLPTHGSDEFRPFVRCLLE---------SFCIG 52
I ++LNL++ FLSPQ D E S G +LPT SDE+RPFVR L E +F IG
Sbjct: 90 IGIYLLNLIIAFLSPQEDPEASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFIIG 149
Query: 53 FLMTFFSAFDVHVFWPIXXXXXXXXXXXXMRRQIMHMIKYRYVPFSFVKQRYDGKMPSSS 112
F+MTFF FDV VFWPI MR+QI HMIKYRYVPFSF K++Y GK P+ +
Sbjct: 150 FMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKKQY-GKKPAPT 208
Query: 113 DA 114
++
Sbjct: 209 ES 210
>MGI|MGI:1915080 [details] [associations]
symbol:Rer1 "RER1 retention in endoplasmic reticulum 1
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030173
"integral to Golgi membrane" evidence=ISO] InterPro:IPR004932
Pfam:PF03248 PIRSF:PIRSF016013 MGI:MGI:1915080 GO:GO:0030173
GO:GO:0006890 eggNOG:COG5249 HOGENOM:HOG000163668 OMA:FFDVPVF
PANTHER:PTHR10743 CTD:11079 GeneTree:ENSGT00510000047137
HOVERGEN:HBG002871 OrthoDB:EOG4Z36FQ ChiTaRS:RER1 EMBL:AK002550
EMBL:AK003682 EMBL:AK013262 EMBL:AK078396 EMBL:AK168192
EMBL:BC029189 IPI:IPI00133119 RefSeq:NP_080671.1 UniGene:Mm.241604
DIP:DIP-59593N STRING:Q9CQU3 PhosphoSite:Q9CQU3 PaxDb:Q9CQU3
PRIDE:Q9CQU3 Ensembl:ENSMUST00000030914 GeneID:67830 KEGG:mmu:67830
InParanoid:Q9CQU3 NextBio:325649 Bgee:Q9CQU3 Genevestigator:Q9CQU3
GermOnline:ENSMUSG00000029048 Uniprot:Q9CQU3
Length = 196
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 53/112 (47%), Positives = 68/112 (60%)
Query: 9 LNLLMGFLSPQID---LEYSD-GPTLPTHGSDEFRPFVRCLLE---------SFCIGFLM 55
LNL + FLSP++D +E SD GP+LPT ++EFRPF+R L E + +
Sbjct: 76 LNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMIC 135
Query: 56 TFFSAFDVHVFWPIXXXXXXXXXXXXMRRQIMHMIKYRYVPFSFVKQRYDGK 107
TFF AF+V VFWPI M+RQI HMIKYRY+PF+ K+RY GK
Sbjct: 136 TFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRRYKGK 187
>RGD|1306324 [details] [associations]
symbol:Rer1 "RER1 retention in endoplasmic reticulum 1 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA;ISO] [GO:0030173 "integral to Golgi membrane"
evidence=IEA;ISO] InterPro:IPR004932 Pfam:PF03248 PIRSF:PIRSF016013
RGD:1306324 GO:GO:0030173 GO:GO:0006890 eggNOG:COG5249
HOGENOM:HOG000163668 OMA:FFDVPVF PANTHER:PTHR10743 CTD:11079
GeneTree:ENSGT00510000047137 HOVERGEN:HBG002871 OrthoDB:EOG4Z36FQ
EMBL:BC100270 IPI:IPI00202231 RefSeq:NP_001034101.1
UniGene:Rn.129142 STRING:Q498C8 PhosphoSite:Q498C8 PRIDE:Q498C8
Ensembl:ENSRNOT00000019620 GeneID:298675 KEGG:rno:298675
InParanoid:Q498C8 NextBio:644150 Genevestigator:Q498C8
GermOnline:ENSRNOG00000014270 Uniprot:Q498C8
Length = 196
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 53/112 (47%), Positives = 68/112 (60%)
Query: 9 LNLLMGFLSPQID---LEYSD-GPTLPTHGSDEFRPFVRCLLE---------SFCIGFLM 55
LNL + FLSP++D +E SD GP+LPT ++EFRPF+R L E + +
Sbjct: 76 LNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMIC 135
Query: 56 TFFSAFDVHVFWPIXXXXXXXXXXXXMRRQIMHMIKYRYVPFSFVKQRYDGK 107
TFF AF+V VFWPI M+RQI HMIKYRY+PF+ K+RY GK
