Query 048175
Match_columns 134
No_of_seqs 109 out of 192
Neff 3.1
Searched_HMMs 13730
Date Mon Mar 25 12:04:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048175.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/048175hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2pifa1 d.382.1.1 (A:7-262) Un 21.4 6.3 0.00046 30.6 -1.0 7 62-68 219-225 (256)
2 d1dlca3 f.1.3.1 (A:61-289) del 17.0 1.2E+02 0.0084 21.4 5.4 46 49-94 8-61 (229)
3 d1veha_ d.52.8.1 (A:) HIRA-int 15.6 34 0.0025 21.9 1.8 19 78-97 61-79 (92)
4 d1nb5i_ d.17.1.2 (I:) Cystatin 13.1 34 0.0025 22.6 1.3 16 116-131 55-70 (98)
5 d1u84a_ a.230.1.1 (A:) hypothe 13.0 51 0.0037 21.4 2.1 23 81-104 3-25 (81)
6 d1k8ba_ d.241.1.1 (A:) Transla 11.6 39 0.0029 19.6 1.1 14 79-92 18-31 (52)
7 d1b77a1 d.131.1.2 (A:1-110) gp 9.6 27 0.0019 23.4 -0.3 21 4-24 52-73 (110)
8 d1stfi_ d.17.1.2 (I:) Cystatin 9.4 54 0.0039 21.5 1.3 16 116-131 55-70 (98)
9 d1isua_ g.35.1.1 (A:) HIPIP (h 9.3 75 0.0055 19.6 1.9 35 87-123 7-46 (62)
10 d1hx0a2 c.1.8.1 (A:1-403) Anim 8.2 51 0.0037 23.6 0.8 10 84-93 389-398 (403)
No 1
>d2pifa1 d.382.1.1 (A:7-262) Uncharacterized protein PSTPO5379 {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=21.43 E-value=6.3 Score=30.63 Aligned_cols=7 Identities=57% Similarity=1.422 Sum_probs=5.3
Q ss_pred ccchhhH
Q 048175 62 DVHVFWP 68 (134)
Q Consensus 62 DIPVFWP 68 (134)
||||||+
T Consensus 219 evPVFWa 225 (256)
T d2pifa1 219 EVPVFWA 225 (256)
T ss_dssp EEEEEEE
T ss_pred CcceEee
Confidence 4888885
No 2
>d1dlca3 f.1.3.1 (A:61-289) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis tenebrionis, CRYIIIA (BT13) [TaxId: 1444]}
Probab=17.04 E-value=1.2e+02 Score=21.40 Aligned_cols=46 Identities=11% Similarity=0.048 Sum_probs=24.8
Q ss_pred HHHHHHhhhhcccccchhhHHHHHHHHHHH--------HHHHHHHHHHHHHhcc
Q 048175 49 FCIGFLMTFFSAFDVHVFWPILLFYWLTLF--------TLTMRRQIMHMIKYRY 94 (134)
Q Consensus 49 ~~ia~~~TfF~~fDIPVFWPILl~YFi~Lf--------~lTMrrqI~HMIKYkY 94 (134)
+.++++.|....+-+|+.=+++-++..++= .=.|.+|++.||..+=
T Consensus 8 ~~~~i~~~il~~~~~P~~g~~~~~~~~i~~~lwP~~~~w~~~~~~ve~lId~~i 61 (229)
T d1dlca3 8 KGISVVGDLLGVVGFPFGGALVSFYTNFLNTIWPSEDPWKAFMEQVEALMDQKI 61 (229)
T ss_dssp HHHHHHHHHTTSCBSCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHH
Confidence 445555555555556665444332222211 2257888888886653
No 3
>d1veha_ d.52.8.1 (A:) HIRA-interacting protein 5, HIRIP5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=15.62 E-value=34 Score=21.93 Aligned_cols=19 Identities=26% Similarity=0.679 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHhcccCC
Q 048175 78 FTLTMRRQIMHMIKYRYVPF 97 (134)
Q Consensus 78 f~lTMrrqI~HMIKYkYvPf 97 (134)
-..|+|..|++|+|+ ++|-
T Consensus 61 s~~Tlk~~Ie~~L~~-~vpe 79 (92)
T d1veha_ 61 SIITLKSGIQNMLQF-YIPE 79 (92)
T ss_dssp HHHHTHHHHHHHHHH-HCSS
T ss_pred HHHHHHHHHHHHHHH-HCCC
Confidence 457999999999998 5574
No 4
>d1nb5i_ d.17.1.2 (I:) Cystatin A (stefin A) {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.09 E-value=34 Score=22.64 Aligned_cols=16 Identities=25% Similarity=0.445 Sum_probs=13.3
Q ss_pred CcCCcCceeeEeEEee
Q 048175 116 STDDWGGACYIHIVLF 131 (134)
Q Consensus 116 ~~~~~~~~~~~~~~~~ 131 (134)
-+-+.|+-||+|+-.|
T Consensus 55 IKV~vG~~~~vHlrVf 70 (98)
T d1nb5i_ 55 IKVRAGDNKYMHLKVF 70 (98)
T ss_dssp EEEECSSSCEEEEEEE