Sbjct: 136 TFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRRYKGK 187
>UNIPROTKB|O15258 [details] [associations]
symbol:RER1 "Protein RER1" species:9606 "Homo sapiens"
[GO:0030173 "integral to Golgi membrane" evidence=IDA] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR004932
Pfam:PF03248 PIRSF:PIRSF016013 GO:GO:0030173 GO:GO:0006890
eggNOG:COG5249 PANTHER:PTHR10743 CTD:11079 HOVERGEN:HBG002871
EMBL:AJ001421 EMBL:AF091071 EMBL:BC004965 IPI:IPI01015125
RefSeq:NP_008964.3 UniGene:Hs.741204 ProteinModelPortal:O15258
IntAct:O15258 STRING:O15258 TCDB:9.B.82.1.2 PhosphoSite:O15258
PaxDb:O15258 PRIDE:O15258 DNASU:11079 Ensembl:ENST00000306256
Ensembl:ENST00000488353 GeneID:11079 KEGG:hsa:11079 UCSC:uc001aje.2
GeneCards:GC01P002313 HGNC:HGNC:30309 HPA:CAB037240
neXtProt:NX_O15258 PharmGKB:PA134901074 InParanoid:O15258
ChiTaRS:RER1 GenomeRNAi:11079 NextBio:42122 ArrayExpress:O15258
Bgee:O15258 CleanEx:HS_RER1 Genevestigator:O15258
GermOnline:ENSG00000157916 Uniprot:O15258
Length = 196
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 53/112 (47%), Positives = 68/112 (60%)
Query: 9 LNLLMGFLSPQID---LEYSD-GPTLPTHGSDEFRPFVRCLLE---------SFCIGFLM 55
LNL + FLSP++D +E SD GP+LPT ++EFRPF+R L E + +
Sbjct: 76 LNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVC 135
Query: 56 TFFSAFDVHVFWPIXXXXXXXXXXXXMRRQIMHMIKYRYVPFSFVKQRYDGK 107
TFF AF+V VFWPI M+RQI HMIKYRY+PF+ K+RY GK
Sbjct: 136 TFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRRYRGK 187
>UNIPROTKB|Q5ZHM5 [details] [associations]
symbol:RER1 "Protein RER1" species:9031 "Gallus gallus"
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] [GO:0030173 "integral to Golgi membrane"
evidence=IEA] InterPro:IPR004932 Pfam:PF03248 PIRSF:PIRSF016013
GO:GO:0030173 GO:GO:0006890 eggNOG:COG5249 HOGENOM:HOG000163668
OMA:FFDVPVF PANTHER:PTHR10743 CTD:11079
GeneTree:ENSGT00510000047137 HOVERGEN:HBG002871 OrthoDB:EOG4Z36FQ
EMBL:AJ721109 IPI:IPI00602719 RefSeq:NP_001006300.1
UniGene:Gga.1255 STRING:Q5ZHM5 Ensembl:ENSGALT00000035185
Ensembl:ENSGALT00000040422 GeneID:419397 KEGG:gga:419397
InParanoid:Q5ZHM5 NextBio:20822456 Uniprot:Q5ZHM5
Length = 196
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 55/112 (49%), Positives = 70/112 (62%)
Query: 9 LNLLMGFLSPQID---LEYSD-GPTLPTHGSDEFRPFVRCLLE-----SFCIGFLM---- 55
LNL + FLSP++D +E SD GP+LPT ++EFRPF+R L E S G L+
Sbjct: 76 LNLFIAFLSPKVDPSLMEDSDDGPSLPTRQNEEFRPFIRRLPEFKFWHSATKGILVAMAC 135
Query: 56 TFFSAFDVHVFWPIXXXXXXXXXXXXMRRQIMHMIKYRYVPFSFVKQRYDGK 107
TFF AF+V VFWPI M+RQI HMIKYRY+PF+ K++Y GK
Sbjct: 136 TFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRKYKGK 187
>UNIPROTKB|I3LJC8 [details] [associations]
symbol:LOC100736849 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR004932 Pfam:PF03248 PIRSF:PIRSF016013 GO:GO:0016021
OMA:FFDVPVF PANTHER:PTHR10743 GeneTree:ENSGT00510000047137
EMBL:FP565395 EMBL:FP565908 RefSeq:XP_003356174.1
Ensembl:ENSSSCT00000024211 Ensembl:ENSSSCT00000026616
GeneID:100624036 KEGG:ssc:100624036 Uniprot:I3LJC8
Length = 196
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 55/121 (45%), Positives = 71/121 (58%)
Query: 9 LNLLMGFLSPQID---LEYSD-GPTLPTHGSDEFRPFVRCLLE-SF--------CIGFLM 55
LNL + FLSP++D +E SD GP+LPT ++EFRPF+R L E F + +
Sbjct: 76 LNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGVLVAMVC 135
Query: 56 TFFSAFDVHVFWPIXXXXXXXXXXXXMRRQIMHMIKYRYVPFSFVKQRYDGKMPSSSDAM 115
TFF AF+V VFWPI M+RQI HMIKYRY+PF+ K+ Y GK S+
Sbjct: 136 TFFEAFNVPVFWPILVMYFVMLFCITMKRQIKHMIKYRYIPFTHGKRTYRGKEDSAKTLT 195
Query: 116 S 116
S
Sbjct: 196 S 196
>UNIPROTKB|A5PJ65 [details] [associations]
symbol:RER1 "Protein RER1" species:9913 "Bos taurus"
[GO:0030173 "integral to Golgi membrane" evidence=IEA] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IEA]
InterPro:IPR004932 Pfam:PF03248 PIRSF:PIRSF016013 GO:GO:0030173
GO:GO:0006890 eggNOG:COG5249 HOGENOM:HOG000163668 PANTHER:PTHR10743
EMBL:BC141981 EMBL:BC151447 IPI:IPI00696245 RefSeq:NP_001098962.1
UniGene:Bt.1876 STRING:A5PJ65 PRIDE:A5PJ65
Ensembl:ENSBTAT00000012259 GeneID:100125922 KEGG:bta:100125922
CTD:11079 GeneTree:ENSGT00510000047137 HOVERGEN:HBG002871
InParanoid:A5PJ65 OrthoDB:EOG4Z36FQ NextBio:20788876 Uniprot:A5PJ65
Length = 196
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 52/112 (46%), Positives = 67/112 (59%)
Query: 9 LNLLMGFLSPQID---LEYSD-GPTLPTHGSDEFRPFVRCLLE---------SFCIGFLM 55
LNL + FLSP++D +E SD GP+LPT ++EFRPF+R L E + +
Sbjct: 76 LNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVC 135
Query: 56 TFFSAFDVHVFWPIXXXXXXXXXXXXMRRQIMHMIKYRYVPFSFVKQRYDGK 107
TFF AF+V VFWPI M+RQI HMIKYRY+PF+ K+ Y GK
Sbjct: 136 TFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRTYKGK 187
>UNIPROTKB|F6XF58 [details] [associations]
symbol:RER1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR004932 Pfam:PF03248 PIRSF:PIRSF016013 GO:GO:0016021
OMA:FFDVPVF PANTHER:PTHR10743 CTD:11079
GeneTree:ENSGT00510000047137 Ensembl:ENSCAFT00000030834
EMBL:AAEX03003866 RefSeq:XP_536717.3 GeneID:479578 KEGG:cfa:479578
Uniprot:F6XF58
Length = 196
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 52/112 (46%), Positives = 66/112 (58%)
Query: 9 LNLLMGFLSPQID---LEYSD-GPTLPTHGSDEFRPFVRCLLE---------SFCIGFLM 55
LNL + FLSP++D +E SD GP+LPT ++EFRPF+R L E +
Sbjct: 76 LNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMAC 135
Query: 56 TFFSAFDVHVFWPIXXXXXXXXXXXXMRRQIMHMIKYRYVPFSFVKQRYDGK 107
TFF AF+V VFWPI M+RQI HMIKYRY+PF+ K+ Y GK
Sbjct: 136 TFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRTYKGK 187
>WB|WBGene00009783 [details] [associations]
symbol:rer-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR004932
Pfam:PF03248 PIRSF:PIRSF016013 GO:GO:0016021 GO:GO:0015031