T ss_pred EEEEeCCCcEEEEEEe
Confidence 4678899999999775
No 5
>d1u84a_ a.230.1.1 (A:) hypothetical protein YugE {Bacillus stearothermophilus [TaxId: 1422]}
Probab=13.00 E-value=51 Score=21.36 Aligned_cols=23 Identities=26% Similarity=0.576 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHhcccCCccccccc
Q 048175 81 TMRRQIMHMIKYRYVPFSFVKQRY 104 (134)
Q Consensus 81 TMrrqI~HMIKYkYvPf~~gK~~Y 104 (134)
.|.|+.-|+|| ++-||-.|...|
T Consensus 3 ~~n~~m~~~i~-~WDPF~~G~d~Y 25 (81)
T d1u84a_ 3 QLNRLLLEWIG-AWDPFGLGKDAY 25 (81)
T ss_dssp HHHHHHHHHHH-HHCTTSSCGGGG
T ss_pred HHHHHHHHHHH-ccCCcccCccch
Confidence 37788888888 689999999988
No 6
>d1k8ba_ d.241.1.1 (A:) Translation initiation factor 2 beta, aIF2beta, N-terminal domain {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=11.63 E-value=39 Score=19.60 Aligned_cols=14 Identities=21% Similarity=0.325 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHh
Q 048175 79 TLTMRRQIMHMIKY 92 (134)
Q Consensus 79 ~lTMrrqI~HMIKY 92 (134)
+-.|+|.-+|+.||
T Consensus 18 ~~~L~R~p~hv~kf 31 (52)
T d1k8ba_ 18 AKAVNRDEEFFAKY 31 (52)
T ss_dssp HHHHHTCHHHHHHH
T ss_pred HHHhCCCHHHHHHH
Confidence 55789999999987
No 7
>d1b77a1 d.131.1.2 (A:1-110) gp45 sliding clamp {Bacteriophage RB69 [TaxId: 12353]}
Probab=9.58 E-value=27 Score=23.37 Aligned_cols=21 Identities=29% Similarity=0.301 Sum_probs=17.3
Q ss_pred hhHHHHHHHHhhcCCC-CCCCC
Q 048175 4 INHWMLNLLMGFLSPQ-IDLEY 24 (134)
Q Consensus 4 LgIYlLnlfi~FLtPk-~Dp~~ 24 (134)
.|||=||.||+-|+=. -||++
T Consensus 52 faIYDL~eFL~~lsL~~~~p~l 73 (110)
T d1b77a1 52 VALYDLNSFLSILSLVSDDAEI 73 (110)
T ss_dssp EEESCHHHHHHHHTTSCTTCEE
T ss_pred eeeeeHHHHHhHHhhccCCCcc
Confidence 5899999999999876 36765
No 8
>d1stfi_ d.17.1.2 (I:) Cystatin B (stefin B) {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.37 E-value=54 Score=21.48 Aligned_cols=16 Identities=19% Similarity=0.428 Sum_probs=12.9
Q ss_pred CcCCcCceeeEeEEee
Q 048175 116 STDDWGGACYIHIVLF 131 (134)
Q Consensus 116 ~~~~~~~~~~~~~~~~ 131 (134)
-+-+.|+-||+|+-.|
T Consensus 55 IKV~vg~~~~~HlrV~ 70 (98)
T d1stfi_ 55 IKVHVGDEDFVHLRVF 70 (98)
T ss_dssp EEEECSSSCEEEEEEE
T ss_pred EEEEeCCCcEEEEEEe
Confidence 3667899999999765
No 9
>d1isua_ g.35.1.1 (A:) HIPIP (high potential iron protein) {Rhodocyclus tenuis [TaxId: 1066]}
Probab=9.28 E-value=75 Score=19.61 Aligned_cols=35 Identities=14% Similarity=0.090 Sum_probs=24.3
Q ss_pred HHHHHhcccCCccccc-----ccCCCCCCCCCCCCcCCcCce
Q 048175 87 MHMIKYRYVPFSFVKQ-----RYDGKMPSSSDAMSTDDWGGA 123 (134)
Q Consensus 87 ~HMIKYkYvPf~~gK~-----~Y~~~~~~~~~~~~~~~~~~~ 123 (134)
|-+.+|.-.|-+ ||+ .|...+ |++..+-++-++|.
T Consensus 7 r~a~~YQDspk~-gk~C~~Ca~fip~~-S~~~~G~CKvI~G~ 46 (62)
T d1isua_ 7 RKAFNYQDTAKN-GKKCSGCAQFVPGA-SPTAAGGCKVIPGD 46 (62)
T ss_dssp HHHTTCBSSCBT-TBCGGGBTTEECCS-STTSCBEETTSTTC
T ss_pred HHhhccccCCCC-CCccccceeeccCC-CcccCCcceEccCC
Confidence 457789999988 765 354444 66677778878774
No 10
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=8.24 E-value=51 Score=23.62 Aligned_cols=10 Identities=40% Similarity=0.787 Sum_probs=7.2
Q ss_pred HHHHHHHHhc
Q 048175 84 RQIMHMIKYR 93 (134)
Q Consensus 84 rqI~HMIKYk 93 (134)
|||+.|++.|
T Consensus 389 ~~i~~m~~fr 398 (403)
T d1hx0a2 389 REIRNMVWFR 398 (403)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 5777777765
Done!