EMBL:Z54281 eggNOG:COG5249 HOGENOM:HOG000163668 OMA:FFDVPVF
PANTHER:PTHR10743 GeneTree:ENSGT00510000047137 PIR:T22302
RefSeq:NP_495878.1 STRING:P52879 PaxDb:P52879
EnsemblMetazoa:F46C5.8.1 EnsemblMetazoa:F46C5.8.2 GeneID:174410
KEGG:cel:CELE_F46C5.8 UCSC:F46C5.8.1 CTD:174410 WormBase:F46C5.8
InParanoid:P52879 NextBio:883906 Uniprot:P52879
Length = 191
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 55/115 (47%), Positives = 66/115 (57%)
Query: 7 WMLNLLMGFLSPQID--LEYSD---GPTLPTHGSDEFRPFVRCLLE-----SFC----IG 52
+ LNL + FL+P ID LE+ D GP LP+ +DEFRPF+R L E SF I
Sbjct: 68 YYLNLFLLFLTPSIDPALEFEDEDDGPVLPSKTNDEFRPFMRRLPEFKFWHSFMKATLIA 127
Query: 53 FLMTFFSAFDVHVFWPIXXXXXXXXXXXXMRRQIMHMIKYRYVPFSFVKQRYDGK 107
TFF FDV VFWPI ++RQIMHMIKYRY+PF+ K R GK
Sbjct: 128 ITCTFFEFFDVPVFWPILVMYFFILTFLTLKRQIMHMIKYRYIPFTVGKPRMAGK 182
>ZFIN|ZDB-GENE-040426-1494 [details] [associations]
symbol:rer1 "RER1 retention in endoplasmic
reticulum 1 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR004932 Pfam:PF03248
ZFIN:ZDB-GENE-040426-1494 GO:GO:0016021 PANTHER:PTHR10743
GeneTree:ENSGT00510000047137 EMBL:BX005339 IPI:IPI00972369
Ensembl:ENSDART00000060838 ArrayExpress:F1R742 Bgee:F1R742
Uniprot:F1R742
Length = 250
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 52/112 (46%), Positives = 65/112 (58%)
Query: 9 LNLLMGFLSPQID---LEYSD-GPTLPTHGSDEFRPFVRCLLE---------SFCIGFLM 55
LNL + FLSP++D L+ D GP LPT ++EFRPF+R L E I +
Sbjct: 130 LNLFIAFLSPKVDPSLLDDPDEGPALPTKQNEEFRPFIRRLPEFKFWHSATKGIVIAMIC 189
Query: 56 TFFSAFDVHVFWPIXXXXXXXXXXXXMRRQIMHMIKYRYVPFSFVKQRYDGK 107
TFF AF+V VFWPI M+RQI HMIKYRY+PF+ K+ Y GK
Sbjct: 190 TFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYLPFTHGKRTYRGK 241
>TAIR|locus:2062185 [details] [associations]
symbol:AT2G18240 "AT2G18240" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0016021 "integral to membrane" evidence=IEA;ISS]
InterPro:IPR004932 Pfam:PF03248 PIRSF:PIRSF016013 GO:GO:0016021
EMBL:CP002685 EMBL:AC006439 eggNOG:COG5249 HOGENOM:HOG000163668
ProtClustDB:CLSN2683605 PANTHER:PTHR10743 EMBL:AK118500
EMBL:AK228424 EMBL:BT029522 EMBL:BT030063 IPI:IPI00536871
PIR:A84562 RefSeq:NP_565431.1 RefSeq:NP_849974.1 UniGene:At.20126
IntAct:Q9ZPV7 PaxDb:Q9ZPV7 PRIDE:Q9ZPV7 EnsemblPlants:AT2G18240.1
GeneID:816339 KEGG:ath:AT2G18240 TAIR:At2g18240 InParanoid:Q9ZPV7
OMA:RSAPNIV PhylomeDB:Q9ZPV7 Genevestigator:Q9ZPV7 Uniprot:Q9ZPV7
Length = 221
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 50/106 (47%), Positives = 63/106 (59%)
Query: 7 WMLNLLMGFLSPQID--LEYSDGPTLPTHGSDEFRPFVRCLLE---------SFCIGFLM 55
++LNLL+GFLSP++D LE D +LP SDE++PFVR L E +F + F+M
Sbjct: 75 YILNLLIGFLSPKVDPELEALDPDSLPVDESDEYKPFVRRLPEFKFWYAATKAFVVAFVM 134
Query: 56 TFFSAFDVHVFWPIXXXXXXXXXXXXMRRQIMHMIKYRYVPFSFVK 101
TFFS DV VFWPI M+R I+HM KYRY PF K
Sbjct: 135 TFFSFLDVPVFWPILLCYWLVLYSLTMKRLIVHMFKYRYFPFDVRK 180
>ASPGD|ASPL0000006680 [details] [associations]
symbol:AN5915 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030134 "ER to Golgi transport
vesicle" evidence=IEA] [GO:0030137 "COPI-coated vesicle"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006621 "protein
retention in ER lumen" evidence=IEA] InterPro:IPR004932
Pfam:PF03248 PIRSF:PIRSF016013 GO:GO:0016021 EMBL:BN001301
OMA:FFDVPVF PANTHER:PTHR10743 EnsemblFungi:CADANIAT00007118
Uniprot:C8V3K9
Length = 189
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 49/94 (52%), Positives = 55/94 (58%)
Query: 22 LEYSDG--PTLPTHGSDEFRPFVRCLLE---------SFCIGFLMTFFSAFDVHVFWPIX 70
LE D P+LPT DEFRPF+R L E + IGFL T+FS FD+ VFWP+
Sbjct: 93 LEDGDAGAPSLPTKQDDEFRPFIRRLPEFKFWHSATRALAIGFLCTWFSVFDIPVFWPVL 152
Query: 71 XXXXXXXXXXXMRRQIMHMIKYRYVPFSFVKQRY 104
MRRQI HMIKYRYVPFSF K RY
Sbjct: 153 VVYWILLFVLTMRRQIQHMIKYRYVPFSFGKARY 186
>CGD|CAL0003736 [details] [associations]
symbol:orf19.7202 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0030134 "ER to Golgi
transport vesicle" evidence=IEA] [GO:0030137 "COPI-coated vesicle"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006621 "protein
retention in ER lumen" evidence=IEA] InterPro:IPR004932
Pfam:PF03248 PIRSF:PIRSF016013 CGD:CAL0003736 GO:GO:0016021
eggNOG:COG5249 PANTHER:PTHR10743 EMBL:AACQ01000089
RefSeq:XP_715250.1 RefSeq:XP_888985.1 STRING:Q5A093 GeneID:3643150
GeneID:3703912 KEGG:cal:CaO19.7202 KEGG:cal:CaO19_7202
Uniprot:Q5A093
Length = 204
Score = 171 (65.3 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 41/98 (41%), Positives = 51/98 (52%)
Query: 16 LSPQIDLEYSDGPTLPTHGSDEFRPFVRCLLE-SF--------CIGFLMTFFSAFDVHVF 66
+S Q + +Y D DEFRPF+R L E F I ++TFF+ FD+ VF
Sbjct: 107 ISQQSNQKYDDDDD---DDDDEFRPFIRRLPEFKFWYNAIRATIIALILTFFNIFDIPVF 163
Query: 67 WPIXXXXXXXXXXXXMRRQIMHMIKYRYVPFSFVKQRY 104
WPI MRRQI HMIKY+Y+PF K RY
Sbjct: 164 WPILLMYFIILFTLTMRRQIQHMIKYKYLPFDLGKTRY 201
Score = 45 (20.9 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 7 WMLNLLMGFLSPQID 21
++LNL + FL+P+ D
Sbjct: 71 YLLNLFLAFLTPKFD 85
>UNIPROTKB|Q5A093 [details] [associations]
symbol:RER1 "Putative uncharacterized protein RER1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR004932 Pfam:PF03248
PIRSF:PIRSF016013 CGD:CAL0003736 GO:GO:0016021 eggNOG:COG5249
PANTHER:PTHR10743 EMBL:AACQ01000089 RefSeq:XP_715250.1
RefSeq:XP_888985.1 STRING:Q5A093 GeneID:3643150 GeneID:3703912
KEGG:cal:CaO19.7202 KEGG:cal:CaO19_7202 Uniprot:Q5A093
Length = 204
Score = 171 (65.3 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 41/98 (41%), Positives = 51/98 (52%)
Query: 16 LSPQIDLEYSDGPTLPTHGSDEFRPFVRCLLE-SF--------CIGFLMTFFSAFDVHVF 66
+S Q + +Y D DEFRPF+R L E F I ++TFF+ FD+ VF
Sbjct: 107 ISQQSNQKYDDDDD---DDDDEFRPFIRRLPEFKFWYNAIRATIIALILTFFNIFDIPVF 163
Query: 67 WPIXXXXXXXXXXXXMRRQIMHMIKYRYVPFSFVKQRY 104
WPI MRRQI HMIKY+Y+PF K RY
Sbjct: 164 WPILLMYFIILFTLTMRRQIQHMIKYKYLPFDLGKTRY 201
Score = 45 (20.9 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 7 WMLNLLMGFLSPQID 21
++LNL + FL+P+ D
Sbjct: 71 YLLNLFLAFLTPKFD 85
>FB|FBgn0039303 [details] [associations]
symbol:CG11857 species:7227 "Drosophila melanogaster"
[GO:0016192 "vesicle-mediated transport" evidence=ISS] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR004932
Pfam:PF03248 PIRSF:PIRSF016013 EMBL:AE014297 GO:GO:0016021
eggNOG:COG5249 PANTHER:PTHR10743 OMA:GKQKYSG
GeneTree:ENSGT00510000047137 RefSeq:NP_001138110.1 UniGene:Dm.11214
STRING:B7Z0Q3 PaxDb:B7Z0Q3 EnsemblMetazoa:FBtr0273256 GeneID:43042
KEGG:dme:Dmel_CG11857 FlyBase:FBgn0039303 OrthoDB:EOG441NTT
PhylomeDB:B7Z0Q3 GenomeRNAi:43042 NextBio:831936 Bgee:B7Z0Q3
Uniprot:B7Z0Q3
Length = 242
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 47/118 (39%), Positives = 62/118 (52%)
Query: 16 LSPQIDLEYS-----DGPTLPTHGSDEFRPFVRCLLE---------SFCIGFLMTFFSAF 61
+ P+ D YS +GP LPT ++EFRPF+R L E S IG + TFF F
Sbjct: 83 IDPEFD-PYSQDDEDEGPNLPTRSNEEFRPFIRRLPEFKFWLSVAKSTLIGLICTFFDFF 141
Query: 62 DVHVFWPIXXXXXXXXXXXXMRRQIMHMIKYRYVPFSFVKQRYDGKMPSSSDAMSTDD 119
+V VFWPI M+RQI HMIKY+Y+PF+ K RY + + A + D
Sbjct: 142 NVPVFWPILVMYFITLFCITMKRQIKHMIKYKYLPFTRNKPRYQRTSDTRATAAGSGD 199
Score = 101 (40.6 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 9 LNLLMGFLSPQIDLE---YS-----DGPTLPTHGSDEFRPFVRCLLE 47
LNL + FL+P+ID E YS +GP LPT ++EFRPF+R L E
Sbjct: 72 LNLFIAFLTPKIDPEFDPYSQDDEDEGPNLPTRSNEEFRPFIRRLPE 118
>UNIPROTKB|G4N8F0 [details] [associations]
symbol:MGG_06273 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR004932 Pfam:PF03248 PIRSF:PIRSF016013 GO:GO:0016021
EMBL:CM001234 PANTHER:PTHR10743 RefSeq:XP_003717317.1
EnsemblFungi:MGG_06273T0 GeneID:2684428 KEGG:mgr:MGG_06273
Uniprot:G4N8F0
Length = 190
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 44/96 (45%), Positives = 54/96 (56%)
Query: 20 IDLEYSDGPT--LPTHGSDEFRPFVRCLLE---------SFCIGFLMTFFSAFDVHVFWP 68
+D + DG LPT +EFRPF+R L E + IGFL ++F F+V VFWP
Sbjct: 90 LDNDMEDGAVGGLPTKQDEEFRPFIRRLPEFKFWHAATRAIVIGFLCSWFEVFNVPVFWP 149
Query: 69 IXXXXXXXXXXXXMRRQIMHMIKYRYVPFSFVKQRY 104
+ MR+QI HMIKYRYVPFSF K RY
Sbjct: 150 VLVMYWFILFFLTMRKQIQHMIKYRYVPFSFGKARY 185
>SGD|S000000507 [details] [associations]
symbol:RER1 "Protein involved in retention of membrane
proteins" species:4932 "Saccharomyces cerevisiae" [GO:0030137
"COPI-coated vesicle" evidence=IMP;IDA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP;IDA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA;ISM] [GO:0003674 "molecular_function" evidence=ND]
[GO:0030134 "ER to Golgi transport vesicle" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006621 "protein retention
in ER lumen" evidence=IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IPI] InterPro:IPR004932
Pfam:PF03248 PIRSF:PIRSF016013 SGD:S000000507 GO:GO:0016021
GO:GO:0000139 EMBL:X59720 EMBL:BK006937 GO:GO:0006888 GO:GO:0006621
GO:GO:0030137 GO:GO:0006890 GO:GO:0030134 eggNOG:COG5249
HOGENOM:HOG000163668 PANTHER:PTHR10743 OMA:TRRSDEY
GeneTree:ENSGT00510000047137 OrthoDB:EOG4N8VF5 EMBL:D28552
PIR:S50158 RefSeq:NP_009925.1 ProteinModelPortal:P25560
STRING:P25560 TCDB:9.B.82.1.1 PaxDb:P25560 EnsemblFungi:YCL001W
GeneID:850354 KEGG:sce:YCL001W CYGD:YCL001w NextBio:965821
Genevestigator:P25560 GermOnline:YCL001W Uniprot:P25560
Length = 188
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 43/111 (38%), Positives = 58/111 (52%)
Query: 7 WMLNLLMGFLSPQIDLEYS---DGPTLPT-HGSDEFRPFVRCLLE-SF--------CIGF 53
++LN + FL+P+ D+ + L S+EFRPF+R L E F I
Sbjct: 73 FLLNQFLAFLTPKFDMSLQQDEENNELEAGEKSEEFRPFIRRLPEFKFWYNSIRATVISL 132
Query: 54 LMTFFSAFDVHVFWPIXXXXXXXXXXXXMRRQIMHMIKYRYVPFSFVKQRY 104
L++ FS FD+ VFWPI MRRQI HMIKYRY+P K++Y
Sbjct: 133 LLSLFSIFDIPVFWPILLMYFILLFFLTMRRQIQHMIKYRYIPLDIGKKKY 183
>POMBASE|SPAC22E12.05c [details] [associations]
symbol:rer1 "Rer1 family protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006621 "protein retention in ER lumen" evidence=ISS]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISS]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030134 "ER to Golgi transport vesicle" evidence=ISS]
[GO:0030137 "COPI-coated vesicle" evidence=ISS] InterPro:IPR004932
Pfam:PF03248 PIRSF:PIRSF016013 PomBase:SPAC22E12.05c GO:GO:0016021
GO:GO:0006886 GO:GO:0000139 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0006888 GO:GO:0006621 GO:GO:0030137 GO:GO:0006890
GO:GO:0030134 eggNOG:COG5249 HOGENOM:HOG000163668 OMA:FFDVPVF
PANTHER:PTHR10743 PIR:T38162 RefSeq:NP_594831.1 STRING:Q10358
EnsemblFungi:SPAC22E12.05c.1 GeneID:2541774 KEGG:spo:SPAC22E12.05c
OrthoDB:EOG4N8VF5 NextBio:20802865 Uniprot:Q10358
Length = 184
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 40/93 (43%), Positives = 48/93 (51%)
Query: 21 DLEYSDGPTLPTHGSDEFRPFVRCLLE-SF--------CIGFLMTFFSAFDVHVFWPIXX 71
D E +G LPT DEFRPF+R L E F + +FF FDV VFWPI
Sbjct: 90 DEEIEEG-VLPTSKDDEFRPFIRRLPEFKFWYSSMRATLFALVASFFRIFDVPVFWPILV 148
Query: 72 XXXXXXXXXXMRRQIMHMIKYRYVPFSFVKQRY 104
RRQI HM+KYRYVPF K+++
Sbjct: 149 VYYLVLSFFCFRRQIQHMLKYRYVPFDIGKKKF 181
>DICTYBASE|DDB_G0292588 [details] [associations]
symbol:rer1 "retention in endoplasmic reticulum 1
homolog" species:44689 "Dictyostelium discoideum" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR004932 Pfam:PF03248
PIRSF:PIRSF016013 dictyBase:DDB_G0292588 GO:GO:0016021
GenomeReviews:CM000155_GR EMBL:AAFI02000194 GO:GO:0015031
eggNOG:COG5249 PANTHER:PTHR10743 OMA:RSAPNIV RefSeq:XP_629510.1
STRING:Q54D10 EnsemblProtists:DDB0266508 GeneID:8628761
KEGG:ddi:DDB_G0292588 Uniprot:Q54D10
Length = 188
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 41/112 (36%), Positives = 56/112 (50%)
Query: 7 WMLNLLMGFLSPQID--LEYSDGPTLPT---HGSDEFRPFVRCLLE---------SFCIG 52
++L + FLSP+ D LE G +LPT DE +PF+R L E + I
Sbjct: 72 FLLTRFIAFLSPKWDPELEEDSGDSLPTTLNRNDDEAKPFIRRLPEFLFWHSIFKALFIS 131
Query: 53 FLMTFFSAFDVHVFWPIXXXXXXXXXXXXMRRQIMHMIKYRYVPFSFVKQRY 104
TF D+ VFWPI M++QI HMIKY+Y+PF+ K+ Y
Sbjct: 132 IFCTFIPFLDLPVFWPILLLYFIIIFSVTMKKQIKHMIKYKYIPFTVGKKTY 183
>UNIPROTKB|Q5T092 [details] [associations]
symbol:RER1 "Protein RER1" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR004932
Pfam:PF03248 PIRSF:PIRSF016013 GO:GO:0016021 EMBL:AL513477
HOGENOM:HOG000163668 PANTHER:PTHR10743 HOVERGEN:HBG002871
UniGene:Hs.741204 HGNC:HGNC:30309 ChiTaRS:RER1 IPI:IPI00647194
Ensembl:ENST00000443438 Uniprot:Q5T092
Length = 158
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 35/74 (47%), Positives = 46/74 (62%)
Query: 9 LNLLMGFLSPQID---LEYSD-GPTLPTHGSDEFRPFVRCLLE---------SFCIGFLM 55
LNL + FLSP++D +E SD GP+LPT ++EFRPF+R L E + +
Sbjct: 76 LNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVC 135
Query: 56 TFFSAFDVHVFWPI 69
TFF AF+V VFWPI
Sbjct: 136 TFFDAFNVPVFWPI 149
>UNIPROTKB|E2R2Q8 [details] [associations]
symbol:RER1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030173 "integral to Golgi membrane"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] InterPro:IPR004932 Pfam:PF03248
PIRSF:PIRSF016013 GO:GO:0030173 GO:GO:0006890 PANTHER:PTHR10743
Ensembl:ENSCAFT00000030834 Uniprot:E2R2Q8
Length = 158
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 35/74 (47%), Positives = 45/74 (60%)
Query: 9 LNLLMGFLSPQID---LEYSD-GPTLPTHGSDEFRPFVRCLLE---------SFCIGFLM 55
LNL + FLSP++D +E SD GP+LPT ++EFRPF+R L E +
Sbjct: 76 LNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMAC 135
Query: 56 TFFSAFDVHVFWPI 69
TFF AF+V VFWPI
Sbjct: 136 TFFEAFNVPVFWPI 149
>UNIPROTKB|Q5T091 [details] [associations]
symbol:RER1 "Protein RER1" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR004932
Pfam:PF03248 PIRSF:PIRSF016013 GO:GO:0016021 EMBL:CH471183
EMBL:AL513477 PANTHER:PTHR10743 UniGene:Hs.741204 HGNC:HGNC:30309
ChiTaRS:RER1 IPI:IPI00154352 Ensembl:ENST00000378512
UCSC:uc001ajf.2 HOGENOM:HOG000139626 Uniprot:Q5T091
Length = 187
Score = 108 (43.1 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 24/43 (55%), Positives = 32/43 (74%)
Query: 9 LNLLMGFLSPQID---LEYSD-GPTLPTHGSDEFRPFVRCLLE 47
LNL + FLSP++D +E SD GP+LPT ++EFRPF+R L E
Sbjct: 76 LNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPE 118
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.332 0.145 0.493 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 134 122 0.00091 102 3 11 21 0.40 30
29 0.49 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 602 (64 KB)
Total size of DFA: 148 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.81u 0.10s 10.91t Elapsed: 00:00:01
Total cpu time: 10.81u 0.10s 10.91t Elapsed: 00:00:01
Start: Mon May 20 21:39:30 2013 End: Mon May 20 21:39:31 2013